BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3345
(787 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|14488165|emb|CAC42098.1| RBD protein [Chironomus tentans]
Length = 849
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 332/841 (39%), Positives = 480/841 (57%), Gaps = 124/841 (14%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++L+ FE+KG VTDVQLKY +GKFR+F FIGY E AQ A++YFN+T+ +S+I
Sbjct: 13 VNEQKLRKLFEQKGPVTDVQLKYK-DGKFRQFGFIGYENEGSAQEAVNYFNDTFFGTSKI 71
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKK-------S 141
KVE C+ LGD +KPKSWSKYA DS A+ K N KQ K E + KK
Sbjct: 72 KVEVCAALGDESKPKSWSKYAKDSEAFIK-KNEKSKQPEKDEVEDEKSKIKKIDAIINEY 130
Query: 142 KNDPTFSDFLQLHGKDVSKLL------PLSNKDGEEKEEENEDESNNQIAHADISDMEYL 195
K DP F +F++ H KD KL+ + D +E+++E E + ++A+ +ISD EY+
Sbjct: 131 KEDPEFQEFMKSHAKD--KLIWENDVNTGTKVDQDEQKDEEESGDDTKLANQEISDAEYM 188
Query: 196 KLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT 255
K + D S K + + +TI V+N+P +K+++LK +F+P SVR
Sbjct: 189 KKLMGTSDETES----ISFEKKTKNLIKLYTIKVRNIPKKLKREELKKFFRPSKAHSVRI 244
Query: 256 -TFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMEN 314
Y+GFK E++ +AL+K+KSF KGKQ+++Y+++ ++ N+
Sbjct: 245 PKNSNFGYVGFKLERDMKRALSKDKSFLKGKQIHVYEFTHQKEESEVKSSKINS------ 298
Query: 315 IKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET 374
W+ QE+ ++ EDI ESG++F RNL YTVTEDD+ +FEKYG + EV +PID T
Sbjct: 299 ----RWQEQEEKLKGEEDICESGKLFFRNLPYTVTEDDVQTVFEKYGNVVEVNVPIDPTT 354
Query: 375 DKTKGFALVTFLMPEHATQAYQHLDG---------------------------------- 400
K KGF VTFLMPE+A QAY L+G
Sbjct: 355 RKIKGFGTVTFLMPENAVQAYNELNGTMFHGRMFHLLPGKSNDKTEADESDPKNFKDKRR 414
Query: 401 --------------TVFLG-----RMLHLIPGKPKE-----NEGNVDGKVHCCISER--- 433
T+F+G ++ + GK KE + G V + E
Sbjct: 415 KELKKTASSAHNWNTLFMGTNAVAEIISKVYGKSKEEVLESSTGGSGAAVRLALGETQAV 474
Query: 434 ------------KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP 481
+L++F+ RSK IILVKNLP T ++K+ FE FG L +V++PP
Sbjct: 475 LDMKTFLEKHGVRLESFDDQKVKRSKTIILVKNLPANTDVEEMKSKFEQFGVLDKVVLPP 534
Query: 482 YGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEE 541
+T L++F ++A+ AF LAY+KFK VPLYLEWAPE VF ++K+E+
Sbjct: 535 NSVTCLIKFADPSEARKAFKKLAYSKFKHVPLYLEWAPENVF-----------RDKDEDI 583
Query: 542 GEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHF 601
E E K+E+ ED + EV+++ PEP+TTL+IKNLN ++ E++IR F
Sbjct: 584 EENVNEAKEESAQNEDKNKEEEEVDDSA-------PEPNTTLFIKNLNKDTVEETIREIF 636
Query: 602 KKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKR 661
K G I S+ +A+KK + + +GYGF+QF + ++ALK +Q+ +D +IELKR
Sbjct: 637 KNIGTIRSIQIAKKKSTDDEKKLIPLGYGFIQFKQASAADKALKTMQHKEIDGIKIELKR 696
Query: 662 SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM 721
S+R L + A ++K+ N ++ +KI+VRNIPFQA +E+ +LF+ FGELK VRLPKK
Sbjct: 697 SDRTLNTPAHVSRKKTDNKKQEGSTKIMVRNIPFQANANEIRQLFQVFGELKAVRLPKK- 755
Query: 722 VGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGF++F+TK++AK A AL STHLYGRRLVLEWA ++V +IRKRT +
Sbjct: 756 PGIDQHRGFGFIDFVTKSDAKSAFDALHHSTHLYGRRLVLEWAATEEDVTEIRKRTAKDV 815
Query: 782 G 782
G
Sbjct: 816 G 816
>gi|157104329|ref|XP_001648356.1| RNA binding motif protein [Aedes aegypti]
gi|108880340|gb|EAT44565.1| AAEL004075-PA [Aedes aegypti]
Length = 860
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 326/843 (38%), Positives = 460/843 (54%), Gaps = 118/843 (13%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+ +L+ F + G VTD+QLKYT EGKFR F FIGY EDQA A+ +FNNT++ +S+I
Sbjct: 13 ITESKLRDHFSQCGIVTDIQLKYTPEGKFRNFGFIGYETEDQASKAISHFNNTFLRTSKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG---KKSKNDP 145
V C+ L + K WSKY+ + L +KP K +K KNDP
Sbjct: 73 SVAPCAALNEAKSLKVWSKYSKSKQDVKDLQKQLEDVTVKPIKKKGETAEDILQKHKNDP 132
Query: 146 TFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTA 205
F +F+Q+ K + + D + ++ ++E + + +K
Sbjct: 133 LFKEFVQVQNKAGTAVW-----DNQLQQTDSEGSGSEDEPEEQEPEKSEIK--------- 178
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT--TFLGMAYI 263
+PSV K + + + N+P+ K++DL +FKP+ S+R G AY+
Sbjct: 179 -KEPSVD--KKKELKVANLFVVKIHNIPSKTKRQDLLRFFKPVKPYSIRIPPKQKGFAYV 235
Query: 264 GFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
G+K E KAL K+KSF GKQ+ + ++ + + + + + EN K W Q
Sbjct: 236 GYKTEGELKKALLKDKSFLGGKQVKVVDFTAKD--RLRSEEEKSQLSKKENPK---WIRQ 290
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
++SV +E I E+G++F RNL+Y+V EDDL +LFEKYGP+AE+ LPID T K KGF +V
Sbjct: 291 KESV-CSESIIETGKLFFRNLAYSVKEDDLKQLFEKYGPVAEIDLPIDSNTRKLKGFGMV 349
Query: 384 TFLM------------------------PEHATQAYQHLD-------------------- 399
TFLM P + Q +D
Sbjct: 350 TFLMPEHAVQAYSELNGTFFHGRMFHLLPAKIDETKQEVDEDDASLNFKQKKELKLKKTA 409
Query: 400 ------GTVFLGR--MLHLIP---GKPKE----NEGNVDGKVHCCISERK---------- 434
T+F+G + ++ GK KE EG V + E +
Sbjct: 410 QSSHNWNTLFMGENAIAEVVAKKYGKTKEEVLSTEGTTSAAVRLALGETEIVSEMRQFLV 469
Query: 435 -----LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVE 489
LDAFN V +ARS I+ KNLP T +LK F+ FG LGRV++PP G++ ++E
Sbjct: 470 DNGIHLDAFNGVPKARSNTTIIAKNLPAATELNELKERFDKFGLLGRVILPPSGVSAVIE 529
Query: 490 FLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE----AKEKSKGKEKEKNEEEGEEG 545
FL ++AK AF LAY++FK +PLYLEWAPE +FA+ KE ++G+ + + +
Sbjct: 530 FLDPSEAKKAFKKLAYSRFKSLPLYLEWAPENIFAKPNTSVKEDTEGESTKIKKPKAPPK 589
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
+E+ E + VE +E + PE TTL++KNL+F + E+SIR F+ G
Sbjct: 590 DEQ-------ELKEPMPEPVEPEKDEYSDLSPEEGTTLFLKNLSFQTNEESIRETFRNMG 642
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRN 665
PI SV V R+KD G+ S GYGF+QF R+S + ALK LQ+ +D ++EL RS+R
Sbjct: 643 PIHSVQVVRRKDG---GKNESRGYGFIQFKLRKSADSALKNLQSVHIDGRKVELSRSDRT 699
Query: 666 LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 725
L +EA T RK+S + KQTG+KILVRN+PFQA E+ +LFK FGELK VRLP+KMV S
Sbjct: 700 LNTEADTHGRKASKLKKQTGTKILVRNVPFQANAKEIRDLFKVFGELKSVRLPRKMVSSA 759
Query: 726 --LHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGT 783
HRGF FV+F+T+N+AK+A +ALCQSTHLYGRRLVLEWAE D VE++RKRT F
Sbjct: 760 DESHRGFCFVDFVTENDAKQAFEALCQSTHLYGRRLVLEWAEADDGVEELRKRTAEKFAG 819
Query: 784 AVG 786
G
Sbjct: 820 TSG 822
>gi|449477354|ref|XP_002196178.2| PREDICTED: probable RNA-binding protein 19 [Taeniopygia guttata]
Length = 944
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 329/924 (35%), Positives = 465/924 (50%), Gaps = 194/924 (20%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LKYT +G+FR+F FIGY ED+AQAAL++FN +++ +SR+
Sbjct: 13 MKEERFRKLFAAFGTLTDCCLKYTKDGRFRKFGFIGYKSEDEAQAALNHFNKSFIDTSRL 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQK-----LHNIAPKQDLKPEHTKDSKPG-KKSK 142
VE C + GD TKPK+WSK++ + A +K L + AP K + KD+ K+ K
Sbjct: 73 TVELCKSFGDPTKPKAWSKHSQKAPASEKQTKEPLASAAPAGTKKGKKKKDAVDNLKELK 132
Query: 143 NDPTFSDFLQLHGKDV------------------SKLLPLSNKDGEEKEE--ENEDESNN 182
D TF +FL +H K S N D +E EE E DE +
Sbjct: 133 EDKTFQEFLVVHQKRSQVATWANDTLAEEPKKGKSSAADYLNFDSDESEELSEGGDEPSE 192
Query: 183 Q-------------IAHADISDMEYLKLK---------------------------TKSK 202
D+SDM+YLK K +
Sbjct: 193 DEEEIKGKKEGKKAATSKDLSDMDYLKSKVVKDSSSSSSTEEETETEEEESETEEDSGIA 252
Query: 203 DTAPSDPSVPPVS----KAPVHKRQYH-----------------TIVVKNLPAGVKKKDL 241
+T P P K P K++ T+ ++ P+ + ++ +
Sbjct: 253 ETPPEKRGKPKAQQTEQKTPAGKKKKRSTLEVHQASPGEASTAFTVKLRGAPSSITEEKI 312
Query: 242 KAYFKPLPLASVRT------TFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKD 295
+ +F PL ++R G ++ K E +AL + K F G+ + + +
Sbjct: 313 REFFFPLKPVAIRMGKKAQGKNSGYIFVDLKSEAEMQRALKRKKEFLGGRCVEVSRC--- 369
Query: 296 NSAKYSGAADDNNNASMENIKAKH----WKSQEDSVQFAEDIAESGRIFVRNLSYTVTED 351
N E + AK W+ + ED++ESGR+FVRNL +T TE+
Sbjct: 370 ------------RNTPKEPVPAKPEHQPWQRTLRDDEEEEDLSESGRLFVRNLPFTSTEE 417
Query: 352 DLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLI 411
DL K+F KYGPL+E+ PIDK T K KGFA +T+++PEHA +A LDG VF GRM+HL+
Sbjct: 418 DLEKIFSKYGPLSEIHFPIDKLTKKPKGFAFITYMIPEHAVKALAELDGQVFQGRMMHLL 477
Query: 412 PG---KPKENEGNVD------------------------------GKVHCCISERKLDAF 438
P K K +G+ + V ++++ A
Sbjct: 478 PSTIRKEKIEDGDAEESSSYKKSKEAKDKANSASSHNWNALFVGTNAVADAMAQKYNAAK 537
Query: 439 NQVVEARSK------------------RIILVKN------------------LPYRTLPT 462
+QV++A SK R LV+N + + LP
Sbjct: 538 SQVLDAESKDSVAVRVALGETELVQEIRRFLVENGVSLDSFSQAAGERSKTVILVKNLPA 597
Query: 463 DLKA-----LFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEW 517
A LF G LGRVL+P GIT +VEFL+ +AK AF LAY+KF VPLYLEW
Sbjct: 598 GTSALELEQLFGHHGGLGRVLLPEGGITAIVEFLEPTEAKQAFTRLAYSKFHSVPLYLEW 657
Query: 518 APEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREP 577
AP GVF S +K+K G+E E A +D+++ + EE EE+EE E
Sbjct: 658 APMGVFL-----SPAPQKKKAGVPGKEDEAGLVPGEATKDSEEAAAQEEEEEEEEEEEEN 712
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
P TL+IKNLNF +TED+++ F K G + S T+++KKD G LSMG+GFV++
Sbjct: 713 IPGCTLFIKNLNFATTEDTLKETFSKVGALKSCTISKKKD--KAGTLLSMGFGFVEYKKP 770
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
ES +AL+ LQ ++D H++E+K S R + A RK KQ SKILVRNIPFQA
Sbjct: 771 ESAQKALRQLQGCTVDGHKLEVKLSERAVRP-AVKSTRKKQIAKKQKTSKILVRNIPFQA 829
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
E+ ELF FGELK VRLPKKM G+G HRGFGFV+F+TK +AK+A +ALC STHLYGR
Sbjct: 830 TVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFVTKQDAKKAFQALCHSTHLYGR 889
Query: 758 RLVLEWAEEADNVEDIRKRTNRYF 781
RLVLEWA+ + +E +R++T ++F
Sbjct: 890 RLVLEWADTEETLEALRRKTAQHF 913
>gi|392332679|ref|XP_003752658.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 846
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 309/860 (35%), Positives = 443/860 (51%), Gaps = 166/860 (19%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++ + F GT+TD LK+T EGKFR+F FIG+ E++AQAAL++F+ +++ +SRI
Sbjct: 13 MKEDRFRQLFAAFGTLTDCSLKFTKEGKFRKFGFIGFKSEEEAQAALNHFHRSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG-------KKS 141
VE C + GD +KP++WSK+A S ++ P QD P TK K +K
Sbjct: 73 TVEFCKSFGDPSKPRAWSKHAQKPSQPKQ-----PSQDSIPSDTKKDKKKKKVPSDLEKL 127
Query: 142 KNDPTFSDFLQLHGKDV----------------SKLLPL---------SNKD-GEEKEEE 175
K D F +FL +H K +K P SN D G+E EEE
Sbjct: 128 KEDAEFQEFLSIHQKRTQVATWANDALEAELPKAKAKPSSDYLNFDSDSNSDSGQESEEE 187
Query: 176 -----NEDESNNQIAHA---DISDMEYLKLKTKSKDT----------------------- 204
E+E Q A ++SDM+YLK K +
Sbjct: 188 PAGEDGEEEQGLQPKAAVQKELSDMDYLKSKMVRAEVSSEDEDKEDSEDEAVNCEEGSEA 247
Query: 205 -----APSDP-------------SVPPVSKA-----PVHKRQYHT---IVVKNLPAGVKK 238
+P+ P S+ P A P +++ T + ++ P V +
Sbjct: 248 EEEEGSPTCPAQQAGVNRGAVLGSLRPQEAAGKVEKPASQKEPTTPYTVKLRGAPFNVTE 307
Query: 239 KDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKY 292
K++ + PL ++R G ++ E+ KAL N+ + G+ + +++
Sbjct: 308 KNVLEFLAPLKPVAIRIVRNAHGNKTGYVFVDLSSEEEVKKALKCNREYMGGRYIEVFRE 367
Query: 293 SKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ ++A+ GA ++ +H + ED+A+SGR+FVRNLSYT +E+D
Sbjct: 368 KQASAAR--GAPKSSSAPWQGRTLGEHEEE--------EDLADSGRLFVRNLSYTSSEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF YG + +TKG V + E TQ Q + FL
Sbjct: 418 LEKLFSAYGTCGLRL--------ETKGSVAVRMALGE--TQLVQEVRS--FL-------- 457
Query: 413 GKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
+D V C LD+F+Q RSK +IL KNLP TL +L+ +F FG
Sbjct: 458 ---------IDNGV-C------LDSFSQAAAERSKTVILAKNLPAGTLAAELQEIFSRFG 501
Query: 473 DLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKG 532
LGRVL+P GIT +VEFL+ +A+ AF LAY+KF VPLYLEWAP GVF A +K
Sbjct: 502 SLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVFGAAPQK--- 558
Query: 533 KEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEE-----------NVEEDEEREPEPDT 581
K+ E+ + E ++E + ++ + E E EE+EE E P
Sbjct: 559 --KDSQPEQPAQKAEAEQETVLNPEGEKALVEGAEASMGKMEEEEEEEEEEEEEESIPGC 616
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL+IKNLNFN+TE++++ F + G + S T+++KK G LSMG+GFV++ E
Sbjct: 617 TLFIKNLNFNTTEETLKEVFSRVGAVKSCTISKKKS--KAGVLLSMGFGFVEYKKPEQAQ 674
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE 701
+ALK LQ +D H++E++ S R + A T RK KQT SKILVRNIPFQA Q E
Sbjct: 675 KALKRLQGHIVDGHKLEVRISERATKP-ALTSTRKKQVPKKQTTSKILVRNIPFQANQRE 733
Query: 702 VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
+ ELF FGELK VRLPKKM G+G HRGFGFV+FITK +AK+A ALC STHLYGRRLVL
Sbjct: 734 IRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVL 793
Query: 762 EWAEEADNVEDIRKRTNRYF 781
EWA+ V+ +R++T ++F
Sbjct: 794 EWADSEVTVQALRRKTAKHF 813
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEDRFRQLFAAFGTLTDCSL--KFTKEGKFRKFGFIGFKSEEEAQAAL 59
>gi|241147227|ref|XP_002405304.1| RNA binding motif protein, putative [Ixodes scapularis]
gi|215493703|gb|EEC03344.1| RNA binding motif protein, putative [Ixodes scapularis]
Length = 597
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/425 (50%), Positives = 289/425 (68%), Gaps = 14/425 (3%)
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
GP++EV L IDK T K KGFA V+F+ PEHA +A+ LDG + L M + + E
Sbjct: 179 GPISEVHLSIDKITRKPKGFAFVSFMFPEHAIKAFSELDGKL-LQEMGDSVAVRMALGET 237
Query: 421 NVDGKVHCCISER--KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
V + + + +LDAF + RSK +ILVKNLP +T P +++ F FG L RV+
Sbjct: 238 QVVTETKEFLQGQGVELDAFCRPATERSKTVILVKNLPAKTHPDEIRDAFAKFGTLSRVV 297
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN 538
+PP+GI LVEF + ++A+ AF LAY+KFK VPLYLEWAP GVF E K K K+
Sbjct: 298 LPPWGICALVEFQEPSEARTAFRRLAYSKFKHVPLYLEWAPVGVFKEKKTIPKPTLKDVT 357
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIR 598
+EE + +E+ ++ + EE+EE PEPDTTL++KNLNF++TE+++R
Sbjct: 358 KEEPTKA--------SEDGEKEAEKAERQEEEEEEEEPPEPDTTLFVKNLNFSTTEEALR 409
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
HF CGPI VT+A+KKD K+PG+ LSMGYGFVQF ++S +ALK LQ+S LDEH +E
Sbjct: 410 EHFAGCGPIHEVTIAKKKDLKNPGKMLSMGYGFVQFKLKQSAKKALKQLQHSKLDEHAVE 469
Query: 659 LKRSNR-NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
LK S R + A +KRK +++ K++ +KILVRNIPF+A + E++ELF FG L+ +RL
Sbjct: 470 LKLSKRETAQQTAAELKRKKTDLGKES-TKILVRNIPFEATKKELQELFSVFGTLRDIRL 528
Query: 718 PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN-VEDIRKR 776
PKKM G+G HRGF FV+F+TKN+AKRA +ALCQSTHLYGRRLVLEWA D V+ +RK+
Sbjct: 529 PKKMAGTGRHRGFAFVDFLTKNDAKRAFQALCQSTHLYGRRLVLEWASSDDQEVDTLRKK 588
Query: 777 TNRYF 781
T +F
Sbjct: 589 TADHF 593
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 71/93 (76%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
+ + +++L+ F KGT+TD+QLKYT EG FRRFAF+GY E QA A +YF+N Y+ +S
Sbjct: 3 WGVKEDRLREFFSSKGTITDLQLKYTKEGVFRRFAFVGYKDEAQAAVAKEYFHNAYLDTS 62
Query: 87 RIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLH 119
+++V+ C LGD KP++WSKY+ DSSAYQK+H
Sbjct: 63 KLQVDICKALGDAEKPRAWSKYSKDSSAYQKMH 95
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 131/339 (38%), Gaps = 61/339 (17%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFK-----------PLPLASV---------RTTF 257
P +R I+VKNLPA +++ F P + ++ RT F
Sbjct: 260 PATERSKTVILVKNLPAKTHPDEIRDAFAKFGTLSRVVLPPWGICALVEFQEPSEARTAF 319
Query: 258 LGMAYIGFKD-----EKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASM 312
+AY FK E + K+ K ++ K + A G +
Sbjct: 320 RRLAYSKFKHVPLYLEWAPVGVFKEKKTIPKPTLKDVTK-EEPTKASEDGEKEAEKAERQ 378
Query: 313 ENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDK 372
E + + + D+ F V+NL+++ TE+ L + F GP+ EV + K
Sbjct: 379 EEEEEEEEPPEPDTTLF-----------VKNLNFSTTEEALREHFAGCGPIHEVTIAKKK 427
Query: 373 ETDK-----TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVH 427
+ + G+ V F + + A +A + L + + L K ++ +
Sbjct: 428 DLKNPGKMLSMGYGFVQFKLKQSAKKALKQLQHSKLDEHAVEL-----KLSKRETAQQTA 482
Query: 428 CCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGITG 486
+ +K D + + ILV+N+P+ +L+ LF FG L + +P TG
Sbjct: 483 AELKRKKTDLGKESTK------ILVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTG 536
Query: 487 ------LVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
V+FL KN AK AF +L T L LEWA
Sbjct: 537 RHRGFAFVDFLTKNDAKRAFQALCQSTHLYGRRLVLEWA 575
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 145/376 (38%), Gaps = 88/376 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+NL D++ F K+G L+ V+LP ALV F P A A++ L
Sbjct: 269 ILVKNLPAKTHPDEIRDAFAKFGTLSRVVLP------PWGICALVEFQEPSEARTAFRRL 322
Query: 399 DGTVFLGRMLHL-------------IP-------GKPKENEGNVDGKVHCCISERKLDAF 438
+ F L+L IP K + + + DG+ +ER+ +
Sbjct: 323 AYSKFKHVPLYLEWAPVGVFKEKKTIPKPTLKDVTKEEPTKASEDGEKEAEKAERQEEEE 382
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGI 484
+ + VKNL + T L+ F G + G++L Y
Sbjct: 383 EEEEPPEPDTTLFVKNLNFSTTEEALREHFAGCGPIHEVTIAKKKDLKNPGKMLSMGY-- 440
Query: 485 TGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEE 544
G V+F K AK A L ++K E + L+ + E +++ + K K + G+E
Sbjct: 441 -GFVQFKLKQSAKKALKQLQHSKLDEHAVELKLSKR----ETAQQTAAELKRKKTDLGKE 495
Query: 545 GEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC 604
T + ++N+ F +T+ ++ F
Sbjct: 496 S-----------------------------------TKILVRNIPFEATKKELQELFSVF 520
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVL-QNSSLDEHQIELKRSN 663
G + + + + K G G+ FV F T+ +A + L Q++ L ++ L+ ++
Sbjct: 521 GTLRDIRLPK----KMAGTGRHRGFAFVDFLTKNDAKRAFQALCQSTHLYGRRLVLEWAS 576
Query: 664 RNLESEATTVKRKSSN 679
+ + E T+++K+++
Sbjct: 577 SD-DQEVDTLRKKTAD 591
>gi|321476727|gb|EFX87687.1| hypothetical protein DAPPUDRAFT_306569 [Daphnia pulex]
Length = 845
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/349 (54%), Positives = 249/349 (71%), Gaps = 14/349 (4%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF + RSK ++LVKNL ++ +L+ LF PFG+LGRVL+PP G+T +VEFL+
Sbjct: 487 LDAFQDAPKQRSKTVMLVKNLDAQSNVDELRDLFSPFGELGRVLLPPRGVTAIVEFLEPT 546
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AKAAF LAY+KF+ +PLYLEWAP VF A ++ + K E + ++ T
Sbjct: 547 EAKAAFRKLAYSKFRHMPLYLEWAPMDVFRTAAQRVESKPSENKTKV----KDASAVATL 602
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
EE+N P + + VEE +PE DTT+++KN+NF +T+ S+R+HF+ CGPI S TVAR
Sbjct: 603 EENN----PILSDKVEE----QPEQDTTIFVKNVNFATTDQSMRKHFESCGPIFSATVAR 654
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
KKDPK+PGQFLSMGYGFVQF ++++ ALK LQNS+LD H IELKRSNR E T +
Sbjct: 655 KKDPKNPGQFLSMGYGFVQFLSKKATVTALKELQNSTLDGHTIELKRSNRTENKEETIIT 714
Query: 675 -RKSSNVAKQ-TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
RK+ + +K+ SK+LVRNIPF+A EV ELFK FGELK VRLPKKM G+ HRGF F
Sbjct: 715 ARKTLSTSKEPISSKLLVRNIPFEATTKEVTELFKPFGELKAVRLPKKMAGNQSHRGFAF 774
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
++FITK +AKRA ++L STHLYGRRLVLEWA D VED+R+RT ++
Sbjct: 775 IDFITKQDAKRAFESLSASTHLYGRRLVLEWAASEDTVEDVRRRTTSHY 823
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 175/416 (42%), Positives = 246/416 (59%), Gaps = 47/416 (11%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
++ ++LK F +KG VTDVQLKY +GKFR F F+G+ +D+A +AL YFNNT+V S +I
Sbjct: 13 VSAQKLKETFSQKGQVTDVQLKYDKDGKFRHFGFVGFKNDDEADSALSYFNNTFVGSCKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAY----QKLHNIAPKQDLKPEHTKDSKPGKKSKND 144
+VE+C NLG+++K S K AP++ QK++ + + PE D
Sbjct: 73 QVERCVNLGESSK-MSKGKKAPEAIPVPLLTQKVNPVKGDTNKTPE-------------D 118
Query: 145 PTFSDFLQLH------------GKDVSKLLPLSNKDGEEKEEENEDESNNQIAHA-DISD 191
P F++F ++H G D S P+SN+D + +EEN E+ IAH D+SD
Sbjct: 119 PEFAEFREIHSHNQKDKIWDNDGIDGSVQKPISNEDASDAKEENLIET---IAHKKDLSD 175
Query: 192 MEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLA 251
+EYLK K SD V +K + Y + V+ VKKKD+K +F PL L
Sbjct: 176 LEYLKSKVVG-GAESSDKPVKLFTKKEKAHQDYMHLKVRGFSCQVKKKDIKEFFAPLKLD 234
Query: 252 SVRT--TFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNN 309
S+R G+AYIGF EK+ KALNK++SF+ G ++++ K K + + N
Sbjct: 235 SIRLPPKVKGVAYIGFSSEKDMKKALNKHRSFYAGNRISVVKSEKKIISDEEPKSQTKNE 294
Query: 310 ASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP 369
A W+ QE+ ++ E +AESGRIF+RNL+YT TE+D+ LF +YGPLAE LP
Sbjct: 295 A---------WERQENDMKKEETVAESGRIFIRNLAYTATEEDIEALFSRYGPLAETHLP 345
Query: 370 IDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE-NEGNVDG 424
IDK + K KGFA VT+++PEHA +AY LDGT F GRMLHLI GKPK ++ + DG
Sbjct: 346 IDKHSRKIKGFAFVTYVIPEHAVRAYTALDGTAFQGRMLHLIAGKPKATDDDDADG 401
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 122/343 (35%), Gaps = 80/343 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V+NL D+L LF +G L V+LP T A+V FL P A A++ L
Sbjct: 502 MLVKNLDAQSNVDELRDLFSPFGELGRVLLPPRGVT------AIVEFLEPTEAKAAFRKL 555
Query: 399 DGTVFLGRMLHL--------------IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEA 444
+ F L+L + KP EN+ V E + VE
Sbjct: 556 AYSKFRHMPLYLEWAPMDVFRTAAQRVESKPSENKTKVKDASAVATLEENNPILSDKVEE 615
Query: 445 RSKR--IILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLV 488
+ ++ I VKN+ + T ++ FE G + G+ L Y G V
Sbjct: 616 QPEQDTTIFVKNVNFATTDQSMRKHFESCGPIFSATVARKKDPKNPGQFLSMGY---GFV 672
Query: 489 EFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEE 548
+FL K A L + +G E K ++ + KE+ +
Sbjct: 673 QFLSKKATVTALKELQNSTL-----------DGHTIELKRSNRTENKEETIITARKTLST 721
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
KE + + L ++N+ F +T + FK G +
Sbjct: 722 SKEPIS--------------------------SKLLVRNIPFEATTKEVTELFKPFGELK 755
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
+V + + K G G+ F+ F T++ +A + L S+
Sbjct: 756 AVRLPK----KMAGNQSHRGFAFIDFITKQDAKRAFESLSAST 794
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQA 394
S ++ VRN+ + T ++T+LF+ +G L V LP +++ +GFA + F+ + A +A
Sbjct: 727 SSKLLVRNIPFEATTKEVTELFKPFGELKAVRLPKKMAGNQSHRGFAFIDFITKQDAKRA 786
Query: 395 YQHLDGTVFL-GRMLHL 410
++ L + L GR L L
Sbjct: 787 FESLSASTHLYGRRLVL 803
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+I +RN+ + A + ++E LF +G L LP + +GF FV ++ A RA
Sbjct: 314 RIFIRNLAYTATEEDIEALFSRYGPLAETHLPIDKHSRKI-KGFAFVTYVIPEHAVRAYT 372
Query: 747 ALCQSTHLYGRRLVL 761
AL T GR L L
Sbjct: 373 AL-DGTAFQGRMLHL 386
>gi|193624932|ref|XP_001949363.1| PREDICTED: probable RNA-binding protein 19-like [Acyrthosiphon
pisum]
Length = 831
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/355 (54%), Positives = 245/355 (69%), Gaps = 29/355 (8%)
Query: 423 DGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY 482
D K++ KLD FNQ V RSK +ILVKNLP T +LK +F +G + RV++PP
Sbjct: 477 DTKIYLENQGVKLDIFNQTVINRSKNVILVKNLPADTTELELKDIFSKYGLVNRVVLPPS 536
Query: 483 GITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEG 542
G+TGL+EF+Q ++AK AF LAY+KFK +PLYLEWAP+ V +
Sbjct: 537 GVTGLIEFVQNSEAKTAFRQLAYSKFKHLPLYLEWAPDKVLTDV---------------- 580
Query: 543 EEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK 602
+N EE P ED+ EPE DTTL+IKN+NFN+TE+ I +HF+
Sbjct: 581 -------PQNIHEE----TFPSYTNKDTEDDIDEPESDTTLFIKNINFNTTEEHITKHFE 629
Query: 603 KCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS 662
CG IA+VTVARKKDP PG+FLSMGYGF+QFY ++S+N+ALK Q S LD H IELKRS
Sbjct: 630 PCGKIANVTVARKKDPNLPGKFLSMGYGFIQFYRQKSVNEALKTKQLSMLDNHSIELKRS 689
Query: 663 NRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV 722
NR L+S AT +RK +++ +KILVRNIPFQA EV ELFK FGELK +R+PKKMV
Sbjct: 690 NRTLQS-ATVAERKQGKSYEES-TKILVRNIPFQASIQEVIELFKTFGELKGLRMPKKMV 747
Query: 723 GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRT 777
G+G HRGF FVE+ +K EAK AM+++CQSTHLYGRRLVLEWA+ +N++++RKRT
Sbjct: 748 GTGTHRGFAFVEYNSKTEAKAAMESMCQSTHLYGRRLVLEWAQAGENLDEMRKRT 802
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/413 (47%), Positives = 269/413 (65%), Gaps = 46/413 (11%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT ++L+ F EKG +TDVQLKYT GKFR FAF+G+ E++A+AALDYF+NT++ S RI
Sbjct: 13 ITDDKLREIFSEKGVITDVQLKYTKAGKFRHFAFVGFQNEEEAKAALDYFDNTFLHSLRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG---------- 138
KVEKC+ LGD KP+SWSKYAPDS+AY+K H+ PK + E T ++P
Sbjct: 73 KVEKCTELGDDNKPRSWSKYAPDSTAYKKEHS-TPKSE---EVTIQTEPKTKKKSKLKSE 128
Query: 139 -----KKSKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEK---EEENEDESNNQIAHADIS 190
K+ +DP F++FL+ HG++ L L+N+D E+ ++E ++E N+IA+A+IS
Sbjct: 129 VEEKLKQHLSDPMFTEFLEAHGQE-KILKDLNNEDKTEESSTQKEIDEEPTNKIANANIS 187
Query: 191 DMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPL 250
D EYLK+K+ K A + P K +YHTIVV+ LP VKK LK +FKPL L
Sbjct: 188 DFEYLKIKSGKKSEA-------DILDNPGIKTEYHTIVVRGLPYKVKKAMLKEFFKPLKL 240
Query: 251 ASVRT--TFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADD-- 306
S+R G+AYIGFK++ + + L KNKSF GK++ +Y + ADD
Sbjct: 241 DSIRLPPKIKGVAYIGFKNKCDAEQCLIKNKSFLNGKRVLLYPMKNE--------ADDLE 292
Query: 307 -NNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
NNN + N W+ Q DS+ E IAESGRIFVRNL + TE++L +FEKYGP+ E
Sbjct: 293 ENNNLNKRN---PDWQKQTDSLIHEESIAESGRIFVRNLPFITTEEELQTVFEKYGPVTE 349
Query: 366 VILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
VI+PIDK + + KG+ L+T+LMPEHA +AY LDGT+F GRM+HL+PGK K N
Sbjct: 350 VIIPIDKISRQVKGYGLITYLMPEHAVKAYTELDGTIFHGRMMHLLPGKAKIN 402
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 136/319 (42%), Gaps = 38/319 (11%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKD--EKNCNKALN 276
V R + I+VKNLPA + +LK F L + R G + + + K
Sbjct: 496 VINRSKNVILVKNLPADTTELELKDIFSKYGLVN-RVVLPPSGVTGLIEFVQNSEAKTAF 554
Query: 277 KNKSFWKGKQLNIY-KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
+ ++ K K L +Y +++ D D N E + K ED + E
Sbjct: 555 RQLAYSKFKHLPLYLEWAPDKVL-----TDVPQNIHEETFPSYTNKDTEDDIDEPES--- 606
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETD-----KTKGFALVTFLMPEH 390
+F++N+++ TE+ +TK FE G +A V + K+ + + G+ + F +
Sbjct: 607 DTTLFIKNINFNTTEEHITKHFEPCGKIANVTVARKKDPNLPGKFLSMGYGFIQFYRQKS 666
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
+A + + L ++ E + + ++ERK + E +K I
Sbjct: 667 VNEALK--------TKQLSMLDNHSIELKRSNRTLQSATVAERKQ---GKSYEESTK--I 713
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGI-TG------LVEFLQKNQAKAAFNSL 503
LV+N+P++ ++ LF+ FG+L + +P + TG VE+ K +AKAA S+
Sbjct: 714 LVRNIPFQASIQEVIELFKTFGELKGLRMPKKMVGTGTHRGFAFVEYNSKTEAKAAMESM 773
Query: 504 AY-TKFKEVPLYLEWAPEG 521
T L LEWA G
Sbjct: 774 CQSTHLYGRRLVLEWAQAG 792
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 95/223 (42%), Gaps = 28/223 (12%)
Query: 308 NNASMENIKAKHWKSQEDSVQFAEDI-AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEV 366
N + E +K K K E + I E I VR L Y V + L + F K L +
Sbjct: 185 NISDFEYLKIKSGKKSEADILDNPGIKTEYHTIVVRGLPYKVKKAMLKEFF-KPLKLDSI 243
Query: 367 ILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFL-GRMLHLIPGKPKENEGNVDGK 425
LP K KG A + F A Q + FL G+ + L P K NE + D +
Sbjct: 244 RLP-----PKIKGVAYIGFKNKCDAEQCL--IKNKSFLNGKRVLLYPMK---NEAD-DLE 292
Query: 426 VHCCISERKLDAFNQVVE-------ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
+ +++R D Q A S RI V+NLP+ T +L+ +FE +G + V+
Sbjct: 293 ENNNLNKRNPDWQKQTDSLIHEESIAESGRI-FVRNLPFITTEEELQTVFEKYGPVTEVI 351
Query: 479 VPPYGIT------GLVEFLQKNQAKAAFNSLAYTKFKEVPLYL 515
+P I+ GL+ +L A A+ L T F ++L
Sbjct: 352 IPIDKISRQVKGYGLITYLMPEHAVKAYTELDGTIFHGRMMHL 394
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+I VRN+PF + E++ +F+ +G + V +P + + +G+G + ++ A +A
Sbjct: 322 RIFVRNLPFITTEEELQTVFEKYGPVTEVIIPIDKISRQV-KGYGLITYLMPEHAVKAYT 380
Query: 747 ALCQSTHLYGRRLVLEWAEEADNVED 772
L T +GR + L + N+ED
Sbjct: 381 EL-DGTIFHGRMMHLLPGKAKINLED 405
>gi|307180956|gb|EFN68744.1| Probable RNA-binding protein 19 [Camponotus floridanus]
Length = 903
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 184/350 (52%), Positives = 253/350 (72%), Gaps = 10/350 (2%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L+AFNQ + RS IIL+KNLP +T ++++ +F G+L R+++PP GIT LVEFL+ +
Sbjct: 533 LNAFNQAPKKRSTTIILIKNLPAQTKSSEIREMFAKHGELARIVMPPAGITALVEFLEPS 592
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKS---KGKEKEKNEEEGEEGEEEKKE 551
+A+ AF++LAY K+K +PLYLEWAP+ F K+ K K +E+ +E + +E KKE
Sbjct: 593 EARKAFHALAYKKYKHLPLYLEWAPDNSFTRPASKTDMIKSKSRER-RKESTDSKEAKKE 651
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
EE + + + +ED+E PEPDTTL++KN+NF++TE+ ++ +F KCGP+ +T
Sbjct: 652 IITEESKENE----KMHTKEDDE-PPEPDTTLFVKNINFSTTEEQLKDYFGKCGPLHYIT 706
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
+A KKDP++P LSMGYGFV++ + ++ALK LQ S LD +ELKRS R L S+
Sbjct: 707 IATKKDPENPTNKLSMGYGFVRYKRKHDADRALKTLQMSVLDGKSLELKRSERTLMSDVK 766
Query: 672 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
TV RK S V +QT SKILVRNIPFQA E+ ELFK++GELK VRLPKK+VG+ HRGFG
Sbjct: 767 TV-RKKSKVTEQTSSKILVRNIPFQATLQEITELFKSYGELKAVRLPKKLVGTEKHRGFG 825
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
F+E+ TK +AK+A KALCQSTHLYGRRLVLEWA+ + +E+IRKRT + F
Sbjct: 826 FIEYYTKTDAKKAFKALCQSTHLYGRRLVLEWAQAEEGIEEIRKRTAKRF 875
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 188/448 (41%), Positives = 272/448 (60%), Gaps = 65/448 (14%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T +LK F EKG VTDVQLKYT +GKFRRFAFIGY E+QA+ A +F+ TY+ + +I
Sbjct: 13 VTDTKLKELFSEKGIVTDVQLKYTKDGKFRRFAFIGYKTEEQAKLAESFFDQTYIDTCKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAY----------QKLHNIAPKQDLKPEHTKDSKPG 138
VE+C+ LGD++KP+SWSK+A DSS+ +KL + K ++K E+ D K
Sbjct: 73 FVEQCAALGDSSKPRSWSKHANDSSSSKINKAVDKSNEKLTDFTEKDNIK-ENKTDKKKE 131
Query: 139 K----------------KSKNDPTFSDFLQLH-GKDVS---------------------- 159
K K K+DP F +FL+ H G DV+
Sbjct: 132 KENADKKNKDEIRKALTKYKDDPLFMEFLETHTGNDVAIWKNDIDISMEAEKEKSDDDES 191
Query: 160 KLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLK-LKTKSKDTAPSDPSVPPVSKAP 218
+ +K+ ++++EE E++ +IA+ ISD+EY++ LK K ++ + S+ + P
Sbjct: 192 EDDKDESKENKDEKEEEENKEEKKIANKVISDLEYIEALKKKQQNVKSEEKSL--TNNVP 249
Query: 219 VHK-RQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT--TFLGMAYIGFKDEKNCNKAL 275
H + T+ ++ L KK +K +F P+ +AS+R G+AY+GFK E+ +AL
Sbjct: 250 KHGPLTFFTVKLRGLAYKHVKKHIKQFFHPVKIASIRIPPKIKGIAYVGFKTEQAMKRAL 309
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
KNKSF +GKQ+ + KY + + K N N++ +NIK WK QED+++ E+IAE
Sbjct: 310 LKNKSFLEGKQIFVSKYERKETTK------SNENSNDKNIK---WKKQEDALKNEENIAE 360
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
SGR+F+RNL+YT+TEDD+ KLFEKYGPL+EV LP+D+ T K KGF VTFLMPEHA +AY
Sbjct: 361 SGRMFIRNLTYTITEDDIRKLFEKYGPLSEVNLPVDRVTRKPKGFGTVTFLMPEHALKAY 420
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVD 423
LDGTV GRMLH++P K K + ++D
Sbjct: 421 SELDGTVLDGRMLHILPAKMKASLEDID 448
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 150/343 (43%), Gaps = 61/343 (17%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYF-KPLPLASVRTTFLGM-AYIGFKDEKNCNKALNKN 278
KR I++KNLPA K +++ F K LA + G+ A + F + KA +
Sbjct: 542 KRSTTIILIKNLPAQTKSSEIREMFAKHGELARIVMPPAGITALVEFLEPSEARKAFHA- 600
Query: 279 KSFWKGKQLNIY-KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED----I 333
++ K K L +Y +++ DNS + D IK+K + +++S E I
Sbjct: 601 LAYKKYKHLPLYLEWAPDNSFTRPASKTD-------MIKSKSRERRKESTDSKEAKKEII 653
Query: 334 AESGR-------------------IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE- 373
E + +FV+N++++ TE+ L F K GPL + + K+
Sbjct: 654 TEESKENEKMHTKEDDEPPEPDTTLFVKNINFSTTEEQLKDYFGKCGPLHYITIATKKDP 713
Query: 374 ---TDK-TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCC 429
T+K + G+ V + A +A + L +V G+ L L K +E + V
Sbjct: 714 ENPTNKLSMGYGFVRYKRKHDADRALKTLQMSVLDGKSLEL-----KRSERTLMSDVKTV 768
Query: 430 ISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT---- 485
+ K V E S + ILV+N+P++ ++ LF+ +G+L V +P +
Sbjct: 769 RKKSK------VTEQTSSK-ILVRNIPFQATLQEITELFKSYGELKAVRLPKKLVGTEKH 821
Query: 486 ---GLVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWAP--EGV 522
G +E+ K AK AF +L T L LEWA EG+
Sbjct: 822 RGFGFIEYYTKTDAKKAFKALCQSTHLYGRRLVLEWAQAEEGI 864
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 40/233 (17%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFK 509
+ ++ L Y+ + +K F P + + +PP +AY FK
Sbjct: 259 VKLRGLAYKHVKKHIKQFFHPV-KIASIRIPP-----------------KIKGIAYVGFK 300
Query: 510 -EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN 568
E + F E K+ K + K + E +K + Q+ + EEN
Sbjct: 301 TEQAMKRALLKNKSFLEGKQIFVSKYERKETTKSNENSNDK---NIKWKKQEDALKNEEN 357
Query: 569 VEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
+ E ++I+NL + TED IR+ F+K GP++ V + + + P G
Sbjct: 358 IAESGR--------MFIRNLTYTITEDDIRKLFEKYGPLSEVNLPVDRVTRKPK-----G 404
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQI-----ELKRSNRNLESEATTVKRK 676
+G V F E +A L + LD + ++K S +++ E T K+K
Sbjct: 405 FGTVTFLMPEHALKAYSELDGTVLDGRMLHILPAKMKASLEDIDMENLTYKQK 457
>gi|345490259|ref|XP_001605134.2| PREDICTED: probable RNA-binding protein 19-like [Nasonia
vitripennis]
Length = 904
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/353 (55%), Positives = 256/353 (72%), Gaps = 13/353 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L+AFNQ +ARSK +ILVKNLP T +++ +F G+LGRV++PP GIT LVEF++ +
Sbjct: 531 LNAFNQAPKARSKTVILVKNLPAGTHIREIREMFAKHGELGRVVLPPSGITALVEFIEPS 590
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKS-KGK-----EKEKNEEEGEEGEEE 548
+A+ AF LAY+KFK +PLYLEWAP+ F A KS KGK EK +N +G
Sbjct: 591 EARKAFMRLAYSKFKHLPLYLEWAPDDSFTSAPPKSAKGKTDTADEKVRNNTKGNGAV-- 648
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
K E + N E +E+ +E++E EPEPDTTL++KNL+F +TE+ +R+HF KCG +
Sbjct: 649 KAEGGTDNKN-----EAKESDDEEDEDEPEPDTTLFVKNLDFRTTEEQLRKHFSKCGKLH 703
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES 668
+V+ KKDPK+PG LSMGYGFV++ + +ALK LQ S+LD ++LKRS R L++
Sbjct: 704 YASVSTKKDPKNPGNKLSMGYGFVRYKFKSDCERALKELQTSNLDGKTLDLKRSERTLQT 763
Query: 669 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 728
+ T +K+S + +QTG+KILVRN+PFQA EV+ELFKAFGE+K VRLPKKMVG HR
Sbjct: 764 DVITTAKKTSKITEQTGTKILVRNVPFQANADEVKELFKAFGEIKSVRLPKKMVGEEKHR 823
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
GFGFVEF TK EAKRA KALCQSTHLYGRRLVLEWA+ + VED+RKRT ++F
Sbjct: 824 GFGFVEFYTKKEAKRAFKALCQSTHLYGRRLVLEWAQTDEGVEDLRKRTAKHF 876
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 186/437 (42%), Positives = 248/437 (56%), Gaps = 60/437 (13%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T+ +LK F EKG VTDVQLKYT + KFRRF F+GY ED+A AALD+F+N+ + ++RI
Sbjct: 13 VTETKLKELFSEKGIVTDVQLKYTEDRKFRRFGFVGYKTEDEASAALDFFHNSCIDTARI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDS--SAYQKLHNIAPKQDLKPEHTKDSKPG-------- 138
VE+C+ LGD +KPKSWSKYAPDS S ++ P +D K +
Sbjct: 73 TVERCAGLGDASKPKSWSKYAPDSKSSEAKEAPTSEPAEDGKKKKKSKKGKEEEEVDDKS 132
Query: 139 -------------------KKSKNDPTFSDFLQLHGKDVSKLL-------------PLSN 166
+K K+DP F +FL+ H K K+ P +
Sbjct: 133 GKKNKKDKEKENNKVKELLEKHKDDPLFEEFLESHTKGDKKIWSNNALLGDDNEEDPHED 192
Query: 167 KDGEEKEEENEDESNNQ----IAHADISDMEYLK-LKTKSKDTAPSDPSVPPVSKAPVHK 221
KD ++ +EDES++ IA +ISD EY++ LK KS+ D K +
Sbjct: 193 KDSDDGGSGSEDESDSDEGEAIAKKNISDKEYMEALKKKSQGLKVKDIKEIDKKKGTTN- 251
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT--TFLGMAYIGFKDEKNCNKALNKNK 279
+ T+ + L KKKD+K +FK + S+R G+AY+GFK EK +ALNKNK
Sbjct: 252 --FFTVKLNGLAYNHKKKDIKIFFKGMKPKSIRVPRKIKGIAYVGFKTEKLMKQALNKNK 309
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
SF GK+ I+ + S K DD ++ WK QE++++ E++AESGRI
Sbjct: 310 SFLDGKR--IFVTKYEKSEKEEEKQDDKKGPNL------RWKQQEEALKSEENVAESGRI 361
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
F+RNLSYT TEDD+ KLFE YGPL+EV LPID T K KGF VTFLMPEHA +AY LD
Sbjct: 362 FLRNLSYTATEDDIRKLFETYGPLSEVNLPIDMVTRKPKGFGTVTFLMPEHAVKAYSELD 421
Query: 400 GTVFLGRMLHLIPGKPK 416
G+V GRMLHL+P K K
Sbjct: 422 GSVLNGRMLHLLPAKTK 438
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 138/337 (40%), Gaps = 48/337 (14%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYF-KPLPLASVRTTFLGM-AYIGFKDEKNCNKALNKNK 279
R I+VKNLPAG ++++ F K L V G+ A + F + KA +
Sbjct: 541 RSKTVILVKNLPAGTHIREIREMFAKHGELGRVVLPPSGITALVEFIEPSEARKAFMR-L 599
Query: 280 SFWKGKQLNIY-KYSKDNSAKYS------GAADDNNNASMENIKAKHWKSQEDSVQFAED 332
++ K K L +Y +++ D+S + G D + N K E +
Sbjct: 600 AYSKFKHLPLYLEWAPDDSFTSAPPKSAKGKTDTADEKVRNNTKGNGAVKAEGGTDNKNE 659
Query: 333 IAESGR------------IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK---- 376
ES +FV+NL + TE+ L K F K G L + K+
Sbjct: 660 AKESDDEEDEDEPEPDTTLFVKNLDFRTTEEQLRKHFSKCGKLHYASVSTKKDPKNPGNK 719
Query: 377 -TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKL 435
+ G+ V + +A + L + G+ L L K +E + V +
Sbjct: 720 LSMGYGFVRYKFKSDCERALKELQTSNLDGKTLDL-----KRSERTLQTDVITTAKKT-- 772
Query: 436 DAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLV 488
+++ E + ILV+N+P++ ++K LF+ FG++ V +P + G V
Sbjct: 773 ---SKITEQTGTK-ILVRNVPFQANADEVKELFKAFGEIKSVRLPKKMVGEEKHRGFGFV 828
Query: 489 EFLQKNQAKAAFNSLAY-TKFKEVPLYLEWAP--EGV 522
EF K +AK AF +L T L LEWA EGV
Sbjct: 829 EFYTKKEAKRAFKALCQSTHLYGRRLVLEWAQTDEGV 865
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 679 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
NVA+ +I +RN+ + A + ++ +LF+ +G L V LP MV + +GFG V F+
Sbjct: 354 NVAES--GRIFLRNLSYTATEDDIRKLFETYGPLSEVNLPIDMV-TRKPKGFGTVTFLMP 410
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDI 773
A +A L S L GR L L A+ + ED+
Sbjct: 411 EHAVKAYSELDGSV-LNGRMLHLLPAKTKTSPEDL 444
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 559 QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
Q+ + EENV E ++++NL++ +TED IR+ F+ GP++ V +
Sbjct: 345 QEEALKSEENVAESGR--------IFLRNLSYTATEDDIRKLFETYGPLSEVNLPIDMVT 396
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
+ P G+G V F E +A L S L+ + L
Sbjct: 397 RKP-----KGFGTVTFLMPEHAVKAYSELDGSVLNGRMLHL 432
>gi|307192625|gb|EFN75799.1| Probable RNA-binding protein 19 [Harpegnathos saltator]
Length = 863
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 182/347 (52%), Positives = 241/347 (69%), Gaps = 2/347 (0%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L+ FNQ + RS +ILVKNLP +T P D++ +F G+LGR+++PP GIT LVEFL+ +
Sbjct: 494 LNTFNQAPKQRSNTVILVKNLPAQTKPADIREMFVKHGELGRIVLPPSGITALVEFLEPS 553
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAYTKFK +PLYLEWAP+ F K KGK K EE + E+
Sbjct: 554 EARKAFTKLAYTKFKHLPLYLEWAPDNSFTAPASKCKGKRDTKKSSNAEEAKGEEATQKE 613
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
++N + + + D+E EPE DTTL++KN+NF++T + ++ +F KCG + V +A
Sbjct: 614 SKENVNNANKKADADDADDE-EPESDTTLFVKNINFSTTTEELKSYFSKCGRLHYVMIAT 672
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
KKDPK+PG LSMGYGFV++ + ++ALK LQ S LD +ELKRS R L S+ T
Sbjct: 673 KKDPKNPGNNLSMGYGFVRYKRKYDADRALKTLQMSVLDGKSLELKRSERILTSDVKTA- 731
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
RK S + +QTG+KILVRN+PFQAK E+ ELFKAFGELK RLP+K+VG HRGF F+E
Sbjct: 732 RKKSKITEQTGTKILVRNVPFQAKAEEITELFKAFGELKATRLPRKLVGFEKHRGFAFIE 791
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+ TK +AKRA +LCQSTHLYGRRLVLEWA+ +N+E+IRKRT F
Sbjct: 792 YHTKEDAKRAFTSLCQSTHLYGRRLVLEWAQAEENLEEIRKRTAERF 838
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 180/436 (41%), Positives = 246/436 (56%), Gaps = 80/436 (18%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT +LK F EKG VTDVQLKYT +GKFRRFAFIGY E+QAQ A YF+ +Y+ S RI
Sbjct: 13 ITDNKLKELFSEKGIVTDVQLKYTKDGKFRRFAFIGYKTEEQAQLAQSYFDKSYIESCRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDS--KPG-------- 138
VEKC+NLGD +KP++WSKYA DSS + ++ K + + +++S K G
Sbjct: 73 SVEKCANLGDPSKPRAWSKYATDSS-HTADNSFKDKAKVSTDSSEESNVKSGKNNEKKEK 131
Query: 139 ----------KKSKNDPTFSDFLQLH-GKDVSKLL---------PLSNKDGEEKEEEN-- 176
+K K+DP F +F + H G ++ + + N + ++K+E
Sbjct: 132 KDNEEVKKALEKHKDDPLFMEFFETHTGNNIKAIWRNDISASADVIGNFNDDDKDENTAE 191
Query: 177 --------EDESNNQIAHADISDMEYLKLKTKSKDTAPSDPS-VPPVSKAPVHKRQYHTI 227
E + +IA ISD+EY++ K +T + S V +SK V K
Sbjct: 192 NGDEEEEEERKGEEKIADKVISDLEYMEALKKKPETKCEEKSLVKSISKKHVPKSI---- 247
Query: 228 VVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQL 287
+P +K G+AY+GFK E KAL KNKSF GKQ+
Sbjct: 248 ---RIPRNIK---------------------GIAYLGFKTEMQMKKALLKNKSFLDGKQI 283
Query: 288 NIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYT 347
+ KY + G+ +D+N S ++K WK Q + ++ E IAESGR+F+RNL+YT
Sbjct: 284 FVSKYEQ-----RKGSGEDSN--SKVDVK---WKKQGEMLKDEESIAESGRMFIRNLTYT 333
Query: 348 VTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRM 407
TEDD+ KLFEKYGPL+EV LP+DK T + KGF VTFLMPEHA +AY LDG+V GRM
Sbjct: 334 TTEDDVRKLFEKYGPLSEVNLPVDKVTRRLKGFGTVTFLMPEHAIKAYTELDGSVLDGRM 393
Query: 408 LHLIPGKPKENEGNVD 423
LHL+PGK K + ++D
Sbjct: 394 LHLLPGKAKTSLEDID 409
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 144/338 (42%), Gaps = 48/338 (14%)
Query: 215 SKAPVHKRQYHTIVVKNLPAGVKKKDLKAYF-KPLPLASVRTTFLGM-AYIGFKDEKNCN 272
++AP +R I+VKNLPA K D++ F K L + G+ A + F +
Sbjct: 498 NQAP-KQRSNTVILVKNLPAQTKPADIREMFVKHGELGRIVLPPSGITALVEFLEPSEAR 556
Query: 273 KALNKNKSFWKGKQLNIY-KYSKDNS-----AKYSGAADDNNNASMENIKAKHWKSQED- 325
KA K ++ K K L +Y +++ DNS +K G D +++ E K + +E
Sbjct: 557 KAFTK-LAYTKFKHLPLYLEWAPDNSFTAPASKCKGKRDTKKSSNAEEAKGEEATQKESK 615
Query: 326 ------------SVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE 373
E+ +FV+N++++ T ++L F K G L V++ K+
Sbjct: 616 ENVNNANKKADADDADDEEPESDTTLFVKNINFSTTTEELKSYFSKCGRLHYVMIATKKD 675
Query: 374 -----TDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHC 428
+ + G+ V + A +A + L +V G+ L L K +E + V
Sbjct: 676 PKNPGNNLSMGYGFVRYKRKYDADRALKTLQMSVLDGKSLEL-----KRSERILTSDVKT 730
Query: 429 CISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--- 485
+ K + ++ ILV+N+P++ ++ LF+ FG+L +P +
Sbjct: 731 ARKKSK-------ITEQTGTKILVRNVPFQAKAEEITELFKAFGELKATRLPRKLVGFEK 783
Query: 486 ----GLVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
+E+ K AK AF SL T L LEWA
Sbjct: 784 HRGFAFIEYHTKEDAKRAFTSLCQSTHLYGRRLVLEWA 821
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 628 GYGFVQFYTRESLNQALKVLQNSS-LDEHQI------ELKRSNRNLESEATTVKRKSSNV 680
G ++ F T + +AL L+N S LD QI + K S + S+ +K +
Sbjct: 255 GIAYLGFKTEMQMKKAL--LKNKSFLDGKQIFVSKYEQRKGSGEDSNSKVDVKWKKQGEM 312
Query: 681 AKQTGS-----KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
K S ++ +RN+ + + +V +LF+ +G L V LP V L +GFG V F
Sbjct: 313 LKDEESIAESGRMFIRNLTYTTTEDDVRKLFEKYGPLSEVNLPVDKVTRRL-KGFGTVTF 371
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDI 773
+ A +A L S L GR L L + ++EDI
Sbjct: 372 LMPEHAIKAYTELDGSV-LDGRMLHLLPGKAKTSLEDI 408
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++I+NL + +TED +R+ F+K GP++ V + K + G+G V F E +
Sbjct: 325 MFIRNLTYTTTEDDVRKLFEKYGPLSEVNLPVDKVTRRL-----KGFGTVTFLMPEHAIK 379
Query: 643 ALKVLQNSSLDEHQIEL 659
A L S LD + L
Sbjct: 380 AYTELDGSVLDGRMLHL 396
>gi|332024948|gb|EGI65135.1| Putative RNA-binding protein 19 [Acromyrmex echinatior]
Length = 862
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 181/348 (52%), Positives = 248/348 (71%), Gaps = 7/348 (2%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAFN+ + RS IILVKNLP T P +L+ +F G+L R+++PP GIT LVEFL+
Sbjct: 492 LDAFNETPKKRSSTIILVKNLPAETKPNELQEMFAKHGELARIILPPAGITALVEFLEPF 551
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF +LAYTK+K +PLYLEWAP+ F K+ E ++ + +E K E T
Sbjct: 552 EARKAFRTLAYTKYKHLPLYLEWAPDNSFTTPASKNNTIENNVTTKKSADLKEVKDEVTI 611
Query: 555 EEDNQQGVPEVEENVEEDEEREP-EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
+E N E + N ++E+ EP E DTTL++KN+NF++TE+ ++ +F KCGP+ +T+A
Sbjct: 612 KEFN-----ENKNNTHKEEDNEPPESDTTLFVKNINFSTTEEQLKDYFGKCGPLHYITIA 666
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
K DP++P + LSMGYGF+++ + ++ALK LQ S LD +ELKRS R L S+ T
Sbjct: 667 TKMDPENPAKKLSMGYGFIRYKRKFDADRALKTLQMSVLDGKSLELKRSERTLISDVKTA 726
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
RK S + +QTG+KILVRNIPFQA EV ELFK++GELK VRLPKK+VG+ HRGF F+
Sbjct: 727 -RKKSKITEQTGTKILVRNIPFQATVQEVTELFKSYGELKAVRLPKKLVGTEKHRGFAFI 785
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
E+ TK++AK+A KALCQSTHLYGRRLVLEWA+ + +E+IRKRT ++F
Sbjct: 786 EYYTKSDAKKAFKALCQSTHLYGRRLVLEWAQTEEGIEEIRKRTVKHF 833
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 169/409 (41%), Positives = 239/409 (58%), Gaps = 28/409 (6%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T +LK F +KG VTDVQLKYT +GKFRRFAFIGY E+QA+ A YF+ T++ +S+I
Sbjct: 13 VTDIKLKELFSQKGIVTDVQLKYTKDGKFRRFAFIGYKSEEQAKLAQSYFDQTFIDTSKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
VE+C+NL KP ++ + K D K E+ + K +K K+DP F
Sbjct: 73 YVEQCANLESKVKPIDLTENTEEVKNKSDKKKKKKKADKK-ENDELKKALEKHKDDPLFM 131
Query: 149 DFLQLH-GKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPS 207
+FL+ H GKD + N G K+E + ++ D S LK + + +
Sbjct: 132 EFLETHTGKDAKTVW--KNDIGVPKDEIEKSSGESEDEEHDESKETSLKTEKVTLSSGKD 189
Query: 208 DPS----------VPPVSK-APVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT- 255
+P +SK P+ +T+ ++ L KK +K +F+P+ S+R
Sbjct: 190 EPDWLRQSGIKSLTKDISKHGPL---TLYTVKIRGLAYVHMKKHIKQFFRPIKPKSIRIP 246
Query: 256 -TFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMEN 314
G+AY+GFK E+ KAL KNKSF +GKQ+ + KY + + + D+ N + N
Sbjct: 247 PKIKGIAYVGFKTEQAMKKALMKNKSFLEGKQIFVSKYERKEEVE---SNKDSYNKT--N 301
Query: 315 IKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET 374
IK WK QE+ ++ E IAESGR+F+RNL+YT TEDD+ KLFEKYGPL+EV LPID+ T
Sbjct: 302 IK---WKKQEEVLKNEESIAESGRMFIRNLTYTTTEDDVRKLFEKYGPLSEVDLPIDRMT 358
Query: 375 DKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVD 423
K KGF +TFLMPEHA +AY LDG++ GRMLH++PGK K + N+D
Sbjct: 359 RKPKGFGTITFLMPEHAVKAYSELDGSILDGRMLHILPGKTKTSLENID 407
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 149/335 (44%), Gaps = 46/335 (13%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYF-KPLPLASVRTTFLGM-AYIGFKDEKNCNKALNKN 278
KR I+VKNLPA K +L+ F K LA + G+ A + F + KA +
Sbjct: 501 KRSSTIILVKNLPAETKPNELQEMFAKHGELARIILPPAGITALVEFLEPFEARKAF-RT 559
Query: 279 KSFWKGKQLNIY-KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSV---QFAEDIA 334
++ K K L +Y +++ DNS + ++ ++ K+ K +D V +F E+
Sbjct: 560 LAYTKYKHLPLYLEWAPDNSFTTPASKNNTIENNVTTKKSADLKEVKDEVTIKEFNENKN 619
Query: 335 ESGR------------IFVRNLSYTVTEDDLTKLFEKYGPLAEVILP--IDKETDKTK-- 378
+ + +FV+N++++ TE+ L F K GPL + + +D E K
Sbjct: 620 NTHKEEDNEPPESDTTLFVKNINFSTTEEQLKDYFGKCGPLHYITIATKMDPENPAKKLS 679
Query: 379 -GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
G+ + + A +A + L +V G+ L L K +E IS+ K
Sbjct: 680 MGYGFIRYKRKFDADRALKTLQMSVLDGKSLEL-----KRSE-------RTLISDVKTAR 727
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEF 490
+ ++ ILV+N+P++ ++ LF+ +G+L V +P + +E+
Sbjct: 728 KKSKITEQTGTKILVRNIPFQATVQEVTELFKSYGELKAVRLPKKLVGTEKHRGFAFIEY 787
Query: 491 LQKNQAKAAFNSLAY-TKFKEVPLYLEWAP--EGV 522
K+ AK AF +L T L LEWA EG+
Sbjct: 788 YTKSDAKKAFKALCQSTHLYGRRLVLEWAQTEEGI 822
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++I+NL + +TED +R+ F+K GP++ V + + + P G+G + F E +
Sbjct: 323 MFIRNLTYTTTEDDVRKLFEKYGPLSEVDLPIDRMTRKPK-----GFGTITFLMPEHAVK 377
Query: 643 ALKVLQNSSLDEHQIEL-----KRSNRNLESEATTVKRKSSNVAKQTGS 686
A L S LD + + K S N+++E T K+K K T S
Sbjct: 378 AYSELDGSILDGRMLHILPGKTKTSLENIDTENLTYKQKKELQTKATAS 426
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 130/351 (37%), Gaps = 85/351 (24%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S I V+NL ++L ++F K+G LA +ILP T ALV FL P A +A+
Sbjct: 504 STIILVKNLPAETKPNELQEMFAKHGELARIILPPAGIT------ALVEFLEPFEARKAF 557
Query: 396 QHLDGTVFLGRMLHL---------IPG-KPKENEGNVDGKVHCCISERK----LDAFNQV 441
+ L T + L+L P K E NV K + E K + FN+
Sbjct: 558 RTLAYTKYKHLPLYLEWAPDNSFTTPASKNNTIENNVTTKKSADLKEVKDEVTIKEFNEN 617
Query: 442 VE----------ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV--------PPYG 483
S + VKN+ + T LK F G L + + P
Sbjct: 618 KNNTHKEEDNEPPESDTTLFVKNINFSTTEEQLKDYFGKCGPLHYITIATKMDPENPAKK 677
Query: 484 IT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
++ G + + +K A A +L + L L+ + + ++ K+ K+ + E+
Sbjct: 678 LSMGYGFIRYKRKFDADRALKTLQMSVLDGKSLELKRSERTLISDV--KTARKKSKITEQ 735
Query: 541 EGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRH 600
G T + ++N+ F +T +
Sbjct: 736 TG--------------------------------------TKILVRNIPFQATVQEVTEL 757
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
FK G + +V + + K G G+ F+++YT+ +A K L S+
Sbjct: 758 FKSYGELKAVRLPK----KLVGTEKHRGFAFIEYYTKSDAKKAFKALCQST 804
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 82/199 (41%), Gaps = 24/199 (12%)
Query: 320 WKSQEDSVQFAEDIAESG-----RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET 374
W Q +DI++ G + +R L+Y + + + F P + I P
Sbjct: 193 WLRQSGIKSLTKDISKHGPLTLYTVKIRGLAYVHMKKHIKQFFRPIKPKSIRIPP----- 247
Query: 375 DKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN-EGNVDGKVHCCISER 433
K KG A V F E A + + + G+ + + + KE E N D I +
Sbjct: 248 -KIKGIAYVGF-KTEQAMKKALMKNKSFLEGKQIFVSKYERKEEVESNKDSYNKTNIKWK 305
Query: 434 KLDAF--NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGI 484
K + N+ A S R+ ++NL Y T D++ LFE +G L V +P P G
Sbjct: 306 KQEEVLKNEESIAESGRM-FIRNLTYTTTEDDVRKLFEKYGPLSEVDLPIDRMTRKPKGF 364
Query: 485 TGLVEFLQKNQAKAAFNSL 503
G + FL A A++ L
Sbjct: 365 -GTITFLMPEHAVKAYSEL 382
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T+ I+ L + + I++ F+ P K + P + G +V F T +++
Sbjct: 216 TVKIRGLAYVHMKKHIKQFFRPIKP---------KSIRIPPKI--KGIAYVGFKTEQAMK 264
Query: 642 QALKVLQNSS-LDEHQIELKRSNRNLESEA-------TTVK-RKSSNVAKQTGS-----K 687
+AL ++N S L+ QI + + R E E+ T +K +K V K S +
Sbjct: 265 KAL--MKNKSFLEGKQIFVSKYERKEEVESNKDSYNKTNIKWKKQEEVLKNEESIAESGR 322
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
+ +RN+ + + +V +LF+ +G L V LP + +GFG + F+ A +A
Sbjct: 323 MFIRNLTYTTTEDDVRKLFEKYGPLSEVDLPIDRMTRK-PKGFGTITFLMPEHAVKAYSE 381
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDI 773
L S L GR L + + ++E+I
Sbjct: 382 LDGSI-LDGRMLHILPGKTKTSLENI 406
>gi|427792715|gb|JAA61809.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 841
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 193/350 (55%), Positives = 248/350 (70%), Gaps = 15/350 (4%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAFN+ RSK +ILVKNLP +T P DL ++F FG L RV++PP+G+T L+EF
Sbjct: 471 LDAFNRPATERSKTVILVKNLPAKTPPKDLHSVFGKFGILSRVVLPPWGVTALIEFQDPT 530
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+AAF LAY+KFK VPLYLEWAP GVF+ K K K EGE + K+
Sbjct: 531 EARAAFRRLAYSKFKHVPLYLEWAPTGVFSTEKSADKSKT---------EGETKTKDT-- 579
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
E+ + + + EE E +EE PEPDTTL+IKNLNF++ E+++R HF++CGPI VT+A+
Sbjct: 580 EQKHAEQPADEEEEAENEEEIPPEPDTTLFIKNLNFSTDEEAVREHFEQCGPIHEVTIAK 639
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESE--ATT 672
KKD K+ GQ LSMGYGFVQF R++ QALK LQ+S LD H +ELK S R E A
Sbjct: 640 KKDTKNAGQLLSMGYGFVQFKQRKAAKQALKQLQHSKLDGHALELKLSTRATTKEEVAAA 699
Query: 673 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
++K +++ K+ G+KILVRNIPFQA Q EV++LF FG L+ +RLP+KM G HRGFGF
Sbjct: 700 QRKKVTDIGKE-GTKILVRNIPFQANQKEVQDLFSVFGTLRGIRLPRKMAAGGRHRGFGF 758
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN-VEDIRKRTNRYF 781
VEF+TKN+AKRA +ALCQSTHLYGRRLVLEWA D V+ +RK+T +F
Sbjct: 759 VEFLTKNDAKRAFEALCQSTHLYGRRLVLEWASTDDQEVDTLRKKTADHF 808
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/408 (40%), Positives = 233/408 (57%), Gaps = 61/408 (14%)
Query: 46 DVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSW 105
D+QLKYT EG FRRFAF+G+ E QA AA +YFNN+Y+ +S+++VE C+ LGD KP+SW
Sbjct: 1 DLQLKYTKEGVFRRFAFVGFKDEAQAAAAKEYFNNSYLDTSKLQVEICAALGDEQKPRSW 60
Query: 106 SKYAPDSSAYQKLH----------NIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQLHG 155
SKY+ DSSAYQ+LH +P+++ E KD + K+ F +FL++HG
Sbjct: 61 SKYSADSSAYQRLHPETKKPKPVKEQSPRKNFADEFLKDLEGNKE------FEEFLKVHG 114
Query: 156 K------DVSKLLPLSNKDGEEKE----------------EENEDESNNQIAHADISDME 193
D P N DGE K+ EE +++ ++ D S+
Sbjct: 115 THNKVTWDNDTRAP--NADGEAKKGKPAKAVPPPKSAAKDEEEDEDDADEEEPKDDSNKA 172
Query: 194 YLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASV 253
K K D P K PV + Y T+ VK LP KKK +K +FKP +AS+
Sbjct: 173 PASSKAKENDKQQQAPQQKQKPKLPVQEFAY-TLKVKGLPYNCKKKQIKDFFKPAKVASL 231
Query: 254 RT--TFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNAS 311
R G+AY+GFK E++ +ALNK+ SF G +L++ KY+K
Sbjct: 232 RLPPKVRGIAYLGFKKEQDMKQALNKHHSFMAGHRLDVTKYAK----------------- 274
Query: 312 MENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPID 371
+ + K W+ ED E +A++GRIF+RNLSYT+TE++L +LF+KYGPL EV L ID
Sbjct: 275 -QVVPEKKWRQFEDLGNPQETLADTGRIFIRNLSYTITEEELEELFKKYGPLEEVHLSID 333
Query: 372 KETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
+ T K KGFA V+FL PEHA +A+ LDG + GR+LHL+P K K++E
Sbjct: 334 RVTRKPKGFAFVSFLFPEHAIRAFTELDGQMLQGRLLHLLPAKAKKSE 381
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 137/326 (42%), Gaps = 37/326 (11%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS--VRTTFLGMAYIGFKDEKNCNKAL 275
P +R I+VKNLPA KDL + F + S V + A I F+D A
Sbjct: 477 PATERSKTVILVKNLPAKTPPKDLHSVFGKFGILSRVVLPPWGVTALIEFQDPTEARAAF 536
Query: 276 NKNKSFWKGKQLNIY-------KYSKDNSAKYSGAADDNNNASME--NIKAKHWKSQEDS 326
+ ++ K K + +Y +S + SA S + E + + + +E
Sbjct: 537 RR-LAYSKFKHVPLYLEWAPTGVFSTEKSADKSKTEGETKTKDTEQKHAEQPADEEEEAE 595
Query: 327 VQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFA 381
+ +F++NL+++ E+ + + FE+ GP+ EV + K+T + G+
Sbjct: 596 NEEEIPPEPDTTLFIKNLNFSTDEEAVREHFEQCGPIHEVTIAKKKDTKNAGQLLSMGYG 655
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQV 441
V F + A QA + L + G L L + K ++RK +V
Sbjct: 656 FVQFKQRKAAKQALKQLQHSKLDGHALEL------KLSTRATTKEEVAAAQRK-----KV 704
Query: 442 VE-ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQK 493
+ + ILV+N+P++ +++ LF FG L + +P G VEFL K
Sbjct: 705 TDIGKEGTKILVRNIPFQANQKEVQDLFSVFGTLRGIRLPRKMAAGGRHRGFGFVEFLTK 764
Query: 494 NQAKAAFNSLAY-TKFKEVPLYLEWA 518
N AK AF +L T L LEWA
Sbjct: 765 NDAKRAFEALCQSTHLYGRRLVLEWA 790
>gi|383847362|ref|XP_003699323.1| PREDICTED: probable RNA-binding protein 19-like [Megachile
rotundata]
Length = 886
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 186/348 (53%), Positives = 250/348 (71%), Gaps = 8/348 (2%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAFNQ RSK ++LVKNLP T +++ LF P G+LGRV++PP G+T LVEFL+ +
Sbjct: 522 LDAFNQAPSKRSKTVLLVKNLPAATTVREIRQLFAPHGELGRVVMPPSGVTALVEFLEPS 581
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF+ LAYTKFK +PLYLEWAP+ F + S K ++K E++ E+ +N
Sbjct: 582 EARKAFSKLAYTKFKHLPLYLEWAPDNSFTAPAKASDVKPEQKTEKKIEQ------KNLK 635
Query: 555 EEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
E++ + V + + EE EE E PDTTL++KN+NF +TE+ + +F KCGP++ ++A
Sbjct: 636 VEESAENVKDENKEKEESEEEEESEPDTTLFVKNINFATTEEQLHSYFSKCGPLSYASIA 695
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
KKD K+PG LSMGYGFV++ + ++ALKVLQ + LD +ELKRS R L ++ T
Sbjct: 696 TKKDVKNPGGKLSMGYGFVRYKRKADADRALKVLQMTVLDGKTLELKRSERTLTTDVTNA 755
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
K K+S V +QTG+KIL+RN+PFQA E+ ELFKAFGELK VRLP+K+VG HRGFGFV
Sbjct: 756 K-KTSKVTEQTGTKILIRNVPFQANVHEITELFKAFGELKAVRLPRKLVGVEKHRGFGFV 814
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
E+ TK EAK+A KAL QSTHLYGRRLVLEWA+ + +EDIRKRT ++F
Sbjct: 815 EYYTKGEAKKAFKALGQSTHLYGRRLVLEWAQTEEGIEDIRKRTAKHF 862
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 184/434 (42%), Positives = 254/434 (58%), Gaps = 59/434 (13%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT ++L+ F +KG VTDVQLKYT +GKFRRFAFIG+ E+QA AA +YF+ T + + RI
Sbjct: 13 ITDKKLREHFSQKGLVTDVQLKYTKDGKFRRFAFIGFKTEEQALAAKEYFDKTCIDTCRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG---------- 138
+E+C++LGD++KP++WSKYAPDSS + L N ++ T D
Sbjct: 73 TIEQCASLGDSSKPRAWSKYAPDSS--KSLENDKNSKNESLSETTDESKKEKKKKKDKNV 130
Query: 139 --------KKSKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQ------- 183
+K K+DP F +FL+ H + + + D +ENE + + +
Sbjct: 131 ASEVKEALEKHKDDPLFVEFLESHTSNKA----VWKNDTTLITDENEKQEDKEEESDEDD 186
Query: 184 ---------------IAHADISDMEYLK-LKTKSKDTAPSDPSVPPVSKAPVHK-RQYHT 226
IA +SD++Y++ LK K K T + V KAP H ++ T
Sbjct: 187 SKEEEEKEAEGEKKKIADKALSDLQYMEALKKKKKSTESKEEGTSDVKKAPKHGPVEFFT 246
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRT--TFLGMAYIGFKDEKNCNKALNKNKSFWKG 284
+ ++ L KKKD+K +F+PL S+R G+AY+GFK E++ KAL KNKSF G
Sbjct: 247 VKLRGLAYNHKKKDIKQFFRPLKAKSIRVPPKIKGIAYVGFKTEQHLKKALLKNKSFIDG 306
Query: 285 KQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNL 344
KQ+ + +Y K ++ N+ EN WK QE++++ E IAESGR+FVRNL
Sbjct: 307 KQIFVTRYEK---------SEQINDEKNENNGDVRWKKQEEALKDEETIAESGRMFVRNL 357
Query: 345 SYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFL 404
SYT TEDD+ KLFEKYGPL EV LPIDK T K KGF +TFLMPEHA +AY LDG++
Sbjct: 358 SYTTTEDDIRKLFEKYGPLTEVNLPIDKVTRKPKGFGTITFLMPEHAVKAYSELDGSILD 417
Query: 405 GRMLHLIPGKPKEN 418
GRMLHL+PGK K +
Sbjct: 418 GRMLHLLPGKAKSS 431
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 152/344 (44%), Gaps = 54/344 (15%)
Query: 215 SKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCN 272
++AP KR ++VKNLPA ++++ F P L V G+ A + F +
Sbjct: 526 NQAP-SKRSKTVLLVKNLPAATTVREIRQLFAPHGELGRVVMPPSGVTALVEFLEPSEAR 584
Query: 273 KALNKNKSFWKGKQLNIY-KYSKDNSAKYSGAADDNN--NASMENIKAKHWKSQEDSVQF 329
KA +K ++ K K L +Y +++ DNS A D + + I+ K+ K +E
Sbjct: 585 KAFSK-LAYTKFKHLPLYLEWAPDNSFTAPAKASDVKPEQKTEKKIEQKNLKVEES---- 639
Query: 330 AEDIAESGR----------------IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE 373
AE++ + + +FV+N+++ TE+ L F K GPL+ + K+
Sbjct: 640 AENVKDENKEKEESEEEEESEPDTTLFVKNINFATTEEQLHSYFSKCGPLSYASIATKKD 699
Query: 374 TDK-----TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHC 428
+ G+ V + A +A + L TV G+ L L K +E + V
Sbjct: 700 VKNPGGKLSMGYGFVRYKRKADADRALKVLQMTVLDGKTLEL-----KRSERTLTTDVTN 754
Query: 429 CISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP--YGIT- 485
K V ++ IL++N+P++ ++ LF+ FG+L V +P G+
Sbjct: 755 AKKTSK-------VTEQTGTKILIRNVPFQANVHEITELFKAFGELKAVRLPRKLVGVEK 807
Query: 486 ----GLVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWAP--EGV 522
G VE+ K +AK AF +L T L LEWA EG+
Sbjct: 808 HRGFGFVEYYTKGEAKKAFKALGQSTHLYGRRLVLEWAQTEEGI 851
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 37/212 (17%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY--GITGLVEFLQKNQAKAAFNSLAYTK 507
+ ++ L Y D+K F P + VPP GI + +++ KA + ++
Sbjct: 247 VKLRGLAYNHKKKDIKQFFRPL-KAKSIRVPPKIKGIAYVGFKTEQHLKKALLKNKSFID 305
Query: 508 FKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEE 567
K++ F EKS+ EKNE G+ KK+ A +D EE
Sbjct: 306 GKQI-----------FVTRYEKSEQINDEKNENNGDV--RWKKQEEALKD--------EE 344
Query: 568 NVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSM 627
+ E ++++NL++ +TED IR+ F+K GP+ V + K + P
Sbjct: 345 TIAESGR--------MFVRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDKVTRKP-----K 391
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
G+G + F E +A L S LD + L
Sbjct: 392 GFGTITFLMPEHAVKAYSELDGSILDGRMLHL 423
>gi|322787083|gb|EFZ13307.1| hypothetical protein SINV_16564 [Solenopsis invicta]
Length = 859
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 178/351 (50%), Positives = 249/351 (70%), Gaps = 10/351 (2%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAFN + RS IILVKNLP T P +L+ F G+L R+++PP GIT LVEFL+ +
Sbjct: 486 LDAFNGAPKKRSNTIILVKNLPAETKPNELQERFAKHGELARIVMPPAGITALVEFLEPS 545
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF +LAYTK+K +PLYLEWAP+ F + K+K + + ++ + E+ K E T
Sbjct: 546 EARKAFQALAYTKYKHLPLYLEWAPDNSFTTSASKTKATKNKATTKKSTDSEKVKDEKTI 605
Query: 555 EEDNQQGVPEVEENV---EEDEEREP-EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
E+ ++ E+N E +E EP EPDTTL++KN+NF++TE+ ++ +F KCGP+ V
Sbjct: 606 EQSKEK-----EKNTRKKENNESTEPVEPDTTLFVKNINFSTTEEQLKDYFGKCGPLHYV 660
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
T+A K +P++P + LSMGYGF+++ + ++ALK LQ S LD +ELKRS R L S+
Sbjct: 661 TIATKMNPENPAEKLSMGYGFIRYKRKLDADRALKTLQMSVLDGKSLELKRSERTLMSDV 720
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
T RK S + +Q G+KILVRNIPFQA EV ELFK++GELK VRLPKK++G+ HRGF
Sbjct: 721 KTA-RKKSKITEQNGTKILVRNIPFQATIQEVTELFKSYGELKAVRLPKKLIGTEKHRGF 779
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
F+E+ TK +AK+A +ALCQSTHLYGRRLVLEWA+ + +E+IR+RT ++F
Sbjct: 780 AFIEYYTKTDAKKAFEALCQSTHLYGRRLVLEWAQAEEGIEEIRRRTAKHF 830
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 168/416 (40%), Positives = 241/416 (57%), Gaps = 36/416 (8%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T +LK F +KG VTDVQLKY +GKFRRFAFIGY E+QA+ A YF+ T + + +I
Sbjct: 1 VTDIKLKELFSQKGIVTDVQLKYKEDGKFRRFAFIGYKTEEQAKLAQSYFDQTCIDTCKI 60
Query: 89 KVEKCSNLGDTTKPK-----SWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKN 143
VE+C++LG K K S K + + K+ K E+ + K +K K
Sbjct: 61 SVEQCAHLGTCAKSKEKPIDSAEKNDISKTKDKIDKKKKKKKADKNENVEVKKALEKHKE 120
Query: 144 DPTFSDFLQLHGKDVSKLL-------PLSNKDGEEKEEENED-------ESNNQIAHADI 189
DP F +FL+ H +K++ P+ + EE ++E+ED ES ++ ++
Sbjct: 121 DPLFMEFLETHTSKDAKVIWKNDIDIPMKEEVTEESDDESEDKEDGESKESTGEVKLSNE 180
Query: 190 SDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLP 249
D ++K K + P P++ ++T+ ++ L KK +K +F+P+
Sbjct: 181 KDKPDWLCQSKIKSLTKAVPKHGPLT--------FYTVKMRGLAYKHMKKHIKQFFRPIK 232
Query: 250 LASVRT--TFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDN 307
S+R G+AY+GFK E+ KAL KNKSF +GKQ+ + KY + +D
Sbjct: 233 PKSIRVPQKIKGIAYVGFKTEQAMKKALMKNKSFLEGKQIFVSKYEQKEEI------EDF 286
Query: 308 NNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVI 367
N S K WK QE++++ E IAESGRIF+RNL+YTVTEDD+ KLFEKYGPL+EV
Sbjct: 287 NKDSCNKTNIK-WKKQEEALKNEESIAESGRIFIRNLTYTVTEDDIKKLFEKYGPLSEVD 345
Query: 368 LPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVD 423
LP+D+ T K KGF VTFLMPEHA +AY LDG+V GRMLH++PGK K + ++D
Sbjct: 346 LPVDRITRKPKGFGTVTFLMPEHAVKAYSELDGSVLDGRMLHILPGKTKASLEDID 401
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 145/338 (42%), Gaps = 49/338 (14%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYF-KPLPLASVRTTFLGM-AYIGFKDEKNCNKALNKN 278
KR I+VKNLPA K +L+ F K LA + G+ A + F + KA +
Sbjct: 495 KRSNTIILVKNLPAETKPNELQERFAKHGELARIVMPPAGITALVEFLEPSEARKAF-QA 553
Query: 279 KSFWKGKQLNIY-KYSKDNSAKYSGA---ADDN---NNASMENIKAKHWKSQEDSV---- 327
++ K K L +Y +++ DNS S + A N S ++ K K K+ E S
Sbjct: 554 LAYTKYKHLPLYLEWAPDNSFTTSASKTKATKNKATTKKSTDSEKVKDEKTIEQSKEKEK 613
Query: 328 --------QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKET 374
+ E + +FV+N++++ TE+ L F K GPL V + P +
Sbjct: 614 NTRKKENNESTEPVEPDTTLFVKNINFSTTEEQLKDYFGKCGPLHYVTIATKMNPENPAE 673
Query: 375 DKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERK 434
+ G+ + + A +A + L +V G+ L L K +E + V + K
Sbjct: 674 KLSMGYGFIRYKRKLDADRALKTLQMSVLDGKSLEL-----KRSERTLMSDVKTARKKSK 728
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GL 487
+ N ILV+N+P++ ++ LF+ +G+L V +P I
Sbjct: 729 ITEQNGTK-------ILVRNIPFQATIQEVTELFKSYGELKAVRLPKKLIGTEKHRGFAF 781
Query: 488 VEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWAP--EGV 522
+E+ K AK AF +L T L LEWA EG+
Sbjct: 782 IEYYTKTDAKKAFEALCQSTHLYGRRLVLEWAQAEEGI 819
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++I+NL + TED I++ F+K GP++ V + + + P G+G V F E +
Sbjct: 317 IFIRNLTYTVTEDDIKKLFEKYGPLSEVDLPVDRITRKPK-----GFGTVTFLMPEHAVK 371
Query: 643 ALKVLQNSSLDEHQIEL-----KRSNRNLESEATTVKRKSSNVAKQTG 685
A L S LD + + K S ++++E T K+K K T
Sbjct: 372 AYSELDGSVLDGRMLHILPGKTKASLEDIDTENLTYKQKKELQTKATA 419
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 131/303 (43%), Gaps = 49/303 (16%)
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
A K KE PL++E+ +AK K +EE E +++ E+ + ++++
Sbjct: 114 ALEKHKEDPLFMEFLETHTSKDAKVIWKNDIDIPMKEEVTEESDDESEDKEDGESKESTG 173
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV-----ARKKDP 618
EV+ + E+D +PD ++ S ++ +H GP+ TV A K
Sbjct: 174 EVKLSNEKD-----KPD---WLCQSKIKSLTKAVPKH----GPLTFYTVKMRGLAYKHMK 221
Query: 619 KSPGQFLS-------------MGYGFVQFYTRESLNQALKVLQNSS-LDEHQIELKRSNR 664
K QF G +V F T +++ +AL ++N S L+ QI + + +
Sbjct: 222 KHIKQFFRPIKPKSIRVPQKIKGIAYVGFKTEQAMKKAL--MKNKSFLEGKQIFVSKYEQ 279
Query: 665 NLESE--------ATTVKRKSSNVAKQT------GSKILVRNIPFQAKQSEVEELFKAFG 710
E E T +K K A + +I +RN+ + + ++++LF+ +G
Sbjct: 280 KEEIEDFNKDSCNKTNIKWKKQEEALKNEESIAESGRIFIRNLTYTVTEDDIKKLFEKYG 339
Query: 711 ELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNV 770
L V LP + + +GFG V F+ A +A L S L GR L + + ++
Sbjct: 340 PLSEVDLPVDRI-TRKPKGFGTVTFLMPEHAVKAYSELDGSV-LDGRMLHILPGKTKASL 397
Query: 771 EDI 773
EDI
Sbjct: 398 EDI 400
>gi|328791232|ref|XP_624611.3| PREDICTED: probable RNA-binding protein 19-like [Apis mellifera]
Length = 889
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 190/350 (54%), Positives = 250/350 (71%), Gaps = 13/350 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAFNQ RSK IIL KNLP T +++ LF G+LGRV++PP GIT LVEFL+ +
Sbjct: 526 LDAFNQPSNERSKTIILAKNLPAATSAQEIRQLFARHGELGRVVMPPSGITALVEFLEPS 585
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE---AKEKSKGKEKEKNEEEGEEGEEEKKE 551
+A+ A+ LAYTK+K +PLYLEWAP F K K+ + KEK E+E +E E +
Sbjct: 586 EARKAYTKLAYTKYKYLPLYLEWAPHNSFITPPAVKNKTINETKEKIEDEKQEKELSENV 645
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
N + N++ E ++E EPEPDTTL++KN+NF++T++ ++ +F KCGP+ V+
Sbjct: 646 NDTNKTNKE---------ESEDEEEPEPDTTLFVKNINFSTTDEQLKTYFDKCGPLHYVS 696
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
+A KKDPK+PG LSMGYGFV++ + ++ALKVLQ + LD +ELKRS R L ++
Sbjct: 697 IAMKKDPKNPGAKLSMGYGFVRYKRKADADRALKVLQMTVLDGKTLELKRSERTLTTDVK 756
Query: 672 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
+ K K+S V QTG+KIL+RN+PFQA E+ ELFKAFGELK VRLPKK+VG HRGF
Sbjct: 757 SAK-KTSTVKAQTGTKILIRNVPFQATAEEITELFKAFGELKAVRLPKKLVGVEKHRGFA 815
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
FVE+ TK+EAK+A KALCQSTHLYGRRLVLEWA+ + VEDIRKRT ++F
Sbjct: 816 FVEYYTKSEAKKAFKALCQSTHLYGRRLVLEWAQTEEGVEDIRKRTAKHF 865
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 181/437 (41%), Positives = 253/437 (57%), Gaps = 63/437 (14%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT +LK F +KG +TDVQLKYT +GKFRRFAFIG+ E+QA A +YF+ T + + RI
Sbjct: 13 ITDIKLKELFSQKGLITDVQLKYTKDGKFRRFAFIGFKTEEQAIVAKEYFDKTCIDTCRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDS------------- 135
VE+C++LGD++KP+SWSKYA DSS + + N D KPE+ +
Sbjct: 73 SVEQCASLGDSSKPRSWSKYASDSS--KNVINNKQSSD-KPENVNANKTTDKKKEKNKKD 129
Query: 136 ------KPG-----KKSKNDPTFSDFLQLHGKD--------VSKLLPLSNKDGEEKEEEN 176
KP +K KNDP F +FL+ H ++ + P + D + K+EE
Sbjct: 130 KKEENVKPEVKEALEKHKNDPLFMEFLESHTNKAIWNNDTILTTIQPKEHNDNDIKQEEK 189
Query: 177 EDESN--------------NQIAHADISDMEYLK-LKTKSKDTAPSDPSVPPVSKAPVHK 221
++E +IAH +SD+EY++ LK K K+ + P P+
Sbjct: 190 DEEEGEGEGEEEEETKEKEQKIAHKVVSDLEYMEALKNKEKNVQKKVSNDNPSKHGPL-- 247
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTT--FLGMAYIGFKDEKNCNKALNKNK 279
+ T+ ++ L KKKD+K +F PL S+R + G+AY+GFK ++ KAL KNK
Sbjct: 248 -KLFTVKLRGLAYNHKKKDIKQFFNPLKAKSIRISPKIKGIAYVGFKTPQHLRKALLKNK 306
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
SF G+Q+ + KY + K+ ++NN+ WK Q ++++ E IAESGR+
Sbjct: 307 SFLDGRQIFVIKY-ETKEQKFEEEQNENNHNV-------KWKKQAEALKSEESIAESGRM 358
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
F+RNLSYT TEDD+ KLFEKYGPL EV LPID+ T K KGF +TFLM EHA +AY LD
Sbjct: 359 FIRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKLKGFGTITFLMTEHAVKAYSELD 418
Query: 400 GTVFLGRMLHLIPGKPK 416
G++ GRMLHL+P K K
Sbjct: 419 GSILDGRMLHLLPAKMK 435
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 153/341 (44%), Gaps = 54/341 (15%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYF-KPLPLASVRTTFLGM-AYIGFKDEKNCNKAL 275
P ++R I+ KNLPA ++++ F + L V G+ A + F + KA
Sbjct: 532 PSNERSKTIILAKNLPAATSAQEIRQLFARHGELGRVVMPPSGITALVEFLEPSEARKAY 591
Query: 276 NKNKSFWKGKQLNIY-KYSKDNSAKYSGAADDNN-NASMENIKAKHWKSQEDSVQFAEDI 333
K ++ K K L +Y +++ NS A + N + E I+ ++ + +E++
Sbjct: 592 TK-LAYTKYKYLPLYLEWAPHNSFITPPAVKNKTINETKEKIE-----DEKQEKELSENV 645
Query: 334 AESGR-----------------IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
++ + +FV+N++++ T++ L F+K GPL V + + K+
Sbjct: 646 NDTNKTNKEESEDEEEPEPDTTLFVKNINFSTTDEQLKTYFDKCGPLHYVSIAMKKDPKN 705
Query: 377 -----TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCIS 431
+ G+ V + A +A + L TV G+ L L K E D K S
Sbjct: 706 PGAKLSMGYGFVRYKRKADADRALKVLQMTVLDGKTLEL---KRSERTLTTDVK-----S 757
Query: 432 ERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP--YGIT---- 485
+K V+A++ IL++N+P++ ++ LF+ FG+L V +P G+
Sbjct: 758 AKK----TSTVKAQTGTKILIRNVPFQATAEEITELFKAFGELKAVRLPKKLVGVEKHRG 813
Query: 486 -GLVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWAP--EGV 522
VE+ K++AK AF +L T L LEWA EGV
Sbjct: 814 FAFVEYYTKSEAKKAFKALCQSTHLYGRRLVLEWAQTEEGV 854
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
+R L+Y + D+ + F PL + I + K KG A V F P+H +A L
Sbjct: 254 LRGLAYNHKKKDIKQFF---NPLKAKSIRI---SPKIKGIAYVGFKTPQHLRKAL--LKN 305
Query: 401 TVFL-GRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVE---ARSKRIILVKNLP 456
FL GR + +I + KE + + + + K A E A S R+ ++NL
Sbjct: 306 KSFLDGRQIFVIKYETKEQKFEEEQNENNHNVKWKKQAEALKSEESIAESGRM-FIRNLS 364
Query: 457 YRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
Y T D++ LFE +G L V +P IT G + FL A A++ L
Sbjct: 365 YTTTEDDIRKLFEKYGPLTEVNLPIDRITRKLKGFGTITFLMTEHAVKAYSEL 417
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++I+NL++ +TED IR+ F+K GP+ V + + + G+G + F E +
Sbjct: 358 MFIRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKLK-----GFGTITFLMTEHAVK 412
Query: 643 ALKVLQNSSLDEHQIEL 659
A L S LD + L
Sbjct: 413 AYSELDGSILDGRMLHL 429
>gi|405963583|gb|EKC29145.1| Putative RNA-binding protein 19 [Crassostrea gigas]
Length = 878
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 185/354 (52%), Positives = 241/354 (68%), Gaps = 28/354 (7%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK ++LVKNLP T P DL+ +F G LGRVL+PP G+T +VE+L
Sbjct: 542 LDSFSQAAAPRSKTVLLVKNLPANTDPEDLQEVFSKHGALGRVLMPPSGVTAIVEYLDPT 601
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AK F +LAYTKF+ VPLYLEWAP VF + +EN
Sbjct: 602 EAKLGFRNLAYTKFQHVPLYLEWAPMEVFRKPA---------------------VRENKK 640
Query: 555 EEDNQQGVPEVEENVEEDEERE-------PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPI 607
+E G+PE E +E+ E PEPD+TL++KNLNF++TE+ +R+ FKKCG I
Sbjct: 641 QESADSGIPEKEAGADEESSGESGEEDAGPEPDSTLFVKNLNFSTTEEGLRQKFKKCGAI 700
Query: 608 ASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLE 667
+V+VA+KKD K+PG++LSMGYGFV+F +ES +ALK LQ++ LD H +ELK SNR
Sbjct: 701 RAVSVAKKKDMKNPGKYLSMGYGFVEFQKKESAMKALKELQHTELDGHMVELKLSNRTTL 760
Query: 668 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 727
+K V KQ +KILVRNIPF+AK+ E+ ELFK FGELKFVRLPKKM G+G H
Sbjct: 761 GTQKVTTKKKQKVKKQKTTKILVRNIPFEAKKQEIYELFKVFGELKFVRLPKKMGGTGSH 820
Query: 728 RGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
RGFGFV+F+T+ +AKRA ALC STHLYGRRLVLEWAE A++++ +RK+T +F
Sbjct: 821 RGFGFVDFLTRQDAKRAFDALCHSTHLYGRRLVLEWAESAEDLDQLRKKTAEHF 874
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/455 (32%), Positives = 239/455 (52%), Gaps = 61/455 (13%)
Query: 10 VPRNHISLLDLDEVEFIYK-------ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAF 62
VP +H L E ++ I +E+L++ F GT+TD LKYT EG FR FAF
Sbjct: 4 VPEDHPRLFPWQEFTCQFQGLVTSPNIKEEKLRSMFGSVGTLTDCSLKYTKEGVFRNFAF 63
Query: 63 IGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIA 122
IGY E +A A++ +N T++ + RI VEK + D++KP++WSKY+ DSSA+QK
Sbjct: 64 IGYTSETEADQAINQYNKTFINACRIYVEKAKDFSDSSKPRAWSKYSRDSSAFQKKQKSL 123
Query: 123 PKQDLKPEHTKDSKPGKKS----------------KNDPTFSDFLQLHGKDVSK------ 160
Q + + K K+ K+DP F +F+Q H + ++K
Sbjct: 124 EDQQNENTKNTEKKEKKEKKKKSREKVVAEMLGELKDDPKFEEFVQAHQRSMNKSVWGND 183
Query: 161 -LLPLSNKDGEEKEEENEDE---------------SNNQIAHADISDMEYLKLKTKSKDT 204
+LP GE +EE+++ S + + + + +K +D
Sbjct: 184 EVLP----SGEGVQEEDKERIKYDKDNDDDDDGDGSGEEDNKEEEEEGGEELMGSKEEDK 239
Query: 205 APSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT------TFL 258
+ +V + +Q + + ++NLP +K LK +F P+ +R +
Sbjct: 240 VATKKNVSDLDSEET--KQKYMLKMRNLPVSAGEKALKEFFNPIKPKDIRIPKNNQKKSI 297
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G+AY+ F EK+ N A+ +NK+F K K++ + K ++ A ++++ K
Sbjct: 298 GVAYVDFSSEKDLNDAMRRNKNFIKSKRVYLKKCETGEETAVQSEEKESQQA-VQSVDRK 356
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK 378
W+ E + + +AE+GR+FVRNL+Y T++DL +LF K+GP+AEV L ID T K +
Sbjct: 357 TWEEHESQM---DSVAETGRLFVRNLAYNCTQEDLEELFGKFGPIAEVHLSIDTITKKIR 413
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPG 413
G+A + F+MPEHA +AY+ LDGT+F+GRMLH++PG
Sbjct: 414 GYAFILFMMPEHAVRAYEELDGTIFMGRMLHILPG 448
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 138/318 (43%), Gaps = 33/318 (10%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYF-KPLPLASVRTTFLGM-AYIGFKDEKNCNKALNKNK 279
R ++VKNLPA +DL+ F K L V G+ A + + D +N
Sbjct: 552 RSKTVLLVKNLPANTDPEDLQEVFSKHGALGRVLMPPSGVTAIVEYLDPTEAKLGF-RNL 610
Query: 280 SFWKGKQLNIY-KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG- 337
++ K + + +Y +++ + ++ S ++ + ++ ++G
Sbjct: 611 AYTKFQHVPLYLEWAPMEVFRKPAVRENKKQESADSGIPEKEAGADEESSGESGEEDAGP 670
Query: 338 ----RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMP 388
+FV+NL+++ TE+ L + F+K G + V + K+ + G+ V F
Sbjct: 671 EPDSTLFVKNLNFSTTEEGLRQKFKKCGAIRAVSVAKKKDMKNPGKYLSMGYGFVEFQKK 730
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
E A +A + L T G M+ L K + G +++ Q V+ +
Sbjct: 731 ESAMKALKELQHTELDGHMVEL-----KLSNRTTLG------TQKVTTKKKQKVKKQKTT 779
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT------GLVEFLQKNQAKAAFN 501
ILV+N+P+ ++ LF+ FG+L V +P G T G V+FL + AK AF+
Sbjct: 780 KILVRNIPFEAKKQEIYELFKVFGELKFVRLPKKMGGTGSHRGFGFVDFLTRQDAKRAFD 839
Query: 502 SLAY-TKFKEVPLYLEWA 518
+L + T L LEWA
Sbjct: 840 ALCHSTHLYGRRLVLEWA 857
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 33/212 (15%)
Query: 568 NVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP--GQFL 625
NV + + E + L ++NL ++ E +++ F P KD + P Q
Sbjct: 245 NVSDLDSEETKQKYMLKMRNLPVSAGEKALKEFFNPIKP---------KDIRIPKNNQKK 295
Query: 626 SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK--- 682
S+G +V F + + LN A++ +N + ++ LK+ E+ + +++S +
Sbjct: 296 SIGVAYVDFSSEKDLNDAMRRNKNF-IKSKRVYLKKCETGEETAVQSEEKESQQAVQSVD 354
Query: 683 ---------------QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 727
+TG ++ VRN+ + Q ++EELF FG + V L + +
Sbjct: 355 RKTWEEHESQMDSVAETG-RLFVRNLAYNCTQEDLEELFGKFGPIAEVHLSIDTITKKI- 412
Query: 728 RGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
RG+ F+ F+ A RA + L T GR L
Sbjct: 413 RGYAFILFMMPEHAVRAYEEL-DGTIFMGRML 443
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNS 502
E + K ++ ++NLP LK F P + P I + KN K +
Sbjct: 253 ETKQKYMLKMRNLPVSAGEKALKEFFNP--------IKPKDIR-----IPKNNQKKSIGV 299
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKG--KEKEKNEEEGEEGEEEKKENTAEEDNQQ 560
Y++++ E +A ++K K K ++ E GEE + + E+++QQ
Sbjct: 300 A----------YVDFSSEKDLNDAMRRNKNFIKSKRVYLKKCETGEETAVQ-SEEKESQQ 348
Query: 561 GVPEVEENVEEDEEREPEPDTT-----LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARK 615
V V+ E E E + D+ L+++NL +N T++ + F K GPIA V ++
Sbjct: 349 AVQSVDRKTWE--EHESQMDSVAETGRLFVRNLAYNCTQEDLEELFGKFGPIAEVHLSID 406
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNS 650
K GY F+ F E +A + L +
Sbjct: 407 TITKK-----IRGYAFILFMMPEHAVRAYEELDGT 436
>gi|380018594|ref|XP_003693212.1| PREDICTED: probable RNA-binding protein 19-like [Apis florea]
Length = 900
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/347 (54%), Positives = 250/347 (72%), Gaps = 8/347 (2%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAFNQ RSK IILVKNLP T +++ LF G+LGRV++PP GIT LVEFL+ +
Sbjct: 538 LDAFNQPSSERSKTIILVKNLPAATPAQEIRQLFARHGELGRVVMPPSGITALVEFLEPS 597
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAYTK+K +PLYLEWAP+ F K+K + E N++ E+ E+E EN
Sbjct: 598 EARKAFTKLAYTKYKHLPLYLEWAPDNSFITPAIKNKTIKDETNKKTEEKQEKELLENVN 657
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ + E ++E EPEPDTTL++KN+NF++T++ ++ +F KCGP+ V++A
Sbjct: 658 DTNKVN-------KEESEDEDEPEPDTTLFVKNINFSTTDEQLKSYFDKCGPLHYVSIAT 710
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
KKDPK+PG LSMGYGFV++ + ++ALKVLQ + LD +ELKRS R L ++ + K
Sbjct: 711 KKDPKNPGAKLSMGYGFVRYKRKADADRALKVLQMTVLDGKTLELKRSERTLTTDVKSAK 770
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
K+S V QTG+KIL+RN+PFQA E+ ELFKAFGELK VRLPKK+VG HRGF FVE
Sbjct: 771 -KTSTVKAQTGTKILIRNVPFQATAEEITELFKAFGELKAVRLPKKLVGVEKHRGFAFVE 829
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+ TK+EAK+A KALCQSTHLYGRRLVLEWA+ + VEDIRKRT ++F
Sbjct: 830 YYTKSEAKKAFKALCQSTHLYGRRLVLEWAQTEEGVEDIRKRTAKHF 876
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 181/444 (40%), Positives = 246/444 (55%), Gaps = 67/444 (15%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT +LK F EKG +TDVQLKYT +GKFRRFAFIG+ E+QA AA +YF+ T + + RI
Sbjct: 13 ITDTKLKEFFSEKGLITDVQLKYTKDGKFRRFAFIGFKTEEQAIAAKEYFDKTCIDTCRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSA--------YQKLH--NIAPKQDLKPEHTKDSK-- 136
VE+C++LGD++KP+SWSKYA DSS K+ N+ D K E K K
Sbjct: 73 SVEQCASLGDSSKPRSWSKYASDSSRNVINNKQFNDKIENGNVNKTIDKKEERNKKDKKE 132
Query: 137 ---------PGKKSKNDPTFSDFLQLHGKD--------VSKLLPLSNKDGEEKEEENEDE 179
+K KNDP F +FL+ H ++ + P D E EN+ +
Sbjct: 133 ENVKPEVKEALEKHKNDPLFMEFLESHTNKAIWNNDTILTNIQPKEYNDNEINSIENDIK 192
Query: 180 SN------------------------NQIAHADISDMEYLK-LKTKSKDTAPSDPSVPPV 214
N +IAH +SD+EY++ LK K K+ +
Sbjct: 193 DNIKQEEKDEEEEEEEEKEKERKEKEQKIAHKVVSDLEYMEALKNKEKNVQNKVSNGNTS 252
Query: 215 SKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTT--FLGMAYIGFKDEKNCN 272
P+ + T+ ++ L KKKD+K +F PL S+R + G+AY+GFK ++
Sbjct: 253 IHGPL---KLFTVKLRGLAYNHKKKDIKQFFSPLKAKSIRISPKIKGIAYVGFKTPQHLR 309
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
KAL KNKSF G+Q+ + KY ++N+N WK Q ++++ E
Sbjct: 310 KALLKNKSFLDGRQIFVIKYEVKEEKFKEEQNENNDNVK--------WKKQAEALKSEES 361
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
IAESGR+F+RNLSYT TEDD+ KLFEKYGPL EV LPID+ T K+KGF +TFLM EHA
Sbjct: 362 IAESGRMFIRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKSKGFGTITFLMTEHAV 421
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPK 416
+AY LDG++ GRMLHL+P K K
Sbjct: 422 KAYSELDGSILDGRMLHLLPAKMK 445
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 151/335 (45%), Gaps = 43/335 (12%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYF-KPLPLASVRTTFLGM-AYIGFKDEKNCNKAL 275
P +R I+VKNLPA ++++ F + L V G+ A + F + KA
Sbjct: 544 PSSERSKTIILVKNLPAATPAQEIRQLFARHGELGRVVMPPSGITALVEFLEPSEARKAF 603
Query: 276 NKNKSFWKGKQLNIY-KYSKDNS-----AKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
K ++ K K L +Y +++ DNS K D+ N + E + + ++ D+ +
Sbjct: 604 TK-LAYTKYKHLPLYLEWAPDNSFITPAIKNKTIKDETNKKTEEKQEKELLENVNDTNKV 662
Query: 330 -------AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----T 377
++ +FV+N++++ T++ L F+K GPL V + K+ +
Sbjct: 663 NKEESEDEDEPEPDTTLFVKNINFSTTDEQLKSYFDKCGPLHYVSIATKKDPKNPGAKLS 722
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
G+ V + A +A + L TV G+ L L K E D K S +K
Sbjct: 723 MGYGFVRYKRKADADRALKVLQMTVLDGKTLEL---KRSERTLTTDVK-----SAKK--- 771
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP--YGIT-----GLVEF 490
V+A++ IL++N+P++ ++ LF+ FG+L V +P G+ VE+
Sbjct: 772 -TSTVKAQTGTKILIRNVPFQATAEEITELFKAFGELKAVRLPKKLVGVEKHRGFAFVEY 830
Query: 491 LQKNQAKAAFNSLAY-TKFKEVPLYLEWAP--EGV 522
K++AK AF +L T L LEWA EGV
Sbjct: 831 YTKSEAKKAFKALCQSTHLYGRRLVLEWAQTEEGV 865
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++I+NL++ +TED IR+ F+K GP+ V + + + S G+G + F E +
Sbjct: 368 MFIRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRK-----SKGFGTITFLMTEHAVK 422
Query: 643 ALKVLQNSSLDEHQIEL 659
A L S LD + L
Sbjct: 423 AYSELDGSILDGRMLHL 439
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 77/181 (42%), Gaps = 35/181 (19%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
+R L+Y + D+ + F PL + I + K KG A V F P+H +A L
Sbjct: 264 LRGLAYNHKKKDIKQFF---SPLKAKSIRI---SPKIKGIAYVGFKTPQHLRKAL--LKN 315
Query: 401 TVFL-GRMLHLIPGKPKE---------NEGNVDGK--VHCCISERKLDAFNQVVEARSKR 448
FL GR + +I + KE N NV K SE + A S R
Sbjct: 316 KSFLDGRQIFVIKYEVKEEKFKEEQNENNDNVKWKKQAEALKSEESI--------AESGR 367
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNS 502
+ ++NL Y T D++ LFE +G L V +P IT G + FL A A++
Sbjct: 368 M-FIRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKSKGFGTITFLMTEHAVKAYSE 426
Query: 503 L 503
L
Sbjct: 427 L 427
>gi|291232095|ref|XP_002735981.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Saccoglossus kowalevskii]
Length = 861
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 181/356 (50%), Positives = 242/356 (67%), Gaps = 21/356 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RS +ILVKNLP TLP +L+ +F FG+LGR+L+PP G+TG+VEFL+ N
Sbjct: 490 LDSFSQAAAPRSSTVILVKNLPAATLPEELRHVFSKFGELGRILLPPAGVTGIVEFLETN 549
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEE-KKENT 553
+AK AF LAYTKF+ VPLYLEWAP G+F EK +G + E + E+ E KKE+
Sbjct: 550 EAKLAFRKLAYTKFQHVPLYLEWAPVGIFTTPAEKKEGIKDELMASDKEQSTTEGKKEDV 609
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
E+++++ E E TL++KNLNF +TE + F CGP+ V+++
Sbjct: 610 TEQEDEESSSEDEIEE----------GCTLFVKNLNFETTETGVIEKFSVCGPVKHVSIS 659
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRN-------L 666
+KKD K PG+FLSMGYGFV++ RES N+ALKVLQ+ LD+HQ+ELK SNR
Sbjct: 660 KKKDMKQPGKFLSMGYGFVEYKNRESANKALKVLQHCMLDDHQVELKMSNRATVQSLLLF 719
Query: 667 ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 726
T RK KQ +KILVRN+PF+A + E++ELF FGE+K +R+PKK SG
Sbjct: 720 HRPKPTSTRKKQVTKKQKSTKILVRNLPFEATRREIQELFSTFGEIKSIRIPKK--ASGT 777
Query: 727 HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVEDIRKRTNRYF 781
HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++D+V+ +RK+T +F
Sbjct: 778 HRGFGFVDFLTKQDAKRAFSALCHSTHLYGRRLVLEWADTDSDSVDALRKKTAAHF 833
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 156/342 (45%), Gaps = 84/342 (24%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ K F E+G +TDVQLKYT +G FRRF FIGY QA++++ +FN T++ +S+I
Sbjct: 13 MKEEKFKNLFSERGEITDVQLKYTKDGIFRRFGFIGYKTATQAKSSMKHFNGTFIDTSKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKP--EHTKDSKPGKKSKN--- 143
V+ NL D P+ WSKY S QK+ + K+ K + ++D KK+K
Sbjct: 73 SVQIAMNLTDDNLPRPWSKY----SQRQKIQDKITKEREKESGKKSQDENQPKKTKKKLQ 128
Query: 144 -------DPTFSDFLQLHGKDVSKLLPLSN------KDGEEKEEEN-------------- 176
DP F +FL+ H K S + +N +D + ++EN
Sbjct: 129 LFEELDEDPIFQEFLETH-KTRSTVQAWTNDAMVTTQDKKSSKDENKQKDVKYDDDVQSD 187
Query: 177 EDESNNQIAHA---------------DISDMEYLKLK-TKS---KDTAPSDPSV------ 211
++E + IA D+SDM+YL+ K KS +D + D
Sbjct: 188 DEEIFDPIAGKVEETKKEKKSTKPAKDLSDMDYLRSKMVKSDLVQDASEDDAETKDEKKP 247
Query: 212 ---------------PPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTT 256
++ + K ++ I ++ +P +K++ +F P+ + ++
Sbjct: 248 PSGKKKKKKRKKKNKSAAARGKIPKGEF-VIEMRGIPFYCSEKEISEFFAPIEVVAIHIV 306
Query: 257 ------FLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKY 292
LG A + K+E + +A+ ++K + +G+ + I Y
Sbjct: 307 KNKNGKQLGFARVELKNENDLKEAMTRHKDYMRGRCIEIALY 348
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 23/195 (11%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+FV+NL++ TE + + F GP+ V + K+ + + G+ V + E A +
Sbjct: 629 LFVKNLNFETTETGVIEKFSVCGPVKHVSISKKKDMKQPGKFLSMGYGFVEYKNRESANK 688
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCC----ISERKLDAFNQVVEARSKRI 449
A + L + + L N V + S RK QV + +
Sbjct: 689 ALKVLQHCMLDDHQVEL----KMSNRATVQSLLLFHRPKPTSTRK----KQVTKKQKSTK 740
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLA 504
ILV+NLP+ +++ LF FG++ + +P G V+FL K AK AF++L
Sbjct: 741 ILVRNLPFEATRREIQELFSTFGEIKSIRIPKKASGTHRGFGFVDFLTKQDAKRAFSALC 800
Query: 505 Y-TKFKEVPLYLEWA 518
+ T L LEWA
Sbjct: 801 HSTHLYGRRLVLEWA 815
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+I+V+N+P K+ + + LF GE+ V+L K G+ R FGF+ + T +AK +M
Sbjct: 2 SRIIVKNLPKGMKEEKFKNLFSERGEITDVQL--KYTKDGIFRRFGFIGYKTATQAKSSM 59
Query: 746 K 746
K
Sbjct: 60 K 60
>gi|442749963|gb|JAA67141.1| Putative rna-binding protein rrm superfamily [Ixodes ricinus]
Length = 863
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 187/350 (53%), Positives = 248/350 (70%), Gaps = 13/350 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF + RSK +ILVKNLP +T P +++ F FG L RV++PP+G+ LVEF + +
Sbjct: 494 LDAFCRPATERSKTVILVKNLPAKTHPDEIRDAFAKFGTLSRVVLPPWGVCALVEFQEPS 553
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY+KFK VPLYLEWAP GVF KEK+ EG +++ A
Sbjct: 554 EARTAFRRLAYSKFKHVPLYLEWAPIGVF---------KEKKTVPTPTLEGVTKEEPTKA 604
Query: 555 EEDNQQGVPEVEENVEEDEEREPEP-DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
ED ++ + E EE+EE EP DTTL++KNLNF++TED++R HF CGPI VT+A
Sbjct: 605 SEDGEKEAEKAERQEEEEEEEEPPEPDTTLFVKNLNFSTTEDALREHFAGCGPIHEVTIA 664
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR-NLESEATT 672
+KKD K+PG+ LSMGYGFVQF ++S +ALK LQ+S LDEH +ELK S R + A
Sbjct: 665 KKKDLKNPGKMLSMGYGFVQFKLKQSAKKALKQLQHSKLDEHAVELKLSKRETAQQTAAE 724
Query: 673 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
+KRK +++ K++ +KILVRNIPF+A + E++ELF FG L+ +RLPKKM G+G HRGF F
Sbjct: 725 LKRKKTDLGKES-TKILVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRGFAF 783
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN-VEDIRKRTNRYF 781
V+F+TKN+AKRA +ALCQSTHLYGRRLVLEWA D V+ +RK+T +F
Sbjct: 784 VDFLTKNDAKRAFQALCQSTHLYGRRLVLEWASSDDQEVDTLRKKTADHF 833
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/420 (39%), Positives = 237/420 (56%), Gaps = 53/420 (12%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
++ +++L+ F KGT+TD+QLKYT EG FRRFAF+GY E QA A +YF+N Y+ +S+
Sbjct: 12 RVKEDRLREFFSSKGTITDLQLKYTKEGVFRRFAFVGYKDEAQAAVAKEYFHNAYLDTSK 71
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPK-----------QDLKPEHTKDSK 136
++V+ C LGD KP++WSKY+ DSSAYQK+H K Q+ KD +
Sbjct: 72 LQVDICKALGDAEKPRAWSKYSKDSSAYQKMHPEEKKPKPPKPEKPKKQNFAEAFLKDLE 131
Query: 137 PGKKSKNDPTFSDFLQLHGKDVSKL-----LPLSNKDGEEKEEENEDESNNQIAHADISD 191
+ F +FL++H + + P + + K+ ++ E NN+ A D
Sbjct: 132 ------GNEEFEEFLEVHSANKAAWGNDTRAPANTTVAKSKKGGSDREKNNEQEAALEDD 185
Query: 192 MEYLKLKTKSKDTAP----------SDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDL 241
E K+K TAP D SK PV + + ++ V LP KKK +
Sbjct: 186 TEPHSKDNKTKGTAPEKASQGQPKEGDGQKDTKSKLPVQEFNF-SLKVSGLPYKCKKKQI 244
Query: 242 KAYFKPLPLASVRT--TFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAK 299
K +FKP+ +AS+R G+AY+GFK EK +ALNK++SF G +L + KYSK
Sbjct: 245 KDFFKPVKVASLRVPPRIKGIAYLGFKTEKEMKQALNKHRSFMAGHKLEVTKYSK----- 299
Query: 300 YSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEK 359
+ + + W+ E E +A++GRIFVRNLSYTVTEDD+ LF+K
Sbjct: 300 -------------KLVPEQKWRKFESFGDPTETLADTGRIFVRNLSYTVTEDDIEALFKK 346
Query: 360 YGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
+GP++EV L IDK T K KGFA V+F+ PEHA +A+ LDG + GR+LHLIP K K +E
Sbjct: 347 FGPISEVHLSIDKITRKPKGFAFVSFMFPEHAIKAFSELDGKLLQGRLLHLIPAKAKNSE 406
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 24/193 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+FV+NL+++ TED L + F GP+ EV + K+ + G+ V F + + A +
Sbjct: 634 LFVKNLNFSTTEDALREHFAGCGPIHEVTIAKKKDLKNPGKMLSMGYGFVQFKLKQSAKK 693
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + L + + L K ++ + + +K D + + ILV+
Sbjct: 694 ALKQLQHSKLDEHAVEL-----KLSKRETAQQTAAELKRKKTDLGKESTK------ILVR 742
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP-PYGITG------LVEFLQKNQAKAAFNSLAY- 505
N+P+ +L+ LF FG L + +P TG V+FL KN AK AF +L
Sbjct: 743 NIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRGFAFVDFLTKNDAKRAFQALCQS 802
Query: 506 TKFKEVPLYLEWA 518
T L LEWA
Sbjct: 803 THLYGRRLVLEWA 815
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 29/250 (11%)
Query: 526 AKEKSKGKEKEKNEEEGEEGEEE--------KKENTAEEDNQQGVPEVEENVEEDEEREP 577
AK K G ++EKN E+ E++ K + TA E QG P+ + ++ + + P
Sbjct: 163 AKSKKGGSDREKNNEQEAALEDDTEPHSKDNKTKGTAPEKASQGQPKEGDGQKDTKSKLP 222
Query: 578 --EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
E + +L + L + + I+ FK +AS+ V + G ++ F
Sbjct: 223 VQEFNFSLKVSGLPYKCKKKQIKDFFKPV-KVASLRVPPR----------IKGIAYLGFK 271
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS----SNVAKQTGSKILVR 691
T + + QAL S + H++E+ + ++ L E K +S + TG +I VR
Sbjct: 272 TEKEMKQALNK-HRSFMAGHKLEVTKYSKKLVPEQKWRKFESFGDPTETLADTG-RIFVR 329
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
N+ + + ++E LFK FG + V L + + +GF FV F+ A +A L
Sbjct: 330 NLSYTVTEDDIEALFKKFGPISEVHLSIDKI-TRKPKGFAFVSFMFPEHAIKAFSEL-DG 387
Query: 752 THLYGRRLVL 761
L GR L L
Sbjct: 388 KLLQGRLLHL 397
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++++NL++ TED I FKK GPI+ V ++ K + P G+ FV F E +
Sbjct: 326 IFVRNLSYTVTEDDIEALFKKFGPISEVHLSIDKITRKP-----KGFAFVSFMFPEHAIK 380
Query: 643 AL-----KVLQNSSLDEHQIELKRSN 663
A K+LQ L H I K N
Sbjct: 381 AFSELDGKLLQGRLL--HLIPAKAKN 404
>gi|189235137|ref|XP_001807432.1| PREDICTED: similar to RBD protein [Tribolium castaneum]
gi|270003801|gb|EFA00249.1| hypothetical protein TcasGA2_TC003078 [Tribolium castaneum]
Length = 840
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 182/351 (51%), Positives = 232/351 (66%), Gaps = 24/351 (6%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+LDAF+ RSK +ILVKNLP +T +++ +FE FG +GR+++PP GIT +VEFL+
Sbjct: 499 QLDAFSNNKCKRSKTVILVKNLPNKTEAKEIRTIFEKFGLVGRLILPPSGITAIVEFLEP 558
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
++A+ AF LAYTKFK VPLYLEWAPE E KE
Sbjct: 559 SEARKAFTCLAYTKFKNVPLYLEWAPENSLGERKEPP----------------------V 596
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
ED + N E+ E EPDTTL++KNLNF +T+D +R+HF+ CG +A +VA
Sbjct: 597 TNEDTTEVKQSENNNEVEETVEESEPDTTLFVKNLNFQTTDDGLRKHFESCGKLAYASVA 656
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
KKD P + LSMGYGFV+F + S ++ALK LQ S+LD +ELKRS R L +E V
Sbjct: 657 TKKDKNDPSKRLSMGYGFVRFIHKSSADKALKTLQQSTLDGKSLELKRSERTLNNEVKVV 716
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM-VGSGLHRGFGF 732
K KS+ KQTG+KILVRNIPFQA Q E+ ELF FGE+K +RLPKKM + G HRGF F
Sbjct: 717 K-KSTKATKQTGTKILVRNIPFQANQKEIRELFSVFGEIKALRLPKKMALDGGSHRGFAF 775
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGT 783
V+F+ ++AK A +ALCQSTHLYGRRLVLEWA D+V+DIRKRT +F T
Sbjct: 776 VDFVAASDAKNAFEALCQSTHLYGRRLVLEWASSEDSVDDIRKRTAAHFQT 826
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/416 (43%), Positives = 264/416 (63%), Gaps = 46/416 (11%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+E+L+ F+EKGT+TDVQLKYT EGKFR FAF+GY E++AQ A+ +F+ ++ + +I
Sbjct: 13 ITEEKLRNLFQEKGTITDVQLKYTPEGKFREFAFVGYQNENEAQEAIKHFDGMFMHTRKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDL--KPEHTKDSKPG-------K 139
KVE C+ LGD+ KPK+WSKYAP+S+AY+K H I K++ KP+ K ++ K
Sbjct: 73 KVEPCALLGDSKKPKAWSKYAPESTAYKKAHGILTKEEDNDKPKVAKKNQKEDETIELLK 132
Query: 140 KSKNDPTFSDFLQLHGKDVSKLL-------------PLSNKD---GEEKEEENEDESNNQ 183
K ++DP F +FL+LH + SK L S +D G E ++++E+ ++
Sbjct: 133 KYQDDPMFEEFLELHNPEESKKLRKIIEKQKEHDVKSESEEDEGKGSSSENDSDEETQDR 192
Query: 184 IAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKA 243
+A ISD+EY+K K K+ K K T+ ++ LP +KKD+K
Sbjct: 193 LADQKISDLEYMKKLVKKKEK----------PKKEPKKLDLFTLKLRGLPYNSRKKDIKQ 242
Query: 244 YFKPLPLASVR--TTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYS 301
+ KP+ S+R G+AY+GFK EK+ KAL K++SF GK++++ +YS N+ ++
Sbjct: 243 FLKPVTPFSIRLPAKIHGIAYVGFKTEKDYKKALLKDRSFIAGKRISVMEYSGKNNTEHE 302
Query: 302 GAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYG 361
+ +NN K W SQE++++ EDIAE+G+IFVRNL+YT TEDD+ LF K+G
Sbjct: 303 ---ETSNNVR------KKWVSQEEALKNEEDIAETGKIFVRNLAYTTTEDDVENLFSKFG 353
Query: 362 PLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
PLAEV LP+D + K KGF VTF+MPEHA +AY LDG++ GRM+HL+PGK K+
Sbjct: 354 PLAEVNLPVDPTSKKIKGFGTVTFVMPEHAARAYGELDGSILHGRMVHLLPGKSKD 409
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 138/321 (42%), Gaps = 45/321 (14%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS--VRTTFLGMAYIGFKDEKNCNKALNKN 278
KR I+VKNLP + K+++ F+ L + A + F + KA
Sbjct: 509 KRSKTVILVKNLPNKTEAKEIRTIFEKFGLVGRLILPPSGITAIVEFLEPSEARKAFT-C 567
Query: 279 KSFWKGKQLNIY-KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG 337
++ K K + +Y +++ +NS G + + + + K ++ + + E+
Sbjct: 568 LAYTKFKNVPLYLEWAPENSL---GERKEPPVTNEDTTEVKQSENNNEVEETVEESEPDT 624
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHAT 392
+FV+NL++ T+D L K FE G LA + K+ + + G+ V F+ A
Sbjct: 625 TLFVKNLNFQTTDDGLRKHFESCGKLAYASVATKKDKNDPSKRLSMGYGFVRFIHKSSAD 684
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI--- 449
+A + L + G+ L L SER L+ +VV+ +K
Sbjct: 685 KALKTLQQSTLDGKSLELKR------------------SERTLNNEVKVVKKSTKATKQT 726
Query: 450 ---ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGITG-------LVEFLQKNQAKA 498
ILV+N+P++ +++ LF FG++ + +P + G V+F+ + AK
Sbjct: 727 GTKILVRNIPFQANQKEIRELFSVFGEIKALRLPKKMALDGGSHRGFAFVDFVAASDAKN 786
Query: 499 AFNSLAY-TKFKEVPLYLEWA 518
AF +L T L LEWA
Sbjct: 787 AFEALCQSTHLYGRRLVLEWA 807
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 651 SLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFG 710
+L E QI + ++ + LE E + S+N K++ + ILV+N+P + + E+ +F+ FG
Sbjct: 479 ALGETQI-VAQTRKYLEQEGVQLDAFSNNKCKRSKTVILVKNLPNKTEAKEIRTIFEKFG 537
Query: 711 ELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
+ + LP SG+ VEF+ +EA++A L T L LEWA E
Sbjct: 538 LVGRLILPP----SGIT---AIVEFLEPSEARKAFTCLAY-TKFKNVPLYLEWAPE 585
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 128/286 (44%), Gaps = 47/286 (16%)
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEK-----NEEEGEEGEEEKKENTAEEDNQ-- 559
K+++ P++ E+ E+K+ K EK+K +E E +EG+ EN ++E+ Q
Sbjct: 133 KYQDDPMFEEFLELHNPEESKKLRKIIEKQKEHDVKSESEEDEGKGSSSENDSDEETQDR 192
Query: 560 ---QGVPEVEENVEEDEEREPEPDT-------TLYIKNLNFNSTEDSIRRHFKKCGPIAS 609
Q + ++E + +++E TL ++ L +NS + I++ K P +
Sbjct: 193 LADQKISDLEYMKKLVKKKEKPKKEPKKLDLFTLKLRGLPYNSRKKDIKQFLKPVTPFSI 252
Query: 610 VTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK----RSNRN 665
+ P + G +V F T + +AL + S + +I + ++N
Sbjct: 253 ---------RLPAKI--HGIAYVGFKTEKDYKKAL-LKDRSFIAGKRISVMEYSGKNNTE 300
Query: 666 LESEATTVKRK----------SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFV 715
E + V++K ++A +TG KI VRN+ + + +VE LF FG L V
Sbjct: 301 HEETSNNVRKKWVSQEEALKNEEDIA-ETG-KIFVRNLAYTTTEDDVENLFSKFGPLAEV 358
Query: 716 RLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
LP + +GFG V F+ A RA L S L+GR + L
Sbjct: 359 NLPVDPTSKKI-KGFGTVTFVMPEHAARAYGELDGSI-LHGRMVHL 402
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+ V+NL +TE+ L LF++ G + +V L E K + FA V + A +A +H
Sbjct: 3 RLVVKNLPKNITEEKLRNLFQEKGTITDVQLKYTPE-GKFREFAFVGYQNENEAQEAIKH 61
Query: 398 LDGTVFLGRMLHLIP 412
DG R + + P
Sbjct: 62 FDGMFMHTRKIKVEP 76
>gi|242013547|ref|XP_002427466.1| RNA binding motif protein, putative [Pediculus humanus corporis]
gi|212511852|gb|EEB14728.1| RNA binding motif protein, putative [Pediculus humanus corporis]
Length = 846
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/354 (51%), Positives = 241/354 (68%), Gaps = 13/354 (3%)
Query: 435 LDAF-NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
LD+F N V RS +ILVKNLP+ T ++ F FG L RV+VPP G+ LVEF +
Sbjct: 503 LDSFENMSVSPRSNTVILVKNLPFGTTSEEISEKFRKFGLLSRVVVPPSGVAALVEFAEP 562
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFA-EAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
++A+ AF L+Y+KFK VPLYLEWAPE VF+ EAK K EK E E E+ +N
Sbjct: 563 SEARIAFRRLSYSKFKHVPLYLEWAPEKVFSTEAKPVEKI---EKTCNENLESEKSTNQN 619
Query: 553 -TAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
+AE + Q+ +EE +R PE T +++KNLNF + E S+R+HF+ CG + SVT
Sbjct: 620 QSAENETQKTTGTIEE------QRVPEEGTVIFVKNLNFATNESSLRKHFEACGTVLSVT 673
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
+ARKKDPK PG+ LSMGYGFV+F +E ++ALK LQ ++LD+H+IELKRSNR S A
Sbjct: 674 IARKKDPKEPGKSLSMGYGFVEFSLKEEADKALKTLQFTNLDDHKIELKRSNRTT-SVAN 732
Query: 672 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
T R + ++ SKILVRN+PFQA + E+ +LFK FGE+K +RLPKK+VGSG HRGF
Sbjct: 733 TNSRNTYKKCEKPSSKILVRNVPFQATKREIGDLFKVFGEIKAIRLPKKLVGSGSHRGFC 792
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTAV 785
FVE+ T +AKRA +L QSTHLYGRRLVLEWA D++E++R +T F +
Sbjct: 793 FVEYNTVQDAKRAFNSLSQSTHLYGRRLVLEWAAVDDDIENLRIKTAEQFNAGL 846
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 174/414 (42%), Positives = 247/414 (59%), Gaps = 41/414 (9%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+E+L F E+G VTDVQLKYT EGKFR+FAFIG+ + + A+ A N T++ S+I
Sbjct: 13 ITKEKLHQIFSEQGVVTDVQLKYTKEGKFRKFAFIGFQKPEYAEKAKAALNKTFINMSKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQK-----LHNIAPKQDLK---PEHTKDSKPG-- 138
+VE C+ LGD KP+ WSKYAP++ A +K +++ K+ LK E KD +
Sbjct: 73 QVETCAELGDPNKPRPWSKYAPENVAKKKKKQTQINHNESKKKLKMNEKEKIKDKEVKEL 132
Query: 139 -KKSKNDPTFSDFLQLHGKDVS-----KLLPLSNKDGEEKEEENEDESNNQ-----IAHA 187
K +ND FS+F+++H D+S KL + + + ENED NN+ +A+
Sbjct: 133 LKNHENDDLFSEFMKIHVPDLSINSDKKLENVEEEIKNTNKNENEDSENNKEETNVLANQ 192
Query: 188 DISDMEYLKLKTKS----KDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKA 243
DI D EY+KLKT K + S + K ++ + TI ++ LP +KK +K
Sbjct: 193 DIPDSEYIKLKTGQNILIKTESKSSVKLKKNGKEALNIELF-TIKLRGLPLEIKKSQIKE 251
Query: 244 YFKPLPLASVRTTFL--GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYS 301
+ KP S+R G + GFK EK +AL KNKSF GK++ + + KDN A+
Sbjct: 252 FLKPNKPFSIRKALRMRGTVFCGFKTEKEMKQALRKNKSFLGGKRIYVSEVRKDNMAEV- 310
Query: 302 GAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYG 361
N K K W+++ + ++ +E +AESGRIF+RNL YTVTE++L ++FEKYG
Sbjct: 311 ------------NEKEKKWEAENERLKKSETVAESGRIFIRNLPYTVTENELKEVFEKYG 358
Query: 362 PLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKP 415
P+ E ILPID T K KGF +VT+L+PEHA +AY LDGT+F GRMLHL+P P
Sbjct: 359 PVIEFILPIDSFTRKPKGFGIVTYLIPEHACKAYNELDGTIFSGRMLHLLPALP 412
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 133/332 (40%), Gaps = 49/332 (14%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS-VRTTFLGMAYIGFKDEKNCNKALNK 277
V R I+VKNLP G +++ F+ L S V G+A + E + + +
Sbjct: 511 VSPRSNTVILVKNLPFGTTSEEISEKFRKFGLLSRVVVPPSGVAALVEFAEPSEARIAFR 570
Query: 278 NKSFWKGKQLNIY-----------------KYSKDNSAKYSGAADDNNNASMENIKAKHW 320
S+ K K + +Y K K + N N S EN K
Sbjct: 571 RLSYSKFKHVPLYLEWAPEKVFSTEAKPVEKIEKTCNENLESEKSTNQNQSAENETQKTT 630
Query: 321 KSQEDSVQFAEDIAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK--- 376
+ E+ + + E G IFV+NL++ E L K FE G + V + K+ +
Sbjct: 631 GTIEE-----QRVPEEGTVIFVKNLNFATNESSLRKHFEACGTVLSVTIARKKDPKEPGK 685
Query: 377 --TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERK 434
+ G+ V F + E A +A + L T + L + N + +
Sbjct: 686 SLSMGYGFVEFSLKEEADKALKTLQFTNLDDHKIELKRSNRTTSVANTNSR--------- 736
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG-------L 487
+ + + + SK ILV+N+P++ ++ LF+ FG++ + +P +
Sbjct: 737 -NTYKKCEKPSSK--ILVRNVPFQATKREIGDLFKVFGEIKAIRLPKKLVGSGSHRGFCF 793
Query: 488 VEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
VE+ AK AFNSL+ T L LEWA
Sbjct: 794 VEYNTVQDAKRAFNSLSQSTHLYGRRLVLEWA 825
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 133/345 (38%), Gaps = 82/345 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+NL + T +++++ F K+G L+ V++P + ALV F P A A++ L
Sbjct: 519 ILVKNLPFGTTSEEISEKFRKFGLLSRVVVP------PSGVAALVEFAEPSEARIAFRRL 572
Query: 399 DGTVFLGRMLHL--IPGKPKENEGNVDGKVHCCISE----RKLDAFNQVVEARSKR---- 448
+ F L+L P K E K+ +E K NQ E +++
Sbjct: 573 SYSKFKHVPLYLEWAPEKVFSTEAKPVEKIEKTCNENLESEKSTNQNQSAENETQKTTGT 632
Query: 449 -----------IILVKNLPYRTLPTDLKALFEPFGDLGRVLV--------PPYGIT---G 486
+I VKNL + T + L+ FE G + V + P ++ G
Sbjct: 633 IEEQRVPEEGTVIFVKNLNFATNESSLRKHFEACGTVLSVTIARKKDPKEPGKSLSMGYG 692
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGE 546
VEF K +A A +L +T + + L+ +
Sbjct: 693 FVEFSLKEEADKALKTLQFTNLDDHKIELKRS---------------------------- 724
Query: 547 EEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGP 606
+ + A +++ + E +P + + ++N+ F +T+ I FK G
Sbjct: 725 -NRTTSVANTNSRNTYKKCE-----------KPSSKILVRNVPFQATKREIGDLFKVFGE 772
Query: 607 IASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
I ++ + + K G G+ FV++ T + +A L S+
Sbjct: 773 IKAIRLPK----KLVGSGSHRGFCFVEYNTVQDAKRAFNSLSQST 813
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 21/162 (12%)
Query: 376 KTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKL 435
+ +G F + QA + FLG + K+N V+ K E+K
Sbjct: 266 RMRGTVFCGFKTEKEMKQALRK--NKSFLGGKRIYVSEVRKDNMAEVNEK------EKKW 317
Query: 436 DAFNQVVE-----ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----- 485
+A N+ ++ A S RI ++NLPY +LK +FE +G + ++P T
Sbjct: 318 EAENERLKKSETVAESGRI-FIRNLPYTVTENELKEVFEKYGPVIEFILPIDSFTRKPKG 376
Query: 486 -GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA-PEGVFAE 525
G+V +L A A+N L T F L+L A P F+E
Sbjct: 377 FGIVTYLIPEHACKAYNELDGTIFSGRMLHLLPALPNNEFSE 418
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 32/163 (19%)
Query: 618 PKSPGQFLSM-GYGFVQFYTRESLNQALK----------VLQNSSLDEHQIELKRSNRNL 666
P S + L M G F F T + + QAL+ + + ++ E+ +
Sbjct: 258 PFSIRKALRMRGTVFCGFKTEKEMKQALRKNKSFLGGKRIYVSEVRKDNMAEVNEKEKKW 317
Query: 667 ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGEL--------KFVRLP 718
E+E +K KS VA+ +I +RN+P+ ++E++E+F+ +G + F R P
Sbjct: 318 EAENERLK-KSETVAE--SGRIFIRNLPYTVTENELKEVFEKYGPVIEFILPIDSFTRKP 374
Query: 719 KKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
K GFG V ++ A +A L T GR L L
Sbjct: 375 K---------GFGIVTYLIPEHACKAYNEL-DGTIFSGRMLHL 407
>gi|350407885|ref|XP_003488228.1| PREDICTED: probable RNA-binding protein 19-like [Bombus impatiens]
Length = 900
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 184/356 (51%), Positives = 241/356 (67%), Gaps = 20/356 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAFNQ RSK +ILVKNLP + +++ LF G+LGR ++PP GIT LVEFL+ +
Sbjct: 530 LDAFNQPPNKRSKTVILVKNLPAASPAQEIRQLFARHGELGRFVMPPSGITALVEFLEPS 589
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAYTK+K +PLYLEWAP+ F K K E E K+N
Sbjct: 590 EARKAFTQLAYTKYKHLPLYLEWAPDNSFTTPPPMGKNKATEVGANE--------KQNIK 641
Query: 555 EEDNQQGVPEVEENVEEDEE---------REPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
E D Q E E++ + EPE +TTL++KN+NF +TE+ ++ +F KCG
Sbjct: 642 EVDKQ--AEEFSESINDTNNANKEESEDEDEPEQETTLFVKNINFTTTEEQLKTYFGKCG 699
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRN 665
+ V++A KKDPK+PG LSMGYGFV++ + ++ALKVLQ + L+ +ELKRS R
Sbjct: 700 ALHYVSIATKKDPKNPGAKLSMGYGFVRYKRKVDADRALKVLQMTVLEGKTLELKRSERT 759
Query: 666 LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 725
L ++ +VK K+S V QTG+KIL+RN+PFQA EV ELFKAFGELK VRLPKK+VG
Sbjct: 760 LITDLKSVK-KTSTVTAQTGTKILIRNVPFQATVEEVTELFKAFGELKAVRLPKKLVGVE 818
Query: 726 LHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
HRGF FVE+ TK+EAK+A KALCQSTHLYGRRLVLEWA+ + VE++RKRT ++F
Sbjct: 819 KHRGFAFVEYYTKSEAKKAFKALCQSTHLYGRRLVLEWAQTEEGVEEVRKRTAKHF 874
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 260/445 (58%), Gaps = 73/445 (16%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT +LK F EKG +TDVQLKYT +GKFRRFAF+G+ E+QA A +YF+ T + + +I
Sbjct: 13 ITDTKLKELFSEKGLITDVQLKYTKDGKFRRFAFVGFKTEEQAIAVKEYFDQTCIDTCKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKS------- 141
+E+C++LGD++KP++WSKYAPDSS K++N E T+++ K++
Sbjct: 73 SIEQCASLGDSSKPRAWSKYAPDSSR-GKINNTDS-----TEITENTALNKRTVDKEKGK 126
Query: 142 ----------------KNDPTFSDFLQLHGKD---------VSKLLPLSNKDGEEKEEEN 176
K+DP F +FL+ H D ++ + + D E + ++
Sbjct: 127 KEEGIKKEIREALEKHKDDPLFMEFLESHTTDKAIWKNDTILAAIQTKEHSDNEINDSKS 186
Query: 177 EDESNN-------------------QIAHADISDMEYLK-LKTKSKDTAPSDPSVPPVSK 216
D++N+ +IA+ ISD+EY++ LK K K+ + SK
Sbjct: 187 SDQNNDKEYSKEEEDEEEEGKEKEQKIANKVISDLEYMESLKGKEKNI--ENRISNDKSK 244
Query: 217 APVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTT--FLGMAYIGFKDEKNCNKA 274
+ + T+ ++ L KKK++K +F PL S+R + G+AY+GFK E++ KA
Sbjct: 245 SKHGSIKLFTVKLRGLAYNHKKKNIKQFFHPLKAKSIRISPKIKGIAYVGFKTEQHLRKA 304
Query: 275 LNKNKSFWKGKQLNIYKY-SKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI 333
L KNKSF G+Q+ + +Y +K+ ++ +G DDN WK Q ++++ + I
Sbjct: 305 LLKNKSFLDGRQIFVMQYEAKEYNSDEAGNKDDN----------VRWKKQLEALKSEDSI 354
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
AESGR+F+RNLSYT+TED++ +LFEKYGP++EV LPID+ T K KGF +TFLM EHA +
Sbjct: 355 AESGRMFIRNLSYTITEDNIRQLFEKYGPISEVNLPIDRTTRKPKGFGTITFLMAEHAVK 414
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKEN 418
AY LDG++ GRMLH++P K K +
Sbjct: 415 AYSELDGSILDGRMLHVLPAKAKSD 439
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 149/351 (42%), Gaps = 69/351 (19%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFK--------PLPLASVRTTFLGMAYIGFKDEK 269
P +KR I+VKNLPA ++++ F +P + + A + F +
Sbjct: 536 PPNKRSKTVILVKNLPAASPAQEIRQLFARHGELGRFVMPPSGI------TALVEFLEPS 589
Query: 270 NCNKALNKNKSFWKGKQLNIY-KYSKDNSAKYSGAADDNNNASM-----ENIKAKHWKSQ 323
KA + ++ K K L +Y +++ DNS N + +NIK +++
Sbjct: 590 EARKAFTQ-LAYTKYKHLPLYLEWAPDNSFTTPPPMGKNKATEVGANEKQNIKEVDKQAE 648
Query: 324 EDSVQFAEDIAESGR-----------------IFVRNLSYTVTEDDLTKLFEKYGPLAEV 366
E F+E I ++ +FV+N+++T TE+ L F K G L V
Sbjct: 649 E----FSESINDTNNANKEESEDEDEPEQETTLFVKNINFTTTEEQLKTYFGKCGALHYV 704
Query: 367 ILPIDKETDK-----TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGN 421
+ K+ + G+ V + A +A + L TV G+ L L K +E
Sbjct: 705 SIATKKDPKNPGAKLSMGYGFVRYKRKVDADRALKVLQMTVLEGKTLEL-----KRSE-- 757
Query: 422 VDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP 481
I++ K V A++ IL++N+P++ ++ LF+ FG+L V +P
Sbjct: 758 -----RTLITDLKSVKKTSTVTAQTGTKILIRNVPFQATVEEVTELFKAFGELKAVRLPK 812
Query: 482 --YGIT-----GLVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWAP--EGV 522
G+ VE+ K++AK AF +L T L LEWA EGV
Sbjct: 813 KLVGVEKHRGFAFVEYYTKSEAKKAFKALCQSTHLYGRRLVLEWAQTEEGV 863
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++I+NL++ TED+IR+ F+K GPI+ V + + + P G+G + F E +
Sbjct: 360 MFIRNLSYTITEDNIRQLFEKYGPISEVNLPIDRTTRKP-----KGFGTITFLMAEHAVK 414
Query: 643 ALKVLQNSSLDEHQIEL 659
A L S LD + +
Sbjct: 415 AYSELDGSILDGRMLHV 431
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T+ ++ L +N + +I++ F P+ + ++ + PK G +V F T + L
Sbjct: 254 TVKLRGLAYNHKKKNIKQFFH---PLKAKSI--RISPKIKG------IAYVGFKTEQHLR 302
Query: 642 QALKVLQNSS-LDEHQI-------------ELKRSNRNLESEATTVKRKSSNVAKQTGSK 687
+AL L+N S LD QI E + N+ + KS + ++G +
Sbjct: 303 KAL--LKNKSFLDGRQIFVMQYEAKEYNSDEAGNKDDNVRWKKQLEALKSEDSIAESG-R 359
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
+ +RN+ + + + +LF+ +G + V LP + +GFG + F+ A +A
Sbjct: 360 MFIRNLSYTITEDNIRQLFEKYGPISEVNLPIDRT-TRKPKGFGTITFLMAEHAVKAYSE 418
Query: 748 LCQSTHLYGRRL-VLEWAEEADNVEDIRKRTNRY 780
L S L GR L VL ++D +E++ +R Y
Sbjct: 419 LDGSI-LDGRMLHVLPAKAKSDPMEELDERGLTY 451
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 30/209 (14%)
Query: 312 MENIKAKHWKSQEDSVQFAEDIAESGRIFV-----RNLSYTVTEDDLTKLFEKYGPLAEV 366
ME++K K K+ E+ + + ++ G I + R L+Y + ++ + F PL
Sbjct: 224 MESLKGKE-KNIENRISNDKSKSKHGSIKLFTVKLRGLAYNHKKKNIKQFFH---PLKAK 279
Query: 367 ILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFL-GRMLHLIPGKPKE----NEGN 421
+ I + K KG A V F +H +A L FL GR + ++ + KE GN
Sbjct: 280 SIRI---SPKIKGIAYVGFKTEQHLRKAL--LKNKSFLDGRQIFVMQYEAKEYNSDEAGN 334
Query: 422 VDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP- 480
D V L + + + E+ + ++NL Y +++ LFE +G + V +P
Sbjct: 335 KDDNVRWKKQLEALKSEDSIAESGR---MFIRNLSYTITEDNIRQLFEKYGPISEVNLPI 391
Query: 481 ------PYGITGLVEFLQKNQAKAAFNSL 503
P G G + FL A A++ L
Sbjct: 392 DRTTRKPKGF-GTITFLMAEHAVKAYSEL 419
>gi|340721943|ref|XP_003399372.1| PREDICTED: probable RNA-binding protein 19-like [Bombus terrestris]
Length = 901
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/356 (51%), Positives = 240/356 (67%), Gaps = 20/356 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAFNQ RSK +ILVKNLP + +++ LF G+LGR ++PP GIT LVEFL+ +
Sbjct: 531 LDAFNQPPNKRSKTVILVKNLPAASPAQEIRQLFARHGELGRFVMPPSGITALVEFLEPS 590
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAYTK+K +PLYLEWAP+ F K K E E K N
Sbjct: 591 EARKAFTQLAYTKYKHLPLYLEWAPDNSFTTPPPAGKNKATEVGTNE--------KNNIK 642
Query: 555 EEDNQQGVPEVEENVEEDEE---------REPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
E D Q E E++ + + EPE +TTL++KN+NF +TE+ ++ +F KCG
Sbjct: 643 EVDKQ--AEEFSESINDTNKANKEESEDEDEPEQETTLFVKNINFTTTEEQLKTYFGKCG 700
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRN 665
+ V++A KKDPK+PG LSMGYGFV++ + ++ALKVLQ + L+ +ELKRS R
Sbjct: 701 ALHYVSIATKKDPKNPGAKLSMGYGFVRYKRKVDADRALKVLQMTVLEGKTLELKRSERT 760
Query: 666 LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 725
L ++ + K K+S V QTG+KIL+RN+PFQA EV ELFKAFGELK VRLPKK+VG
Sbjct: 761 LTTDLKSAK-KTSKVTAQTGTKILIRNVPFQATVEEVTELFKAFGELKAVRLPKKLVGVE 819
Query: 726 LHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
HRGF FVE+ TK+EAK+A KALCQSTHLYGRRLVLEWA+ + VE++RKRT ++F
Sbjct: 820 KHRGFAFVEYYTKSEAKKAFKALCQSTHLYGRRLVLEWAQTEEGVEEVRKRTAKHF 875
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 251/441 (56%), Gaps = 64/441 (14%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T +LK F EKG +TDVQLKYT +GKFRRFAFIG E+QA A +YF+ T + + +I
Sbjct: 13 VTDTKLKELFSEKGLITDVQLKYTKDGKFRRFAFIGLKTEEQATAVKEYFDQTCIDTCKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHN-----IAPKQDLKPEHTKDSKPGKKS-- 141
+E+C++LGD++KP++WSKYAPDSS K+HN I + E +K GKK
Sbjct: 73 SIEQCASLGDSSKPRAWSKYAPDSSK-GKIHNKDSTEITENIAIVDEEKDRNKKGKKEEG 131
Query: 142 ------------KNDPTFSDFLQLHGKDV------SKLLPLSNK---DGEEKEEENEDES 180
K+DP F +FL+ H D + L + K D E + ++ D+
Sbjct: 132 VQKEIREALEKHKDDPLFMEFLESHATDKAIWKNDTILATIQTKELSDNEVNDIKSSDQY 191
Query: 181 NN-------------------QIAHADISDMEYLK-LKTKSKDTAPSDPSVPPVSKAPVH 220
N+ +IA ISD+EY++ LK K K+ PS SK
Sbjct: 192 NDKEDSKEEDDEEEERKEKEPKIADKVISDLEYMESLKRKEKNIEERIPSDKSKSKHGSI 251
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTT--FLGMAYIGFKDEKNCNKALNKN 278
K T+ ++ L KKK +F PL S+R + G+AY+GFK E++ KAL K
Sbjct: 252 K--LFTVKLRGLAYNHKKKISNNFFHPLKAKSIRISPKIKGIAYVGFKTEQHLRKALQKT 309
Query: 279 KSFWKGKQLNIYKY-SKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG 337
K F G+Q+ + +Y +K+ ++ + DDN WK Q ++++ E IAESG
Sbjct: 310 KFFLDGRQIFVMQYEAKEYNSDEAENKDDN----------VRWKKQLEALRSEESIAESG 359
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+F+RNLSYT+TED++ +LFEKYGPL+EV LPID+ T K KGF V FLMPEHA +AY
Sbjct: 360 RMFIRNLSYTITEDNIRQLFEKYGPLSEVNLPIDRTTRKPKGFGTVAFLMPEHAVKAYSE 419
Query: 398 LDGTVFLGRMLHLIPGKPKEN 418
LDG++ GRMLH++P K K +
Sbjct: 420 LDGSILDGRMLHVLPAKAKSD 440
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 149/351 (42%), Gaps = 69/351 (19%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFK--------PLPLASVRTTFLGMAYIGFKDEK 269
P +KR I+VKNLPA ++++ F +P + + A + F +
Sbjct: 537 PPNKRSKTVILVKNLPAASPAQEIRQLFARHGELGRFVMPPSGI------TALVEFLEPS 590
Query: 270 NCNKALNKNKSFWKGKQLNIY-KYSKDNSAKYSGAADDNNNASM-----ENIKAKHWKSQ 323
KA + ++ K K L +Y +++ DNS A N + NIK +++
Sbjct: 591 EARKAFTQ-LAYTKYKHLPLYLEWAPDNSFTTPPPAGKNKATEVGTNEKNNIKEVDKQAE 649
Query: 324 EDSVQFAEDIAESGR-----------------IFVRNLSYTVTEDDLTKLFEKYGPLAEV 366
E F+E I ++ + +FV+N+++T TE+ L F K G L V
Sbjct: 650 E----FSESINDTNKANKEESEDEDEPEQETTLFVKNINFTTTEEQLKTYFGKCGALHYV 705
Query: 367 ILPIDKETDK-----TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGN 421
+ K+ + G+ V + A +A + L TV G+ L L K +E
Sbjct: 706 SIATKKDPKNPGAKLSMGYGFVRYKRKVDADRALKVLQMTVLEGKTLEL-----KRSERT 760
Query: 422 VDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP 481
+ + K V A++ IL++N+P++ ++ LF+ FG+L V +P
Sbjct: 761 LTTDLKSAKKTSK-------VTAQTGTKILIRNVPFQATVEEVTELFKAFGELKAVRLPK 813
Query: 482 --YGIT-----GLVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWAP--EGV 522
G+ VE+ K++AK AF +L T L LEWA EGV
Sbjct: 814 KLVGVEKHRGFAFVEYYTKSEAKKAFKALCQSTHLYGRRLVLEWAQTEEGV 864
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++I+NL++ TED+IR+ F+K GP++ V + + + P G+G V F E +
Sbjct: 361 MFIRNLSYTITEDNIRQLFEKYGPLSEVNLPIDRTTRKP-----KGFGTVAFLMPEHAVK 415
Query: 643 ALKVLQNSSLDEHQIEL 659
A L S LD + +
Sbjct: 416 AYSELDGSILDGRMLHV 432
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 628 GYGFVQFYTRESLNQALK------------VLQNSSLDEHQIELKRSNRNLESEATTVKR 675
G +V F T + L +AL+ V+Q + + + E + + N+ +
Sbjct: 290 GIAYVGFKTEQHLRKALQKTKFFLDGRQIFVMQYEAKEYNSDEAENKDDNVRWKKQLEAL 349
Query: 676 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
+S ++G ++ +RN+ + + + +LF+ +G L V LP + +GFG V F
Sbjct: 350 RSEESIAESG-RMFIRNLSYTITEDNIRQLFEKYGPLSEVNLPIDRT-TRKPKGFGTVAF 407
Query: 736 ITKNEAKRAMKALCQSTHLYGRRL-VLEWAEEADNVEDIRKRTNRY 780
+ A +A L S L GR L VL ++D +E++ K+ Y
Sbjct: 408 LMPEHAVKAYSELDGSI-LDGRMLHVLPAKAKSDPMEELDKKGLTY 452
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 12/137 (8%)
Query: 376 KTKGFALVTFLMPEHATQAYQHLDGTVFL-GRMLHLIPGKPKE-NEGNVDGKVHCCISER 433
K KG A V F +H +A Q FL GR + ++ + KE N + K ++
Sbjct: 287 KIKGIAYVGFKTEQHLRKALQKTK--FFLDGRQIFVMQYEAKEYNSDEAENKDDNVRWKK 344
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITG 486
+L+A + ++NL Y +++ LFE +G L V +P P G G
Sbjct: 345 QLEALRSEESIAESGRMFIRNLSYTITEDNIRQLFEKYGPLSEVNLPIDRTTRKPKGF-G 403
Query: 487 LVEFLQKNQAKAAFNSL 503
V FL A A++ L
Sbjct: 404 TVAFLMPEHAVKAYSEL 420
>gi|327282636|ref|XP_003226048.1| PREDICTED: probable RNA-binding protein 19-like isoform 2 [Anolis
carolinensis]
Length = 938
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 237/347 (68%), Gaps = 10/347 (2%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP T T L+ +F +G LGRVL+P G+T +VEFL+
Sbjct: 571 LDSFSQAASERSKTVILVKNLPAGTEATALEEVFGAYGSLGRVLLPEGGVTAIVEFLEPT 630
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AK AF LAY+KF+ +PLYLEWAP GVF+ G K K E G + E E T
Sbjct: 631 EAKRAFTKLAYSKFRHIPLYLEWAPMGVFS-------GPGKRKPENPGVKKESEGPAETV 683
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ + ++G E E++ ++D++ E P TL++KNLNFN+TE++++ F K G + S TV+R
Sbjct: 684 QMETEKGQIEEEDDEDDDDDEESLPGCTLFVKNLNFNTTEETLKEVFTKAGAVKSCTVSR 743
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K+D G LSMG+GFV++ E +ALK LQ S+D HQ+E+K S R ++S T+
Sbjct: 744 KRD--KAGTLLSMGFGFVEYRKPEHAQKALKQLQGCSVDGHQLEVKISERAIKSPVTST- 800
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
RK+ + KQ SKILVRNIPFQA E+ ELF FGELK VRLPKKMVG+G HRGFGFV+
Sbjct: 801 RKTQRLKKQKSSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFGFVD 860
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
F+TK +AK+A LC STHLYGRRLVLEWA+ + VE +R++T +F
Sbjct: 861 FLTKQDAKQAFNTLCHSTHLYGRRLVLEWADTEETVEALRRKTAEHF 907
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 120/202 (59%), Gaps = 17/202 (8%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKN 278
+T+ ++ P V +++++ + PL ++R G ++ F +E+ KAL +N
Sbjct: 292 YTVKLRGAPFNVTEQNVREFLVPLRPVAIRIVRNAHGNKTGYVFVDFNNEEEVQKALKRN 351
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
+ G+ + ++ +++S K ++ D A+ W+ + + ED+++SGR
Sbjct: 352 HEYMGGRYIELF--YEEHSKKTKPSSKD---------PARTWQRTKKVDEEDEDLSDSGR 400
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVRNL YT TE+DL KLF KYGPL+E+ PID T K KGFA VT++ PEHA +A+ +
Sbjct: 401 LFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPIDGLTKKPKGFAFVTYMFPEHAVKAFAEV 460
Query: 399 DGTVFLGRMLHLIPGKPKENEG 420
DG VF GRMLH++P K++EG
Sbjct: 461 DGQVFQGRMLHVLPSTIKKDEG 482
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 9/156 (5%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++ + F GT+TD LK+T +GKFR+F FIG+ ED A+AAL +FN +++ ++R+
Sbjct: 13 MKEDRFRGLFAAFGTLTDCALKFTKDGKFRKFGFIGFKSEDDAKAALTHFNKSFIDTARV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG--------KK 140
VE C + GD KP++WSK++ A +K+ + K E +D K KK
Sbjct: 73 SVEFCKSFGDPQKPRAWSKHSQKPPATEKVPEKSAKSSGHAEFKQDEKKKKKNQPEDFKK 132
Query: 141 SKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEEN 176
+ + F DFL+ H K S+ SN E+ ++N
Sbjct: 133 LEGEEAFQDFLEAH-KKRSQATTWSNDTKAEEAKKN 167
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 27/193 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+FV+NL++ TE+ L ++F K G + + ++ DK + GF V + PEHA +
Sbjct: 712 LFVKNLNFNTTEETLKEVFTKAGAVKSCT--VSRKRDKAGTLLSMGFGFVEYRKPEHAQK 769
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + L G G L + K +E + V S RK Q ++ + ILV+
Sbjct: 770 ALKQLQGCSVDGHQLEV-----KISERAIKSPV---TSTRK----TQRLKKQKSSKILVR 817
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAY- 505
N+P++ +++ LF FG+L V +P + G V+FL K AK AFN+L +
Sbjct: 818 NIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFGFVDFLTKQDAKQAFNTLCHS 877
Query: 506 TKFKEVPLYLEWA 518
T L LEWA
Sbjct: 878 THLYGRRLVLEWA 890
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 27/201 (13%)
Query: 559 QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
+ G E E +++ EP T+ ++ FN TE ++R P+A V
Sbjct: 270 ESGAGEKMEGLKKGGANEPTTSYTVKLRGAPFNVTEQNVREFLVPLRPVAIRIVRNAHGN 329
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL------KRSNRNLESEATT 672
K+ GY FV F E + +ALK + + IEL K++ + + A T
Sbjct: 330 KT-------GYVFVDFNNEEEVQKALK-RNHEYMGGRYIELFYEEHSKKTKPSSKDPART 381
Query: 673 VKRKSSNVAKQT-----GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 727
+R + V ++ ++ VRN+P+ + + ++E+LF +G L + P GL
Sbjct: 382 WQR-TKKVDEEDEDLSDSGRLFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPI----DGLT 436
Query: 728 ---RGFGFVEFITKNEAKRAM 745
+GF FV ++ A +A
Sbjct: 437 KKPKGFAFVTYMFPEHAVKAF 457
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDK-ETDKTKGFALVTFLMPEHATQA 394
S +I VRN+ + T ++ +LF +G L V LP T +GF V FL + A QA
Sbjct: 811 SSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFGFVDFLTKQDAKQA 870
Query: 395 YQHLDGTVFL-GRMLHL 410
+ L + L GR L L
Sbjct: 871 FNTLCHSTHLYGRRLVL 887
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ LF AFG L L K G R FGF+ F ++++AK A+
Sbjct: 2 SRLIVKNLPSGMKEDRFRGLFAAFGTLTDCAL--KFTKDGKFRKFGFIGFKSEDDAKAAL 59
Query: 746 KALCQS 751
+S
Sbjct: 60 THFNKS 65
>gi|190337757|gb|AAI63877.1| RNA binding motif protein 19 [Danio rerio]
Length = 926
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/351 (50%), Positives = 239/351 (68%), Gaps = 21/351 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP DL+ALF P G LGRVL+PP G+T +VEFL+
Sbjct: 571 LDSFSQASGERSKCVILVKNLPSGVQVADLEALFSPHGSLGRVLLPPSGLTAIVEFLEPT 630
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE-AKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+AK AF LAYTKF+ VPLYLEWAP VF + + + + KEK+ + + + E++E
Sbjct: 631 EAKRAFMKLAYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKNDSVQNEEEEEE 690
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
EED+Q P +TL+IKNLNF ++E+++++ F KCG + S T++
Sbjct: 691 EEEDDQ-----------------ILPGSTLFIKNLNFITSEETLQKTFSKCGVVKSCTIS 733
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
+K+D G+ LSMGYGFVQ+ T E+ +A++ LQ+ ++DEHQ+E+K S R ++S
Sbjct: 734 KKRD--KAGKLLSMGYGFVQYKTPEAAQKAMRQLQHCTVDEHQLEVKISEREVKSGVAQA 791
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
KRK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK +G G HRGFGF+
Sbjct: 792 KRKKQTARKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIG-GSHRGFGFI 850
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTA 784
+F+TK +AK+A ALC STHLYGRRLVLEWA+ + V+D+R++T ++F A
Sbjct: 851 DFLTKQDAKKAFSALCHSTHLYGRRLVLEWADAEETVDDLRRKTAQHFHDA 901
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 140/281 (49%), Gaps = 19/281 (6%)
Query: 147 FSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAP 206
SD L K V K L KD E ++ ++ + S +++ +S +
Sbjct: 215 LSDMDYLRSKMVEKSDMLDEKDDESSASAADENEEDEGEEEEESTVQHTDSAYESGEKTS 274
Query: 207 SDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTT------FLGM 260
S S P + T+ ++ P VK++ +K + PL ++R G
Sbjct: 275 SQKSTRPA----IEPTTEFTVKLRGAPFNVKEQQVKEFMMPLKPVAIRFAKNSDGRNSGY 330
Query: 261 AYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHW 320
Y+ + E +AL +K + G+ + +++ + + + S + ME K++
Sbjct: 331 VYVDLRSEAEVERALRLDKDYMGGRYIEVFRANNFKNDRRSA-----KRSEME----KNF 381
Query: 321 KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGF 380
+ + ED+AESGR+F+RN+ YT TE+DL ++F K+GPL+EV+ PID T K KGF
Sbjct: 382 VRELKDDEEEEDVAESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGF 441
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGN 421
A VT+++PE+A A LDG F GR+LH++ + K+ + +
Sbjct: 442 AFVTYMIPENAVSALAQLDGHTFQGRVLHVMASRLKKEKAD 482
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 56/80 (70%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++ + F + GT+TD LK+T +GKFR+F F+G+ E+ AQ AL +FN ++V +SR+
Sbjct: 13 MKEDRFRKMFADFGTLTDCALKFTKDGKFRKFGFVGFKTEEDAQKALKHFNKSFVDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKY 108
VE C++ GD K + WSK+
Sbjct: 73 TVELCTDFGDPNKARPWSKH 92
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 141/320 (44%), Gaps = 42/320 (13%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKALNKNK 279
R I+VKNLP+GV+ DL+A F P L V G+ A + F + +A K
Sbjct: 581 RSKCVILVKNLPSGVQVADLEALFSPHGSLGRVLLPPSGLTAIVEFLEPTEAKRAFMK-L 639
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQ---------FA 330
++ K + + +Y + + +A + E K+ DSVQ
Sbjct: 640 AYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKN-----DSVQNEEEEEEEEED 694
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTF 385
+ I +F++NL++ +E+ L K F K G + I K+ DK + G+ V +
Sbjct: 695 DQILPGSTLFIKNLNFITSEETLQKTFSKCGVVKSCT--ISKKRDKAGKLLSMGYGFVQY 752
Query: 386 LMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
PE A +A + L L + K +E V V ++RK Q +
Sbjct: 753 KTPEAAQKAMRQLQHCTVDEHQLEV-----KISEREVKSGV--AQAKRK----KQTARKQ 801
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAA 499
+ ILV+N+P++ +L+ LF FG+L V +P GI G ++FL K AK A
Sbjct: 802 TTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKA 861
Query: 500 FNSLAY-TKFKEVPLYLEWA 518
F++L + T L LEWA
Sbjct: 862 FSALCHSTHLYGRRLVLEWA 881
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP + T+ ++ FN E ++ P+A + A+ D ++ G Y +V
Sbjct: 284 EPTTEFTVKLRGAPFNVKEQQVKEFMMPLKPVA-IRFAKNSDGRNSG------YVYVDLR 336
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS--SNVAKQT--------- 684
+ + +AL+ L + IE+ R+N N +++ + KR N ++
Sbjct: 337 SEAEVERALR-LDKDYMGGRYIEVFRAN-NFKNDRRSAKRSEMEKNFVRELKDDEEEEDV 394
Query: 685 --GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
++ +RN+P+ + +++E+F G L V P + + +GF FV ++ A
Sbjct: 395 AESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSL-TKKPKGFAFVTYMIPENAV 453
Query: 743 RAMKALCQST------HLYGRRLVLEWAEEA 767
A+ L T H+ RL E A++
Sbjct: 454 SALAQLDGHTFQGRVLHVMASRLKKEKADQG 484
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ ++F FG L L K G R FGFV F T+ +A++A+
Sbjct: 2 SRLIVKNLPNGMKEDRFRKMFADFGTLTDCAL--KFTKDGKFRKFGFVGFKTEEDAQKAL 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|49619013|gb|AAT68091.1| KIAA0682-like [Danio rerio]
Length = 927
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 176/351 (50%), Positives = 239/351 (68%), Gaps = 21/351 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP DL+ALF P G LGRVL+PP G+T +VEFL+
Sbjct: 572 LDSFSQASGERSKCVILVKNLPSGVQVADLEALFSPHGSLGRVLLPPSGLTAIVEFLEPT 631
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE-AKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+AK AF LAYTKF+ VPLYLEWAP VF + + + + KEK+ + + + E++E
Sbjct: 632 EAKRAFMKLAYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKNDSVQNEEEEEE 691
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
EED+Q P +TL+IKNLNF ++E+++++ F KCG + S T++
Sbjct: 692 EEEDDQ-----------------ILPGSTLFIKNLNFITSEETLQKTFSKCGVVKSCTIS 734
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
+K+D G+ LSMGYGFVQ+ T E+ +A++ LQ+ ++DEHQ+E+K S R ++S
Sbjct: 735 KKRD--KAGKLLSMGYGFVQYKTPEAAQKAMRQLQHCTVDEHQLEVKISEREVKSGVAQA 792
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
KRK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK +G G HRGFGF+
Sbjct: 793 KRKKQTARKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIG-GSHRGFGFI 851
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTA 784
+F+TK +AK+A ALC STHLYGRRLVLEWA+ + V+D+R++T ++F A
Sbjct: 852 DFLTKQDAKKAFSALCHSTHLYGRRLVLEWADAEETVDDLRRKTAQHFHDA 902
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 114/202 (56%), Gaps = 15/202 (7%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRTT------FLGMAYIGFKDEKNCNKALNKNK 279
T+ ++ P VK++ +K + PL ++R G Y+ + E +AL +K
Sbjct: 291 TVKLRGAPFNVKEQQVKEFMMPLKPVAIRFAKNSDGRNSGYVYVDLRSEAEVERALRLDK 350
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
+ G+ + +++ + + + S + ME K++ + + ED+AESGR+
Sbjct: 351 DYMGGRYIEVFRANNFKNDRRSA-----KRSEME----KNFVRELKDDEEEEDVAESGRL 401
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
F+RN+ YT TE+DL +LF K+GPL+EV+ PID T K KGFA VT+++PE+A A LD
Sbjct: 402 FIRNMPYTCTEEDLKELFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALAQLD 461
Query: 400 GTVFLGRMLHLIPGKPKENEGN 421
G F GR+LH++ + K+ + +
Sbjct: 462 GHTFQGRVLHVMASRLKKEKAD 483
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 58/86 (67%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++ + F + GT+TD LK+T +GKFR+F F+G+ E+ AQ AL +FN ++V +SR+
Sbjct: 13 MKEDRFRKMFADFGTLTDCALKFTKDGKFRKFGFVGFKTEEDAQKALKHFNKSFVDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSA 114
VE C++ GD K + WSK+ S+
Sbjct: 73 TVELCTDFGDPNKARPWSKHTRQPSS 98
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 141/320 (44%), Gaps = 42/320 (13%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKALNKNK 279
R I+VKNLP+GV+ DL+A F P L V G+ A + F + +A K
Sbjct: 582 RSKCVILVKNLPSGVQVADLEALFSPHGSLGRVLLPPSGLTAIVEFLEPTEAKRAFMK-L 640
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQ---------FA 330
++ K + + +Y + + +A + E K+ DSVQ
Sbjct: 641 AYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKN-----DSVQNEEEEEEEEED 695
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTF 385
+ I +F++NL++ +E+ L K F K G + I K+ DK + G+ V +
Sbjct: 696 DQILPGSTLFIKNLNFITSEETLQKTFSKCGVVKSCT--ISKKRDKAGKLLSMGYGFVQY 753
Query: 386 LMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
PE A +A + L L + K +E V V ++RK Q +
Sbjct: 754 KTPEAAQKAMRQLQHCTVDEHQLEV-----KISEREVKSGV--AQAKRK----KQTARKQ 802
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAA 499
+ ILV+N+P++ +L+ LF FG+L V +P GI G ++FL K AK A
Sbjct: 803 TTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKA 862
Query: 500 FNSLAY-TKFKEVPLYLEWA 518
F++L + T L LEWA
Sbjct: 863 FSALCHSTHLYGRRLVLEWA 882
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP + T+ ++ FN E ++ P+A + A+ D ++ G Y +V
Sbjct: 285 EPTTEFTVKLRGAPFNVKEQQVKEFMMPLKPVA-IRFAKNSDGRNSG------YVYVDLR 337
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS--SNVAKQT--------- 684
+ + +AL+ L + IE+ R+N N +++ + KR N ++
Sbjct: 338 SEAEVERALR-LDKDYMGGRYIEVFRAN-NFKNDRRSAKRSEMEKNFVRELKDDEEEEDV 395
Query: 685 --GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
++ +RN+P+ + +++ELF G L V P + + +GF FV ++ A
Sbjct: 396 AESGRLFIRNMPYTCTEEDLKELFSKHGPLSEVLFPIDSL-TKKPKGFAFVTYMIPENAV 454
Query: 743 RAMKALCQST------HLYGRRLVLEWAEEA 767
A+ L T H+ RL E A++
Sbjct: 455 SALAQLDGHTFQGRVLHVMASRLKKEKADQG 485
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ ++F FG L L K G R FGFV F T+ +A++A+
Sbjct: 2 SRLIVKNLPNGMKEDRFRKMFADFGTLTDCAL--KFTKDGKFRKFGFVGFKTEEDAQKAL 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|390354769|ref|XP_003728404.1| PREDICTED: probable RNA-binding protein 19-like [Strongylocentrotus
purpuratus]
Length = 384
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/347 (49%), Positives = 232/347 (66%), Gaps = 10/347 (2%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q ARSK + LVKNLP T P +L+ +F G LGRVL+PP G+T +VEFL+
Sbjct: 23 LDSFSQAAAARSKSVFLVKNLPASTTPEELREVFSQHGMLGRVLMPPAGVTSIVEFLEPT 82
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+AAF LAYTKFK VPLYLEWAP VF G + E+ E ++++
Sbjct: 83 EARAAFYQLAYTKFKHVPLYLEWAPMDVF--------GTSIKSLEKTPAVEETKEEKKEE 134
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
E+ ++ P+ E E D+E + + + L++KNLNF++ E +++ FKKCG I +VT+AR
Sbjct: 135 LEEVRKEEPQ--EESESDDEHQVQEGSVLFVKNLNFSTDESILKKAFKKCGSIRNVTIAR 192
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
KKD K+ G+ LSMGYGF++F E +ALK Q+ ++ H +ELK SNR+ +
Sbjct: 193 KKDTKNQGELLSMGYGFIEFEKPEWAQKALKEYQHVEVEGHNVELKISNRSTVQTQQSSS 252
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
RK KQ +KILVRNIPF+A E+ ELF FGE+K VRLPKKM G+G HRGFGFV+
Sbjct: 253 RKKQKAKKQMSTKILVRNIPFEASSREIRELFITFGEVKTVRLPKKMSGTGSHRGFGFVD 312
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
F++K +AKRA +LC S+HLYGRRLVLEWAE +VE +RK+T +F
Sbjct: 313 FLSKQDAKRAFDSLCHSSHLYGRRLVLEWAESEQSVEQLRKKTADHF 359
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 44/209 (21%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLM 387
+ E +FV+NL+++ E L K F+K G + V + K+T + G+ + F
Sbjct: 155 VQEGSVLFVKNLNFSTDESILKKAFKKCGSIRNVTIARKKDTKNQGELLSMGYGFIEFEK 214
Query: 388 PEHATQA---YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEA 444
PE A +A YQH+ E EG+ V IS R Q
Sbjct: 215 PEWAQKALKEYQHV------------------EVEGH---NVELKISNRSTVQTQQSSSR 253
Query: 445 RSKRI-------ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEF 490
+ ++ ILV+N+P+ +++ LF FG++ V +P + G V+F
Sbjct: 254 KKQKAKKQMSTKILVRNIPFEASSREIRELFITFGEVKTVRLPKKMSGTGSHRGFGFVDF 313
Query: 491 LQKNQAKAAFNSLAYTK-FKEVPLYLEWA 518
L K AK AF+SL ++ L LEWA
Sbjct: 314 LSKQDAKRAFDSLCHSSHLYGRRLVLEWA 342
>gi|327282634|ref|XP_003226047.1| PREDICTED: probable RNA-binding protein 19-like isoform 1 [Anolis
carolinensis]
Length = 945
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/347 (50%), Positives = 236/347 (68%), Gaps = 3/347 (0%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP T T L+ +F +G LGRVL+P G+T +VEFL+
Sbjct: 571 LDSFSQAASERSKTVILVKNLPAGTEATALEEVFGAYGSLGRVLLPEGGVTAIVEFLEPT 630
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AK AF LAY+KF+ +PLYLEWAP GVF+ ++ K E EG K +
Sbjct: 631 EAKRAFTKLAYSKFRHIPLYLEWAPMGVFSGPGKRKPENPGVKKESEGPAETGGSKVDEV 690
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ + ++G E E++ ++D++ E P TL++KNLNFN+TE++++ F K G + S TV+R
Sbjct: 691 QMETEKGQIEEEDDEDDDDDEESLPGCTLFVKNLNFNTTEETLKEVFTKAGAVKSCTVSR 750
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K+D G LSMG+GFV++ E +ALK LQ S+D HQ+E+K S R ++S T+
Sbjct: 751 KRD--KAGTLLSMGFGFVEYRKPEHAQKALKQLQGCSVDGHQLEVKISERAIKSPVTST- 807
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
RK+ + KQ SKILVRNIPFQA E+ ELF FGELK VRLPKKMVG+G HRGFGFV+
Sbjct: 808 RKTQRLKKQKSSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFGFVD 867
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
F+TK +AK+A LC STHLYGRRLVLEWA+ + VE +R++T +F
Sbjct: 868 FLTKQDAKQAFNTLCHSTHLYGRRLVLEWADTEETVEALRRKTAEHF 914
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 120/202 (59%), Gaps = 17/202 (8%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKN 278
+T+ ++ P V +++++ + PL ++R G ++ F +E+ KAL +N
Sbjct: 292 YTVKLRGAPFNVTEQNVREFLVPLRPVAIRIVRNAHGNKTGYVFVDFNNEEEVQKALKRN 351
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
+ G+ + ++ +++S K ++ D A+ W+ + + ED+++SGR
Sbjct: 352 HEYMGGRYIELF--YEEHSKKTKPSSKD---------PARTWQRTKKVDEEDEDLSDSGR 400
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVRNL YT TE+DL KLF KYGPL+E+ PID T K KGFA VT++ PEHA +A+ +
Sbjct: 401 LFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPIDGLTKKPKGFAFVTYMFPEHAVKAFAEV 460
Query: 399 DGTVFLGRMLHLIPGKPKENEG 420
DG VF GRMLH++P K++EG
Sbjct: 461 DGQVFQGRMLHVLPSTIKKDEG 482
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 9/156 (5%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++ + F GT+TD LK+T +GKFR+F FIG+ ED A+AAL +FN +++ ++R+
Sbjct: 13 MKEDRFRGLFAAFGTLTDCALKFTKDGKFRKFGFIGFKSEDDAKAALTHFNKSFIDTARV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG--------KK 140
VE C + GD KP++WSK++ A +K+ + K E +D K KK
Sbjct: 73 SVEFCKSFGDPQKPRAWSKHSQKPPATEKVPEKSAKSSGHAEFKQDEKKKKKNQPEDFKK 132
Query: 141 SKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEEN 176
+ + F DFL+ H K S+ SN E+ ++N
Sbjct: 133 LEGEEAFQDFLEAH-KKRSQATTWSNDTKAEEAKKN 167
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 142/334 (42%), Gaps = 54/334 (16%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKALNKNK 279
R I+VKNLPAG + L+ F L V G+ A + F + +A K
Sbjct: 581 RSKTVILVKNLPAGTEATALEEVFGAYGSLGRVLLPEGGVTAIVEFLEPTEAKRAFTK-L 639
Query: 280 SFWKGKQLNIY----------------------KYSKDNSAKYSGAADDNNNASMENIKA 317
++ K + + +Y K + A+ G+ D ME K
Sbjct: 640 AYSKFRHIPLYLEWAPMGVFSGPGKRKPENPGVKKESEGPAETGGSKVD--EVQMETEKG 697
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK- 376
+ + ++ E+ +FV+NL++ TE+ L ++F K G + + ++ DK
Sbjct: 698 QIEEEDDEDDDDDEESLPGCTLFVKNLNFNTTEETLKEVFTKAGAVKSCT--VSRKRDKA 755
Query: 377 ----TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISE 432
+ GF V + PEHA +A + L G G L + K +E + V S
Sbjct: 756 GTLLSMGFGFVEYRKPEHAQKALKQLQGCSVDGHQLEV-----KISERAIKSPV---TST 807
Query: 433 RKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------- 485
RK Q ++ + ILV+N+P++ +++ LF FG+L V +P +
Sbjct: 808 RK----TQRLKKQKSSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGF 863
Query: 486 GLVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
G V+FL K AK AFN+L + T L LEWA
Sbjct: 864 GFVDFLTKQDAKQAFNTLCHSTHLYGRRLVLEWA 897
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 27/201 (13%)
Query: 559 QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
+ G E E +++ EP T+ ++ FN TE ++R P+A V
Sbjct: 270 ESGAGEKMEGLKKGGANEPTTSYTVKLRGAPFNVTEQNVREFLVPLRPVAIRIVRNAHGN 329
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL------KRSNRNLESEATT 672
K+ GY FV F E + +ALK + + IEL K++ + + A T
Sbjct: 330 KT-------GYVFVDFNNEEEVQKALK-RNHEYMGGRYIELFYEEHSKKTKPSSKDPART 381
Query: 673 VKRKSSNVAKQT-----GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 727
+R + V ++ ++ VRN+P+ + + ++E+LF +G L + P GL
Sbjct: 382 WQR-TKKVDEEDEDLSDSGRLFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPI----DGLT 436
Query: 728 ---RGFGFVEFITKNEAKRAM 745
+GF FV ++ A +A
Sbjct: 437 KKPKGFAFVTYMFPEHAVKAF 457
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ LF AFG L L K G R FGF+ F ++++AK A+
Sbjct: 2 SRLIVKNLPSGMKEDRFRGLFAAFGTLTDCAL--KFTKDGKFRKFGFIGFKSEDDAKAAL 59
Query: 746 KALCQS 751
+S
Sbjct: 60 THFNKS 65
>gi|357616005|gb|EHJ69949.1| hypothetical protein KGM_10362 [Danaus plexippus]
Length = 888
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/354 (51%), Positives = 241/354 (68%), Gaps = 19/354 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAFN+ + RSK ILVKNLP T +++ LF G L R L+P +GIT LV+F++
Sbjct: 522 LDAFNRPAKKRSKTCILVKNLPAGTDKEEIRNLFVKHGQLARFLMPRHGITALVDFIEPF 581
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFA-EAK-EKSKGKE-KEKNEEEGEEGEEEKKE 551
+AK AF LAY+++K PLYLEWAPE VF +AK E GKE + N+ E E G+E
Sbjct: 582 EAKKAFGKLAYSQYKSAPLYLEWAPENVFVKDAKTETVSGKETSDVNKTEAESGDE---- 637
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
+ +E PE + VEE +PE DTTL+IKNLNF +TE++++ HF CG + SV
Sbjct: 638 TSVKE------PETK-MVEEPSNEQPENDTTLFIKNLNFKTTEETLKSHFSACGKVHSVV 690
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
+A+KKDPK+ Q LSMGYGFVQ+ + +ALKVLQ S+LD +ELKRS R +E
Sbjct: 691 IAKKKDPKNQTQLLSMGYGFVQYIKKTDTLEALKVLQGSTLDGKTLELKRSERGNITEVK 750
Query: 672 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM-VGSGLHRGF 730
T K+ S + Q G+KIL+RN+PFQA + E+ E+F+AFGE+K +RLP+K+ VGS HRGF
Sbjct: 751 TSKKTSKDTI-QNGTKILIRNVPFQANRKELHEIFRAFGEIKTLRLPQKLTVGSEQHRGF 809
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDI---RKRTNRYF 781
FV++ +K +AK A ALCQSTHLYGRRLVLEWA+++D EDI RKRT F
Sbjct: 810 AFVDYYSKADAKSAFDALCQSTHLYGRRLVLEWADQSDENEDIDLLRKRTAEKF 863
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/439 (40%), Positives = 256/439 (58%), Gaps = 55/439 (12%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
K+T E+LK F EKG VTDVQLKYT +GKFR F F+GY E+QA AA ++F+ T+V S +
Sbjct: 12 KVTVEKLKDLFGEKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAAAAREHFDGTFVNSMK 71
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLH----NIAPKQDL--KPEHTKDS--KPGK 139
I VE C+NLGD KP++WSKYA DS+AY+KLH ++ PK++ K E K+ + K
Sbjct: 72 INVEVCANLGDEKKPRAWSKYATDSTAYKKLHKDETSVKPKKEKVNKAERNKNKIKELLK 131
Query: 140 KSKNDPTFSDFLQLHGKDVSKLLP-------------------------LSNKDGEEKEE 174
K K+DP F++F++ H + + + + + + EEK +
Sbjct: 132 KHKDDPLFAEFIEAHVNEKTAWIKEALDAADKSDDDSGVEDETPSKDEKVQDDEAEEKND 191
Query: 175 ENEDESNNQIAHADISDMEYLKLKTKSKD--TAPSDPSVPPVSKAP--VHKRQYHTIVVK 230
+ ++A+ ISD+EY+KL K D T + P P V R + +
Sbjct: 192 IQDAPQKEKVANKQISDLEYMKLLMKKVDGYTEVDNKDAKPEDDKPKKVRNRPLFYVKIT 251
Query: 231 NLPAGVKKKDLKAYFKPLPLASVRT------TFLGMAYIGFKDEKNCNKALNKNKSFWKG 284
LP KKKD+K +FKPL S+R G Y+GF+ EK NKALNK+K F
Sbjct: 252 GLPFKCKKKDIKEFFKPLVPFSIRLPLGKGKKLAGFCYVGFRTEKELNKALNKDKLFIAN 311
Query: 285 KQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNL 344
+++++KY ++ AK + ++ +N K +++ V E I ESGRIFVRNL
Sbjct: 312 HRIHVHKY--EDKAKIAAEQEELHNN----------KKKQEQVNNGESIGESGRIFVRNL 359
Query: 345 SYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFL 404
Y V+E++LT LFEKYGP+AEV +PID + KGFA++TF+MPEHA +AY LDGT F
Sbjct: 360 PYVVSEEELTSLFEKYGPIAEVSMPIDPILRQPKGFAVITFVMPEHAVKAYTELDGTAFC 419
Query: 405 GRMLHLIPGKPKENEGNVD 423
GRM+H++P K ++ E +D
Sbjct: 420 GRMMHILPAKMEKLEEEID 438
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 135/329 (41%), Gaps = 41/329 (12%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYF-KPLPLASVRTTFLGM-AYIGFKDEKNCNKAL 275
P KR I+VKNLPAG K++++ F K LA G+ A + F + KA
Sbjct: 528 PAKKRSKTCILVKNLPAGTDKEEIRNLFVKHGQLARFLMPRHGITALVDFIEPFEAKKAF 587
Query: 276 NKNKSFWKGKQLNIY-------KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQ 328
K ++ + K +Y + KD + + ++ E +E +
Sbjct: 588 GK-LAYSQYKSAPLYLEWAPENVFVKDAKTETVSGKETSDVNKTEAESGDETSVKEPETK 646
Query: 329 FAEDIA-----ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKETDKTK 378
E+ + +F++NL++ TE+ L F G + V++ P ++ +
Sbjct: 647 MVEEPSNEQPENDTTLFIKNLNFKTTEETLKSHFSACGKVHSVVIAKKKDPKNQTQLLSM 706
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAF 438
G+ V ++ +A + L G+ G+ L L + GN I+E K
Sbjct: 707 GYGFVQYIKKTDTLEALKVLQGSTLDGKTLEL----KRSERGN--------ITEVKTSKK 754
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG--------LVEF 490
++ IL++N+P++ +L +F FG++ + +P G V++
Sbjct: 755 TSKDTIQNGTKILIRNVPFQANRKELHEIFRAFGEIKTLRLPQKLTVGSEQHRGFAFVDY 814
Query: 491 LQKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
K AK+AF++L T L LEWA
Sbjct: 815 YSKADAKSAFDALCQSTHLYGRRLVLEWA 843
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIK--NLNFNSTEDSIRRHFKKCGPIASVTV 612
E DN+ PE +D+ ++ Y+K L F + I+ FK P+ ++
Sbjct: 224 EVDNKDAKPE------DDKPKKVRNRPLFYVKITGLPFKCKKKDIKEFFK---PLVPFSI 274
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK----VLQNSSLDEHQIELKRSNRNLES 668
+ P G+ L+ G+ +V F T + LN+AL + N + H+ E K +
Sbjct: 275 ---RLPLGKGKKLA-GFCYVGFRTEKELNKALNKDKLFIANHRIHVHKYEDKAKIAAEQE 330
Query: 669 EATTVKRKSSNV--AKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
E K+K V + G +I VRN+P+ + E+ LF+ +G + V +P +
Sbjct: 331 ELHNNKKKQEQVNNGESIGESGRIFVRNLPYVVSEEELTSLFEKYGPIAEVSMPIDPILR 390
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
+GF + F+ A +A L T GR +
Sbjct: 391 Q-PKGFAVITFVMPEHAVKAYTEL-DGTAFCGRMM 423
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 666 LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 725
LES + + K++ + ILV+N+P + E+ LF G+L +P+
Sbjct: 515 LESNGVHLDAFNRPAKKRSKTCILVKNLPAGTDKEEIRNLFVKHGQLARFLMPR------ 568
Query: 726 LHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRT 777
H V+FI EAK+A L S + L LEWA E V+D + T
Sbjct: 569 -HGITALVDFIEPFEAKKAFGKLAYSQY-KSAPLYLEWAPENVFVKDAKTET 618
>gi|38707995|ref|NP_944597.1| probable RNA-binding protein 19 [Danio rerio]
gi|32450902|gb|AAP82506.1| nil per os [Danio rerio]
Length = 926
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/351 (49%), Positives = 238/351 (67%), Gaps = 21/351 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP DL+ALF P G LGRVL+PP G+T +VEFL+
Sbjct: 571 LDSFSQASGERSKCVILVKNLPSGVQVADLEALFSPHGSLGRVLLPPSGLTAIVEFLEPT 630
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE-AKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+AK AF LAYTKF+ VPLYLEWAP VF + + + + KEK+ + + + E++E
Sbjct: 631 EAKRAFMKLAYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKNDSVQNEEEEEE 690
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
EED+Q P +TL+IKNLNF ++E+++++ F KCG + S T++
Sbjct: 691 EEEDDQ-----------------ILPGSTLFIKNLNFITSEETLQKTFSKCGVVKSCTIS 733
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
+K+D G+ LSMGYGFVQ+ T E+ +A++ LQ+ ++DEHQ+E+K S R ++
Sbjct: 734 KKRD--KAGKLLSMGYGFVQYKTPEAAQKAMRQLQHCTVDEHQLEVKISEREVKLGVAQA 791
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
KRK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK +G G HRGFGF+
Sbjct: 792 KRKKQTARKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIG-GSHRGFGFI 850
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTA 784
+F+TK +AK+A ALC STHLYGRRLVLEWA+ + V+D+R++T ++F A
Sbjct: 851 DFLTKQDAKKAFSALCHSTHLYGRRLVLEWADAEETVDDLRRKTAQHFHDA 901
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 141/281 (50%), Gaps = 19/281 (6%)
Query: 147 FSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAP 206
SD L K V K L KD E ++ ++ + S +++ +S +
Sbjct: 215 LSDMDYLRSKMVEKSDMLDEKDDESSASAADENEEDEGEEEEESTVQHTDSAYESGEKTS 274
Query: 207 SDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTT------FLGM 260
S S P + T+ ++ P VK++ +K + PL ++R G
Sbjct: 275 SQKSTRPA----IEPTTEFTVKLRGAPFNVKEQQVKEFMMPLKPVAIRFAKNSDGRNSGY 330
Query: 261 AYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHW 320
Y+ + E +AL +K + G+ + +++ + + + S + + ME K++
Sbjct: 331 VYVDLRSEAEVERALRLDKDYMGGRYIEVFRANNFKNDRRS-----SKRSEME----KNF 381
Query: 321 KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGF 380
+ + ED+AESGR+F+RN+ YT TE+DL ++F K+GPL+EV+ PID T K KGF
Sbjct: 382 VRELKDDEEEEDVAESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGF 441
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGN 421
A VT+++PE+A A LDG F GR+LH++ + K+ + +
Sbjct: 442 AFVTYMIPENAVSALAQLDGQTFQGRVLHVMASRLKKEKAD 482
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F + GT+TD LK+T +GKFR+F F+G+ E+ AQ AL +FN ++V +SR+
Sbjct: 13 MKEERFRKMFADFGTLTDCALKFTKDGKFRKFGFVGFKTEEDAQKALKHFNKSFVDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKY 108
VE C++ GD K + WSK+
Sbjct: 73 TVELCTDFGDPNKARPWSKH 92
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 142/320 (44%), Gaps = 42/320 (13%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKALNKNK 279
R I+VKNLP+GV+ DL+A F P L V G+ A + F + +A K
Sbjct: 581 RSKCVILVKNLPSGVQVADLEALFSPHGSLGRVLLPPSGLTAIVEFLEPTEAKRAFMK-L 639
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQ---------FA 330
++ K + + +Y + + +A + E K+ DSVQ
Sbjct: 640 AYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKN-----DSVQNEEEEEEEEED 694
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTF 385
+ I +F++NL++ +E+ L K F K G + I K+ DK + G+ V +
Sbjct: 695 DQILPGSTLFIKNLNFITSEETLQKTFSKCGVVKSCT--ISKKRDKAGKLLSMGYGFVQY 752
Query: 386 LMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
PE A +A + L L + K +E V K+ ++RK Q +
Sbjct: 753 KTPEAAQKAMRQLQHCTVDEHQLEV-----KISEREV--KLGVAQAKRK----KQTARKQ 801
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAA 499
+ ILV+N+P++ +L+ LF FG+L V +P GI G ++FL K AK A
Sbjct: 802 TTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKA 861
Query: 500 FNSLAY-TKFKEVPLYLEWA 518
F++L + T L LEWA
Sbjct: 862 FSALCHSTHLYGRRLVLEWA 881
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP + T+ ++ FN E ++ P+A + A+ D ++ G Y +V
Sbjct: 284 EPTTEFTVKLRGAPFNVKEQQVKEFMMPLKPVA-IRFAKNSDGRNSG------YVYVDLR 336
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS--SNVAKQT--------- 684
+ + +AL+ L + IE+ R+N N +++ + KR N ++
Sbjct: 337 SEAEVERALR-LDKDYMGGRYIEVFRAN-NFKNDRRSSKRSEMEKNFVRELKDDEEEEDV 394
Query: 685 --GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
++ +RN+P+ + +++E+F G L V P + + +GF FV ++ A
Sbjct: 395 AESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSL-TKKPKGFAFVTYMIPENAV 453
Query: 743 RAMKALCQST------HLYGRRLVLEWAEEA 767
A+ L T H+ RL E A++
Sbjct: 454 SALAQLDGQTFQGRVLHVMASRLKKEKADQG 484
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ ++F FG L L K G R FGFV F T+ +A++A+
Sbjct: 2 SRLIVKNLPNGMKEERFRKMFADFGTLTDCAL--KFTKDGKFRKFGFVGFKTEEDAQKAL 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|156402343|ref|XP_001639550.1| predicted protein [Nematostella vectensis]
gi|156226679|gb|EDO47487.1| predicted protein [Nematostella vectensis]
Length = 862
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 172/348 (49%), Positives = 232/348 (66%), Gaps = 25/348 (7%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
KLD F Q +RSK +I+ KNLPY T +L+ LF FG LGRV++PP GIT L+E +
Sbjct: 534 KLDVFGQAAASRSKTVIVAKNLPYGTNAEELRTLFSAFGQLGRVILPPSGITALIEIPEP 593
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+ A+ AF LAY+KFK PLYLEWAP VF E + K EK +++ ++ EE+
Sbjct: 594 SLARKAFQKLAYSKFKNSPLYLEWAPLDVFVEGQLKKDSLEK--TDKDADQSEEQNA--G 649
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
++E++ +GV TL++KNL+F STE+++++ F GP+ S T+A
Sbjct: 650 SDEEDTEGV-------------------TLFVKNLSFESTEEALKQKFAAVGPVKSATIA 690
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
+KKDPK PG LSMGYGFV+F + S +ALK LQ+S LD H +ELK+S+R E +
Sbjct: 691 KKKDPKKPGSLLSMGYGFVEFCNKASAQEALKSLQHSQLDGHALELKQSHRKSGKEESKR 750
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
K+ + K SKILVRN+PF+A E+ ELF FGE+K +RLPKKM G+G HRGF FV
Sbjct: 751 KKSAKQKQKS--SKILVRNVPFEATTKEIRELFSTFGEIKTLRLPKKMTGTGPHRGFAFV 808
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+F+TK +AKRA +ALC STHLYGRRLVLEWAE+ D+V+ +RKRT +F
Sbjct: 809 DFLTKQDAKRAFEALCTSTHLYGRRLVLEWAEDEDDVDTLRKRTADHF 856
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 229/457 (50%), Gaps = 87/457 (19%)
Query: 42 GTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTK 101
G +TD++L T +GKFRRF F+GY E QA+ AL YFNN+++ +S+I+V+ NLGD
Sbjct: 1 GEITDIKLCRTKDGKFRRFGFVGYKTEKQAENALKYFNNSFIDTSKIQVDLARNLGDKDA 60
Query: 102 PKSWSKYAPDSSAYQK-LHNIAPKQDLKPEHTKDSKPGKKSK-----------NDPTFSD 149
P+ WSKY+ SSAYQK + + K + K D KK DP F +
Sbjct: 61 PRPWSKYSEHSSAYQKKVKKLLEKNEDKVGAKDDKVMKKKKSKEKVKGLEELDEDPEFQE 120
Query: 150 FLQLHGKDVSKLLPLSN-------KDGEEKE---------------------EENEDESN 181
F+ H K L SN ++ EKE E+N D+++
Sbjct: 121 FVSAHESRSKKSL-WSNDTLISKQRNSNEKETKMAVKFEDSDESDDDLTEDMEQNTDDNS 179
Query: 182 NQIA-HADISDMEYLKLKTKSKDTAPS-----------------DPSVPPVSKAPVHKRQ 223
N +A + ISDM+YL+ K S T D S P + V + Q
Sbjct: 180 NTVAKDSSISDMDYLRTKVTSSKTESDTDVNKEFDSDDDREETIDASKNPDGSSDVDEPQ 239
Query: 224 YH------------TIVVKNLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGF 265
T ++ LP K K + +F PL ++R G A++ F
Sbjct: 240 ETPQPDKPKPTTPWTCKMRGLPFKAKDKHILEFFSPLKPVAIRFVMNKKGQPSGCAFVDF 299
Query: 266 KDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQED 325
+ + KAL +NK + +G+ + ++K + D +NN + K+ K QE
Sbjct: 300 SSKSDLEKALKRNKDYLQGRYIELFKDTN---------RDFDNNKQGDGEKSWMRKLQEK 350
Query: 326 SVQFAED-IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVT 384
E+ I ESGR+F+RNL+Y+ +E+D+ LFEK+GPL+EV LP+DK T+KT G VT
Sbjct: 351 GDDEEEEPIGESGRLFLRNLAYSCSEEDIQHLFEKFGPLSEVNLPLDKHTNKTIGIGFVT 410
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGN 421
FLMPEHA +A+ LDGTVF GR+LH++P K K+ E N
Sbjct: 411 FLMPEHAVKAFNELDGTVFQGRLLHILPAKAKKEESN 447
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 127/333 (38%), Gaps = 74/333 (22%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASV------------RTTFLGMA 261
R IV KNLP G ++L+ F LP + + R F +A
Sbjct: 545 RSKTVIVAKNLPYGTNAEELRTLFSAFGQLGRVILPPSGITALIEIPEPSLARKAFQKLA 604
Query: 262 YIGFKDEKNCNKALNKNKSFWKGKQLNIY---KYSKDNSAKYSGAADDNNNASMENIKAK 318
Y FK N L + + L+++ + KD+ K AD
Sbjct: 605 YSKFK-----NSPL-----YLEWAPLDVFVEGQLKKDSLEKTDKDAD------------- 641
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-- 376
+S+E + E+ E +FV+NLS+ TE+ L + F GP+ + K+ K
Sbjct: 642 --QSEEQNAGSDEEDTEGVTLFVKNLSFESTEEALKQKFAAVGPVKSATIAKKKDPKKPG 699
Query: 377 ---TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISER 433
+ G+ V F A +A + L + G L L + H +
Sbjct: 700 SLLSMGYGFVEFCNKASAQEALKSLQHSQLDGHALEL-------------KQSHRKSGKE 746
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITG 486
+ + + ILV+N+P+ +++ LF FG++ + +P P+
Sbjct: 747 ESKRKKSAKQKQKSSKILVRNVPFEATTKEIRELFSTFGEIKTLRLPKKMTGTGPHRGFA 806
Query: 487 LVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
V+FL K AK AF +L T L LEWA
Sbjct: 807 FVDFLTKQDAKRAFEALCTSTHLYGRRLVLEWA 839
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 27/232 (11%)
Query: 544 EGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDT--TLYIKNLNFNSTEDSIRRHF 601
+ +++++E N G +V+E E + +P+P T T ++ L F + + I F
Sbjct: 214 DSDDDREETIDASKNPDGSSDVDEPQETPQPDKPKPTTPWTCKMRGLPFKAKDKHILEFF 273
Query: 602 KKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL-K 660
P+A V KK S G FV F ++ L +ALK L IEL K
Sbjct: 274 SPLKPVAIRFVMNKKGQPS-------GCAFVDFSSKSDLEKALK-RNKDYLQGRYIELFK 325
Query: 661 RSNRNLESEATTVKRKSSNVAKQT------------GSKILVRNIPFQAKQSEVEELFKA 708
+NR+ ++ KS Q ++ +RN+ + + +++ LF+
Sbjct: 326 DTNRDFDNNKQGDGEKSWMRKLQEKGDDEEEEPIGESGRLFLRNLAYSCSEEDIQHLFEK 385
Query: 709 FGELKFVRLP-KKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
FG L V LP K + G GFV F+ A +A L T GR L
Sbjct: 386 FGPLSEVNLPLDKHTNKTI--GIGFVTFLMPEHAVKAFNEL-DGTVFQGRLL 434
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 44/259 (16%)
Query: 167 KDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHT 226
KD EK +++ D+S Q A +D D E + L K+ ++ ++ K+++
Sbjct: 630 KDSLEKTDKDADQSEEQNAGSDEEDTEGVTLFVKNLSFESTEEAL---------KQKFAA 680
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQ 286
+ KKKD K KP L S +G ++ F ++ + +AL KS + Q
Sbjct: 681 VGPVKSATIAKKKDPK---KPGSLLS-----MGYGFVEFCNKASAQEAL---KSL-QHSQ 728
Query: 287 LNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSY 346
L+ + S + SG K + + A+ +S +I VRN+ +
Sbjct: 729 LDGHALELKQSHRKSG------------------KEESKRKKSAKQKQKSSKILVRNVPF 770
Query: 347 TVTEDDLTKLFEKYGPLAEVILPIDKE-TDKTKGFALVTFLMPEHATQAYQHLDGTVFL- 404
T ++ +LF +G + + LP T +GFA V FL + A +A++ L + L
Sbjct: 771 EATTKEIRELFSTFGEIKTLRLPKKMTGTGPHRGFAFVDFLTKQDAKRAFEALCTSTHLY 830
Query: 405 GRMLHLIPGKPKENEGNVD 423
GR L L + E+E +VD
Sbjct: 831 GRRLVL---EWAEDEDDVD 846
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 20/100 (20%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNS 502
+ ++NL Y D++ LFE FG L V +P GI G V FL A AFN
Sbjct: 365 LFLRNLAYSCSEEDIQHLFEKFGPLSEVNLPLDKHTNKTIGI-GFVTFLMPEHAVKAFNE 423
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEG 542
L T F+ L++ A K K++E N+ EG
Sbjct: 424 LDGTVFQGRLLHILPA------------KAKKEESNDNEG 451
>gi|348528569|ref|XP_003451789.1| PREDICTED: probable RNA-binding protein 19 [Oreochromis niloticus]
Length = 926
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/347 (51%), Positives = 235/347 (67%), Gaps = 20/347 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q ARS +ILVKNLP ++L+ LF P+G LGRVL+PP G+T +VEFL+
Sbjct: 572 LDSFSQAAAARSNTVILVKNLPAGVQASELEELFSPYGSLGRVLLPPSGLTAIVEFLEPT 631
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AK AF LAY+KF VPLYLEWAP GVF E K+ + EE+ +E EEE+ ++
Sbjct: 632 EAKRAFTRLAYSKFHHVPLYLEWAPVGVFVAKPEPVLEKKAAEKEEKKKENEEEEGDDEE 691
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
EE+ + P +TL+IKNLNFN+TE+ + F KCG + S T+++
Sbjct: 692 EEEEEA-----------------LPGSTLFIKNLNFNTTEEKLLETFSKCGKVKSCTISK 734
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
KKD G+ LSMGYGFVQ+ T E+ +AL+ LQ+ +D+HQ+ELK S R + T K
Sbjct: 735 KKD--KTGKLLSMGYGFVQYQTAEAAQKALRQLQHCKVDDHQLELKVSERATRTAVVTRK 792
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
+K ++ KQTGSKILVRN+PFQA E+ ELF FGELK VRLPKK GSG HRGFGFV+
Sbjct: 793 KKQAD-KKQTGSKILVRNVPFQASVREIRELFCTFGELKTVRLPKKAAGSGSHRGFGFVD 851
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
F+TK +AK+A ALC STHLYGRRLVLEWA+ + VE +R++T +F
Sbjct: 852 FLTKQDAKKAFAALCHSTHLYGRRLVLEWADAEETVEALRRKTAEHF 898
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 14/205 (6%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRT------TFLGMAYIGFKDEKNCNKALNKNK 279
T+ ++ +P VK+K ++ + PL A+VR G Y+ E+ KAL KNK
Sbjct: 290 TVKLRGVPFNVKEKQIREFMTPLKPAAVRIGKNESGNRTGYVYVDLHSEEEVEKALKKNK 349
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
+ G+ + +++ A N E +++ + + ED++ESGR+
Sbjct: 350 DYIGGRYIEVFRVD--------AFAGKNKRDGKEKETDRNFSRKLKEDEEEEDVSESGRL 401
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
F+RNL YT TE+D+ +LF K+GPL++V+ PID T + KGFA VT+++PE+A A LD
Sbjct: 402 FIRNLPYTCTEEDIKELFSKHGPLSDVLFPIDTLTKRPKGFAFVTYMIPENAVTALAQLD 461
Query: 400 GTVFLGRMLHLIPGKPKENEGNVDG 424
G +F GRMLHL+P K+ + + D
Sbjct: 462 GHIFQGRMLHLLPSTAKKEKSDSDA 486
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 77/136 (56%), Gaps = 10/136 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++ ++ F GT+TD LK+T +GKFR+F F+G+ E+ A AL +FN ++V +SR+
Sbjct: 13 MKEDRFRSMFAAFGTLTDCSLKFTKDGKFRKFGFVGFKSEEDANKALKHFNKSFVDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKY----------APDSSAYQKLHNIAPKQDLKPEHTKDSKPG 138
VE C GD +K ++WSK+ AP + +K+ N ++ K + + S
Sbjct: 73 TVEMCKAFGDPSKARAWSKHTQSSGQGKPSAPADTDGKKVGNTCGREITKKQKKESSSIL 132
Query: 139 KKSKNDPTFSDFLQLH 154
+ +P F +FL +H
Sbjct: 133 GDLEEEPEFKEFLSVH 148
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 57/208 (27%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-----KGFALVTFLMPEHATQ 393
+F++NL++ TE+ L + F K G + I K+ DKT G+ V + E A +
Sbjct: 703 LFIKNLNFNTTEEKLLETFSKCGKVKSCT--ISKKKDKTGKLLSMGYGFVQYQTAEAAQK 760
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD------AFNQVVEARSK 447
A + L HC + + +L+ A V R K
Sbjct: 761 ALRQLQ---------------------------HCKVDDHQLELKVSERATRTAVVTRKK 793
Query: 448 RI---------ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFL 491
+ ILV+N+P++ +++ LF FG+L V +P G V+FL
Sbjct: 794 KQADKKQTGSKILVRNVPFQASVREIRELFCTFGELKTVRLPKKAAGSGSHRGFGFVDFL 853
Query: 492 QKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
K AK AF +L + T L LEWA
Sbjct: 854 TKQDAKKAFAALCHSTHLYGRRLVLEWA 881
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 22/197 (11%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP + T+ ++ + FN E IR P A+V + + + GY +V +
Sbjct: 284 EPTTEFTVKLRGVPFNVKEKQIREFMTPLKP-AAVRIGKNESGNR------TGYVYVDLH 336
Query: 636 TRESLNQALK---------VLQNSSLDEHQIELKRSNRNLESE---ATTVKRKSSNVAKQ 683
+ E + +ALK ++ +D + KR + E++ + +K
Sbjct: 337 SEEEVEKALKKNKDYIGGRYIEVFRVDAFAGKNKRDGKEKETDRNFSRKLKEDEEEEDVS 396
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
++ +RN+P+ + +++ELF G L V P + + +GF FV ++ A
Sbjct: 397 ESGRLFIRNLPYTCTEEDIKELFSKHGPLSDVLFPIDTL-TKRPKGFAFVTYMIPENAVT 455
Query: 744 AMKALCQSTHLYGRRLV 760
A+ L H++ R++
Sbjct: 456 ALAQL--DGHIFQGRML 470
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +F AFG L L K G R FGFV F ++ +A +A+
Sbjct: 2 SRLIVKNLPNGMKEDRFRSMFAAFGTLTDCSL--KFTKDGKFRKFGFVGFKSEEDANKAL 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+NL V +L +LF YG L V+LP T A+V FL P A +A+ L
Sbjct: 587 ILVKNLPAGVQASELEELFSPYGSLGRVLLPPSGLT------AIVEFLEPTEAKRAFTRL 640
Query: 399 DGTVFLGRMLHLIP 412
+ F H +P
Sbjct: 641 AYSKF-----HHVP 649
>gi|443723982|gb|ELU12200.1| hypothetical protein CAPTEDRAFT_225018 [Capitella teleta]
Length = 891
Score = 328 bits (841), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 168/347 (48%), Positives = 235/347 (67%), Gaps = 20/347 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF+Q ARSK +IL KNLP + +LK FE FG LGR+L+PP G++ ++EF++
Sbjct: 536 LDAFSQPAAARSKTVILAKNLPANSTADELKEKFEKFGTLGRLLLPPSGLSAIIEFMEPT 595
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF SLAYTKF +PLYLEWAP VFA K +E EE E E+ KE+
Sbjct: 596 EARMAFRSLAYTKFNHLPLYLEWAPVDVFA-----GPAKTEEDKREEAETKEKNAKEDGE 650
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
E++ + E P ++++KN+NF + +D++ + F KCG I S +V++
Sbjct: 651 EKEGSE-------------ESTPREGCSVFVKNINFETQDDALHKLFSKCGRIISASVSK 697
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
KKD K+PG LSMG+GFV++ ES +ALK LQ+S LD H++ELK S+R + ++ +
Sbjct: 698 KKDIKNPGSMLSMGFGFVEYAKPESAQKALKTLQHSVLDAHRLELKLSHR-MTAKQQIAQ 756
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
RK + V + SKILVRNIPF+AKQ EV++LF FGELK RLP+K+ GSG HRGF FV+
Sbjct: 757 RKKTQVLGKASSKILVRNIPFEAKQDEVKQLFSVFGELKTARLPRKLAGSGQHRGFAFVD 816
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRT-NRY 780
F++K +A+RA ALC STHLYGRRLVLEWA+ ++V+++R +T +RY
Sbjct: 817 FLSKEDAQRAFDALCHSTHLYGRRLVLEWADPDESVDELRMKTASRY 863
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 234/448 (52%), Gaps = 70/448 (15%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
I +E+LK F GT+T+ QLKYTT+G FRRFAF+GY +E +A AA+ +FNNTY+ +S+I
Sbjct: 13 IKEERLKNTFGVMGTITNCQLKYTTDGIFRRFAFVGYTKESEADAAIKHFNNTYIDTSKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHN------IAPKQDLKPEHTKDSKPGKKS- 141
VE + L D KP++WSKY+ DSSAYQ+ + ++ + + K+ K K+
Sbjct: 73 TVELANELTDAMKPRAWSKYSKDSSAYQRANKETIKEKKDAEKKERQKRRKEEKEQKRQE 132
Query: 142 ---------KNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAH------ 186
+ D F +FLQ++ +K ++ +EN + ++
Sbjct: 133 KLNALLADIQGDEGFDEFLQVNKSKSTKAFWGNDDAPSAAHQENMQQKKEKVDSGEEEEE 192
Query: 187 ------------------------ADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKR 222
A ++D+EYLK K + ++ S + K
Sbjct: 193 DMEDEEMAPSSSSAGKPAPVDKKTAKMTDLEYLKSKMTGVEDEETEGSEEEEEEGREEKE 252
Query: 223 QY------HTIVVKNLPAGVKKKDLKAYFKPLPLASV-----RTTFLGMAYIGFKDEKNC 271
+ ++I +K P VKK + A+FKP+ L V ++ + + EK+
Sbjct: 253 EEKPEEFTYSIKMKGAPNTVKKNQIVAFFKPVELLDVVIPNSKSKSGKVVSVEVASEKDL 312
Query: 272 NKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE 331
N+AL KNK+ K++ ++K + + + + K K W+ + D+ + E
Sbjct: 313 NEALKKNKNCIGPKKIFLHKVIEKKAQQ------------PKEQKPKLWEMRADNEE-CE 359
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
DIAESGR++VRNL+Y EDDL +LF KYG L+EV LPID T K KGFA V+F+ PEHA
Sbjct: 360 DIAESGRLYVRNLAYCCKEDDLEQLFTKYGTLSEVHLPIDSFTKKVKGFAFVSFMFPEHA 419
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENE 419
+A+Q LDG ++GR+LH++PGK K E
Sbjct: 420 VKAFQELDGKSWMGRILHILPGKEKTEE 447
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPE 389
E +FV+N+++ +D L KLF K G + + K+ + GF V + PE
Sbjct: 662 EGCSVFVKNINFETQDDALHKLFSKCGRIISASVSKKKDIKNPGSMLSMGFGFVEYAKPE 721
Query: 390 HATQAYQHLDGTVFLGRML-----HLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEA 444
A +A + L +V L H + K + I++RK QV+
Sbjct: 722 SAQKALKTLQHSVLDAHRLELKLSHRMTAKQQ-------------IAQRKK---TQVLGK 765
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
S + ILV+N+P+ ++K LF FG+L +P + V+FL K A+
Sbjct: 766 ASSK-ILVRNIPFEAKQDEVKQLFSVFGELKTARLPRKLAGSGQHRGFAFVDFLSKEDAQ 824
Query: 498 AAFNSLAY-TKFKEVPLYLEWA 518
AF++L + T L LEWA
Sbjct: 825 RAFDALCHSTHLYGRRLVLEWA 846
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPID-KETDKTKGFALVTFLMPEHATQA 394
S +I VRN+ + +D++ +LF +G L LP + + +GFA V FL E A +A
Sbjct: 767 SSKILVRNIPFEAKQDEVKQLFSVFGELKTARLPRKLAGSGQHRGFAFVDFLSKEDAQRA 826
Query: 395 YQHLDGTVFL-GRMLHLIPGKPKEN 418
+ L + L GR L L P E+
Sbjct: 827 FDALCHSTHLYGRRLVLEWADPDES 851
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
++ VRN+ + K+ ++E+LF +G L V LP + +GF FV F+ A +A +
Sbjct: 366 RLYVRNLAYCCKEDDLEQLFTKYGTLSEVHLPIDSFTKKV-KGFAFVSFMFPEHAVKAFQ 424
Query: 747 ALCQSTHLYGRRL-VLEWAEEADNVEDIRKRTN 778
L + + GR L +L E+ + ED +N
Sbjct: 425 ELDGKSWM-GRILHILPGKEKTEEQEDGNDESN 456
>gi|449666027|ref|XP_002162990.2| PREDICTED: probable RNA-binding protein 19-like [Hydra
magnipapillata]
Length = 914
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/348 (48%), Positives = 232/348 (66%), Gaps = 36/348 (10%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
KLD F Q RSK +ILVKNLP +TL ++L+ +F +GDLGR+L+PP+GIT +VEF+Q
Sbjct: 574 KLDCFGQANSLRSKTVILVKNLPPQTLTSELREIFSKYGDLGRLLMPPFGITAIVEFIQS 633
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
AK AFN+LAY+KFK PLYLEWAP V + G+ K+ E++ E+ E E + N
Sbjct: 634 KDAKNAFNNLAYSKFKHTPLYLEWAPLDVLS-------GEVKKVVEKKVEDVESEDEIND 686
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
A+ L++KNLNFN+ E+ + F CG I +VT+A
Sbjct: 687 AQ-------------------------AVLFVKNLNFNTVEERFKEFFSSCGEIKTVTIA 721
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
+K+DPK+P LSMGYGF+++ ES+ +ALK+LQ+ LD H++ELK+S+R ES V
Sbjct: 722 KKQDPKNPSAMLSMGYGFIEYKKIESVEKALKLLQHCELDGHKLELKKSHR--ESILPKV 779
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
RK +N Q SK++VRNIPF+A E++ELF FG +K +RLPKK+ G+ HRGF F+
Sbjct: 780 SRKRANEKNQVSSKMVVRNIPFEATVKELQELFSTFGHIKSLRLPKKITGT--HRGFAFI 837
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+F TK +AKRA KALCQSTHLYGRRLVLEWA++ D+V+ +RK+T +
Sbjct: 838 DFTTKQDAKRAFKALCQSTHLYGRRLVLEWADDDDSVDLLRKKTAELY 885
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 147/277 (53%), Gaps = 53/277 (19%)
Query: 173 EEENEDESNNQIAHADISDMEYLKLKT------------KSKDTAPSDPSVPP------- 213
E+ N++E+ +I SD+E+LKLKT K+++ A D +
Sbjct: 231 EQNNKNENVAKIKDQ-TSDLEWLKLKTLQSKGESTESDEKTEEAADRDLNSDDKENSNDL 289
Query: 214 ----VSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVR------TTFLGMAYI 263
+ K+ + T+ ++ +P +K++ +FKPL + +R G A++
Sbjct: 290 QENGMKKSFDQDIKSMTVKMRGIPFKCSEKEVIEFFKPLIIDDIRFPKNKDGKSSGYAFV 349
Query: 264 GFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA----KH 319
FK ++ AL K+K +G+ + ++ + +EN+K K
Sbjct: 350 DFKTIEDVKSALKKDKQKIQGRYIELFPVN-----------------DLENLKQNDFNKK 392
Query: 320 WKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKG 379
W + D EDI+++GR+FVRNLSYT TED LT LF ++GPL E+ LPIDK ++KT G
Sbjct: 393 WTQKGDEAD--EDISDTGRLFVRNLSYTCTEDSLTNLFSQFGPLVEINLPIDKNSNKTTG 450
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
FA VTF+M +HA +A LDG++F GR+LH++PGK K
Sbjct: 451 FAFVTFMMADHAIKAMSKLDGSIFEGRILHILPGKSK 487
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 13/213 (6%)
Query: 541 EGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRH 600
E +E EE + D+++ +++EN + + T+ ++ + F +E +
Sbjct: 265 ESDEKTEEAADRDLNSDDKENSNDLQENGMKKSFDQDIKSMTVKMRGIPFKCSEKEVIEF 324
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKV----LQNSSLDEHQ 656
FK I + + KD KS G Y FV F T E + ALK +Q ++
Sbjct: 325 FKPL-IIDDIRFPKNKDGKSSG------YAFVDFKTIEDVKSALKKDKQKIQGRYIELFP 377
Query: 657 I-ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFV 715
+ +L+ +N ++ T K ++ ++ VRN+ + + + LF FG L +
Sbjct: 378 VNDLENLKQNDFNKKWTQKGDEADEDISDTGRLFVRNLSYTCTEDSLTNLFSQFGPLVEI 437
Query: 716 RLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
LP S GF FV F+ + A +AM L
Sbjct: 438 NLPIDK-NSNKTTGFAFVTFMMADHAIKAMSKL 469
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ VRN+ + T +L +LF +G + + LP K T +GFA + F + A +A+
Sbjct: 791 SSKMVVRNIPFEATVKELQELFSTFGHIKSLRLP-KKITGTHRGFAFIDFTTKQDAKRAF 849
Query: 396 QHL-DGTVFLGRMLHL 410
+ L T GR L L
Sbjct: 850 KALCQSTHLYGRRLVL 865
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 666 LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 725
LESE + + ++ + ILV+N+P Q SE+ E+F +G+L + +P + +
Sbjct: 568 LESEGVKLDCFGQANSLRSKTVILVKNLPPQTLTSELREIFSKYGDLGRLLMPPFGITA- 626
Query: 726 LHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
VEFI +AK A L S + L LEWA
Sbjct: 627 ------IVEFIQSKDAKNAFNNLAYSKFKHT-PLYLEWA 658
>gi|195175692|ref|XP_002028560.1| GL16640 [Drosophila persimilis]
gi|194104901|gb|EDW26944.1| GL16640 [Drosophila persimilis]
Length = 928
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 235/352 (66%), Gaps = 11/352 (3%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+L AF++ + RS+ +IL KNLP T+ ++L +F FG +GR+++PP G+T L+EF +
Sbjct: 540 RLSAFDEPSQKRSRTVILAKNLPATTVVSELSPIFSRFGPIGRIVLPPSGVTALIEFCEP 599
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
++A+ AF LAY+KFK PLYLEWAPE F K K +EE E EK
Sbjct: 600 SEARQAFKKLAYSKFKNAPLYLEWAPEQTFVTTLSNEPIIRKTK-QEEPRRKEPEKTTPA 658
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
+E+ + +E + ED EPEPDTTL+++NLNF + ++++ HF+ G I +V +A
Sbjct: 659 IKEETR------DERLAEDAGDEPEPDTTLFLRNLNFKTVKETVLEHFRHLGSIHTVEIA 712
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
++KDP++P QF S+GYGF+QF + ALK LQ + +D + +ELKRS+R L ++ V
Sbjct: 713 KRKDPQNPHQFSSLGYGFIQFKNASVADHALKNLQLTHIDGNPVELKRSDRVLRNQNEDV 772
Query: 674 KRKSSNVA-KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFG 731
R+ KQTG+KILVRNIPFQA+ EV E+FKAFGEL+ +R+PKK+ G HRGFG
Sbjct: 773 SRRGQAAQKKQTGTKILVRNIPFQAQYREVLEVFKAFGELRSLRIPKKVTAGEDAHRGFG 832
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD--NVEDIRKRTNRYF 781
FV+FITK +AKRA AL STHLYGRRLVLEWA D ++E++RKRT F
Sbjct: 833 FVDFITKADAKRAFDALSASTHLYGRRLVLEWASHDDQNDLEELRKRTAARF 884
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 174/435 (40%), Positives = 243/435 (55%), Gaps = 54/435 (12%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+++L+ F KG +TD+QLKYT +GKFR+F F+GY E++AQ A+ +FNNT + +SR+
Sbjct: 13 ITEDKLRHIFGTKGNITDLQLKYTPDGKFRQFCFVGYSTEEEAQDAIQHFNNTCIQTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKL----------------HNIAPKQDLKPEHT 132
+VE C+ LG KPKSWSKY+ D K+ PK+D T
Sbjct: 73 RVESCAALGSEAKPKSWSKYSKDCKNLDKIKVAEEEEEKKESAESKKTAKPKKD-----T 127
Query: 133 KDSKPGKKSKNDPTFSDFLQLH-------GKDVSKLLPLSNK--DGEEKEEENE------ 177
K + K K+DP F +FLQ H G D+ K + K D E N+
Sbjct: 128 KVVEILGKHKDDPEFQEFLQAHEKTRTLWGNDLGKTEQNAEKKDDAECTAGRNDSGVDAD 187
Query: 178 ---------------DESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKR 222
D+ ++A I+D+EY+K K AP+ S +KA
Sbjct: 188 DVEYEQEAYEEESQLDDEGVKLAEKPITDLEYMKFLMMGKAAAPTASSPTKKTKAEKSGL 247
Query: 223 QYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT--TFLGMAYIGFKDEKNCNKALNKNKS 280
TI + N+P K++++ +FKPL SVR G Y+GFK EK+ KA+ KNKS
Sbjct: 248 DLFTIKIHNVPYKTKRQEVLKFFKPLKPYSVRLPGKVHGFCYVGFKTEKDMAKAMVKNKS 307
Query: 281 FWKGKQLNIYKYSKDNSA-KYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
F GKQ+ +++ N K S + + NA E+ WK Q+D ++ EDI+ESGRI
Sbjct: 308 FINGKQIFFSDFTEKNKVTKASKSGLPSPNAPAESQAIAKWKQQQDGLRKEEDISESGRI 367
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
F RNL+YT TE+++ KLFE+YGP+ EV LP+DK T K KGF VT++MPEHA +A+ LD
Sbjct: 368 FFRNLAYTTTEEEMQKLFEQYGPVVEVNLPVDKLTRKIKGFGTVTYMMPEHALKAFNALD 427
Query: 400 GTVFLGRMLHLIPGK 414
GT F GR+LHL+PGK
Sbjct: 428 GTDFNGRLLHLLPGK 442
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 128/323 (39%), Gaps = 69/323 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
I +NL Y T +++ LFE +G + V +P +T G V ++ A AFN+L
Sbjct: 367 IFFRNLAYTTTEEEMQKLFEQYGPVVEVNLPVDKLTRKIKGFGTVTYMMPEHALKAFNAL 426
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
T F L+L GKE +KN++ + +K ++ ++
Sbjct: 427 DGTDFNGRLLHL--------------LPGKELDKNDQ----SQADKADDFGLSFKEKKAL 468
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
++++N ++ P TL+ L N+ D + + FK S +
Sbjct: 469 KLKKNAQK-----PIGWNTLF---LGANAVADLLAKQFKT----------------SKER 504
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
L G R +L + V IE+KR LE E + K+
Sbjct: 505 ILDTSEGGSSAAVRLALGETQIV----------IEMKRF---LEEEGVRLSAFDEPSQKR 551
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ + IL +N+P SE+ +F FG + + LP V + +EF +EA++
Sbjct: 552 SRTVILAKNLPATTVVSELSPIFSRFGPIGRIVLPPSGVTA-------LIEFCEPSEARQ 604
Query: 744 AMKALCQSTHLYGRRLVLEWAEE 766
A K L S L LEWA E
Sbjct: 605 AFKKLAYS-KFKNAPLYLEWAPE 626
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 133/340 (39%), Gaps = 60/340 (17%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKAL 275
P KR I+ KNLPA +L F P+ + G+ A I F + +A
Sbjct: 547 PSQKRSRTVILAKNLPATTVVSELSPIFSRFGPIGRIVLPPSGVTALIEFCEPSEARQAF 606
Query: 276 N-------KNKSF---WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQED 325
KN W +Q + S + + + + + A +++++
Sbjct: 607 KKLAYSKFKNAPLYLEWAPEQTFVTTLSNEPIIRKTKQEEPRRKEPEKTTPAIKEETRDE 666
Query: 326 SVQFAEDIAE----SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKETDK 376
+ AED + +F+RNL++ ++ + + F G + V + P +
Sbjct: 667 --RLAEDAGDEPEPDTTLFLRNLNFKTVKETVLEHFRHLGSIHTVEIAKRKDPQNPHQFS 724
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+ G+ + F A A ++L L I G P V S+R L
Sbjct: 725 SLGYGFIQFKNASVADHALKNL--------QLTHIDGNP----------VELKRSDRVLR 766
Query: 437 AFNQVVEARSKRI--------ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--- 485
N+ V R + ILV+N+P++ ++ +F+ FG+L R L P +T
Sbjct: 767 NQNEDVSRRGQAAQKKQTGTKILVRNIPFQAQYREVLEVFKAFGEL-RSLRIPKKVTAGE 825
Query: 486 ------GLVEFLQKNQAKAAFNSL-AYTKFKEVPLYLEWA 518
G V+F+ K AK AF++L A T L LEWA
Sbjct: 826 DAHRGFGFVDFITKADAKRAFDALSASTHLYGRRLVLEWA 865
>gi|198470219|ref|XP_002133396.1| GA22839 [Drosophila pseudoobscura pseudoobscura]
gi|198145347|gb|EDY72024.1| GA22839 [Drosophila pseudoobscura pseudoobscura]
Length = 927
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 235/352 (66%), Gaps = 11/352 (3%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+L AF++ + RS+ +IL KNLP T+ ++L +F FG +GR+++PP G+T L+EF +
Sbjct: 539 RLSAFDEPSQKRSRTVILAKNLPATTVVSELSPIFSRFGPIGRIVLPPSGVTALIEFCEP 598
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
++A+ AF LAY+KFK PLYLEWAPE F K K +EE E EK
Sbjct: 599 SEARQAFKKLAYSKFKNAPLYLEWAPEQTFVTTLSNEPIIRKTK-QEEPRRKEPEKTTPA 657
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
+E+ + +E + ED EPEPDTTL+++NLNF + ++++ HF+ G I +V +A
Sbjct: 658 IKEETR------DERLAEDAGDEPEPDTTLFLRNLNFKTVKETVLEHFRHLGSIHTVEIA 711
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
++KDP++P QF S+GYGF+QF + ALK LQ + +D + +ELKRS+R L ++ V
Sbjct: 712 KRKDPQNPHQFSSLGYGFIQFKNASVADHALKNLQLTHIDGNPVELKRSDRVLRNQNEDV 771
Query: 674 KRKSSNVA-KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFG 731
R+ KQTG+KILVRNIPFQA+ EV E+FKAFGEL+ +R+PKK+ G HRGFG
Sbjct: 772 SRRGQAAQKKQTGTKILVRNIPFQAQYREVLEVFKAFGELRSLRIPKKVTAGEDAHRGFG 831
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD--NVEDIRKRTNRYF 781
FV+FITK +AKRA AL STHLYGRRLVLEWA D ++E++RKRT F
Sbjct: 832 FVDFITKADAKRAFDALSASTHLYGRRLVLEWASHDDQNDLEELRKRTAARF 883
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 172/435 (39%), Positives = 244/435 (56%), Gaps = 54/435 (12%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+++L+ F KG +TD+QLKYT +GKFR+F F+GY +E++AQ A+ +FNNT + +SR+
Sbjct: 13 ITEDKLRNIFGTKGNITDLQLKYTPDGKFRQFCFVGYSKEEEAQDAIQHFNNTCIQTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKL----------------HNIAPKQDLKPEHT 132
+VE C+ LG KPKSWSKY+ D K+ PK+D T
Sbjct: 73 RVESCAALGSEAKPKSWSKYSKDCKNLDKIKVAEEEEEKKESAESKKTAKPKKD-----T 127
Query: 133 KDSKPGKKSKNDPTFSDFLQLH-------GKDVSKLLPLSNK--DGEEKEEENE------ 177
K + K K+DP F +FLQ H G D+ K + K D E N+
Sbjct: 128 KVVEILGKHKDDPEFQEFLQAHEKTRTLWGNDLGKTEQNAEKKDDAECTAGRNDSGVDAD 187
Query: 178 ---------------DESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKR 222
D+ ++A I+D+EY+K K AP+ + +KA
Sbjct: 188 DVEYQQEAYEEESQLDDEGEKLAEKPITDLEYMKFLMMGKAAAPTASAPTKKTKAEKSGL 247
Query: 223 QYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT--TFLGMAYIGFKDEKNCNKALNKNKS 280
TI + N+P K++++ +FKPL SVR G Y+GFK EK+ KA+ KNKS
Sbjct: 248 DLFTIKIHNVPYKTKRQEVLKFFKPLKPYSVRLPGKVHGFCYVGFKTEKDMAKAMVKNKS 307
Query: 281 FWKGKQLNIYKYSKDNSA-KYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
F GKQ+ +++ N K S + + NA E+ WK Q+D ++ EDI+ESGRI
Sbjct: 308 FINGKQVFFSDFTEKNKVTKASKSGLPSPNAPAESQAIAKWKQQQDGLRKEEDISESGRI 367
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
F RNL+YT TE+++ KLFE+YGP+ E+ LP+DK T K KGF VT++MPEHA +A+ LD
Sbjct: 368 FFRNLAYTTTEEEMQKLFEQYGPVVEINLPVDKLTRKIKGFGTVTYMMPEHALKAFNALD 427
Query: 400 GTVFLGRMLHLIPGK 414
GT F GR+LHL+PGK
Sbjct: 428 GTDFNGRLLHLLPGK 442
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 127/345 (36%), Gaps = 79/345 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I +NL T +L+ +F ++GP+ ++LP T AL+ F P A QA++ L
Sbjct: 555 ILAKNLPATTVVSELSPIFSRFGPIGRIVLPPSGVT------ALIEFCEPSEARQAFKKL 608
Query: 399 DGTVFLGRMLHL----------------IPGKPKENEGNVD--GKVHCCISERKLD---A 437
+ F L+L I K K+ E K I E D A
Sbjct: 609 AYSKFKNAPLYLEWAPEQTFVTTLSNEPIIRKTKQEEPRRKEPEKTTPAIKEETRDERLA 668
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGIT----G 486
+ E + ++NL ++T+ + F G + V + P+ + G
Sbjct: 669 EDAGDEPEPDTTLFLRNLNFKTVKETVLEHFRHLGSIHTVEIAKRKDPQNPHQFSSLGYG 728
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGE 546
++F + A A +L T P+ L ++S + +NE+ G+
Sbjct: 729 FIQFKNASVADHALKNLQLTHIDGNPVEL------------KRSDRVLRNQNEDVSRRGQ 776
Query: 547 EEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGP 606
+K+ T T + ++N+ F + + FK G
Sbjct: 777 AAQKKQTG--------------------------TKILVRNIPFQAQYREVLEVFKAFGE 810
Query: 607 IASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
+ S+ + +K + G+ G+GFV F T+ +A L S+
Sbjct: 811 LRSLRIPKK---VTAGEDAHRGFGFVDFITKADAKRAFDALSAST 852
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 123/323 (38%), Gaps = 70/323 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
I +NL Y T +++ LFE +G + + +P +T G V ++ A AFN+L
Sbjct: 367 IFFRNLAYTTTEEEMQKLFEQYGPVVEINLPVDKLTRKIKGFGTVTYMMPEHALKAFNAL 426
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
T F L+L GKE +KN++ + ++D
Sbjct: 427 DGTDFNGRLLHL--------------LPGKELDKNDQSQAD----------KDDFGPSFK 462
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E + + ++P TL+ L N+ D + + FK S +
Sbjct: 463 EKKALKLKKNAQKPIGWNTLF---LGANAVADLLAKQFKT----------------SKER 503
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
L G R +L + V IE+K+ LE E + K+
Sbjct: 504 ILDTSEGGSSAAVRLALGETQIV----------IEMKKF---LEEEGVRLSAFDEPSQKR 550
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ + IL +N+P SE+ +F FG + + LP V + +EF +EA++
Sbjct: 551 SRTVILAKNLPATTVVSELSPIFSRFGPIGRIVLPPSGVTA-------LIEFCEPSEARQ 603
Query: 744 AMKALCQSTHLYGRRLVLEWAEE 766
A K L S L LEWA E
Sbjct: 604 AFKKLAYS-KFKNAPLYLEWAPE 625
>gi|432874359|ref|XP_004072458.1| PREDICTED: probable RNA-binding protein 19-like [Oryzias latipes]
Length = 921
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 171/356 (48%), Positives = 228/356 (64%), Gaps = 43/356 (12%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q ARS +ILVKNLP ++L+ LF P G LGRVL+PP G+T ++EFL+
Sbjct: 572 LDSFSQAAAARSTTVILVKNLPAGVTTSELEELFSPHGSLGRVLLPPSGLTAIIEFLEPT 631
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AK AF LAY+KF VPLYLEWAP GVF
Sbjct: 632 EAKRAFTRLAYSKFHHVPLYLEWAPVGVFVA----------------------------- 662
Query: 555 EEDNQQGVPEVEENVEEDEEREPE---------PDTTLYIKNLNFNSTEDSIRRHFKKCG 605
D Q+ V EE V+E ++ E E P +TL+IKNL+F +TE+ ++ F KCG
Sbjct: 663 --DQQKTVSNKEETVKEKKDLEKEEEDEEEDAVPGSTLFIKNLSFITTEEKLQETFSKCG 720
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRN 665
+ ++++KKD G+ LSMGYGFVQ+ + E +AL+ LQ+ S+D+H++ELK S++
Sbjct: 721 KVKFCSISKKKD--KSGKLLSMGYGFVQYQSAEGAQKALRQLQHCSVDDHKLELKISDKA 778
Query: 666 LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 725
+ T+ K+K + KQTGSKILVRN+PFQA E+ ELF FGELK VRLPKK GSG
Sbjct: 779 TRATETSRKKKQAE-KKQTGSKILVRNVPFQATVREIRELFCTFGELKTVRLPKKAAGSG 837
Query: 726 LHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
HRGFGFV+FITK +AK+A ALC STHLYGRRLVLEWA+ + VE +R++T ++
Sbjct: 838 NHRGFGFVDFITKQDAKKAFAALCHSTHLYGRRLVLEWADAEETVEALRRKTAEHY 893
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 114/201 (56%), Gaps = 22/201 (10%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRT------TFLGMAYIGFKDEKNCNKALNKNK 279
T+ ++ +P VK++ +K + PL A++R G Y+ E+ NKAL KNK
Sbjct: 289 TVKLRGVPFSVKEQQIKEFMTPLRPAAIRIGKNESGQRTGYVYVDLHSEEEVNKALKKNK 348
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK----HWKSQEDSVQFAEDIAE 335
+ G+ + ++K D + + ++ K K ++ + + ED++E
Sbjct: 349 DYIGGRYIEVFK------------VDHSGGKAKKDPKDKEPDFNFTRKLKEDEEEEDVSE 396
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+GR+FVRNL YT TE+D+ +LF K+GPL+EV+ PID T K KGFA VT+++PE+A A
Sbjct: 397 TGRLFVRNLPYTCTEEDIRELFSKHGPLSEVLFPIDNLTKKPKGFAFVTYMIPENAVTAL 456
Query: 396 QHLDGTVFLGRMLHLIPGKPK 416
LD VF GRMLHL+P K
Sbjct: 457 AQLDRHVFQGRMLHLLPSTVK 477
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 75/128 (58%), Gaps = 3/128 (2%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GTVTD LK+T +GKFR+F F+G+ E+ A AL +FN ++V +SR+
Sbjct: 13 MKEERFSSMFAAFGTVTDCSLKFTKDGKFRKFGFVGFKSEEDASRALKHFNRSFVDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQD-LKPEHTKDSKPGKKS-KNDPT 146
VE C GD TK K+WSK+ S+ +K AP + K KD+ G + + D
Sbjct: 73 TVEICKAFGDPTKGKAWSKHT-QSAGQEKPSGPAPTEGKKKKNQKKDTAIGLGNLEEDQE 131
Query: 147 FSDFLQLH 154
F +FL +H
Sbjct: 132 FKEFLSVH 139
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 131/328 (39%), Gaps = 64/328 (19%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKALNKNK 279
R I+VKNLPAGV +L+ F P L V G+ A I F + +A +
Sbjct: 582 RSTTVILVKNLPAGVTTSELEELFSPHGSLGRVLLPPSGLTAIIEFLEPTEAKRAFTR-L 640
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR- 338
++ K + +Y + + AD S + K K E + E+ A G
Sbjct: 641 AYSKFHHVPLY---LEWAPVGVFVADQQKTVSNKEETVKEKKDLEKEEEDEEEDAVPGST 697
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NLS+ TE+ L + F K G + I K+ DK + G+ V + E A +
Sbjct: 698 LFIKNLSFITTEEKLQETFSKCGKVK--FCSISKKKDKSGKLLSMGYGFVQYQSAEGAQK 755
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKL-----DAFNQVVEARSKR 448
A + L HC + + KL D + E K+
Sbjct: 756 ALRQLQ---------------------------HCSVDDHKLELKISDKATRATETSRKK 788
Query: 449 ----------IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFL 491
ILV+N+P++ +++ LF FG+L V +P G V+F+
Sbjct: 789 KQAEKKQTGSKILVRNVPFQATVREIRELFCTFGELKTVRLPKKAAGSGNHRGFGFVDFI 848
Query: 492 QKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
K AK AF +L + T L LEWA
Sbjct: 849 TKQDAKKAFAALCHSTHLYGRRLVLEWA 876
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 131/345 (37%), Gaps = 71/345 (20%)
Query: 325 DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVT 384
DS A + I V+NL VT +L +LF +G L V+LP T A++
Sbjct: 573 DSFSQAAAARSTTVILVKNLPAGVTTSELEELFSPHGSLGRVLLPPSGLT------AIIE 626
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHL----IPGKPKENEGNVDGKVHCC--ISERKLDAF 438
FL P A +A+ L + F L+L + + + V K + + +
Sbjct: 627 FLEPTEAKRAFTRLAYSKFHHVPLYLEWAPVGVFVADQQKTVSNKEETVKEKKDLEKEEE 686
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL------------GRVLVPPYGITG 486
++ +A + +KNL + T L+ F G + G++L Y G
Sbjct: 687 DEEEDAVPGSTLFIKNLSFITTEEKLQETFSKCGKVKFCSISKKKDKSGKLLSMGY---G 743
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGE 546
V++ A+ A L + + L L+ + + A E S+ K++ + ++ G
Sbjct: 744 FVQYQSAEGAQKALRQLQHCSVDDHKLELKISDKAT--RATETSRKKKQAEKKQTG---- 797
Query: 547 EEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGP 606
+ + ++N+ F +T IR F G
Sbjct: 798 ----------------------------------SKILVRNVPFQATVREIRELFCTFGE 823
Query: 607 IASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
+ +V + + K+ G G+GFV F T++ +A L +S+
Sbjct: 824 LKTVRLPK----KAAGSGNHRGFGFVDFITKQDAKKAFAALCHST 864
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
+E EP + T+ ++ + F+ E I+ P A++ + + + GQ GY +V
Sbjct: 280 QEMEPATEFTVKLRGVPFSVKEQQIKEFMTPLRP-AAIRIGKNES----GQ--RTGYVYV 332
Query: 633 QFYTRESLNQALK---------VLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSN 679
++ E +N+ALK ++ +D + K+ ++ E + ++ +
Sbjct: 333 DLHSEEEVNKALKKNKDYIGGRYIEVFKVDHSGGKAKKDPKDKEPDFNFTRKLKEDEEEE 392
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
+TG ++ VRN+P+ + ++ ELF G L V P + + +GF FV ++
Sbjct: 393 DVSETG-RLFVRNLPYTCTEEDIRELFSKHGPLSEVLFPIDNL-TKKPKGFAFVTYMIPE 450
Query: 740 EAKRAMKALCQSTHLYGRRLV 760
A A+ L H++ R++
Sbjct: 451 NAVTALAQL--DRHVFQGRML 469
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +F AFG + L K G R FGFV F ++ +A RA+
Sbjct: 2 SRLIVKNLPNGMKEERFSSMFAAFGTVTDCSL--KFTKDGKFRKFGFVGFKSEEDASRAL 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNRS 65
>gi|12835985|dbj|BAB23448.1| unnamed protein product [Mus musculus]
Length = 590
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/352 (51%), Positives = 233/352 (66%), Gaps = 8/352 (2%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +IL KNLP TL +++ F FG LGRVL+P GIT +VEFL+
Sbjct: 209 LDSFSQAAAERSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPL 268
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGK-----EKEKNEEEGEEGEEEK 549
+A+ AF LAY+KF VPLYLEWAP GVF A +K + EK + E+E E +
Sbjct: 269 EARKAFRHLAYSKFHHVPLYLEWAPIGVFGAAPQKKDSQHEQPAEKAEVEQETVLDPEGE 328
Query: 550 KENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIAS 609
K + + G E EE EE+EE E P TL+IKNLNF++TE++++ F K G I S
Sbjct: 329 KASVEGAEASTGKMEEEEEEEEEEEEESIPGCTLFIKNLNFSTTEETLKGVFSKVGAIKS 388
Query: 610 VTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESE 669
T+++KK+ G LSMG+GFV++ E +ALK LQ ++D H++E++ S R +
Sbjct: 389 CTISKKKN--KAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERATKP- 445
Query: 670 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
A T RK KQT SKILVRNIPFQA Q E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 446 ALTSTRKKQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRG 505
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
FGFV+FITK +AK+A ALC STHLYGRRLVLEWA+ V+ +R++T R+F
Sbjct: 506 FGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSEVTVQTLRRKTARHF 557
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
ED+A+SGR+FVRNLSYT +E+DL KLF YGPL+E+ PID T K KGFA VTF+ PEH
Sbjct: 32 EDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEH 91
Query: 391 ATQAYQHLDGTVFLGRMLHLIPG---KPKENEGNVDG 424
A +AY +DG VF GRMLH++P K E N G
Sbjct: 92 AVKAYAEVDGQVFQGRMLHVLPSTIKKEASQEANAPG 128
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 27/193 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL+++ TE+ L +F K G + I K+ +K + GF V + PE A +
Sbjct: 362 LFIKNLNFSTTEETLKGVFSKVGAIKSCT--ISKKKNKAGVLLSMGFGFVEYKKPEQAQK 419
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + L G H + G E + S RK QV + ++ ILV+
Sbjct: 420 ALKQLQG--------HTVDGHKLEVRISERATKPALTSTRK----KQVPKKQTTSKILVR 467
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAY- 505
N+P++ +++ LF FG+L V +P + G V+F+ K AK AFN+L +
Sbjct: 468 NIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHS 527
Query: 506 TKFKEVPLYLEWA 518
T L LEWA
Sbjct: 528 THLYGRRLVLEWA 540
>gi|30794154|ref|NP_083038.1| probable RNA-binding protein 19 [Mus musculus]
gi|73621449|sp|Q8R3C6.1|RBM19_MOUSE RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
gi|19343654|gb|AAH25619.1| RNA binding motif protein 19 [Mus musculus]
gi|21707580|gb|AAH34010.1| RNA binding motif protein 19 [Mus musculus]
gi|148687830|gb|EDL19777.1| RNA binding motif protein 19 [Mus musculus]
Length = 952
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 180/352 (51%), Positives = 233/352 (66%), Gaps = 8/352 (2%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +IL KNLP TL +++ F FG LGRVL+P GIT +VEFL+
Sbjct: 571 LDSFSQAAAERSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPL 630
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGK-----EKEKNEEEGEEGEEEK 549
+A+ AF LAY+KF VPLYLEWAP GVF A +K + EK + E+E E +
Sbjct: 631 EARKAFRHLAYSKFHHVPLYLEWAPIGVFGAAPQKKDSQHEQPAEKAEVEQETVLDPEGE 690
Query: 550 KENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIAS 609
K + + G E EE EE+EE E P TL+IKNLNF++TE++++ F K G I S
Sbjct: 691 KASVEGAEASTGKMEEEEEEEEEEEEESIPGCTLFIKNLNFSTTEETLKGVFSKVGAIKS 750
Query: 610 VTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESE 669
T+++KK+ G LSMG+GFV++ E +ALK LQ ++D H++E++ S R +
Sbjct: 751 CTISKKKN--KAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERATKP- 807
Query: 670 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
A T RK KQT SKILVRNIPFQA Q E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 808 ALTSTRKKQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRG 867
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
FGFV+FITK +AK+A ALC STHLYGRRLVLEWA+ V+ +R++T R+F
Sbjct: 868 FGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSEVTVQTLRRKTARHF 919
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 155/494 (31%), Positives = 234/494 (47%), Gaps = 114/494 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQAAL++F+ +++ ++RI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQAALNHFHRSFIDTTRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD +KP++WSK+A SS ++ P QD P TK K +K K
Sbjct: 73 TVEFCKSFGDPSKPRAWSKHAQKSSQPKQ-----PSQDSVPSDTKKDKKKKGPSDLEKLK 127
Query: 143 NDPTFSDFLQLHGK----------DVSKLLPL---------------SNKD-GEEKEEE- 175
D F +FL +H K + LP SN D G+E EEE
Sbjct: 128 EDAKFQEFLSIHQKRTQVATWANDALEAKLPKAKTKASSDYLNFDSDSNSDSGQESEEEP 187
Query: 176 -NEDESNNQ------IAHADISDMEYLKLK------------------------------ 198
ED Q ++SDM+YLK K
Sbjct: 188 AREDPEEEQGLQPKAAVQKELSDMDYLKSKMVRAEVSSEDEDEEDSEDEAVNCEEGSEEE 247
Query: 199 -------TKSKDTAPSDPSVPPVSKA---------PVHKRQY---HTIVVKNLPAGVKKK 239
+ +K S +VP V + PV +++ +T+ ++ P V +K
Sbjct: 248 EEEGSPASPAKQGGVSRGAVPGVLRPQEAAGKVEKPVSQKEPTTPYTVKLRGAPFNVTEK 307
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ E+ KAL N+ + G+ + +++
Sbjct: 308 NVIEFLAPLKPVAIRIVRNAHGNKTGYVFVDLSSEEEVKKALKCNRDYMGGRYIEVFREK 367
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDL 353
+ +A+ S + + E+ ED+A+SGR+FVRNLSYT +E+DL
Sbjct: 368 QAPTAR-------GPPKSTTPWQGRTLGENEEE----EDLADSGRLFVRNLSYTSSEEDL 416
Query: 354 TKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPG 413
KLF YGPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 417 EKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPS 476
Query: 414 ---KPKENEGNVDG 424
K E N G
Sbjct: 477 TIKKEASQEANAPG 490
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 27/193 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL+++ TE+ L +F K G + I K+ +K + GF V + PE A +
Sbjct: 724 LFIKNLNFSTTEETLKGVFSKVGAIKSCT--ISKKKNKAGVLLSMGFGFVEYKKPEQAQK 781
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + L G H + G E + S RK QV + ++ ILV+
Sbjct: 782 ALKQLQG--------HTVDGHKLEVRISERATKPALTSTRK----KQVPKKQTTSKILVR 829
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAY- 505
N+P++ +++ LF FG+L V +P + G V+F+ K AK AFN+L +
Sbjct: 830 NIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHS 889
Query: 506 TKFKEVPLYLEWA 518
T L LEWA
Sbjct: 890 THLYGRRLVLEWA 902
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 32/201 (15%)
Query: 559 QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
Q+ +VE+ V + +EP T+ ++ FN TE ++ P+A V
Sbjct: 274 QEAAGKVEKPVSQ---KEPTTPYTVKLRGAPFNVTEKNVIEFLAPLKPVAIRIVRNAHGN 330
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSS 678
K+ GY FV + E + +ALK ++ + IE+ R E +A T +
Sbjct: 331 KT-------GYVFVDLSSEEEVKKALKCNRDY-MGGRYIEVFR-----EKQAPTARGPPK 377
Query: 679 NVAKQTG---------------SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG 723
+ G ++ VRN+ + + + ++E+LF A+G L + P +
Sbjct: 378 STTPWQGRTLGENEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSL- 436
Query: 724 SGLHRGFGFVEFITKNEAKRA 744
+ +GF FV F+ A +A
Sbjct: 437 TKKPKGFAFVTFMFPEHAVKA 457
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQAAL 59
>gi|195133350|ref|XP_002011102.1| GI16192 [Drosophila mojavensis]
gi|193907077|gb|EDW05944.1| GI16192 [Drosophila mojavensis]
Length = 919
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 168/351 (47%), Positives = 231/351 (65%), Gaps = 9/351 (2%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+L AF++ + RSK +IL KNLP T DL +F FG +GR+++PP G+T L+EF
Sbjct: 541 RLSAFDEPTQKRSKTVILAKNLPAATEVADLAPIFSKFGPIGRIVLPPSGVTALIEFCDP 600
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
++A+ AF LAY+KFK VPLYLEWAPE F + K + + E E E+ KE
Sbjct: 601 SEARQAFKKLAYSKFKNVPLYLEWAPEDTFTKTLNGEAIIPKTEPKPESEPKMEQAKELE 660
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
E Q+ P+ V ED + EPEP+TT++++NLNF + +I+ HF+ G I ++ +A
Sbjct: 661 LE---QKPKPD---PVAEDADDEPEPNTTIFLRNLNFKTVAQTIQEHFQSLGTIHTIEIA 714
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
++KDP++P Q S+GYGF+QF QALK +Q + +D + +ELKRS+R L+++
Sbjct: 715 KRKDPQNPKQLNSLGYGFIQFKRAAVAAQALKDMQLTKIDGNLVELKRSDRVLKTQDDGA 774
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFGF 732
+R+ KQTG+KILVRNIPFQA EV ++FKAFGEL +RLPKKM G HRGF F
Sbjct: 775 RRRQVAQKKQTGTKILVRNIPFQAHHHEVRDIFKAFGELTSLRLPKKMTPGEDSHRGFCF 834
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWA--EEADNVEDIRKRTNRYF 781
V++ TK +AKRA AL STHLYGRRLVLEWA E+ +VE++RKRT F
Sbjct: 835 VDYTTKADAKRAFDALSASTHLYGRRLVLEWASNEDQQDVEELRKRTAIKF 885
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 182/439 (41%), Positives = 252/439 (57%), Gaps = 49/439 (11%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
+I++++L+ F KGT+TD+QLKYT +GKFR+F F+GY E +AQAA+ +FNNT + +SR
Sbjct: 12 QISEDKLRNIFGTKGTITDLQLKYTPDGKFRQFCFVGYSSEAEAQAAIKHFNNTCIQTSR 71
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSA-YQKLHNIAP---KQDLKPEHT-KDSKPGKKSK 142
++VE C+ LG KP+SWSKYA DS +KL P K + K E T K + K K
Sbjct: 72 VRVEPCAALGSEEKPQSWSKYAKDSKKNLEKLKAAQPVTKKVNEKKEKTNKVDEILAKHK 131
Query: 143 NDPTFSDFLQLHGK-------DVSKLLPLSNKDGEEKEEENEDESNN------------- 182
+DP F +F+Q H K D + +K+ + + EN ++
Sbjct: 132 DDPAFQEFMQAHDKTRALWANDAGIVAAQPDKETVDAQPENNEKVKETSDDDDDDDDDDE 191
Query: 183 ------------QIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKR------QY 224
++A ISDMEY+K K A + PS SK + Q
Sbjct: 192 EEQVEEEEGQPVKLAEKPISDMEYMKSLMAGKAEAEAKPSTESKSKTKGKAKQDKADLQL 251
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPLPLASVR--TTFLGMAYIGFKDEKNCNKALNKNKSFW 282
TI + N+P K+ D+ +FKPL SVR + G Y+GFK E + + + KNKSF
Sbjct: 252 FTIKIHNVPYKAKRSDIIKFFKPLKPYSVRLPSKVHGFCYVGFKTEHDMARGMMKNKSFI 311
Query: 283 KGKQLNIYKYSKDN---SAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
GKQ+ ++ N AK SG A D N+ + N+ AK W+ Q+DS+ E+I+ESGRI
Sbjct: 312 LGKQVFFSDFTDKNRVTKAKKSGEAVDANSNPITNVNAK-WQQQQDSLSHEENISESGRI 370
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
F RNL+YT TE+DL KLFE +GPL EV LP+DK T + KGF VTF+MPEHA +A+ LD
Sbjct: 371 FFRNLAYTTTEEDLQKLFEPFGPLVEVNLPVDKVTRQIKGFGTVTFMMPEHALKAFNALD 430
Query: 400 GTVFLGRMLHLIPGKPKEN 418
GT F GR+LHL+PGK +N
Sbjct: 431 GTDFHGRLLHLLPGKELDN 449
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 138/331 (41%), Gaps = 42/331 (12%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKAL 275
P KR I+ KNLPA + DL F P+ + G+ A I F D +A
Sbjct: 548 PTQKRSKTVILAKNLPAATEVADLAPIFSKFGPIGRIVLPPSGVTALIEFCDPSEARQAF 607
Query: 276 NKNKSFWKGKQLNIY-KYSKDN--SAKYSGAA-------DDNNNASMENIKAKHWKSQED 325
K ++ K K + +Y +++ ++ + +G A + ME K + +
Sbjct: 608 -KKLAYSKFKNVPLYLEWAPEDTFTKTLNGEAIIPKTEPKPESEPKMEQAKELELEQKPK 666
Query: 326 SVQFAEDIAE----SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK--- 378
AED + + IF+RNL++ + + F+ G + + + K+ K
Sbjct: 667 PDPVAEDADDEPEPNTTIFLRNLNFKTVAQTIQEHFQSLGTIHTIEIAKRKDPQNPKQLN 726
Query: 379 --GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
G+ + F A QA + + T G ++ L + + DG ++++K
Sbjct: 727 SLGYGFIQFKRAAVAAQALKDMQLTKIDGNLVELKRSD-RVLKTQDDGARRRQVAQKK-- 783
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG--------LV 488
++ ILV+N+P++ +++ +F+ FG+L + +P G V
Sbjct: 784 --------QTGTKILVRNIPFQAHHHEVRDIFKAFGELTSLRLPKKMTPGEDSHRGFCFV 835
Query: 489 EFLQKNQAKAAFNSL-AYTKFKEVPLYLEWA 518
++ K AK AF++L A T L LEWA
Sbjct: 836 DYTTKADAKRAFDALSASTHLYGRRLVLEWA 866
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 78/195 (40%), Gaps = 25/195 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I + N+ Y D+ K F+ P + V LP K GF V F EH
Sbjct: 254 IKIHNVPYKAKRSDIIKFFKPLKPYS-VRLP-----SKVHGFCYVGFKT-EHDMARGMMK 306
Query: 399 DGTVFLGRMLHLIP-------GKPKENEGNVDGKVHCCIS-----ERKLDAFNQVVEARS 446
+ + LG+ + K K++ VD + + +++ D+ +
Sbjct: 307 NKSFILGKQVFFSDFTDKNRVTKAKKSGEAVDANSNPITNVNAKWQQQQDSLSHEENISE 366
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAF 500
I +NL Y T DL+ LFEPFG L V +P +T G V F+ A AF
Sbjct: 367 SGRIFFRNLAYTTTEEDLQKLFEPFGPLVEVNLPVDKVTRQIKGFGTVTFMMPEHALKAF 426
Query: 501 NSLAYTKFKEVPLYL 515
N+L T F L+L
Sbjct: 427 NALDGTDFHGRLLHL 441
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+I RN+ + + ++++LF+ FG L V LP V + +GFG V F+ A +A
Sbjct: 369 RIFFRNLAYTTTEEDLQKLFEPFGPLVEVNLPVDKVTRQI-KGFGTVTFMMPEHALKAFN 427
Query: 747 ALCQSTHLYGRRLVLEWAEEADNVED 772
AL T +GR L L +E DN ++
Sbjct: 428 AL-DGTDFHGRLLHLLPGKELDNAQE 452
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 651 SLDEHQI--ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKA 708
+L E QI E+K+ LE E + K++ + IL +N+P + +++ +F
Sbjct: 521 ALGETQIVVEMKKF---LEEEGVRLSAFDEPTQKRSKTVILAKNLPAATEVADLAPIFSK 577
Query: 709 FGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
FG + + LP V + +EF +EA++A K L S L LEWA E
Sbjct: 578 FGPIGRIVLPPSGVTA-------LIEFCDPSEARQAFKKLAYS-KFKNVPLYLEWAPE 627
>gi|60098573|emb|CAH65117.1| hypothetical protein RCJMB04_3n1 [Gallus gallus]
Length = 621
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/361 (48%), Positives = 226/361 (62%), Gaps = 34/361 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP T +L+A+F G LGRVL+P GIT +VEFL+
Sbjct: 250 LDSFSQAAGERSKTVILVKNLPATTSTAELEAVFGKHGSLGRVLLPTGGITAIVEFLEPI 309
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AK AF LAY+KF VPLYLEWAP GVF+ S +K+ E +EGEE
Sbjct: 310 EAKQAFTKLAYSKFHSVPLYLEWAPMGVFS-----SPALQKKNVEALEKEGEE------- 357
Query: 555 EEDNQQGVPEVEENVEEDEEREPE--------------PDTTLYIKNLNFNSTEDSIRRH 600
+ VP+ + V+ EE + P TL+IKNLNF +TE +++
Sbjct: 358 -----RLVPDGDTTVKGSEETSAQDEEEDEEEDEEESIPGCTLFIKNLNFTTTEGTLKET 412
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
F K G + S T+++KKD G LSMG+GFV++ ES +AL+ LQ +D H++E+K
Sbjct: 413 FSKVGAVKSCTISKKKD--KAGTLLSMGFGFVEYKKPESAQKALRRLQGCIVDGHKLEVK 470
Query: 661 RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
S R + A RK V KQ SKILVRNIPFQA E+ ELF FGELK VRLPKK
Sbjct: 471 ISERAVRP-AVKSSRKKQMVKKQKTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKK 529
Query: 721 MVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRY 780
M G+G HRGFGFV+F+TK +AK+A ALC STHLYGRRLVLEWA+ + VE +R+RT +
Sbjct: 530 MAGTGSHRGFGFVDFLTKQDAKKAFNALCHSTHLYGRRLVLEWADTEETVEALRRRTADH 589
Query: 781 F 781
F
Sbjct: 590 F 590
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 94/162 (58%), Gaps = 19/162 (11%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ K E KAL + K + G+ + + + NA E + AK
Sbjct: 11 GFIFVDLKSEAEVQKALKRKKEYIGGQYVEVSRC---------------ENAPKETVTAK 55
Query: 319 H----WKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET 374
W+ + + ED++ESGR+FVRNL +T TE+DL K+F KYGPL+E+ PID+ T
Sbjct: 56 TDDQPWQRMKRDDEEEEDLSESGRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLT 115
Query: 375 DKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
K KGFA +T+++PEHA +AY +DG VF GRM+HL+P K
Sbjct: 116 KKPKGFAFITYMIPEHAVKAYAEMDGQVFQGRMMHLLPSTIK 157
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 141/329 (42%), Gaps = 47/329 (14%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYF-KPLPLASVRTTFLGM-AYIGFKDEKNCNKALNKNK 279
R I+VKNLPA +L+A F K L V G+ A + F + +A K
Sbjct: 260 RSKTVILVKNLPATTSTAELEAVFGKHGSLGRVLLPTGGITAIVEFLEPIEAKQAFTK-L 318
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHW---------KSQEDSVQFA 330
++ K + +Y S A N ++E + S+E S Q
Sbjct: 319 AYSKFHSVPLYLEWAPMGVFSSPALQKKNVEALEKEGEERLVPDGDTTVKGSEETSAQDE 378
Query: 331 EDIAE--------SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----T 377
E+ E +F++NL++T TE L + F K G + I K+ DK +
Sbjct: 379 EEDEEEDEEESIPGCTLFIKNLNFTTTEGTLKETFSKVGAVKSCT--ISKKKDKAGTLLS 436
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
GF V + PE A +A + L G + G L + K +E V V S RK
Sbjct: 437 MGFGFVEYKKPESAQKALRRLQGCIVDGHKLEV-----KISERAVRPAVK---SSRK--- 485
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEF 490
Q+V+ + ILV+N+P++ +++ LF FG+L V +P + G V+F
Sbjct: 486 -KQMVKKQKTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDF 544
Query: 491 LQKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
L K AK AFN+L + T L LEWA
Sbjct: 545 LTKQDAKKAFNALCHSTHLYGRRLVLEWA 573
>gi|195396387|ref|XP_002056813.1| GJ16680 [Drosophila virilis]
gi|194146580|gb|EDW62299.1| GJ16680 [Drosophila virilis]
Length = 915
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/351 (48%), Positives = 237/351 (67%), Gaps = 9/351 (2%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+L AF++ + RSK ++LVKNLP T TDL ++F FG +GR+++PP G+T L+E+ +
Sbjct: 538 RLSAFDEPAQKRSKTVLLVKNLPAGTEATDLASIFSKFGPIGRIVLPPSGVTALIEYCEP 597
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
++A+ AF LAY+KFK VPLYLEWAPE F + K + E EE EEEK E
Sbjct: 598 SEARQAFKKLAYSKFKNVPLYLEWAPENTFTKTLSGEAIIPKTEPAVEKEEEEEEKPELK 657
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
E P + V ED + EPEP+TT++++NLNF + ++++ HF++ G + +V +A
Sbjct: 658 IVE------PLKTDAVAEDADDEPEPNTTIFLRNLNFKTVQETVLEHFRQLGTVHTVEIA 711
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
++KDP++P Q S+GYGF+QF QALK +Q + +D + +ELKRS+R L+++
Sbjct: 712 KRKDPQNPRQLNSLGYGFIQFKKASVAAQALKDMQLTQIDGNLVELKRSDRVLKTQDDGA 771
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFGF 732
+R+ KQTG+KILVRNIPFQA EV ++FKAFGEL +RLPKKM G HRGFGF
Sbjct: 772 RRRQVAQKKQTGTKILVRNIPFQAHYREVRDIFKAFGELTSLRLPKKMTPGEDAHRGFGF 831
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWA--EEADNVEDIRKRTNRYF 781
V+F TK +AKRA AL STHLYGRRLVLEWA E+ +V+++RKRT F
Sbjct: 832 VDFTTKADAKRAFDALSASTHLYGRRLVLEWASNEDQQDVDELRKRTAAKF 882
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 176/435 (40%), Positives = 241/435 (55%), Gaps = 53/435 (12%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
+I++++L+ F KGT+TD+QLKYT +GKFR+F F+GY E +AQAA+ +FNNT + +SR
Sbjct: 12 QISEDKLRNIFGTKGTITDLQLKYTPDGKFRQFCFVGYSSEAEAQAAIKHFNNTCIQTSR 71
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQ-KLHNIAPKQDLKPEHTKDSKPGK------K 140
++VE C+ LG KP+SWSKYA DS Q KL P + + KP K K
Sbjct: 72 VRVEPCAALGSEEKPQSWSKYAKDSKKNQDKLRAEQPASETADQKKAKKKPNKVDEILGK 131
Query: 141 SKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHAD------------ 188
K+DP F +FLQ H K + + G + EE D+ A D
Sbjct: 132 HKDDPEFQEFLQAHDKTRTLWANDAGLAGAQSAEEASDDETEAPARDDSGVDADNHDDDD 191
Query: 189 ---------------------ISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTI 227
ISDMEY+K K A P +K + TI
Sbjct: 192 EEEAPEDETDEQQAEKLAEKPISDMEYMKSLMAGKTDA--KPKAKTQTKPDKSNLELFTI 249
Query: 228 VVKNLPAGVKKKDLKAYFKPLPLASVRT--TFLGMAYIGFKDEKNCNKALNKNKSFWKGK 285
+ N+P K++D+ +FKPL SVR G Y+GFK E++ K + KNKSF KGK
Sbjct: 250 KIHNVPYNTKRQDIIKFFKPLKPYSVRLPGKVHGFCYVGFKTERDMAKGMIKNKSFIKGK 309
Query: 286 QLNIYKYSKDN---SAKYSGA---ADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
Q+ ++ N A+ SG A D A+ N K WK Q+DS++ E+I++SGRI
Sbjct: 310 QVFFSDFTAKNKVTKAEKSGKPVDAADQEAAAGGNAK---WKQQQDSLRSEENISDSGRI 366
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
F RNL+YT TE++L +LFE +GP+ EV LP+DK T + KGF VTF+MPEHA +A+ LD
Sbjct: 367 FFRNLAYTTTEEELQQLFEPFGPVVEVNLPVDKVTRQIKGFGTVTFMMPEHALKAFNALD 426
Query: 400 GTVFLGRMLHLIPGK 414
GT F GR+LHL+PGK
Sbjct: 427 GTTFHGRLLHLLPGK 441
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 143/331 (43%), Gaps = 42/331 (12%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKAL 275
P KR ++VKNLPAG + DL + F P+ + G+ A I + + +A
Sbjct: 545 PAQKRSKTVLLVKNLPAGTEATDLASIFSKFGPIGRIVLPPSGVTALIEYCEPSEARQAF 604
Query: 276 NKNKSFWKGKQLNIY-KYSKDN--SAKYSGAA----------DDNNNASMENIKAKHWKS 322
K ++ K K + +Y +++ +N + SG A + +K
Sbjct: 605 -KKLAYSKFKNVPLYLEWAPENTFTKTLSGEAIIPKTEPAVEKEEEEEEKPELKIVEPLK 663
Query: 323 QEDSVQFAEDIAE-SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK--- 378
+ + A+D E + IF+RNL++ ++ + + F + G + V + K+ +
Sbjct: 664 TDAVAEDADDEPEPNTTIFLRNLNFKTVQETVLEHFRQLGTVHTVEIAKRKDPQNPRQLN 723
Query: 379 --GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
G+ + F A QA + + T G ++ L + + DG ++++K
Sbjct: 724 SLGYGFIQFKKASVAAQALKDMQLTQIDGNLVEL-KRSDRVLKTQDDGARRRQVAQKK-- 780
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP--------PYGITGLV 488
++ ILV+N+P++ +++ +F+ FG+L + +P + G V
Sbjct: 781 --------QTGTKILVRNIPFQAHYREVRDIFKAFGELTSLRLPKKMTPGEDAHRGFGFV 832
Query: 489 EFLQKNQAKAAFNSL-AYTKFKEVPLYLEWA 518
+F K AK AF++L A T L LEWA
Sbjct: 833 DFTTKADAKRAFDALSASTHLYGRRLVLEWA 863
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 124/323 (38%), Gaps = 70/323 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
I +NL Y T +L+ LFEPFG + V +P +T G V F+ A AFN+L
Sbjct: 366 IFFRNLAYTTTEEELQQLFEPFGPVVEVNLPVDKVTRQIKGFGTVTFMMPEHALKAFNAL 425
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
T F L+L GKE +K EE E E ++
Sbjct: 426 DGTTFHGRLLHL--------------LPGKELDKPAEETNE----------ELESGLSFK 461
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
+ + + ++P TL+ + N+ + + + FK S
Sbjct: 462 QKKALKLKQNAQKPIGWNTLF---MGANAVAELLAKQFK----------------TSKAH 502
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
L G R +L + V IE+K+ LE E + K+
Sbjct: 503 ILDTDEGGSSAAVRLALGETQIV----------IEMKKF---LEEEGVRLSAFDEPAQKR 549
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ + +LV+N+P + +++ +F FG + + LP V + +E+ +EA++
Sbjct: 550 SKTVLLVKNLPAGTEATDLASIFSKFGPIGRIVLPPSGVTA-------LIEYCEPSEARQ 602
Query: 744 AMKALCQSTHLYGRRLVLEWAEE 766
A K L S L LEWA E
Sbjct: 603 AFKKLAYS-KFKNVPLYLEWAPE 624
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+I RN+ + + E+++LF+ FG + V LP V + +GFG V F+ A +A
Sbjct: 365 RIFFRNLAYTTTEEELQQLFEPFGPVVEVNLPVDKVTRQI-KGFGTVTFMMPEHALKAFN 423
Query: 747 ALCQSTHLYGRRLVLEWAEEAD 768
AL T +GR L L +E D
Sbjct: 424 AL-DGTTFHGRLLHLLPGKELD 444
>gi|392352553|ref|XP_003751242.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 955
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/358 (48%), Positives = 231/358 (64%), Gaps = 19/358 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +IL KNLP TL +L+ +F FG LGRVL+P GIT +VEFL+
Sbjct: 573 LDSFSQAAAERSKTVILAKNLPAGTLAAELQEIFSRFGSLGRVLLPEGGITAIVEFLEPL 632
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY+KF VPLYLEWAP GVF A +K K+ E+ + E ++E
Sbjct: 633 EARKAFRHLAYSKFHHVPLYLEWAPIGVFGAAPQK-----KDSQPEQPAQKAEAEQETVL 687
Query: 555 EEDNQQGVPEVEE-----------NVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK 603
+ ++ + E E EE+EE E P TL+IKNLNFN+TE++++ F +
Sbjct: 688 NPEGEKALVEGAEASMGKMEEEEEEEEEEEEEESIPGCTLFIKNLNFNTTEETLKEVFSR 747
Query: 604 CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN 663
G + S T+++KK G LSMG+GFV++ E +ALK LQ +D H++E++ S
Sbjct: 748 VGAVKSCTISKKKS--KAGVLLSMGFGFVEYKKPEQAQKALKRLQGHIVDGHKLEVRISE 805
Query: 664 RNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG 723
R + A T RK KQT SKILVRNIPFQA Q E+ ELF FGELK VRLPKKM G
Sbjct: 806 RATKP-ALTSTRKKQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTG 864
Query: 724 SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+G HRGFGFV+FITK +AK+A ALC STHLYGRRLVLEWA+ V+ +R++T ++F
Sbjct: 865 TGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSEVTVQALRRKTAKHF 922
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 156/495 (31%), Positives = 237/495 (47%), Gaps = 114/495 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++ + F GT+TD LK+T EGKFR+F FIG+ E++AQAAL++F+ +++ +SRI
Sbjct: 13 MKEDRFRQLFAAFGTLTDCSLKFTKEGKFRKFGFIGFKSEEEAQAALNHFHRSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG-------KKS 141
VE C + GD +KP++WSK+A S ++ P QD P TK K +K
Sbjct: 73 TVEFCKSFGDPSKPRAWSKHAQKPSQPKQ-----PSQDSIPSDTKKDKKKKKVPSDLEKL 127
Query: 142 KNDPTFSDFLQLHGKDV----------------SKLLPL---------SNKD-GEEKEEE 175
K D F +FL +H K +K P SN D G+E EEE
Sbjct: 128 KEDAEFQEFLSIHQKRTQVATWANDALEAELPKAKAKPSSDYLNFDSDSNSDSGQESEEE 187
Query: 176 -----NEDESNNQIAHA---DISDMEYLKLKTKSKDT----------------------- 204
E+E Q A ++SDM+YLK K +
Sbjct: 188 PAGEDGEEEQGLQPKAAVQKELSDMDYLKSKMVRAEVSSEDEDKEDSEDEAVNCEEGSEA 247
Query: 205 -----APSDP-------------SVPPVSKA-----PVHKRQYHT---IVVKNLPAGVKK 238
+P+ P S+ P A P +++ T + ++ P V +
Sbjct: 248 EEEEGSPTCPAQQAGVNRGAVLGSLRPQEAAGKVEKPASQKEPTTPYTVKLRGAPFNVTE 307
Query: 239 KDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKY 292
K++ + PL ++R G ++ E+ KAL N+ + G+ + +++
Sbjct: 308 KNVLEFLAPLKPVAIRIVRNAHGNKTGYVFVDLSSEEEVKKALKCNREYMGGRYIEVFRE 367
Query: 293 SKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ ++A+ GA ++ +H + ED+A+SGR+FVRNLSYT +E+D
Sbjct: 368 KQASAAR--GAPKSSSAPWQGRTLGEHEEE--------EDLADSGRLFVRNLSYTSSEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF YGPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 418 LEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLP 477
Query: 413 GKPKE---NEGNVDG 424
K+ E N G
Sbjct: 478 STIKKEANQEANAPG 492
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F + G + I K+ K + GF V + PE A +
Sbjct: 727 LFIKNLNFNTTEETLKEVFSRVGAVKSCT--ISKKKSKAGVLLSMGFGFVEYKKPEQAQK 784
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + L G H++ G E + S RK QV + ++ ILV+
Sbjct: 785 ALKRLQG--------HIVDGHKLEVRISERATKPALTSTRK----KQVPKKQTTSKILVR 832
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAY- 505
N+P++ +++ LF FG+L V +P + G V+F+ K AK AFN+L +
Sbjct: 833 NIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHS 892
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGK 533
T L LEWA V +A + K
Sbjct: 893 THLYGRRLVLEWADSEVTVQALRRKTAK 920
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 26/185 (14%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
++EP T+ ++ FN TE ++ P+A V K+ GY FV
Sbjct: 287 QKEPTTPYTVKLRGAPFNVTEKNVLEFLAPLKPVAIRIVRNAHGNKT-------GYVFVD 339
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT--------- 684
+ E + +ALK + IE+ R ++ A KSS+ Q
Sbjct: 340 LSSEEEVKKALKC-NREYMGGRYIEVFREK---QASAARGAPKSSSAPWQGRTLGEHEEE 395
Query: 685 -----GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
++ VRN+ + + + ++E+LF A+G L + P + + +GF FV F+
Sbjct: 396 EDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSL-TKKPKGFAFVTFMFPE 454
Query: 740 EAKRA 744
A +A
Sbjct: 455 HAVKA 459
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEDRFRQLFAAFGTLTDCSL--KFTKEGKFRKFGFIGFKSEEEAQAAL 59
>gi|397525018|ref|XP_003832476.1| PREDICTED: probable RNA-binding protein 19 [Pan paniscus]
Length = 961
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/358 (50%), Positives = 234/358 (65%), Gaps = 14/358 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 574 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGITAIVEFLEPL 633
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSK------GKEKEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K + EK+ E E +G
Sbjct: 634 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDG 693
Query: 546 EEEKKENTAEE--DNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK 603
E + EN EE DN E EE EE+EE E P TL+IKNLNF++TE+ ++ F K
Sbjct: 694 ETPEDENPTEEGADNSSAKMEEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSK 753
Query: 604 CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN 663
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S
Sbjct: 754 VGTVKSCSISKKKN--KAGALLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISE 811
Query: 664 RNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG 723
R + A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G
Sbjct: 812 RATKP-AVTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTG 870
Query: 724 SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 871 TGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHF 928
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 227/480 (47%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ A +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 73 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 128
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEENEDES 180
D F +FL +H K S L + G+E EEE E
Sbjct: 129 EDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGARED 188
Query: 181 NNQIA--------HADISDMEYLKLKT--------------------------------- 199
+ A ++SDM+YLK K
Sbjct: 189 LEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSS 248
Query: 200 -----KSKDT--------APSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
+ +D+ P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 249 ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 308
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 309 NVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 366
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQ-EDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ N GA + K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 367 EKNVPTTKGAPKNTT---------KSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA +TF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLP 477
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 45/210 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE A +
Sbjct: 733 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAGALLSMGFGFVEYRKPEQAQK 790
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER V AR K++
Sbjct: 791 ALKQLQGHV-------------------VDGHKLEVRISERATKP--AVTSARKKQVPRK 829
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 830 QTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAK 889
Query: 498 AAFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 890 RAFNALCHSTHLYGRRLVLEWADSEVTLQA 919
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 172/440 (39%), Gaps = 96/440 (21%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAY---- 395
+R + VTE ++ + PL V + I + K G+ V F E QA
Sbjct: 298 LRGAPFNVTEKNVMEFL---APLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNR 354
Query: 396 QHLDGT---VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+++ G VF + + G PK + G++ L + + + V
Sbjct: 355 EYMGGRYIEVFREKNVPTTKGAPKNTTKSWQGRI--------LGENEEEEDLAESGRLFV 406
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYT 506
+NLPY + DL+ LF +G L + P +T + F+ A A++ +
Sbjct: 407 RNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQ 466
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSK--GKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
F+ L++ P + EA E + G K ++E ++ K N+A N
Sbjct: 467 VFQGRMLHV--LPSTIKKEASEDASALGSSSYKKKKEAQD-----KANSASSHNW----- 514
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
TL+ + N+ D+I + + + T ++ D ++ G
Sbjct: 515 ----------------NTLF---MGPNAVADAIAQKY-------NATKSQVFDHETKGSV 548
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
A++V +L E Q+ ++ R L ++ S A+++
Sbjct: 549 ------------------AVRV----ALGETQL-VQEVRRFLIDNGVSLDSFSQAAAERS 585
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ ILV+N+P +E++E F FG L V LP+ + + VEF+ EA++A
Sbjct: 586 KTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGITA-------IVEFLEPLEARKA 638
Query: 745 MKALCQSTHLYGRRLVLEWA 764
+ L S + L LEWA
Sbjct: 639 FRHLAYS-KFHHVPLYLEWA 657
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D+ +QG+P ++ E ++EP T+
Sbjct: 237 DEGSEAEEEDSSATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 296
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 297 KLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 349
Query: 644 LKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-------------- 689
LK + IE+ R E T K N K +IL
Sbjct: 350 LKC-NREYMGGRYIEVFR-----EKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGR 403
Query: 690 --VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
VRN+P+ + + ++E+LF +G L + P + + +GF F+ F+ A +A
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFITFMFPEHAVKA 459
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAQ 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|354466972|ref|XP_003495945.1| PREDICTED: probable RNA-binding protein 19 [Cricetulus griseus]
gi|344237019|gb|EGV93122.1| putative RNA-binding protein 19 [Cricetulus griseus]
Length = 954
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/353 (50%), Positives = 232/353 (65%), Gaps = 9/353 (2%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +IL KNLP TL +L+ +F FG LGRVL+P GIT +VEFL+
Sbjct: 571 LDSFSQAAAERSKTVILAKNLPAGTLAAELQEIFGRFGSLGRVLLPEGGITAIVEFLEPL 630
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEK-----SKGKEKEKNEEEGE-EGEEE 548
+A+ AF LAY+KF VPLYLEWAP GVF +K ++ EK K E E + E E
Sbjct: 631 EARKAFRHLAYSKFHHVPLYLEWAPIGVFGTVPQKKDSQPAQTAEKAKAEPEMVLDPEGE 690
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
K E V E EE EEDEE E P TL+IKNLNF++TE++++ F K G +
Sbjct: 691 KTSGEGAEAPTGKVEEEEEEEEEDEEEESVPGCTLFIKNLNFSTTEETLKEVFSKVGAVK 750
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES 668
S TV++KK G LSMG+GFV++ E +ALK LQ +D H++E++ S R +
Sbjct: 751 SCTVSKKKS--KAGVLLSMGFGFVEYKKPEKAQKALKQLQGHVVDGHKLEVRISERATKP 808
Query: 669 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 728
T ++K + KQT SKILVRNIPFQA Q E+ ELF FGELK VRLPKKM G+G HR
Sbjct: 809 SLTPTRKKQVS-KKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHR 867
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
GFGFV+F+TK +AK+A ALC STHLYGRRLVLEWA+ ++ +R++T R+F
Sbjct: 868 GFGFVDFVTKQDAKKAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTARHF 920
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 17/194 (8%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKN 278
+T+ ++ P V +K++ + PL ++R G ++ E+ KAL N
Sbjct: 293 YTVKLRGAPFNVTEKNVTEFLAPLKPVAIRIVRNAHGNKTGYVFVDLSSEEEVKKALKCN 352
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
+ + G+ + +++ + + +A +S + + E+ ED+A+SGR
Sbjct: 353 REYMGGRYIEVFR-------EKAPSAHGPPKSSTTPWQGRTLGEHEEE----EDLADSGR 401
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVRNLSYT +E+DL KLF YGPL+E+ PID T K KGFA +TF+ PEHA +AY +
Sbjct: 402 LFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYAEV 461
Query: 399 DGTVFLGRMLHLIP 412
DG VF GRMLH++P
Sbjct: 462 DGQVFQGRMLHVLP 475
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 12/135 (8%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQAAL +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQAALSHFNRSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG-------KKS 141
VE C + GD TKP++WSK+A S ++ P QD P TK +K
Sbjct: 73 TVEFCKSFGDPTKPRAWSKHAQKPSKPKQ-----PSQDSSPSDTKKDDKKKKVSSDLEKL 127
Query: 142 KNDPTFSDFLQLHGK 156
K D F +FL +H K
Sbjct: 128 KKDAEFQEFLSIHQK 142
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 41/208 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL+++ TE+ L ++F K G + + K+ K + GF V + PE A +
Sbjct: 725 LFIKNLNFSTTEETLKEVFSKVGAVKSCT--VSKKKSKAGVLLSMGFGFVEYKKPEKAQK 782
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAF------NQVVEARS 446
A + L G V VDG K+ ISER QV + ++
Sbjct: 783 ALKQLQGHV-------------------VDGHKLEVRISERATKPSLTPTRKKQVSKKQT 823
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAA 499
ILV+N+P++ +++ LF FG+L V +P + G V+F+ K AK A
Sbjct: 824 TSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFVTKQDAKKA 883
Query: 500 FNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
FN+L + T L LEWA V +A
Sbjct: 884 FNALCHSTHLYGRRLVLEWADSEVTLQA 911
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQAAL 59
>gi|345790896|ref|XP_543410.3| PREDICTED: probable RNA-binding protein 19 [Canis lupus familiaris]
Length = 970
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 172/363 (47%), Positives = 232/363 (63%), Gaps = 25/363 (6%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 576 LDSFSQAAAERSKTVILVKNLPAGTLVAELQETFGRFGSLGRVLLPEGGITAIVEFLEPL 635
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY+KF PLYLEWAP GVF+ + ++K E + EE++ E
Sbjct: 636 EARKAFRHLAYSKFHHTPLYLEWAPVGVFSSSAPQTK----EPQDPPAGPAEEDRAEPET 691
Query: 555 EEDNQQGVPEVEENVEEDEEREPE----------------PDTTLYIKNLNFNSTEDSIR 598
DN+ PE E+ E E P P TL+IKNLNF++TE++++
Sbjct: 692 VPDNE--TPEGEKPAEGRAEDCPAKVEEEEEEEEEEEESLPGCTLFIKNLNFSTTEETLK 749
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
F K G + S ++++KK+ G+ LSMG+GFV++ E +ALK LQ +D H++E
Sbjct: 750 GVFSKAGMVKSCSISKKKN--KAGELLSMGFGFVEYRKPEQAQKALKQLQGHVVDSHKLE 807
Query: 659 LKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP 718
++ S R + A T RK KQT SKILVRNIPFQA + E++ELF FGELK VRLP
Sbjct: 808 VRISERATKP-ALTSTRKKQVPRKQTTSKILVRNIPFQADKREIQELFSTFGELKTVRLP 866
Query: 719 KKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTN 778
KKM G+G HRGFGFV+F+TK +AKRA +ALC STHLYGRRLVLEWA+ +++ +R++T
Sbjct: 867 KKMTGTGTHRGFGFVDFLTKQDAKRAFQALCHSTHLYGRRLVLEWADSEVSLQALRRKTA 926
Query: 779 RYF 781
+F
Sbjct: 927 EHF 929
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 232/482 (48%), Gaps = 112/482 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++ + F GT+TD LK+T +GKFR+F FIG+ E++A +AL++FN +++ +SRI
Sbjct: 13 MKEDRFRQLFASFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEALSALNHFNRSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKP-EHTKDSKPGK------KS 141
VE C + GD TKP++WSK+A + ++ N + +D P E KD K K K
Sbjct: 73 TVEFCKSFGDPTKPRAWSKHAQKT---KQSKNPSKDKDFVPTEPKKDDKTKKVASELEKL 129
Query: 142 KNDPTFSDFLQLHGK---------DVSKLLPLSNKD--------------GEEKEEEN-- 176
K D F +FL H K D + PL K G+E +EE
Sbjct: 130 KEDTEFQEFLSAHQKRTQTATWANDALDIEPLKGKSKPPASDYLNFDSDSGQESDEEGAG 189
Query: 177 ---EDESNNQIAHA---DISDMEYLKLK-------------------------------- 198
ED+ ++ A ++SDM+YLK K
Sbjct: 190 EDPEDDDGHKPRAAVQKELSDMDYLKSKMVKSESLSSLEEEESEDEAVSCGEESGAEEEA 249
Query: 199 --------------TKSKDTAPSDPSVPPVSKAPVHK-------RQYHTIVVKNLPAGVK 237
+ APS+ +P ++A K +T+ ++ P V
Sbjct: 250 PGAAPTQQDRGKPVAGPEQGAPSENEIPGAARAEADKLANQKEPTTPYTVKLRGAPFNVT 309
Query: 238 KKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYK 291
+K++ + PL ++R G ++ F+ E+ +AL N+ + G+ + I++
Sbjct: 310 EKNVLEFLAPLRPVAIRIVRNAHGNKTGYIFVDFRSEEEIKQALKCNREYMGGRYIEIFR 369
Query: 292 YSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSYTVTE 350
+ K ++N AK W+ + + ED+A+SGR+F+RNL YT TE
Sbjct: 370 EKNVPTTK----------GPLKN-SAKPWQGRTLGENEEEEDLADSGRLFIRNLPYTSTE 418
Query: 351 DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+DL +LF K+GPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF GRMLH+
Sbjct: 419 EDLQRLFSKFGPLSELHYPIDSLTKKPKGFAFVTFIFPEHAVRAYAEVDGQVFQGRMLHV 478
Query: 411 IP 412
+P
Sbjct: 479 LP 480
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 27/201 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL+++ TE+ L +F K G + I K+ +K + GF V + PE A +
Sbjct: 734 LFIKNLNFSTTEETLKGVFSKAGMVKSC--SISKKKNKAGELLSMGFGFVEYRKPEQAQK 791
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + L G H++ E + S RK QV ++ ILV+
Sbjct: 792 ALKQLQG--------HVVDSHKLEVRISERATKPALTSTRK----KQVPRKQTTSKILVR 839
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAY- 505
N+P++ +++ LF FG+L V +P + G V+FL K AK AF +L +
Sbjct: 840 NIPFQADKREIQELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFQALCHS 899
Query: 506 TKFKEVPLYLEWAPEGVFAEA 526
T L LEWA V +A
Sbjct: 900 THLYGRRLVLEWADSEVSLQA 920
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 22/183 (12%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
++EP T+ ++ FN TE ++ P+A V K+ GY FV
Sbjct: 290 QKEPTTPYTVKLRGAPFNVTEKNVLEFLAPLRPVAIRIVRNAHGNKT-------GYIFVD 342
Query: 634 FYTRESLNQALK------------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
F + E + QALK + + ++ + LK S + + + ++A
Sbjct: 343 FRSEEEIKQALKCNREYMGGRYIEIFREKNVPTTKGPLKNSAKPWQGRTLGENEEEEDLA 402
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
++ +RN+P+ + + +++ LF FG L + P + + +GF FV FI A
Sbjct: 403 D--SGRLFIRNLPYTSTEEDLQRLFSKFGPLSELHYPIDSL-TKKPKGFAFVTFIFPEHA 459
Query: 742 KRA 744
RA
Sbjct: 460 VRA 462
>gi|449268059|gb|EMC78930.1| putative RNA-binding protein 19, partial [Columba livia]
Length = 922
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 175/349 (50%), Positives = 228/349 (65%), Gaps = 7/349 (2%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP T +L+ +F G LGRVL+P G+T +VEFL+
Sbjct: 578 LDSFSQAAAERSKTVILVKNLPAGTTVAELEDVFGKHGSLGRVLLPEGGVTAIVEFLELT 637
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AK AF LAY++F VPLYLEWAP GVF K E + E + + + ++
Sbjct: 638 EAKQAFMRLAYSRFHSVPLYLEWAPMGVFVNPTPPKKSPEAPEKEGKAKPVPDPDTDSAV 697
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ + E E+ EE+EE E P TL+IKNLNF +TED++R F K G + S T+++
Sbjct: 698 KGSEEMAAQEEEKEEEEEEEEESIPGCTLFIKNLNFATTEDTLRETFSKVGAVKSCTISK 757
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
KKD G LSMG+GFV++ E +AL+ LQ ++D H++E+K S R L TVK
Sbjct: 758 KKD--KAGALLSMGFGFVEYKKPEGAQKALRRLQGCTVDGHKLEVKISERALRP---TVK 812
Query: 675 --RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
RK V KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRGFGF
Sbjct: 813 SSRKKQTVKKQTTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGF 872
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
V+F+TK +AK+A ALC STHLYGRRLVLEWA+ + VE +R++T +F
Sbjct: 873 VDFLTKQDAKKAFNALCHSTHLYGRRLVLEWADTEETVEALRRKTADHF 921
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 117/194 (60%), Gaps = 17/194 (8%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPL-PLA-----SVRTTFLGMAYIGFKDEKNCNKALNKN 278
HT+ ++ +P+ + ++ ++ +F PL P+A R G ++ K E + +AL +
Sbjct: 299 HTVKLRGVPSNITEQKIREFFLPLKPVAIRIGKKARGKNSGYVFVDLKSEADMQRALKRK 358
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
K + G+ + +++ S N+ K + A +N W+ + ED+AESGR
Sbjct: 359 KEYLGGRCIEVFRCS--NTPKETAPAKPDNQP---------WQRIMRDDEEEEDLAESGR 407
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVRNL +T TE+DL K+F KYGPL+++ PID+ T K KGFA VT+++PEHA +AY L
Sbjct: 408 LFVRNLPFTSTEEDLEKIFSKYGPLSDIHFPIDRLTKKPKGFAFVTYMIPEHAVKAYAEL 467
Query: 399 DGTVFLGRMLHLIP 412
DG VF GRM+HL+P
Sbjct: 468 DGQVFQGRMMHLLP 481
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 81/135 (60%), Gaps = 8/135 (5%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIGY ED+AQ AL++FN +++ +SRI
Sbjct: 13 MKEERFRKLFAAFGTLTDCCLKFTKDGKFRKFGFIGYKSEDEAQMALNHFNRSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG-------KKS 141
VE C GD +KPK+WSK++ + A +K P + P TK K K+
Sbjct: 73 TVELCKAFGDPSKPKAWSKHSQKAPASEKQPE-KPVRSAAPAGTKKDKKKKDPTENLKQL 131
Query: 142 KNDPTFSDFLQLHGK 156
+ D TF +FL +H K
Sbjct: 132 EEDKTFQEFLVVHQK 146
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 92/200 (46%), Gaps = 41/200 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TED L + F K G + I K+ DK + GF V + PE A +
Sbjct: 726 LFIKNLNFATTEDTLRETFSKVGAVKSCT--ISKKKDKAGALLSMGFGFVEYKKPEGAQK 783
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAF------NQVVEARS 446
A + L G VDG K+ ISER L Q V+ ++
Sbjct: 784 ALRRLQGC-------------------TVDGHKLEVKISERALRPTVKSSRKKQTVKKQT 824
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAA 499
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK A
Sbjct: 825 TSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKA 884
Query: 500 FNSLAY-TKFKEVPLYLEWA 518
FN+L + T L LEWA
Sbjct: 885 FNALCHSTHLYGRRLVLEWA 904
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 19/177 (10%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T+ ++ + N TE IR F P+A + + +K K+ GY FV + +
Sbjct: 300 TVKLRGVPSNITEQKIREFFLPLKPVA-IRIGKKARGKN------SGYVFVDLKSEADMQ 352
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATT----------VKRKSSNVAKQTGSKILVR 691
+ALK + L IE+ R + + A ++ ++ VR
Sbjct: 353 RALK-RKKEYLGGRCIEVFRCSNTPKETAPAKPDNQPWQRIMRDDEEEEDLAESGRLFVR 411
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
N+PF + + ++E++F +G L + P + + +GF FV ++ A +A L
Sbjct: 412 NLPFTSTEEDLEKIFSKYGPLSDIHFPIDRL-TKKPKGFAFVTYMIPEHAVKAYAEL 467
>gi|126324467|ref|XP_001378428.1| PREDICTED: probable RNA-binding protein 19 [Monodelphis domestica]
Length = 969
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 171/356 (48%), Positives = 241/356 (67%), Gaps = 14/356 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RS+ +ILVKNLP T P++L+ LF FG LGRVL+P GIT +VE+L+
Sbjct: 560 LDSFSQAAGERSRSVILVKNLPSGTRPSELQELFGRFGSLGRVLLPEGGITAIVEYLEPL 619
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFA-------EAKEKSKGKEKEKNEE--EGEEG 545
+A+ F SLAY+KF +VPLYLEWAP GVF+ E ++ GKE ++E +GE
Sbjct: 620 EARRGFTSLAYSKFHDVPLYLEWAPIGVFSSHPSPKKEQGDEPGGKEATQSEAGPDGETT 679
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
EE +K + + P E++ ++DEE P TL+IKNLNF++TE++++ F K G
Sbjct: 680 EEAEKRAAVAPEKKLDAPSEEDDDDDDEE--GLPGCTLFIKNLNFSTTEETLKEAFSKVG 737
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRN 665
+ + ++++KK+ G LSMG+GFV++ E +ALK LQ +D+H++E++ S R
Sbjct: 738 KVKNCSISKKKN--KAGVSLSMGFGFVEYQKPEQAQKALKQLQGCMVDDHKLEVRISERA 795
Query: 666 LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 725
++ T+ ++K KQ SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G
Sbjct: 796 VKPALTSARQKQV-ARKQRTSKILVRNIPFQANVREIRELFSTFGELKTVRLPKKMTGTG 854
Query: 726 LHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ + V+ +R++T ++F
Sbjct: 855 PHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADTEETVQALRRKTAQHF 910
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 220/467 (47%), Gaps = 98/467 (20%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ ALD+F+ +++ ++R+
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQRALDHFHRSFIDTARV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHN--IAPKQDLKPEHTKDSKPGKKSKNDPT 146
VE C + GD +KP++WSK++ ++ K +AP + K + +K K D
Sbjct: 73 TVEFCKSFGDPSKPRAWSKHSQKTTQPGKPEKSPVAPDTKKDKKKKKATGELEKLKKDAE 132
Query: 147 FSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQI---------------------- 184
F +FL +H K ++ G E ++E +S++ +
Sbjct: 133 FQEFLMVHQKRTQVATWANDTVGVEPKKEKTKKSDDYLNFDSDSGQESEEEIDDEDSESE 192
Query: 185 ----------AHADISDMEYLKLKT----------------------------------- 199
++SDM+YLK K
Sbjct: 193 CACSPAVKAAEQKELSDMDYLKSKVVTADSSEEEEEETSEDEAMACDEEGSDKEEEQPTP 252
Query: 200 --KSKDTAPSDPS-----VPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS 252
+ T P PS V V+ AP +T+ ++ P V +++++ + PL +
Sbjct: 253 GPRGSKTGPKQPSQAQGEVRNVT-APT---TAYTVKLRGAPFNVTEQNVREFLLPLKPMA 308
Query: 253 VRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADD 306
+R G ++ F E + KAL +NK + G+ + +++
Sbjct: 309 IRIVRNAHGNKTGYVFVDFNSEGDVEKALKRNKDYMGGRYIEVFR-----------EKGT 357
Query: 307 NNNASMENIKAKHWKSQEDSVQFAEDI-AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
+ + K W+ +E E+ A+SGR+FVRNL YT TE+DL KLF KYGPL+E
Sbjct: 358 QGTPTHQKGNQKAWQGRELKEDEEEEDLADSGRLFVRNLPYTSTEEDLEKLFAKYGPLSE 417
Query: 366 VILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
V PID T K KGFA +TF+ PEHA +AY +DG +F GRMLHL+P
Sbjct: 418 VHYPIDGLTKKPKGFAFITFMFPEHAVKAYAEVDGQIFQGRMLHLLP 464
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 94/199 (47%), Gaps = 39/199 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL+++ TE+ L + F K G + I K+ +K + GF V + PE A +
Sbjct: 715 LFIKNLNFSTTEETLKEAFSKVGKVKNC--SISKKKNKAGVSLSMGFGFVEYQKPEQAQK 772
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISER----KLDAFNQVVEARSKRI 449
A + L G + D K+ ISER L + Q AR +R
Sbjct: 773 ALKQLQGCMV------------------DDHKLEVRISERAVKPALTSARQKQVARKQRT 814
Query: 450 --ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAF 500
ILV+N+P++ +++ LF FG+L V +P P+ G V+FL K AK AF
Sbjct: 815 SKILVRNIPFQANVREIRELFSTFGELKTVRLPKKMTGTGPHRGFGFVDFLTKQDAKRAF 874
Query: 501 NSLAY-TKFKEVPLYLEWA 518
N+L + T L LEWA
Sbjct: 875 NALCHSTHLYGRRLVLEWA 893
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+RA+
Sbjct: 2 SRLIVKNLPSGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQRAL 59
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 44/229 (19%)
Query: 539 EEEGEEGEEE------KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNS 592
+EEG + EEE + T + Q EV NV P T+ ++ FN
Sbjct: 239 DEEGSDKEEEQPTPGPRGSKTGPKQPSQAQGEVR-NVTA-----PTTAYTVKLRGAPFNV 292
Query: 593 TEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
TE ++R P+A V K+ GY FV F + + +ALK +
Sbjct: 293 TEQNVREFLLPLKPMAIRIVRNAHGNKT-------GYVFVDFNSEGDVEKALK-RNKDYM 344
Query: 653 DEHQIELKRSNRNLESEATTVKRKSSNVAKQT--------------GSKILVRNIPFQAK 698
IE+ R ++ T +K + A Q ++ VRN+P+ +
Sbjct: 345 GGRYIEVFREK---GTQGTPTHQKGNQKAWQGRELKEDEEEEDLADSGRLFVRNLPYTST 401
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLH---RGFGFVEFITKNEAKRA 744
+ ++E+LF +G L V P GL +GF F+ F+ A +A
Sbjct: 402 EEDLEKLFAKYGPLSEVHYPI----DGLTKKPKGFAFITFMFPEHAVKA 446
>gi|344295376|ref|XP_003419388.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
19-like [Loxodonta africana]
Length = 1089
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 169/355 (47%), Positives = 228/355 (64%), Gaps = 16/355 (4%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK ++LVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 574 LDSFSQAAAERSKTVMLVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGITAIVEFLEPL 633
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY+KF VPLYLEWAP GVF+ S +K + + E+ ++ + E
Sbjct: 634 EARKAFRHLAYSKFHHVPLYLEWAPMGVFS-----SSSPQKREPRDTPEDTDKVEPETVP 688
Query: 555 EEDNQQGVPEVEENVEEDEEREPE--------PDTTLYIKNLNFNSTEDSIRRHFKKCGP 606
+ +G VE ++ + E P TL+IKNLNF++TE +++ F K G
Sbjct: 689 GNETPEGEKPVERGEDDSSAKMEEEEEEEESLPGCTLFIKNLNFDTTEATLKEVFSKVGM 748
Query: 607 IASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNL 666
+ S +++RKK+ G LSMG+GFV++ E +AL+ LQ +D H++EL+ S R +
Sbjct: 749 VKSCSISRKKN--KAGALLSMGFGFVEYRKPEHAQKALRQLQGHVVDGHKLELRISERAI 806
Query: 667 ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 726
+ ATT RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK+ G+G
Sbjct: 807 KP-ATTSTRKKQVARKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGA 865
Query: 727 HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ V+ +R++T +F
Sbjct: 866 HRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTVQALRRKTAEHF 920
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 110/195 (56%), Gaps = 18/195 (9%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKN 278
+T+ ++ P V +K++ + PL ++R G ++ F E+ KAL N
Sbjct: 294 YTVKLRGAPFNVTEKNVTEFLAPLKPVAIRIVRNSHGNKTGYIFVDFSSEEEVKKALKCN 353
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESG 337
+ + G+ + +++ +AK G AK W+ + + ED+A+SG
Sbjct: 354 REYMGGRYIEVFREKSSPTAK--GPLKHG---------AKPWQGRTLGENEEEEDLADSG 402
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+FVRNL YT TE++L KLF KYGPL+E+ PID T K KGFA +TF+ PEHA +AY
Sbjct: 403 RLFVRNLPYTSTEEELEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYAE 462
Query: 398 LDGTVFLGRMLHLIP 412
+DG VF GRMLH++P
Sbjct: 463 VDGQVFQGRMLHVLP 477
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 82/136 (60%), Gaps = 14/136 (10%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL++FN +++ +SRI
Sbjct: 13 MKEERFRQLFSSFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAP--KQDLKPEHTKDSKPGK------K 140
VE C + GD T+P++WSK+A QK P K + PE +D+K K K
Sbjct: 73 TVEFCKSFGDPTRPRAWSKHA------QKPSQPKPPSKDPISPETKQDNKKKKVASELEK 126
Query: 141 SKNDPTFSDFLQLHGK 156
K D F +FL +H K
Sbjct: 127 LKGDTEFREFLSVHQK 142
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 139/349 (39%), Gaps = 63/349 (18%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKAL--- 275
+R ++VKNLPAG +L+ F L V G+ A + F + KA
Sbjct: 583 ERSKTVMLVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHL 642
Query: 276 -----NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA 330
+ + + + ++ S + +D + E + E V+
Sbjct: 643 AYSKFHHVPLYLEWAPMGVFSSSSPQKREPRDTPEDTDKVEPETVPGNETPEGEKPVERG 702
Query: 331 EDIAES--------------GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
ED + + +F++NL++ TE L ++F K G + I ++ +K
Sbjct: 703 EDDSSAKMEEEEEEEESLPGCTLFIKNLNFDTTEATLKEVFSKVGMVKSC--SISRKKNK 760
Query: 377 -----TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCIS 431
+ GF V + PEHA +A + L G V G L L IS
Sbjct: 761 AGALLSMGFGFVEYRKPEHAQKALRQLQGHVVDGHKLELR------------------IS 802
Query: 432 ERKLDAFN------QVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP----- 480
ER + QV ++ ILV+N+P++ +++ LF FG+L V +P
Sbjct: 803 ERAIKPATTSTRKKQVARKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTG 862
Query: 481 --PYGITGLVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
+ G V+FL K AK AFN+L + T L LEWA V +A
Sbjct: 863 TGAHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTVQA 911
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 538 NEEEGEEGEEEKKENTAEE--------DNQQGVPEVEENVEEDEEREPEPDT-------- 581
N EEG E E E T + ++ G P +E E +P T
Sbjct: 235 NCEEGSEDEGEASSATPAKPEIERKGAGHEHGAPSGKEQPLEARAETEKPATQKDPTTPY 294
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T+ ++ FN TE ++ P+A V K+ GY FV F + E +
Sbjct: 295 TVKLRGAPFNVTEKNVTEFLAPLKPVAIRIVRNSHGNKT-------GYIFVDFSSEEEVK 347
Query: 642 QALK------------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
+ALK V + S + LK + + + ++A ++
Sbjct: 348 KALKCNREYMGGRYIEVFREKSSPTAKGPLKHGAKPWQGRTLGENEEEEDLADS--GRLF 405
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
VRN+P+ + + E+E+LF +G L + P + + +GF F+ F+ A +A
Sbjct: 406 VRNLPYTSTEEELEKLFSKYGPLSELHYPIDSL-TKKPKGFAFITFMFPEHAVKA 459
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF +FG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFSSFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQTAL 59
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 233/360 (64%), Gaps = 20/360 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP T ++L+ +F G LGRVL+P G+T +VE+L+
Sbjct: 562 LDSFSQAAAERSKSVILVKNLPAGTQASELRDIFSRHGSLGRVLLPEGGVTAIVEYLEPL 621
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF SLAY+KF + PLYLEWAP GVF+ +KE+++ G+E + + E+
Sbjct: 622 EARRAFTSLAYSKFHDAPLYLEWAPMGVFSSPAPL----KKEQDQSGGQEAAQVEAESVT 677
Query: 555 EEDNQQGVPEVEENVEEDEEREPE-------------PDTTLYIKNLNFNSTEDSIRRHF 601
+ Q+ E EN E P TL+IKNLNF++TE+ ++ F
Sbjct: 678 CPEAQRPDGEAAENTPATPEEPNAPAEEEEEEEEESLPGCTLFIKNLNFSTTEEMLKEVF 737
Query: 602 KKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKR 661
K G + S TV++KK+ G LSMG+GFV++ E +ALK LQ S +D H++E+K
Sbjct: 738 SKVGTVKSCTVSKKKN--KAGVLLSMGFGFVEYRKPEQAQKALKQLQGSVVDGHKLEVKI 795
Query: 662 SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM 721
S R ++ T+ +++ + KQ SKILVRNIPFQA + E+ ELF FGELK VRLPKKM
Sbjct: 796 SERAIKPVVTSARQRQT-AHKQKTSKILVRNIPFQANKQEIRELFSTFGELKTVRLPKKM 854
Query: 722 VGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ + V+ +R++T ++F
Sbjct: 855 TGTGPHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADTEETVQALRRKTAQHF 914
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 220/467 (47%), Gaps = 96/467 (20%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ ALD+F+ +++ +SR+
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQNALDHFHRSFIDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGK--KSKNDPT 146
VE C + GD +KP++WSK++ ++ + + + + K G+ K K D
Sbjct: 73 TVEFCKSFGDPSKPRAWSKHSQKATQPRTPEKSPAVSETQKDKKKKKVTGELEKLKKDAE 132
Query: 147 FSDFLQLHGK---------DVSKLLPLSNKDGEEKEEENEDESNNQIA------------ 185
F +FL +H K D ++ P K + + N D + Q +
Sbjct: 133 FQEFLMVHQKRNQVATWANDTVEVEPRKGKVKRDDDYLNFDSDSGQESEEDGEDEDSETE 192
Query: 186 ---------HADISDMEYLKLKT----------------KSKDTAPSDPSV--------- 211
++SDM+YLK K ++ P P
Sbjct: 193 ASSGVKAAEQKELSDMDYLKSKVVRADSSEEEESEDEEACEEEEEPLTPGSGRPQDGGSG 252
Query: 212 ------------PPVSKAPVHK-------RQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS 252
PP SK V K +T+ ++ P V +++++ + PL +
Sbjct: 253 PEEEHTKARGKKPPASKGEVTKPAAQSEPTTAYTVKLRGAPFNVTEQNVREFLVPLKPVA 312
Query: 253 VRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADD 306
+R G ++ F E + KAL NK + G+ + +++ + + D
Sbjct: 313 IRIVRNAHGNKTGYVFVDFSSEGDVEKALKHNKEYMGGRYIEVFR---EKGPRVGPKPQD 369
Query: 307 NNNASMENIKAKHWKSQEDSVQFAE-DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
K W+ +E E D+A+SGR+FVRNL YT TE+DL K+F KYGPL+E
Sbjct: 370 K----------KVWQGRELKEGEEEEDLADSGRLFVRNLPYTSTEEDLEKIFAKYGPLSE 419
Query: 366 VILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
+ PID T K KGFA VT++ PEHA +A+ +DG VF GRMLH++P
Sbjct: 420 IHYPIDGLTKKPKGFAFVTYMFPEHAVKAFAEVDGQVFQGRMLHVLP 466
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 146/353 (41%), Gaps = 83/353 (23%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASV------------RTTFLGMA 261
R I+VKNLPAG + +L+ F LP V R F +A
Sbjct: 572 RSKSVILVKNLPAGTQASELRDIFSRHGSLGRVLLPEGGVTAIVEYLEPLEARRAFTSLA 631
Query: 262 YIGFKDEK-----------NCNKALNKNKSFWKGK---QLNIYKYSKDNSAKYSGAADDN 307
Y F D + L K + G+ Q+ + + + G A +N
Sbjct: 632 YSKFHDAPLYLEWAPMGVFSSPAPLKKEQDQSGGQEAAQVEAESVTCPEAQRPDGEAAEN 691
Query: 308 NNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVI 367
A+ E A + +E+ + +F++NL+++ TE+ L ++F K G +
Sbjct: 692 TPATPEEPNAPAEEEEEEEEESLPGCT----LFIKNLNFSTTEEMLKEVFSKVGTVKSCT 747
Query: 368 LPIDKETDK-----TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNV 422
+ K+ +K + GF V + PE A +A + L G+V V
Sbjct: 748 --VSKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGSV-------------------V 786
Query: 423 DG-KVHCCISERKLDAFNQVVEARSKRI--------ILVKNLPYRTLPTDLKALFEPFGD 473
DG K+ ISER + V AR ++ ILV+N+P++ +++ LF FG+
Sbjct: 787 DGHKLEVKISERAIKPV--VTSARQRQTAHKQKTSKILVRNIPFQANKQEIRELFSTFGE 844
Query: 474 LGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
L V +P P+ G V+FL K AK AFN+L + T L LEWA
Sbjct: 845 LKTVRLPKKMTGTGPHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWA 897
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPSGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQNAL 59
>gi|114647138|ref|XP_522578.2| PREDICTED: probable RNA-binding protein 19 [Pan troglodytes]
gi|410216396|gb|JAA05417.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410216398|gb|JAA05418.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263956|gb|JAA19944.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263958|gb|JAA19945.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292596|gb|JAA24898.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292598|gb|JAA24899.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339181|gb|JAA38537.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339183|gb|JAA38538.1| RNA binding motif protein 19 [Pan troglodytes]
Length = 961
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 180/358 (50%), Positives = 233/358 (65%), Gaps = 14/358 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP T+ +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 574 LDSFSQAAAERSKTVILVKNLPAGTVAAELQETFGRFGSLGRVLLPEGGITAIVEFLEPL 633
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSK------GKEKEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K + EK+ E E +G
Sbjct: 634 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDG 693
Query: 546 EEEKKENTAEE--DNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK 603
E + EN EE DN EE EE+EE E P TL+IKNLNF++TE+ ++ F K
Sbjct: 694 ETPEDENPTEEGADNSSAKMGEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSK 753
Query: 604 CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN 663
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S
Sbjct: 754 VGTVKSCSISKKKN--KAGALLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISE 811
Query: 664 RNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG 723
R + A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G
Sbjct: 812 RATKP-AVTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTG 870
Query: 724 SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 871 TGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHF 928
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 227/480 (47%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ A +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 73 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 128
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEENEDES 180
D F +FL +H K S L + G+E EEE E
Sbjct: 129 EDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGARED 188
Query: 181 NNQIA--------HADISDMEYLKLKT--------------------------------- 199
+ A ++SDM+YLK K
Sbjct: 189 LEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSS 248
Query: 200 -----KSKDT--------APSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
+ +D+ P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 249 ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 308
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 309 NVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 366
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQ-EDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ N GA + K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 367 EKNVPTTKGAPKNTT---------KSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA +TF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLP 477
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 45/210 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE A +
Sbjct: 733 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAGALLSMGFGFVEYRKPEQAQK 790
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER V AR K++
Sbjct: 791 ALKQLQGHV-------------------VDGHKLEVRISERATKP--AVTSARKKQVPRK 829
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 830 QTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAK 889
Query: 498 AAFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 890 RAFNALCHSTHLYGRRLVLEWADSEVTLQA 919
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 172/440 (39%), Gaps = 96/440 (21%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAY---- 395
+R + VTE ++ + PL V + I + K G+ V F E QA
Sbjct: 298 LRGAPFNVTEKNVMEFL---APLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNR 354
Query: 396 QHLDGT---VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+++ G VF + + G PK + G++ L + + + V
Sbjct: 355 EYMGGRYIEVFREKNVPTTKGAPKNTTKSWQGRI--------LGENEEEEDLAESGRLFV 406
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYT 506
+NLPY + DL+ LF +G L + P +T + F+ A A++ +
Sbjct: 407 RNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQ 466
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSK--GKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
F+ L++ P + EA E + G K ++E ++ K N+A N
Sbjct: 467 VFQGRMLHV--LPSTIKKEASEDASALGSSSYKKKKEAQD-----KANSASSHNW----- 514
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
TL+ + N+ D+I + + + T ++ D ++ G
Sbjct: 515 ----------------NTLF---MGPNAVADAIAQKY-------NATKSQVFDHETKGSV 548
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
A++V +L E Q+ ++ R L ++ S A+++
Sbjct: 549 ------------------AVRV----ALGETQL-VQEVRRFLIDNGVSLDSFSQAAAERS 585
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ ILV+N+P +E++E F FG L V LP+ + + VEF+ EA++A
Sbjct: 586 KTVILVKNLPAGTVAAELQETFGRFGSLGRVLLPEGGITA-------IVEFLEPLEARKA 638
Query: 745 MKALCQSTHLYGRRLVLEWA 764
+ L S + L LEWA
Sbjct: 639 FRHLAYS-KFHHVPLYLEWA 657
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D+ +QG+P ++ E ++EP T+
Sbjct: 237 DEGSEAEEEDSSATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 296
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 297 KLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 349
Query: 644 LKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-------------- 689
LK + IE+ R E T K N K +IL
Sbjct: 350 LKC-NREYMGGRYIEVFR-----EKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGR 403
Query: 690 --VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
VRN+P+ + + ++E+LF +G L + P + + +GF F+ F+ A +A
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFITFMFPEHAVKA 459
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAQ 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|148228969|ref|NP_001088073.1| RNA binding motif protein 19 [Xenopus laevis]
gi|52354760|gb|AAH82875.1| LOC494769 protein [Xenopus laevis]
Length = 920
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/347 (50%), Positives = 234/347 (67%), Gaps = 11/347 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP T P +L+ LF FGDLGRVL+P GI+ ++EFL+
Sbjct: 557 LDSFSQAAGPRSKTVILVKNLPAGTKPAELQELFGRFGDLGRVLLPEGGISAVMEFLEPT 616
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AK AF LAYTKF VPLYLEWAP VF + K ++ E+ E +E +
Sbjct: 617 EAKRAFYKLAYTKFHHVPLYLEWAPMDVFTCPPPQKKVEQTEQETSEEQEADAA------ 670
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+Q V E+E +E++E E P TL+IKNLNF+++E++++ F K G + S ++++
Sbjct: 671 --GTKQEVKELEVEEQEEDEEETLPGCTLFIKNLNFSTSEETLKEVFSKVGTVKSCSISK 728
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
KKD G LSMG+GFV++ E +AL+ LQ +D HQ+E+K S R + + AT+++
Sbjct: 729 KKD--KSGSLLSMGFGFVEYMKPEQAQKALRRLQQCMVDGHQVEIKLSERAIRA-ATSME 785
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
RK KQ SKILVRN+PFQA E+ ELF FGELK VRLPKKM G+G HRGFGFV+
Sbjct: 786 RKKQISKKQQSSKILVRNVPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVD 845
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
F+TK +AKRA ALC STHLYGRRLVLEWAE D+VE +R++T ++
Sbjct: 846 FVTKQDAKRAFSALCHSTHLYGRRLVLEWAETEDSVETLRRKTAEHY 892
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 239/484 (49%), Gaps = 106/484 (21%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
I +++ + F GT+TD LKYT +GKFR+F FIG+ E++A+AAL +FN +Y+ +SR+
Sbjct: 13 IKEDRFRELFAAFGTLTDCSLKYTKDGKFRKFGFIGFVSEEEAKAALGHFNKSYIDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPT-- 146
VE C + GD KPK+WSK++ QK + K+ + DS + +KN+ T
Sbjct: 73 SVELCKSFGDPEKPKAWSKHS------QKNDKDSEKKKDSKQTPTDSANSRSTKNNTTAL 126
Query: 147 --------FSDFLQLHGK-------DVSKLLPLSNKDGEEKEE----------------- 174
F +FL +H D + + K + ++
Sbjct: 127 EELEKEDDFKEFLSVHQNRTKTSTWDNDTHVVVEKKQKSQTQDDYLNFDSESEEDNSENE 186
Query: 175 -ENEDE---SNNQIA-HADISDMEYLKLKTKSKDTAPS-----------------DPSVP 212
EN+D S ++A ++ISDMEYLK K +D P+ D +V
Sbjct: 187 VENDDRNSVSTGKLALKSEISDMEYLKSKV-VRDPCPALSEEIVEGEEAEKSSEDDEAVT 245
Query: 213 -PVSKAPVHKRQY--------------------HTIVVKNLPAGVKKKDLKAYF---KPL 248
P S + ++ +T+ ++ P V ++++K + KP+
Sbjct: 246 LPQSTKKIEQQDSKKRKEPMKKKSAVQNEPTTSYTVKLRGAPFNVTEQNVKEFLVPLKPV 305
Query: 249 PLASVRTTF---LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAAD 305
+ R T+ G ++ E+ KAL +NK + G+ + +++ DN K
Sbjct: 306 AIRIARNTYGNKTGYVFVDLSSEEEVQKALKRNKDYMGGRYIEVFR---DNYTK------ 356
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
+ + +++ W+ ++ ED++ESGR+FVRNL Y+ TEDDL KLF KYGP++E
Sbjct: 357 --SPSVQSKAESRPWEQRDKQELQQEDLSESGRLFVRNLPYSCTEDDLDKLFSKYGPISE 414
Query: 366 VILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK-----ENEG 420
+ PID T K KGFA VTFL+ EHA +AY +DG +F GR+LH++P K E+EG
Sbjct: 415 IHFPIDSLTKKPKGFAFVTFLITEHAVKAYAEVDGQIFQGRLLHVLPSAAKKEEVNESEG 474
Query: 421 NVDG 424
+ G
Sbjct: 475 DASG 478
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ ELF AFG L L K G R FGF+ F+++ EAK A+
Sbjct: 2 SRLIVKNLPNGIKEDRFRELFAAFGTLTDCSL--KYTKDGKFRKFGFIGFVSEEEAKAAL 59
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 553 TAEEDNQQGVPEVEENVEEDE--------------EREPEPDTTLYIKNLNFNSTEDSIR 598
++E+D +P+ + +E+ + + EP T+ ++ FN TE +++
Sbjct: 237 SSEDDEAVTLPQSTKKIEQQDSKKRKEPMKKKSAVQNEPTTSYTVKLRGAPFNVTEQNVK 296
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
P+A + +AR + G GY FV + E + +ALK + IE
Sbjct: 297 EFLVPLKPVA-IRIARN----TYGN--KTGYVFVDLSSEEEVQKALK-RNKDYMGGRYIE 348
Query: 659 LKRSNR----NLESEATTV---KRKSSNVAKQTGS---KILVRNIPFQAKQSEVEELFKA 708
+ R N +++S+A + +R + ++ S ++ VRN+P+ + ++++LF
Sbjct: 349 VFRDNYTKSPSVQSKAESRPWEQRDKQELQQEDLSESGRLFVRNLPYSCTEDDLDKLFSK 408
Query: 709 FGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+G + + P + + +GF FV F+ A +A
Sbjct: 409 YGPISEIHFPIDSL-TKKPKGFAFVTFLITEHAVKA 443
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE-TDKTKGFALVTFLMPEHATQ 393
+S +I VRN+ + T ++ +LF +G L V LP T +GF V F+ + A +
Sbjct: 795 QSSKILVRNVPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFVTKQDAKR 854
Query: 394 AYQHLDGTVFL-GRMLHL 410
A+ L + L GR L L
Sbjct: 855 AFSALCHSTHLYGRRLVL 872
>gi|21064855|gb|AAM29657.1| SD14970p [Drosophila melanogaster]
Length = 918
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/354 (46%), Positives = 242/354 (68%), Gaps = 14/354 (3%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+LDAF++ + RS +IL KNLP T +++ +F FG +GR+++PP G+T L+E+
Sbjct: 538 RLDAFDEPAKKRSNTVILAKNLPAATEISEITPIFSRFGPIGRIVLPPSGVTALIEYCDP 597
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE--AKEKSKGKEKEKNEEEGEEGEEEKKE 551
+A+ AF LAY+KFK PLYLEWAPE VF + + E K + K +EE + EE+
Sbjct: 598 LEARQAFKKLAYSKFKNAPLYLEWAPEQVFTKTLSGEPVIPKSEPKPKEEAKP-EEKPIV 656
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
N A+ P+ E++ ED + EPEP+TTL+++NLNF + ++++ +HF+ G I +V
Sbjct: 657 NDAK-------PDEEDSRAEDADDEPEPNTTLFLRNLNFKTVQETVEKHFRHLGSIHTVE 709
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
+A+++DP++P +F S+GYGF+QF ALK LQ + +D + +ELKRS+R L+++
Sbjct: 710 IAKRRDPENPREFKSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVELKRSDRVLKTQDN 769
Query: 672 T-VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK-MVGSGLHRG 729
+R+ ++ KQTG+KILVRNIPFQA+ EV ++FKAFGEL+ +R+PKK G HRG
Sbjct: 770 DGAQRRLASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRG 829
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN--VEDIRKRTNRYF 781
FGFV++++K EAKRA AL STHLYGRRLVLEW+ DN VE++RKRT F
Sbjct: 830 FGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSANDDNQDVEELRKRTAAKF 883
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 253/443 (57%), Gaps = 58/443 (13%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+++L+ F +GT+TD+QLKYT +GKFR+F F+GY E++AQ+A+ +F+NT + +SR+
Sbjct: 13 ITEDKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGYSTEEEAQSAIRHFDNTCIQTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG---------- 138
+VE C+ LG KP+SWSKYA DS + L + K+ K+S+
Sbjct: 73 RVESCAALGSEDKPQSWSKYAKDSK--KNLDKLKEKEREAAAKAKESEKKKKKDKVDKVD 130
Query: 139 ---KKSKNDPTFSDFLQLH-------GKDVS----------------KLLPLSNKDGEEK 172
+ K+DP F +FL+ H G D+ K + G +
Sbjct: 131 QILSRHKDDPEFQEFLEAHDKSRTLWGNDLGINKNREDEEEDDEQQEKSRAARDDSGVDA 190
Query: 173 EEENEDESNN---------QIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQ 223
+ +ED S + ++A ISD+EY+K + T+ + P +KA +
Sbjct: 191 DAGDEDGSGDEADEEEDTDKLAEKPISDLEYMKSLMAT--TSGEATAKKPKAKADKSNLE 248
Query: 224 YHTIVVKNLPAGVKKKDLKAYFKPLPLASVR--TTFLGMAYIGFKDEKNCNKALNKNKSF 281
TI + N+P K++++ +FKPL SVR + G Y+GFK EK+ K + KNKSF
Sbjct: 249 LFTIKIHNVPYNTKRQEVLKFFKPLKPYSVRLPSKVHGFCYVGFKTEKDMAKGMLKNKSF 308
Query: 282 WKGKQLNIYKYSKDNSA-KYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIF 340
KGKQ+ +++ N K S + A+++ AK WK Q+DS+ +DI+ESGRIF
Sbjct: 309 IKGKQVFFSDFTEKNKVTKASKSGQPLAPAAVDAGNAK-WKHQQDSLSKEDDISESGRIF 367
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
RNL+YT TE+DL KLFE++GP+ EV LP+DK T K KGF VT++MPEHA +A+ LDG
Sbjct: 368 FRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNTLDG 427
Query: 401 TVFLGRMLHLIPGK-----PKEN 418
T F GR+LHL+P K PKE+
Sbjct: 428 TDFHGRLLHLLPSKDIEKNPKED 450
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 36/200 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKETDKTKGFALVTF---LMPEH 390
+F+RNL++ ++ + K F G + V + P + K+ G+ + F + EH
Sbjct: 681 LFLRNLNFKTVQETVEKHFRHLGSIHTVEIAKRRDPENPREFKSLGYGFIQFKKSSVAEH 740
Query: 391 ATQAYQ--HLDGT-VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSK 447
A + Q H+DG V L R ++ K ++N+G ++R+L + + +
Sbjct: 741 ALKNLQLTHIDGNPVELKRSDRVL--KTQDNDG----------AQRRLASQKKQTGTK-- 786
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAA 499
ILV+N+P++ +++ +F+ FG+L + +P T G V+++ K +AK A
Sbjct: 787 --ILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFGFVDYMSKAEAKRA 844
Query: 500 FNSL-AYTKFKEVPLYLEWA 518
F++L A T L LEW+
Sbjct: 845 FDALSASTHLYGRRLVLEWS 864
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 121/323 (37%), Gaps = 70/323 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
I +NL Y T DL+ LFE FG + V +P +T G V ++ A AFN+L
Sbjct: 366 IFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNTL 425
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
T F L+L K+ EKN KE+ E D
Sbjct: 426 DGTDFHGRLLHL--------------LPSKDIEKN----------PKEDLDENDASLSFK 461
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E + + ++P TL+ L N+ + + + FK S +
Sbjct: 462 EKKALKLKKNAQKPIGWNTLF---LGANAVAEILAKQFKT----------------SKER 502
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
L G R +L + V IE+KR LE E + K+
Sbjct: 503 ILDTSDGGSSAAVRLALGETQVV----------IEMKRF---LEEEGVRLDAFDEPAKKR 549
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ + IL +N+P + SE+ +F FG + + LP V + +E+ EA++
Sbjct: 550 SNTVILAKNLPAATEISEITPIFSRFGPIGRIVLPPSGVTA-------LIEYCDPLEARQ 602
Query: 744 AMKALCQSTHLYGRRLVLEWAEE 766
A K L S L LEWA E
Sbjct: 603 AFKKLAYS-KFKNAPLYLEWAPE 624
>gi|380818506|gb|AFE81126.1| putative RNA-binding protein 19 [Macaca mulatta]
gi|383412169|gb|AFH29298.1| putative RNA-binding protein 19 [Macaca mulatta]
Length = 960
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/361 (50%), Positives = 234/361 (64%), Gaps = 21/361 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 574 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGITAIVEFLEPL 633
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE------KEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K + EK+E E E +G
Sbjct: 634 EARRAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPLEPAEKDEAEPETVPDG 693
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-----PDTTLYIKNLNFNSTEDSIRRH 600
E + EN EE GV N+EE+EE E E P TL+IKNLNF++TE+ ++
Sbjct: 694 ESPEDENPTEE----GVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKGV 749
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
F K G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++
Sbjct: 750 FSKVGTVKSCSISKKKN--KTGALLSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKLEVR 807
Query: 661 RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
S R + A T RK QT SKILVRNIPFQA E+ ELF FGELK VRLPKK
Sbjct: 808 ISERATKP-AVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKK 866
Query: 721 MVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRY 780
M G+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +
Sbjct: 867 MTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAH 926
Query: 781 F 781
F
Sbjct: 927 F 927
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 151/480 (31%), Positives = 234/480 (48%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 73 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 128
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEEN---- 176
D F +FL +H K S L + G+E EEE
Sbjct: 129 EDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGED 188
Query: 177 -EDESNNQIAHA---DISDMEYLKLK-------------------------TKSKDTA-- 205
E+E+ ++ A ++SDM+YLK K +++++ A
Sbjct: 189 LEEEAGLELKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEAFS 248
Query: 206 -------------------PSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 249 ATPILQERDGKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 308
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 309 NVTEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 366
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ + + A N K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 367 -EKNVPTTNVAPKNTT--------KSWQGRMLGENEEEEDLAESGRLFVRNLPYTSTEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSEVDGQVFQGRMLHVLP 477
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 43/209 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-----KGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I K+ +KT GF V + PE A +
Sbjct: 732 LFIKNLNFDTTEEKLKGVFSKVGTVKSC--SISKKKNKTGALLSMGFGFVEYRKPEQAQK 789
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI---- 449
A + L G H++ G K+ ISER V AR K++
Sbjct: 790 ALKQLQG--------HIVDGH----------KLEVRISERATKP--AVTSARKKQVPRTQ 829
Query: 450 ----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKA 498
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 830 TTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKR 889
Query: 499 AFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 890 AFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 38/233 (16%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D +QG+P ++ E ++EP T+
Sbjct: 237 DEGSEAEEEAFSATPILQERDGKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 296
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 297 KLRGAPFNVTEKNVTEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 349
Query: 644 LK------------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
LK V + ++ + K + ++ + + ++A+ ++ VR
Sbjct: 350 LKCNREYMGGRYIEVFREKNVPTTNVAPKNTTKSWQGRMLGENEEEEDLAES--GRLFVR 407
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
N+P+ + + ++E+LF +G L + P + + +GF FV F+ A +A
Sbjct: 408 NLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFVTFMFPEHAVKA 459
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAL 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|355786561|gb|EHH66744.1| hypothetical protein EGM_03792 [Macaca fascicularis]
Length = 960
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/361 (50%), Positives = 234/361 (64%), Gaps = 21/361 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 574 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGITAIVEFLEPL 633
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE------KEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K + EK+E E E +G
Sbjct: 634 EARRAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPLEPAEKDEAEPETVPDG 693
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-----PDTTLYIKNLNFNSTEDSIRRH 600
E + EN EE GV N+EE+EE E E P TL+IKNLNF++TE+ ++
Sbjct: 694 ESPEDENPTEE----GVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKGV 749
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
F K G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++
Sbjct: 750 FSKVGTVKSCSISKKKN--KTGALLSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKLEVR 807
Query: 661 RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
S R + A T RK QT SKILVRNIPFQA E+ ELF FGELK VRLPKK
Sbjct: 808 ISERATKP-AVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKK 866
Query: 721 MVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRY 780
M G+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +
Sbjct: 867 MTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAH 926
Query: 781 F 781
F
Sbjct: 927 F 927
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 151/480 (31%), Positives = 234/480 (48%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 73 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDKKKKKVAGQLEKLK 128
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEEN---- 176
D F +FL +H K S L + G+E EEE
Sbjct: 129 EDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGED 188
Query: 177 -EDESNNQIAHA---DISDMEYLKLK-------------------------TKSKDTA-- 205
E+E+ ++ A ++SDM+YLK K +++++ A
Sbjct: 189 LEEEAGLELKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEAFS 248
Query: 206 -------------------PSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 249 ATPILQERDGKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 308
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 309 NVTEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 366
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ + + A N K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 367 -EKNVPTTNVAPKNTT--------KSWQGRMLGENEEEEDLAESGRLFVRNLPYTSTEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSEVDGQVFQGRMLHVLP 477
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 43/209 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-----KGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I K+ +KT GF V + PE A +
Sbjct: 732 LFIKNLNFDTTEEKLKGVFSKVGTVKSC--SISKKKNKTGALLSMGFGFVEYRKPEQAQK 789
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI---- 449
A + L G H++ G K+ ISER V AR K++
Sbjct: 790 ALKQLQG--------HIVDGH----------KLEVRISERATKP--AVTSARKKQVPRTQ 829
Query: 450 ----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKA 498
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 830 TTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKR 889
Query: 499 AFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 890 AFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 38/233 (16%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D +QG+P ++ E ++EP T+
Sbjct: 237 DEGSEAEEEAFSATPILQERDGKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 296
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 297 KLRGAPFNVTEKNVTEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 349
Query: 644 LK------------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
LK V + ++ + K + ++ + + ++A+ ++ VR
Sbjct: 350 LKCNREYMGGRYIEVFREKNVPTTNVAPKNTTKSWQGRMLGENEEEEDLAES--GRLFVR 407
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
N+P+ + + ++E+LF +G L + P + + +GF FV F+ A +A
Sbjct: 408 NLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFVTFMFPEHAVKA 459
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAL 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|355564713|gb|EHH21213.1| hypothetical protein EGK_04225 [Macaca mulatta]
Length = 960
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/361 (50%), Positives = 234/361 (64%), Gaps = 21/361 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 574 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGITAIVEFLEPL 633
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE------KEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K + EK+E E E +G
Sbjct: 634 EARRAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPLEPAEKDEAEPEAVPDG 693
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-----PDTTLYIKNLNFNSTEDSIRRH 600
E + EN EE GV N+EE+EE E E P TL+IKNLNF++TE+ ++
Sbjct: 694 ESPEDENPTEE----GVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKGV 749
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
F K G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++
Sbjct: 750 FSKVGTVKSCSISKKKN--KTGALLSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKLEVR 807
Query: 661 RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
S R + A T RK QT SKILVRNIPFQA E+ ELF FGELK VRLPKK
Sbjct: 808 ISERATKP-AVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKK 866
Query: 721 MVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRY 780
M G+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +
Sbjct: 867 MTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAH 926
Query: 781 F 781
F
Sbjct: 927 F 927
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 151/480 (31%), Positives = 234/480 (48%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 73 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 128
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEEN---- 176
D F +FL +H K S L + G+E EEE
Sbjct: 129 EDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGED 188
Query: 177 -EDESNNQIAHA---DISDMEYLKLK-------------------------TKSKDTA-- 205
E+E+ ++ A ++SDM+YLK K +++++ A
Sbjct: 189 LEEEAGLELKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEAFS 248
Query: 206 -------------------PSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 249 ATPILQERDGKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 308
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 309 NVTEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 366
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ + + A N K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 367 -EKNVPTTNVAPKNTT--------KSWQGRMLGENEEEEDLAESGRLFVRNLPYTSTEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSEVDGQVFQGRMLHVLP 477
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 43/209 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-----KGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I K+ +KT GF V + PE A +
Sbjct: 732 LFIKNLNFDTTEEKLKGVFSKVGTVKSC--SISKKKNKTGALLSMGFGFVEYRKPEQAQK 789
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI---- 449
A + L G H++ G K+ ISER V AR K++
Sbjct: 790 ALKQLQG--------HIVDGH----------KLEVRISERATKP--AVTSARKKQVPRTQ 829
Query: 450 ----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKA 498
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 830 TTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKR 889
Query: 499 AFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 890 AFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 38/233 (16%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D +QG+P ++ E ++EP T+
Sbjct: 237 DEGSEAEEEAFSATPILQERDGKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 296
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 297 KLRGAPFNVTEKNVTEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 349
Query: 644 LK------------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
LK V + ++ + K + ++ + + ++A+ ++ VR
Sbjct: 350 LKCNREYMGGRYIEVFREKNVPTTNVAPKNTTKSWQGRMLGENEEEEDLAES--GRLFVR 407
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
N+P+ + + ++E+LF +G L + P + + +GF FV F+ A +A
Sbjct: 408 NLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFVTFMFPEHAVKA 459
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAL 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|402887773|ref|XP_003907256.1| PREDICTED: probable RNA-binding protein 19 [Papio anubis]
Length = 998
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/361 (50%), Positives = 234/361 (64%), Gaps = 21/361 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 612 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGITAIVEFLEPL 671
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE------KEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K + EK+E E E +G
Sbjct: 672 EARRAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPLEPAEKDEAEPETVPDG 731
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-----PDTTLYIKNLNFNSTEDSIRRH 600
E + EN EE GV N+EE+EE E E P TL+IKNLNF++TE+ ++
Sbjct: 732 ESPEGENPTEE----GVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKGV 787
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
F K G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++
Sbjct: 788 FSKVGTVKSCSISKKKN--KTGALLSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKLEVR 845
Query: 661 RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
S R + A T RK QT SKILVRNIPFQA E+ ELF FGELK VRLPKK
Sbjct: 846 ISERATKP-AVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKK 904
Query: 721 MVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRY 780
M G+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +
Sbjct: 905 MTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAH 964
Query: 781 F 781
F
Sbjct: 965 F 965
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 228/480 (47%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL +F+ +++ +SRI
Sbjct: 51 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKHFHKSFIDTSRI 110
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 111 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 166
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEEN---- 176
D F +FL +H K S L + G+E EEE
Sbjct: 167 EDTEFQEFLSVHQRRAQAATWANDGLDAESSKGKSKPASDYLNFDSDSGQESEEEGAGED 226
Query: 177 -EDESNNQIAHA---DISDMEYLKLK---------------------------------- 198
E+E+ ++ A ++SDM+YLK K
Sbjct: 227 LEEEAGLELKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEASS 286
Query: 199 ------------TKSKDTAPSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
+ P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 287 ATPILQERDGKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 346
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 347 NVTEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 404
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ + + A N K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 405 -EKNIPTTNVAPKNTT--------KSWQGRMLGENEEEEDLAESGRLFVRNLPYTSTEED 455
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA VTF+ PEH +AY +DG VF GRMLH++P
Sbjct: 456 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHGVKAYSEVDGQVFQGRMLHVLP 515
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 43/209 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-----KGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I K+ +KT GF V + PE A +
Sbjct: 770 LFIKNLNFDTTEEKLKGVFSKVGTVKSC--SISKKKNKTGALLSMGFGFVEYRKPEQAQK 827
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI---- 449
A + L G H++ G K+ ISER V AR K++
Sbjct: 828 ALKQLQG--------HIVDGH----------KLEVRISERATKP--AVTSARKKQVPRTQ 867
Query: 450 ----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKA 498
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 868 TTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKR 927
Query: 499 AFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 928 AFNALCHSTHLYGRRLVLEWADSEVTLQA 956
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A+
Sbjct: 40 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAL 97
Query: 746 KALCQS 751
K +S
Sbjct: 98 KHFHKS 103
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 38/225 (16%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D +QG+P ++ E ++EP T+
Sbjct: 275 DEGSEAEEEASSATPILQERDGKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 334
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 335 KLRGAPFNVTEKNVTEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 387
Query: 644 LK------------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
LK V + ++ + K + ++ + + ++A+ ++ VR
Sbjct: 388 LKCNREYMGGRYIEVFREKNIPTTNVAPKNTTKSWQGRMLGENEEEEDLAES--GRLFVR 445
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
N+P+ + + ++E+LF +G L + P + + +GF FV F+
Sbjct: 446 NLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFVTFM 489
>gi|158256324|dbj|BAF84133.1| unnamed protein product [Homo sapiens]
gi|189054403|dbj|BAG37176.1| unnamed protein product [Homo sapiens]
Length = 960
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 178/357 (49%), Positives = 233/357 (65%), Gaps = 13/357 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 574 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGHFGSLGRVLLPEGGITAIVEFLEPL 633
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSK------GKEKEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ + K + EK+ E E +G
Sbjct: 634 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSSTAPQKKKLQDTPSEPMEKDPAEPETVPDG 693
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKC 604
E + EN EE ++EE EE+EE E P TL+IKNLNF++TE+ ++ F K
Sbjct: 694 ETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKV 753
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 754 GTVKSCSISKKKN--KAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 811
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T+ RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+
Sbjct: 812 ATKP-AVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGT 870
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHF 927
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 227/480 (47%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ A +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 73 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 128
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEENEDES 180
D F +FL +H K S L + G+E EEE E
Sbjct: 129 EDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGED 188
Query: 181 NNQIA--------HADISDMEYLKLKT--------------------------------- 199
+ A ++SDM+YLK K
Sbjct: 189 LEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSS 248
Query: 200 -----KSKDT--------APSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
+ +D+ P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 249 ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 308
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 309 NVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 366
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQ-EDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ N GA + K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 367 EKNVPTTKGAPKNTT---------KSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA +TF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLP 477
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 45/210 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE A +
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAGVLLSMGFGFVEYRKPEQAQK 789
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER V AR K++
Sbjct: 790 ALKQLQGHV-------------------VDGHKLEVRISERATKP--AVTLARKKQVPRK 828
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 829 QTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAK 888
Query: 498 AAFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 889 RAFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D+ +QG+P ++ E ++EP T+
Sbjct: 237 DEGSEAEEEDSSATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 296
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 297 KLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 349
Query: 644 LKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-------------- 689
LK + IE+ R E T K N K +IL
Sbjct: 350 LKC-NREYMGGRYIEVFR-----EKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGR 403
Query: 690 --VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
VRN+P+ + + ++E+LF +G L + P + + +GF F+ F+ A +A
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFITFMFPEHAVKA 459
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 172/440 (39%), Gaps = 96/440 (21%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAY---- 395
+R + VTE ++ + PL V + I + K G+ V F E QA
Sbjct: 298 LRGAPFNVTEKNVMEFL---APLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNR 354
Query: 396 QHLDGT---VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+++ G VF + + G PK + G++ L + + + V
Sbjct: 355 EYMGGRYIEVFREKNVPTTKGAPKNTTKSWQGRI--------LGENEEEEDLAESGRLFV 406
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYT 506
+NLPY + DL+ LF +G L + P +T + F+ A A++ +
Sbjct: 407 RNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQ 466
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSK--GKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
F+ L++ P + EA E + G K ++E ++ K N+A N
Sbjct: 467 VFQGRMLHV--LPSTIKKEASEDASALGSSSYKKKKEAQD-----KANSASSHNW----- 514
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
TL+ + N+ D+I + + + T ++ D ++ G
Sbjct: 515 ----------------NTLF---MGPNAVADAIAQKY-------NATKSQVFDHETKGSV 548
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
A++V +L E Q+ ++ R L ++ S A+++
Sbjct: 549 ------------------AVRV----ALGETQL-VQEVRRFLIDNGVSLDSFSQAAAERS 585
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ ILV+N+P +E++E F FG L V LP+ + + VEF+ EA++A
Sbjct: 586 KTVILVKNLPAGTLAAELQETFGHFGSLGRVLLPEGGITA-------IVEFLEPLEARKA 638
Query: 745 MKALCQSTHLYGRRLVLEWA 764
+ L S + L LEWA
Sbjct: 639 FRHLAYS-KFHHVPLYLEWA 657
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAQ 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|24661759|ref|NP_648337.1| CG3335 [Drosophila melanogaster]
gi|7294907|gb|AAF50237.1| CG3335 [Drosophila melanogaster]
Length = 918
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/352 (46%), Positives = 239/352 (67%), Gaps = 10/352 (2%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+LDAF++ + RS +IL KNLP T +++ +F FG +GR+++PP G+T L+E+
Sbjct: 538 RLDAFDEPAKKRSNTVILAKNLPAATEISEITPIFSRFGPIGRIVLPPSGVTALIEYCDP 597
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+A+ AF LAY+KFK PLYLEWAPE VF K+ E + E + EE K E
Sbjct: 598 LEARQAFKKLAYSKFKNAPLYLEWAPEQVFT----KTLSGEPVIPKSEPKPKEEVKPEEK 653
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
++ + P+ E++ ED + EPEP+TTL+++NLNF + ++++ +HF+ G I +V +A
Sbjct: 654 PIVNDAK--PDEEDSRAEDADDEPEPNTTLFLRNLNFKTVQETVEKHFRHLGSIHTVEIA 711
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT- 672
+++DP++P +F S+GYGF+QF ALK LQ + +D + +ELKRS+R L+++
Sbjct: 712 KRRDPENPREFKSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVELKRSDRVLKTQDNDG 771
Query: 673 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK-MVGSGLHRGFG 731
+R+ ++ KQTG+KILVRNIPFQA+ EV ++FKAFGEL+ +R+PKK G HRGFG
Sbjct: 772 AQRRLASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFG 831
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN--VEDIRKRTNRYF 781
FV++++K EAKRA AL STHLYGRRLVLEW+ DN VE++RKRT F
Sbjct: 832 FVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSANDDNQDVEELRKRTAAKF 883
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 171/445 (38%), Positives = 253/445 (56%), Gaps = 62/445 (13%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+++L+ F +GT+TD+QLKYT +GKFR+F F+GY E++AQ+A+ +F+NT + +SR+
Sbjct: 13 ITEDKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGYSTEEEAQSAIRHFDNTCIQTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG---------- 138
+VE C+ LG KP+SWSKYA DS + L + K+ K+S+
Sbjct: 73 RVESCAALGSEDKPQSWSKYAKDSK--KNLDKLKEKEREAAAKAKESEKKKKKDKVDKVD 130
Query: 139 ---KKSKNDPTFSDFLQLHGKDVSKLL-------------------------PLSNKDGE 170
+ K+DP F +FL+ H D S+ L + G
Sbjct: 131 QILSRHKDDPEFQEFLEAH--DKSRTLWGNDLGINKNRENEEEDDEEQEESRAARDDSGV 188
Query: 171 EKEEENEDESNN---------QIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHK 221
+ + +ED S + ++A ISD+EY+K + T+ + P +KA
Sbjct: 189 DADAGDEDGSGDEADEEEDTDKLAEKPISDLEYMKSLMAT--TSGEATAKKPKAKADKSN 246
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVR--TTFLGMAYIGFKDEKNCNKALNKNK 279
+ TI + N+P K++++ +FKPL SVR + G Y+GFK EK+ K + KNK
Sbjct: 247 LELFTIKIHNVPYNTKRQEVLKFFKPLKPYSVRLPSKVHGFCYVGFKTEKDMAKGMLKNK 306
Query: 280 SFWKGKQLNIYKYSKDNSA-KYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
SF KGKQ+ +++ N K S + A+++ AK WK Q+DS+ +DI+ESGR
Sbjct: 307 SFIKGKQVFFSDFTEKNKVTKASKSGQPLAPAAVDAGNAK-WKHQQDSLSKEDDISESGR 365
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IF RNL+YT TE+DL KLFE++GP+ EV LP+DK T K KGF VT++MPEHA +A+ L
Sbjct: 366 IFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNTL 425
Query: 399 DGTVFLGRMLHLIPGK-----PKEN 418
DGT F GR+LHL+P K PKE+
Sbjct: 426 DGTDFHGRLLHLLPSKDIEKNPKED 450
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 36/200 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKETDKTKGFALVTF---LMPEH 390
+F+RNL++ ++ + K F G + V + P + K+ G+ + F + EH
Sbjct: 681 LFLRNLNFKTVQETVEKHFRHLGSIHTVEIAKRRDPENPREFKSLGYGFIQFKKSSVAEH 740
Query: 391 ATQAYQ--HLDGT-VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSK 447
A + Q H+DG V L R ++ K ++N+G ++R+L + + +
Sbjct: 741 ALKNLQLTHIDGNPVELKRSDRVL--KTQDNDG----------AQRRLASQKKQTGTK-- 786
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAA 499
ILV+N+P++ +++ +F+ FG+L + +P T G V+++ K +AK A
Sbjct: 787 --ILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFGFVDYMSKAEAKRA 844
Query: 500 FNSL-AYTKFKEVPLYLEWA 518
F++L A T L LEW+
Sbjct: 845 FDALSASTHLYGRRLVLEWS 864
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 121/323 (37%), Gaps = 70/323 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
I +NL Y T DL+ LFE FG + V +P +T G V ++ A AFN+L
Sbjct: 366 IFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNTL 425
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
T F L+L K+ EKN KE+ E D
Sbjct: 426 DGTDFHGRLLHL--------------LPSKDIEKN----------PKEDLDENDASLSFK 461
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E + + ++P TL+ L N+ + + + FK S +
Sbjct: 462 EKKALKLKKNAQKPIGWNTLF---LGANAVAEILAKQFKT----------------SKER 502
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
L G R +L + V IE+KR LE E + K+
Sbjct: 503 ILDTSDGGSSAAVRLALGETQVV----------IEMKRF---LEEEGVRLDAFDEPAKKR 549
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ + IL +N+P + SE+ +F FG + + LP V + +E+ EA++
Sbjct: 550 SNTVILAKNLPAATEISEITPIFSRFGPIGRIVLPPSGVTA-------LIEYCDPLEARQ 602
Query: 744 AMKALCQSTHLYGRRLVLEWAEE 766
A K L S L LEWA E
Sbjct: 603 AFKKLAYS-KFKNAPLYLEWAPE 624
>gi|109098882|ref|XP_001106082.1| PREDICTED: probable RNA-binding protein 19 [Macaca mulatta]
Length = 998
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 181/361 (50%), Positives = 233/361 (64%), Gaps = 21/361 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 612 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGITAIVEFLEPL 671
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE------KEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K + EK+E E E +G
Sbjct: 672 EARRAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPLEPAEKDEAEPETVPDG 731
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-----PDTTLYIKNLNFNSTEDSIRRH 600
E + EN EE GV N+EE+EE E E P TL+IKNLNF++TE+ ++
Sbjct: 732 ESPEDENPTEE----GVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKGV 787
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
F K G + S ++++KK+ G LSMG GFV++ E +ALK LQ +D H++E++
Sbjct: 788 FSKVGTVKSCSISKKKN--KTGALLSMGVGFVEYRKPEQAQKALKQLQGHIVDGHKLEVR 845
Query: 661 RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
S R + A T RK QT SKILVRNIPFQA E+ ELF FGELK VRLPKK
Sbjct: 846 ISERATKP-AVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKK 904
Query: 721 MVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRY 780
M G+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +
Sbjct: 905 MTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAH 964
Query: 781 F 781
F
Sbjct: 965 F 965
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 151/480 (31%), Positives = 234/480 (48%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL +FN +++ +SRI
Sbjct: 51 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKHFNKSFIDTSRI 110
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 111 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 166
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEEN---- 176
D F +FL +H K S L + G+E EEE
Sbjct: 167 EDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGED 226
Query: 177 -EDESNNQIAHA---DISDMEYLKLK-------------------------TKSKDTA-- 205
E+E+ ++ A ++SDM+YLK K +++++ A
Sbjct: 227 LEEEAGLELKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEAFS 286
Query: 206 -------------------PSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 287 ATPILQERDGKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 346
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 347 NVTEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 404
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ + + A N K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 405 -EKNVPTTNVAPKNTT--------KSWQGRMLGENEEEEDLAESGRLFVRNLPYTSTEED 455
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 456 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSEVDGQVFQGRMLHVLP 515
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 43/209 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-----KGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I K+ +KT G V + PE A +
Sbjct: 770 LFIKNLNFDTTEEKLKGVFSKVGTVKSC--SISKKKNKTGALLSMGVGFVEYRKPEQAQK 827
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI---- 449
A + L G H++ G K+ ISER V AR K++
Sbjct: 828 ALKQLQG--------HIVDGH----------KLEVRISERATKP--AVTSARKKQVPRTQ 867
Query: 450 ----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKA 498
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 868 TTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKR 927
Query: 499 AFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 928 AFNALCHSTHLYGRRLVLEWADSEVTLQA 956
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 38/233 (16%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D +QG+P ++ E ++EP T+
Sbjct: 275 DEGSEAEEEAFSATPILQERDGKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 334
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 335 KLRGAPFNVTEKNVTEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 387
Query: 644 LK------------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
LK V + ++ + K + ++ + + ++A+ ++ VR
Sbjct: 388 LKCNREYMGGRYIEVFREKNVPTTNVAPKNTTKSWQGRMLGENEEEEDLAES--GRLFVR 445
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
N+P+ + + ++E+LF +G L + P + + +GF FV F+ A +A
Sbjct: 446 NLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFVTFMFPEHAVKA 497
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 681 AKQTG----SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
+KQ G S+++V+N+P K+ +LF AFG L L K G R FGF+ F
Sbjct: 31 SKQRGLCAMSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFK 88
Query: 737 TKNEAKRAMKALCQS 751
++ EA++A+K +S
Sbjct: 89 SEEEAQKALKHFNKS 103
>gi|5912081|emb|CAB55987.1| hypothetical protein [Homo sapiens]
Length = 960
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/357 (49%), Positives = 233/357 (65%), Gaps = 13/357 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 574 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGHFGSLGRVLLPEGGITAIVEFLEPL 633
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSK------GKEKEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ + K + EK+ E E +G
Sbjct: 634 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSSTAPQKKKLQDTPSEPMEKDPAEPETVPDG 693
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKC 604
E + EN EE ++EE EE+EE E P TL+IKNLNF++TE+ ++ F K
Sbjct: 694 ETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKV 753
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 754 GTVKSCSISKKKN--KAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 811
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T+ RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+
Sbjct: 812 ATKP-AVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGT 870
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRQKTAAHF 927
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 227/480 (47%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ A +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 73 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 128
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEENEDES 180
D F +FL +H K S L + G+E EEE E
Sbjct: 129 EDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGED 188
Query: 181 NNQIA--------HADISDMEYLKLKT--------------------------------- 199
+ A ++SDM+YLK K
Sbjct: 189 LEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSS 248
Query: 200 -----KSKDT--------APSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
+ +D+ P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 249 ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 308
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 309 NVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 366
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQ-EDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ N GA + K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 367 EKNVPTTKGAPKNTT---------KSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA +TF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLP 477
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 45/210 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE A +
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAGVLLSMGFGFVEYRKPEQAQK 789
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER V AR K++
Sbjct: 790 ALKQLQGHV-------------------VDGHKLEVRISERATKP--AVTLARKKQVPRK 828
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 829 QTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAK 888
Query: 498 AAFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 889 RAFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 172/440 (39%), Gaps = 96/440 (21%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAY---- 395
+R + VTE ++ + PL V + I + K G+ V F E QA
Sbjct: 298 LRGAPFNVTEKNVMEFL---APLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNR 354
Query: 396 QHLDGT---VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+++ G VF + + G PK + G++ L + + + V
Sbjct: 355 EYMGGRYIEVFREKNVPTTKGAPKNTTKSWQGRI--------LGENEEEEDLAESGRLFV 406
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYT 506
+NLPY + DL+ LF +G L + P +T + F+ A A++ +
Sbjct: 407 RNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQ 466
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSK--GKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
F+ L++ P + EA E + G K ++E ++ K N+A N
Sbjct: 467 VFQGRMLHV--LPSTIKKEASEDASALGSSSYKKKKEAQD-----KANSASSHNW----- 514
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
TL+ + N+ D+I + + + T ++ D ++ G
Sbjct: 515 ----------------NTLF---MGPNAVADAIAQKY-------NATKSQVFDHETKGSV 548
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
A++V +L E Q+ ++ R L ++ S A+++
Sbjct: 549 ------------------AVRV----ALGETQL-VQEVRRFLIDNGVSLDSFSQAAAERS 585
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ ILV+N+P +E++E F FG L V LP+ + + VEF+ EA++A
Sbjct: 586 KTVILVKNLPAGTLAAELQETFGHFGSLGRVLLPEGGITA-------IVEFLEPLEARKA 638
Query: 745 MKALCQSTHLYGRRLVLEWA 764
+ L S + L LEWA
Sbjct: 639 FRHLAYS-KFHHVPLYLEWA 657
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D+ +QG+P ++ E ++EP T+
Sbjct: 237 DEGSEAEEEDSSATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 296
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 297 KLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 349
Query: 644 LKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-------------- 689
LK + IE+ R E T K N K +IL
Sbjct: 350 LKC-NREYMGGRYIEVFR-----EKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGR 403
Query: 690 --VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
VRN+P+ + + ++E+LF +G L + P + + +GF F+ F+ A +A
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFITFMFPEHAVKA 459
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAQ 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|119618468|gb|EAW98062.1| RNA binding motif protein 19, isoform CRA_a [Homo sapiens]
gi|119618469|gb|EAW98063.1| RNA binding motif protein 19, isoform CRA_a [Homo sapiens]
Length = 777
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 196/454 (43%), Positives = 268/454 (59%), Gaps = 21/454 (4%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAYQHLD 399
+R + VTE ++ + PL V + I + K G+ V F E QA +
Sbjct: 299 LRGAPFNVTEKNVMEFL---APLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKC-- 353
Query: 400 GTVFLGRMLHLIPGKPKENEGNVDGKVHCCISER--KLDAFNQVVEARSKRIILVKNLPY 457
++G + + E + +V + + LD+F+Q RSK +ILVKNLP
Sbjct: 354 NREYMGETKGSVAVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAAERSKTVILVKNLPA 413
Query: 458 RTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEW 517
TL +L+ F FG LGRVL+P GIT +VEFL+ +A+ AF LAY+KF VPLYLEW
Sbjct: 414 GTLAAELQETFGHFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEW 473
Query: 518 APEGVFAEAKEKSK------GKEKEKNEEEGE---EGEEEKKENTAEEDNQQGVPEVEEN 568
AP GVF+ + K + EK+ E E +GE + EN EE ++EE
Sbjct: 474 APVGVFSSTAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEE 533
Query: 569 VEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSM 627
EE+EE E P TL+IKNLNF++TE+ ++ F K G + S ++++KK+ G LSM
Sbjct: 534 EEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKN--KAGVLLSM 591
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSK 687
G+GFV++ E +ALK LQ +D H++E++ S R + A T+ RK KQT SK
Sbjct: 592 GFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKP-AVTLARKKQVPRKQTTSK 650
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
ILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRGFGFV+F+TK +AKRA A
Sbjct: 651 ILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNA 710
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
LC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 711 LCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHF 744
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 197/483 (40%), Gaps = 125/483 (25%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ A +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 73 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 128
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEENEDES 180
D F +FL +H K S L + G+E EEE E
Sbjct: 129 EDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGED 188
Query: 181 NNQIA--------HADISDMEYLKLKT--------------------------------- 199
+ A ++SDM+YLK K
Sbjct: 189 LEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSS 248
Query: 200 -----KSKDT--------APSDPSVPPVSKA----PVHKRQ----YHTIVVKNLPAGVKK 238
+ +D+ P+ PP ++A P ++++ + T+ ++ P V +
Sbjct: 249 ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTTVKLRGAPFNVTE 308
Query: 239 KDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFW---KGKQLNI 289
K++ + PL ++R G ++ F +E+ +AL N+ + KG
Sbjct: 309 KNVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGETKGSVAVR 368
Query: 290 YKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR--IFVRNLSYT 347
+ + +N S+++ F++ AE + I V+NL
Sbjct: 369 VALGETQLVQEVRRFLIDNGVSLDS--------------FSQAAAERSKTVILVKNLPAG 414
Query: 348 VTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRM 407
+L + F +G L V+LP T A+V FL P A +A++HL + F
Sbjct: 415 TLAAELQETFGHFGSLGRVLLPEGGIT------AIVEFLEPLEARKAFRHLAYSKFHHVP 468
Query: 408 LHL 410
L+L
Sbjct: 469 LYL 471
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 41/208 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE A +
Sbjct: 549 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAGVLLSMGFGFVEYRKPEQAQK 606
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERK------LDAFNQVVEARS 446
A + L G V VDG K+ ISER L QV ++
Sbjct: 607 ALKQLQGHV-------------------VDGHKLEVRISERATKPAVTLARKKQVPRKQT 647
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAA 499
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK A
Sbjct: 648 TSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRA 707
Query: 500 FNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
FN+L + T L LEWA V +A
Sbjct: 708 FNALCHSTHLYGRRLVLEWADSEVTLQA 735
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 107/254 (42%), Gaps = 45/254 (17%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDEEREPEP---------DTT 582
+EG E EEE T E D+ +QG+P ++ E +P TT
Sbjct: 237 DEGSEAEEEDSSATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTT 296
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+ ++ FN TE ++ P+A V K+ GY FV F E + Q
Sbjct: 297 VKLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQ 349
Query: 643 ALK------------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILV 690
ALK V +L E Q+ ++ R L ++ S A+++ + ILV
Sbjct: 350 ALKCNREYMGETKGSVAVRVALGETQL-VQEVRRFLIDNGVSLDSFSQAAAERSKTVILV 408
Query: 691 RNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQ 750
+N+P +E++E F FG L V LP+ + + VEF+ EA++A + L
Sbjct: 409 KNLPAGTLAAELQETFGHFGSLGRVLLPEGGITA-------IVEFLEPLEARKAFRHLAY 461
Query: 751 STHLYGRRLVLEWA 764
S + L LEWA
Sbjct: 462 S-KFHHVPLYLEWA 474
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAQ 59
Query: 746 KALCQSTHLYGRRLVLEWA 764
K +S + R+ +E+
Sbjct: 60 KHFNKS-FIDTSRITVEFC 77
>gi|13279134|gb|AAH04289.1| RBM19 protein [Homo sapiens]
gi|13544005|gb|AAH06137.1| RBM19 protein [Homo sapiens]
gi|190689379|gb|ACE86464.1| RNA binding motif protein 19 protein [synthetic construct]
gi|190690741|gb|ACE87145.1| RNA binding motif protein 19 protein [synthetic construct]
Length = 960
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/357 (49%), Positives = 233/357 (65%), Gaps = 13/357 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P G T +VEFL+
Sbjct: 574 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGTTAIVEFLEPL 633
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSK------GKEKEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K + EK+ E E +G
Sbjct: 634 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDG 693
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKC 604
E + EN EE ++EE EE+EE E P TL+IKNLNF++TE+ ++ F K
Sbjct: 694 ETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKV 753
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 754 GTVKSCSISKKKN--KAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 811
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T+ RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+
Sbjct: 812 ATKP-AVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGT 870
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHF 927
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 227/480 (47%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ A +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 73 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 128
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEENEDES 180
D F +FL +H K S L + G+E EEE E
Sbjct: 129 EDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGED 188
Query: 181 NNQIA--------HADISDMEYLKLKT--------------------------------- 199
+ A ++SDM+YLK K
Sbjct: 189 LEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSS 248
Query: 200 -----KSKDT--------APSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
+ +D+ P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 249 ATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 308
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 309 NVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 366
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQ-EDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ N GA + K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 367 EKNVPTTKGAPKNTT---------KSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA +TF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLP 477
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 45/210 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE A +
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAGVLLSMGFGFVEYRKPEQAQK 789
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER V AR K++
Sbjct: 790 ALKQLQGHV-------------------VDGHKLEVRISERATKP--AVTLARKKQVPRK 828
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 829 QTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAK 888
Query: 498 AAFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 889 RAFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D+ +QG+P ++ E ++EP T+
Sbjct: 237 DEGSEAEEEDSSATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 296
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 297 KLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 349
Query: 644 LKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-------------- 689
LK + IE+ R E T K N K +IL
Sbjct: 350 LKC-NREYMGGRYIEVFR-----EKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGR 403
Query: 690 --VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
VRN+P+ + + ++E+LF +G L + P + + +GF F+ F+ A +A
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFITFMFPEHAVKA 459
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 171/440 (38%), Gaps = 96/440 (21%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAY---- 395
+R + VTE ++ + PL V + I + K G+ V F E QA
Sbjct: 298 LRGAPFNVTEKNVMEFL---APLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNR 354
Query: 396 QHLDGT---VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+++ G VF + + G PK + G++ L + + + V
Sbjct: 355 EYMGGRYIEVFREKNVPTTKGAPKNTTKSWQGRI--------LGENEEEEDLAESGRLFV 406
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYT 506
+NLPY + DL+ LF +G L + P +T + F+ A A++ +
Sbjct: 407 RNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQ 466
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSK--GKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
F+ L++ P + EA E + G K ++E ++ K N+A N
Sbjct: 467 VFQGRMLHV--LPSTIKKEASEDASALGSSSYKKKKEAQD-----KANSASSHNW----- 514
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
TL+ + N+ D+I + + + T ++ D ++ G
Sbjct: 515 ----------------NTLF---MGPNAVADAIAQKY-------NATKSQVFDHETKGSV 548
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
A++V +L E Q+ ++ R L ++ S A+++
Sbjct: 549 ------------------AVRV----ALGETQL-VQEVRRFLIDNGVSLDSFSQAAAERS 585
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ ILV+N+P +E++E F FG L V LP+ + VEF+ EA++A
Sbjct: 586 KTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGTTA-------IVEFLEPLEARKA 638
Query: 745 MKALCQSTHLYGRRLVLEWA 764
+ L S + L LEWA
Sbjct: 639 FRHLAYS-KFHHVPLYLEWA 657
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAQ 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|168278697|dbj|BAG11228.1| RNA binding motif protein 19 [synthetic construct]
Length = 960
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/357 (49%), Positives = 233/357 (65%), Gaps = 13/357 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P G T +VEFL+
Sbjct: 574 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGTTAIVEFLEPL 633
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSK------GKEKEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K + EK+ E E +G
Sbjct: 634 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDG 693
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKC 604
E + EN EE ++EE EE+EE E P TL+IKNLNF++TE+ ++ F K
Sbjct: 694 ETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKV 753
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 754 GTVKSCSISKKKN--KAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 811
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T+ RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+
Sbjct: 812 ATKP-AVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGT 870
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHF 927
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 227/480 (47%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ A +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 73 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 128
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEENEDES 180
D F +FL +H K S L + G+E EEE E
Sbjct: 129 EDTEFQEFLSVHRRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGED 188
Query: 181 NNQIA--------HADISDMEYLKLKT--------------------------------- 199
+ A ++SDM+YLK K
Sbjct: 189 LEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSS 248
Query: 200 -----KSKDT--------APSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
+ +D+ P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 249 ATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 308
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 309 NVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 366
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQ-EDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ N GA + K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 367 EKNVPTTKGAPKNTT---------KSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA +TF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLP 477
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 45/210 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE A +
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAGVLLSMGFGFVEYRKPEQAQK 789
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER V AR K++
Sbjct: 790 ALKQLQGHV-------------------VDGHKLEVRISERATKP--AVTLARKKQVPRK 828
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 829 QTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAK 888
Query: 498 AAFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 889 RAFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D+ +QG+P ++ E ++EP T+
Sbjct: 237 DEGSEAEEEDSSATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 296
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 297 KLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 349
Query: 644 LKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-------------- 689
LK + IE+ R E T K N K +IL
Sbjct: 350 LKC-NREYMGGRYIEVFR-----EKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGR 403
Query: 690 --VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
VRN+P+ + + ++E+LF +G L + P + + +GF F+ F+ A +A
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFITFMFPEHAVKA 459
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 171/440 (38%), Gaps = 96/440 (21%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAY---- 395
+R + VTE ++ + PL V + I + K G+ V F E QA
Sbjct: 298 LRGAPFNVTEKNVMEFL---APLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNR 354
Query: 396 QHLDGT---VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+++ G VF + + G PK + G++ L + + + V
Sbjct: 355 EYMGGRYIEVFREKNVPTTKGAPKNTTKSWQGRI--------LGENEEEEDLAESGRLFV 406
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYT 506
+NLPY + DL+ LF +G L + P +T + F+ A A++ +
Sbjct: 407 RNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQ 466
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSK--GKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
F+ L++ P + EA E + G K ++E ++ K N+A N
Sbjct: 467 VFQGRMLHV--LPSTIKKEASEDASALGSSSYKKKKEAQD-----KANSASSHNW----- 514
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
TL+ + N+ D+I + + + T ++ D ++ G
Sbjct: 515 ----------------NTLF---MGPNAVADAIAQKY-------NATKSQVFDHETKGSV 548
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
A++V +L E Q+ ++ R L ++ S A+++
Sbjct: 549 ------------------AVRV----ALGETQL-VQEVRRFLIDNGVSLDSFSQAAAERS 585
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ ILV+N+P +E++E F FG L V LP+ + VEF+ EA++A
Sbjct: 586 KTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGTTA-------IVEFLEPLEARKA 638
Query: 745 MKALCQSTHLYGRRLVLEWA 764
+ L S + L LEWA
Sbjct: 639 FRHLAYS-KFHHVPLYLEWA 657
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAQ 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|40788328|dbj|BAA31657.2| KIAA0682 protein [Homo sapiens]
Length = 973
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/357 (49%), Positives = 233/357 (65%), Gaps = 13/357 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P G T +VEFL+
Sbjct: 587 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGTTAIVEFLEPL 646
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSK------GKEKEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K + EK+ E E +G
Sbjct: 647 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDG 706
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKC 604
E + EN EE ++EE EE+EE E P TL+IKNLNF++TE+ ++ F K
Sbjct: 707 ETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKV 766
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 767 GTVKSCSISKKKN--KAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 824
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T+ RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+
Sbjct: 825 ATKP-AVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGT 883
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 884 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHF 940
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 227/480 (47%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ A +FN +++ +SRI
Sbjct: 26 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKHFNKSFIDTSRI 85
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 86 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 141
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEENEDES 180
D F +FL +H K S L + G+E EEE E
Sbjct: 142 EDTEFQEFLSVHRRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGED 201
Query: 181 NNQIA--------HADISDMEYLKLKT--------------------------------- 199
+ A ++SDM+YLK K
Sbjct: 202 LEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSS 261
Query: 200 -----KSKDT--------APSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
+ +D+ P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 262 ATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 321
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 322 NVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 379
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQ-EDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ N GA + K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 380 EKNVPTTKGAPKNTT---------KSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEED 430
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA +TF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 431 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLP 490
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 45/210 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE A +
Sbjct: 745 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAGVLLSMGFGFVEYRKPEQAQK 802
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER V AR K++
Sbjct: 803 ALKQLQGHV-------------------VDGHKLEVRISERATKP--AVTLARKKQVPRK 841
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 842 QTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAK 901
Query: 498 AAFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 902 RAFNALCHSTHLYGRRLVLEWADSEVTLQA 931
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D+ +QG+P ++ E ++EP T+
Sbjct: 250 DEGSEAEEEDSSATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 309
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 310 KLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 362
Query: 644 LKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-------------- 689
LK + IE+ R E T K N K +IL
Sbjct: 363 LKC-NREYMGGRYIEVFR-----EKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGR 416
Query: 690 --VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
VRN+P+ + + ++E+LF +G L + P + + +GF F+ F+ A +A
Sbjct: 417 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFITFMFPEHAVKA 472
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 171/440 (38%), Gaps = 96/440 (21%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAY---- 395
+R + VTE ++ + PL V + I + K G+ V F E QA
Sbjct: 311 LRGAPFNVTEKNVMEFL---APLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNR 367
Query: 396 QHLDGT---VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+++ G VF + + G PK + G++ L + + + V
Sbjct: 368 EYMGGRYIEVFREKNVPTTKGAPKNTTKSWQGRI--------LGENEEEEDLAESGRLFV 419
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYT 506
+NLPY + DL+ LF +G L + P +T + F+ A A++ +
Sbjct: 420 RNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQ 479
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSK--GKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
F+ L++ P + EA E + G K ++E ++ K N+A N
Sbjct: 480 VFQGRMLHV--LPSTIKKEASEDASALGSSSYKKKKEAQD-----KANSASSHNW----- 527
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
TL+ + N+ D+I + + + T ++ D ++ G
Sbjct: 528 ----------------NTLF---MGPNAVADAIAQKY-------NATKSQVFDHETKGSV 561
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
A++V +L E Q+ ++ R L ++ S A+++
Sbjct: 562 ------------------AVRV----ALGETQL-VQEVRRFLIDNGVSLDSFSQAAAERS 598
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ ILV+N+P +E++E F FG L V LP+ + VEF+ EA++A
Sbjct: 599 KTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGTTA-------IVEFLEPLEARKA 651
Query: 745 MKALCQSTHLYGRRLVLEWA 764
+ L S + L LEWA
Sbjct: 652 FRHLAYS-KFHHVPLYLEWA 670
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 681 AKQTG----SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
+KQ G S+++V+N+P K+ +LF AFG L L K G R FGF+ F
Sbjct: 6 SKQRGPCAMSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFK 63
Query: 737 TKNEAKRAMKALCQS 751
++ EA++A K +S
Sbjct: 64 SEEEAQKAQKHFNKS 78
>gi|431914230|gb|ELK15488.1| Putative RNA-binding protein 19 [Pteropus alecto]
Length = 949
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 179/364 (49%), Positives = 236/364 (64%), Gaps = 19/364 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK ++LVKNLP TL +L+ +F FG LGRVL+P G+T +VEFL+
Sbjct: 578 LDSFSQAAAERSKTVMLVKNLPAGTLAAELQEIFGQFGSLGRVLLPEGGVTAIVEFLEPL 637
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE--------KEKNEEE----G 542
+A+ AF LAY+KF VPLYLEWAP GVF+ + + +E EK E E G
Sbjct: 638 EARKAFRHLAYSKFHHVPLYLEWAPMGVFSSSAPAPQKEEPQYALVEAAEKVEPETVLDG 697
Query: 543 EEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK 602
E E EK A ED+ + E EEDEE E P TL+IKNLNF++TE++++ F
Sbjct: 698 ETPEGEKPTEGAAEDSSAKM----EEEEEDEEEEGLPGCTLFIKNLNFDTTEETLKGVFS 753
Query: 603 KCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS 662
K G + S +++RKK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S
Sbjct: 754 KVGVVKSCSISRKKN--KAGVMLSMGFGFVEYRKPEQAQKALKQLQGHVVDSHKLEVRIS 811
Query: 663 NRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV 722
R + A T RK KQT SKILVRNIPFQA + E+ ELF FGELK VRLPKKM
Sbjct: 812 ERATKP-ALTSTRKKQVARKQTTSKILVRNIPFQADRREIRELFSTFGELKTVRLPKKMA 870
Query: 723 GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFG 782
G+G HRGFGFV+F++K +AKRA ALC STHLYGRRLVLEWA+ +++ +R++T +F
Sbjct: 871 GTGTHRGFGFVDFLSKQDAKRAFNALCHSTHLYGRRLVLEWADSEVSLQALRRKTAEHFH 930
Query: 783 TAVG 786
G
Sbjct: 931 GKTG 934
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/491 (29%), Positives = 219/491 (44%), Gaps = 129/491 (26%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL + + ++V +SRI
Sbjct: 13 MKEERFRQLFGAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQRALGHLHKSFVDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGK--------- 139
VE C + GD TKP++WS++A QK P Q +P KDS P +
Sbjct: 73 TVEFCKSFGDPTKPRAWSRHA------QK-----PSQSKQPSKNKDSVPRETKKEDRKKK 121
Query: 140 ------KSKNDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEE 171
K K D F +FL +H K L + G+E
Sbjct: 122 VAGELEKLKEDTAFQEFLSVHQKRTQVATWANDALDAEPAKGKSKPADDYLNFDSDSGQE 181
Query: 172 KEEENEDESNNQ--------IAHADISDMEYLKLKT------------------------ 199
EEE+ E + ++SDM+YLK K
Sbjct: 182 SEEEDAGEGPEEEDDLEPKAAVRKELSDMDYLKSKVVRAESPSSEEEEDEESEDEAVNCD 241
Query: 200 --------------KSKDTAPSDPS----VPPVSKAPVHKRQY-------------HTIV 228
+D A S P P K P R HT+
Sbjct: 242 EGSAAEEEDSCASPARQDGAGSGPGPEQRTPSGDKKPQETRAETEKPAIQKEPSTPHTVK 301
Query: 229 VKNLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFW 282
++ P V +K++ + PL ++R G ++ F E+ KAL N+ +
Sbjct: 302 LRGAPFNVTEKNVVEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSSEEEVKKALKCNRDYM 361
Query: 283 KGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFV 341
G+ + +++ + N G ++ A W+ + + ED+A+SGR+FV
Sbjct: 362 GGRYIEVFR--EKNVPTTKGPPKNSTKA---------WQGRTLGENEEEEDLADSGRLFV 410
Query: 342 RNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGT 401
RNL YT +E+DL K+F +YGPL+E+ PID T K KGFA VTF+ PEHA +AY +DG
Sbjct: 411 RNLPYTSSEEDLEKIFSRYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQ 470
Query: 402 VFLGRMLHLIP 412
VF GRMLH++P
Sbjct: 471 VFQGRMLHVLP 481
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 27/193 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I ++ +K + GF V + PE A +
Sbjct: 734 LFIKNLNFDTTEETLKGVFSKVGVVKSC--SISRKKNKAGVMLSMGFGFVEYRKPEQAQK 791
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + L G H++ E + S RK QV ++ ILV+
Sbjct: 792 ALKQLQG--------HVVDSHKLEVRISERATKPALTSTRK----KQVARKQTTSKILVR 839
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAY- 505
N+P++ +++ LF FG+L V +P + G V+FL K AK AFN+L +
Sbjct: 840 NIPFQADRREIRELFSTFGELKTVRLPKKMAGTGTHRGFGFVDFLSKQDAKRAFNALCHS 899
Query: 506 TKFKEVPLYLEWA 518
T L LEWA
Sbjct: 900 THLYGRRLVLEWA 912
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+RA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFGAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQRAL 59
Query: 746 KALCQS 751
L +S
Sbjct: 60 GHLHKS 65
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 22/183 (12%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
++EP T+ ++ FN TE ++ P+A V K+ GY FV
Sbjct: 291 QKEPSTPHTVKLRGAPFNVTEKNVVEFLAPLKPVAIRIVRNAHGNKT-------GYIFVD 343
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT--------- 684
F + E + +ALK ++ + IE+ R +N+ + K + +T
Sbjct: 344 FSSEEEVKKALKCNRDY-MGGRYIEVFR-EKNVPTTKGPPKNSTKAWQGRTLGENEEEED 401
Query: 685 ---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
++ VRN+P+ + + ++E++F +G L + P + + +GF FV F+ A
Sbjct: 402 LADSGRLFVRNLPYTSSEEDLEKIFSRYGPLSELHYPIDSL-TKKPKGFAFVTFMFPEHA 460
Query: 742 KRA 744
+A
Sbjct: 461 VKA 463
>gi|226497574|ref|NP_057280.2| probable RNA-binding protein 19 [Homo sapiens]
gi|226497654|ref|NP_001140170.1| probable RNA-binding protein 19 [Homo sapiens]
gi|226497734|ref|NP_001140171.1| probable RNA-binding protein 19 [Homo sapiens]
gi|308153566|sp|Q9Y4C8.3|RBM19_HUMAN RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
Length = 960
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 178/357 (49%), Positives = 232/357 (64%), Gaps = 13/357 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 574 LDSFSQAAAERSKTVILVKNLPAGTLAAQLQETFGHFGSLGRVLLPEGGITAIVEFLEPL 633
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSK------GKEKEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ + K + EK+ E E +G
Sbjct: 634 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSSTAPQKKKLQDTPSEPMEKDPAEPETVPDG 693
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKC 604
E + EN EE ++EE EE+EE E P TL+IKNLNF++TE+ ++ F K
Sbjct: 694 ETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKV 753
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 754 GTVKSCSISKKKN--KAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 811
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T+ RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+
Sbjct: 812 ATKP-AVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGT 870
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHF 927
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 227/480 (47%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ A +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 73 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 128
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEENEDES 180
D F +FL +H K S L + G+E EEE E
Sbjct: 129 EDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGED 188
Query: 181 NNQIA--------HADISDMEYLKLKT--------------------------------- 199
+ A ++SDM+YLK K
Sbjct: 189 LEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSS 248
Query: 200 -----KSKDT--------APSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
+ +D+ P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 249 ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 308
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 309 NVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 366
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQ-EDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ N GA + K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 367 EKNVPTTKGAPKNTT---------KSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA +TF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLP 477
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 45/210 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE A +
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAGVLLSMGFGFVEYRKPEQAQK 789
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER V AR K++
Sbjct: 790 ALKQLQGHV-------------------VDGHKLEVRISERATKP--AVTLARKKQVPRK 828
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 829 QTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAK 888
Query: 498 AAFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 889 RAFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D+ +QG+P ++ E ++EP T+
Sbjct: 237 DEGSEAEEEDSSATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 296
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 297 KLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 349
Query: 644 LKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-------------- 689
LK + IE+ R E T K N K +IL
Sbjct: 350 LKC-NREYMGGRYIEVFR-----EKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGR 403
Query: 690 --VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
VRN+P+ + + ++E+LF +G L + P + + +GF F+ F+ A +A
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFITFMFPEHAVKA 459
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 172/440 (39%), Gaps = 96/440 (21%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAY---- 395
+R + VTE ++ + PL V + I + K G+ V F E QA
Sbjct: 298 LRGAPFNVTEKNVMEFL---APLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNR 354
Query: 396 QHLDGT---VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+++ G VF + + G PK + G++ L + + + V
Sbjct: 355 EYMGGRYIEVFREKNVPTTKGAPKNTTKSWQGRI--------LGENEEEEDLAESGRLFV 406
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYT 506
+NLPY + DL+ LF +G L + P +T + F+ A A++ +
Sbjct: 407 RNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQ 466
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSK--GKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
F+ L++ P + EA E + G K ++E ++ K N+A N
Sbjct: 467 VFQGRMLHV--LPSTIKKEASEDASALGSSSYKKKKEAQD-----KANSASSHNW----- 514
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
TL+ + N+ D+I + + + T ++ D ++ G
Sbjct: 515 ----------------NTLF---MGPNAVADAIAQKY-------NATKSQVFDHETKGSV 548
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
A++V +L E Q+ ++ R L ++ S A+++
Sbjct: 549 ------------------AVRV----ALGETQL-VQEVRRFLIDNGVSLDSFSQAAAERS 585
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ ILV+N+P ++++E F FG L V LP+ + + VEF+ EA++A
Sbjct: 586 KTVILVKNLPAGTLAAQLQETFGHFGSLGRVLLPEGGITA-------IVEFLEPLEARKA 638
Query: 745 MKALCQSTHLYGRRLVLEWA 764
+ L S + L LEWA
Sbjct: 639 FRHLAYS-KFHHVPLYLEWA 657
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAQ 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|332250675|ref|XP_003274476.1| PREDICTED: probable RNA-binding protein 19 [Nomascus leucogenys]
Length = 997
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 178/357 (49%), Positives = 233/357 (65%), Gaps = 13/357 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 611 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGITAIVEFLEPL 670
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSK------GKEKEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K + EK+ E E +G
Sbjct: 671 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDAPSEPMEKDPAEPETVPDG 730
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKC 604
+ + EN EE ++EE EE+EE E P TL+IKNLNF++TE+ ++ F K
Sbjct: 731 KTPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKV 790
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 791 GTVKSCSISKKKN--KAGALLSMGFGFVEYRKPEQTQKALKQLQGHIVDGHKLEVRISER 848
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+
Sbjct: 849 ATKP-AVTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGT 907
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 908 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHF 964
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 150/480 (31%), Positives = 226/480 (47%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL +FN +++ +SRI
Sbjct: 50 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKHFNKSFIDTSRI 109
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 110 TVEFCKSFGDPAKPRAWSKHAHKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 165
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEENEDES 180
D F +FL +H K S L + G+E EEE E
Sbjct: 166 EDTEFQEFLSVHQRRTQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGED 225
Query: 181 NNQIA--------HADISDMEYLKLKT--------------------------------- 199
+ A ++SDM+YLK K
Sbjct: 226 LEEEASLEPKAAVQKELSDMDYLKSKMVKAESSSSSEEGESEDEAVHCDEGSEAEEEDST 285
Query: 200 -----KSKDT--------APSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
+ +D+ P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 286 ATPILQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 345
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G + F +E+ +AL N+ + G+ + +++
Sbjct: 346 NVMEFLAPLKPVAIRIVRNAHGNKTGYIFADFSNEEEVKQALKCNREYMGGRYIEVFR-- 403
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQ-EDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ N GA + K W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 404 EKNIPTTKGAPKNTT---------KSWQGRILRENEEEEDLAESGRLFVRNLPYTSTEED 454
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGF VTF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 455 LEKLFSKYGPLSELHYPIDSLTKKPKGFGFVTFMFPEHAVKAYSEVDGQVFQGRMLHVLP 514
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 43/209 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE +
Sbjct: 769 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAGALLSMGFGFVEYRKPEQTQK 826
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI---- 449
A + L G H++ G K+ ISER V AR K++
Sbjct: 827 ALKQLQG--------HIVDGH----------KLEVRISERATKP--AVTSARKKQVPRKQ 866
Query: 450 ----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKA 498
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 867 TTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKR 926
Query: 499 AFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 927 AFNALCHSTHLYGRRLVLEWADSEVTLQA 955
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 175/440 (39%), Gaps = 96/440 (21%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAY---- 395
+R + VTE ++ + PL V + I + K G+ F E QA
Sbjct: 335 LRGAPFNVTEKNVMEFL---APLKPVAIRIVRNAHGNKTGYIFADFSNEEEVKQALKCNR 391
Query: 396 QHLDGT---VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+++ G VF + + G PK + G++ R+ + + E+ + V
Sbjct: 392 EYMGGRYIEVFREKNIPTTKGAPKNTTKSWQGRIL-----RENEEEEDLAESGR---LFV 443
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYT 506
+NLPY + DL+ LF +G L + P +T G V F+ A A++ +
Sbjct: 444 RNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFGFVTFMFPEHAVKAYSEVDGQ 503
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSK--GKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
F+ L++ P + EA E + G K ++E ++ K N+A N
Sbjct: 504 VFQGRMLHV--LPSTIKKEASEDASALGSSSYKKKKEAQD-----KANSASSHNW----- 551
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
TL+ + N+ D+I + + + T ++ D ++ G
Sbjct: 552 ----------------NTLF---MGPNAVADAIAQKY-------NATKSQVFDHETKGSV 585
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
A++V +L E Q+ ++ R L ++ S A+++
Sbjct: 586 ------------------AVRV----ALGETQL-VQEVRRFLIDNGVSLDSFSQAAAERS 622
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ ILV+N+P +E++E F FG L V LP+ + + VEF+ EA++A
Sbjct: 623 KTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGITA-------IVEFLEPLEARKA 675
Query: 745 MKALCQSTHLYGRRLVLEWA 764
+ L S + L LEWA
Sbjct: 676 FRHLAYS-KFHHVPLYLEWA 694
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPEVEENVEEDE--------EREPEPDTTL 583
+EG E EEE T E D+ +QG+P ++ E ++EP T+
Sbjct: 274 DEGSEAEEEDSTATPILQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTV 333
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY F F E + QA
Sbjct: 334 KLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYIFADFSNEEEVKQA 386
Query: 644 LKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-------------- 689
LK + IE+ R E T K N K +IL
Sbjct: 387 LKC-NREYMGGRYIEVFR-----EKNIPTTKGAPKNTTKSWQGRILRENEEEEDLAESGR 440
Query: 690 --VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
VRN+P+ + + ++E+LF +G L + P + + +GFGFV F+ A +A
Sbjct: 441 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFGFVTFMFPEHAVKA 496
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 681 AKQTG----SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
+KQ G S+++V+N+P K+ +LF AFG L L K G R FGF+ F
Sbjct: 30 SKQRGPCAMSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFK 87
Query: 737 TKNEAKRAMKALCQS 751
++ EA++A+K +S
Sbjct: 88 SEEEAQKALKHFNKS 102
>gi|391335607|ref|XP_003742181.1| PREDICTED: probable RNA-binding protein 19-like [Metaseiulus
occidentalis]
Length = 836
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 178/351 (50%), Positives = 224/351 (63%), Gaps = 13/351 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL-GRVLVPPYGITGLVEFLQK 493
L F Q V RSK I+LVKNLP T L LF+P + RV++PP G+T LVEF +
Sbjct: 472 LSVFKQNVTERSKTILLVKNLPANTKEITLWDLFDPKKKVVRRVVLPPSGVTALVEFAEP 531
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
A++AF LAYT F + PLYLEWAP VF+ + + G G+ + N
Sbjct: 532 QDARSAFKRLAYTMFMDQPLYLEWAPVNVFSRDATADEATRPSDELDTGTAGDGDDGRNE 591
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
A+ Q V EV E EPE + L++KNLNF++T D ++RHF KC + TVA
Sbjct: 592 AQ--TQSVVDEVGGAGSE----EPEEGSVLFVKNLNFSTTNDVLQRHFSKCATVVQATVA 645
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
K DP+ PG+ LSMGYGFVQF +++ ALK LQ+S+LD H + LK S R E +A V
Sbjct: 646 TKSDPRQPGKTLSMGYGFVQFKSKQDAMMALKKLQHSTLDSHTLGLKVSRR--EVKAAGV 703
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG--SGLHRGFG 731
+RK+ + K + +KILVRN+PFQA + E+ ELF FGELK VRLPKKM G SG HRGF
Sbjct: 704 ERKTQKLGKAS-TKILVRNVPFQANRKEIFELFAVFGELKTVRLPKKMFGGDSGSHRGFA 762
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVED-IRKRTNRYF 781
FVEFITK++AKRA +LCQSTHLYGRRLVLEWAEE + D IRK+T F
Sbjct: 763 FVEFITKSDAKRAFDSLCQSTHLYGRRLVLEWAEEEEEEVDLIRKKTAEQF 813
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 221/405 (54%), Gaps = 42/405 (10%)
Query: 25 FIYKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
F + T+ +++ F KGTVTDV LK+T EGKFRRF FIG+ ++A+ A YF+ T++
Sbjct: 10 FPKEATENKIRDFFSSKGTVTDVALKFTPEGKFRRFGFIGFASSNEAEEAQKYFDKTFMG 69
Query: 85 SSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKND 144
+SR+ VE L + KP+ WSKY+ S+AY K H KQ + T+ + +K +
Sbjct: 70 TSRLHVEISKELAE--KPRPWSKYSEGSTAYLKTHPEEAKQKAEQLETERKEKLEKERIR 127
Query: 145 PTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDT 204
DFL K+V +P +D + KE ++S + D + E T + +
Sbjct: 128 REKKDFL----KEVFGDVP--EEDEKFKEFLAVNQSEKLVWTNDEAKQETSAGTTHTDED 181
Query: 205 AP-----SDPSVPPVSKAPVHKRQY-HTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL 258
P SD +P K + H +VV+NL K+KDLK++FK L + S+R
Sbjct: 182 PPCEVNDSDKKLP--------KEIFPHVVVVRNLSFKWKRKDLKSFFKGLSVCSIRKCLR 233
Query: 259 ----GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMEN 314
G+AY+ F+ E++ +AL +K F + +Q+ + K+S D + E
Sbjct: 234 AGVKGVAYVAFETEEDLKEALGLDKCFMERRQVRVLKHS------------DRTKETQE- 280
Query: 315 IKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET 374
K + +D E +A++GR+F+RNL YT TE++L LF+ +GP+AE+ L ID T
Sbjct: 281 ---KPVSAYKDKEVAPEVVADTGRLFIRNLPYTTTENELEDLFKPFGPIAELHLSIDSIT 337
Query: 375 DKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
K KGFA V ++ PEHA +A+Q LD T F GR+LH+IPG K+ +
Sbjct: 338 KKPKGFAFVAYVFPEHAMKAHQALDYTTFHGRLLHIIPGLAKQED 382
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 141/352 (40%), Gaps = 77/352 (21%)
Query: 214 VSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP---------LPLASV----------- 253
V K V +R ++VKNLPA K+ L F P LP + V
Sbjct: 474 VFKQNVTERSKTILLVKNLPANTKEITLWDLFDPKKKVVRRVVLPPSGVTALVEFAEPQD 533
Query: 254 -RTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKY---------SGA 303
R+ F +AY F D+ + + +N++ S+D +A +G
Sbjct: 534 ARSAFKRLAYTMFMDQP----------LYLEWAPVNVF--SRDATADEATRPSDELDTGT 581
Query: 304 ADDNNNASMENIKAKHWKSQEDSVQFA--EDIAESGRIFVRNLSYTVTEDDLTKLFEKYG 361
A D ++ E +S D V A E+ E +FV+NL+++ T D L + F K
Sbjct: 582 AGDGDDGRNE----AQTQSVVDEVGGAGSEEPEEGSVLFVKNLNFSTTNDVLQRHFSKCA 637
Query: 362 PLAEVILPIDKETDK-----TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
+ + + + + + G+ V F + A A + L + L L + +
Sbjct: 638 TVVQATVATKSDPRQPGKTLSMGYGFVQFKSKQDAMMALKKLQHSTLDSHTLGLKVSRRE 697
Query: 417 ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGR 476
V+ K ++ +A +K ILV+N+P++ ++ LF FG+L
Sbjct: 698 VKAAGVERKTQ------------KLGKASTK--ILVRNVPFQANRKEIFELFAVFGELKT 743
Query: 477 VLVPPYGITG---------LVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
V +P G VEF+ K+ AK AF+SL T L LEWA
Sbjct: 744 VRLPKKMFGGDSGSHRGFAFVEFITKSDAKRAFDSLCQSTHLYGRRLVLEWA 795
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+ ++NL+F ++ FK + S+ + K G +V F T E L
Sbjct: 201 VVVVRNLSFKWKRKDLKSFFKGLS-VCSIRKCLRAGVK--------GVAYVAFETEEDLK 251
Query: 642 QALKVLQNSSLDEHQIE-LKRSNRNLESEATTV-----KRKSSNVAKQTGSKILVRNIPF 695
+AL L ++ Q+ LK S+R E++ V K + V TG ++ +RN+P+
Sbjct: 252 EALG-LDKCFMERRQVRVLKHSDRTKETQEKPVSAYKDKEVAPEVVADTG-RLFIRNLPY 309
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
++E+E+LFK FG + + L + + +GF FV ++ A +A +AL +T +
Sbjct: 310 TTTENELEDLFKPFGPIAELHLSIDSI-TKKPKGFAFVAYVFPEHAMKAHQALDYTT-FH 367
Query: 756 GRRL 759
GR L
Sbjct: 368 GRLL 371
>gi|226533389|ref|NP_001034357.2| RNA binding motif protein 19 [Gallus gallus]
Length = 957
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 176/361 (48%), Positives = 226/361 (62%), Gaps = 34/361 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP T +L+A+F G LGRVL+P GIT +VEFL+
Sbjct: 586 LDSFSQAAGERSKTVILVKNLPATTSTAELEAVFGKHGSLGRVLLPTGGITAIVEFLEPI 645
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AK AF LAY+KF VPLYLEWAP GVF+ S +K+ E +EGEE
Sbjct: 646 EAKQAFTKLAYSKFHSVPLYLEWAPMGVFS-----SPALQKKNVEALEKEGEE------- 693
Query: 555 EEDNQQGVPEVEENVEEDEEREPE--------------PDTTLYIKNLNFNSTEDSIRRH 600
+ VP+ + V+ EE + P TL+IKNLNF +TE +++
Sbjct: 694 -----RLVPDGDTTVKGSEETSAQDEEEDEEEDEEESIPGCTLFIKNLNFTTTEGTLKET 748
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
F K G + S T+++KKD G LSMG+GFV++ ES +AL+ LQ +D H++E+K
Sbjct: 749 FSKVGAVKSCTISKKKD--KAGTLLSMGFGFVEYKKPESAQKALRRLQGCIVDGHKLEVK 806
Query: 661 RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
S R + A RK V KQ SKILVRNIPFQA E+ ELF FGELK VRLPKK
Sbjct: 807 ISERAVRP-AVKSSRKKQTVKKQKTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKK 865
Query: 721 MVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRY 780
M G+G HRGFGFV+F+TK +AK+A ALC STHLYGRRLVLEWA+ + VE +R+RT +
Sbjct: 866 MAGTGSHRGFGFVDFLTKQDAKKAFNALCHSTHLYGRRLVLEWADTEETVEALRRRTADH 925
Query: 781 F 781
F
Sbjct: 926 F 926
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 141/289 (48%), Gaps = 39/289 (13%)
Query: 147 FSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAP 206
SD L K V K + E+E + E+ D E + TK + +
Sbjct: 217 LSDMDYLKSK-VVKDSSSYSSSSTEEETDYEEVEEESKNEEDSGITENIDTHTKKRRKSK 275
Query: 207 ---SDPSVPPVSK--APVHKRQY--------HTIVVKNLPAGVKKKDLKAYFKPL-PLA- 251
++ P K + + K Q HT+ ++ P V ++ ++ +F PL PLA
Sbjct: 276 PQEAEQETPAEKKKGSTLEKNQVSSAEASTPHTVKLRGAPLNVTEQKIREFFSPLKPLAI 335
Query: 252 ----SVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDN 307
+ + G ++ K E KAL + K + G+ + + +
Sbjct: 336 RMGKNTQGKSTGFIFVDLKSEAEVQKALKRKKEYIGGQYVEVSRC--------------- 380
Query: 308 NNASMENIKAKH----WKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL 363
NA E + AK W+ + + ED++ESGR+FVRNL +T TE+DL K+F KYGPL
Sbjct: 381 ENAPKETVTAKTDDQPWQRMKRDDEEEEDLSESGRLFVRNLPFTSTEEDLEKIFSKYGPL 440
Query: 364 AEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
+E+ PID+ T K KGFA +T+++PEHA +AY +DG VF GRM+HL+P
Sbjct: 441 SEIHFPIDRLTKKPKGFAFITYMIPEHAVKAYAEMDGQVFQGRMMHLLP 489
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 85/134 (63%), Gaps = 6/134 (4%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++ + F GT+TD LK+T +GKFR+F FIGY ED+AQAAL++FN +++ +SR+
Sbjct: 13 MKEDRFRKLFAAFGTLTDCCLKFTKDGKFRKFGFIGYKSEDEAQAALNHFNRSFIDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQK-----LHNIAPKQDLKPEHTKD-SKPGKKSK 142
VE C + GD +KPK+WSK++ A +K + AP K + K+ S+ K+ +
Sbjct: 73 TVELCKSFGDPSKPKAWSKHSQKVPALEKQPEKPMTIAAPASTKKDKKKKNPSENLKELE 132
Query: 143 NDPTFSDFLQLHGK 156
D TF +FL +H K
Sbjct: 133 EDKTFQEFLVVHQK 146
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 139/329 (42%), Gaps = 47/329 (14%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYF-KPLPLASVRTTFLGM-AYIGFKDEKNCNKALNKNK 279
R I+VKNLPA +L+A F K L V G+ A + F + +A K
Sbjct: 596 RSKTVILVKNLPATTSTAELEAVFGKHGSLGRVLLPTGGITAIVEFLEPIEAKQAFTK-L 654
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHW---------KSQEDSVQFA 330
++ K + +Y S A N ++E + S+E S Q
Sbjct: 655 AYSKFHSVPLYLEWAPMGVFSSPALQKKNVEALEKEGEERLVPDGDTTVKGSEETSAQDE 714
Query: 331 EDIAE--------SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----T 377
E+ E +F++NL++T TE L + F K G + I K+ DK +
Sbjct: 715 EEDEEEDEEESIPGCTLFIKNLNFTTTEGTLKETFSKVGAVKSCT--ISKKKDKAGTLLS 772
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
GF V + PE A +A + L G + G L + K +E V V S RK
Sbjct: 773 MGFGFVEYKKPESAQKALRRLQGCIVDGHKLEV-----KISERAVRPAVK---SSRKKQT 824
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEF 490
+ ++ ILV+N+P++ +++ LF FG+L V +P + G V+F
Sbjct: 825 VKKQKTSK----ILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDF 880
Query: 491 LQKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
L K AK AFN+L + T L LEWA
Sbjct: 881 LTKQDAKKAFNALCHSTHLYGRRLVLEWA 909
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 33/226 (14%)
Query: 530 SKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLN 589
+K + K K +E +E EKK+ + E NQ V E P T+ ++
Sbjct: 268 TKKRRKSKPQEAEQETPAEKKKGSTLEKNQ---------VSSAEASTPH---TVKLRGAP 315
Query: 590 FNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQN 649
N TE IR F P+A + + + KS G+ FV + + +ALK +
Sbjct: 316 LNVTEQKIREFFSPLKPLA-IRMGKNTQGKS------TGFIFVDLKSEAEVQKALK-RKK 367
Query: 650 SSLDEHQIELKRSNRNLESEATT----------VKRKSSNVAKQTGS-KILVRNIPFQAK 698
+ +E+ R N E T +KR + S ++ VRN+PF +
Sbjct: 368 EYIGGQYVEVSRCE-NAPKETVTAKTDDQPWQRMKRDDEEEEDLSESGRLFVRNLPFTST 426
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ ++E++F +G L + P + + +GF F+ ++ A +A
Sbjct: 427 EEDLEKIFSKYGPLSEIHFPIDRL-TKKPKGFAFITYMIPEHAVKA 471
>gi|114051910|ref|NP_001039420.1| probable RNA-binding protein 19 [Bos taurus]
gi|88954099|gb|AAI14030.1| RNA binding motif protein 19 [Bos taurus]
Length = 920
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 176/357 (49%), Positives = 234/357 (65%), Gaps = 14/357 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 535 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGITAIVEFLEPL 594
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFA----------EAKEKSKGKEKEKNEEEGEE 544
+A+ AF LAY+KF VPLYLEWAP GVF+ +A + G ++ + E +GE
Sbjct: 595 EARKAFRHLAYSKFHHVPLYLEWAPMGVFSSPIPQKEEPQDAPAEPAGTDRMEPETDGET 654
Query: 545 GEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC 604
E E+ + A D + E EE EE+EE E P TL+IKNLNF++TE++++ F K
Sbjct: 655 PEGEQPTDRAAHDASAKM-EEEEEEEEEEEEESLPGCTLFIKNLNFDTTEETLKGVFSKV 713
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 714 GAVKSCSISKKKN--KAGALLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 771
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK+ G+
Sbjct: 772 ATKP-ALTSARKKQAPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGT 830
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 831 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVSLPALRRKTAEHF 887
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 106/186 (56%), Gaps = 18/186 (9%)
Query: 234 AGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQL 287
A KK++ + PL ++R G ++ F E+ KAL N+ + G+ +
Sbjct: 264 AAPAKKNVMEFLAPLKPVAIRIVRNAHGNKTGYVFVDFSSEEEVRKALKCNREYMGGRYI 323
Query: 288 NIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSY 346
+++ AK A ++N AK W+ + + ED+A+SGR+FVRNL Y
Sbjct: 324 EVFRERNIPVAK----------APLKN-GAKPWQGRTLGEHEEEEDLADSGRLFVRNLPY 372
Query: 347 TVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGR 406
T +E+DL KLF +YGP++E+ PID T K KGFA VTF+ PEHA +AY +DG VF GR
Sbjct: 373 TSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGR 432
Query: 407 MLHLIP 412
MLH++P
Sbjct: 433 MLHVLP 438
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 45/202 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I K+ +K + GF V + PE A +
Sbjct: 692 LFIKNLNFDTTEETLKGVFSKVGAVKSC--SISKKKNKAGALLSMGFGFVEYRKPEQAQK 749
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER + AR K+
Sbjct: 750 ALKQLQGHV-------------------VDGHKLEVRISERATKP--ALTSARKKQAPRK 788
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 789 QTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRGFGFVDFLTKQDAK 848
Query: 498 AAFNSLAY-TKFKEVPLYLEWA 518
AFN+L + T L LEWA
Sbjct: 849 RAFNALCHSTHLYGRRLVLEWA 870
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQTAL 59
>gi|426374260|ref|XP_004053996.1| PREDICTED: probable RNA-binding protein 19 [Gorilla gorilla
gorilla]
Length = 960
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 178/357 (49%), Positives = 233/357 (65%), Gaps = 13/357 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 574 LDSFSQAAAERSKTVILVKNLPAGTLVAELQETFGHFGSLGRVLLPEGGITAIVEFLEPL 633
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSK------GKEKEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K + EK+ E E +G
Sbjct: 634 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDG 693
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKC 604
E + +N EE ++EE EE+EE E P TL+IKNLNF++TE+ ++ F K
Sbjct: 694 ETPEDKNPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKV 753
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 754 GTVKSCSISKKKN--KAGALLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 811
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+
Sbjct: 812 ATKP-AMTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGT 870
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHF 927
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 224/479 (46%), Gaps = 109/479 (22%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ A +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 73 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSTTPEIKKDEKKKKVAGQLEKLK 128
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEENEDES 180
D F +FL +H K S L + G+E EEE E
Sbjct: 129 EDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGED 188
Query: 181 NNQIA--------HADISDMEYLKLKT--------------------------------- 199
+ A ++SDM+YLK K
Sbjct: 189 LEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSS 248
Query: 200 -----KSKDT--------APSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
+ +D+ P+ PP + A P ++++ HT+ ++ P V +K
Sbjct: 249 ATPVLQERDSKGAGQEQGMPAGKKRPPEAGAETEKPANQKEPTTCHTVKLRGAPFNVTEK 308
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ +AL N+ + G+ + +++
Sbjct: 309 NVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFR-- 366
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDL 353
+ N GA + + I + ED+AESGR+FVRNL YT +E+DL
Sbjct: 367 EKNVPTTKGAPKNTTRSWQGRILG--------ENEEEEDLAESGRLFVRNLPYTSSEEDL 418
Query: 354 TKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
KLF KYGPL+E+ PID T K KGFA +TF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 419 EKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLP 477
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 45/210 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE A +
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAGALLSMGFGFVEYRKPEQAQK 789
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER + AR K++
Sbjct: 790 ALKQLQGHV-------------------VDGHKLEVRISERATKP--AMTSARKKQVPRK 828
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 829 QTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAK 888
Query: 498 AAFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 889 RAFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 38/233 (16%)
Query: 540 EEGEEGEEEKKENTA---EEDN-----QQGVPE-----VEENVEEDE---EREPEPDTTL 583
+EG E EEE T E D+ +QG+P E E ++ ++EP T+
Sbjct: 237 DEGSEAEEEDSSATPVLQERDSKGAGQEQGMPAGKKRPPEAGAETEKPANQKEPTTCHTV 296
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE ++ P+A V K+ GY FV F E + QA
Sbjct: 297 KLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYIFVDFSNEEEVKQA 349
Query: 644 LK------------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
LK V + ++ + K + R+ + + ++A+ ++ VR
Sbjct: 350 LKCNREYMGGRYIEVFREKNVPTTKGAPKNTTRSWQGRILGENEEEEDLAE--SGRLFVR 407
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
N+P+ + + ++E+LF +G L + P + + +GF F+ F+ A +A
Sbjct: 408 NLPYTSSEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFITFMFPEHAVKA 459
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 172/440 (39%), Gaps = 96/440 (21%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAY---- 395
+R + VTE ++ + PL V + I + K G+ V F E QA
Sbjct: 298 LRGAPFNVTEKNVMEFL---APLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNR 354
Query: 396 QHLDGT---VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+++ G VF + + G PK + G++ L + + + V
Sbjct: 355 EYMGGRYIEVFREKNVPTTKGAPKNTTRSWQGRI--------LGENEEEEDLAESGRLFV 406
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYT 506
+NLPY + DL+ LF +G L + P +T + F+ A A++ +
Sbjct: 407 RNLPYTSSEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQ 466
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSK--GKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
F+ L++ P + EA E + G K ++E ++ K N+A N
Sbjct: 467 VFQGRMLHV--LPSTIKKEASEDASALGSSSYKKKKEAQD-----KANSASSHNW----- 514
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
TL+ + N+ D+I + + + T ++ D ++ G
Sbjct: 515 ----------------NTLF---MGPNAVADAIAQKY-------NATKSQVFDHETKGSV 548
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
A++V +L E Q+ ++ R L ++ S A+++
Sbjct: 549 ------------------AVRV----ALGETQL-VQEVRRFLIDNGVSLDSFSQAAAERS 585
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ ILV+N+P +E++E F FG L V LP+ + + VEF+ EA++A
Sbjct: 586 KTVILVKNLPAGTLVAELQETFGHFGSLGRVLLPEGGITA-------IVEFLEPLEARKA 638
Query: 745 MKALCQSTHLYGRRLVLEWA 764
+ L S + L LEWA
Sbjct: 639 FRHLAYS-KFHHVPLYLEWA 657
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAQ 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|195589101|ref|XP_002084294.1| GD14198 [Drosophila simulans]
gi|194196303|gb|EDX09879.1| GD14198 [Drosophila simulans]
Length = 778
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/352 (46%), Positives = 238/352 (67%), Gaps = 10/352 (2%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+LDAF++ + RS +IL KNLP T +++ +F FG +GR+++PP G+T L+E+
Sbjct: 398 RLDAFDEPAKKRSNTVILAKNLPAATEISEITPIFSRFGPIGRIVLPPSGVTALIEYCDP 457
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+A+ AF LAY+KFK PLYLEWAPE VF+ K+ E + E + EE K E
Sbjct: 458 LEARQAFKKLAYSKFKNAPLYLEWAPEQVFS----KTLSGEPVIPKSEPKPKEEAKPEEK 513
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
++ + E E++ ED + EPEP+TTL+++NLNF + + ++ +HF+ G I +V +A
Sbjct: 514 PIVNDVKA--EEEDSRAEDADDEPEPNTTLFLRNLNFKTVQKTVEKHFRHLGSIHTVEIA 571
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT- 672
+++DP++P +F S+GYGF+QF ALK LQ + +D + +ELKRS+R L+++
Sbjct: 572 KRRDPENPREFKSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVELKRSDRVLKTQDNDG 631
Query: 673 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK-MVGSGLHRGFG 731
+R+ ++ KQTG+KILVRNIPFQA+ EV ++FKAFGEL+ +R+PKK G HRGFG
Sbjct: 632 AQRRLASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFG 691
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN--VEDIRKRTNRYF 781
FV++++K EAKRA AL STHLYGRRLVLEW+ DN VE++RKRT F
Sbjct: 692 FVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSANDDNQDVEELRKRTAAKF 743
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/261 (41%), Positives = 155/261 (59%), Gaps = 19/261 (7%)
Query: 176 NEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYH---------- 225
E+E+ + I H D + ++ +++ +S S+ SK K Q
Sbjct: 51 TEEEAQSAIRHFDNTCIQTSRVRVESCAALGSEDKPQSWSKYAKDKTQSQGRINQIXELF 110
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVR--TTFLGMAYIGFKDEKNCNKALNKNKSFWK 283
TI + N+P K++++ +FKPL SVR + G Y+GFK EK+ K + KNKSF K
Sbjct: 111 TIKIHNVPYNTKRQEVLKFFKPLKPYSVRLPSKVHGFCYVGFKTEKDMAKGMLKNKSFIK 170
Query: 284 GKQLNIYKYSKDNSA-KYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVR 342
GKQ+ +++ N K S + A+++ AK WK Q+DS+ +DI+ESGRIF R
Sbjct: 171 GKQVFFSDFTEKNKVTKASKSGQPLAPAAVDAGNAK-WKHQQDSLSKEDDISESGRIFFR 229
Query: 343 NLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTV 402
NL+YT TE+DL KLFE++GP+ EV LP+DK T K KGF VT++MPEHA +A+ LDGT
Sbjct: 230 NLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNTLDGTD 289
Query: 403 FLGRMLHLIPGK-----PKEN 418
F GR+LHL+P K PKE+
Sbjct: 290 FHGRLLHLLPSKDIEKNPKED 310
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 73/105 (69%), Gaps = 12/105 (11%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+++L+ F +GT+TD+QLKYT +GKFR+F F+GY E++AQ+A+ +F+NT + +SR+
Sbjct: 13 ITEDKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGYSTEEEAQSAIRHFDNTCIQTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQ------------KLHNI 121
+VE C+ LG KP+SWSKYA D + Q K+HN+
Sbjct: 73 RVESCAALGSEDKPQSWSKYAKDKTQSQGRINQIXELFTIKIHNV 117
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 151/341 (44%), Gaps = 61/341 (17%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKAL 275
P KR I+ KNLPA + ++ F P+ + G+ A I + D +A
Sbjct: 405 PAKKRSNTVILAKNLPAATEISEITPIFSRFGPIGRIVLPPSGVTALIEYCDPLEARQAF 464
Query: 276 NKNKSFWKGKQLNIY-------KYSKDNSA---------KYSGAADDNNNASMENIKAKH 319
K ++ K K +Y +SK S K A + ++KA+
Sbjct: 465 -KKLAYSKFKNAPLYLEWAPEQVFSKTLSGEPVIPKSEPKPKEEAKPEEKPIVNDVKAE- 522
Query: 320 WKSQEDS-VQFAEDIAE-SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDK 372
+EDS + A+D E + +F+RNL++ + + K F G + V + P +
Sbjct: 523 ---EEDSRAEDADDEPEPNTTLFLRNLNFKTVQKTVEKHFRHLGSIHTVEIAKRRDPENP 579
Query: 373 ETDKTKGFALVTF---LMPEHATQAYQ--HLDGT-VFLGRMLHLIPGKPKENEGNVDGKV 426
K+ G+ + F + EHA + Q H+DG V L R ++ K ++N+G
Sbjct: 580 REFKSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVELKRSDRVL--KTQDNDG------ 631
Query: 427 HCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT- 485
++R+L + + + ILV+N+P++ +++ +F+ FG+L + +P T
Sbjct: 632 ----AQRRLASQKKQTGTK----ILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTG 683
Query: 486 -------GLVEFLQKNQAKAAFNSL-AYTKFKEVPLYLEWA 518
G V+++ K +AK AF++L A T L LEW+
Sbjct: 684 EDAHRGFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWS 724
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 121/323 (37%), Gaps = 70/323 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
I +NL Y T DL+ LFE FG + V +P +T G V ++ A AFN+L
Sbjct: 226 IFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNTL 285
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
T F L+L K+ EKN KE+ E D
Sbjct: 286 DGTDFHGRLLHL--------------LPSKDIEKN----------PKEDLDENDASLSFK 321
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E + + ++P TL+ L N+ + + + FK S +
Sbjct: 322 EKKALKLKKNAQKPIGWNTLF---LGANAVAEILAKQFKT----------------SKER 362
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
L G R +L + V IE+KR LE E + K+
Sbjct: 363 ILDTSDGGSSAAVRLALGETQVV----------IEMKRF---LEEEGVRLDAFDEPAKKR 409
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ + IL +N+P + SE+ +F FG + + LP V + +E+ EA++
Sbjct: 410 SNTVILAKNLPAATEISEITPIFSRFGPIGRIVLPPSGVTA-------LIEYCDPLEARQ 462
Query: 744 AMKALCQSTHLYGRRLVLEWAEE 766
A K L S L LEWA E
Sbjct: 463 AFKKLAYS-KFKNAPLYLEWAPE 484
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 135/339 (39%), Gaps = 61/339 (17%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
RI V+ L +TED L ++F G + ++ L + K + F V + E A A +H
Sbjct: 3 RIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPD-GKFRQFCFVGYSTEEEAQSAIRH 61
Query: 398 LDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCI---SERKLDAFNQVVEARSK---RI-- 449
D T + +V C SE K ++++ + +++ RI
Sbjct: 62 FDNTCIQTSRV----------------RVESCAALGSEDKPQSWSKYAKDKTQSQGRINQ 105
Query: 450 ------ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGL--VEF-LQKNQAKAAF 500
I + N+PY T ++ F+P L P + G V F +K+ AK
Sbjct: 106 IXELFTIKIHNVPYNTKRQEVLKFFKPLKPYSVRL--PSKVHGFCYVGFKTEKDMAKGML 163
Query: 501 NSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQ 560
+ ++ K K+V F++ EK+K + K+ + + A+ +QQ
Sbjct: 164 KNKSFIKGKQV----------FFSDFTEKNKVTKASKSGQPLAPAAVDA--GNAKWKHQQ 211
Query: 561 GVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
E+++ E ++ +NL + +TE+ +R+ F++ GP+ V + K +
Sbjct: 212 DSLSKEDDISESGR--------IFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRK 263
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
G+G V + E +A L + + L
Sbjct: 264 -----IKGFGTVTYMMPEHALKAFNTLDGTDFHGRLLHL 297
>gi|195326391|ref|XP_002029912.1| GM25167 [Drosophila sechellia]
gi|194118855|gb|EDW40898.1| GM25167 [Drosophila sechellia]
Length = 917
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 240/356 (67%), Gaps = 19/356 (5%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+LDAF++ + RS +IL KNLP T +++ +F FG +GR+++PP G+T L+E+
Sbjct: 538 RLDAFDEPAKKRSNTVILAKNLPAATEISEITPIFSRFGPIGRIVLPPSGVTALIEYCDP 597
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK--- 550
+A+ AF LAY+KFK PLYLEWAPE VF+ K S K+E + EE + E+K
Sbjct: 598 LEARQAFKKLAYSKFKNAPLYLEWAPEQVFS--KTLSGEPVIPKSEPKPEEAKPEEKPIV 655
Query: 551 -ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIAS 609
+ AEE++ + ED + EPEP+TTL+++NLNF + ++++ +HF+ G I +
Sbjct: 656 NDVKAEEEDSRA---------EDADDEPEPNTTLFLRNLNFKTVQETVEKHFRHLGSIHT 706
Query: 610 VTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESE 669
V +A+++DP++P +F S+GYGF+QF ALK LQ + +D + +ELKRS+R L+++
Sbjct: 707 VEIAKRRDPENPREFKSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVELKRSDRVLKTQ 766
Query: 670 ATT-VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK-MVGSGLH 727
+R+ ++ KQTG+KILVRNIPFQA+ EV ++ KAFGEL+ +R+PKK G H
Sbjct: 767 DNDGAQRRLASQKKQTGTKILVRNIPFQAQYREVRDILKAFGELRSLRIPKKATTGEDAH 826
Query: 728 RGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN--VEDIRKRTNRYF 781
RGFGFV++++K EAKRA AL STHLYGRRLVLEW+ DN VE++RKRT F
Sbjct: 827 RGFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSANDDNQDVEELRKRTAAKF 882
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 253/443 (57%), Gaps = 58/443 (13%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+++L+ F +GT+TD+QLKYT +GKFR+F F+GY E++AQ+A+ +F+NT + +SR+
Sbjct: 13 ITEDKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGYSTEEEAQSAIRHFDNTCIQTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQ-------------DLKPEHTKDS 135
+VE C+ LG KP+SWSKYA DS + L + K+ K + K
Sbjct: 73 RVESCAALGSEDKPQSWSKYAKDSK--KNLDKLKEKEREAADKAKESEKKKKKEKVDKVD 130
Query: 136 KPGKKSKNDPTFSDFLQLH-------GKDVS---------------KLLPLSNKD-GEEK 172
+ + K+DP F +FL+ H G D+ K + D G +
Sbjct: 131 QILSRHKDDPEFQEFLEAHDKSRTLWGNDLGINKNKDDDEEDEEEQKESRVGRDDSGVDA 190
Query: 173 EEENEDESN---------NQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQ 223
+ +ED SN +++A ISD+EY+K + P+ +KA +
Sbjct: 191 DAGDEDSSNDEADEEEDTDKLAEKPISDLEYMKSLMATTSGEPTAKKP--KAKADKSNLE 248
Query: 224 YHTIVVKNLPAGVKKKDLKAYFKPLPLASVR--TTFLGMAYIGFKDEKNCNKALNKNKSF 281
TI + N+P K++++ +FKPL SVR + G Y+GFK EK+ K + KNKSF
Sbjct: 249 LFTIKIHNVPYNTKRQEVLKFFKPLKPYSVRLPSKVHGFCYVGFKTEKDMAKGMLKNKSF 308
Query: 282 WKGKQLNIYKYSKDNSA-KYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIF 340
KGKQ+ +++ N K S + A+++ AK WK Q+DS+ +DI+ESGRIF
Sbjct: 309 IKGKQVFFSDFTEKNKVTKASKSGQPLAPAAVDAGNAK-WKHQQDSLSKEDDISESGRIF 367
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
RNL+YT TE+DL KLFE++GP+ EV LP+DK T K KGF VT++MPEHA +A+ LDG
Sbjct: 368 FRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNTLDG 427
Query: 401 TVFLGRMLHLIPGK-----PKEN 418
T F GR+LHL+P K PKE+
Sbjct: 428 TDFHGRLLHLLPSKDIEKNPKED 450
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 153/340 (45%), Gaps = 60/340 (17%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKAL 275
P KR I+ KNLPA + ++ F P+ + G+ A I + D +A
Sbjct: 545 PAKKRSNTVILAKNLPAATEISEITPIFSRFGPIGRIVLPPSGVTALIEYCDPLEARQAF 604
Query: 276 NKNKSFWKGKQLNIY-KYSKDN--SAKYSG------------AADDNNNASMENIKAKHW 320
K ++ K K +Y +++ + S SG A + ++KA+
Sbjct: 605 -KKLAYSKFKNAPLYLEWAPEQVFSKTLSGEPVIPKSEPKPEEAKPEEKPIVNDVKAE-- 661
Query: 321 KSQEDS-VQFAEDIAE-SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKE 373
+EDS + A+D E + +F+RNL++ ++ + K F G + V + P +
Sbjct: 662 --EEDSRAEDADDEPEPNTTLFLRNLNFKTVQETVEKHFRHLGSIHTVEIAKRRDPENPR 719
Query: 374 TDKTKGFALVTF---LMPEHATQAYQ--HLDGT-VFLGRMLHLIPGKPKENEGNVDGKVH 427
K+ G+ + F + EHA + Q H+DG V L R ++ K ++N+G
Sbjct: 720 EFKSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVELKRSDRVL--KTQDNDG------- 770
Query: 428 CCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-- 485
++R+L + + + ILV+N+P++ +++ + + FG+L + +P T
Sbjct: 771 ---AQRRLASQKKQTGTK----ILVRNIPFQAQYREVRDILKAFGELRSLRIPKKATTGE 823
Query: 486 ------GLVEFLQKNQAKAAFNSL-AYTKFKEVPLYLEWA 518
G V+++ K +AK AF++L A T L LEW+
Sbjct: 824 DAHRGFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWS 863
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 121/323 (37%), Gaps = 70/323 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
I +NL Y T DL+ LFE FG + V +P +T G V ++ A AFN+L
Sbjct: 366 IFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNTL 425
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
T F L+L K+ EKN KE+ E D
Sbjct: 426 DGTDFHGRLLHL--------------LPSKDIEKN----------PKEDLDENDASLSFK 461
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E + + ++P TL+ L N+ + + + FK S +
Sbjct: 462 EKKALKLKKNAQKPIGWNTLF---LGANAVAEILAKQFKT----------------SKER 502
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
L G R +L + V IE+KR LE E + K+
Sbjct: 503 ILDTSDGGSSAAVRLALGETQVV----------IEMKRF---LEEEGVRLDAFDEPAKKR 549
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ + IL +N+P + SE+ +F FG + + LP V + +E+ EA++
Sbjct: 550 SNTVILAKNLPAATEISEITPIFSRFGPIGRIVLPPSGVTA-------LIEYCDPLEARQ 602
Query: 744 AMKALCQSTHLYGRRLVLEWAEE 766
A K L S L LEWA E
Sbjct: 603 AFKKLAYS-KFKNAPLYLEWAPE 624
>gi|390468249|ref|XP_002753088.2| PREDICTED: probable RNA-binding protein 19 [Callithrix jacchus]
Length = 1066
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/357 (49%), Positives = 231/357 (64%), Gaps = 13/357 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 680 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGITAIVEFLEPL 739
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSK--------GKEKEKNE-EEGEEG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K EK++ E E G
Sbjct: 740 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKEPQDAPPEPTEKDQAEPETASNG 799
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKC 604
E + EN EE ++EE EE+EE E TL+IKNLNF++TE+ ++ F K
Sbjct: 800 ETPEDENPTEEGADNCSAKMEEEEEEEEEEEESLSGCTLFIKNLNFDTTEEKLKEVFSKV 859
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 860 GTVKSCSISKKKN--KAGALLSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKLEVRISER 917
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+
Sbjct: 918 ATKP-AVTSARKKQIPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGT 976
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 977 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHF 1033
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/480 (32%), Positives = 227/480 (47%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL +FN +++ +SRI
Sbjct: 119 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKTEEEAQKALKHFNKSFIDTSRI 178
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD TKP++WSK+A S ++ PK PE KD K +K K
Sbjct: 179 TVEFCKSFGDPTKPRAWSKHAQKPSQPEQ----PPKDSATPEIKKDEKKKKVAGQLEKLK 234
Query: 143 NDPTFSDFLQLH------------GKDV----------SKLLPLSNKDGEEKEEEN---- 176
D F +FL +H G DV S L + G+E EEE
Sbjct: 235 EDTEFQEFLSVHQRRVQAATWVNDGLDVKPSRGKSKPASDYLNFDSDSGQESEEEGAGED 294
Query: 177 -EDESNNQIAHA---DISDMEYLK------------------------------------ 196
E+E+N + A ++SDM+YLK
Sbjct: 295 LEEEANLERKAAVQKELSDMDYLKSKMVKSGSSSSSEEEESEDEAVHCDEGSEVEEEGSS 354
Query: 197 ----LKTKSKDTAPSDPSVPPVSKAPVHKR-------------QYHTIVVKNLPAGVKKK 239
L+ + + +P K P+ R HT+ ++ P V +K
Sbjct: 355 STQALQERDGKGVGQEQGMPAGKKRPLDTRAETEKPANQKEPTTCHTVKLRGAPFNVTEK 414
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F +E+ KAL N+ + G+ + +++
Sbjct: 415 NVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKKALKCNREYMGGRYIEVFREK 474
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ K + AK W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 475 NVTTTK-----------GLPKNSAKSWQGRMLGENEEEEDLAESGRLFVRNLPYTSTEED 523
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 524 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSEVDGQVFQGRMLHVLP 583
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 43/209 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE A +
Sbjct: 838 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAGALLSMGFGFVEYRKPEQAQK 895
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI---- 449
A + L G H++ G K+ ISER V AR K+I
Sbjct: 896 ALKQLQG--------HIVDGH----------KLEVRISERATKP--AVTSARKKQIPRKQ 935
Query: 450 ----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKA 498
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 936 TTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKR 995
Query: 499 AFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 996 AFNALCHSTHLYGRRLVLEWADSEVTLQA 1024
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 30/187 (16%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
++EP T+ ++ FN TE ++ P+A V K+ GY FV
Sbjct: 393 QKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYIFVD 445
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL---- 689
F E + +ALK + IE+ R E TT K N AK ++L
Sbjct: 446 FSNEEEVKKALKC-NREYMGGRYIEVFR-----EKNVTTTKGLPKNSAKSWQGRMLGENE 499
Query: 690 ------------VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
VRN+P+ + + ++E+LF +G L + P + + +GF FV F+
Sbjct: 500 EEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFVTFMF 558
Query: 738 KNEAKRA 744
A +A
Sbjct: 559 PEHAVKA 565
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 658 ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
E KR R L S V +S S+++V+N+P K+ +LF AFG L L
Sbjct: 81 ECKRQARPLRSYCP-VALESKQWGPCAMSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL 139
Query: 718 PKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
K G R FGF+ F T+ EA++A+K
Sbjct: 140 --KFTKDGKFRKFGFIGFKTEEEAQKALK 166
>gi|426247328|ref|XP_004017438.1| PREDICTED: probable RNA-binding protein 19 [Ovis aries]
Length = 916
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/357 (48%), Positives = 233/357 (65%), Gaps = 15/357 (4%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 532 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGITAIVEFLEPL 591
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFA----------EAKEKSKGKEKEKNEEEGEE 544
+A+ AF LAY+KF VPLYLEWAP GVF+ +A + G ++ + E + E
Sbjct: 592 EARKAFRHLAYSKFHHVPLYLEWAPMGVFSSPTPQKEQPQDAPVEPAGTDRMEPETDAET 651
Query: 545 GEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC 604
E E+ + A D + EE EE+EE E P TL+IKNLNF++TE++++ F K
Sbjct: 652 PECEQPMDRAAHDASAKM--EEEEEEEEEEEESLPGCTLFIKNLNFDTTEETLKGVFSKV 709
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 710 GAVKSCSISKKKN--KAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 767
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK+ G+
Sbjct: 768 ATKP-ALTAARKKQAPRKQTTSKILVRNIPFQADSHEIRELFSTFGELKTVRLPKKVTGT 826
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ +++ +R++T +F
Sbjct: 827 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVSLQALRRKTAEHF 883
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 107/186 (57%), Gaps = 18/186 (9%)
Query: 234 AGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQL 287
A KK++ + PL ++R G ++ F E+ KAL N+ + G+ +
Sbjct: 261 AAPAKKNVMEFLAPLKPVAIRIVRNAHGNKTGYVFVDFSSEEEVRKALKCNREYMGGRYI 320
Query: 288 NIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSY 346
+++ +AK A ++N AK W+ + + ED+A+SGR+FVRNL Y
Sbjct: 321 EVFRERNVPAAK----------APLKN-GAKPWQGRTLGEHEEEEDLADSGRLFVRNLPY 369
Query: 347 TVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGR 406
T +E+DL KLF +YGPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF GR
Sbjct: 370 TSSEEDLEKLFSRYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGR 429
Query: 407 MLHLIP 412
MLH++P
Sbjct: 430 MLHVLP 435
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 110/249 (44%), Gaps = 57/249 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I K+ +K + GF V + PE A +
Sbjct: 688 LFIKNLNFDTTEETLKGVFSKVGAVKSC--SISKKKNKAGVLLSMGFGFVEYRKPEQAQK 745
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER + AR K+
Sbjct: 746 ALKQLQGHV-------------------VDGHKLEVRISERATKP--ALTAARKKQAPRK 784
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 785 QTTSKILVRNIPFQADSHEIRELFSTFGELKTVRLPKKVTGTGTHRGFGFVDFLTKQDAK 844
Query: 498 AAFNSLAY-TKFKEVPLYLEWAPEGV------------FAEAKEKSKGKEKEKNEEEGEE 544
AFN+L + T L LEWA V F E +K + ++ E+ E+
Sbjct: 845 RAFNALCHSTHLYGRRLVLEWADSEVSLQALRRKTAEHFHEPPKKKRSVVLDEILEQLED 904
Query: 545 GEEEKKENT 553
E++ KE T
Sbjct: 905 SEDDSKEQT 913
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQTAL 59
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT--- 684
GY FV F + E + +ALK + IE+ R RN+ + +K + +T
Sbjct: 292 GYVFVDFSSEEEVRKALKC-NREYMGGRYIEVFR-ERNVPAAKAPLKNGAKPWQGRTLGE 349
Query: 685 ---------GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
++ VRN+P+ + + ++E+LF +G L + P + + +GF FV F
Sbjct: 350 HEEEEDLADSGRLFVRNLPYTSSEEDLEKLFSRYGPLSELHYPIDSL-TKKPKGFAFVTF 408
Query: 736 ITKNEAKRA 744
+ A +A
Sbjct: 409 MFPEHAVKA 417
>gi|410976696|ref|XP_003994750.1| PREDICTED: probable RNA-binding protein 19 [Felis catus]
Length = 994
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 172/362 (47%), Positives = 225/362 (62%), Gaps = 24/362 (6%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P G+T +VEFL+
Sbjct: 567 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVTAIVEFLEPL 626
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY+K + VPLYLEWAP GVF+ S ++KE + EE E
Sbjct: 627 EARRAFRHLAYSKCRHVPLYLEWAPVGVFS----SSAPQKKEPRDPPAGPAEEGAAEPET 682
Query: 555 EEDNQQGVPEVEENVEEDEEREPE---------------PDTTLYIKNLNFNSTEDSIRR 599
DN+ PE E+ E E P P TL+IKNLNF +TE++++
Sbjct: 683 LPDNE--TPEGEKPTERGAEDAPAKEEEEEEEEEEEESPPGCTLFIKNLNFTTTEETLKE 740
Query: 600 HFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
F + G + S +V++KK+ G+ LSMG+GFV++ E +ALK LQ +D H++E+
Sbjct: 741 VFSRVGMVKSCSVSKKKN--KTGELLSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKLEV 798
Query: 660 KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK 719
+ S R + A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPK
Sbjct: 799 RISERATKP-ALTSARKKQVPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPK 857
Query: 720 KMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNR 779
KM G+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T
Sbjct: 858 KMSGTGSHRGFGFVDFLTKQDAKRAFHALCHSTHLYGRRLVLEWADSEVSLPALRRKTAE 917
Query: 780 YF 781
F
Sbjct: 918 RF 919
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 146/472 (30%), Positives = 225/472 (47%), Gaps = 102/472 (21%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F G +TD LK+T +GKFR+F FIG+ E++A++AL++FN +++ +SRI
Sbjct: 13 MKEERFRQLFASFGALTDCSLKFTKDGKFRKFGFIGFKSEEEARSALNHFNRSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQD-LKPEHTKDSKPGK------KS 141
VE C + GD TKP++WSK+A +S + N + QD + E KD K K K
Sbjct: 73 VVEFCKSFGDPTKPRAWSKHAQKTSQSK---NPSKGQDSISMEPKKDDKMKKVAGELEKL 129
Query: 142 KNDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEENEDE 179
K D F +FL +H G+ S L + G+E +EE E
Sbjct: 130 KKDAEFREFLSVHQKRTQTATWANDALDAEPSKGKGRPASDYLNFDSDSGQESDEEGPGE 189
Query: 180 SN--------NQIAHADISDMEYLKLKTKS------------------------------ 201
++SDM+YLK K +
Sbjct: 190 DPEEEGGREPRAAVQQELSDMDYLKSKMVTSESLSSSEEEGSEDEAVSCVDGSEAVRQDG 249
Query: 202 -------KDTAPSDPSVPPVSKAPVHKRQY-------HTIVVKNLPAGVKKKDLKAYFKP 247
+ APS P + A V K HT+ ++ P V +K++ + P
Sbjct: 250 GGRAAGPEQDAPSRDKRPGAAGAEVDKPATQKEPPTPHTVRLRGAPFNVTEKNVTEFLAP 309
Query: 248 LPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYS 301
L ++R G ++ F E+ +AL N+ + G+ + +++ +AK
Sbjct: 310 LRPVAIRIVRNAHGNKTGYIFVDFSSEEEVKQALKCNREYMGGRYIEVFREKNAPTAK-- 367
Query: 302 GAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
++N AK W + + ED+A+SGR+FVRNL Y+ TE+DL +LF ++
Sbjct: 368 --------GPLKN-SAKPWPGRTLGENEEEEDLADSGRLFVRNLPYSSTEEDLEQLFSRF 418
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
GPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 419 GPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLP 470
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-----KGFALVTFLMPEHATQ 393
+F++NL++T TE+ L ++F + G + + K+ +KT GF V + PE A +
Sbjct: 724 LFIKNLNFTTTEETLKEVFSRVGMVKSC--SVSKKKNKTGELLSMGFGFVEYRKPEQAQK 781
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + L G H++ G E + S RK QV ++ ILV+
Sbjct: 782 ALKQLQG--------HIVDGHKLEVRISERATKPALTSARK----KQVPRKQTTSKILVR 829
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAY- 505
N+P++ +++ LF FG+L V +P + G V+FL K AK AF++L +
Sbjct: 830 NIPFQADSREIRELFSTFGELKTVRLPKKMSGTGSHRGFGFVDFLTKQDAKRAFHALCHS 889
Query: 506 TKFKEVPLYLEWA 518
T L LEWA
Sbjct: 890 THLYGRRLVLEWA 902
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 30/187 (16%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
++EP T+ ++ FN TE ++ P+A V K+ GY FV
Sbjct: 280 QKEPPTPHTVRLRGAPFNVTEKNVTEFLAPLRPVAIRIVRNAHGNKT-------GYIFVD 332
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK----------- 682
F + E + QALK + IE+ R E A T K N AK
Sbjct: 333 FSSEEEVKQALKC-NREYMGGRYIEVFR-----EKNAPTAKGPLKNSAKPWPGRTLGENE 386
Query: 683 -----QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
++ VRN+P+ + + ++E+LF FG L + P + + +GF FV F+
Sbjct: 387 EEEDLADSGRLFVRNLPYSSTEEDLEQLFSRFGPLSELHYPIDSL-TKKPKGFAFVTFMF 445
Query: 738 KNEAKRA 744
A +A
Sbjct: 446 PEHAVKA 452
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF +FG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFASFGALTDCSL--KFTKDGKFRKFGFIGFKSEEEARSAL 59
Query: 746 KALCQSTHLYGRRLVLEWA 764
+S + R+V+E+
Sbjct: 60 NHFNRS-FIDTSRIVVEFC 77
>gi|417405465|gb|JAA49443.1| Putative rna-binding protein rrm superfamily [Desmodus rotundus]
Length = 968
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/354 (49%), Positives = 229/354 (64%), Gaps = 10/354 (2%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +IL KNLP TL +L+ +F FG LGRVL+P GIT +VEFL+
Sbjct: 576 LDSFSQAAAERSKTVILAKNLPAGTLAAELQEIFGRFGSLGRVLLPEGGITAIVEFLEPL 635
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEK---EKNEEEGEEGEEEKKE 551
+A+ AF LAY+KF VPLYLEWAP GVF+ + + KG + E E++ E E
Sbjct: 636 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSSSALQKKGAQDTPVEPAEKDTAEPETVPDS 695
Query: 552 NTAE--EDNQQGVPEVEENVEEDEEREPE--PDTTLYIKNLNFNSTEDSIRRHFKKCGPI 607
T E + + G VEE+EE E E P TL+IKNLNF++TE++++ F K G +
Sbjct: 696 ETMEPAKATEGGADASSSKVEEEEEEEEESLPGCTLFIKNLNFDTTEETLKGVFSKVGAV 755
Query: 608 ASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLE 667
S +++RK + G LSMG+GFV++ E +ALK LQ +D H++E++ S R +
Sbjct: 756 KSCSISRKTN--KAGALLSMGFGFVEYRKPEQAQKALKQLQGHVVDSHKLEVRISERATK 813
Query: 668 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 727
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G H
Sbjct: 814 P-ALTSTRKKQVPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMAGTGSH 872
Query: 728 RGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
RGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T F
Sbjct: 873 RGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAERF 926
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 152/489 (31%), Positives = 218/489 (44%), Gaps = 127/489 (25%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ K F GT+TD LK+T +GKFR+F FIG+ E++AQ AL++FN +++ +SRI
Sbjct: 13 MKEERFKQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQQALNHFNRSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKS------- 141
VE C + GD TKP++WSK+A QK P Q P KDS P +
Sbjct: 73 TVEFCKSFGDPTKPRAWSKHA------QK-----PSQSKPPPKDKDSVPPEAKKDKKKKS 121
Query: 142 -------KNDPTFSDFLQLHGK---------DVSKLLPLSNKDGEEKEEENEDESNNQIA 185
K D F +FL +H K D + P K + N D + Q +
Sbjct: 122 ASKLEKLKKDAEFQEFLSVHQKRTQAATWANDALDVEPSKGKSKPASDYLNFDSDSGQES 181
Query: 186 HA----------------------DISDMEYLK--------------------------- 196
++SDMEYLK
Sbjct: 182 EEEGAGEGSEEEDNGPEPKAAVWKELSDMEYLKSKVVRADSPCSSGEEESEDEAVNCDEG 241
Query: 197 -----------LKTKSKDTAPSDP--SVPPVSKAPVHKRQY-------------HTIVVK 230
L + +D DP P SK P R HT+ ++
Sbjct: 242 SEDEEEDLCSPLTQRDQDRTGPDPEQGTPSGSKKPQEARAKTEKPAAQREPTTPHTVKLR 301
Query: 231 NLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKG 284
P V +K++ + PL A++R G ++ F E+ KAL N+ + G
Sbjct: 302 GAPFNVTEKNVLEFLAPLKPAAIRIVRNAHGNKTGYVFVDFSSEEEVKKALKCNREYMGG 361
Query: 285 KQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRN 343
+ + +++ AK AK W+ + + ED+A+SGR+FVRN
Sbjct: 362 RYIEVFREQNVPIAK-----------GTLKTSAKPWQGRTLGENEEEEDLADSGRLFVRN 410
Query: 344 LSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVF 403
L YT TE+DL +LF K+GPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF
Sbjct: 411 LPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVF 470
Query: 404 LGRMLHLIP 412
GRMLH++P
Sbjct: 471 QGRMLHVLP 479
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 27/201 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I ++T+K + GF V + PE A +
Sbjct: 731 LFIKNLNFDTTEETLKGVFSKVGAVKSC--SISRKTNKAGALLSMGFGFVEYRKPEQAQK 788
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + L G H++ E + S RK QV ++ ILV+
Sbjct: 789 ALKQLQG--------HVVDSHKLEVRISERATKPALTSTRK----KQVPRKQTTSKILVR 836
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAY- 505
N+P++ +++ LF FG+L V +P + G V+FL K AK AFN+L +
Sbjct: 837 NIPFQADSREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKRAFNALCHS 896
Query: 506 TKFKEVPLYLEWAPEGVFAEA 526
T L LEWA V +A
Sbjct: 897 THLYGRRLVLEWADSEVTLQA 917
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 30/208 (14%)
Query: 557 DNQQGVPEVEENVEEDE--------EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
D +QG P + +E +REP T+ ++ FN TE ++ P A
Sbjct: 264 DPEQGTPSGSKKPQEARAKTEKPAAQREPTTPHTVKLRGAPFNVTEKNVLEFLAPLKPAA 323
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES 668
V K+ GY FV F + E + +ALK + IE+ R +N+
Sbjct: 324 IRIVRNAHGNKT-------GYVFVDFSSEEEVKKALKC-NREYMGGRYIEVFR-EQNVPI 374
Query: 669 EATTVKRKSSNVAKQT------------GSKILVRNIPFQAKQSEVEELFKAFGELKFVR 716
T+K + +T ++ VRN+P+ + + ++E+LF FG L +
Sbjct: 375 AKGTLKTSAKPWQGRTLGENEEEEDLADSGRLFVRNLPYTSTEEDLEQLFSKFGPLSELH 434
Query: 717 LPKKMVGSGLHRGFGFVEFITKNEAKRA 744
P + + +GF FV F+ A +A
Sbjct: 435 YPIDSL-TKKPKGFAFVTFMFPEHAVKA 461
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ ++LF AFG L L K G R FGF+ F ++ EA++A+
Sbjct: 2 SRLIVKNLPNGMKEERFKQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQQAL 59
>gi|195439120|ref|XP_002067479.1| GK16446 [Drosophila willistoni]
gi|194163564|gb|EDW78465.1| GK16446 [Drosophila willistoni]
Length = 929
Score = 311 bits (798), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 161/352 (45%), Positives = 232/352 (65%), Gaps = 17/352 (4%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+L AF+ V + RSK +I+ KNLP T ++L +F +G +GR+++PP G+T L+E+
Sbjct: 552 RLSAFDGVNQKRSKTVIVAKNLPAGTEVSELSPVFSRYGPIGRIVLPPSGVTALIEYCDA 611
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
++A+ AF LAY+KFK+ PL+LEWAP+ F + K + + E E + K T
Sbjct: 612 SEARQAFKKLAYSKFKDAPLFLEWAPDETFTVSLNGEAIIPKSEPKLEPEPEPAKGKGKT 671
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
E V ED + EPEP+TT++++NLNF + ++++ HF+ G I +V +A
Sbjct: 672 -------------EPVAEDADDEPEPETTIFLRNLNFKTVQETVWEHFRHLGTIHTVEIA 718
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES-EATT 672
R+ DP++P S+GYGF+QF ALK +Q +++D + +ELKRS+R L++ E +
Sbjct: 719 RRADPQNPRHSTSLGYGFIQFKKHSVAENALKNMQMTTIDGNSVELKRSDRVLKTQEQES 778
Query: 673 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFG 731
+R+ + KQTG+KILVRNIPFQA+ EV ++FKAFGEL +R+PKKM G HRGFG
Sbjct: 779 SRRRQGSQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELTSLRIPKKMAPGEDAHRGFG 838
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA--EEADNVEDIRKRTNRYF 781
FV+F+TK +AKRA AL STHLYGRRLVLEWA EE D+VE++RKRT F
Sbjct: 839 FVDFVTKADAKRAFDALSASTHLYGRRLVLEWATHEEHDDVEELRKRTAIKF 890
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/452 (36%), Positives = 244/452 (53%), Gaps = 62/452 (13%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+E+L+ F KG +TD+QLKYT +GKFR+F FIGY E++AQAA+ +F+NT + +SR+
Sbjct: 13 ITEEKLRNIFGTKGVITDLQLKYTVDGKFRQFGFIGYSSEEEAQAAIKHFHNTCIQTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGK--------- 139
VE C+ LG KP+SWSKYA DS + ++++ + K +
Sbjct: 73 HVESCAALGSEEKPQSWSKYAKDSKKNLDIAKAEKEKEIAADKLKAKEKKTKEKKRNKVD 132
Query: 140 ----KSKNDPTFSDFLQLHGKDVSKLLPLSNKDG-----------------------EEK 172
+ K+DP F +F+Q H K S +N G + K
Sbjct: 133 EILGEHKDDPAFQEFMQAHDKTRSL---WANDAGLAEKRDDDDQDDNEEEEEENKDVDPK 189
Query: 173 EEENEDESN-----------------NQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVS 215
D+S ++A ISD+EY+K + T+ + +V
Sbjct: 190 PSIGRDDSGVDADAGEDEEEEDEQPVEKLAEKPISDLEYMKSLMATPSTSKTSTAVTTKK 249
Query: 216 KAPVHKR-QYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT--TFLGMAYIGFKDEKNCN 272
P + TI + N+P K++++ +FKPL SVR G Y+GFK EK+
Sbjct: 250 AKPDKSNLELFTIKIHNVPYNTKRQEVLKFFKPLKPYSVRLPGKVHGFCYVGFKTEKDMA 309
Query: 273 KALNKNKSFWKGKQLNIYKYSKDN---SAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
KA+ KNKSF KGKQ+ +++ N A G + + K WK Q+DS+Q
Sbjct: 310 KAMLKNKSFIKGKQVFFSDFTEKNKVTKANKEGRTITTTKSDGDTGKMGKWKQQQDSLQT 369
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
++I+ESGRIF RNL+YT+TE DL KLFE++GP+ E+ LP+DK T K KGF VT++MPE
Sbjct: 370 EDNISESGRIFFRNLAYTITETDLQKLFEQFGPVVEINLPVDKITRKIKGFGTVTYMMPE 429
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGN 421
HA +A+ LDG+ F GR+LHL+PGK + +G+
Sbjct: 430 HALKAFNSLDGSDFHGRLLHLLPGKELDKDGD 461
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 138/326 (42%), Gaps = 42/326 (12%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKALNK 277
KR IV KNLPAG + +L F P+ + G+ A I + D +A K
Sbjct: 561 QKRSKTVIVAKNLPAGTEVSELSPVFSRYGPIGRIVLPPSGVTALIEYCDASEARQAF-K 619
Query: 278 NKSFWKGKQLNIY-KYSKDNSAKYS--GAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
++ K K ++ +++ D + S G A + + + K + + AED
Sbjct: 620 KLAYSKFKDAPLFLEWAPDETFTVSLNGEAIIPKSEPKLEPEPEPAKGKGKTEPVAEDAD 679
Query: 335 E----SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKETDKTKGFALVTF 385
+ IF+RNL++ ++ + + F G + V + P + + G+ + F
Sbjct: 680 DEPEPETTIFLRNLNFKTVQETVWEHFRHLGTIHTVEIARRADPQNPRHSTSLGYGFIQF 739
Query: 386 LMPEHATQAYQHLDGTVFLGRMLHLIPG----KPKENEGNVDGKVHCCISERKLDAFNQV 441
A A +++ T G + L K +E E S R+ +Q
Sbjct: 740 KKHSVAENALKNMQMTTIDGNSVELKRSDRVLKTQEQE-----------SSRRRQG-SQK 787
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP--------PYGITGLVEFLQK 493
+ +K ILV+N+P++ +++ +F+ FG+L + +P + G V+F+ K
Sbjct: 788 KQTGTK--ILVRNIPFQAQYREVRDIFKAFGELTSLRIPKKMAPGEDAHRGFGFVDFVTK 845
Query: 494 NQAKAAFNSL-AYTKFKEVPLYLEWA 518
AK AF++L A T L LEWA
Sbjct: 846 ADAKRAFDALSASTHLYGRRLVLEWA 871
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 119/321 (37%), Gaps = 69/321 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
I +NL Y TDL+ LFE FG + + +P IT G V ++ A AFNSL
Sbjct: 379 IFFRNLAYTITETDLQKLFEQFGPVVEINLPVDKITRKIKGFGTVTYMMPEHALKAFNSL 438
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
+ F L+L GKE +K+ + KE+ E D
Sbjct: 439 DGSDFHGRLLHL--------------LPGKELDKDGD---------KEDMDENDASLSFK 475
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
+ + + ++P TL+ L N+ D + + FK S
Sbjct: 476 QKKALKLKKSAQKPIGWNTLF---LGANAVADILAKQFK----------------TSKEH 516
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
L G R +L + V++ LE E + K+
Sbjct: 517 ILDTSQGGSSAAVRLALGETQIVMEMKQF-------------LEQEGVRLSAFDGVNQKR 563
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ + I+ +N+P + SE+ +F +G + + LP V + +E+ +EA++
Sbjct: 564 SKTVIVAKNLPAGTEVSELSPVFSRYGPIGRIVLPPSGVTA-------LIEYCDASEARQ 616
Query: 744 AMKALCQSTHLYGRRLVLEWA 764
A K L S L LEWA
Sbjct: 617 AFKKLAYS-KFKDAPLFLEWA 636
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 40/212 (18%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T+ I N+ +N+ + + FK P + + PG+ G+ +V F T + +
Sbjct: 261 TIKIHNVPYNTKRQEVLKFFKPLKPYSV---------RLPGKV--HGFCYVGFKTEKDMA 309
Query: 642 QALKVLQNSS-LDEHQIEL-------KRSNRNLESEATTVKRKSSNVAK----------- 682
+A+ L+N S + Q+ K + N E T + + K
Sbjct: 310 KAM--LKNKSFIKGKQVFFSDFTEKNKVTKANKEGRTITTTKSDGDTGKMGKWKQQQDSL 367
Query: 683 QT------GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
QT +I RN+ + ++++++LF+ FG + + LP + + +GFG V ++
Sbjct: 368 QTEDNISESGRIFFRNLAYTITETDLQKLFEQFGPVVEINLPVDKITRKI-KGFGTVTYM 426
Query: 737 TKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
A +A +L + +GR L L +E D
Sbjct: 427 MPEHALKAFNSL-DGSDFHGRLLHLLPGKELD 457
>gi|440906208|gb|ELR56498.1| Putative RNA-binding protein 19 [Bos grunniens mutus]
Length = 947
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 168/357 (47%), Positives = 227/357 (63%), Gaps = 29/357 (8%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 577 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGITAIVEFLEPL 636
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFA----------EAKEKSKGKEKEKNEEEGEE 544
+A+ AF LAY+KF VPLYLEWAP GVF+ +A + G ++ + E +GE
Sbjct: 637 EARKAFRHLAYSKFHHVPLYLEWAPMGVFSSPIPQKEEPQDAPAEPAGTDRMEPETDGET 696
Query: 545 GEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC 604
E E+ EE+ ++ +P TL+IKNLNF++TE++++ F K
Sbjct: 697 PEGEQPTEEEEEEEEESLP----------------GCTLFIKNLNFDTTEETLKGVFSKV 740
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 741 GAVKSCSISKKKN--KAGALLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 798
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK+ G+
Sbjct: 799 ATKP-ALTSARKKQAPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGT 857
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 858 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVSLPALRRKTAEHF 914
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 113/195 (57%), Gaps = 18/195 (9%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKN 278
HT+ ++ P V +K++ + PL A++R G ++ F E+ KAL N
Sbjct: 297 HTVKLRGAPFNVTEKNVMEFLAPLKPAAIRVVRNAHGNKTGYVFVDFSSEEEVRKALKCN 356
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESG 337
+ + G+ + +++ +AK A ++N AK W+ + ED+A+SG
Sbjct: 357 REYMGGRYIEVFRERNVPAAK----------APLKN-GAKPWQGWTLGEHEEEEDLADSG 405
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+FVRNL YT +E+DL KLF +YGP++E+ PID T K KGFA VTF+ PEHA +AY
Sbjct: 406 RLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 465
Query: 398 LDGTVFLGRMLHLIP 412
+DG VF GRMLH++P
Sbjct: 466 VDGQVFQGRMLHVLP 480
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 61/85 (71%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL++FN +++ +SRI
Sbjct: 13 MKEERFRQLFTAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSS 113
VE C GD TKP++WSK+A SS
Sbjct: 73 TVEFCKAFGDPTKPRAWSKHAQKSS 97
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 45/202 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I K+ +K + GF V + PE A +
Sbjct: 719 LFIKNLNFDTTEETLKGVFSKVGAVKSC--SISKKKNKAGALLSMGFGFVEYRKPEQAQK 776
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER + AR K+
Sbjct: 777 ALKQLQGHV-------------------VDGHKLEVRISERATKP--ALTSARKKQAPRK 815
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 816 QTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRGFGFVDFLTKQDAK 875
Query: 498 AAFNSLAY-TKFKEVPLYLEWA 518
AFN+L + T L LEWA
Sbjct: 876 RAFNALCHSTHLYGRRLVLEWA 897
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
++EP T+ ++ FN TE ++ P A V K+ GY FV
Sbjct: 290 QKEPTTPHTVKLRGAPFNVTEKNVMEFLAPLKPAAIRVVRNAHGNKT-------GYVFVD 342
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT--------- 684
F + E + +ALK + IE+ R RN+ + +K + T
Sbjct: 343 FSSEEEVRKALKC-NREYMGGRYIEVFR-ERNVPAAKAPLKNGAKPWQGWTLGEHEEEED 400
Query: 685 ---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
++ VRN+P+ + + ++E+LF +G + + P + + +GF FV F+ A
Sbjct: 401 LADSGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSL-TKKPKGFAFVTFMFPEHA 459
Query: 742 KRA 744
+A
Sbjct: 460 VKA 462
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQTAL 59
>gi|297693058|ref|XP_002823848.1| PREDICTED: probable RNA-binding protein 19 [Pongo abelii]
Length = 999
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/357 (49%), Positives = 232/357 (64%), Gaps = 13/357 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 613 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGITAIVEFLEPL 672
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSK------GKEKEKNEEEGE---EG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ + K + EK+ E E +G
Sbjct: 673 EARKAFRHLAYSKFHHVPLYLEWAPIGVFSSTAPQKKKLQDAPSEPMEKDPAEPETVPDG 732
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKC 604
+ + EN EE ++EE EE+EE E P TL+IKNLNF++TE+ ++ F K
Sbjct: 733 KTPEDENPTEEGADNSSAKMEEEEEEEEEEEERLPGCTLFIKNLNFDTTEEKLKEVFSKV 792
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 793 GTVKSCSISKKKN--KAGALLSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKLEVRISER 850
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK+ G+
Sbjct: 851 ATKP-AVTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGT 909
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 910 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHF 966
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 151/484 (31%), Positives = 229/484 (47%), Gaps = 118/484 (24%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL +FN +++ +SRI
Sbjct: 51 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKHFNKSFIDTSRI 110
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD KP++WSK+A S ++ PK PE KD K +K K
Sbjct: 111 TVEFCKSFGDPAKPRAWSKHAQKPSQPKQ----PPKDSATPEIKKDEKKKKVAGQLEKLK 166
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEEN---- 176
D F +FL +H K S L + G+E EEE
Sbjct: 167 EDTEFQEFLSVHQRRAQAATWANDGPDAESSKGKSKPASDYLNFDSDSGQESEEEGAGKD 226
Query: 177 -EDESNNQIAHA---DISDMEYLKLKT--------------------------KSKDTAP 206
E+E++ + A ++SDM+YLK K ++ +P
Sbjct: 227 LEEEASLEPKTAVQKELSDMDYLKSKMVKSGSSSSSEEEESEDEAVHCDEGSEAEEEDSP 286
Query: 207 SDPSV--------------------PPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
+ P + PP ++A P ++R+ HT+ ++ P V +
Sbjct: 287 TTPVLQEGNSKGAGQEQGMPAGKKRPPEARAETEKPANQREPTTCHTVKLRGAPFNVTEH 346
Query: 240 DLKAYFKPLPLAS----------VRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNI 289
+ PL A+ G ++ F +E+ +AL N+ + G+ + +
Sbjct: 347 SMGV---PLGTATSVCKACRFYLCHCPLSGYIFVDFSNEEEVKQALKCNREYMGGRYIEV 403
Query: 290 YKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ-EDSVQFAEDIAESGRIFVRNLSYTV 348
++ + N GA + K W+ + + ED+AESGR+FVRNL YT
Sbjct: 404 FR--EKNVPTTKGAPKNTT---------KSWQGRILGENEEEEDLAESGRLFVRNLPYTS 452
Query: 349 TEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRML 408
TE+DL KLF KYGPL+E+ PID T K KGFA +TF+ PEHA +AY +DG VF GRML
Sbjct: 453 TEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRML 512
Query: 409 HLIP 412
H++P
Sbjct: 513 HVLP 516
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 43/209 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE A +
Sbjct: 771 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAGALLSMGFGFVEYRKPEQAQK 828
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI---- 449
A + L G H++ G K+ ISER V AR K++
Sbjct: 829 ALKQLQG--------HIVDGH----------KLEVRISERATKP--AVTSARKKQVPRKQ 868
Query: 450 ----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKA 498
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 869 TTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGTHRGFGFVDFLTKQDAKR 928
Query: 499 AFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 929 AFNALCHSTHLYGRRLVLEWADSEVTLQA 957
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 91/237 (38%), Gaps = 45/237 (18%)
Query: 540 EEGEEGEEEKKENTA--EEDNQQGV-------------PEVEENVEED-EEREPEPDTTL 583
+EG E EEE T +E N +G PE E+ +REP T+
Sbjct: 275 DEGSEAEEEDSPTTPVLQEGNSKGAGQEQGMPAGKKRPPEARAETEKPANQREPTTCHTV 334
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
++ FN TE S+ P+ + T K GY FV F E + QA
Sbjct: 335 KLRGAPFNVTEHSMGV------PLGTATSVCKACRFYLCHCPLSGYIFVDFSNEEEVKQA 388
Query: 644 LKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-------------- 689
LK + IE+ R E T K N K +IL
Sbjct: 389 LKC-NREYMGGRYIEVFR-----EKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGR 442
Query: 690 --VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
VRN+P+ + + ++E+LF +G L + P + + +GF F+ F+ A +A
Sbjct: 443 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFITFMFPEHAVKA 498
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A+
Sbjct: 40 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAL 97
Query: 746 K 746
K
Sbjct: 98 K 98
>gi|194868033|ref|XP_001972201.1| GG15393 [Drosophila erecta]
gi|190653984|gb|EDV51227.1| GG15393 [Drosophila erecta]
Length = 917
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 243/358 (67%), Gaps = 17/358 (4%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+LDAF++ + RS +IL KNLP T ++L +F +G +GR+++PP G+T L+E+
Sbjct: 538 RLDAFDEPAKKRSNTVILAKNLPAATDISELTPIFSRYGPIGRIVLPPSGVTALIEYCDP 597
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK--- 550
+A+ AF LAY+KFK PLYLEWAPE VF++ K + E + E EEK
Sbjct: 598 LEARQAFKKLAYSKFKNAPLYLEWAPEQVFSKTLSGDPVIPKSEPEPKEETKPEEKPIVI 657
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
+ AEED++ ED + EPEP+TTL+++NLNF + ++++ +HF+ G I +V
Sbjct: 658 DAKAEEDSRA----------EDADDEPEPNTTLFLRNLNFKTVQETVEKHFRHLGSIHTV 707
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
+A+++DP++P +F S+GYGF+QF ALK LQ + +D + +ELKRS+R L+++
Sbjct: 708 EIAKRRDPENPREFKSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVELKRSDRVLKTQD 767
Query: 671 T-TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK-MVGSGLHR 728
+R+ ++ KQTG+KILVRNIPFQA+ EV ++FKAFGEL+ +R+PKK G HR
Sbjct: 768 NEGSQRRLASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHR 827
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA--EEADNVEDIRKRTNRYFGTA 784
GFGFV++++K EAKRA AL STHLYGRRLVLEW+ +++ +VE++RKRT FGT+
Sbjct: 828 GFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSANDDSQDVEELRKRTAAKFGTS 885
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 163/442 (36%), Positives = 242/442 (54%), Gaps = 51/442 (11%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+++L+ F +GT+TD+QLKYT +GKFR+F F+G+ E++AQ+A+ +F+NT + +SR+
Sbjct: 13 ITEDKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGFSTEEEAQSAIRHFDNTCIQTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHT-----------KDSKP 137
+VE C+ LG KP+SWSKYA DS Q K+ K +
Sbjct: 73 RVESCAALGSEDKPQSWSKYAKDSKKNQDKLKEKEKEAAAKAKESEKKKKKEKVDKVDQI 132
Query: 138 GKKSKNDPTFSDFLQLH--------------------------------GKDVSKLLPLS 165
+ K+DP F +FL+ H G+D S + +
Sbjct: 133 LSRHKDDPEFQEFLEAHDKSRTLWGNDLGINKNLEDDEEDEEEQEESRAGRDDSGVDADA 192
Query: 166 NKDGEEKEEENEDESNNQIAHADISDMEYLK--LKTKSKDTAPSDPSVPPVSKAPVHKRQ 223
+ +E +E+E ++A ISD+EY+K + T S D P +KA +
Sbjct: 193 GDEDGSDDEADEEEETTKLAEKPISDLEYMKSLMATTSGDATVKKPK----TKADKSNLE 248
Query: 224 YHTIVVKNLPAGVKKKDLKAYFKPLPLASVR--TTFLGMAYIGFKDEKNCNKALNKNKSF 281
TI + N+P K++++ +FKPL SVR + G Y+GFK EK+ K + KNKSF
Sbjct: 249 LFTIKIHNVPYNTKRQEVLKFFKPLKPYSVRLPSKVHGFCYVGFKTEKDMAKGMLKNKSF 308
Query: 282 WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFV 341
KGKQ+ +++ N + + + + WK Q+DS+ +DI+ESGRIF
Sbjct: 309 IKGKQVFFSDFTEKNKVTKASKSGQQLAPAAADAGNAKWKHQQDSLSKEDDISESGRIFF 368
Query: 342 RNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGT 401
RNL+YT E++L KLFE++GP+ EV LP+DK T K KGF VT++MPEHA +A+ LDGT
Sbjct: 369 RNLAYTTNEEELRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNTLDGT 428
Query: 402 VFLGRMLHLIPGKPKENEGNVD 423
F GR+LHL+P K E N D
Sbjct: 429 DFHGRLLHLLPSKDIEKNSNED 450
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 144/343 (41%), Gaps = 66/343 (19%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFK--------PLPLASV------------RTTF 257
P KR I+ KNLPA +L F LP + V R F
Sbjct: 545 PAKKRSNTVILAKNLPAATDISELTPIFSRYGPIGRIVLPPSGVTALIEYCDPLEARQAF 604
Query: 258 LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
+AY F KN L W +Q+ S D S E
Sbjct: 605 KKLAYSKF---KNAPLYLE-----WAPEQVFSKTLSGDPVIPKSEPEPKEETKPEEKPIV 656
Query: 318 KHWKSQEDS-VQFAEDIAE-SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PI 370
K++EDS + A+D E + +F+RNL++ ++ + K F G + V + P
Sbjct: 657 IDAKAEEDSRAEDADDEPEPNTTLFLRNLNFKTVQETVEKHFRHLGSIHTVEIAKRRDPE 716
Query: 371 DKETDKTKGFALVTF---LMPEHATQAYQ--HLDGT-VFLGRMLHLIPGKPKENEGNVDG 424
+ K+ G+ + F + EHA + Q H+DG V L R ++ K ++NEG
Sbjct: 717 NPREFKSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVELKRSDRVL--KTQDNEG---- 770
Query: 425 KVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGI 484
S+R+L + + + ILV+N+P++ +++ +F+ FG+L + +P
Sbjct: 771 ------SQRRLASQKKQTGTK----ILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKAT 820
Query: 485 T--------GLVEFLQKNQAKAAFNSL-AYTKFKEVPLYLEWA 518
T G V+++ K +AK AF++L A T L LEW+
Sbjct: 821 TGEDAHRGFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWS 863
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 120/323 (37%), Gaps = 70/323 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
I +NL Y T +L+ LFE FG + V +P +T G V ++ A AFN+L
Sbjct: 366 IFFRNLAYTTNEEELRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNTL 425
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
T F L+L P SK EK N E+ E D
Sbjct: 426 DGTDFHGRLLHL--LP----------SKDIEKNSN------------EDLDENDASLSFK 461
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E + + ++P TL+ L N+ + + + FK S +
Sbjct: 462 EKKALKLKKNAQKPIGWNTLF---LGANAVAEILAKQFK----------------TSKER 502
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
L G R +L + V IE+KR LE E + K+
Sbjct: 503 ILDTSDGGSSAAVRLALGETQVV----------IEMKRF---LEEEGVRLDAFDEPAKKR 549
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ + IL +N+P SE+ +F +G + + LP V + +E+ EA++
Sbjct: 550 SNTVILAKNLPAATDISELTPIFSRYGPIGRIVLPPSGVTA-------LIEYCDPLEARQ 602
Query: 744 AMKALCQSTHLYGRRLVLEWAEE 766
A K L S L LEWA E
Sbjct: 603 AFKKLAYS-KFKNAPLYLEWAPE 624
>gi|291407017|ref|XP_002719829.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Oryctolagus cuniculus]
Length = 1025
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/357 (48%), Positives = 225/357 (63%), Gaps = 13/357 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +IL KNLP TL +L+ F FG LGRVL+P G+T +VEFL+
Sbjct: 548 LDSFSQAAGERSKTVILAKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVTAIVEFLEPL 607
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN--------EEEGEEGE 546
+A+ AF LAY+KF VPLYLEWAP GVF+ A + KG+ E E
Sbjct: 608 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSGAAPQKKGRRDAPAEPAAEDAVEPEAVPDS 667
Query: 547 EEKKENTAEEDNQQG--VPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC 604
E + E G EE EE+EE E P T++IKNLNF++TE++++ F K
Sbjct: 668 ESPEGEQPSEGGADGPSAEMEEEEEEEEEEEESLPGCTVFIKNLNFSTTEETLKEVFSKV 727
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S +++RKK G+ LSMG+GFV++ E ++ALK LQ +D H++E++ S R
Sbjct: 728 GMVKSCSISRKKS--KTGELLSMGFGFVEYRKPEQADRALKQLQGHVVDGHKLEVRISER 785
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+
Sbjct: 786 ATRP-ALTSARKKQVPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGT 844
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 845 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAEHF 901
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 150/460 (32%), Positives = 217/460 (47%), Gaps = 97/460 (21%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + FE GT+TD LK+T +GKFR+F FIG+ ED+A+ AL++FN +++ +SR+
Sbjct: 13 MKEERFRQLFEAFGTLTDCSLKFTKDGKFRKFGFIGFKSEDEARTALNHFNKSFIDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGK------KSK 142
VE C + GD TKP++WSK+ S + P Q+ P K K K K K
Sbjct: 73 AVEFCKSFGDPTKPRAWSKHTQKPS-----QDKLPSQEPAPAEAKRDKKTKAPSGLGKLK 127
Query: 143 NDPTFSDFLQLHGK---------DVSKLLPLS----------NKDGEEKEEENEDESNNQ 183
D F +FL +H + D PL N D + +E ED +
Sbjct: 128 EDAEFQEFLSVHQRRAQAATWANDALGAEPLRAQRKAADDYLNFDSDSGQESEEDGAGAD 187
Query: 184 I-----------AHADISDMEYLKLKTKSKDTAP-------------------SDPSV-- 211
+ A ++SDM+YLK K +A S+P
Sbjct: 188 VEEEEGPEPKAAARKELSDMDYLKSKVVRAGSASSSSSEEEESEDEAVNCDGGSEPEEED 247
Query: 212 PPVSKAPV----------------HKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT 255
PP + P H+R KN+ + A KP+ + VR
Sbjct: 248 PPTAATPQGRESGGAGQEPGAQPGHRRAPEARAQKNV------LEFLAPLKPVAIRIVRN 301
Query: 256 TF---LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASM 312
G ++ F E+ KAL N+ + G+ + +++ K A +S
Sbjct: 302 AHGNKTGYVFVDFSSEEEVKKALKCNREYMGGRYIEVFR------EKPVPATKGPQKSST 355
Query: 313 ENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDK 372
+ + E+ ED+A+SGR+FVRNL YT TE+DL KLF KYGPL+E+ PID
Sbjct: 356 RPWQGRTLGENEEE----EDLADSGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDS 411
Query: 373 ETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
T K KGFA VTF+MPEHA +AY +DG VF GRMLH++P
Sbjct: 412 LTKKPKGFAFVTFMMPEHAVKAYAGVDGQVFQGRMLHVLP 451
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 45/202 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-----GFALVTFLMPEHATQ 393
+F++NL+++ TE+ L ++F K G + I ++ KT GF V + PE A +
Sbjct: 706 VFIKNLNFSTTEETLKEVFSKVGMVKSC--SISRKKSKTGELLSMGFGFVEYRKPEQADR 763
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER + AR K++
Sbjct: 764 ALKQLQGHV-------------------VDGHKLEVRISERATRP--ALTSARKKQVPRK 802
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 803 QTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAK 862
Query: 498 AAFNSLAY-TKFKEVPLYLEWA 518
AFN+L + T L LEWA
Sbjct: 863 RAFNALCHSTHLYGRRLVLEWA 884
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF+AFG L L K G R FGF+ F +++EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFEAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEDEARTAL 59
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 21/159 (13%)
Query: 628 GYGFVQFYTRESLNQALK------------VLQNSSLDEHQIELKRSNRNLESEATTVKR 675
GY FV F + E + +ALK V + + + K S R +
Sbjct: 308 GYVFVDFSSEEEVKKALKCNREYMGGRYIEVFREKPVPATKGPQKSSTRPWQGRTLGENE 367
Query: 676 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
+ ++A ++ VRN+P+ + + ++E+LF +G L + P + + +GF FV F
Sbjct: 368 EEEDLADS--GRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFVTF 424
Query: 736 ITKNEAKRAMKAL------CQSTHLYGRRLVLEWAEEAD 768
+ A +A + + H+ + E +EEAD
Sbjct: 425 MMPEHAVKAYAGVDGQVFQGRMLHVLPSTIKKEASEEAD 463
>gi|432094975|gb|ELK26383.1| Putative RNA-binding protein 19 [Myotis davidii]
Length = 966
Score = 309 bits (791), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 177/357 (49%), Positives = 232/357 (64%), Gaps = 13/357 (3%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P G+T +VEFL+
Sbjct: 580 LDSFSQPAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVTAIVEFLEPL 639
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVF---AEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
+A+ AF LAY+KF VPLYLEWAP GVF A E+ + E E++G E E
Sbjct: 640 EARKAFRHLAYSKFHHVPLYLEWAPMGVFFSSAPQSEEPQDTPAEPAEKDGAEPEPVPDS 699
Query: 552 NT--AEEDNQQGVPE----VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
T EE + G + +EE EE+EE E P TL+IKNLNF++TE++++ F K G
Sbjct: 700 ETREGEEPTEGGAADSSLKMEEEEEEEEEEESLPGCTLFIKNLNFDTTEETLKGVFSKMG 759
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL-DEHQIELKRSNR 664
+ S +++RKK+ G LSMG+GFV++ E +ALK L + D+H++E++ S R
Sbjct: 760 AVRSCSISRKKN--KAGALLSMGFGFVEYRKPEQAQKALKQLXXGHVVDDHKLEVRISER 817
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+
Sbjct: 818 ATKP-ALTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGT 876
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 877 GAHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAEHF 933
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 109/195 (55%), Gaps = 18/195 (9%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKN 278
HT+ ++ P V +K++ + PL ++R G ++ F E+ KAL N
Sbjct: 300 HTVKLRGAPFNVTEKNVTEFLAPLKPVAIRIVRNAHGNKTGYVFVDFSSEEEVKKALKCN 359
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESG 337
+ + G+ + +++ AK + +K W+ + + ED+A+SG
Sbjct: 360 REYMGGRYIEVFREKTVPVAKGPPKSS-----------SKPWQGRTLGEDEEEEDLADSG 408
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+FVRNL YT TE+DL K+F KYGPL+E+ PID T K KGFA V+F+ PEHA +AY
Sbjct: 409 RLFVRNLPYTSTEEDLEKIFSKYGPLSELHYPIDSLTKKPKGFAFVSFMFPEHAVKAYAE 468
Query: 398 LDGTVFLGRMLHLIP 412
+DG VF GRMLH++P
Sbjct: 469 VDGQVFQGRMLHVLP 483
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 55/215 (25%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL++F+ ++V +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQRALNHFHKSFVDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKS------- 141
VE C + GD TKP++WSK+A QK P Q +P KDS P +
Sbjct: 73 TVEFCRSFGDPTKPRAWSKHA------QK-----PSQAKQPPKDKDSVPPETKKDKKKKK 121
Query: 142 --------KNDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEE 171
K + F +FL +H K S L + G+E
Sbjct: 122 AASELEELKENTEFREFLSVHQRRTQAATWANDALDTEPSQGKSKQASDYLNFDSDSGQE 181
Query: 172 KEEENEDESNNQ-------IAHADISDMEYLKLKT 199
EE ++S + ++SDM+YLK K
Sbjct: 182 SEEGAGEDSEEEGGLEPKAAVRKELSDMDYLKSKV 216
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 42/209 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I ++ +K + GF V + PE A +
Sbjct: 737 LFIKNLNFDTTEETLKGVFSKMGAVRSC--SISRKKNKAGALLSMGFGFVEYRKPEQAQK 794
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI---- 449
A + L H++ D K+ ISER + AR K++
Sbjct: 795 ALKQLXXG-------HVVD----------DHKLEVRISERATKP--ALTSARKKQVPRKQ 835
Query: 450 ----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKA 498
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 836 TTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFLTKQDAKR 895
Query: 499 AFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 896 AFNALCHSTHLYGRRLVLEWADSEVTLQA 924
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 38/235 (16%)
Query: 538 NEEEGEEGEEEK---------KENTA---EEDNQQGVPEVEENVEEDE----EREPEPDT 581
N +EG E EEE +E T E+ G + +E + E + EP
Sbjct: 241 NCDEGSEAEEEDPCAAPARQGQERTGPGPEQGTLSGTKKPQEASAQKEKPAVQWEPSTPH 300
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T+ ++ FN TE ++ P+A V K+ GY FV F + E +
Sbjct: 301 TVKLRGAPFNVTEKNVTEFLAPLKPVAIRIVRNAHGNKT-------GYVFVDFSSEEEVK 353
Query: 642 QALK------------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
+ALK V + ++ + K S++ + + ++A ++
Sbjct: 354 KALKCNREYMGGRYIEVFREKTVPVAKGPPKSSSKPWQGRTLGEDEEEEDLADS--GRLF 411
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
VRN+P+ + + ++E++F +G L + P + + +GF FV F+ A +A
Sbjct: 412 VRNLPYTSTEEDLEKIFSKYGPLSELHYPIDSL-TKKPKGFAFVSFMFPEHAVKA 465
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+RA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQRAL 59
>gi|395833986|ref|XP_003789998.1| PREDICTED: probable RNA-binding protein 19 [Otolemur garnettii]
Length = 959
Score = 309 bits (791), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 228/359 (63%), Gaps = 17/359 (4%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 573 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGHFGSLGRVLLPEGGITAIVEFLEPL 632
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF +LAY+KF VPLYLEWAP VF+ A + K E + E E+ + E K
Sbjct: 633 EARKAFRNLAYSKFHHVPLYLEWAPVCVFSSAAPQKKESE-DATSEPAEKDKIEPKPVPD 691
Query: 555 EEDNQQGVPEVEENVEEDEEREPE------------PDTTLYIKNLNFNSTEDSIRRHFK 602
E + G P E ++ + E P TL+IKNLNF++TE++++ F
Sbjct: 692 SETPESGKP-TEGGLDNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEETLKNVFS 750
Query: 603 KCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS 662
K G + S ++++KK+ G LSMG+GFV++ E +ALK Q +D H++E++ S
Sbjct: 751 KVGMVKSCSISKKKN--KAGALLSMGFGFVEYRKPEQAQKALKQPQGLVVDNHKLEVRIS 808
Query: 663 NRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV 722
R + T+ ++K + KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM
Sbjct: 809 ERATKPALTSARKKQVS-KKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMT 867
Query: 723 GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 868 GTGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQTLRRKTAEHF 926
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 16/194 (8%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKN 278
HT+ ++ P V +K++ + PL ++R G ++ F E+ KAL N
Sbjct: 294 HTVKLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFNSEEEVKKALKCN 353
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
+ + G+ + +++ K S A + + E+ ED+A+SGR
Sbjct: 354 REYMGGRYIEVFR------EKSSPMAKGPQKRGTTPWQGRTLGDNEEE----EDLADSGR 403
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVRNL YT TE+DL KLF K+GPL+E+ PID K KGFA VTF+ PEHA +AY +
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKFGPLSEIHYPIDSLIKKPKGFAFVTFMFPEHAVKAYTEV 463
Query: 399 DGTVFLGRMLHLIP 412
DG VF GRMLH++P
Sbjct: 464 DGQVFQGRMLHVLP 477
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 80/132 (60%), Gaps = 10/132 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T EGKFR+F FIG+ E++AQ AL++FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKEGKFRKFGFIGFKSEEEAQTALNHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD TKP++WSK+A S Q+L PK PE K K +K K
Sbjct: 73 TVEFCKSFGDPTKPRAWSKHAQKPSQSQQL----PKDSFVPESKKGDKKKKVAGDLEKLK 128
Query: 143 NDPTFSDFLQLH 154
D F +FL +H
Sbjct: 129 EDSEFQEFLSVH 140
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 45/202 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I K+ +K + GF V + PE A +
Sbjct: 731 LFIKNLNFDTTEETLKNVFSKVGMVKSC--SISKKKNKAGALLSMGFGFVEYRKPEQAQK 788
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + G V VD K+ ISER + AR K++
Sbjct: 789 ALKQPQGLV-------------------VDNHKLEVRISERATKP--ALTSARKKQVSKK 827
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 828 QTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAK 887
Query: 498 AAFNSLAY-TKFKEVPLYLEWA 518
AFN+L + T L LEWA
Sbjct: 888 RAFNALCHSTHLYGRRLVLEWA 909
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 24/184 (13%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
++EP T+ ++ FN TE ++ P+A V K+ GY FV
Sbjct: 287 QKEPTTPHTVKLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYIFVD 339
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTG-------- 685
F + E + +ALK + IE+ R + ++ + + + G
Sbjct: 340 FNSEEEVKKALKC-NREYMGGRYIEVFREKSSPMAKGPQKRGTTPWQGRTLGDNEEEEDL 398
Query: 686 ---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH--RGFGFVEFITKNE 740
++ VRN+P+ + + ++E+LF FG L + P + S + +GF FV F+
Sbjct: 399 ADSGRLFVRNLPYTSTEEDLEKLFSKFGPLSEIHYP---IDSLIKKPKGFAFVTFMFPEH 455
Query: 741 AKRA 744
A +A
Sbjct: 456 AVKA 459
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKEGKFRKFGFIGFKSEEEAQTAL 59
>gi|195490760|ref|XP_002093276.1| GE20857 [Drosophila yakuba]
gi|194179377|gb|EDW92988.1| GE20857 [Drosophila yakuba]
Length = 919
Score = 308 bits (790), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 240/358 (67%), Gaps = 17/358 (4%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+LDAF++ + RS +IL KNLP T ++L +F FG +GR+++PP G+T L+E+
Sbjct: 540 RLDAFDEPAKKRSNSVILAKNLPAATEISELTPIFSRFGPIGRIVLPPSGVTALIEYCDP 599
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK--- 550
+A+ AF LAY+KFK PLYLEWAPE VF++ K + + + E EEK
Sbjct: 600 LEARQAFKKLAYSKFKNAPLYLEWAPEQVFSKTLSGDPVIPKSEPKPKEEPKPEEKPIVI 659
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
+ AEED + ED + EPEP+TTL+++NLNF + ++++ +HF+ G I +V
Sbjct: 660 DEKAEEDTRA----------EDADDEPEPNTTLFLRNLNFKTVQETVEKHFRHLGSIHTV 709
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
+A++++P++P +F S+GYGF+QF ALK LQ + +D + +ELKRS+R L+++
Sbjct: 710 EIAKRRNPENPREFNSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVELKRSDRVLKTQD 769
Query: 671 T-TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK-MVGSGLHR 728
+R+ ++ KQTG+KILVRNIPFQA+ EV ++FKAFGEL+ +R+PKK G HR
Sbjct: 770 NEGAQRRLASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHR 829
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN--VEDIRKRTNRYFGTA 784
GFGFV++++K EAKRA AL STHLYGRRLVLEW+ DN VE++RKRT FG++
Sbjct: 830 GFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSANDDNQDVEELRKRTAAKFGSS 887
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 164/445 (36%), Positives = 241/445 (54%), Gaps = 60/445 (13%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+++L+ F +GT+TD+QLKYT +GKFR+F F+GY E++AQ+A+ +F+NT + + R+
Sbjct: 13 ITEDKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGYSTEEEAQSAIRHFDNTCIQTIRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDS-----------SAYQKLHNIAPKQDLKPEHTKDSKP 137
+VE C+ LG KP+SWSKYA DS + K+ K + K +
Sbjct: 73 RVESCAALGSEDKPQSWSKYAKDSKKNLDKLKEKEKEAAAKAKESEKKKKKEKVDKVDQI 132
Query: 138 GKKSKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEK--------------EEENEDES--- 180
+ K+DP F +FL+ H D S+ L N G K D+S
Sbjct: 133 LSRHKDDPEFQEFLEAH--DKSRTL-WGNDLGINKNQDDDEEDEEEQEESRAGRDDSGVD 189
Query: 181 --------------------NNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVH 220
++A ISD+EY+K + T+ + +KA
Sbjct: 190 ADAGDEDEDGSDDEADEEEETAKLAEKPISDLEYMK--SLMATTSGDATAKKTKTKADKS 247
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVR--TTFLGMAYIGFKDEKNCNKALNKN 278
+ TI + N+P K++++ +FKPL SVR + G Y+GFK EK+ K + KN
Sbjct: 248 NLELFTIKIHNVPYNTKRQEVLKFFKPLKPYSVRLPSKVHGFCYVGFKTEKDMAKGMLKN 307
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
KSF KGKQ+ +++ N + + + + WK Q+DS+ +DI+ESGR
Sbjct: 308 KSFIKGKQVFFSDFTEKNKVTKANKSGQPLAPAAADAGNAKWKHQQDSLSKEDDISESGR 367
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IF RNL+YT TE+DL KLFE++GP+ EV LP+DK T K KGF VT++MPEHA +A+ L
Sbjct: 368 IFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNAL 427
Query: 399 DGTVFLGRMLHLIPGK-----PKEN 418
DGT F GR+LHL+P K PKE+
Sbjct: 428 DGTDFHGRLLHLLPSKDIEKNPKED 452
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 146/335 (43%), Gaps = 50/335 (14%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKAL 275
P KR I+ KNLPA + +L F P+ + G+ A I + D +A
Sbjct: 547 PAKKRSNSVILAKNLPAATEISELTPIFSRFGPIGRIVLPPSGVTALIEYCDPLEARQAF 606
Query: 276 N-------KNKSF---WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQED 325
KN W +Q+ S D S E K++ED
Sbjct: 607 KKLAYSKFKNAPLYLEWAPEQVFSKTLSGDPVIPKSEPKPKEEPKPEEKPIVIDEKAEED 666
Query: 326 S-VQFAEDIAE-SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKETDKTK 378
+ + A+D E + +F+RNL++ ++ + K F G + V + P + +
Sbjct: 667 TRAEDADDEPEPNTTLFLRNLNFKTVQETVEKHFRHLGSIHTVEIAKRRNPENPREFNSL 726
Query: 379 GFALVTF---LMPEHATQAYQ--HLDGT-VFLGRMLHLIPGKPKENEGNVDGKVHCCISE 432
G+ + F + EHA + Q H+DG V L R ++ K ++NEG ++
Sbjct: 727 GYGFIQFKKSSVAEHALKNLQLTHIDGNPVELKRSDRVL--KTQDNEG----------AQ 774
Query: 433 RKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------- 485
R+L + Q + +K ILV+N+P++ +++ +F+ FG+L + +P T
Sbjct: 775 RRLAS--QKKQTGTK--ILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRG 830
Query: 486 -GLVEFLQKNQAKAAFNSL-AYTKFKEVPLYLEWA 518
G V+++ K +AK AF++L A T L LEW+
Sbjct: 831 FGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWS 865
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 121/323 (37%), Gaps = 70/323 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
I +NL Y T DL+ LFE FG + V +P +T G V ++ A AFN+L
Sbjct: 368 IFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNAL 427
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
T F L+L K+ EKN KE+ E D
Sbjct: 428 DGTDFHGRLLHL--------------LPSKDIEKN----------PKEDLDENDASLSFK 463
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E + + ++P TL+ L N+ + + + FK S +
Sbjct: 464 EKKALKLKKNAQKPIGWNTLF---LGANAVAEILAKQFKT----------------SKER 504
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
L G R +L + V IE+KR LE E + K+
Sbjct: 505 ILDTSDGGSSAAVRLALGETQVV----------IEMKRF---LEEEGVRLDAFDEPAKKR 551
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ S IL +N+P + SE+ +F FG + + LP V + +E+ EA++
Sbjct: 552 SNSVILAKNLPAATEISELTPIFSRFGPIGRIVLPPSGVTA-------LIEYCDPLEARQ 604
Query: 744 AMKALCQSTHLYGRRLVLEWAEE 766
A K L S L LEWA E
Sbjct: 605 AFKKLAYS-KFKNAPLYLEWAPE 626
>gi|384483751|gb|EIE75931.1| hypothetical protein RO3G_00635 [Rhizopus delemar RA 99-880]
Length = 831
Score = 308 bits (790), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 192/517 (37%), Positives = 297/517 (57%), Gaps = 79/517 (15%)
Query: 304 ADDNNNASMENIKAKHWKSQEDSVQF--AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYG 361
++D A ++ KA+ ++E++ Q + IAE+GR+F+RNL+Y TEDDL ++FEKYG
Sbjct: 323 SNDVEVAEADDTKAEAMDTEEETKQKDPKDLIAETGRLFIRNLTYACTEDDLKEVFEKYG 382
Query: 362 PLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGK------- 414
L+EV +PI K+T K+KG+A +++L+PEHA +AY+ LD F GR+LH+IPG+
Sbjct: 383 TLSEVHMPIAKDTKKSKGYAYISYLLPEHALKAYEALDMKTFQGRLLHIIPGEEKPPTKE 442
Query: 415 -----PKENEGNVDGKVHCCISER---------KLDAFNQVV------------------ 442
P + + + I++R DA N V
Sbjct: 443 EELMGPNGTKLSSADAIAESIADRLGVSKSEVLNADANNMAVRLALAETQIVNETKEFFE 502
Query: 443 -----------EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFL 491
+ RS+ IILVKN+PY T D++ LF +G+LGRVL+PP +VEFL
Sbjct: 503 KHGIVLDTFGKKERSETIILVKNIPYGTTEEDMRELFGKYGELGRVLMPPAKTIAVVEFL 562
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
+ ++A+ AF SLAY ++K+ +YLE AP G+F + K N+++ ++ EEEKK
Sbjct: 563 EPSEARNAFKSLAYRRYKDSLIYLEKAPSGLF-----RDKFVRGGANDKKEQKVEEEKKP 617
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
+A E + EE + T++++KN++F++T +S+R FK S
Sbjct: 618 KSATE------------LLAAEEESSDDITSIFVKNISFSTTVESLRNAFKGIPGYRSSR 665
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
+ K DPK+ G+ LSMGYGFV+F ++ + +A+ +Q LDEH ++LK S+ +A
Sbjct: 666 INVKPDPKNTGKTLSMGYGFVEFDSKSNAEKAINAMQGYLLDEHALQLKLSHH----KAG 721
Query: 672 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
T +KS +K++VRN+PF+A ++ ELF ++G+LK +R+PKK G HRGF
Sbjct: 722 TNSKKSKT---PETTKLVVRNVPFEATDKDLRELFGSYGQLKSLRMPKKFTGG--HRGFA 776
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
F++F+TK EAK + + HLYGR LVLEWA+E D
Sbjct: 777 FLDFLTKQEAKNVYDNMG-NIHLYGRHLVLEWAQEGD 812
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+++E+ + F +KG VTD +L T G RRF FIGY E A AA+ YFNNT++ + RI
Sbjct: 117 LSEEKFREHFAKKGEVTDAKLVKTKHGSSRRFGFIGYKTEAVADAAIQYFNNTFINTCRI 176
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQK 117
VEK G P++WSKY P SSA++K
Sbjct: 177 SVEKAIAYGSEQLPRAWSKYTPGSSAHEK 205
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 30/215 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEK---YGPLAEVILPIDKETDKT--KGFALVTFLMPEHATQ 393
IFV+N+S++ T + L F+ Y + P K T KT G+ V F +A +
Sbjct: 637 IFVKNISFSTTVESLRNAFKGIPGYRSSRINVKPDPKNTGKTLSMGYGFVEFDSKSNAEK 696
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + G + L L +S K ++ + ++V+
Sbjct: 697 AINAMQGYLLDEHALQL------------------KLSHHKAGTNSKKSKTPETTKLVVR 738
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG-----LVEFLQKNQAKAAFNSLAYTKF 508
N+P+ DL+ LF +G L + +P G ++FL K +AK ++++
Sbjct: 739 NVPFEATDKDLRELFGSYGQLKSLRMPKKFTGGHRGFAFLDFLTKQEAKNVYDNMGNIHL 798
Query: 509 KEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGE 543
L LEWA EG +A E S +++ EE E
Sbjct: 799 YGRHLVLEWAQEG--DKASESSLDGSRKRRREEDE 831
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 43/214 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFK-------------PLPLASVRTTFLGMAYIGFKDEKNCN 272
+I VKN+ + L+ FK P P + +T +G ++ F + N
Sbjct: 636 SIFVKNISFSTTVESLRNAFKGIPGYRSSRINVKPDPKNTGKTLSMGYGFVEFDSKSNAE 695
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
KA+N + Y D A +K H K+ +S +
Sbjct: 696 KAINA-----------MQGYLLDEHAL--------------QLKLSHHKAGTNSKK--SK 728
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
E+ ++ VRN+ + T+ DL +LF YG L + +P K T +GFA + FL + A
Sbjct: 729 TPETTKLVVRNVPFEATDKDLRELFGSYGQLKSLRMP-KKFTGGHRGFAFLDFLTKQEAK 787
Query: 393 QAYQHLDGTVFLGRMLHLIPGK--PKENEGNVDG 424
Y ++ GR L L + K +E ++DG
Sbjct: 788 NVYDNMGNIHLYGRHLVLEWAQEGDKASESSLDG 821
>gi|351694750|gb|EHA97668.1| Putative RNA-binding protein 19 [Heterocephalus glaber]
Length = 955
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/360 (46%), Positives = 221/360 (61%), Gaps = 18/360 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +IL KNLP TL +L+ F FG LGRVL+P G+T +VEFL+
Sbjct: 568 LDSFSQAAAERSKTVILAKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVTAIVEFLEPL 627
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY+KF VPLYLEWAP +F+ + K + E G++ E E A
Sbjct: 628 EARKAFRHLAYSKFHHVPLYLEWAPISIFSSTAPQEKAPQNPPAEPAGKDRAE--PEAVA 685
Query: 555 EEDNQQGVPEVEENVEEDEEREPE-------------PDTTLYIKNLNFNSTEDSIRRHF 601
+ + EE + E P TL+IKNLNF++TE++++ F
Sbjct: 686 DSETPGTGKPAEERAAASTTKMEEEEEQEEEEENESLPGCTLFIKNLNFDTTEETLKEVF 745
Query: 602 KKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKR 661
K G + S +V++KK+ + G LSMG+GFV++ E +AL+ LQ +D H++EL+
Sbjct: 746 SKAGAVRSCSVSKKKNKE--GALLSMGFGFVEYRKPEHAQKALRQLQGHVVDGHKLELRI 803
Query: 662 SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM 721
S R A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM
Sbjct: 804 SERATRP-ALTSSRKKQVPRKQTTSKILVRNIPFQASLREIRELFSTFGELKTVRLPKKM 862
Query: 722 VGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 863 TGTGAHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQTLRRKTAEHF 922
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/471 (30%), Positives = 222/471 (47%), Gaps = 98/471 (20%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E +AQ AL +FN ++ ++RI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEVEAQRALSHFNKCFIDTARI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYA--PDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPT 146
VE C + GD TKP++WSK+A P + + P+ + + + S+ +K K D
Sbjct: 73 TVEFCKSFGDPTKPRAWSKHAQKPSEPKKSQKDSACPETKKEKKKREPSEL-EKLKEDTE 131
Query: 147 FSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEEN-------- 176
F +FL +H GK S L + G+E EEE
Sbjct: 132 FQEFLSVHQKRTQVATWANDALDTELPRGKGKSASDYLNFDSDSGQESEEEEEEEEAAGE 191
Query: 177 -----EDESNNQIAHADISDMEYLKLK--------------------------------- 198
+D ++SDM+YLK K
Sbjct: 192 ELEGEQDLKPKAAVQKELSDMDYLKSKMVQAGSVSSLEEESEDEAMNCDEESEAKEEEET 251
Query: 199 ----TKSKDTAPSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKKDLKAYFKP 247
AP + P S+A P ++++ HT+ ++ P V +K++ + P
Sbjct: 252 ERRAASPGHRAPPEHGRPQDSRAESEKPTNQKEPTTCHTVKLRGAPFNVTEKNVTEFLAP 311
Query: 248 LPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYS 301
L ++R G ++ F E+ KAL N+ + G+ + +++ + AK
Sbjct: 312 LKPVAIRIVRNAHGNKTGYIFVDFSSEEEVKKALKCNREYMGGRYIEVFREKQVPMAK-- 369
Query: 302 GAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYG 361
+ +S + + + E+ ED+A+SGR+FVRNL YT TE+DL KLF YG
Sbjct: 370 ----EPLKSSTKAWQGRMLGENEEE----EDLADSGRLFVRNLPYTSTEEDLEKLFSTYG 421
Query: 362 PLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
PL+E+ PID T K KGFA VTFL PEHA +AY +DG VF GRMLH++P
Sbjct: 422 PLSELHFPIDSLTKKPKGFAFVTFLFPEHAVKAYSAVDGQVFQGRMLHVLP 472
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 30/240 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK---TKGFALVTFLMPEHATQAY 395
+F++NL++ TE+ L ++F K G + + K + + GF V + PEHA +A
Sbjct: 727 LFIKNLNFDTTEETLKEVFSKAGAVRSCSVSKKKNKEGALLSMGFGFVEYRKPEHAQKAL 786
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ L G H++ G E + S RK QV ++ ILV+N+
Sbjct: 787 RQLQG--------HVVDGHKLELRISERATRPALTSSRK----KQVPRKQTTSKILVRNI 834
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAY-TK 507
P++ +++ LF FG+L V +P + G V+FL K AK AFN+L + T
Sbjct: 835 PFQASLREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFLTKQDAKRAFNALCHSTH 894
Query: 508 FKEVPLYLEWAPEGVFAEAKEKSKG-------KEKEKNEEEGEEGEEEKKENTAEEDNQQ 560
L LEWA V + + K+K+ +G G+ E E+ EE Q
Sbjct: 895 LYGRRLVLEWADSEVTLQTLRRKTAEHFHEPPKKKQSAVLDGILGQLEDSESDGEEQTLQ 954
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 22/187 (11%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
++EP T+ ++ FN TE ++ P+A V K+ GY FV
Sbjct: 282 QKEPTTCHTVKLRGAPFNVTEKNVTEFLAPLKPVAIRIVRNAHGNKT-------GYIFVD 334
Query: 634 FYTRESLNQALK------------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
F + E + +ALK V + + + LK S + + + ++A
Sbjct: 335 FSSEEEVKKALKCNREYMGGRYIEVFREKQVPMAKEPLKSSTKAWQGRMLGENEEEEDLA 394
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
++ VRN+P+ + + ++E+LF +G L + P + + +GF FV F+ A
Sbjct: 395 DS--GRLFVRNLPYTSTEEDLEKLFSTYGPLSELHFPIDSL-TKKPKGFAFVTFLFPEHA 451
Query: 742 KRAMKAL 748
+A A+
Sbjct: 452 VKAYSAV 458
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+RA+
Sbjct: 2 SRLIVKNLPSGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEVEAQRAL 59
>gi|213511062|ref|NP_001133976.1| probable RNA-binding protein 19 [Salmo salar]
gi|209156026|gb|ACI34245.1| Probable RNA-binding protein 19 [Salmo salar]
Length = 912
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/357 (47%), Positives = 227/357 (63%), Gaps = 32/357 (8%)
Query: 427 HCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG 486
H C LD+F+Q RS + LVKNLP +L+ LF P G LGRVL+PP G+T
Sbjct: 558 HVC-----LDSFSQAAGPRSMSVFLVKNLPAGVTVENLEELFSPHGTLGRVLLPPAGLTA 612
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGE 546
++E+L+ +AK AF LAY+KF+ VPLYLEWAP GVF+ A +
Sbjct: 613 IIEYLEPTEAKQAFTRLAYSKFQHVPLYLEWAPTGVFSAAMPSKTLTP-----------D 661
Query: 547 EEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGP 606
E T+ ++ ++ E EE + +TL+IKNLNF +TE+++R F KCG
Sbjct: 662 PEPTTKTSAQEEEEEEEEEEEAL----------GSTLFIKNLNFTTTEETLRETFSKCGT 711
Query: 607 IASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNL 666
+ + T+++KKD GQ LSMGYGFV + T+++ +A++ LQ+ S+D+HQ+ELK S R
Sbjct: 712 LKTCTISKKKD--KTGQLLSMGYGFVTYRTQKAAEKAIRQLQHCSVDDHQLELKVSERAT 769
Query: 667 ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 726
+S V RK KQT SKILVRN+PFQA E+ ELF FGELK VRLPKK G+G
Sbjct: 770 KS--AIVSRKKQAERKQTSSKILVRNVPFQATVREIRELFCTFGELKTVRLPKKASGTGT 827
Query: 727 --HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
HRGFGFV+F+TK +AK+A ALC STHLYGRRLVLEWA+ D VE +R++T +F
Sbjct: 828 GPHRGFGFVDFLTKQDAKKAFSALCHSTHLYGRRLVLEWADAEDTVETLRRKTAEHF 884
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 223/473 (47%), Gaps = 93/473 (19%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ K F GT+TD LK+T EGKFR+F F+G+ E+ A AL +FN ++V +SR+
Sbjct: 13 MKEERFKEMFAAFGTLTDCGLKFTKEGKFRKFGFVGFKTEEHADKALKHFNKSFVDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKY------AP--------------------DSSAYQKLHNIA 122
VE C + GD TK ++WSK+ AP D +Q+ ++
Sbjct: 73 TVEMCKSFGDPTKARAWSKHSRGPATAPRENNKEKKKKESPSILGKLEDDEGFQEFVSVH 132
Query: 123 PKQDLKPEHTKDSKP---------GKKSKNDPTFSDFLQL--------------HGKDVS 159
++ D+ P G+ + P D+L G D
Sbjct: 133 QNRNQVSTWANDTLPQSAAPETGQGRSQEKKPASDDYLNFDESDEEDVEEEEEDQGADKE 192
Query: 160 KLLP-----------LSNKDGEEKEEENEDE-SNNQIAHADISDMEYLKLKTKSKD---- 203
L ++ +G EE N+DE + ++ A +D Y ++ +D
Sbjct: 193 ALKSGLSDMEYLRSKVAQTEGAAVEENNDDEDAEDEPAAVQQTDGAY---GSRDRDCIQR 249
Query: 204 -TAPSD--------PSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVR 254
TAP+ PS P + ++ T+ ++ P VK++ ++ + PL A++R
Sbjct: 250 ATAPASSLDQSQGKPSKPGKQQETEPTPEF-TVKLRGCPFNVKEQQVREFMTPLKPAAIR 308
Query: 255 TTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNN 308
G Y+ + E+ KAL KNK + G+ + +++ S K G A
Sbjct: 309 IIKNATGNKTGYIYVDMRSEEEVEKALKKNKDYMGGRYIEVFR----TSVKGEGRAVRRE 364
Query: 309 NASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL 368
S + + + + ED+AESGR+F+RNL YT TE++L LF K+GPLAEV+
Sbjct: 365 KGS-----ERSFTRELKDDEEEEDVAESGRLFIRNLPYTCTEEELQDLFSKHGPLAEVVF 419
Query: 369 PIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGN 421
PID T K KG+A V++++PE+A A LDG +F GRMLHL+P K+ + +
Sbjct: 420 PIDNLTKKPKGYAFVSYMIPENAVTALAQLDGHIFQGRMLHLLPSTLKKEKAD 472
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 137/328 (41%), Gaps = 62/328 (18%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKALNKNK 279
R +VKNLPAGV ++L+ F P L V G+ A I + + +A +
Sbjct: 571 RSMSVFLVKNLPAGVTVENLEELFSPHGTLGRVLLPPAGLTAIIEYLEPTEAKQAFTR-L 629
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
++ K + + +Y + +S A K +E+ + E+ A +
Sbjct: 630 AYSKFQHVPLY-LEWAPTGVFSAAMPSKTLTPDPEPTTKTSAQEEEEEEEEEEEALGSTL 688
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-----KGFALVTFLMPEHATQA 394
F++NL++T TE+ L + F K G L I K+ DKT G+ VT+ + A +A
Sbjct: 689 FIKNLNFTTTEETLRETFSKCGTLKTCT--ISKKKDKTGQLLSMGYGFVTYRTQKAAEKA 746
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD------AFNQVVEARSKR 448
+ L HC + + +L+ A + +R K+
Sbjct: 747 IRQLQ---------------------------HCSVDDHQLELKVSERATKSAIVSRKKQ 779
Query: 449 I--------ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP---------PYGITGLVEFL 491
ILV+N+P++ +++ LF FG+L V +P P+ G V+FL
Sbjct: 780 AERKQTSSKILVRNVPFQATVREIRELFCTFGELKTVRLPKKASGTGTGPHRGFGFVDFL 839
Query: 492 QKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
K AK AF++L + T L LEWA
Sbjct: 840 TKQDAKKAFSALCHSTHLYGRRLVLEWA 867
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 557 DNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK 616
D QG P + +E EP P+ T+ ++ FN E +R P A +
Sbjct: 258 DQSQGKPS---KPGKQQETEPTPEFTVKLRGCPFNVKEQQVREFMTPLKPAAIRIIKNAT 314
Query: 617 DPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK 676
K+ GY +V + E + +ALK ++ + IE+ R++ ++ E V+R+
Sbjct: 315 GNKT-------GYIYVDMRSEEEVEKALKKNKDY-MGGRYIEVFRTS--VKGEGRAVRRE 364
Query: 677 SSNVAKQT--------------GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV 722
+ T ++ +RN+P+ + E+++LF G L V P +
Sbjct: 365 KGSERSFTRELKDDEEEEDVAESGRLFIRNLPYTCTEEELQDLFSKHGPLAEVVFPIDNL 424
Query: 723 GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
+ +G+ FV ++ A A+ L H++ R++
Sbjct: 425 -TKKPKGYAFVSYMIPENAVTALAQL--DGHIFQGRML 459
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +E+F AFG L L K G R FGFV F T+ A +A+
Sbjct: 2 SRLIVKNLPNGMKEERFKEMFAAFGTLTDCGL--KFTKEGKFRKFGFVGFKTEEHADKAL 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|194214277|ref|XP_001492007.2| PREDICTED: probable RNA-binding protein 19 [Equus caballus]
Length = 962
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/363 (46%), Positives = 221/363 (60%), Gaps = 25/363 (6%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P G+T +VEFL+
Sbjct: 576 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVTAIVEFLEPL 635
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY+KF +PLYLEWAP GVF S ++K ++ EK
Sbjct: 636 EARKAFRHLAYSKFHHIPLYLEWAPVGVF------SSSAPQKKEPQDAPVDPAEKARAVP 689
Query: 555 EEDNQQGVPEVEENVEEDEEREPE----------------PDTTLYIKNLNFNSTEDSIR 598
E PE E+ E + P TL+IKNLNF++TE++++
Sbjct: 690 ETVPDGKTPEGEKPTEGGADDSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEETLK 749
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
F K G + S +++RKK+ G LSMG+GFV++ E +ALK LQ +D H++E
Sbjct: 750 GVFSKVGTVKSCSISRKKN--KAGALLSMGFGFVEYRKPEQAQKALKQLQGHVVDSHKLE 807
Query: 659 LKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP 718
++ S R + A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLP
Sbjct: 808 VRISERATKP-ALTSARKKQVPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLP 866
Query: 719 KKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTN 778
KK+ G+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T
Sbjct: 867 KKLTGTGSHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTA 926
Query: 779 RYF 781
+F
Sbjct: 927 EHF 929
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 226/489 (46%), Gaps = 127/489 (25%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL++FN +++ +SRI
Sbjct: 13 MKEERFRQLFSAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGK--------- 139
VE C + GD TKP++WS++A QK P Q +P KDS P +
Sbjct: 73 TVEFCKSFGDPTKPRAWSRHA------QK-----PSQSKQPSKDKDSVPPETKKDDKKTK 121
Query: 140 ------KSKNDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEE 171
K K D F +FL +H K L + G+E
Sbjct: 122 AAGELEKLKEDGEFQEFLSVHQKRTQTATWANDALDTEPSKGKSKPADDYLNFDSDSGQE 181
Query: 172 KEEENEDESNNQ---------IAHADISDMEYLKLK------------------------ 198
EEE E + ++SDM+YLK K
Sbjct: 182 SEEEGAGEHPEEEDGSLEPKAAVQKELSDMDYLKSKMVKAESSSSEEEESEDEAVNCDEG 241
Query: 199 ---------------------TKSKDTAPSDPSVPPVSKA----PVHKRQY---HTIVVK 230
+ + PS PP ++A P H+++ HT+ ++
Sbjct: 242 SEAEDEDSCAIAAQQDGEGPGSGRQQGIPSRSRKPPEARAETERPAHQKEPTTPHTVKLR 301
Query: 231 NLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKG 284
P V +K++ + PL ++R G ++ F E+ KAL N+ + G
Sbjct: 302 GAPFNVTEKNVVEFLAPLKPVAIRIVRNAHGNKTGYVFVDFSSEEEVKKALKCNREYMGG 361
Query: 285 KQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRN 343
+ + +++ + N G ++ AK W+ + + ED+A+SGR+FVRN
Sbjct: 362 RYIEVFR--EKNIPTAEGPPKNS---------AKPWQGRTLGENEEEEDLADSGRLFVRN 410
Query: 344 LSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVF 403
L YT TE++L +LF +YGPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF
Sbjct: 411 LPYTSTEEELEQLFSRYGPLSELHYPIDGLTKKPKGFAFVTFMFPEHAVRAYAEVDGQVF 470
Query: 404 LGRMLHLIP 412
GRMLH++P
Sbjct: 471 QGRMLHVLP 479
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 45/210 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I ++ +K + GF V + PE A +
Sbjct: 734 LFIKNLNFDTTEETLKGVFSKVGTVKSC--SISRKKNKAGALLSMGFGFVEYRKPEQAQK 791
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VD K+ ISER + AR K++
Sbjct: 792 ALKQLQGHV-------------------VDSHKLEVRISERATKP--ALTSARKKQVPRK 830
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAK 497
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK
Sbjct: 831 QTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGSHRGFGFVDFLTKQDAK 890
Query: 498 AAFNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
AFN+L + T L LEWA V +A
Sbjct: 891 RAFNALCHSTHLYGRRLVLEWADSEVTLQA 920
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 538 NEEEGEEGEEEKKENTAEEDN--------QQGVPEVE--------ENVEEDEEREPEPDT 581
N +EG E E+E A + + QQG+P E ++EP
Sbjct: 237 NCDEGSEAEDEDSCAIAAQQDGEGPGSGRQQGIPSRSRKPPEARAETERPAHQKEPTTPH 296
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T+ ++ FN TE ++ P+A V K+ GY FV F + E +
Sbjct: 297 TVKLRGAPFNVTEKNVVEFLAPLKPVAIRIVRNAHGNKT-------GYVFVDFSSEEEVK 349
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT------------GSKIL 689
+ALK + IE+ R +N+ + K + +T ++
Sbjct: 350 KALKC-NREYMGGRYIEVFR-EKNIPTAEGPPKNSAKPWQGRTLGENEEEEDLADSGRLF 407
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
VRN+P+ + + E+E+LF +G L + P + + +GF FV F+ A RA
Sbjct: 408 VRNLPYTSTEEELEQLFSRYGPLSELHYPIDGL-TKKPKGFAFVTFMFPEHAVRA 461
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFSAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQTAL 59
>gi|194043009|ref|XP_001928191.1| PREDICTED: probable RNA-binding protein 19 [Sus scrofa]
Length = 967
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/364 (46%), Positives = 221/364 (60%), Gaps = 27/364 (7%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +IL KNLP T +L+ F FG LGRVL+P G+T +VEFL+
Sbjct: 581 LDSFSQAAAERSKTVILAKNLPAGTQAAELQETFGRFGSLGRVLLPEGGVTAIVEFLEAL 640
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY+KF VPLYLEWAP GVF+ +K E + E +K+
Sbjct: 641 EARKAFRHLAYSKFHHVPLYLEWAPMGVFSSPA-------PQKKEPQDTPAELTEKDRME 693
Query: 555 EEDNQQG-VPEVEENVEEDEEREPE----------------PDTTLYIKNLNFNSTEDSI 597
E G PEVE+ E + P TL+IKNLNF++TE+++
Sbjct: 694 PETVPCGETPEVEKPTEGGADAASAKVEEEEEEEEEEEESLPGCTLFIKNLNFSTTEETL 753
Query: 598 RRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQI 657
+ F K G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++
Sbjct: 754 KGVFSKVGAVKSCSISKKKN--KAGALLSMGFGFVEYKKPEQAQKALKQLQGHVVDGHKL 811
Query: 658 ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
E++ S R + A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRL
Sbjct: 812 EVRISERATKP-APTATRKKQVARKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRL 870
Query: 718 PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRT 777
PKKM G+G HRGFGFV+F TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T
Sbjct: 871 PKKMTGTGTHRGFGFVDFFTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKT 930
Query: 778 NRYF 781
+F
Sbjct: 931 AEHF 934
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 151/485 (31%), Positives = 231/485 (47%), Gaps = 114/485 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL++FN +++ +SRI
Sbjct: 13 MKEERFRQLFTAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGK------KSK 142
VE C + GD TKP++WSK+A S Q K + PE KD++ K K K
Sbjct: 73 TVEFCKSFGDPTKPRAWSKHAQKPS--QSKPPPKDKDSVPPEAKKDNRKKKVAGELEKLK 130
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEEN---- 176
D F +FL +H K L + G+E EEE
Sbjct: 131 KDDEFQEFLSVHQKRTQVATWANDALDAEPSKGKSKPADDYLNFDSDSGQESEEEGTRED 190
Query: 177 -EDESNN----QIAHADISDMEYLKLKTKS------------------------------ 201
E+E++ A ++SDM+YL+ K +
Sbjct: 191 PEEEADGLERKAAAQKELSDMDYLRSKVVAAESSEEEESEDEAVNFEEGSEAEEEGSCTA 250
Query: 202 --------------------KDTAPSDPSVPPVS----KAPVHKRQY---HTIVVKNLPA 234
++ P+ P+ P + + P H+R+ HT+ ++ P
Sbjct: 251 PTQQDREAAPAEVKHWSLGREEVHPASPTFPAATLLGTEKPAHQREPTTPHTVKLRGAPF 310
Query: 235 GVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLN 288
V +K++ + PL ++R G ++ F E+ KAL N+ + G+ +
Sbjct: 311 NVTEKNVMEFLAPLKPVAIRIVRNAHGNKTGYVFVDFSSEEEVKKALQCNREYMGGRYIE 370
Query: 289 IYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSYT 347
+++ +AK A N+ K W+ + + ED+A+SGR+FVRNL YT
Sbjct: 371 VFREKSIPTAK---APPKNST--------KAWQGRTLGEHEEEEDLADSGRLFVRNLPYT 419
Query: 348 VTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRM 407
+E+DL KLF KYGPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF GRM
Sbjct: 420 SSEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRM 479
Query: 408 LHLIP 412
LH++P
Sbjct: 480 LHVLP 484
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 41/208 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL+++ TE+ L +F K G + I K+ +K + GF V + PE A +
Sbjct: 739 LFIKNLNFSTTEETLKGVFSKVGAVKSC--SISKKKNKAGALLSMGFGFVEYKKPEQAQK 796
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAF------NQVVEARS 446
A + L G V VDG K+ ISER QV ++
Sbjct: 797 ALKQLQGHV-------------------VDGHKLEVRISERATKPAPTATRKKQVARKQT 837
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAA 499
ILV+N+P++ +++ LF FG+L V +P + G V+F K AK A
Sbjct: 838 TSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFFTKQDAKRA 897
Query: 500 FNSLAY-TKFKEVPLYLEWAPEGVFAEA 526
FN+L + T L LEWA V +A
Sbjct: 898 FNALCHSTHLYGRRLVLEWADSEVTLQA 925
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 22/183 (12%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
+REP T+ ++ FN TE ++ P+A V K+ GY FV
Sbjct: 294 QREPTTPHTVKLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKT-------GYVFVD 346
Query: 634 FYTRESLNQALK------------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
F + E + +AL+ V + S+ + K S + + + ++A
Sbjct: 347 FSSEEEVKKALQCNREYMGGRYIEVFREKSIPTAKAPPKNSTKAWQGRTLGEHEEEEDLA 406
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
++ VRN+P+ + + ++E+LF +G L + P + + +GF FV F+ A
Sbjct: 407 D--SGRLFVRNLPYTSSEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFVTFMFPEHA 463
Query: 742 KRA 744
+A
Sbjct: 464 VKA 466
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQTAL 59
>gi|198415693|ref|XP_002128145.1| PREDICTED: similar to RNA binding motif protein 19 [Ciona
intestinalis]
Length = 766
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 221/353 (62%), Gaps = 37/353 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF+Q RSK +I+ KNLP + ++L+ +F F +LGRV++ P G+T ++E L+
Sbjct: 422 LDAFSQPNAERSKTVIIAKNLPVGSTCSELREMFAKFAELGRVVLAPAGVTAVIECLKPA 481
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AK AF LAY KF PLYLEWAP G F K N
Sbjct: 482 EAKLAFTKLAYRKFHHSPLYLEWAPVGTF--------------------------KTNFK 515
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
E + EV+E+ EE E E D T+++KNLNF++ E+S++ HF CG + S ++R
Sbjct: 516 EFSGEAESTEVKEDSEEVE--NTEEDFTIFVKNLNFSTDEESLKTHFSSCGELKSCLISR 573
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
KK KS LSMGYGFV + ++ +ALK LQ + LDEH++ELK S R S T+ K
Sbjct: 574 KKTHKSNA-LLSMGYGFVCYARKKDGQKALKTLQGTMLDEHKLELKMSERKTNSN-TSAK 631
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS-----GLHRG 729
R+ KQ SKILVRN+PFQA E+E LFK+FGELK VR+PKK VGS G HRG
Sbjct: 632 RRFQLDKKQASSKILVRNVPFQANSGEIESLFKSFGELKSVRMPKK-VGSITAQAGSHRG 690
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVEDIRKRTNRYF 781
F FV+F+TK EAK+A +ALC STHLYGRRLVLEWA+ E D+VE +RK+T +F
Sbjct: 691 FAFVDFLTKQEAKKAFEALCHSTHLYGRRLVLEWADAEEDSVEGLRKKTATHF 743
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 198/394 (50%), Gaps = 78/394 (19%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
KI +E+LK +FE GT+TDV+L ++ GKFRRFAF+GY + A A + + + + +
Sbjct: 12 KINEEKLKKEFEPYGTITDVKLMFSKSGKFRRFAFVGYQFTENADKAKSKLDKSLILNQK 71
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG----KKSKN 143
I VE C++ G K K A+Q+ +K +K G K+ K
Sbjct: 72 ISVETCNDFGANDKVK---------EAFQR--------------SKKNKTGTTAEKQQKK 108
Query: 144 DPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKD 203
+ T DF++ +N + + K+++++DE+ + ME ++ K +
Sbjct: 109 EATDLDFIK------------ANTNSQLKDDDSDDET-------ETPKMETMQFSVKMR- 148
Query: 204 TAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYI 263
P K + + I VK+L V+K D + RT G Y+
Sbjct: 149 ------GCPFNIKEKQIREFFFPITVKSL--NVQKTDHGS----------RT---GFVYV 187
Query: 264 GFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADD-NNNASMENIKAKHWKS 322
FK E++ AL N + KG+ + ++ K +AK+ G A M+ + H
Sbjct: 188 HFKTEEDREAALKHNGDYIKGRYIELF---KQLAAKHQGKQGPYYEKAWMKKVAEGHQDC 244
Query: 323 QEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFAL 382
+ EDI+ESGR++VRNL YT TE+DL F+ +GPL+EV +P+D + K+ GF
Sbjct: 245 E------TEDISESGRLYVRNLPYTATEEDLENHFKSFGPLSEVSIPVDDMSKKSVGFGF 298
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
+T++MPEHA +A+ LDGT F GRM+H++P K K
Sbjct: 299 ITYMMPEHALKAFNSLDGTAFQGRMIHILPAKAK 332
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 31/213 (14%)
Query: 323 QEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK---- 378
+EDS + E+ E IFV+NL+++ E+ L F G L ++ K+T K+
Sbjct: 527 KEDSEE-VENTEEDFTIFVKNLNFSTDEESLKTHFSSCGELKSCLIS-RKKTHKSNALLS 584
Query: 379 -GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
G+ V + + +A + L GT+ L L + K N N K + ++
Sbjct: 585 MGYGFVCYARKKDGQKALKTLQGTMLDEHKLELKMSERKTN-SNTSAKRRFQLDKK---- 639
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY--GIT---------G 486
+A SK ILV+N+P++ ++++LF+ FG+L V +P IT
Sbjct: 640 -----QASSK--ILVRNVPFQANSGEIESLFKSFGELKSVRMPKKVGSITAQAGSHRGFA 692
Query: 487 LVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
V+FL K +AK AF +L + T L LEWA
Sbjct: 693 FVDFLTKQEAKKAFEALCHSTHLYGRRLVLEWA 725
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 139/329 (42%), Gaps = 46/329 (13%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLP-------LASVRTTFLGMAYIGFKDEKNCNKALNK-N 278
++VKNLP+ + ++ LK F+P + S F A++G++ +N +KA +K +
Sbjct: 4 LIVKNLPSKINEEKLKKEFEPYGTITDVKLMFSKSGKFRRFAFVGYQFTENADKAKSKLD 63
Query: 279 KSFWKGKQLNI---------------YKYSKDNSAKYSGAADDNNNAS-MENIKA---KH 319
KS +++++ ++ SK N + A+ ++ IKA
Sbjct: 64 KSLILNQKISVETCNDFGANDKVKEAFQRSKKNKTGTTAEKQQKKEATDLDFIKANTNSQ 123
Query: 320 WKSQEDSVQFAEDIAESGRIFV--RNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
K + + E+ + V R + + E + + F P+ L + K +
Sbjct: 124 LKDDDSDDETETPKMETMQFSVKMRGCPFNIKEKQIREFF---FPITVKSLNVQKTDHGS 180
Query: 378 K-GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+ GF V F E A +H +G GR + L +++G G + +K+
Sbjct: 181 RTGFVYVHFKTEEDREAALKH-NGDYIKGRYIELFKQLAAKHQGK-QGPYYEKAWMKKVA 238
Query: 437 AFNQVVE----ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------G 486
+Q E + S R+ V+NLPY DL+ F+ FG L V +P ++ G
Sbjct: 239 EGHQDCETEDISESGRL-YVRNLPYTATEEDLENHFKSFGPLSEVSIPVDDMSKKSVGFG 297
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYL 515
+ ++ A AFNSL T F+ +++
Sbjct: 298 FITYMMPEHALKAFNSLDGTAFQGRMIHI 326
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-----PLASVRTTF-------LGMAYIGFKDEKNCNK 273
TI VKNL ++ LK +F L S + T +G ++ + +K+ K
Sbjct: 541 TIFVKNLNFSTDEESLKTHFSSCGELKSCLISRKKTHKSNALLSMGYGFVCYARKKDGQK 600
Query: 274 ALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI 333
AL +G L+ +K S + + N+N S + + Q D Q
Sbjct: 601 ALKT----LQGTMLDEHKLELKMSERKT-----NSNTSAKR------RFQLDKKQ----- 640
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP-----IDKETDKTKGFALVTFLMP 388
S +I VRN+ + ++ LF+ +G L V +P I + +GFA V FL
Sbjct: 641 -ASSKILVRNVPFQANSGEIESLFKSFGELKSVRMPKKVGSITAQAGSHRGFAFVDFLTK 699
Query: 389 EHATQAYQHLDGTVFL-GRMLHL 410
+ A +A++ L + L GR L L
Sbjct: 700 QEAKKAFEALCHSTHLYGRRLVL 722
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 562 VPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
+ +V E ++ E + LY++NL + +TE+ + HFK GP++ V++ P
Sbjct: 234 MKKVAEGHQDCETEDISESGRLYVRNLPYTATEEDLENHFKSFGPLSEVSI-----PVDD 288
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN 679
S+G+GF+ + E +A L ++ I + L ++A KR S N
Sbjct: 289 MSKKSVGFGFITYMMPEHALKAFNSLDGTAFQGRMIHI------LPAKAKVEKRSSEN 340
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 118/316 (37%), Gaps = 42/316 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I +NL T +L ++F K+ L V+L T A++ L P A A+ L
Sbjct: 437 IIAKNLPVGSTCSELREMFAKFAELGRVVLAPAGVT------AVIECLKPAEAKLAFTKL 490
Query: 399 DGTVFLGRMLHL--IP-GKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
F L+L P G K N G+ +E K D+ +V I VKNL
Sbjct: 491 AYRKFHHSPLYLEWAPVGTFKTNFKEFSGEAES--TEVKEDS-EEVENTEEDFTIFVKNL 547
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYL 515
+ T LK F G+L L+ +K A S+ Y
Sbjct: 548 NFSTDEESLKTHFSSCGELKSCLISR----------KKTHKSNALLSMGY---------- 587
Query: 516 EWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEER 575
G A++K +K +G +E K E E + + D++
Sbjct: 588 -----GFVCYARKKD--GQKALKTLQGTMLDEHKLELKMSERKTNSNTSAKRRFQLDKK- 639
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
+ + + ++N+ F + I FK G + SV + +K + G+ FV F
Sbjct: 640 --QASSKILVRNVPFQANSGEIESLFKSFGELKSVRMPKKVGSITAQAGSHRGFAFVDFL 697
Query: 636 TRESLNQALKVLQNSS 651
T++ +A + L +S+
Sbjct: 698 TKQEAKKAFEALCHST 713
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLP-----KKMVGSGLHRGFGFVEFITKNEA 741
++ VRN+P+ A + ++E FK+FG L V +P KK V GFGF+ ++ A
Sbjct: 254 RLYVRNLPYTATEEDLENHFKSFGPLSEVSIPVDDMSKKSV------GFGFITYMMPEHA 307
Query: 742 KRAMKALCQSTHLYGRRL 759
+A +L T GR +
Sbjct: 308 LKAFNSL-DGTAFQGRMI 324
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+ V+NL + E+ L K FE YG + +V L K + K + FA V + E+A +A
Sbjct: 3 RLIVKNLPSKINEEKLKKEFEPYGTITDVKLMFSK-SGKFRRFAFVGYQFTENADKAKSK 61
Query: 398 LDGTVFLGRMLHL 410
LD ++ L + + +
Sbjct: 62 LDKSLILNQKISV 74
>gi|281343470|gb|EFB19054.1| hypothetical protein PANDA_014807 [Ailuropoda melanoleuca]
Length = 947
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/359 (45%), Positives = 221/359 (61%), Gaps = 20/359 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P G+T +VEF++
Sbjct: 564 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVTAIVEFVEPL 623
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY+KF PLYLEWAP GVF+ + ++K + K+ G GE+ + T
Sbjct: 624 EARKAFRHLAYSKFHHAPLYLEWAPVGVFSSSAPQTK---EPKDPPAGPAGEDRAEPETL 680
Query: 555 EEDNQQGVPEVEENVEEDEEREPE------------PDTTLYIKNLNFNSTEDSIRRHFK 602
+ PE E+ E E P P L+IKNLNFN+TE++++ F
Sbjct: 681 PDHE---TPEGEKPAEGGAENCPAKVEEEEEEEESLPGCALFIKNLNFNTTEETLKEVFS 737
Query: 603 KCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS 662
K G + S ++++KK+ G LSMG+GFV++ E +ALK LQ + + + S
Sbjct: 738 KVGTVRSCSISKKKN--KAGAMLSMGFGFVEYRKPEQAQKALKQLQVRAAVAYTLNNLNS 795
Query: 663 NRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV 722
A T RK + KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM
Sbjct: 796 FLQPSRPALTSARKKQVLRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMT 855
Query: 723 GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G+G HRGFGFV+F+TK +AKRA +ALC STHLYGRRLVLEWA+ +++ +R++T F
Sbjct: 856 GTGTHRGFGFVDFLTKQDAKRAFQALCHSTHLYGRRLVLEWADSEVSLQTLRRKTAERF 914
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 230/489 (47%), Gaps = 127/489 (25%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++A+ AL++FN +++ +SRI
Sbjct: 1 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFRSEEEARTALNHFNRSFIDTSRI 60
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGK--------- 139
VE C + GD TKP++WS++A QK+ Q P KDS P +
Sbjct: 61 TVEFCKSFGDPTKPRAWSRHA------QKI-----SQSKNPSKDKDSVPTEPKKVRRTRK 109
Query: 140 ------KSKNDPTFSDFLQLHGK---------DVSKLLPLSNKD-------------GEE 171
K K D F +FL +H K DV P K G+E
Sbjct: 110 VAGELEKLKEDTEFREFLSVHQKRTQTATWANDVLDAEPSKGKSKAANDYLNFDSDSGQE 169
Query: 172 KEEENEDESNNQ--------IAHADISDMEYLKLK------------------------- 198
+EE E + ++SDM+YLK K
Sbjct: 170 SDEEGAGEDPEEEDGRKPRAAVQRELSDMDYLKSKMVKSESPSSSEEEESEDEAVSCGDG 229
Query: 199 TKSKDTAPS---------------DPSVPPVSKAP----------VHKRQY---HTIVVK 230
+ +++ APS + VP ++ P H+++ +T+ ++
Sbjct: 230 SGAEEEAPSPAPAQQDRGRPGAGPEQGVPSGNETPGTARAEADKAAHQKEPTTPYTVKLR 289
Query: 231 NLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKG 284
P V +K + + PL ++R G ++ F E+ +AL ++ + G
Sbjct: 290 GAPFNVTEKSVTEFLAPLRPVAIRIVRNAHGNKTGYIFVDFSSEEEVKQALKCHREYMGG 349
Query: 285 KQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRN 343
+ + +++ +AK G ++ AK W+ + + ED+A+SGR+F+RN
Sbjct: 350 RYIEVFREKNVTTAK--GPPKNS---------AKPWQGRTLGENEEEEDLADSGRLFIRN 398
Query: 344 LSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVF 403
L YT TE+DL +LF K+GPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF
Sbjct: 399 LPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVRAYAEVDGQVF 458
Query: 404 LGRMLHLIP 412
GRMLH++P
Sbjct: 459 QGRMLHVLP 467
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 36/198 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L ++F K G + I K+ +K + GF V + PE A +
Sbjct: 718 LFIKNLNFNTTEETLKEVFSKVGTVRSC--SISKKKNKAGAMLSMGFGFVEYRKPEQAQK 775
Query: 394 AYQHLDGTVFLGRMLH-----LIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
A + L + L+ L P +P S RK QV+ ++
Sbjct: 776 ALKQLQVRAAVAYTLNNLNSFLQPSRP------------ALTSARK----KQVLRKQTTS 819
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFN 501
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK AF
Sbjct: 820 KILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFQ 879
Query: 502 SLAY-TKFKEVPLYLEWA 518
+L + T L LEWA
Sbjct: 880 ALCHSTHLYGRRLVLEWA 897
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 38/210 (18%)
Query: 559 QQGVPEVEEN-----VEEDE---EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
+QGVP E E D+ ++EP T+ ++ FN TE S+ P+A
Sbjct: 254 EQGVPSGNETPGTARAEADKAAHQKEPTTPYTVKLRGAPFNVTEKSVTEFLAPLRPVAIR 313
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K+ GY FV F + E + QALK + IE+ R E
Sbjct: 314 IVRNAHGNKT-------GYIFVDFSSEEEVKQALKC-HREYMGGRYIEVFR-----EKNV 360
Query: 671 TTVKRKSSNVAK----------------QTGSKILVRNIPFQAKQSEVEELFKAFGELKF 714
TT K N AK ++ +RN+P+ + + ++E+LF FG L
Sbjct: 361 TTAKGPPKNSAKPWQGRTLGENEEEEDLADSGRLFIRNLPYTSTEEDLEQLFSKFGPLSE 420
Query: 715 VRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ P + + +GF FV F+ A RA
Sbjct: 421 LHYPIDSL-TKKPKGFAFVTFMFPEHAVRA 449
>gi|410923148|ref|XP_003975044.1| PREDICTED: probable RNA-binding protein 19-like [Takifugu rubripes]
Length = 941
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 172/350 (49%), Positives = 230/350 (65%), Gaps = 20/350 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RS +ILVKNLP ++L+ LF G LGRVL+PP G+T +VEFL+
Sbjct: 587 LDSFSQAAAQRSTTVILVKNLPAGVASSELEELFSAHGSLGRVLLPPSGLTAIVEFLEPT 646
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AK AF LAY+KF+ VPLYLEWAP VF AK+ E+E G++E
Sbjct: 647 EAKRAFTRLAYSKFQHVPLYLEWAPGDVFVAAKQ----------EQESVTGKDEGLMEEE 696
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
E+ N + EE++E E P +TL+IKNLNF++TE++++ F KCG + S +V++
Sbjct: 697 EKKNVE-------EEEEEQEEESSPGSTLFIKNLNFSTTEETLQETFSKCGKVKSCSVSK 749
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
KKD SMGYGFVQ++ E+ +AL+ LQ+ S+D HQ++LK S R + K
Sbjct: 750 KKDKSGKSL--SMGYGFVQYHKAEAAQKALRQLQHCSVDGHQLQLKISERATRKTEVSSK 807
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
+K KQTG+KIL RNIPFQA E+ ELF FGELK VRLPKK GSG HRGFGF++
Sbjct: 808 KKQVG-KKQTGTKILARNIPFQASVRELRELFCTFGELKTVRLPKKAAGSGNHRGFGFID 866
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTA 784
F+TK++AK+A ALC STHLYGRRLVLEWA+ + VE +R++T +F A
Sbjct: 867 FVTKHDAKKAFDALCHSTHLYGRRLVLEWADAEETVEALRRKTADHFHVA 916
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 15/202 (7%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRT------TFLGMAYIGFKDEKNCNKALNKNK 279
T+ ++ +P VK+ ++ + PL A++R G Y+ + AL KNK
Sbjct: 305 TVKLRGVPFNVKELQIREFMTPLKPAAIRIGKNDSGNRTGYVYVDLHSAEQVEAALKKNK 364
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
+ G+ + +++ DNS K A D + ++ + K E+ +AESGR+
Sbjct: 365 DYIGGRYIEVFRV--DNSEK---AKRDKRDREVDRNFTRTLKEDEEEED----VAESGRL 415
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
FVRNL YT TE++L +LF K+GPL+E+ PID T KTKGFA +T+++PE+A A LD
Sbjct: 416 FVRNLPYTCTEEELKELFAKHGPLSELHFPIDSLTKKTKGFAFITYMIPENAVAALAQLD 475
Query: 400 GTVFLGRMLHLIPGKPKENEGN 421
G VF GRMLHL+P K+ + +
Sbjct: 476 GHVFQGRMLHLLPSTVKKEKAD 497
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 16/136 (11%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ K+ F GTVTD LK+T +GKFR+F F+G+ E++A AL N ++V +SR+
Sbjct: 13 MKEERFKSMFAAFGTVTDCSLKFTKDGKFRKFGFVGFRSEEEANRALAQLNKSFVDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKS------- 141
VE C GD TK K+WSK++ S + P +L P HT K K+
Sbjct: 73 TVEICKAFGDPTKAKAWSKHSQVSPTDK------PSTNLNPAHTDSKKKNKQKKETSSTL 126
Query: 142 ---KNDPTFSDFLQLH 154
+ D F +FL +H
Sbjct: 127 LNLEEDQEFKEFLSVH 142
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 114/509 (22%), Positives = 210/509 (41%), Gaps = 51/509 (10%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKY-TTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y T+E+LK F + G ++++ + K + FAFI Y + A AAL + +VF
Sbjct: 422 YTCTEEELKELFAKHGPLSELHFPIDSLTKKTKGFAFITYMIPENAVAALAQLDG-HVFQ 480
Query: 86 SRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDP 145
R+ + + K AP SS+Y++ KD+K S N
Sbjct: 481 GRM-LHLLPSTVKKEKADPSDAGAPGSSSYKR--------------QKDAKTKALSSNSH 525
Query: 146 TFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTA 205
++ L V+ ++ K K + + ES IA ++ E ++ +
Sbjct: 526 NWNTLF-LGTNAVAD--AIAEKYNTTKSQVLDHESKGSIA-VRMALGETQIVQETRQFLL 581
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYI 263
+ + S+A +R I+VKNLPAGV +L+ F L V G+ A +
Sbjct: 582 ANSVCLDSFSQAAA-QRSTTVILVKNLPAGVASSELEELFSAHGSLGRVLLPPSGLTAIV 640
Query: 264 GFKDEKNCNKALNKNKSFWKGKQLNIY-KYSKDNSAKYSGAADDNNNASMENIKAKHWKS 322
F + +A + ++ K + + +Y +++ + + ++ E + + K
Sbjct: 641 EFLEPTEAKRAFTR-LAYSKFQHVPLYLEWAPGDVFVAAKQEQESVTGKDEGLMEEEEKK 699
Query: 323 QEDSVQFAEDIAES--GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-- 378
+ + ++ S +F++NL+++ TE+ L + F K G + + K+
Sbjct: 700 NVEEEEEEQEEESSPGSTLFIKNLNFSTTEETLQETFSKCGKVKSCSVSKKKDKSGKSLS 759
Query: 379 -GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
G+ V + E A +A + L G L L + + V K
Sbjct: 760 MGYGFVQYHKAEAAQKALRQLQHCSVDGHQLQLKISERATRKTEVSSKK----------- 808
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEF 490
QV + ++ IL +N+P++ +L+ LF FG+L V +P G ++F
Sbjct: 809 -KQVGKKQTGTKILARNIPFQASVRELRELFCTFGELKTVRLPKKAAGSGNHRGFGFIDF 867
Query: 491 LQKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
+ K+ AK AF++L + T L LEWA
Sbjct: 868 VTKHDAKKAFDALCHSTHLYGRRLVLEWA 896
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 21/199 (10%)
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
+E EP T+ ++ + FN E IR P A++ + + GY +V
Sbjct: 296 QELEPATAFTVKLRGVPFNVKELQIREFMTPLKP-AAIRIGKNDSGNR------TGYVYV 348
Query: 633 QFYTRESLNQALK----VLQNSSLDEHQIE----LKRSNRNLESE---ATTVKRKSSNVA 681
++ E + ALK + ++ +++ KR R+ E + T+K
Sbjct: 349 DLHSAEQVEAALKKNKDYIGGRYIEVFRVDNSEKAKRDKRDREVDRNFTRTLKEDEEEED 408
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
++ VRN+P+ + E++ELF G L + P + + +GF F+ ++ A
Sbjct: 409 VAESGRLFVRNLPYTCTEEELKELFAKHGPLSELHFPIDSL-TKKTKGFAFITYMIPENA 467
Query: 742 KRAMKALCQSTHLYGRRLV 760
A+ L H++ R++
Sbjct: 468 VAALAQL--DGHVFQGRML 484
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ + +F AFG + L K G R FGFV F ++ EA RA+
Sbjct: 2 SRLIVKNLPNGMKEERFKSMFAAFGTVTDCSL--KFTKDGKFRKFGFVGFRSEEEANRAL 59
Query: 746 KALCQS 751
L +S
Sbjct: 60 AQLNKS 65
>gi|195042706|ref|XP_001991484.1| GH12037 [Drosophila grimshawi]
gi|193901242|gb|EDW00109.1| GH12037 [Drosophila grimshawi]
Length = 918
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/361 (43%), Positives = 231/361 (63%), Gaps = 17/361 (4%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+L AF++ + RS+ ++L KNLP T DL +F FG +GR+++PP G+T L+E+
Sbjct: 534 RLSAFDEPNQKRSRTVLLAKNLPADTAVADLSPIFSKFGPIGRLVLPPSGVTALIEYCDP 593
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
++A+ AF LAY+KFK VPLYLEWAPE F + K + E + +E
Sbjct: 594 SEARQAFKKLAYSKFKNVPLYLEWAPEHTFNQTLSGEPIIPKTEPEHKPDEAL------V 647
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEP--------DTTLYIKNLNFNSTEDSIRRHFKKCG 605
++ ++ PE + ++ E++ +TT++++NLNF + +++R HF G
Sbjct: 648 VQQPEKEAKPESKPEAKDAEDKPEAEDAEDEPEPNTTIFLRNLNFKTVMETVRAHFAHLG 707
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRN 665
+ +V +A++KDP++P Q S+GYGF+QF +QALK +Q + LD + +ELKRS+R
Sbjct: 708 TVHTVEIAKRKDPQNPRQLNSLGYGFIQFKKAAVASQALKDMQLTQLDGNLVELKRSDRV 767
Query: 666 LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GS 724
L+++ +R+ KQTG+KILVRNIPFQA+ EV E+FKAFGEL +R+PKKM G
Sbjct: 768 LKTQDDGARRRQVGQKKQTGTKILVRNIPFQAQYREVREIFKAFGELTSLRIPKKMTPGE 827
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA--EEADNVEDIRKRTNRYFG 782
HRGFGFV++ TK +AKRA AL STHLYGRRLVLEWA E+ +V+++RKRT F
Sbjct: 828 DAHRGFGFVDYTTKADAKRAFDALSASTHLYGRRLVLEWASVEDQHDVDELRKRTAAKFD 887
Query: 783 T 783
+
Sbjct: 888 S 888
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 246/442 (55%), Gaps = 55/442 (12%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
I++++L+ F KGT+TD+QLKYT +GKFR+F F+GY E +AQAA+ +FNNT + +SR+
Sbjct: 13 ISEDKLRNIFGSKGTITDLQLKYTPDGKFRQFCFVGYSSEAEAQAAIAHFNNTCIQTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGK--------- 139
+VE C+ LG KP+SWSKYA DS N+ +D +P+ SK K
Sbjct: 73 RVESCATLGSEEKPQSWSKYAKDSK-----KNLEQLKDEQPQLESKSKEKKPKSNKVDEI 127
Query: 140 --KSKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNN--------------- 182
K K+DP F +FLQ H K S + + KE+ ++DE+
Sbjct: 128 LGKHKDDPAFQEFLQAHDKTRSLWANDAGISEQTKEQASDDETTETQQAADDVDDEEADE 187
Query: 183 ------------------QIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQY 224
++A ISDMEY+K K S P K +
Sbjct: 188 AAALSKDKDNDDDDEDDEKLAEQPISDMEYMKSLMAGK--GESKPKAKENKKPDKSNLEL 245
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPLPLASVR--TTFLGMAYIGFKDEKNCNKALNKNKSFW 282
TI + N+P K++D+ +FKP SVR + G Y+GFK +++ KA+ KNKSF
Sbjct: 246 FTIKIHNVPYNTKRQDIIKFFKPQKPYSVRLPSKVHGFCYVGFKTDRDMAKAMIKNKSFI 305
Query: 283 KGKQLNIYKYSKDNSA-KYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFV 341
KGKQ+ +++ N K + D + + AK W+ Q DS++ E+I+ESGRIF
Sbjct: 306 KGKQVFFSDFTEKNKVTKATKNGLDIPDVATGGGNAK-WQQQMDSLKSEENISESGRIFF 364
Query: 342 RNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGT 401
RNL+YT TE++L KLFE++GP+ EV LP+DK T + KGF VTF++PE+A +A+ LDGT
Sbjct: 365 RNLAYTTTEEELQKLFERFGPVVEVNLPVDKVTRQIKGFGTVTFMIPENALKAFNDLDGT 424
Query: 402 VFLGRMLHLIPGKPKENEGNVD 423
F GR+LHL+PGK +N D
Sbjct: 425 DFHGRLLHLLPGKELDNAAEED 446
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 133/344 (38%), Gaps = 69/344 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ +NL DL+ +F K+GP+ ++LP T AL+ + P A QA++ L
Sbjct: 550 LLAKNLPADTAVADLSPIFSKFGPIGRLVLPPSGVT------ALIEYCDPSEARQAFKKL 603
Query: 399 DGTVFLGRMLHL-----------IPGKP-------------------KENEGNVDGKVHC 428
+ F L+L + G+P E E + K
Sbjct: 604 AYSKFKNVPLYLEWAPEHTFNQTLSGEPIIPKTEPEHKPDEALVVQQPEKEAKPESKPEA 663
Query: 429 CISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLV 488
+E K +A + E I ++NL ++T+ ++A F G + V +
Sbjct: 664 KDAEDKPEAEDAEDEPEPNTTIFLRNLNFKTVMETVRAHFAHLGTVHTVEIAKR------ 717
Query: 489 EFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEE 548
+ Q NSL Y ++++ V ++A + + + + N E + +
Sbjct: 718 ---KDPQNPRQLNSLGYG-------FIQFKKAAVASQALKDMQLTQLDGNLVELKRSDRV 767
Query: 549 -KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPI 607
K ++ Q G ++ + T + ++N+ F + +R FK G +
Sbjct: 768 LKTQDDGARRRQVG-------------QKKQTGTKILVRNIPFQAQYREVREIFKAFGEL 814
Query: 608 ASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
S+ + +K +PG+ G+GFV + T+ +A L S+
Sbjct: 815 TSLRIPKK---MTPGEDAHRGFGFVDYTTKADAKRAFDALSAST 855
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+I RN+ + + E+++LF+ FG + V LP V + +GFG V F+ A +A
Sbjct: 361 RIFFRNLAYTTTEEELQKLFERFGPVVEVNLPVDKVTRQI-KGFGTVTFMIPENALKAFN 419
Query: 747 ALCQSTHLYGRRLVLEWAEEADNV 770
L T +GR L L +E DN
Sbjct: 420 DL-DGTDFHGRLLHLLPGKELDNA 442
>gi|260834035|ref|XP_002612017.1| hypothetical protein BRAFLDRAFT_124790 [Branchiostoma floridae]
gi|229297390|gb|EEN68026.1| hypothetical protein BRAFLDRAFT_124790 [Branchiostoma floridae]
Length = 843
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 168/379 (44%), Positives = 236/379 (62%), Gaps = 51/379 (13%)
Query: 434 KLDAFNQVVEARSK----------------RIIL----VKNLPYRTLPTDLKALFEPFGD 473
KLDAF+Q AR R++L NLP T T L+ +F FG
Sbjct: 460 KLDAFSQPAAARRTEATQLQEVFSKFGQLGRVVLPPAVFINLPAGTEATQLQEVFSKFGQ 519
Query: 474 LGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTK-----------FKEVPLYLEWAPEGV 522
LGRV++PP G+T +VEFL+ ++A++AF LAYTK F+ VPLYLEWAP V
Sbjct: 520 LGRVVLPPAGVTAVVEFLEPSEARSAFYKLAYTKEYDYNICSDSQFQHVPLYLEWAPTEV 579
Query: 523 FAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTT 582
F+ ++ K+++ ++ E ++ + + + EER T
Sbjct: 580 FSTPRDTDGQKQQQ---------------DSGEHESAEEEESDSDEDQGQEER---GKCT 621
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++KNLNF++TE ++++ F CG I +VT+A KKD K+PG+ LSMGYGFV+F RES +
Sbjct: 622 LFLKNLNFDTTEATLKQRFSSCGAIRNVTIATKKDMKNPGKLLSMGYGFVEFQKRESAQK 681
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
ALK LQ+ +D H +ELK SNR ++ + ++ ++K S KQ SKILVRNIPFQA + EV
Sbjct: 682 ALKDLQHCEVDGHSLELKVSNRAVQKDDSSQRKKVSR-KKQRSSKILVRNIPFQANKREV 740
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
+ LF FGE+KFVRLP+K G+ HRGFGFVEF++K +AKRA AL STHLYGRRLVLE
Sbjct: 741 QNLFSTFGEIKFVRLPQKFGGT-QHRGFGFVEFLSKQDAKRAFNALVHSTHLYGRRLVLE 799
Query: 763 WAEEADNVEDIRKRTNRYF 781
WA+ + V+++RK+T ++
Sbjct: 800 WADTQETVDELRKKTAEHY 818
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 196/403 (48%), Gaps = 70/403 (17%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+ + ++ FE GTVTD +LKY+ G+FR F F+G+ +A+ A+ F+N+++ + RI
Sbjct: 13 ITEHKFQSMFEAVGTVTDCKLKYSKNGQFRHFGFVGFRSHQEAEKAVQQFHNSFLNTVRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
+VE C +L P W + + ++L K+ K E KP KK+K S
Sbjct: 73 QVEFCKDLSGKDTPTPWKQ---KRAKVKELLQTKQKEKGKAE-----KPEKKNKQS---S 121
Query: 149 DFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPSD 208
D L G+ + + ++ + + EE+ +E + + D ++ KT S++ A
Sbjct: 122 DSSLLLGEYLKSKVVQTSVSSDSESEEDGEEEKGEGEYKDGG----VEKKTASQEKAD-- 175
Query: 209 PSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT------TFLGMAY 262
H +T+ +K +P K+KD+K +F PL + +++ G +
Sbjct: 176 -----------HTDSNYTLRMKGVPYKAKEKDIKEFFYPLNIQALKIHRTRKGKGTGTRF 224
Query: 263 IGF-KDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWK 321
I ++E+ G+Q + K + K A D++
Sbjct: 225 IELTREERRI------------GEQESSEKEQRPWERKGQEAGDED-------------- 258
Query: 322 SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFA 381
E IAESGR+F+RNL Y E+DL LF KYGPL E +PID T + G A
Sbjct: 259 ---------ESIAESGRLFIRNLPYLCKEEDLEGLFTKYGPLTECHIPIDTFTRRAMGIA 309
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDG 424
VTF++PEHA A+ LDGTVF+GR+LH++PG+ + E G
Sbjct: 310 FVTFMLPEHAVTAFSQLDGTVFMGRLLHILPGRGRNQEEGARG 352
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 135/346 (39%), Gaps = 68/346 (19%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNS 502
+ ++NLPY DL+ LF +G L +P GI V F+ A AF+
Sbjct: 267 LFIRNLPYLCKEEDLEGLFTKYGPLTECHIPIDTFTRRAMGI-AFVTFMLPEHAVTAFSQ 325
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGE-EEKKENTAEEDNQQG 561
L T F L++ P +G+ +E+ G+EG+ ++KKE + +G
Sbjct: 326 LDGTVFMGRLLHI--LP----------GRGRNQEEGARGGKEGDFKKKKEADQKAKAGRG 373
Query: 562 VPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
+ E+ EE+E + + N+NS F +A V + KS
Sbjct: 374 RNQEEQAGGGKEEKEADQKAKAGSSH-NWNSL-------FLGENAVADVMAEKYGTTKSH 425
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLE--SEATTVKRKSSN 679
+ +RESL + + + + E + L + L+ S+ +R +
Sbjct: 426 ---------VLDADSRESLAVRMALGETQIVAETRQFLLDNGVKLDAFSQPAAARRTEAT 476
Query: 680 VAKQTGSKI-----------LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 728
++ SK + N+P + ++++E+F FG+L V LP V +
Sbjct: 477 QLQEVFSKFGQLGRVVLPPAVFINLPAGTEATQLQEVFSKFGQLGRVVLPPAGVTA---- 532
Query: 729 GFGFVEFITKNEAKRAMKAL----------CQSTHLYGRRLVLEWA 764
VEF+ +EA+ A L C + L LEWA
Sbjct: 533 ---VVEFLEPSEARSAFYKLAYTKEYDYNICSDSQFQHVPLYLEWA 575
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 124/348 (35%), Gaps = 90/348 (25%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F+ NL L ++F K+G L V+LP T A+V FL P A A+ L
Sbjct: 497 VFI-NLPAGTEATQLQEVFSKFGQLGRVVLPPAGVT------AVVEFLEPSEARSAFYKL 549
Query: 399 ------DGTVFLGRMLHLIP-----------GKPKENEGNV----DGKVHCCISERKLDA 437
D + +P P++ +G G+ E
Sbjct: 550 AYTKEYDYNICSDSQFQHVPLYLEWAPTEVFSTPRDTDGQKQQQDSGEHESAEEEESDSD 609
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYG 483
+Q E R K + +KNL + T LK F G + G++L Y
Sbjct: 610 EDQGQEERGKCTLFLKNLNFDTTEATLKQRFSSCGAIRNVTIATKKDMKNPGKLLSMGY- 668
Query: 484 ITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGE 543
G VEF ++ A+ A L + + L L+ + V + +
Sbjct: 669 --GFVEFQKRESAQKALKDLQHCEVDGHSLELKVSNRAV------------------QKD 708
Query: 544 EGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK 603
+ + KK + R+ + + + ++N+ F + + ++ F
Sbjct: 709 DSSQRKKVS----------------------RKKQRSSKILVRNIPFQANKREVQNLFST 746
Query: 604 CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
G I V + P+ G G+GFV+F +++ +A L +S+
Sbjct: 747 FGEIKFVRL-----PQKFGGTQHRGFGFVEFLSKQDAKRAFNALVHST 789
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +I VRN+ + + ++ LF +G + V LP + +GF V FL + A +A+
Sbjct: 723 SSKILVRNIPFQANKREVQNLFSTFGEIKFVRLPQKFGGTQHRGFGFVEFLSKQDAKRAF 782
Query: 396 QHL-DGTVFLGRMLHL 410
L T GR L L
Sbjct: 783 NALVHSTHLYGRRLVL 798
>gi|312374833|gb|EFR22311.1| hypothetical protein AND_15450 [Anopheles darlingi]
Length = 867
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/351 (49%), Positives = 221/351 (62%), Gaps = 7/351 (1%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+L+AF+ RS +ILVKNL L+ +FE FG LGRV++PP G+T +VEFL
Sbjct: 472 QLNAFDAPNPKRSSTLILVKNLAPNCTKEALREMFEKFGILGRVVLPPSGVTAIVEFLDP 531
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
++A+ AF LAYT F+ PLYLEWAPE F KE ++ +E E T
Sbjct: 532 SEARRAFKKLAYTNFQSQPLYLEWAPENTFKSPTAPDDVKEVKEESNGNSTVKESPDEET 591
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
VP+ EE ED+ EPE TTL+IKNL+F + E +I+ F+K GPI SV +
Sbjct: 592 VRAAAGTNVPKKEEEPLEDDT-EPEEGTTLFIKNLSFKTVEATIQERFRKVGPIHSVQIV 650
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
R K+ S G S GYGF+QF R+S + ALK LQ +D IEL RS+R L++ A
Sbjct: 651 RTKNLVSGGPTESRGYGFIQFKHRKSADHALKNLQLVQIDGRPIELARSDRVLKTAADEA 710
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFG 731
RKS KQTGSKILVRNIPFQA SE+ +LFK +G + +RLP+KMV + HRGFG
Sbjct: 711 -RKSKAGPKQTGSKILVRNIPFQANASEIRDLFK-YGTV--LRLPRKMVANADESHRGFG 766
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFG 782
FVEF+ + +AKRA + L +STHLYGRRLVLEWA D VE++RKRT + FG
Sbjct: 767 FVEFVREPDAKRAFETLGRSTHLYGRRLVLEWAAPDDGVEELRKRTAQQFG 817
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 214/400 (53%), Gaps = 33/400 (8%)
Query: 34 LKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKC 93
+++ F G +TDVQLKYT EGKFR F FIG+ E+QA A+ +FNNT++ +S+I V C
Sbjct: 2 VQSHFSTCGIITDVQLKYTPEGKFRNFGFIGFENEEQAAKAIKHFNNTFIRTSKISVAPC 61
Query: 94 SNLGDTTKPKSWSKYA--PDSSAYQKLHNIAPKQD---------LKPEHTKDSKPGKKSK 142
LG+T K WSK+A P + + A + D KP+ ++ +
Sbjct: 62 VALGETKNLKIWSKHAQKPVPGSDENGSKSADENDNTEFSAGKGEKPKAPTAKTILERHQ 121
Query: 143 NDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKL--KTK 200
NDP F +FL+ H K KL+ D + ++ E E + A D K+
Sbjct: 122 NDPKFQEFLEAH-KRAGKLV----WDNQFQQSEAESTTKTPSVAASSGDESTGGKFEKST 176
Query: 201 SKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT--TFL 258
K ++P P ++ V+NLPA K++D+ +FK SVR
Sbjct: 177 GKKVKSAEPKKPAIT--------LFVAKVRNLPATTKRQDMLRFFKTAKPYSVRIPPKNK 228
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G AY+GFK E KAL +KSF GKQ+ I ++ N+ SG ++ N +AK
Sbjct: 229 GFAYVGFKTEIELEKALLMDKSFLGGKQVRIVNFTDQNNRAASG---EDKNGERRAKQAK 285
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK 378
W+ Q +V +E I ESG++F RNL+Y+V E DL ++FEKYGP+ EV +PID T K K
Sbjct: 286 -WERQRVNVP-SESICESGKLFFRNLAYSVKEQDLREIFEKYGPVVEVDVPIDSNTRKLK 343
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
GF VTFLMPEHA AY L+GT GRM H++P K E+
Sbjct: 344 GFGTVTFLMPEHAVMAYSELNGTFLQGRMFHILPAKVDED 383
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 141/346 (40%), Gaps = 68/346 (19%)
Query: 217 APVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLP-LASVRTTFLGM-AYIGFKDEKNCNKA 274
AP KR I+VKNL K+ L+ F+ L V G+ A + F D +A
Sbjct: 478 APNPKRSSTLILVKNLAPNCTKEALREMFEKFGILGRVVLPPSGVTAIVEFLDPSEARRA 537
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADD--------NNNASM------ENIKAKHW 320
K Q +++ +N+ K A DD N N+++ E ++A
Sbjct: 538 FKKLAYTNFQSQPLYLEWAPENTFKSPTAPDDVKEVKEESNGNSTVKESPDEETVRAAAG 597
Query: 321 ----KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET-- 374
K +E+ ++ + E +F++NLS+ E + + F K GP+ V + K
Sbjct: 598 TNVPKKEEEPLEDDTEPEEGTTLFIKNLSFKTVEATIQERFRKVGPIHSVQIVRTKNLVS 657
Query: 375 ---DKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCIS 431
+++G+ + F + A A ++L L I G+P + S
Sbjct: 658 GGPTESRGYGFIQFKHRKSADHALKNL--------QLVQIDGRP----------IELARS 699
Query: 432 ERKLDAFNQVVEARSKRI--------ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYG 483
+R L EAR + ILV+N+P++ ++++ LF+ G VL P
Sbjct: 700 DRVLK--TAADEARKSKAGPKQTGSKILVRNIPFQANASEIRDLFK----YGTVLRLPRK 753
Query: 484 IT----------GLVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
+ G VEF+++ AK AF +L T L LEWA
Sbjct: 754 MVANADESHRGFGFVEFVREPDAKRAFETLGRSTHLYGRRLVLEWA 799
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 170/458 (37%), Gaps = 96/458 (20%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
VRNL T D+ + F+ P + I P K KGFA V F +A +D
Sbjct: 197 VRNLPATTKRQDMLRFFKTAKPYSVRIPP------KNKGFAYVGFKTEIELEKAL-LMDK 249
Query: 401 TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-----ILVKNL 455
+ G+ + ++ + N + ++ Q V S+ I + +NL
Sbjct: 250 SFLGGKQVRIVNFTDQNNRAASGEDKNGERRAKQAKWERQRVNVPSESICESGKLFFRNL 309
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYTKFK 509
Y DL+ +FE +G + V VP T G V FL A A++ L T +
Sbjct: 310 AYSVKEQDLREIFEKYGPVVEVDVPIDSNTRKLKGFGTVTFLMPEHAVMAYSELNGTFLQ 369
Query: 510 EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
++ A K E K E G+ + KKE T ++ Q
Sbjct: 370 GRMFHILPA------------KVDEDMKEGENGDSNFKRKKEQTQKKQAQS--------- 408
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
+ N+N+ G A KK S L
Sbjct: 409 -----------------SHNWNTL---------FMGENAVAVAMAKKYGTSKDAILMSTE 442
Query: 630 GFVQFYTRESLNQALKVLQNSS-LDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKI 688
G R +L + VL+ S L ++ I+L +A KR S + I
Sbjct: 443 GSTSAAVRLALGETEVVLEMQSFLQDNGIQLN------AFDAPNPKRSS--------TLI 488
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
LV+N+ + + E+F+ FG L V LP V + VEF+ +EA+RA K L
Sbjct: 489 LVKNLAPNCTKEALREMFEKFGILGRVVLPPSGVTA-------IVEFLDPSEARRAFKKL 541
Query: 749 CQSTHLYGRRLVLEWAEE--------ADNVEDIRKRTN 778
T+ + L LEWA E D+V+++++ +N
Sbjct: 542 AY-TNFQSQPLYLEWAPENTFKSPTAPDDVKEVKEESN 578
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 44/233 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+NL+ T++ L ++FEK+G L V+LP T A+V FL P A +A++ L
Sbjct: 488 ILVKNLAPNCTKEALREMFEKFGILGRVVLPPSGVT------AIVEFLDPSEARRAFKKL 541
Query: 399 DGTVFLGRMLHL---------IPGKP-------KENEGN-----------VDGKVHCCIS 431
T F + L+L P P +E+ GN V +
Sbjct: 542 AYTNFQSQPLYLEWAPENTFKSPTAPDDVKEVKEESNGNSTVKESPDEETVRAAAGTNVP 601
Query: 432 ERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV------PPYGIT 485
+++ + E + +KNL ++T+ ++ F G + V + G T
Sbjct: 602 KKEEEPLEDDTEPEEGTTLFIKNLSFKTVEATIQERFRKVGPIHSVQIVRTKNLVSGGPT 661
Query: 486 -----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGK 533
G ++F + A A +L + P+ L + + A E K K
Sbjct: 662 ESRGYGFIQFKHRKSADHALKNLQLVQIDGRPIELARSDRVLKTAADEARKSK 714
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 33/198 (16%)
Query: 579 PDTTLYI---KNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
P TL++ +NL + + R FK P SV + K + G+ +V F
Sbjct: 188 PAITLFVAKVRNLPATTKRQDMLRFFKTAKPY-SVRIPPK----------NKGFAYVGFK 236
Query: 636 TRESLNQALKVLQNSSLDEHQIEL----KRSNR-------NLESEATTVK--RKSSNVAK 682
T L +AL ++ S L Q+ + ++NR N E A K R+ NV
Sbjct: 237 TEIELEKAL-LMDKSFLGGKQVRIVNFTDQNNRAASGEDKNGERRAKQAKWERQRVNVPS 295
Query: 683 QT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
++ K+ RN+ + K+ ++ E+F+ +G + V +P L +GFG V F+
Sbjct: 296 ESICESGKLFFRNLAYSVKEQDLREIFEKYGPVVEVDVPIDSNTRKL-KGFGTVTFLMPE 354
Query: 740 EAKRAMKALCQSTHLYGR 757
A A L T L GR
Sbjct: 355 HAVMAYSEL-NGTFLQGR 371
>gi|301779826|ref|XP_002925333.1| PREDICTED: probable RNA-binding protein 19-like [Ailuropoda
melanoleuca]
Length = 963
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 164/359 (45%), Positives = 217/359 (60%), Gaps = 38/359 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P G+T +VEF++
Sbjct: 576 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVTAIVEFVEPL 635
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY+KF PLYLEWAP GVF+ + ++K + K+ G GE+ + T
Sbjct: 636 EARKAFRHLAYSKFHHAPLYLEWAPVGVFSSSAPQTK---EPKDPPAGPAGEDRAEPETL 692
Query: 555 EEDNQQGVPEVEENVEEDEEREPE------------PDTTLYIKNLNFNSTEDSIRRHFK 602
+ PE E+ E E P P L+IKNLNFN+TE++++ F
Sbjct: 693 PDHE---TPEGEKPAEGGAENCPAKVEEEEEEEESLPGCALFIKNLNFNTTEETLKEVFS 749
Query: 603 KCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS 662
K G + S ++++KK+ G LSMG+GFV++ E +ALK LQ
Sbjct: 750 KVGTVRSCSISKKKN--KAGAMLSMGFGFVEYRKPEQAQKALKQLQVRP----------- 796
Query: 663 NRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV 722
A T RK + KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM
Sbjct: 797 -------ALTSARKKQVLRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMT 849
Query: 723 GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G+G HRGFGFV+F+TK +AKRA +ALC STHLYGRRLVLEWA+ +++ +R++T F
Sbjct: 850 GTGTHRGFGFVDFLTKQDAKRAFQALCHSTHLYGRRLVLEWADSEVSLQTLRRKTAERF 908
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 231/489 (47%), Gaps = 127/489 (25%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++A+ AL++FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFRSEEEARTALNHFNRSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPT-- 146
VE C + GD TKP++WS++A QK+ Q P KDS P + K+D T
Sbjct: 73 TVEFCKSFGDPTKPRAWSRHA------QKI-----SQSKNPSKDKDSVPTEPKKDDRTRK 121
Query: 147 -------------FSDFLQLHGK---------DVSKLLPLSNKD-------------GEE 171
F +FL +H K DV P K G+E
Sbjct: 122 VAGELEKLKEDTEFREFLSVHQKRTQTATWANDVLDAEPSKGKSKAANDYLNFDSDSGQE 181
Query: 172 KEEENEDESNNQ--------IAHADISDMEYLKLK------------------------- 198
+EE E + ++SDM+YLK K
Sbjct: 182 SDEEGAGEDPEEEDGRKPRAAVQRELSDMDYLKSKMVKSESPSSSEEEESEDEAVSCGDG 241
Query: 199 TKSKDTAPS---------------DPSVPPVSKAP----------VHKRQY---HTIVVK 230
+ +++ APS + VP ++ P H+++ +T+ ++
Sbjct: 242 SGAEEEAPSPAPAQQDRGRPGAGPEQGVPSGNETPGTARAEADKAAHQKEPTTPYTVKLR 301
Query: 231 NLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKG 284
P V +K + + PL ++R G ++ F E+ +AL ++ + G
Sbjct: 302 GAPFNVTEKSVTEFLAPLRPVAIRIVRNAHGNKTGYIFVDFSSEEEVKQALKCHREYMGG 361
Query: 285 KQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRN 343
+ + +++ +AK G ++ AK W+ + + ED+A+SGR+F+RN
Sbjct: 362 RYIEVFREKNVTTAK--GPPKNS---------AKPWQGRTLGENEEEEDLADSGRLFIRN 410
Query: 344 LSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVF 403
L YT TE+DL +LF K+GPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF
Sbjct: 411 LPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVRAYAEVDGQVF 470
Query: 404 LGRMLHLIP 412
GRMLH++P
Sbjct: 471 QGRMLHVLP 479
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 38/210 (18%)
Query: 559 QQGVPEVEEN-----VEEDE---EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
+QGVP E E D+ ++EP T+ ++ FN TE S+ P+A
Sbjct: 266 EQGVPSGNETPGTARAEADKAAHQKEPTTPYTVKLRGAPFNVTEKSVTEFLAPLRPVAIR 325
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K+ GY FV F + E + QALK + IE+ R E
Sbjct: 326 IVRNAHGNKT-------GYIFVDFSSEEEVKQALKC-HREYMGGRYIEVFR-----EKNV 372
Query: 671 TTVKRKSSNVAK----------------QTGSKILVRNIPFQAKQSEVEELFKAFGELKF 714
TT K N AK ++ +RN+P+ + + ++E+LF FG L
Sbjct: 373 TTAKGPPKNSAKPWQGRTLGENEEEEDLADSGRLFIRNLPYTSTEEDLEQLFSKFGPLSE 432
Query: 715 VRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ P + + +GF FV F+ A RA
Sbjct: 433 LHYPIDSL-TKKPKGFAFVTFMFPEHAVRA 461
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFRSEEEARTAL 59
Query: 746 KALCQS 751
+S
Sbjct: 60 NHFNRS 65
>gi|348551182|ref|XP_003461409.1| PREDICTED: probable RNA-binding protein 19-like [Cavia porcellus]
Length = 961
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/359 (47%), Positives = 226/359 (62%), Gaps = 15/359 (4%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +IL KNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 573 LDSFSQAAAERSKTVILAKNLPAGTLAAELQETFSRFGSLGRVLLPEGGITAIVEFLEPL 632
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG--------E 546
+A+ AF LAY+KF VPLYLEWAP G+F+ + K +K + GE+ E
Sbjct: 633 EARKAFRHLAYSKFHHVPLYLEWAPIGIFSSTAPQEKVPQKAATQPTGEDEEEPEAADME 692
Query: 547 EEKKENTAEEDNQQGVPEVEENVEEDEEREPE----PDTTLYIKNLNFNSTEDSIRRHFK 602
+ E AEE E EE+EE E E P TL+IKNLNF++TE+++++ F
Sbjct: 693 TPETEKPAEEGTAAPTTRTEGGGEEEEEEEEEEESLPGCTLFIKNLNFDTTEETLKKVFS 752
Query: 603 KCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS 662
K G + S ++++KK G LSMG+GFV++ E +AL+ LQ +D H++E++ S
Sbjct: 753 KAGALRSCSISKKK--SKAGALLSMGFGFVEYKKPEHAQKALRQLQGHVVDGHKVEVRIS 810
Query: 663 NRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV 722
R + A T K KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM
Sbjct: 811 ERATKP-AMTSSWKKQVPRKQTTSKILVRNIPFQADLREIRELFSTFGELKTVRLPKKMA 869
Query: 723 GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
G+G HRGFGFV+F TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +F
Sbjct: 870 GTGRHRGFGFVDFFTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAEHF 928
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 153/492 (31%), Positives = 226/492 (45%), Gaps = 111/492 (22%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +G+FR+F FIG+ E +AQ AL +F+ +++ ++R+
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGQFRKFGFIGFKSEAEAQRALSHFHKSFIDTARV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYA--PDSSAYQKLHNIAP--KQDLKPEHTKDSKPGKKSKND 144
VE C + GD TKP++WSK+A P + + P KQD K D + K K D
Sbjct: 73 TVEFCKSFGDPTKPRAWSKHAQKPTQTKKSSQDSTGPETKQDKKKRGPSDLE---KLKED 129
Query: 145 PTFSDFLQLHGK---------DVSKLLPLSNKD------------------------GEE 171
F +FL +H K D+ P K G E
Sbjct: 130 AEFQEFLSVHQKRMQVATWANDMLNTEPAKGKSKPASDYLNFDSDSGQESEEEAEASGPE 189
Query: 172 KEEENEDESNNQIAHADISDMEYLKLKT-------------------------------- 199
EEE +D + ++SDMEYLK K
Sbjct: 190 PEEE-QDLGPKEAVRKELSDMEYLKSKVVRADSASSSEEEESEDEAVNCDESAAEEEKES 248
Query: 200 ---KSKDT----------APSDPSVPPVSKAPVHKRQY-------HTIVVKNLPAGVKKK 239
++T AP P V KA V K +T+ ++ P V +K
Sbjct: 249 TMPAQQETERRAAGLGHRAPPGHGSPQVRKAEVEKAANQKEPTTPYTVKLRGAPFNVTEK 308
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ F E+ KAL N+ + G+ + +++
Sbjct: 309 NVTEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSSEEEVKKALKCNREYMGGRYIEVFR-- 366
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ A + A N++ K W+ + + ED+A+SGR+FVRNL YT TE+D
Sbjct: 367 -EKQAPVAKAPPKNSS--------KAWQGRTLGENEEEEDLADSGRLFVRNLPYTSTEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF YGPL+E+ PID T K KGFA VTFL PEHA +AY +DG VF GRMLH++P
Sbjct: 418 LEKLFSAYGPLSELHYPIDTLTKKPKGFAFVTFLFPEHAVKAYAEVDGQVFQGRMLHVLP 477
Query: 413 GKPKENEGNVDG 424
K+ G G
Sbjct: 478 STIKKEAGEEAG 489
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 92/206 (44%), Gaps = 37/206 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK---TKGFALVTFLMPEHATQAY 395
+F++NL++ TE+ L K+F K G L + K + GF V + PEHA +A
Sbjct: 733 LFIKNLNFDTTEETLKKVFSKAGALRSCSISKKKSKAGALLSMGFGFVEYKKPEHAQKAL 792
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAF------NQVVEARSKR 448
+ L G V VDG KV ISER QV ++
Sbjct: 793 RQLQGHV-------------------VDGHKVEVRISERATKPAMTSSWKKQVPRKQTTS 833
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP-------YGITGLVEFLQKNQAKAAFN 501
ILV+N+P++ +++ LF FG+L V +P + G V+F K AK AFN
Sbjct: 834 KILVRNIPFQADLREIRELFSTFGELKTVRLPKKMAGTGRHRGFGFVDFFTKQDAKRAFN 893
Query: 502 SLAY-TKFKEVPLYLEWAPEGVFAEA 526
+L + T L LEWA V +A
Sbjct: 894 ALCHSTHLYGRRLVLEWADSEVTLQA 919
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 32/203 (15%)
Query: 560 QGVPEVEENVEEDEEREPEPDT--TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
G P+V + E + EP T T+ ++ FN TE ++ P+A V
Sbjct: 271 HGSPQVRKAEVEKAANQKEPTTPYTVKLRGAPFNVTEKNVTEFLAPLKPVAIRIVRNAHG 330
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
K+ GY FV F + E + +ALK + IE+ R E +A K
Sbjct: 331 NKT-------GYIFVDFSSEEEVKKALKC-NREYMGGRYIEVFR-----EKQAPVAKAPP 377
Query: 678 SNVAKQ----------------TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM 721
N +K ++ VRN+P+ + + ++E+LF A+G L + P
Sbjct: 378 KNSSKAWQGRTLGENEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSAYGPLSELHYPIDT 437
Query: 722 VGSGLHRGFGFVEFITKNEAKRA 744
+ + +GF FV F+ A +A
Sbjct: 438 L-TKKPKGFAFVTFLFPEHAVKA 459
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+RA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGQFRKFGFIGFKSEAEAQRAL 59
Query: 746 KALCQS 751
+S
Sbjct: 60 SHFHKS 65
>gi|194768695|ref|XP_001966447.1| GF22183 [Drosophila ananassae]
gi|190617211|gb|EDV32735.1| GF22183 [Drosophila ananassae]
Length = 939
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 233/358 (65%), Gaps = 9/358 (2%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+L AF++ + RS +IL KNLP T +L +F FG +GR+++PP G+T L+E+
Sbjct: 547 RLSAFDEPAKKRSNTVILAKNLPAATEVAELTPIFSRFGPIGRIVLPPSGVTALIEYCDP 606
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEE---GEEGEEEKK 550
++A+ AF LAY+KFK PLYLEWAPE VF + K + +EE + ++
Sbjct: 607 SEARHAFKKLAYSKFKTAPLYLEWAPEHVFTKTLSGEPTIPKSEPKEEVSKSKGKSKKDA 666
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
+ E++ ++ + +E ED EPEPDTTL+++NLNF +T++++ +HF+ G I ++
Sbjct: 667 KKEEEQEKEEEEEKPKEPEPEDAHDEPEPDTTLFLRNLNFKTTKETVEKHFRHLGTIHTL 726
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
+A +KD ++P S+GYGF+QF ALK +Q + +D + +E+KRS+R L+S+
Sbjct: 727 EIAVRKDAQNPSNVHSLGYGFIQFKKAAVAEHALKNMQLTHIDGNPVEIKRSDRVLKSQD 786
Query: 671 T-TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV---GSGL 726
+R+ + KQTG+K LVRNIPFQA EV ++FKAFGELK +R+PKK G
Sbjct: 787 NEGAQRRLTAQKKQTGTKFLVRNIPFQATYHEVRDIFKAFGELKSLRIPKKATSGAGGES 846
Query: 727 HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA--EEADNVEDIRKRTNRYFG 782
HRGFGFV+++ K EAKRA +A+ STHLYGRRLVLEW+ ++ +VE++RKRT FG
Sbjct: 847 HRGFGFVDYMNKAEAKRAFEAISASTHLYGRRLVLEWSANDDGQDVEELRKRTAAKFG 904
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/438 (39%), Positives = 245/438 (55%), Gaps = 53/438 (12%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+E+L+ F +GT+TD+QLKYT +GKFR+F F+GY ED+AQAA+ +F+NT + +SR+
Sbjct: 13 ITEEKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGYSTEDEAQAAIKHFDNTCIQTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDS--------------SAYQKLHNIAPKQDLKPEHTKD 134
+VE C+ LG KP+SWSKYA DS +A +K K K + D
Sbjct: 73 RVESCAALGSEAKPQSWSKYAKDSKKNLDKLKAEEAAAAAAEKAKEKLKKSKEKKTNKVD 132
Query: 135 SKPGKKSKNDPTFSDFLQLH----------------------------------GKDVSK 160
GK K+DP F +FLQ H G+D S
Sbjct: 133 EILGK-HKDDPEFQEFLQAHDKTRTLWGNDMALNEEADDDQDDDDDQEDEESPAGRDDSG 191
Query: 161 LLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDT-APSDPSVPPVSKAPV 219
+ + E+ + + E+E ++A ISD+EY+K + K + A + +KA
Sbjct: 192 VDADAGDAEEDDDHDEEEEEAEKLAVKPISDLEYMKSLMEGKSSEAKAKTPAAKKTKADK 251
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT--TFLGMAYIGFKDEKNCNKALNK 277
+ TI + N+P K++D+ +FKP SVR G Y+GFK EK+ KA+ K
Sbjct: 252 SNLELFTIKIHNVPYNTKRQDVLKFFKPQKPYSVRLPGKVHGFCYVGFKTEKDMAKAMLK 311
Query: 278 NKSFWKGKQLNIYKYSKDNSA-KYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
NKSF KGKQ+ +++ N K S A E+ WK Q+D++ +DI+ES
Sbjct: 312 NKSFIKGKQVFFSDFTEKNKVTKASKAGQPVPAVGPESSGNAKWKQQQDNLSKEDDISES 371
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
GRIF RNL+YT TE++L KLFE++GP+ EV LP+DK T K KGF VT++MPEHA +A+
Sbjct: 372 GRIFFRNLAYTTTEEELQKLFEQFGPVVEVSLPVDKLTRKIKGFGTVTYMMPEHALKAFN 431
Query: 397 HLDGTVFLGRMLHLIPGK 414
LDGT F GR+LHL+PGK
Sbjct: 432 ALDGTDFHGRLLHLLPGK 449
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 38/202 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTF---LMPEH 390
+F+RNL++ T++ + K F G + + + + K+ + G+ + F + EH
Sbjct: 699 LFLRNLNFKTTKETVEKHFRHLGTIHTLEIAVRKDAQNPSNVHSLGYGFIQFKKAAVAEH 758
Query: 391 ATQAYQ--HLDGT-VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSK 447
A + Q H+DG V + R ++ K ++NEG ++R+L A + +
Sbjct: 759 ALKNMQLTHIDGNPVEIKRSDRVL--KSQDNEG----------AQRRLTAQKKQTGTK-- 804
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----------GLVEFLQKNQAK 497
LV+N+P++ +++ +F+ FG+L + +P + G V+++ K +AK
Sbjct: 805 --FLVRNIPFQATYHEVRDIFKAFGELKSLRIPKKATSGAGGESHRGFGFVDYMNKAEAK 862
Query: 498 AAFNSL-AYTKFKEVPLYLEWA 518
AF ++ A T L LEW+
Sbjct: 863 RAFEAISASTHLYGRRLVLEWS 884
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 122/323 (37%), Gaps = 69/323 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
I +NL Y T +L+ LFE FG + V +P +T G V ++ A AFN+L
Sbjct: 374 IFFRNLAYTTTEEELQKLFEQFGPVVEVSLPVDKLTRKIKGFGTVTYMMPEHALKAFNAL 433
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
T F L+L GK+ EK + + ++ E D
Sbjct: 434 DGTDFHGRLLHL--------------LPGKDIEKKDPQ---------DDLDENDASLSFK 470
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E + + ++P TL+ L N+ D + + FK S Q
Sbjct: 471 EKKALKLKKNAQKPIGWNTLF---LGANAVADLLAKQFK----------------TSKEQ 511
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
L G R +L + V +E+KR LE E + K+
Sbjct: 512 ILDTSGGGSGAAVRLALGETQIV----------VEMKRF---LEEEGVRLSAFDEPAKKR 558
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ + IL +N+P + +E+ +F FG + + LP V + +E+ +EA+
Sbjct: 559 SNTVILAKNLPAATEVAELTPIFSRFGPIGRIVLPPSGVTA-------LIEYCDPSEARH 611
Query: 744 AMKALCQSTHLYGRRLVLEWAEE 766
A K L S L LEWA E
Sbjct: 612 AFKKLAYS-KFKTAPLYLEWAPE 633
>gi|47226530|emb|CAG08546.1| unnamed protein product [Tetraodon nigroviridis]
Length = 944
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/348 (48%), Positives = 231/348 (66%), Gaps = 21/348 (6%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RS +ILVKNLP ++L+ LF G LGRVL+PP G+T +VEFL+
Sbjct: 615 LDSFSQAAAPRSTSVILVKNLPAGVASSELEELFSAHGSLGRVLLPPSGLTAIVEFLEPT 674
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AK AF LAY+KF+ VPLYLEWAP GVF A++ EEE +
Sbjct: 675 EAKRAFTRLAYSKFQHVPLYLEWAPVGVFVAAQQ-----------------EEEPGKEEK 717
Query: 555 EEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
+ ++ V + +++ EE+EE E P +TL+IKNLNF++TE +++ F KCG + S +V+
Sbjct: 718 VMEEEKNVEDGDKDDEEEEEEEESTPGSTLFIKNLNFSTTEQTLQEIFSKCGKVKSCSVS 777
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
+KKD SMGYGFVQ++ E+ +AL+ LQ+ ++D HQ++LK S R + +
Sbjct: 778 KKKDKSGKSL--SMGYGFVQYHKAEAAQKALRQLQHCNVDGHQLQLKISERATRKKVVSG 835
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
K+K KQTG+K+LVRNIPFQA E+ ELF FGELK VRLPKK G+G HRGFGF+
Sbjct: 836 KKKQVG-KKQTGTKLLVRNIPFQASVRELRELFCTFGELKTVRLPKKAAGTGNHRGFGFI 894
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+F+TK +AK+A ALC STHLYGRRLVLEWA+ + VE +R++T +F
Sbjct: 895 DFVTKQDAKKAFDALCHSTHLYGRRLVLEWADAEETVEALRRKTAEHF 942
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 120/205 (58%), Gaps = 14/205 (6%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRT------TFLGMAYIGFKDEKNCNKALNKNK 279
T+ ++ +P VK++ ++ + PL A++R G Y+ E+ KAL KNK
Sbjct: 306 TVKLRGVPFNVKEQQIREFMTPLKPAAIRIGKNDSGNRTGYVYVDLHSEEQVEKALKKNK 365
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
+ G+ + +++ DNS A D + ++ ++ K E+ ED+AESGR+
Sbjct: 366 DYIGGRYIEVFRV--DNSG--GKARRDKRDKDIDRSFTRNLKEGEEE----EDVAESGRL 417
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
FVRNL YT TE++L +LF K+GPL+E+ PID T K+KGFA +T+++PE+A A LD
Sbjct: 418 FVRNLPYTCTEEELKELFTKHGPLSEMHFPIDSLTKKSKGFAFITYMIPENAVAALAQLD 477
Query: 400 GTVFLGRMLHLIPGKPKENEGNVDG 424
G +F GRMLHL+P K+ + + D
Sbjct: 478 GHIFQGRMLHLLPSTIKKEKADSDA 502
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 76/129 (58%), Gaps = 6/129 (4%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ K+ F GTVTD LK+T +GKFR+F F+G+ E++A AL + N ++V +SR+
Sbjct: 13 MKEERFKSMFAAFGTVTDCTLKFTKDGKFRKFGFVGFRSEEEANRALKHLNKSFVDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKN---DP 145
VE C GD TK K+WSK++ + + +I+P L P+ K + +N D
Sbjct: 73 TVEICKAFGDPTKAKAWSKHSQKPATDKP--SISPNPAL-PDSKKKKETTSTLENLDEDQ 129
Query: 146 TFSDFLQLH 154
F +FL +H
Sbjct: 130 KFKEFLSVH 138
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ + +F AFG + L K G R FGFV F ++ EA RA+
Sbjct: 2 SRLIVKNLPNGMKEERFKSMFAAFGTVTDCTL--KFTKDGKFRKFGFVGFRSEEEANRAL 59
Query: 746 KALCQS 751
K L +S
Sbjct: 60 KHLNKS 65
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 22/200 (11%)
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
+E EP T+ ++ + FN E IR P A++ + + GY +V
Sbjct: 297 QETEPATGFTVKLRGVPFNVKEQQIREFMTPLKP-AAIRIGKNDSGNR------TGYVYV 349
Query: 633 QFYTRESLNQALK---------VLQNSSLDEHQIELKRSNRNLE---SEATTVKRKSSNV 680
++ E + +ALK ++ +D + +R R+ + S +K
Sbjct: 350 DLHSEEQVEKALKKNKDYIGGRYIEVFRVDNSGGKARRDKRDKDIDRSFTRNLKEGEEEE 409
Query: 681 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 740
++ VRN+P+ + E++ELF G L + P + + +GF F+ ++
Sbjct: 410 DVAESGRLFVRNLPYTCTEEELKELFTKHGPLSEMHFPIDSL-TKKSKGFAFITYMIPEN 468
Query: 741 AKRAMKALCQSTHLYGRRLV 760
A A+ L H++ R++
Sbjct: 469 AVAALAQL--DGHIFQGRML 486
>gi|158292878|ref|XP_314164.4| AGAP005249-PA [Anopheles gambiae str. PEST]
gi|157017199|gb|EAA09490.4| AGAP005249-PA [Anopheles gambiae str. PEST]
Length = 862
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 163/360 (45%), Positives = 211/360 (58%), Gaps = 29/360 (8%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF+ RS +IL KNL L+ LF PFG LGRV++PP +T ++EFL +
Sbjct: 476 LDAFSSTDAKRSSTVILAKNLAPGCTAAALRKLFAPFGLLGRVVLPPSAVTAVIEFLDPS 535
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG----EEEKK 550
+A+ AF LAY+ F+ +PLYLEWAP G F G G EE K
Sbjct: 536 EARKAFKKLAYSMFESLPLYLEWAPVGTFT----------------SGPSGPPSTEEPSK 579
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
+TA E+ EE +D EPE TTL+IKNL+F + ED+IR F+ G I V
Sbjct: 580 SSTAPENASNA---TEEATVDDT--EPEEGTTLFIKNLSFTTNEDAIRERFRCVGAIHMV 634
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES-- 668
V R D G+ S GYGF+QF R+ + ALK LQ+ +D +EL RS+R L +
Sbjct: 635 QVVRSMDLSGNGRNESRGYGFIQFKRRQVADYALKNLQSVQIDGRTVELARSDRTLRTAQ 694
Query: 669 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--L 726
E ++ + KQTG KILVRNIPFQA EV +LFK FG++K +RLPKKM S
Sbjct: 695 EGAERRKGAKGAQKQTGCKILVRNIPFQASAKEVRDLFKPFGDIKSLRLPKKMAASADDT 754
Query: 727 HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTAVG 786
HRGF FVE+ +++AKRA L +STHLYGRRLVLEWA ++VE++RKRT F + G
Sbjct: 755 HRGFCFVEYDEESDAKRAFDTLGRSTHLYGRRLVLEWAAADNDVEELRKRTAEQFNSRDG 814
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 217/397 (54%), Gaps = 41/397 (10%)
Query: 31 QEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKV 90
+ ++++ F G +TDVQLKYT+EGKFR F FIG+ E+QA A+ +FNN+Y+ +S+I V
Sbjct: 15 EAKVRSHFSTCGIITDVQLKYTSEGKFRNFGFIGFESEEQATKAIAHFNNSYIRTSKITV 74
Query: 91 EKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKN------- 143
C L ++ K WSK+A + + + P +D K+ + +K+
Sbjct: 75 AACVALSESKNLKVWSKHAQKPATTE---TVEPAKDESKAKGKEKPKAQTAKDVLGQYEK 131
Query: 144 DPTFSDFLQLH---GKDV-SKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKT 199
DP F +FL H GK V LL E+ E E++S + + D+ K K
Sbjct: 132 DPKFQEFLSAHKRAGKSVWDNLL--------EQSTEAEEKSVSGDSAVDVEPPAEAKAKD 183
Query: 200 KSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT--TF 257
+ + A P V + A VH N+P+ K++DL +FK + SVR
Sbjct: 184 EDEKKAAKKPMVS-LFVAKVH----------NIPSSTKRQDLIRFFKTVKPYSVRIPPKQ 232
Query: 258 LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G AY+GFK E +KAL NKSF GKQ+ I+ ++ ++A AA + A + K
Sbjct: 233 SGFAYVGFKTESELSKALLMNKSFLGGKQVKIFDFTARSAAH---AAQEKPEA--KQGKQ 287
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
W+ Q+ + +E I ESGR+F RNL+Y+V E D+ LFE+YGP+AEV +PID T K
Sbjct: 288 AKWERQKANAS-SEAICESGRLFFRNLAYSVQESDIRTLFEQYGPVAEVDVPIDSNTRKL 346
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGK 414
KGF VTF++PEHA AY L+GT GRM H++P K
Sbjct: 347 KGFGTVTFMIPEHAVTAYNELNGTFLQGRMFHILPAK 383
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 135/332 (40%), Gaps = 58/332 (17%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS--VRTTFLGMAYIGFKDEKNCNKALNKN 278
KR I+ KNL G L+ F P L V A I F D KA K
Sbjct: 485 KRSSTVILAKNLAPGCTAAALRKLFAPFGLLGRVVLPPSAVTAVIEFLDPSEARKAFKK- 543
Query: 279 KSFWKGKQLNIY---------------KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
++ + L +Y S + +K S A ++ +NA+ +
Sbjct: 544 LAYSMFESLPLYLEWAPVGTFTSGPSGPPSTEEPSKSSTAPENASNAT-----------E 592
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGP--LAEVILPID---KETDKTK 378
E +V E E +F++NLS+T ED + + F G + +V+ +D ++++
Sbjct: 593 EATVDDTEP-EEGTTLFIKNLSFTTNEDAIRERFRCVGAIHMVQVVRSMDLSGNGRNESR 651
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCI--SERKLD 436
G+ + F + A A ++L GR + L D + +ER+
Sbjct: 652 GYGFIQFKRRQVADYALKNLQSVQIDGRTVEL---------ARSDRTLRTAQEGAERRKG 702
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG---------L 487
A + K ILV+N+P++ +++ LF+PFGD+ + +P
Sbjct: 703 AKGAQKQTGCK--ILVRNIPFQASAKEVRDLFKPFGDIKSLRLPKKMAASADDTHRGFCF 760
Query: 488 VEFLQKNQAKAAFNSLA-YTKFKEVPLYLEWA 518
VE+ +++ AK AF++L T L LEWA
Sbjct: 761 VEYDEESDAKRAFDTLGRSTHLYGRRLVLEWA 792
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 544 EGEEEKKENTAEEDNQQGV-PEVEENVEEDEEREP--EPDTTLYIK---NLNFNSTEDSI 597
E E +E + D+ V P E ++++E++ +P +L++ N+ ++ +
Sbjct: 155 EQSTEAEEKSVSGDSAVDVEPPAEAKAKDEDEKKAAKKPMVSLFVAKVHNIPSSTKRQDL 214
Query: 598 RRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQI 657
R FK P SV + K+ G+ +V F T L++AL ++ S L Q+
Sbjct: 215 IRFFKTVKPY-SVRIPPKQS----------GFAYVGFKTESELSKAL-LMNKSFLGGKQV 262
Query: 658 EL----KRSNRNLESEATTVK--------RKSSNVAKQT---GSKILVRNIPFQAKQSEV 702
++ RS + E K R+ +N + + ++ RN+ + ++S++
Sbjct: 263 KIFDFTARSAAHAAQEKPEAKQGKQAKWERQKANASSEAICESGRLFFRNLAYSVQESDI 322
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
LF+ +G + V +P L +GFG V F+ A A L T L GR
Sbjct: 323 RTLFEQYGPVAEVDVPIDSNTRKL-KGFGTVTFMIPEHAVTAYNEL-NGTFLQGR 375
Score = 39.3 bits (90), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 69/181 (38%), Gaps = 33/181 (18%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
V N+ + DL + F+ P + I P K GFA V F ++A L
Sbjct: 202 VHNIPSSTKRQDLIRFFKTVKPYSVRIPP------KQSGFAYVGFKTESELSKAL--LMN 253
Query: 401 TVFLG------------RMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
FLG H KP+ +G +K +A ++ + S R
Sbjct: 254 KSFLGGKQVKIFDFTARSAAHAAQEKPEAKQGK-----QAKWERQKANASSEAI-CESGR 307
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNS 502
+ +NL Y +D++ LFE +G + V VP T G V F+ A A+N
Sbjct: 308 LFF-RNLAYSVQESDIRTLFEQYGPVAEVDVPIDSNTRKLKGFGTVTFMIPEHAVTAYNE 366
Query: 503 L 503
L
Sbjct: 367 L 367
>gi|403281594|ref|XP_003932266.1| PREDICTED: probable RNA-binding protein 19 [Saimiri boliviensis
boliviensis]
Length = 960
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 172/361 (47%), Positives = 227/361 (62%), Gaps = 21/361 (5%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 574 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGITAIVEFLEPL 633
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE------KEKNEEEG---EEG 545
+A+ AF LAY+KF VPLYLEWAP GVF+ A + K + EK++ E G
Sbjct: 634 EARKAFRHLAYSKFHHVPLYLEWAPVGVFSGAAPQKKEPQDAPPEPTEKDQAEPGTVSSG 693
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKC 604
E + EN EE ++EE EE+EE E P TL+IKNLNF++TE+ ++ F K
Sbjct: 694 ETPEDENPTEEAADSSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKV 753
Query: 605 GPIASVTVARKKDPKS-PGQFLSMGYGF---VQFYTRESLNQALKVLQNSSLDEHQIELK 660
G + S ++++KK+ P + + GF +Q TR + LQ +D+H++E++
Sbjct: 754 GTVKSCSISKKKNKAGIPHEIPAGRSGFPKTLQLQTR------VLRLQGHIVDDHKLEVR 807
Query: 661 RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
S R + A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK
Sbjct: 808 ISERATKP-AMTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKK 866
Query: 721 MVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRY 780
M G+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+ ++ +R++T +
Sbjct: 867 MTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADTEVTLQALRRKTAAH 926
Query: 781 F 781
F
Sbjct: 927 F 927
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 155/480 (32%), Positives = 232/480 (48%), Gaps = 111/480 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL +FN +++ +SRI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKTEEEAQKALKHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD TKP++WSK+A S ++ +PK PE KD K +K K
Sbjct: 73 TVEFCKSFGDPTKPRAWSKHAQKPSQPKE----SPKDSATPEMKKDEKKKKVAGQLEKLK 128
Query: 143 NDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEEN---- 176
D F +FL +H K S L + G+E EEE
Sbjct: 129 EDTEFQEFLSVHQRRAQAATWANDGLDAEPSRGKSKLASDYLNFDSDSGQESEEEGAGED 188
Query: 177 -EDESNNQIAHA---DISDMEYLKLK---------------------------------- 198
E+E+N + A ++SDM+YLK K
Sbjct: 189 LEEEANFERKAAVQKELSDMDYLKSKMVKARSSSSSEEEESEDEAVHCDEGSEVEEEGSS 248
Query: 199 ------------TKSKDTAPSDPSVPPVSKA----PVHKRQ---YHTIVVKNLPAGVKKK 239
+ P+ PP ++A P ++++ HT+ ++ P V +K
Sbjct: 249 ATPALQERDGKGVGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNVTEK 308
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL +VR G ++ F +E+ KAL N+ + G+ + +++
Sbjct: 309 NVMEFLAPLKPVAVRIVRNAHGNKTGYIFVDFSNEEEVKKALKCNREYMGGRYIEVFR-- 366
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ N G ++ AK W+ + + ED+AESGR+FVRNL YT TE+D
Sbjct: 367 EKNVPTTKGPPKNS---------AKSWQGRMLGENEEEEDLAESGRLFVRNLPYTSTEED 417
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L KLF KYGPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYSEVDGQVFQGRMLHVLP 477
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 39/199 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F++NL++ TE+ L ++F K G + I K+ +K +P
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSC--SISKKKNKAG--------IPHEIPAGRSGF 781
Query: 399 DGTVFL-GRMLHLIPGKPKENEGNV--DGKVHCCISERKLDAFNQVVEARSKRI------ 449
T+ L R+L L +G++ D K+ ISER + AR K++
Sbjct: 782 PKTLQLQTRVLRL--------QGHIVDDHKLEVRISERATKP--AMTSARKKQVPRKQTT 831
Query: 450 --ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAF 500
ILV+N+P++ +++ LF FG+L V +P + G V+FL K AK AF
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 501 NSLAY-TKFKEVPLYLEWA 518
N+L + T L LEWA
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 30/187 (16%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
++EP T+ ++ FN TE ++ P+A V K+ GY FV
Sbjct: 287 QKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVAVRIVRNAHGNKT-------GYIFVD 339
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL---- 689
F E + +ALK + IE+ R E T K N AK ++L
Sbjct: 340 FSNEEEVKKALKC-NREYMGGRYIEVFR-----EKNVPTTKGPPKNSAKSWQGRMLGENE 393
Query: 690 ------------VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
VRN+P+ + + ++E+LF +G L + P + + +GF FV F+
Sbjct: 394 EEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFVTFMF 452
Query: 738 KNEAKRA 744
A +A
Sbjct: 453 PEHAVKA 459
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F T+ EA++A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKTEEEAQKAL 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|348686579|gb|EGZ26394.1| hypothetical protein PHYSODRAFT_484800 [Phytophthora sojae]
Length = 768
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 242/793 (30%), Positives = 377/793 (47%), Gaps = 123/793 (15%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEG-KFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
+ +L+ F +G VTD + T +G K RRF F+G+ QA+ A +F+ ++ + R
Sbjct: 30 VDSARLREHFAAQGEVTDACVIRTKDGSKSRRFGFVGFKSAKQAEQARKFFHQSFFDTCR 89
Query: 88 I--KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDP 145
I +V GD +P WSKY+ S YQKLH PE + G S
Sbjct: 90 INVRVALSKESGDMERP--WSKYSVGSGRYQKLH---------PESS-----GVTSGEFE 133
Query: 146 TFSDFLQLH---------------GKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADIS 190
F + +Q GK +K + L+ D E+ ++E E+ +
Sbjct: 134 EFMETMQARSKTKFWANDDVQGPEGKTATKGVGLA--DAEDSDDEYEELEAAKSDDDADE 191
Query: 191 DMEYLKLKTKSKDTAPSD---------PSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDL 241
D + K K A SD S A + + ++NLP ++DL
Sbjct: 192 DEADAESKKSKKSEAMSDMDFLRSKKIASSGEADAAAEDDKPTARLFLRNLPFTAVEEDL 251
Query: 242 KAY---FKP-----LPLASVRTTFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKY 292
+A + P +PL R G ++ F+ + AL N ++G++L++ +
Sbjct: 252 EALCSTYGPVEEVHMPLDETRRR-KGYGFVLFRTTVDAQTALTALNGMAFQGRRLHVI-F 309
Query: 293 SKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
++ K D + N+ K K E +Q + N SY +
Sbjct: 310 ARSKRVKL----DPEAALADPNLTYKQRKELERQIQAQKKTGW-------NASYIRGDAT 358
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
+ L E+ G I+ DK +G V + E ++ D G L+ I
Sbjct: 359 VGSLAERMGVKRGEIM------DKEQGNMAVRLAIGE-TMLVKENKDFFAREGVDLNAIE 411
Query: 413 G----KPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALF 468
G KP + + +K++ RS +IL+KNLP+ T +L LF
Sbjct: 412 GALVKKPSQQQ-----------QSKKIE--------RSTTVILIKNLPHTTEEEELAQLF 452
Query: 469 EPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKE 528
G++GR L+PP +VEFL+ ++A+ AF SLAY K++ VPLYLEWAP VF
Sbjct: 453 RKHGEIGRFLLPPSKTLAVVEFLEPSEARKAFRSLAYKKYQHVPLYLEWAPVKVFDRPAT 512
Query: 529 KSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNL 588
S + +E++G K +A VP+V+ +E + + T+ +KNL
Sbjct: 513 ASSSAKAPTSEQKG------IKSTSAV------VPDVD---DEGDTAVGDASHTICVKNL 557
Query: 589 NFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQ 648
NF + E ++ + F++CG + VTVAR+KDPK LSMG+GFV++ + +AL+ LQ
Sbjct: 558 NFTTKEAALEKIFERCGKLRKVTVARRKDPKRG--MLSMGFGFVEYVDAKHTERALQTLQ 615
Query: 649 NSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELF 706
N+ +D H + LK S + +A+ +++ G SKI+VRN+ F+A +E+ ELF
Sbjct: 616 NTVVDGHALNLKLSQK----KASAAPKRAVGEVDGEGRKSKIIVRNVAFEATSNEIRELF 671
Query: 707 KAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
AFG+LK VR+PKK G HRGF FVEF+T+ EA+ A AL S+HLYGR LVLEWAE+
Sbjct: 672 GAFGQLKRVRMPKKF--DGRHRGFAFVEFLTEQEARNAFSALA-SSHLYGRHLVLEWAED 728
Query: 767 ADNVEDIRKRTNR 779
AD+++ +R + R
Sbjct: 729 ADDIDTLRAKATR 741
>gi|301103392|ref|XP_002900782.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
gi|262101537|gb|EEY59589.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
Length = 758
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 234/786 (29%), Positives = 382/786 (48%), Gaps = 119/786 (15%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEG-KFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
+ +L+ F +G VTD + T +G K RRF F+G+ QA+ A +F+ ++ + +
Sbjct: 30 VDSARLREHFAAQGEVTDACVIRTKDGSKSRRFGFVGFKSSTQAEQARKFFHQSFFDTCK 89
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTF 147
I V + WSKY+ S YQKLH+ + + + ++ + SK
Sbjct: 90 INVRVALARESDDMERPWSKYSAGSGRYQKLHSESGVTSGEFQEFMETMQAR-SKTKFWA 148
Query: 148 SDFLQ--LHGKDVSKLLPLSNKDGEEKE---------EENEDESNNQIAHAD----ISDM 192
+D +Q GK +K + +++ + + E +E+E++S ++ +SDM
Sbjct: 149 NDDVQGPTDGKTATKGVDIADAEDSDDEYQELDTMKPDEDEEDSTEKVKKGKKSEAMSDM 208
Query: 193 EYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAY---FKP-- 247
++L+ K SK A ++ P + V+NLP ++DL+A + P
Sbjct: 209 DFLRSKM-SKSEAGTEDDKPTAR-----------LFVRNLPFTAVEEDLEALCSTYGPVE 256
Query: 248 ---LPLASVRTTFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGA 303
+PL R G ++ F+ + AL N ++G++L++ +++ K
Sbjct: 257 EVHMPLDDTRRR-KGYGFVLFRTTVDAQAALTTLNGMAFQGRRLHVI-FARSKPVKL--- 311
Query: 304 ADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL 363
D + N+ K K E +Q + N SY + + L E+ G
Sbjct: 312 -DPEAALADPNLSYKQRKELERQIQAQKKTGW-------NASYIRGDATVGSLAERMGVK 363
Query: 364 AEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPG----KPKENE 419
I+ DK +G V + E ++ D G L+ I G KP + +
Sbjct: 364 RGEIM------DKEQGNMAVRLAIGE-TMLVKENKDFFAREGVDLNAIEGALVKKPTQQQ 416
Query: 420 GNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV 479
+K++ RS +IL+KNLP+ T +L LF G++GR L+
Sbjct: 417 A------------KKIE--------RSTTVILIKNLPHTTDEEELAQLFRKHGEIGRFLL 456
Query: 480 PPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNE 539
PP +VEFL+ ++A+ AF SLAY K++ VPLYLEWAP VF +
Sbjct: 457 PPSKTLAVVEFLEPSEARKAFRSLAYKKYQHVPLYLEWAPVKVFDRPASST--------- 507
Query: 540 EEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDT----TLYIKNLNFNSTED 595
NT+ + Q+G+ V + ++ T+ +KNLNF++ E
Sbjct: 508 ------------NTSSSE-QKGIKTTSAVVPDVDDDADAAVGDACHTICVKNLNFSTKEP 554
Query: 596 SIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEH 655
++ + F +CG + VTVAR+KDPK LSMG+GFV++ + +AL+ LQN+ +D H
Sbjct: 555 ALEKIFARCGKLRKVTVARRKDPKRG--MLSMGFGFVEYVDAKDTERALQTLQNTVVDGH 612
Query: 656 QIELKRSNRNLESEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELK 713
+ LK S + +A+T ++++ G SKI+VRN+ F+A +E+ ELF AFG+LK
Sbjct: 613 ALNLKLSQK----KASTAPKRAAGEVDGEGRKSKIIVRNVAFEATSNEIRELFGAFGQLK 668
Query: 714 FVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDI 773
VR+PKK G HRGF FVEF+T+ EA+ A AL S+HLYGR LVLEWAE+AD+++ +
Sbjct: 669 RVRMPKKF--DGRHRGFAFVEFLTEQEARNAFSALA-SSHLYGRHLVLEWAEDADDIDTL 725
Query: 774 RKRTNR 779
R + R
Sbjct: 726 RAKATR 731
>gi|170048416|ref|XP_001852664.1| multiple RNA-binding domain-containing protein 1 [Culex
quinquefasciatus]
gi|167870542|gb|EDS33925.1| multiple RNA-binding domain-containing protein 1 [Culex
quinquefasciatus]
Length = 302
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 153/301 (50%), Positives = 203/301 (67%), Gaps = 14/301 (4%)
Query: 484 ITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGE 543
++ ++EFL ++AK AF LAYT+FK +PLYLEWAPE FA +E KN E
Sbjct: 1 MSAIIEFLDPSEAKKAFKKLAYTRFKSLPLYLEWAPENTFAT-------EESRKNAAMSE 53
Query: 544 EGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK 603
E ++ K + + ++ +P V+ E +++REPE TTL+IKNL+F + ED+IR F+
Sbjct: 54 ETKKSSKTDAQTLEKEEEIP-VKRQEEPEDDREPEEGTTLFIKNLSFQTREDAIRDTFRH 112
Query: 604 CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN 663
GPI SV V R+KD + S GYGFVQF R+S + ALK +Q+ +D Q+EL RS+
Sbjct: 113 VGPIHSVQVVRRKDGERNE---SRGYGFVQFKLRKSADTALKNMQSVRIDGRQVELSRSD 169
Query: 664 RNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG 723
R L ++A RK++ V KQTG+KILVRN+PFQA E+ +LFK FGELK VRLPKKMV
Sbjct: 170 RTLNTDAAG-GRKATKVKKQTGTKILVRNVPFQANVKELRDLFKVFGELKSVRLPKKMVS 228
Query: 724 SG--LHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
HRGF FV+F+ + +AKRA + +CQSTHLYGRRLVLEWAE D VE++RKRT F
Sbjct: 229 GADESHRGFCFVDFMAEPDAKRAFETMCQSTHLYGRRLVLEWAEAEDGVEELRKRTAEQF 288
Query: 782 G 782
G
Sbjct: 289 G 289
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 46/230 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
+F++NLS+ ED + F GP+ +V+ D E ++++G+ V F + + A A +
Sbjct: 92 LFIKNLSFQTREDAIRDTFRHVGPIHSVQVVRRKDGERNESRGYGFVQFKLRKSADTALK 151
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
++ GR + L N G+ V+ ++ ILV+N+P
Sbjct: 152 NMQSVRIDGRQVELSRSDRTLNTDAAGGRKAT------------KVKKQTGTKILVRNVP 199
Query: 457 YRTLPTDLKALFEPFGDLGRVLVPPYGITG---------LVEFLQKNQAKAAFNSLAY-T 506
++ +L+ LF+ FG+L V +P ++G V+F+ + AK AF ++ T
Sbjct: 200 FQANVKELRDLFKVFGELKSVRLPKKMVSGADESHRGFCFVDFMAEPDAKRAFETMCQST 259
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEE 556
L LEWA E E+G EE ++ TAE+
Sbjct: 260 HLYGRRLVLEWA----------------------EAEDGVEELRKRTAEQ 287
>gi|393239414|gb|EJD46946.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 769
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 238/818 (29%), Positives = 367/818 (44%), Gaps = 153/818 (18%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T+ +L+ F KG VTDV++ Y +G RRF F+GY E+ A+ AL+YF+ TYV +S+I
Sbjct: 16 LTESRLREHFAAKGLVTDVKVLYNQDGSSRRFGFVGYKTEEDARKALEYFDRTYVGTSKI 75
Query: 89 KVEKCSNLGDTTKPKSWSKY---APDSSAYQKLHNIAPKQDLKPEHTKDSKPG------K 139
V+ D P+ + PD A L K + D KP K
Sbjct: 76 SVQVVQGTKDAPPPRPHKRPRLEGPDDEAAAALATT-----FKSKSQTDKKPAVEPPAKK 130
Query: 140 KSKNDPTFSDFLQLHGKDVSKLLPLSNKDG---------EEKEEENEDESNNQIAHADIS 190
K +F+++ K K SN D EE + EDE+ + +S
Sbjct: 131 NDKKGAQLDEFIKVM-KPTKKGAMWSNGDDVPTPVAPAREETMDVEEDEAAPEEVPEGVS 189
Query: 191 DMEYLKLKTK---------------------SKDTAPSDPSVPPVSKAPVHKRQYHT--- 226
D+E+++ + K +K A S P+ P P + + T
Sbjct: 190 DLEWMQRRMKNTALDDEDHKAFQQSDDEDDAAKSKAKSKPAEEP---KPADEEEQDTPSA 246
Query: 227 -IVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFK--DEKNCNKAL 275
+ V+NL + DLK++F +PL + T G+A++ + DE + +
Sbjct: 247 RLFVRNLAFSCTESDLKSHFSAHGTLVQVHIPLDTANKTSKGLAFVTYSTPDEASAAREA 306
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
SF +G+ L+I A + A+ + K + K Q ++ + A
Sbjct: 307 LDGTSF-QGRLLHILP-----------AIERRKPAAPADPKTQTLKQQREAAK----KAN 350
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYG-PLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
+G+ F + Y + + + E+ P ++++ P D T A V + E
Sbjct: 351 AGKEFNWAMLYMNADAVASSVAERMNVPKSDILNP--DSADPTS--AAVKLALAE----- 401
Query: 395 YQHLDGTVFLGRMLHLIPGKPK--ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
H+I K E G V L++F RS IILV
Sbjct: 402 -------------THVITETKKYFEEHGVV------------LESFATGRTQRSSTIILV 436
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVP 512
KN+PY T L LF P G L R+L+PP G +VEF ++A++AF +AY +
Sbjct: 437 KNIPYGTTSAQLTELFAPHGALVRLLIPPAGTIAVVEFAHADEARSAFKGVAYKRLGSAV 496
Query: 513 LYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN---- 568
+YLEWAP+G+F + KGKE ++ GV VEE
Sbjct: 497 VYLEWAPQGMF--RPDAPKGKE-----------------------DKGGVVRVEEKEVPV 531
Query: 569 VEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
V EE E + TTL++KNL F++ D++R + V K DPK G+ LSMG
Sbjct: 532 VAPAEEGEVKAGTTLFVKNLAFSTNSDALRAVVARMQGFVFARVQMKPDPKRLGEMLSMG 591
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKI 688
YGFV F T + +AL+ LQ LD H++ +K + R E EA + + + +K+
Sbjct: 592 YGFVGFATADDAKRALEGLQGYILDGHELRVKFAGRGREDEAQ--DSRDGAIGGKKSAKM 649
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+V+N+PF+A + ++ LF A G LK VRLPKK + RGF F+EF++ EA+ A A
Sbjct: 650 IVKNVPFEATRKDLRALFGAHGHLKSVRLPKKF--NSRSRGFAFLEFVSHQEAEHAF-AT 706
Query: 749 CQSTHLYGRRLVLEWA----EEADNVEDIRKRTNRYFG 782
+ TH GR LVLEWA + + VE++R++ R G
Sbjct: 707 LRHTHFLGRHLVLEWASSEGDAQEKVEELRRKVGRERG 744
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+FV+NL+++ D L + + + + + + + G+ V F + A +
Sbjct: 546 LFVKNLAFSTNSDALRAVVARMQGFVFARVQMKPDPKRLGEMLSMGYGFVGFATADDAKR 605
Query: 394 AYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
A + L G + G L + G+ +E+E D+ + + + ++V
Sbjct: 606 ALEGLQGYILDGHELRVKFAGRGREDEAQ--------------DSRDGAIGGKKSAKMIV 651
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAYT 506
KN+P+ DL+ALF G L V +P G +EF+ +A+ AF +L +T
Sbjct: 652 KNVPFEATRKDLRALFGAHGHLKSVRLPKKFNSRSRGF-AFLEFVSHQEAEHAFATLRHT 710
Query: 507 KFKEVPLYLEWA-PEGVFAEAKEKSKGKEKEKNEEEGEEGE 546
F L LEWA EG +A+EK + ++ E G+ GE
Sbjct: 711 HFLGRHLVLEWASSEG---DAQEKVEELRRKVGRERGDGGE 748
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 221/772 (28%), Positives = 370/772 (47%), Gaps = 131/772 (16%)
Query: 34 LKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKC 93
LK +FE+ G +TD ++ T +G R+F FIG+ EDQAQ A+ N Y+ SS+++V
Sbjct: 18 LKQQFEKFGGITDCKVMRTPQGVSRKFGFIGFENEDQAQTAITKMNGAYIQSSKLQVSLA 77
Query: 94 SNLGDTTKPKSWSKYAPDSSAYQ--KLHNIAPKQDLKPEHTKDSKPG-KKSKNDPTFSDF 150
+GD T + WSKY+ SS++ K I P TK P KK K + +
Sbjct: 78 KAIGDQTIERPWSKYSVGSSSFSNDKKRKIIP--------TKHETPTIKKKKVSSSLDEL 129
Query: 151 LQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHAD---ISDMEYLKLKTKSKDTAPS 207
++ + KL DG++K+ ++ED+ NNQ D I++ E+ K
Sbjct: 130 KKIANERRPKL-----DDGKKKKTDSEDDQNNQQMEEDEEMINEQEHQK----------- 173
Query: 208 DPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLG 259
+ + V + I + NLP + D++ F LP+ + G
Sbjct: 174 -----SMDEIDVKDWEEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKG 228
Query: 260 MAYIGFKDEKNCNKALNK-NKSFWKGKQLNI-YKYSKDNSAKYSGAADDNNNASMENIKA 317
++ F ++ KA N+ + F KG+ +++ Y + S++ +G + + +KA
Sbjct: 229 FGFVLFVVPQDAVKACNEMDNKFIKGRIVHVTYAKADPYSSQQTGESKNYKEKKQNELKA 288
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
K +G F + Y + ++ + E+ G E IL ++ E+
Sbjct: 289 K-----------------AGNQFNWSTLYMRQDTAVSAVAEELGMKKEEILDVNAESMAV 331
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
+ +++ + T+ + +G V+C + E
Sbjct: 332 RVALAENYVI--NQTKKWLEENG-------------------------VNCAVLE----- 359
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAK 497
N + E RS II+VKN+ + ++K+LFE FG L + L+P LVEF N AK
Sbjct: 360 -NGMKEKRSNNIIIVKNIAASAIDLEVKSLFEKFGTLKQFLMPKSKALALVEFEIANDAK 418
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA--- 554
AF L Y++++ +PLYLEWAPE VF E K K +E++ +E+ + ++++ +
Sbjct: 419 TAFKRLVYSRYRGIPLYLEWAPEKVFDEEKLNKKMEEEKLTQEQQSKTKQKEDDQKKKED 478
Query: 555 ------------------EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDS 596
EED + E VEE + TLYIKNL+F + ED
Sbjct: 479 KTKQKEDKKKQEEGKTKQEEDKAITKTDQPELVEEGSK-------TLYIKNLSFKTKEDV 531
Query: 597 IRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQ 656
IR+ F+KCG + +VT+++ KD K + G+GFV++ E A+K LQ +D H
Sbjct: 532 IRKVFEKCGRVLAVTLSKTKDKKVEK---NSGFGFVEYARHEDAINAIKTLQGKVIDGHA 588
Query: 657 IELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVR 716
++++ S ++ E K + + +K+LV+N+PF+ EV ELF+ +G L+ VR
Sbjct: 589 VQIEISQPKVKDEDH--KERKEIEEHKVSNKLLVKNVPFETNIKEVRELFRTYGTLRGVR 646
Query: 717 LPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
LPKK+ G ++GF FVE+ TK EA AM AL +++H YGR L++E+A++ +
Sbjct: 647 LPKKV--DGQNKGFAFVEYATKQEAANAMAAL-KNSHFYGRHLIIEYAKDTE 695
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 56/251 (22%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSL- 503
I++KNLP R LK FE FG + +V+ P G++ G + F ++QA+ A +
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGVSRKFGFIGFENEDQAQTAITKMN 63
Query: 504 -AYTKFKEVPLYLE-----------WAPEGVFAEAKEKSKGK------------------ 533
AY + ++ + L W+ V + + K +
Sbjct: 64 GAYIQSSKLQVSLAKAIGDQTIERPWSKYSVGSSSFSNDKKRKIIPTKHETPTIKKKKVS 123
Query: 534 ------EKEKNEEEGEEGEEEKKENTAEED-NQQGVPEVEENVEEDEEREP--EPDTT-- 582
+K NE + + +KK+ +E+D N Q + E EE + E E ++ E D
Sbjct: 124 SSLDELKKIANERRPKLDDGKKKKTDSEDDQNNQQMEEDEEMINEQEHQKSMDEIDVKDW 183
Query: 583 ----LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
+YI NL FN TED IR+ F + G IA + + K K S G+GFV F +
Sbjct: 184 EEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKK-----SKGFGFVLFVVPQ 238
Query: 639 SLNQALKVLQN 649
+A + N
Sbjct: 239 DAVKACNEMDN 249
>gi|325185984|emb|CCA20488.1| RNAbinding protein putative [Albugo laibachii Nc14]
Length = 754
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 244/802 (30%), Positives = 370/802 (46%), Gaps = 137/802 (17%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYT-TEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
+ +L+A FE +G VTD + T + K RRF F+GY DQA+ A YF+ TY S +
Sbjct: 19 VDNARLRAHFESQGEVTDAAVVLTKADKKSRRFGFVGYKTSDQARRACAYFHQTYFDSCK 78
Query: 88 IKVE----KCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKN 143
+ V K +P WSKY+ SS + LHN K K + K G S N
Sbjct: 79 LNVSFAVPKAEESVCGIRP--WSKYSSGSSQFAALHNTNEK---KRKLVKGQVAGTNSTN 133
Query: 144 DPTFSDFLQ-LHGKDVSKLLP---LSNKDGEEKEEENE---DESNNQIAHAD----ISDM 192
D F +F + + + ++ + N D +K EE+ E++N D +SDM
Sbjct: 134 D--FEEFAETMKARSKARFWANDDVQNFDTNQKSEEDRIKAAETSNSDTSEDTMHPLSDM 191
Query: 193 EYLKLKT-KSKDTAP-------SDPSVPPVSK---------APVHKRQY--HTIVVKNLP 233
EYL+ K K + AP SD S+ S+ +K Y + + V+NLP
Sbjct: 192 EYLRSKAAKCDNKAPTLRVKEASDKSISTTSEPEATQVDGITAQNKADYACNRLFVRNLP 251
Query: 234 AGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCNKAL-NKNKSFWKG 284
++DL+ F+ +PL + G ++ F + KAL N + ++G
Sbjct: 252 FSAVEEDLRTIFEAFGKVAEVHIPLDETKRR-KGFGFVSFDTVSDAQKALQNVDGIAFQG 310
Query: 285 KQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNL 344
+ L Y AK AD + +N+ + K+ E + I N
Sbjct: 311 RVL----YVTFAEAKPEITADPLD----KNLSYREKKTLEKQANANQPIG-------WNA 355
Query: 345 SYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFL 404
S+ ++ + L + G +L + + T L+ E+ H
Sbjct: 356 SHIRSDAAVGTLANRMGIARSDVLSQEHGNMAVRLALCETMLVKENKDFFSNH------- 408
Query: 405 GRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDL 464
G L I G +S+ K +A + ++ RS +IL+KNLP+ T +L
Sbjct: 409 GVDLSAIQG--------------ALLSDSKSNAKSDIM--RSTTVILIKNLPHTTEEDEL 452
Query: 465 KALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFA 524
F FG + + L+ P L+EF++ ++A+ AF SLAY K++ VPLYLEWAP VF
Sbjct: 453 CQKFGTFGQILKFLLAPSRTVALIEFVEASEARKAFRSLAYRKYQHVPLYLEWAPLHVF- 511
Query: 525 EAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEP----D 580
T D Q P V + DE+ P
Sbjct: 512 ---------------------------TTKTVDIQTSKPGVVKADLIDEQIGEAPCMELR 544
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
TL +KNL+F + E ++ +F K G + VT+A+ +D + G LSMG+GFV+F
Sbjct: 545 NTLCLKNLSFTTRESTLETYFSKFGKLRKVTIAKSRDKR--GGILSMGFGFVEFADENDA 602
Query: 641 NQALKVLQNSS--LDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + SS +D H + + S + +E RK+S+ ++ SKI++RN+ F+A
Sbjct: 603 QRALSASEQSSPIIDGHSLRVTLSQKKVE-------RKTSDKDGKSTSKIIIRNVAFEAT 655
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
++ L AFG+LK VR+PKK G HRGF FVEF+T+ EAK A +LC+S HLYGR
Sbjct: 656 VHDIRSLCGAFGQLKRVRMPKKF--DGRHRGFAFVEFMTEQEAKDAFNSLCKS-HLYGRH 712
Query: 759 LVLEWAEEADN-VEDIRKRTNR 779
LVLEWAEE +N VE +R + R
Sbjct: 713 LVLEWAEEEENSVESLRVKAKR 734
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 210/746 (28%), Positives = 384/746 (51%), Gaps = 91/746 (12%)
Query: 34 LKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKC 93
LK +FE+ G +TD ++ T +G R+F FIG+ EDQAQ A+ N Y+ SS+++V
Sbjct: 18 LKQQFEKFGGITDCKVMRTPQGNSRKFGFIGFENEDQAQTAITKMNGAYIQSSKLQVSLA 77
Query: 94 SNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQL 153
+GD T + WSKY+ SS++ N ++ + +H +++ KK K+ + + ++
Sbjct: 78 KAIGDQTIERPWSKYSVGSSSFS---NDKKRKVIPTKH--ETQTIKKKKDSSSLDELKKI 132
Query: 154 HGKDVSKLLPLSNKDGEEKE-EENEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVP 212
+ KL +G++K+ + ED+ NNQ +++ + + + S+
Sbjct: 133 ANERKPKL-----DNGKKKKFDSEEDDQNNQ----------HMEEEEEIINEQEHQKSMD 177
Query: 213 PVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIG 264
+ V + I + NLP + D++ F LP+ + G ++
Sbjct: 178 EID---VKDWEEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVL 234
Query: 265 FKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
F ++ KA N+ + F KG+ +++ Y+K AD +N + ++K++K +
Sbjct: 235 FVVPQDAVKACNEMDNKFIKGRIVHVT-YAK---------ADPYSNQQVG--ESKNYKEK 282
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
+ + E A++G F + Y + ++ + E+ G E IL ++ E+ +
Sbjct: 283 KQN----ELKAKAGNQFNWSTLYMRQDTAVSAVAEELGMKKEEILDVNAESMAVRVALAE 338
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVE 443
+++ + T+ + +G V+C + E N + E
Sbjct: 339 NYVI--NQTKKWLEENG-------------------------VNCTVLE------NGMKE 365
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
RS II+VKN+ + ++K+LFE FG L + L+P LVEF N AK AF L
Sbjct: 366 KRSNNIIIVKNIAASAIELEVKSLFEKFGTLKQFLMPKSKALALVEFEVANDAKTAFKRL 425
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
Y++++ +PLYLEWAPE VF E K K +E++ +E+ + +++++ +E++++
Sbjct: 426 VYSRYRGIPLYLEWAPEKVFDEEKVNKKMEEEKLTQEKQSKTIQKEEDTKKKEEDKKKQE 485
Query: 564 EVEENVEEDE-EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPG 622
E + + ++ E E TLY+KN++F + ED IR+ F+KCG + ++T+++ KD K
Sbjct: 486 EDKITTKSNQTELVEEGSKTLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEK 545
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK 682
+ G+GFV++ E A+K LQ +D H ++++ S ++ E K +
Sbjct: 546 ---NSGFGFVEYAKHEDAINAIKTLQGKVIDGHAVQIEISQPKVKDEDH--KERKEIEEH 600
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+ +K+LV+N+PF+ EV ELF+ +G L+ VRLPKK+ G ++GF FVE+ TK EA
Sbjct: 601 KVSNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKV--DGQNKGFAFVEYATKQEAA 658
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEAD 768
AM AL +++H YGR L++E+A++ +
Sbjct: 659 NAMAAL-KNSHFYGRHLIIEYAKDTE 683
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 59/253 (23%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSL- 503
I++KNLP R LK FE FG + +V+ P G + G + F ++QA+ A +
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGNSRKFGFIGFENEDQAQTAITKMN 63
Query: 504 -AYTKFKEVPLYLE-----------WAPEGVFAEA------------KEKSKGKEKEK-- 537
AY + ++ + L W+ V + + K +++ +K+K
Sbjct: 64 GAYIQSSKLQVSLAKAIGDQTIERPWSKYSVGSSSFSNDKKRKVIPTKHETQTIKKKKDS 123
Query: 538 ----------NEEEGEEGEEEKKENTAEEDNQQG-----------VPEVEENVEEDEERE 576
NE + + +KK+ +EED+Q E +++++E + ++
Sbjct: 124 SSLDELKKIANERKPKLDNGKKKKFDSEEDDQNNQHMEEEEEIINEQEHQKSMDEIDVKD 183
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
E + +YI NL FN TED IR+ F + G IA + + K K S G+GFV F
Sbjct: 184 WE-EGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKK-----SKGFGFVLFVV 237
Query: 637 RESLNQALKVLQN 649
+ +A + N
Sbjct: 238 PQDAVKACNEMDN 250
>gi|324509584|gb|ADY44027.1| RNA-binding protein 19 [Ascaris suum]
Length = 567
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/385 (40%), Positives = 221/385 (57%), Gaps = 58/385 (15%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF++ RS +ILVKNLP +L+ +FE FG + R L+PP G++ ++E
Sbjct: 142 LDAFSRPAAKRSATVILVKNLPAGVEVDELQRMFERFGPIKRALMPPEGVSAIIEMDNTV 201
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAK--------------EKSKGKEKEKNEE 540
A+ AF +LAY++F+ PLYLEWAP VFA +K E+ K +E+ E
Sbjct: 202 DARNAFRALAYSRFRAQPLYLEWAPFDVFARSKAEESVEERPGCSNLEEETVKVQEETCE 261
Query: 541 EGEEGEEEKKE------------------NTAEEDNQQGVPEVE-------ENVEEDEER 575
G EEKK E++Q+ P+ E E + E +E+
Sbjct: 262 RGALSREEKKRLRRSKKHREMEQHIKQEPEGGLENHQELAPDGEMVGETKQEEIREQKEK 321
Query: 576 ------------EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
P TT+++KNLNF++T++S+ + F + S V++K+DP P +
Sbjct: 322 LQEENKSEDEEEGPSVGTTVFVKNLNFDTTDESLFKKFSSKFKVRSAIVSKKRDPSDPAK 381
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK- 682
LSMG+GFV+FY+ E +ALK +Q LD H +ELK S+R EA RK +V++
Sbjct: 382 SLSMGFGFVKFYSTEDAQRALKEMQGILLDGHCLELKLSHRE---EAVDESRKRKSVSRL 438
Query: 683 QTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG-LHRGFGFVEFITKN 739
Q G +KI+VRNIPFQA + E+++LF FGEL+ R+PKKM S HRGFGFV+F+T+
Sbjct: 439 QQGDCTKIMVRNIPFQATRKELKQLFATFGELRAFRMPKKMGSSAEGHRGFGFVDFLTRA 498
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWA 764
+A+RA AL STHLYGRRLVLEWA
Sbjct: 499 DARRAFDALVHSTHLYGRRLVLEWA 523
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 25/194 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKETDKTKGFALVTFLMPEHATQ 393
+FV+NL++ T++ L K F + I+ P D + GF V F E A +
Sbjct: 341 VFVKNLNFDTTDESLFKKFSSKFKVRSAIVSKKRDPSDPAKSLSMGFGFVKFYSTEDAQR 400
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + + G + G L L K E VD RK + +++ + +I +V+
Sbjct: 401 ALKEMQGILLDGHCLEL---KLSHREEAVD-------ESRKRKSVSRLQQGDCTKI-MVR 449
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT-------GLVEFLQKNQAKAAFNSLAY 505
N+P++ +LK LF FG+L +P G + G V+FL + A+ AF++L +
Sbjct: 450 NIPFQATRKELKQLFATFGELRAFRMPKKMGSSAEGHRGFGFVDFLTRADARRAFDALVH 509
Query: 506 -TKFKEVPLYLEWA 518
T L LEWA
Sbjct: 510 STHLYGRRLVLEWA 523
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 368 LPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
+ I+K+T KGFA+VT++ PE+A A+ LDGT+F GRMLH++ G K
Sbjct: 1 MIINKKTGMCKGFAIVTYVFPENAVAAFSALDGTIFKGRMLHVLAGDEK 49
>gi|328773827|gb|EGF83864.1| hypothetical protein BATDEDRAFT_8977, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 873
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/361 (41%), Positives = 214/361 (59%), Gaps = 30/361 (8%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
+DA + + RS +ILVKN+PY T DL F FG LGR+++PP LVEF ++N
Sbjct: 509 IDAL-KSTQTRSNTVILVKNIPYTTEEEDLIETFGKFGTLGRIILPPAKTIALVEFTERN 567
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AKAAF LAY+KFK +PLYL+WA +G+F + + K + + +E + N A
Sbjct: 568 EAKAAFRKLAYSKFKNIPLYLQWASQGIFTQEFDAEKEAARREARSAAKEISTGYQFNAA 627
Query: 555 EEDNQQGVPEVEENVE------EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
D+ P V VE ED+ P P ++YIKNLNF +TE+ +R+ F +
Sbjct: 628 GFDSATQNPNVSSKVEHRLEDLEDDSSAP-PVASIYIKNLNFQTTEEGLRQAFGGLSGLR 686
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS------ 662
SV + K DPK+ G+ S+G+GF+ F + E + LK +QN LD H ++LK S
Sbjct: 687 SVNIKMKDDPKTGGK-QSLGFGFLGFASTEDATKCLKAMQNFKLDNHVLQLKYSKPVAPQ 745
Query: 663 NRNLE--SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
R LE E T+K G+K++VRN+PF+A + +++ELF +F ++K VR+P K
Sbjct: 746 KRTLEMDDEDDTIK----------GTKLVVRNVPFEASKKDIKELFSSFAQVKSVRIPTK 795
Query: 721 MVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRY 780
G HRGF FV+F+TK EAK A L +THLYGR LVLEWA++ ++VE +R +T R
Sbjct: 796 Y--DGQHRGFAFVDFLTKQEAKTAYDTLG-ATHLYGRHLVLEWAQDDESVEAVRSKTIRN 852
Query: 781 F 781
F
Sbjct: 853 F 853
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 83/124 (66%), Gaps = 2/124 (1%)
Query: 303 AADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGP 362
A D ++ S + + + K ED + AE IA++GRI VRNL+Y + +D+ +LF+ +GP
Sbjct: 305 AESDEDDNSADRSRIINSKPIEDELPPAELIADTGRIMVRNLTYLCSPEDIEELFKPFGP 364
Query: 363 LAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGK--PKENEG 420
++EV +PID+ET K+KG+A + +LMPE+A AY LD T+F GR++ ++P K PK +
Sbjct: 365 ISEVHIPIDRETKKSKGYAFIMYLMPENAVNAYTTLDNTIFQGRIMQIVPAKERPKAADE 424
Query: 421 NVDG 424
+ G
Sbjct: 425 TLTG 428
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 64/94 (68%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
Y IT E+LK F +KG VTDV+L T +G FR F F+G+ ++QA++AL YFN +Y+ +S
Sbjct: 10 YNITPERLKNHFSKKGQVTDVKLATTKDGVFRCFGFVGFKTQEQAESALAYFNKSYIDTS 69
Query: 87 RIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHN 120
RI+VE +GD + + WSK+ P +SA ++ N
Sbjct: 70 RIEVEVAKAIGDASLSRGWSKHTPGTSANTQMIN 103
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 24/198 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKG-----FALVTFLMPEHATQ 393
I+++NL++ TE+ L + F L V + + K+ KT G F + F E AT+
Sbjct: 661 IYIKNLNFQTTEEGLRQAFGGLSGLRSVNIKM-KDDPKTGGKQSLGFGFLGFASTEDATK 719
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ + +L L KP +R L+ ++ + +++ V+
Sbjct: 720 CLKAMQNFKLDNHVLQLKYSKP------------VAPQKRTLEMDDEDDTIKGTKLV-VR 766
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPP-----YGITGLVEFLQKNQAKAAFNSLAYTKF 508
N+P+ D+K LF F + V +P + V+FL K +AK A+++L T
Sbjct: 767 NVPFEASKKDIKELFSSFAQVKSVRIPTKYDGQHRGFAFVDFLTKQEAKTAYDTLGATHL 826
Query: 509 KEVPLYLEWAPEGVFAEA 526
L LEWA + EA
Sbjct: 827 YGRHLVLEWAQDDESVEA 844
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L +KNL +N T + ++ HF K G + V +A KD G F +GFV F T+E
Sbjct: 3 LIVKNLPYNITPERLKNHFSKKGQVTDVKLATTKD----GVFRC--FGFVGFKTQEQAES 56
Query: 643 ALKVLQNSSLDEHQIELK 660
AL S +D +IE++
Sbjct: 57 ALAYFNKSYIDTSRIEVE 74
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N+ YT E+DL + F K+G L +ILP K ALV F A A++ L
Sbjct: 523 ILVKNIPYTTEEEDLIETFGKFGTLGRIILP------PAKTIALVEFTERNEAKAAFRKL 576
Query: 399 DGTVFLGRMLHL 410
+ F L+L
Sbjct: 577 AYSKFKNIPLYL 588
>gi|340382975|ref|XP_003389993.1| PREDICTED: probable RNA-binding protein 19-like [Amphimedon
queenslandica]
Length = 866
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 210/358 (58%), Gaps = 50/358 (13%)
Query: 434 KLDAF----NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVE 489
KL++F N++ RSK +ILVKNLP+ T +L LF PFG L RV++PP GI+ LVE
Sbjct: 526 KLNSFDTEENELTRKRSKNVILVKNLPFGTSTKELTELFAPFGSLSRVILPPAGISALVE 585
Query: 490 FLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEK 549
+ + AK AF L+Y +FK +PLYLEWAP GV + GE + K
Sbjct: 586 YSSSSNAKVAFKKLSYCEFKHLPLYLEWAPFGVMS-----------------GEPSQPVK 628
Query: 550 KENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK-KCGPIA 608
AEE +++++KNLNF++T+D + HFK + G +
Sbjct: 629 DTGKAEE-----------------------SSSIFVKNLNFSTTDDGLSSHFKERVGGVV 665
Query: 609 SVTVARKKDPKS-PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR--- 664
S V++K PK+ G LSMG+GFV F ++ + +ALK LQ+S LD H++EL+ S+
Sbjct: 666 SAKVSKKYTPKAGGGASLSMGFGFVTFSSKTAALKALKELQSSLLDGHKLELQLSHSAPS 725
Query: 665 -NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG 723
+ + AT+ K S + K +KIL+RN+PF+A + E+ +L FG++K +RLPKK
Sbjct: 726 VSDAASATSHKVTKSLMPKGPKNKILIRNVPFEASRKELSQLLSTFGKIKNLRLPKKQNE 785
Query: 724 SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
HRGF FVE+ T +A+ A ++L STHLYGRRLVLEWAE D V+DIR +T F
Sbjct: 786 PNSHRGFCFVEYSTTEDARSAFESLADSTHLYGRRLVLEWAEGDDTVDDIRAKTALRF 843
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 221/439 (50%), Gaps = 59/439 (13%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
K T ++LK F + G +TDV+L YT G FRRFAF+GY AQ ++ YFNNTY+ +S+
Sbjct: 13 KATSKELKEHFSKCGQITDVKLMYTRSGTFRRFAFVGYSDSFSAQESIKYFNNTYIGTSK 72
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSA---YQKLHNIAPKQDLKPEHTKDSKPGKKSK-- 142
I+V + + GD++ P+ WS+Y+ SS Y+K ++ E K+ + G+KSK
Sbjct: 73 IQVIEAKSFGDSSIPRPWSRYSTGSSTNQIYEKKRKSTKDSSIEEEGQKEKEEGRKSKRL 132
Query: 143 ----------------------NDPTFSDFLQLHGKD-VSKLLPLSNKDGEEKE------ 173
++P F +FL + + S+ K G E +
Sbjct: 133 KLNEDFHQSQLASLINELEELKSEPGFMEFLVANERGRSSETWSNEGKGGSENDKKKKKR 192
Query: 174 ---EENEDESNNQI-AHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVV 229
E +EDE+NN + +SD+E+LK +K + + + HTI +
Sbjct: 193 KEVEIDEDETNNLARVPSSVSDLEFLK--SKVVEHVTDETREEEREEESEPPPPLHTIRM 250
Query: 230 KNLPAGVKKKDLKAYFKPLPLASVRTT------FLGMAYIGFKDEKNCNKALNKNKSFWK 283
+ LP +K + +F P+ L+++R G+A++ E + +A+ +NK
Sbjct: 251 RGLPYDASEKHVHKFFSPIQLSNIRLLKDDRERCSGLAFVDVMSETDLKEAMKRNKGRMG 310
Query: 284 GKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRN 343
+ + + D + K+K +++ + E IA+SGRIF+RN
Sbjct: 311 RRYIEL-------------VVDTGSKEKTVKEKSKRPWEEKEDEETVESIADSGRIFIRN 357
Query: 344 LSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVF 403
L YT TE++LT+LFE+YG L+E+ L +DK T + G VTF+ PEHA +A+ LDG VF
Sbjct: 358 LPYTTTEEELTELFEEYGQLSEINLLVDKSTGSSIGLGYVTFMFPEHAVKAFSELDGQVF 417
Query: 404 LGRMLHLIPGKPKENEGNV 422
GR+LHL+P KP E V
Sbjct: 418 QGRLLHLLPSKPPNKEVGV 436
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 143/357 (40%), Gaps = 48/357 (13%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKALN 276
KR + I+VKNLP G K+L F P L+ V G+ A + + N A
Sbjct: 538 TRKRSKNVILVKNLPFGTSTKELTELFAPFGSLSRVILPPAGISALVEYSSSSNAKVAF- 596
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
K S+ + K L +Y A + + + + + KA+ ES
Sbjct: 597 KKLSYCEFKHLPLYL----EWAPFGVMSGEPSQPVKDTGKAE----------------ES 636
Query: 337 GRIFVRNLSYTVTEDDLTKLF-EKYGPLAEVILPIDKETDK-------TKGFALVTFLMP 388
IFV+NL+++ T+D L+ F E+ G + + K T K + GF VTF
Sbjct: 637 SSIFVKNLNFSTTDDGLSSHFKERVGGVVSAKVS-KKYTPKAGGGASLSMGFGFVTFSSK 695
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
A +A + L ++ G L L + V S ++ K
Sbjct: 696 TAALKALKELQSSLLDGHKLEL-------QLSHSAPSVSDAASATSHKVTKSLMPKGPKN 748
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-----PYGITG--LVEFLQKNQAKAAFN 501
IL++N+P+ +L L FG + + +P P G VE+ A++AF
Sbjct: 749 KILIRNVPFEASRKELSQLLSTFGKIKNLRLPKKQNEPNSHRGFCFVEYSTTEDARSAFE 808
Query: 502 SLA-YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEED 557
SLA T L LEWA EG ++K + EEG E ++ K+ ++ D
Sbjct: 809 SLADSTHLYGRRLVLEWA-EGDDTVDDIRAKTALRFYKGEEGPEKKKSKRITISDND 864
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 19/240 (7%)
Query: 545 GEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC 604
GE + T E GV + EE+E + +KNL F ++ + F
Sbjct: 508 GETQLVNETREFLESHGVKLNSFDTEENELTRKRSKNVILVKNLPFGTSTKELTELFAPF 567
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G ++ V + P +S V++ + + A K L + L+ +
Sbjct: 568 GSLSRVIL--------PPAGIS---ALVEYSSSSNAKVAFKKLSYCEFKHLPLYLEWAPF 616
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKA-FGELKFVRLPKKMV- 722
+ S + K + A+++ S I V+N+ F + FK G + ++ KK
Sbjct: 617 GVMSGEPSQPVKDTGKAEESSS-IFVKNLNFSTTDDGLSSHFKERVGGVVSAKVSKKYTP 675
Query: 723 ----GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTN 778
G+ L GFGFV F +K A +A+K L QS+ L G +L L+ + A +V D T+
Sbjct: 676 KAGGGASLSMGFGFVTFSSKTAALKALKEL-QSSLLDGHKLELQLSHSAPSVSDAASATS 734
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 215/772 (27%), Positives = 379/772 (49%), Gaps = 131/772 (16%)
Query: 34 LKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKC 93
LK +FE+ G +TD ++ T +G R+F FIG+ EDQAQ A+ N Y+ SS+++V
Sbjct: 18 LKQQFEKFGGITDCKVMRTPQGNSRKFGFIGFENEDQAQTAITKMNGAYIQSSKLQVSLA 77
Query: 94 SNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQL 153
+GD T + WSKY+ SS++ N ++ + +H +++ KK K+ + + ++
Sbjct: 78 KAIGDQTIERPWSKYSVGSSSFS---NDKKRKVIPTKH--ETQTIKKKKDSSSLDELKKM 132
Query: 154 HGKDVSKLLPLSNKDGEEKE-EENEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVP 212
+ KL +G++K+ + ED+ NNQ H + ++ + KS D
Sbjct: 133 ANERRPKL-----DNGKKKKFDSEEDDQNNQ--HMEEEEIINEQEHQKSMD--------- 176
Query: 213 PVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIG 264
+ V + I + NLP + D++ F LP+ + G ++
Sbjct: 177 ---EIDVKDWEEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVL 233
Query: 265 FKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
F ++ KA N+ + F KG+ +++ Y+K AD +N + ++K++K +
Sbjct: 234 FVVPQDAVKACNEMDNKFIKGRIVHVT-YAK---------ADPYSNQQVG--ESKNYKEK 281
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
+ + E A++G F + Y + ++ + E+ G E IL ++ E+ +
Sbjct: 282 KQN----ELKAKAGNQFNWSTLYMRQDTAVSAVAEELGMKKEEILDVNAESMAVRVALAE 337
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVE 443
+++ + T+ + +G V+C + E N + E
Sbjct: 338 NYVI--NQTKKWLEENG-------------------------VNCTVLE------NGMKE 364
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
RS II+VKN+ + ++K+LFE FG L + L+P LVEF N AK AF L
Sbjct: 365 KRSNNIIIVKNIAASAIDLEVKSLFEKFGTLKQFLMPKSKALALVEFEVANDAKTAFKRL 424
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG------------------ 545
Y++++ +PLYLEWAPE VF E K K +E++ +E+ +
Sbjct: 425 VYSRYRGIPLYLEWAPEKVFDEEKVNKKMEEEKLTQEKQSKTIQKEESQKKKEEKTKQEE 484
Query: 546 ---------EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDS 596
++++++ T + NQ + E E TLY+KN++F + ED
Sbjct: 485 DKKKQEEDKKKQEEDKTTTKSNQTELVE-------------EGSKTLYVKNISFKTKEDV 531
Query: 597 IRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQ 656
IR+ F+KCG + +VT+++ KD K + G+GFV++ E A+K LQ +D H
Sbjct: 532 IRKVFEKCGRVLAVTLSKTKDKKVEK---NSGFGFVEYAKHEDAINAIKTLQGKVIDGHA 588
Query: 657 IELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVR 716
++++ S ++ E K + + +K+LV+N+PF+ EV ELF+ +G L+ VR
Sbjct: 589 VQIEISQPKVKDEDH--KERKEIEEHKVSNKLLVKNVPFETNIKEVRELFRTYGTLRGVR 646
Query: 717 LPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
LPKK+ G ++GF FVE+ TK EA AM AL +++H YGR L++E+A++ +
Sbjct: 647 LPKKV--DGQNKGFAFVEYATKQEAANAMAAL-KNSHFYGRHLIIEYAKDTE 695
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 58/252 (23%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSL- 503
I++KNLP R LK FE FG + +V+ P G + G + F ++QA+ A +
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGNSRKFGFIGFENEDQAQTAITKMN 63
Query: 504 -AYTKFKEVPLYLE-----------WAPEGVFAEAKEKSKGK------------------ 533
AY + ++ + L W+ V + + K +
Sbjct: 64 GAYIQSSKLQVSLAKAIGDQTIERPWSKYSVGSSSFSNDKKRKVIPTKHETQTIKKKKDS 123
Query: 534 ------EKEKNEEEGEEGEEEKKENTAEEDNQQG----------VPEVEENVEEDEEREP 577
+K NE + +KK+ +EED+Q E +++++E + ++
Sbjct: 124 SSLDELKKMANERRPKLDNGKKKKFDSEEDDQNNQHMEEEEIINEQEHQKSMDEIDVKDW 183
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
E + +YI NL FN TED IR+ F + G IA + + K K S G+GFV F
Sbjct: 184 E-EGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKK-----SKGFGFVLFVVP 237
Query: 638 ESLNQALKVLQN 649
+ +A + N
Sbjct: 238 QDAVKACNEMDN 249
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 209/746 (28%), Positives = 383/746 (51%), Gaps = 91/746 (12%)
Query: 34 LKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKC 93
LK +FE+ G +TD ++ T +G R+F FIG+ EDQAQ A+ N Y+ SS+++V
Sbjct: 18 LKQQFEKFGGITDCKVMRTPQGNSRKFGFIGFENEDQAQTAITKMNGAYIQSSKLQVSLA 77
Query: 94 SNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQL 153
+GD T + WSKY+ SS++ N ++ + +H +++ KK K+ + + ++
Sbjct: 78 KAIGDQTIERPWSKYSVGSSSFS---NDKKRKVIPTKH--ETQTIKKKKDSSSLDELKKI 132
Query: 154 HGKDVSKLLPLSNKDGEEKE-EENEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVP 212
+ KL +G++K+ + ED+ NNQ +++ + + + S+
Sbjct: 133 ANERKPKL-----DNGKKKKFDSEEDDQNNQ----------HMEEEEEIINEQEHQKSMD 177
Query: 213 PVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIG 264
+ V + I + NLP + D++ F LP+ + G ++
Sbjct: 178 EID---VKDWEEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVL 234
Query: 265 FKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
F ++ KA N+ + F KG+ +++ Y+K AD +N + ++K++K +
Sbjct: 235 FVVPQDAVKACNEMDNKFIKGRIVHVT-YAK---------ADPYSNQQVG--ESKNYKEK 282
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
+ + E A++G F + Y + ++ + E+ G E IL ++ E+ +
Sbjct: 283 KQN----ELKAKAGNQFNWSTLYMRQDTAVSAVAEELGMKKEEILDVNAESMAVRVALAE 338
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVE 443
+++ + T+ + +G V+C + E N + E
Sbjct: 339 NYVI--NQTKKWLEENG-------------------------VNCTVLE------NGMKE 365
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
S II+VKN+ + ++K+LFE FG L + L+P LVEF N AK AF L
Sbjct: 366 KCSNNIIIVKNIAASAIELEVKSLFEKFGTLKQFLMPKSKALALVEFEVANDAKTAFKRL 425
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
Y++++ +PLYLEWAPE VF E K K +E++ +E+ + +++++ +E++++
Sbjct: 426 VYSRYRGIPLYLEWAPEKVFDEEKVNKKMEEEKLTQEKQSKTIQKEEDTKKKEEDKKKQE 485
Query: 564 EVEENVEEDE-EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPG 622
E + + ++ E E TLY+KN++F + ED IR+ F+KCG + ++T+++ KD K
Sbjct: 486 EDKITTKSNQTELVEEGSKTLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEK 545
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK 682
+ G+GFV++ E A+K LQ +D H ++++ S ++ E K +
Sbjct: 546 ---NSGFGFVEYAKHEDAINAIKTLQGKVIDGHAVQIEISQPKVKDEDH--KERKEIEEH 600
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+ +K+LV+N+PF+ EV ELF+ +G L+ VRLPKK+ G ++GF FVE+ TK EA
Sbjct: 601 KVSNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKV--DGQNKGFAFVEYATKQEAA 658
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEAD 768
AM AL +++H YGR L++E+A++ +
Sbjct: 659 NAMAAL-KNSHFYGRHLIIEYAKDTE 683
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 59/253 (23%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSL- 503
I++KNLP R LK FE FG + +V+ P G + G + F ++QA+ A +
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGNSRKFGFIGFENEDQAQTAITKMN 63
Query: 504 -AYTKFKEVPLYLE-----------WAPEGVFAEA------------KEKSKGKEKEK-- 537
AY + ++ + L W+ V + + K +++ +K+K
Sbjct: 64 GAYIQSSKLQVSLAKAIGDQTIERPWSKYSVGSSSFSNDKKRKVIPTKHETQTIKKKKDS 123
Query: 538 ----------NEEEGEEGEEEKKENTAEEDNQQG-----------VPEVEENVEEDEERE 576
NE + + +KK+ +EED+Q E +++++E + ++
Sbjct: 124 SSLDELKKIANERKPKLDNGKKKKFDSEEDDQNNQHMEEEEEIINEQEHQKSMDEIDVKD 183
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
E + +YI NL FN TED IR+ F + G IA + + K K S G+GFV F
Sbjct: 184 WE-EGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKK-----SKGFGFVLFVV 237
Query: 637 RESLNQALKVLQN 649
+ +A + N
Sbjct: 238 PQDAVKACNEMDN 250
>gi|50546647|ref|XP_500793.1| YALI0B12276p [Yarrowia lipolytica]
gi|74689812|sp|Q6CEW9.1|MRD1_YARLI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49646659|emb|CAG83044.1| YALI0B12276p [Yarrowia lipolytica CLIB122]
Length = 828
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 177/514 (34%), Positives = 262/514 (50%), Gaps = 97/514 (18%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I ++GR+F+RNL YT E+D +LF +YG L EV LPI+ +T + KGFA V F PE+A
Sbjct: 297 IRKTGRLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAI 356
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCIS-------ERKLDAFNQ----- 440
AY+ DG +F GR+LH++PGKPK++ +D + +RK +A Q
Sbjct: 357 AAYEAQDGKIFQGRLLHILPGKPKKDYNRLDEHDLKNLPLKKQQELKRKAEAAKQQFSWN 416
Query: 441 --------VVEARSKRIILVKN---------------LPYRTLPTDLKALFE-------- 469
V+E+ +K + + K+ L T+ D+K+ FE
Sbjct: 417 SLYMNQDAVMESVAKSMGIKKSELIDPDSSDAAVKQALAEATVIGDVKSYFEKMGVDLAS 476
Query: 470 ----------------PFG--------------DLGRVLVPPYGITGLVEFLQKNQAKAA 499
PFG DL +V++PP G +V F A+AA
Sbjct: 477 FDNKDRDDRVILVKNFPFGTTQPEIAEMFSEYGDLYKVMMPPAGTIAIVIFKHIPDARAA 536
Query: 500 FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQ 559
F LA+ +FK LYLE P+ + K E +E E K++ +++
Sbjct: 537 FAKLAFRRFKTSILYLEKGPKNLLPNEK------------MESDEVEHVKQDKIVTIEDK 584
Query: 560 QGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
+V + D ER T++++KNLNF +T + FK V K D K
Sbjct: 585 LSASDVMDTGSND-ERPATASTSVFVKNLNFKTTSRVLTDAFKALDGFLVAQVKMKPDSK 643
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN 679
+ G+FLSMG+GFV+F ++E+ A K + LD H+++LK SNR + E T K
Sbjct: 644 NKGKFLSMGFGFVEFSSKEAAEIAQKAMDGHVLDGHKLQLKISNRGQDEETTETK----- 698
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
K SKIL++N+PF+A + +V++LF AFG LK VR+PKK + RGF F E+++
Sbjct: 699 --KAIDSKILIKNLPFEATKKDVQKLFGAFGSLKTVRVPKKF--NSESRGFAFAEYVSAK 754
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWAE-EADNVED 772
EA+ AM AL Q THL GRRLVL++A+ +A N E+
Sbjct: 755 EAEHAMSAL-QGTHLLGRRLVLQYAQADASNAEE 787
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TDV++ +GK RRF F+G+ ++ A+AA+ YF+ +++ S++I V D P
Sbjct: 38 ITDVKVVRARDGKTRRFGFVGFRSDETAEAAVKYFDTSFINSTKISVAVAMTFTDPNVPL 97
Query: 104 S 104
S
Sbjct: 98 S 98
>gi|297738037|emb|CBI27238.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 234/809 (28%), Positives = 382/809 (47%), Gaps = 153/809 (18%)
Query: 52 TTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYAPD 111
T EGK R+FAFIG+ E +A+ AL +FNN+Y+ + RI E +GD P+ WS+Y+
Sbjct: 3 TKEGKSRQFAFIGFRTEQEAEEALKFFNNSYLDTCRITCEIARKVGDPDIPRPWSRYS-- 60
Query: 112 SSAYQKLHNIAPKQDLKPEHTKDSK----PGKKSK-----NDPTFSDFLQL--------- 153
K + + + + K TK+S G+KSK +DP +FLQ+
Sbjct: 61 ----LKKEDKSTEVEKKDRGTKNSSHVGSKGEKSKKGSENDDPQLQEFLQVMQPRVKSKM 116
Query: 154 --------------------------HGKDVSKLLPLSNKDGEEKEEENEDESN----NQ 183
G+D + + + +E+E+E D N
Sbjct: 117 WANDTLGVPPLDHNGKNSDKQTQSMREGRDEAVQMQADLDESDEREDELSDSQMDTKPNN 176
Query: 184 IAHAD-ISDMEYLK-LKTKSKDTAPSDPSVP-------PVSKAPVHKRQYHT--IVVKNL 232
+AH + ISDM+Y K K+K D S+ S P+ + K T + V+NL
Sbjct: 177 LAHDEVISDMDYFKSRKSKVDDEDHSEESDGERMDSGNPLLSSKDGKDVLETGRLFVRNL 236
Query: 233 PAGVKKKDLKAYFKPLPLASVRTTFL----------GMAYIGFKDEKNCNKALNK-NKSF 281
P + +L+ F +V L G+AY+ F ++ +AL + + S
Sbjct: 237 PYTATEDELEELFSKF--GNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEELDNSI 294
Query: 282 WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFV 341
++G+ L++ + K S + N +AS + K + +E A SG
Sbjct: 295 FQGRLLHVMPARE---KKPSEKQEANASASQSSKTLKQKREEEKKASEA-----SGDTRA 346
Query: 342 RNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGT 401
N + T+ + + KYG +++ L + D AL + +A ++
Sbjct: 347 WNSLFMRTDTVVENIARKYG-ISKSDLLDSQADDLAVRIALGETQVIAETKKAL--INAG 403
Query: 402 VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLP 461
V + + + GK EG RS I+LVKNLPY +
Sbjct: 404 VNIASLEEFVAGK---TEG----------------------AKRSNHILLVKNLPYGSSE 438
Query: 462 TDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEG 521
+L +F +G L ++++PP LV FL+ +A+AAF LAY ++K+ PLYLEWAP
Sbjct: 439 GELAKMFGKYGSLDKIILPPTKTLALVVFLEPAEARAAFRGLAYKRYKDAPLYLEWAPGN 498
Query: 522 VFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPD- 580
+ ++ E + + E D ++ + +E+ VE + + +PD
Sbjct: 499 ILSQNAPY--------------ENDASRSVIVGERDVKRML--LEQQVEGISDVDIDPDR 542
Query: 581 ---TTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKKDPKSPGQFLSMGYGFVQF 634
+L++KNLNF ++ +S+R+HF K G I SV V K+ G+ +SMG+GF++F
Sbjct: 543 VESRSLFVKNLNFKTSGESLRKHFSEHMKEGKIRSVRV---KEHLKNGKNVSMGFGFIEF 599
Query: 635 YTRESLNQALKVLQNSSLDEHQ--IELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRN 692
+ E+ LQ + LD H ++L R+ ++ + K KSS +K++VRN
Sbjct: 600 DSVETAVNVCSNLQGTVLDGHALILQLCRAKKDEQVLKKVDKDKSS-------TKLIVRN 652
Query: 693 IPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
+ F+A + ++ +LF FG++K +RLP K G HRGF FVEF+TK EA+ A++AL ST
Sbjct: 653 VAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEFVTKQEAQNALQALS-ST 708
Query: 753 HLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
HLYGR LV+E A+E +++E++R RT F
Sbjct: 709 HLYGRHLVMERAKEGESLEELRARTAAQF 737
>gi|341892788|gb|EGT48723.1| CBN-RBD-1 protein [Caenorhabditis brenneri]
Length = 876
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/384 (40%), Positives = 225/384 (58%), Gaps = 41/384 (10%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYG-ITGLVEFLQ 492
KLDAF++ E RS +IL KNLP +L+ +FE FGD +VL+P G ++ LV
Sbjct: 469 KLDAFSKPAEKRSDTVILAKNLPAGVETEELQRMFEKFGDCQKVLMPSEGGVSALVIMGN 528
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
AK AF +LAY++F+ PLYLEWAP V A+ E ++ EE ++ ++ K+E
Sbjct: 529 PVDAKKAFRALAYSRFRSQPLYLEWAPFDVLGAAEPPV---ETDQKSEEPQKPKKSKREM 585
Query: 553 TAEE------DNQQGV--------------------PEVEEN-----VEEDEEREPEPDT 581
T EE + QQG+ PE E ++ E+E E +
Sbjct: 586 TYEEKKKERKNRQQGITDEDEEREKEENEGGTEDKKPETSETKPKKASKKLSEKEIESGS 645
Query: 582 TLYIKNLNFNSTEDSIRRHFKK--CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
+++KNL F++T+D + F+K + S +++K +P P + LSMG+GFVQFYT
Sbjct: 646 AIFVKNLAFDTTDDGLDSLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFYTSLD 705
Query: 640 LNQALKVLQNSSLDEHQIELKRSNR-NLESEATTVKRKSSNVAKQT-GSKILVRNIPFQA 697
QALK +Q LD H +ELK S+R N++ A +KRK Q +K+LVRN+PF+A
Sbjct: 706 AKQALKEMQGELLDGHSLELKISHRENVDKGA--LKRKEIRQKDQGECTKLLVRNLPFEA 763
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
EVE LF+ FG +K +R+P+K HRGFGFV+FI+ +EA+RA AL STHLYGR
Sbjct: 764 SIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISADEARRAFDALVHSTHLYGR 823
Query: 758 RLVLEWAEEADNVEDIRKRTNRYF 781
RLVLEWA+E + VE++R++T F
Sbjct: 824 RLVLEWAKEDETVEELREKTAEKF 847
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 212/402 (52%), Gaps = 57/402 (14%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
T++QL+ FE+ G ++D LKYT EGKFR FAF+G+ E A A+ N T+ S R+
Sbjct: 14 CTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSAANAISKSNQTFFNSKRL 73
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQ-DLKP--EHTKDSKPGKKSKNDP 145
VE+C GD KP++WSKYA DSSAY++ H P Q D KP + D KK KND
Sbjct: 74 TVEECRPFGDANKPRAWSKYAKDSSAYKRAH---PDQVDEKPGKSGSSDEPTAKKQKNDE 130
Query: 146 TFSDFLQLHGKDVSKLLPLS-NKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDT 204
FL+ G V K + LS +K E K+ AD+ ME ++
Sbjct: 131 KLDQFLEAKGVAVEKEVRLSKDKSAEAKK-----------LMADL--MEGIE-------- 169
Query: 205 APSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASV---RTTFLGMA 261
D S+ +++ LP+ K K++K + P+ + ++ R + A
Sbjct: 170 --GDTSL--------------SLIFSGLPSSAKGKNIKEWLNPIRVKAMKISRNEDVAAA 213
Query: 262 YIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWK 321
++ F + +AL K+ F G ++ I K + + + A + + A +++ +
Sbjct: 214 FVTFNRPPDVRRALQKDGQFLGGFKIGIEKI---ETPEPTVEAVEEHGAELQS-----RE 265
Query: 322 SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFA 381
+E++V+ E I E+GR+F+RNL Y EDDL LF+KYG ++EV + IDK+T KGFA
Sbjct: 266 KEEETVR--EKILETGRLFIRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGNCKGFA 323
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVD 423
+V F+ PE A AY DG VF GRM+H+I G K ++ VD
Sbjct: 324 IVEFVFPEAAVAAYSACDGYVFKGRMMHIIAGDEKRDKPAVD 365
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 27/216 (12%)
Query: 321 KSQEDSVQFAEDIAESGR-IFVRNLSYTVTEDDLTKLFEK-YGPL------AEVILPIDK 372
K ++ S + +E ESG IFV+NL++ T+D L LF K YG L ++ + P +
Sbjct: 628 KPKKASKKLSEKEIESGSAIFVKNLAFDTTDDGLDSLFRKRYGDLVKSAQISKKLNPAEP 687
Query: 373 ETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISE 432
+ GF V F A QA + + G + G L L K E NVD +
Sbjct: 688 TKPLSMGFGFVQFYTSLDAKQALKEMQGELLDGHSLEL---KISHRE-NVD---KGALKR 740
Query: 433 RKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGIT 485
+++ +Q + +LV+NLP+ +++ LFE FG + + +P +
Sbjct: 741 KEIRQKDQGECTK----LLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGF 796
Query: 486 GLVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWAPE 520
G V+F+ ++A+ AF++L + T L LEWA E
Sbjct: 797 GFVDFISADEARRAFDALVHSTHLYGRRLVLEWAKE 832
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 149/354 (42%), Gaps = 71/354 (20%)
Query: 227 IVVKNLPAGVKKKDLKAYFK---PLPLASVRTT----FLGMAYIGFKDEKNCNKALNK-N 278
++VKNLP+ ++ L+ +F+ + AS++ T F G A++GF DE + A++K N
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSAANAISKSN 64
Query: 279 KSFWKGKQLNI---------------YKYSKDNSA-------------KYSGAADD---- 306
++F+ K+L + KY+KD+SA SG++D+
Sbjct: 65 QTFFNSKRLTVEECRPFGDANKPRAWSKYAKDSSAYKRAHPDQVDEKPGKSGSSDEPTAK 124
Query: 307 --NNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTED-DLTKLF------ 357
N+ ++ + E V+ ++D + + + +L + D L+ +F
Sbjct: 125 KQKNDEKLDQFLEAKGVAVEKEVRLSKDKSAEAKKLMADLMEGIEGDTSLSLIFSGLPSS 184
Query: 358 -------EKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRM--- 407
E P+ + I + D F VTF P +A Q DG FLG
Sbjct: 185 AKGKNIKEWLNPIRVKAMKISRNEDVAAAF--VTFNRPPDVRRALQK-DGQ-FLGGFKIG 240
Query: 408 LHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKAL 467
+ I E + E++ + + + + + ++NLPY T DL+ L
Sbjct: 241 IEKIETPEPTVEAVEEHGAELQSREKEEETVREKILETGR--LFIRNLPYATKEDDLQFL 298
Query: 468 FEPFGDLGRVLVPPYGITG------LVEFLQKNQAKAAFNSLAYTKFKEVPLYL 515
F+ +G++ V V TG +VEF+ A AA+++ FK +++
Sbjct: 299 FKKYGEVSEVQVVIDKKTGNCKGFAIVEFVFPEAAVAAYSACDGYVFKGRMMHI 352
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+ V+NL T TE L K FEKYG +++ L KE K +GFA V FL A A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEG-KFRGFAFVGFLDEGSAANAISK 62
Query: 398 LDGTVFLGRMLHLIPGKP 415
+ T F + L + +P
Sbjct: 63 SNQTFFNSKRLTVEECRP 80
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 21/131 (16%)
Query: 651 SLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFG 710
+++EH EL+ + E E TV+ K +TG ++ +RN+P+ K+ +++ LFK +G
Sbjct: 253 AVEEHGAELQ----SREKEEETVREK----ILETG-RLFIRNLPYATKEDDLQFLFKKYG 303
Query: 711 ELKFVR--LPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE-- 766
E+ V+ + KK +G +GF VEF+ EA A + C GR + + +E
Sbjct: 304 EVSEVQVVIDKK---TGNCKGFAIVEFVFP-EAAVAAYSACDGYVFKGRMMHIIAGDEKR 359
Query: 767 ----ADNVEDI 773
D+VE I
Sbjct: 360 DKPAVDDVEAI 370
>gi|326437182|gb|EGD82752.1| hypothetical protein PTSG_03403 [Salpingoeca sp. ATCC 50818]
Length = 1027
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/342 (40%), Positives = 206/342 (60%), Gaps = 15/342 (4%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF+ V RSK +ILVKNLP+ + DL+ +FE G + + + PP LV F++ +
Sbjct: 674 LDAFDTRVTGRSKTVILVKNLPFNSTEADLRPMFEKHGAVDKFVFPPSRTMALVSFIEPS 733
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+AAF LAY K+K LYLEWAPE VFA +E+ + +++ A
Sbjct: 734 EARAAFRGLAYRKYKGEMLYLEWAPENVFAVPEEEEE--------------VQDEATAAA 779
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ + + V E E E TT+++KNLNF + ++++ F+ CG I S VA
Sbjct: 780 PKISLAAIRGVHGQGEAAVELESTASTTVFVKNLNFETGDNALYNLFQTCGTIRSCRVAT 839
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
KK+P +P + LSMG+GFV+F T +A+K LQ + LD H++ELK S R + + V
Sbjct: 840 KKNPHNPQELLSMGFGFVEFKTHAEAVKAMKKLQGAELDGHKLELKLSTRTQQQQGP-VA 898
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
R+ + K +K++VRN+ F+A + ++ +LF +G++K VRLP K HRGF FVE
Sbjct: 899 RREGKLIKGATTKVVVRNVAFEATKKDIRQLFTPYGDVKSVRLPPKSFDPTQHRGFAFVE 958
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKR 776
F +K EAK A +AL STHLYGRRL LE+A++ ++VE +R +
Sbjct: 959 FSSKEEAKSAFEALSGSTHLYGRRLNLEFAKDDNSVEKLRSK 1000
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 114/215 (53%), Gaps = 41/215 (19%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL--------GMAYIGFKDEKNCNKALNK 277
T ++ LP ++ ++ +F PL + +R FL G+A++ F +++ AL K
Sbjct: 397 TAKLQGLPFRCTEQQVREFFSPLSVVDIR--FLLDRRKRGKGVAFVDFATKRDYKAALKK 454
Query: 278 NKSFW----------KGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSV 327
++ K ++L K ++ AK A ++ ++
Sbjct: 455 HRQTLGPRFVEVLPSKTRKLPALKPTEGREAKVYPAPLGEDDKGLD-------------- 500
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
E+GRIFVRNL+Y TEDD+ LFEK+GPL+EV +P+D +T K KG A VTFL
Sbjct: 501 -------ETGRIFVRNLAYVCTEDDIRALFEKFGPLSEVHMPLDTQTKKPKGIAFVTFLH 553
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNV 422
PE+A +A+ LD +VF GR+LHL+P + ++++ +
Sbjct: 554 PENAVKAFTQLDASVFKGRLLHLLPARTRDSDSGI 588
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 130/319 (40%), Gaps = 59/319 (18%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYF--------------KPLPLAS------VRTTFL 258
V R I+VKNLP + DL+ F + + L S R F
Sbjct: 681 VTGRSKTVILVKNLPFNSTEADLRPMFEKHGAVDKFVFPPSRTMALVSFIEPSEARAAFR 740
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G+AY +K E + + N++ ++ A S+ I+
Sbjct: 741 GLAYRKYKGEM----------LYLEWAPENVFAVPEEEEEVQDEATAAAPKISLAAIRGV 790
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKE 373
H + E +V+ + S +FV+NL++ ++ L LF+ G + + P + +
Sbjct: 791 HGQG-EAAVEL--ESTASTTVFVKNLNFETGDNALYNLFQTCGTIRSCRVATKKNPHNPQ 847
Query: 374 TDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISE 432
+ GF V F A +A + L G G L L + + ++ +G V + E
Sbjct: 848 ELLSMGFGFVEFKTHAEAVKAMKKLQGAELDGHKLELKLSTRTQQQQGPVARR------E 901
Query: 433 RKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------- 485
KL + A +K ++V+N+ + D++ LF P+GD+ V +PP
Sbjct: 902 GKL-----IKGATTK--VVVRNVAFEATKKDIRQLFTPYGDVKSVRLPPKSFDPTQHRGF 954
Query: 486 GLVEFLQKNQAKAAFNSLA 504
VEF K +AK+AF +L+
Sbjct: 955 AFVEFSSKEEAKSAFEALS 973
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
K + +L+ F E G +T Q+ Y + RR A++GY E A+ A++Y N TY+ + +
Sbjct: 14 KFNESRLRTIFGEHGDIT--QILYLPK---RRIAYVGYSEEKMAEGAVEYRNETYIDTDQ 68
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKND 144
IKV +GD P+ WS+Y+ SSA L K E K GKK++ +
Sbjct: 69 IKVSLAFGVGDERIPRPWSQYSKGSSANAALQK-------KREMVLRQKKGKKAQEE 118
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT--KGFALVTFLMPEHATQAY 395
++ VRN+++ T+ D+ +LF YG + V LP K D T +GFA V F E A A+
Sbjct: 911 KVVVRNVAFEATKKDIRQLFTPYGDVKSVRLP-PKSFDPTQHRGFAFVEFSSKEEAKSAF 969
Query: 396 QHLDGTVFL-GRMLHL 410
+ L G+ L GR L+L
Sbjct: 970 EALSGSTHLYGRRLNL 985
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 86/217 (39%), Gaps = 23/217 (10%)
Query: 570 EEDEEREPEPDTTLY---IKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
EEDE E ++ ++ L F TE +R F P++ V + D + G+
Sbjct: 382 EEDEASEQGDSIIVFTAKLQGLPFRCTEQQVREFF---SPLSVVDIRFLLDRRKRGK--- 435
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIE-LKRSNRNLESEATTVKRKSSNVAKQTG 685
G FV F T+ ALK +L +E L R L + T R++ G
Sbjct: 436 -GVAFVDFATKRDYKAALKK-HRQTLGPRFVEVLPSKTRKLPALKPTEGREAKVYPAPLG 493
Query: 686 ---------SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
+I VRN+ + + ++ LF+ FG L V +P + +G FV F+
Sbjct: 494 EDDKGLDETGRIFVRNLAYVCTEDDIRALFEKFGPLSEVHMPLD-TQTKKPKGIAFVTFL 552
Query: 737 TKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDI 773
A +A L S GR L L A D+ I
Sbjct: 553 HPENAVKAFTQLDASV-FKGRLLHLLPARTRDSDSGI 588
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNS 502
I V+NL Y D++ALFE FG L V +P P GI V FL A AF
Sbjct: 505 IFVRNLAYVCTEDDIRALFEKFGPLSEVHMPLDTQTKKPKGI-AFVTFLHPENAVKAFTQ 563
Query: 503 LAYTKFKEVPLYL 515
L + FK L+L
Sbjct: 564 LDASVFKGRLLHL 576
>gi|389743141|gb|EIM84326.1| hypothetical protein STEHIDRAFT_170049 [Stereum hirsutum FP-91666
SS1]
Length = 779
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 223/805 (27%), Positives = 369/805 (45%), Gaps = 116/805 (14%)
Query: 29 ITQEQLKAKFEEK----GTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
IT ++LK F + GT+TDV++ + +G RRF F+GY + +A A ++F+ T++
Sbjct: 13 ITPDRLKEYFSQSKGPGGTITDVKVAHKQDGTSRRFGFVGYKTDAEAAKAKEWFDKTFLD 72
Query: 85 SSRIKVEKCSNLGDTTKPK--SWSKYAPDSSAYQKLHNIAPKQDLKP----------EHT 132
++R++V+ D P+ + P S + PK + K E
Sbjct: 73 TARVRVDVVDGAKDAPAPRPNKRPRLGPSPSEAASEAALGPKTNAKKSSKSKDSQLDEFL 132
Query: 133 KDSKPGKKSKNDPTFSDFLQLHGKDVSKLLPLSNKDGE---EKEEENEDESNNQIAHADI 189
+ +P +S+ P+++D + +D + S++ + EK + E+E +
Sbjct: 133 QVMQP--RSRKGPSWADAPEAP-EDTATQSKKSDRQAKSDVEKSQPVEEEPPE-----GM 184
Query: 190 SDMEYLKLKTKSK-DTA-------PSDPSVPPVSKAPVHKR--------------QYHTI 227
SDME+L+ + + +TA SD +A V ++ Q +
Sbjct: 185 SDMEWLRARMRQDVETAVPEKAFEQSDDEEMDTGEALVPEQKEEERSDPTKETILQTARL 244
Query: 228 VVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCNKALNK-N 278
V+NL + +L+ F+P +P+ G+AY+ F A +
Sbjct: 245 FVRNLAFACTEDELRELFRPFGEISQIHIPIDPKTKQPKGLAYVSFVQPTAALAAYETLD 304
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
+ ++G+ L+I GA D N ++E+ K KS +D + + A +G+
Sbjct: 305 RKSFQGRLLHIL-----------GAVDRKGNIAVEDADGKK-KSLKDE-RGEKKKATAGK 351
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
F ++ Y ++ L+ + ++ IL + K T ++ E T+AY
Sbjct: 352 EFNWSMLYMNSDAVLSSVADRMNLSKSDILDPESPNAAVKLALAETHVISE--TKAYLES 409
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
G + S + RS ILVKN+PY
Sbjct: 410 QGVILS--------------------------SFSDSSSTPTTRTHRSDTTILVKNIPYG 443
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
T ++ +FE G+L RVLVPP G +VEF+ ++A+ AF ++AY + +YLE
Sbjct: 444 TTADQIREMFETHGELSRVLVPPAGTMAVVEFVHPDEARKAFRAVAYRRLGNSVIYLEKG 503
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
P G+F E E ++G + K T E+D + + +EE
Sbjct: 504 PAGMFQEPAEPAQGTKVADG----------VKPVTVEDDATGSAIRISAD---EEEPSMA 550
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
+TL++KNL F++T + + + FK A + K DPK P LSMGYGFV F T E
Sbjct: 551 AGSTLFVKNLAFSTTAERLNQVFKHLPSFAFARIQTKPDPKRPNARLSMGYGFVGFKTTE 610
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+ALK +Q LD H + +K + R +E + + K +K+LV+N+PF+A
Sbjct: 611 GAKKALKGMQGYVLDGHALSVKFAGRGVEEDEAAGGEGAKKGGKSRTTKMLVKNVPFEAT 670
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
+ E+ ELF + G+LK VR+PK+ RGF F+EF+T+ EA+ A AL + THL GR
Sbjct: 671 KKEIRELFGSHGQLKSVRVPKRF--DHRTRGFAFLEFVTRQEAENAYNAL-KHTHLLGRH 727
Query: 759 LVLEWAEEAD-NVEDIRKRTNRYFG 782
LVLEWAEE D +VE++RK+ FG
Sbjct: 728 LVLEWAEEGDMDVEELRKKAGVGFG 752
>gi|393912130|gb|EJD76605.1| RNA recognition domain-containing protein [Loa loa]
Length = 874
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 225/394 (57%), Gaps = 52/394 (13%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD F++ RS +I++KNL + +LK +F G + ++L+PP GIT ++E
Sbjct: 449 LDVFSRPAAKRSNTVIIIKNLTTKVDIDELKRMFARHGPVKQLLMPPGGITAILEMENSI 508
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEK-----------EKNEEE-- 541
A+ AF++LAYT+F+ PL+LEWAP +F K +SK ++K E+N+ E
Sbjct: 509 DAQKAFSTLAYTRFRSQPLFLEWAPYDLFKSGKLESKDEDKSQKQHSLEVQTERNDNEFS 568
Query: 542 -------------------GEEGEEEKK--------ENTAEEDNQQGVPEVE-------- 566
E E +KK E A + + Q EVE
Sbjct: 569 AEDKKKLRRSKKHQLIKEPTEVAESQKKAESVKTINETIARDGDMQQRAEVEKYMAEIRN 628
Query: 567 ENVEEDEEREPE---PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E+ +D E E + P TTL++KNL+F +T++ ++ F+ I S TV++K+D P +
Sbjct: 629 EDSNDDAEEEDDRLLPGTTLFVKNLSFKTTDEGLKNKFESRFRIRSATVSKKRDAVDPTK 688
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
LSMG+GF+ FY E QA+K +Q LD H + LK S+R + + T ++ + +
Sbjct: 689 ALSMGFGFITFYQPEDAQQAIKEMQGVLLDGHCLMLKLSHREVVPDKITARKGVVELEQG 748
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG-LHRGFGFVEFITKNEAK 742
+KIL+RNIPFQA + EV++LF FGE++ R+PKK+ S HRGFGFV+F+T+++A+
Sbjct: 749 EATKILIRNIPFQATRKEVKQLFATFGEIRSFRMPKKVGASAEGHRGFGFVDFLTRSDAR 808
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKR 776
RA L STH YGRRLVLEWA+ +N+E++R++
Sbjct: 809 RAFSGLVHSTHFYGRRLVLEWAKPDNNLEELREK 842
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 118/206 (57%), Gaps = 19/206 (9%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASV---RTTFLGMAYIGFKDEKNCNKALNKNKSFW 282
++++ P VK K +K +F P+ L + R + +A++ F + + KAL +N F+
Sbjct: 176 SLIISGFPRTVKAKGIKDWFSPIKLKGIKISRGSTEAIAFVTFFQQSDVRKALRRNGQFF 235
Query: 283 KGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA-EDIAESGRIFV 341
G +L + K S +N S + ++ K++E V+ + I E+GR+FV
Sbjct: 236 GGSKLEVTKVS-------------SNRVSDDGMEDYIHKTREAEVEASVAKILETGRLFV 282
Query: 342 RNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGT 401
RNL Y +++DL LF+KYG ++++ + I K+T + KGFA+VT++ PE A A+ LDG+
Sbjct: 283 RNLPYVCSDEDLRYLFKKYGEISDLQVIISKKTGQCKGFAIVTYVFPESAVAAFSALDGS 342
Query: 402 VFLGRMLHLIPGKPKE--NEGNVDGK 425
+ GRMLH++PG+ K E + GK
Sbjct: 343 ILKGRMLHILPGEEKREVEETGITGK 368
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 84/129 (65%), Gaps = 4/129 (3%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E+L+ F GT+TD LKYT +GKFRRFAF+G+ + AQ A + +NT++ +SR+
Sbjct: 14 TEEKLRDHFGSFGTITDCSLKYTIDGKFRRFAFVGFETDGNAQKARENLHNTFMGASRLT 73
Query: 90 VEKCSNLGDTTKPKSWSKYAPDSSAYQKLH-NIAPKQDLKPEHTKDSKPGKK---SKNDP 145
VE+C GD TKP++WSKYA SSAY++LH ++ + KDS P K ++ND
Sbjct: 74 VEECKPFGDDTKPRAWSKYAKGSSAYKRLHPEEEEEKTKEIVSVKDSSPSPKKMRNENDE 133
Query: 146 TFSDFLQLH 154
F DF+Q+
Sbjct: 134 EFHDFIQVQ 142
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 30/209 (14%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE-TDKTK----GFALVTFLMPEHATQ 393
+FV+NLS+ T++ L FE + + ++ D TK GF +TF PE A Q
Sbjct: 648 LFVKNLSFKTTDEGLKNKFESRFRIRSATVSKKRDAVDPTKALSMGFGFITFYQPEDAQQ 707
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI--IL 451
A + + G + G L L H + K+ A VVE IL
Sbjct: 708 AIKEMQGVLLDGHCLMLKLS-------------HREVVPDKITARKGVVELEQGEATKIL 754
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT-------GLVEFLQKNQAKAAFNSL 503
++N+P++ ++K LF FG++ +P G + G V+FL ++ A+ AF+ L
Sbjct: 755 IRNIPFQATRKEVKQLFATFGEIRSFRMPKKVGASAEGHRGFGFVDFLTRSDARRAFSGL 814
Query: 504 AY-TKFKEVPLYLEWA-PEGVFAEAKEKS 530
+ T F L LEWA P+ E +EK+
Sbjct: 815 VHSTHFYGRRLVLEWAKPDNNLEELREKA 843
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 28/160 (17%)
Query: 630 GFVQFYTRESLNQAL---------------KVLQNSSLDEHQIELKRSNRNLESEATTVK 674
FV F+ + + +AL KV N D+ + R E EA+ K
Sbjct: 214 AFVTFFQQSDVRKALRRNGQFFGGSKLEVTKVSSNRVSDDGMEDYIHKTREAEVEASVAK 273
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGF 732
+TG ++ VRN+P+ ++ LFK +GE+ V + KK +G +GF
Sbjct: 274 ------ILETG-RLFVRNLPYVCSDEDLRYLFKKYGEISDLQVIISKK---TGQCKGFAI 323
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVED 772
V ++ A A AL S L GR L + EE VE+
Sbjct: 324 VTYVFPESAVAAFSALDGSI-LKGRMLHILPGEEKREVEE 362
>gi|427792771|gb|JAA61837.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 687
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/408 (40%), Positives = 233/408 (57%), Gaps = 61/408 (14%)
Query: 46 DVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSW 105
D+QLKYT EG FRRFAF+G+ E QA AA +YFNN+Y+ +S+++VE C+ LGD KP+SW
Sbjct: 1 DLQLKYTKEGVFRRFAFVGFKDEAQAAAAKEYFNNSYLDTSKLQVEICAALGDEQKPRSW 60
Query: 106 SKYAPDSSAYQKLH----------NIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQLHG 155
SKY+ DSSAYQ+LH +P+++ E KD + K+ F +FL++HG
Sbjct: 61 SKYSADSSAYQRLHPETKKPKPVKEQSPRKNFADEFLKDLEGNKE------FEEFLKVHG 114
Query: 156 K------DVSKLLPLSNKDGEEKE----------------EENEDESNNQIAHADISDME 193
D P N DGE K+ EE +++ ++ D S+
Sbjct: 115 THNKVTWDNDTRAP--NADGEAKKGKPAKAVPPPKSAAKDEEEDEDDADEEEPKDDSNKA 172
Query: 194 YLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASV 253
K K D P K PV + Y T+ VK LP KKK +K +FKP +AS+
Sbjct: 173 PASSKAKENDKQQQAPQQKQKPKLPVQEFAY-TLKVKGLPYNCKKKQIKDFFKPAKVASL 231
Query: 254 RTT--FLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNAS 311
R G+AY+GFK E++ +ALNK+ SF G +L++ KY+K
Sbjct: 232 RLPPKVRGIAYLGFKKEQDMKQALNKHHSFMAGHRLDVTKYAK----------------- 274
Query: 312 MENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPID 371
+ + K W+ ED E +A++GRIF+RNLSYT+TE++L +LF+KYGPL EV L ID
Sbjct: 275 -QVVPEKKWRQFEDLGNPQETLADTGRIFIRNLSYTITEEELEELFKKYGPLEEVHLSID 333
Query: 372 KETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
+ T K KGFA V+FL PEHA +A+ LDG + GR+LHL+P K K++E
Sbjct: 334 RVTRKPKGFAFVSFLFPEHAIRAFTELDGQMLQGRLLHLLPAKAKKSE 381
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 152/222 (68%), Gaps = 11/222 (4%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAFN+ RSK +ILVKNLP +T P DL ++F FG L RV++PP+G+T L+EF
Sbjct: 471 LDAFNRPATERSKTVILVKNLPAKTPPKDLHSVFGKFGILSRVVLPPWGVTALIEFQDPT 530
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+AAF LAY+KFK VPLYLEWAP GVF+ K K K EGE + K+
Sbjct: 531 EARAAFRRLAYSKFKHVPLYLEWAPTGVFSTEKSADKSK---------TEGETKTKDT-- 579
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
E+ + + + EE E +EE PEPDTTL+IKNLNF++ E+++R HF++CGPI VT+A+
Sbjct: 580 EQKHAEQPADEEEEAENEEEIPPEPDTTLFIKNLNFSTDEEAVREHFEQCGPIHEVTIAK 639
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQ 656
KKD K+PGQ LSMGYGFVQF R++ QALK L + L + Q
Sbjct: 640 KKDTKNPGQLLSMGYGFVQFKQRKAAKQALKQLXTARLLQVQ 681
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 18/212 (8%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS--VRTTFLGMAYIGFKDEKNCNKAL 275
P +R I+VKNLPA KDL + F + S V + A I F+D A
Sbjct: 477 PATERSKTVILVKNLPAKTPPKDLHSVFGKFGILSRVVLPPWGVTALIEFQDPTEARAAF 536
Query: 276 NKNKSFWKGKQLNIY-------KYSKDNSAKYSGAADDNNNASME--NIKAKHWKSQEDS 326
+ ++ K K + +Y +S + SA S + E + + + +E
Sbjct: 537 RR-LAYSKFKHVPLYLEWAPTGVFSTEKSADKSKTEGETKTKDTEQKHAEQPADEEEEAE 595
Query: 327 VQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFA 381
+ +F++NL+++ E+ + + FE+ GP+ EV + K+T + G+
Sbjct: 596 NEEEIPPEPDTTLFIKNLNFSTDEEAVREHFEQCGPIHEVTIAKKKDTKNPGQLLSMGYG 655
Query: 382 LVTFLMPEHATQAYQHLDGTVFLG-RMLHLIP 412
V F + A QA + L L + L+P
Sbjct: 656 FVQFKQRKAAKQALKQLXTARLLQVQACTLVP 687
>gi|440789720|gb|ELR11019.1| RNA binding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 838
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 218/355 (61%), Gaps = 28/355 (7%)
Query: 417 ENEG-NVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLG 475
+NEG N++G +E K++ RSK +ILVKN+P++T +L+ +F FG +
Sbjct: 493 KNEGINMEGITAIMAAEGKVE--------RSKTMILVKNIPHQTKLEELRDMFSKFGSVS 544
Query: 476 RVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEK 535
RV++PP L+E+L+ ++A+ F +LAYTKF VPLYLEWAP + + +K
Sbjct: 545 RVILPPARTLALIEYLEPSEARRGFKNLAYTKFHHVPLYLEWAPLAIIGQKPDKP----- 599
Query: 536 EKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTED 595
E E+ ++ +++ T D + + E EE E TTLY+KNLNF +T+D
Sbjct: 600 ESLEDADDDDDDDAPIKTTVTDKSK--------LLEAEEMERLEGTTLYVKNLNFKTTDD 651
Query: 596 SIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEH 655
+R F+K P+ SVTVA++KD K GQ +S+GYGFV+F R+ +A+K LQ LD H
Sbjct: 652 GLRTMFEKVAPVRSVTVAKRKDVKKGGQMISLGYGFVEFVKRDGALKAIKQLQGKQLDNH 711
Query: 656 QIEL--KRSNRNLESEATTVKRKSSNVAKQTGS-KILVRNIPFQAKQSEVEELFKAFGEL 712
+E+ + R +++ + KRK++ + + ILV+N+ F+A ++E+ ELF FG+L
Sbjct: 712 ALEITFAKGGRKADTKQQSNKRKAAQGTQMKPTCTILVKNVAFEATKAEIRELFATFGQL 771
Query: 713 KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEA 767
K VR+PKKM G RGF FV+FITK EAK A ++L Q THLYGR LVLE+ + +
Sbjct: 772 KSVRVPKKM--DGRARGFAFVDFITKQEAKNAFQSL-QDTHLYGRHLVLEFVQNS 823
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 65/80 (81%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
++GR+FVRNL ++ +EDDL KLF+K+G ++EV +PID+ET K +G A VTF++PE A QA
Sbjct: 325 DTGRLFVRNLPFSASEDDLYKLFKKHGDISEVHIPIDRETKKPRGMAYVTFMLPEVAAQA 384
Query: 395 YQHLDGTVFLGRMLHLIPGK 414
+ LDG++F GR+LH++P K
Sbjct: 385 HAALDGSIFQGRLLHIMPAK 404
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 61/87 (70%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++L+ F ++G VTDV++ T +G+ R F FIG+ E +A+AA+++FNNT++ +S+I
Sbjct: 1 MKEDRLRQHFGQRGEVTDVKIMKTADGRSRLFGFIGFRTEKEAKAAMNFFNNTFIDTSKI 60
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAY 115
VE +GDT P+ WSKY+ SS +
Sbjct: 61 SVEMARPVGDTALPRPWSKYSKGSSLH 87
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 20/195 (10%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPE 389
E ++V+NL++ T+D L +FEK P+ V + K+ K + G+ V F+ +
Sbjct: 635 EGTTLYVKNLNFKTTDDGLRTMFEKVAPVRSVTVAKRKDVKKGGQMISLGYGFVEFVKRD 694
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A +A + L G L + K G ++RK Q + +
Sbjct: 695 GALKAIKQLQGKQLDNHALEITFAK-----GGRKADTKQQSNKRKA---AQGTQMKPTCT 746
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSL 503
ILVKN+ + +++ LF FG L V VP G V+F+ K +AK AF SL
Sbjct: 747 ILVKNVAFEATKAEIRELFATFGQLKSVRVPKKMDGRARGF-AFVDFITKQEAKNAFQSL 805
Query: 504 AYTKFKEVPLYLEWA 518
T L LE+
Sbjct: 806 QDTHLYGRHLVLEFV 820
>gi|308450796|ref|XP_003088431.1| hypothetical protein CRE_22247 [Caenorhabditis remanei]
gi|308247287|gb|EFO91239.1| hypothetical protein CRE_22247 [Caenorhabditis remanei]
Length = 901
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/384 (39%), Positives = 220/384 (57%), Gaps = 38/384 (9%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYG-ITGLVEFLQ 492
KLDAF++ E RS +++ KNLP +LK +FE FGD +VL+P G ++ LV
Sbjct: 493 KLDAFSKPAEKRSDTVMIAKNLPSGVETEELKRMFEKFGDCQKVLMPAEGGVSALVIMGN 552
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFA------EAKEKSKGKEKEKNEEEGEEGE 546
AK AF +LAY++F+ PLYLEWAP V E EK+ K K + E
Sbjct: 553 PVDAKKAFRALAYSRFRSQPLYLEWAPFDVMGATVPSTETSEKTDDSTKPKKSKREMTYE 612
Query: 547 EEKKENTAEEDNQQGVPEVEEN---------VEEDEEREPEPD----------------- 580
E+KKE ++ QQG+ E EE VE E+++PEP
Sbjct: 613 EKKKER---KNRQQGITEEEEEVEKKSNEEEVEVPEDKKPEPSETKPKKAKQPEKEIESG 669
Query: 581 TTLYIKNLNFNSTEDSIRRHFKK--CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
+T+++KNL F++T+ + F+K + S +++K +P P + LSMG+GFVQFYT
Sbjct: 670 STIFVKNLAFDTTDYGLETLFRKRYGDLLKSAQISKKLNPAEPTKPLSMGFGFVQFYTAF 729
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
ALK +Q LD H +ELK S+R + + ++ + +K+LVRN+PF+A
Sbjct: 730 DAKTALKEMQGELLDGHSLELKISHREVVDKGALKRKDVQKKDQGECTKLLVRNLPFEAS 789
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
EVE LF+ FG +K +R+P+K HRGFGFV+FI+ +EA+RA AL STHLYGRR
Sbjct: 790 IKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISADEARRAFDALVHSTHLYGRR 849
Query: 759 LVLEWAEEADNVEDIRKRTNRYFG 782
LVLEWA+E + VE++R++T F
Sbjct: 850 LVLEWAKEDETVEELREKTAEKFA 873
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 201/396 (50%), Gaps = 40/396 (10%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
T++QL+ FE+ G ++D LKYT EGKFR FAF+G+ E A A+ N T+ S R+
Sbjct: 23 CTEQQLRKFFEKYGKISDASLKYTKEGKFRGFAFVGFLDEGSASNAIAKSNQTFFNSKRL 82
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSK--PGKKSKNDPT 146
VE+C GD KP++WSKYA DSSAY++ H + KP + DS+ KK KNDP
Sbjct: 83 TVEECRPFGDANKPRAWSKYAKDSSAYKRAH--GEDGNDKPGKSDDSEEPSAKKQKNDPK 140
Query: 147 FSDFLQLHGKDVSKLLPLS-NKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTA 205
FL+ G V K + LS +K E K+ E Q Y + S DT+
Sbjct: 141 LDQFLEAKGVAVEKEVKLSKDKSAEAKKLMAELMDGIQGKFVINISCAYFFI---SGDTS 197
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASV---RTTFLGMAY 262
S ++ LP+ K K++K + P+ + ++ R + A+
Sbjct: 198 LS-------------------LIFSGLPSSAKGKNIKEWLNPIRVKAMKIARNEDVAAAF 238
Query: 263 IGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKS 322
+ F + +AL K+ F G ++ I K K ++E A+
Sbjct: 239 VTFNRPPDVRRALQKDGQFLGGFKIGIEKIETPEPEK----------ETVEEHGAEFESR 288
Query: 323 QEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFAL 382
+++ E I E+GR+F+RNL Y EDDL LF+KYG ++EV + IDK+T KGFA+
Sbjct: 289 EKEEESVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGSCKGFAI 348
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
V F+ PE A AY LDG VF GRM+H+I G K +
Sbjct: 349 VEFVFPEAAVAAYSALDGYVFKGRMMHIIAGDEKRD 384
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEK-YGPL------AEVILPIDKETDKTKGFALVT 384
+I IFV+NL++ T+ L LF K YG L ++ + P + + GF V
Sbjct: 665 EIESGSTIFVKNLAFDTTDYGLETLFRKRYGDLLKSAQISKKLNPAEPTKPLSMGFGFVQ 724
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLDAFNQVVE 443
F A A + + G + G L L I + ++G + + + +Q
Sbjct: 725 FYTAFDAKTALKEMQGELLDGHSLELKISHREVVDKG--------ALKRKDVQKKDQGEC 776
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQA 496
+ +LV+NLP+ +++ LFE FG + + +P + G V+F+ ++A
Sbjct: 777 TK----LLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISADEA 832
Query: 497 KAAFNSLAY-TKFKEVPLYLEWAPE 520
+ AF++L + T L LEWA E
Sbjct: 833 RRAFDALVHSTHLYGRRLVLEWAKE 857
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 156/379 (41%), Gaps = 89/379 (23%)
Query: 219 VHKRQYHT-IVVKNLPAGVKKKDLKAYFK---PLPLASVRTT----FLGMAYIGFKDEKN 270
V R T ++VKNLP+ ++ L+ +F+ + AS++ T F G A++GF DE +
Sbjct: 5 VGSRHMTTRLIVKNLPSTCTEQQLRKFFEKYGKISDASLKYTKEGKFRGFAFVGFLDEGS 64
Query: 271 CNKALNK-NKSFWKGKQLNI---------------YKYSKDNSAKYSGAADDNNNA---- 310
+ A+ K N++F+ K+L + KY+KD+SA +D N+
Sbjct: 65 ASNAIAKSNQTFFNSKRLTVEECRPFGDANKPRAWSKYAKDSSAYKRAHGEDGNDKPGKS 124
Query: 311 -SMENIKAKHWKSQEDSVQFAE---------------DIAESGRI-----------FVRN 343
E AK K+ QF E AE+ ++ FV N
Sbjct: 125 DDSEEPSAKKQKNDPKLDQFLEAKGVAVEKEVKLSKDKSAEAKKLMAELMDGIQGKFVIN 184
Query: 344 LS----YTVTEDDLTKLF-------------EKYGPLAEVILPIDKETDKTKGFALVTFL 386
+S + + L+ +F E P+ + I + D F VTF
Sbjct: 185 ISCAYFFISGDTSLSLIFSGLPSSAKGKNIKEWLNPIRVKAMKIARNEDVAAAF--VTFN 242
Query: 387 MPEHATQAYQHLDGTVFLGRMLHL----IPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
P +A Q DG G + + P +P++ G + + +++
Sbjct: 243 RPPDVRRALQK-DGQFLGGFKIGIEKIETP-EPEKETVEEHGAEFESREKEEESVREKIL 300
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG------LVEFLQKNQA 496
E + R+ L +NLPY T DL+ LF+ +G++ V V TG +VEF+ A
Sbjct: 301 E--TGRLFL-RNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGSCKGFAIVEFVFPEAA 357
Query: 497 KAAFNSLAYTKFKEVPLYL 515
AA+++L FK +++
Sbjct: 358 VAAYSALDGYVFKGRMMHI 376
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/351 (37%), Positives = 222/351 (63%), Gaps = 23/351 (6%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS +LVKN+P++T +L+ LF FG+L RV++ P L+E+L N+AK+ F +LA
Sbjct: 525 RSNTTLLVKNIPFKTDEEELELLFSKFGELARVVLAPARTIALIEYLHPNEAKSGFKNLA 584
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
YTKF VPLYLEWAPEGVF K + ++ + + + + +KE + +E + +
Sbjct: 585 YTKFHHVPLYLEWAPEGVF---KNPAPPRDPKPKQATAKTTDSSRKETSTKETSTKETST 641
Query: 565 VEENVEEDEEREPEPDTT-----------LYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
E + ++ +E+ + DT ++IKNLN+ ++ +++ FK SV +A
Sbjct: 642 KETSTKDTKEQPKQKDTKSSSTNQETHQFVFIKNLNWKTSNETLEGKFKSLKDFISVNIA 701
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR---NLESEA 670
K +PK PG+ L G+GF++F +++ + +K L +++D+H+I LK S++ N++++
Sbjct: 702 TKPNPKKPGERLPCGFGFIEFSSKQGAYECIKRLNGATIDDHEISLKLSDKNEVNVKAKE 761
Query: 671 TTVKRKSS---NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 727
++SS N + SKI+++N+PF++ E+ +LF A+GE++ VR+PKK +G H
Sbjct: 762 MPENKRSSLPQNAKSKPSSKIIIKNLPFESTTKEIRKLFAAYGEIQSVRIPKK--PNGGH 819
Query: 728 RGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTN 778
RGFGFVEF+T+ EAK AM+AL S+H YGR LVL++AE+ NV+++R++ N
Sbjct: 820 RGFGFVEFLTEEEAKNAMEALG-SSHFYGRHLVLQYAEQDKNVDELREKAN 869
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 66/92 (71%)
Query: 323 QEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFAL 382
+ D + ED+ +SGRIF+RNLSYT E+DL K+F KYG ++E+ +PI+ E+ ++ G A
Sbjct: 329 EHDYTKEEEDVGDSGRIFIRNLSYTTKEEDLEKVFSKYGKISEIHIPINYESKQSIGIAF 388
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGK 414
+ +L+PE+A A +DG VF GR++H++P K
Sbjct: 389 ILYLIPENAVTALNEMDGKVFQGRIIHVLPAK 420
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T ++ K FE+ G VTD ++ +GK R F FIG+ E+ A+ AL N T++ +S+I
Sbjct: 15 LTDKRFKEHFEKFGVVTDAKI-IKKDGKSRLFGFIGFANENSAKNALS-LNGTFIDTSKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLK 128
VE + GD+ + WSKY+ SSA +K+ + +++LK
Sbjct: 73 VVEIATLAGDSEAQQPWSKYSEGSSANRKVQTLEKEKELK 112
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 20/141 (14%)
Query: 639 SLNQALKVLQNSSLDEHQIEL------------KRSNRNLESEATTVKRKSSNVAKQTGS 686
SL + K+ Q LD +Q++L + + LE + + + +K++ +
Sbjct: 469 SLAERYKMTQGQLLDPNQVDLAVRMTLMETHVINETKKFLEEQGVIITDIGNKGSKRSNT 528
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+LV+NIPF+ + E+E LF FGEL V L R +E++ NEAK K
Sbjct: 529 TLLVKNIPFKTDEEELELLFSKFGELARVVL-------APARTIALIEYLHPNEAKSGFK 581
Query: 747 ALCQSTHLYGRRLVLEWAEEA 767
L T + L LEWA E
Sbjct: 582 NLAY-TKFHHVPLYLEWAPEG 601
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-----GFALVTFLMPEHATQ 393
+F++NL++ + + L F+ V + K GF + F + A +
Sbjct: 671 VFIKNLNWKTSNETLEGKFKSLKDFISVNIATKPNPKKPGERLPCGFGFIEFSSKQGAYE 730
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ L+G + L +NE NV K + E K + Q +++ I++K
Sbjct: 731 CIKRLNGATIDDHEISL--KLSDKNEVNVKAKE---MPENKRSSLPQNAKSKPSSKIIIK 785
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP--PYGIT---GLVEFLQKNQAKAAFNSLAYTKF 508
NLP+ + +++ LF +G++ V +P P G G VEFL + +AK A +L + F
Sbjct: 786 NLPFESTTKEIRKLFAAYGEIQSVRIPKKPNGGHRGFGFVEFLTEEEAKNAMEALGSSHF 845
Query: 509 KEVPLYLEWA 518
L L++A
Sbjct: 846 YGRHLVLQYA 855
>gi|302810024|ref|XP_002986704.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
gi|300145592|gb|EFJ12267.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
Length = 730
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 201/333 (60%), Gaps = 37/333 (11%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS R+ILVKNLP+ T DL +F P+G LGR+++PP +VEFL+ ++A+ AF SLA
Sbjct: 413 RSSRVILVKNLPFSTTEVDLFGVFCPYGSLGRLVLPPTKTVAIVEFLESSEARKAFESLA 472
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y KFK VPLYLEWAP+ + + EKK+ +G
Sbjct: 473 YRKFKHVPLYLEWAPQDLLS-----------------------EKKDGGVVPAKLEGTSM 509
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKKDPKSP 621
++ V DE +T+++KNLNF +T+ S+R+HF+ K G + + TV RK P
Sbjct: 510 KDQLVANDEGAASTRSSTVFVKNLNFKTTDASLRKHFEGRVKAGSLRTATVKRK--PSKT 567
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
G LSMG+GFV+F + ++ + K +Q S LD H + L+ S + + + V A
Sbjct: 568 GASLSMGFGFVEFDSADTAERVCKEMQGSVLDGHALVLQPSRAGDDEKPSKVD------A 621
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
K + SK++VRN+ F+A + ++++LF FG++K V+LPKK G+ HRGF FVEF+TK EA
Sbjct: 622 KGSSSKLIVRNVAFEATRKDLKQLFSPFGQVKKVKLPKKFDGN--HRGFAFVEFVTKQEA 679
Query: 742 KRAMKALCQSTHLYGRRLVLEWAEEADNVEDIR 774
+ A +AL S+HLYGR LVLEWA E + ++++R
Sbjct: 680 QNAFEALG-SSHLYGRHLVLEWAREGETLDELR 711
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
Query: 330 AEDIAES--GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
A+D+AE+ GR+FVRNL+YT +E++L LF +YG + +V L DKET+++KG+ V F +
Sbjct: 216 AQDVAETDTGRLFVRNLAYTTSEEELASLFGQYGEVVQVHLICDKETNRSKGYGYVGFTL 275
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
PE AT+A LD ++F GR+LH++P K + ++
Sbjct: 276 PEEATRAMTELDNSIFQGRLLHVLPAKQQTSQ 307
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 102/180 (56%), Gaps = 6/180 (3%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T ++L+ F KG VTD ++ T +GK RRF F+G++ +++A++A+ YFN +++ +SR+
Sbjct: 16 VTDDKLREHFGAKGQVTDAKVMRTRDGKSRRFGFVGFYSQEEAESAVAYFNRSFLDTSRL 75
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
E ++GD + WS+++ SSAY+K H K LKP+ T + + DP
Sbjct: 76 VCEVARSVGDAA-VRPWSRHSKGSSAYEKTHAPEEKAQLKPKKTVSVD--RDQEQDPGLD 132
Query: 149 DFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPSD 208
+FL + + +K +N D + ++ ++++ +SD+ YLK K + + + SD
Sbjct: 133 EFLSVM-QPRTKTKVWANDDAKLTTQQPSSKASDDA--GPVSDLYYLKSKVRQQWSDDSD 189
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 140/331 (42%), Gaps = 54/331 (16%)
Query: 214 VSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP------LPLASVRTTFLGMAYIGFKD 267
SK R I+VKNLP + DL F P L L +T +A + F +
Sbjct: 405 ASKTSGVTRSSRVILVKNLPFSTTEVDLFGVFCPYGSLGRLVLPPTKT----VAIVEFLE 460
Query: 268 EKNCNKALNKNKSFWKGKQLNIY-KYSKDN--SAKYSGAADDNNNASMENIKAKHWKSQE 324
KA ++ ++ K K + +Y +++ + S K G A +E S +
Sbjct: 461 SSEARKAF-ESLAYRKFKHVPLYLEWAPQDLLSEKKDGGV---VPAKLEGT------SMK 510
Query: 325 DSVQFAEDIAESGR---IFVRNLSYTVTEDDLTKLFE---KYGPLAEVIL---PIDKETD 375
D + ++ A S R +FV+NL++ T+ L K FE K G L + P
Sbjct: 511 DQLVANDEGAASTRSSTVFVKNLNFKTTDASLRKHFEGRVKAGSLRTATVKRKPSKTGAS 570
Query: 376 KTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKL 435
+ GF V F + A + + + G+V G L L P + ++E K+
Sbjct: 571 LSMGFGFVEFDSADTAERVCKEMQGSVLDGHALVLQPSRAGDDE-----------KPSKV 619
Query: 436 DAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP-----YGITGLVEF 490
DA S ++V+N+ + DLK LF PFG + +V +P + VEF
Sbjct: 620 DAKG------SSSKLIVRNVAFEATRKDLKQLFSPFGQVKKVKLPKKFDGNHRGFAFVEF 673
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEG 521
+ K +A+ AF +L + L LEWA EG
Sbjct: 674 VTKQEAQNAFEALGSSHLYGRHLVLEWAREG 704
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ VRN+++ T DL +LF +G + +V LP K +GFA V F+ + A A+
Sbjct: 625 SSKLIVRNVAFEATRKDLKQLFSPFGQVKKVKLP-KKFDGNHRGFAFVEFVTKQEAQNAF 683
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
+ L + GR HL+ +E E + E ++ A +QV ++
Sbjct: 684 EALGSSHLYGR--HLVLEWAREGE---------TLDELRIKAASQVAPSK 722
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+ +KNL T+D +R HF G + V R +D K S +GFV FY++E
Sbjct: 7 VCVKNLPTYVTDDKLREHFGAKGQVTDAKVMRTRDGK------SRRFGFVGFYSQEEAES 60
Query: 643 ALKVLQNSSLDEHQI--ELKRS 662
A+ S LD ++ E+ RS
Sbjct: 61 AVAYFNRSFLDTSRLVCEVARS 82
>gi|336387594|gb|EGO28739.1| hypothetical protein SERLADRAFT_459485 [Serpula lacrymans var.
lacrymans S7.9]
Length = 780
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 230/817 (28%), Positives = 372/817 (45%), Gaps = 139/817 (17%)
Query: 29 ITQEQLKAKFEEKG----TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
+T +L+ FE+KG T+TD+++ + +G RRF F+G+ + +A A D+F+ T++
Sbjct: 13 VTPARLRQHFEQKGAPGGTITDIKVSFKPDGTSRRFGFVGFKTDKEASTAKDWFDRTFID 72
Query: 85 SSRIKVEKCSNLGDTTKPKSWSKYAPDSSA--YQKLHNIAPKQDLKPEHTKDSKPGKKSK 142
S+RI V D P+ + DSS + + P Q T S P K+ K
Sbjct: 73 STRINVVVVEASKDAPTPRPNKRRRMDSSKDDHPDIRESKPIQ--SKNETAASNPVKE-K 129
Query: 143 NDPTFSDFLQLHGKDVSKLLPLSNKDGEEKE--------------EENEDESNNQIAHAD 188
+DP +F+++ K +N+ + + EEN E +
Sbjct: 130 SDPNLDEFMKVMQPRTKKGPSWANEASQHNQALLPPVVDVTPVPVEENNQEGDEGKNDEG 189
Query: 189 ISDMEYLKLKTKSKD----------------------TAPSDPSVPPVSKAPVHKRQYHT 226
ISD++++K + K A + ++P K P + T
Sbjct: 190 ISDLDWMKRRMTQKMDNINLQERVFQQSDDEDEDRDMNAENQTAIPEEEKDPTKETILQT 249
Query: 227 --IVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNC---NK 273
+ ++NL +L F+P +PL G+AY+ F + +
Sbjct: 250 SRLFLRNLAFSCTDSELMELFQPFGEISQVHIPLDPRTKQPKGLAYVTFSESSAALAAYE 309
Query: 274 ALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI 333
AL+K KSF +G+ L+I + G D + K K K ++D A+
Sbjct: 310 ALDK-KSF-QGRLLHILP-----AVTRKGKIQDEDQEG----KKKSLKGEKD----AKRK 354
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A +GR F ++ Y ++ ++ + ++ IL + E+D A+ L H Q
Sbjct: 355 ASAGREFNWSMLYMNSDAVVSSVADRMNIAKSDIL--NPESDNA---AVKLALAETHIIQ 409
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ T F E++G V L +F+ +ARS ILVK
Sbjct: 410 ETK----TYF-------------ESQGVV------------LSSFSS--KARSDTTILVK 438
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
N+PY T ++ +FEP G L RVL+PP G +VEF ++A AF ++AY + +
Sbjct: 439 NIPYGTTAEQIREMFEPHGQLSRVLLPPAGTMAVVEFAHPDEASKAFRAVAYRRLGNSVV 498
Query: 514 YLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEK-KENTAEEDNQQGVPEVEENVEED 572
YLE P G+F + + NE G+ K T E G + D
Sbjct: 499 YLEKGPLGMFQDT--------GDTNEPTGQPKISTSFKPVTISEQEADG-------PDGD 543
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP------GQFLS 626
+E +TL++KN++F++T D + F+ A V K DPK P LS
Sbjct: 544 DEPSLSAGSTLFVKNISFSTTSDRFTQVFRNLPSFAFARVQTKPDPKRPAVPGVEAPRLS 603
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGS 686
MGYGFV F T ++ +ALK +Q LD H + +K + R E + K K+ K +
Sbjct: 604 MGYGFVGFKTADAAQKALKSMQGFVLDGHALHVKFAGRGAEEDEGKDKGKT----KSNTT 659
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
K++V+N+PF+A + ++ ELF A G+LK VRLPKK RGF F+EF+T++EA+ A
Sbjct: 660 KMIVKNMPFEATKKDIRELFGAHGQLKSVRLPKKF--DSRSRGFAFLEFVTRHEAENAY- 716
Query: 747 ALCQSTHLYGRRLVLEWAEEAD-NVEDIRKRTNRYFG 782
A+ + THL GR LVL+WAEE + +++ +RK+ +G
Sbjct: 717 AMLRHTHLLGRHLVLQWAEEGEQDLDVLRKKVGVGYG 753
>gi|308491929|ref|XP_003108155.1| CRE-RBD-1 protein [Caenorhabditis remanei]
gi|308249003|gb|EFO92955.1| CRE-RBD-1 protein [Caenorhabditis remanei]
Length = 888
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 216/385 (56%), Gaps = 39/385 (10%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYG-ITGLVEFLQ 492
KLDAF++ E RS +++ KNLP +LK +FE FGD +VL+P G ++ LV
Sbjct: 479 KLDAFSKPAEKRSDTVMIAKNLPSGVETEELKRMFEKFGDCQKVLMPAEGGVSALVIMGN 538
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFA------EAKEKSKGKEKEKNEEEGEEGE 546
AK AF +LAY++F+ PLYLEWAP V E EK+ K K + E
Sbjct: 539 PVDAKKAFRALAYSRFRSQPLYLEWAPFDVMGATVPSTETSEKTDDSTKPKKSKREMTYE 598
Query: 547 EEKKENTAEEDNQQGV------------------------PEVEENV---EEDEEREPEP 579
E+KKE ++ QQG+ PE E + E+E E
Sbjct: 599 EKKKER---KNRQQGITEEEEEKVEKKSDEEEVEVPEDKKPESSETKPKKSKQPEKEIES 655
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKK--CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
+T+++KNL F++T+ + F+K + S +++K +P P + LSMG+GFVQFYT
Sbjct: 656 GSTIFVKNLAFDTTDYGLETLFRKRYGDLLKSAQISKKLNPAEPTKPLSMGFGFVQFYTA 715
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
ALK +Q LD H +ELK S+R + + ++ + +K+LVRN+PF+A
Sbjct: 716 FDAKTALKEMQGELLDGHSLELKISHREVVDKGALKRKDVQKKDQGECTKLLVRNLPFEA 775
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
EVE LF+ FG +K +R+P+K HRGFGFV+FI+ +EA+RA AL STHLYGR
Sbjct: 776 SIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISADEARRAFDALVHSTHLYGR 835
Query: 758 RLVLEWAEEADNVEDIRKRTNRYFG 782
RLVLEWA+E + VE++R++T F
Sbjct: 836 RLVLEWAKEDETVEELREKTAEKFA 860
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 199/396 (50%), Gaps = 45/396 (11%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
T++QL+ FE+ G ++D LKYT EGKFR FAF+G+ E A A+ N T+ S R+
Sbjct: 14 CTEQQLRKFFEKYGKISDASLKYTKEGKFRGFAFVGFLDEGSASNAIAKSNQTFFNSKRL 73
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSK--PGKKSKNDPT 146
VE+C GD KP++WSKYA DSSAY++ H + KP + DS+ KK KNDP
Sbjct: 74 TVEECRPFGDANKPRAWSKYAKDSSAYKRAH--GDDGNGKPGRSDDSEEPSAKKQKNDPK 131
Query: 147 FSDFLQLHGKDVSKLLPLS-NKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTA 205
FL+ G V K + LS +K E K KL + D
Sbjct: 132 LDQFLEAKGVAVEKEVKLSKDKSAEAK-----------------------KLMAELMDGI 168
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASV---RTTFLGMAY 262
D S+ +++ LP+ K K++K + P+ + ++ R + A+
Sbjct: 169 QGDTSL--------------SLIFSGLPSSAKGKNIKEWLNPIRVKAMKIARNEDVAAAF 214
Query: 263 IGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKS 322
+ F + +AL K+ F G ++ I K + ++E A+
Sbjct: 215 VTFNRPPDVRRALQKDGQFLGGFKIGIEKVPGFLFKILQIETPEPEKETVEEHGAEFESR 274
Query: 323 QEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFAL 382
+++ E I E+GR+F+RNL Y EDDL LF+KYG ++EV + IDK+T KGFA+
Sbjct: 275 EKEEESVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGSCKGFAI 334
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
V F+ PE A AY LDG VF GRM+H+I G K +
Sbjct: 335 VEFVFPEAAVAAYSALDGYVFKGRMMHIIAGDEKRD 370
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 135/618 (21%), Positives = 243/618 (39%), Gaps = 138/618 (22%)
Query: 227 IVVKNLPAGVKKKDLKAYFK---PLPLASVRTT----FLGMAYIGFKDEKNCNKALNK-N 278
++VKNLP+ ++ L+ +F+ + AS++ T F G A++GF DE + + A+ K N
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGKISDASLKYTKEGKFRGFAFVGFLDEGSASNAIAKSN 64
Query: 279 KSFWKGKQLNI---------------YKYSKDNSAKYSGAADDNNNA-----SMENIKAK 318
++F+ K+L + KY+KD+SA DD N E AK
Sbjct: 65 QTFFNSKRLTVEECRPFGDANKPRAWSKYAKDSSAYKRAHGDDGNGKPGRSDDSEEPSAK 124
Query: 319 HWKSQEDSVQFAE---------------DIAESGRIFVRNLSYTVTEDDLTKLF------ 357
K+ QF E AE+ ++ + + L+ +F
Sbjct: 125 KQKNDPKLDQFLEAKGVAVEKEVKLSKDKSAEAKKLMAELMDGIQGDTSLSLIFSGLPSS 184
Query: 358 -------EKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTV-------- 402
E P+ + I + D F VTF P +A Q DG
Sbjct: 185 AKGKNIKEWLNPIRVKAMKIARNEDVAAAF--VTFNRPPDVRRALQK-DGQFLGGFKIGI 241
Query: 403 -----FLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
FL ++L + +P++ G + + +++E + R+ L +NLPY
Sbjct: 242 EKVPGFLFKILQIETPEPEKETVEEHGAEFESREKEEESVREKILE--TGRLFL-RNLPY 298
Query: 458 RTLPTDLKALFEPFGDLGRVLVPPYGITG------LVEFLQKNQAKAAFNSLAYTKFKEV 511
T DL+ LF+ +G++ V V TG +VEF+ A AA+++L FK
Sbjct: 299 ATKEDDLQFLFKKYGEVSEVQVVIDKKTGSCKGFAIVEFVFPEAAVAAYSALDGYVFKGR 358
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
+++ E +++K EE E + +N + +++ + E+
Sbjct: 359 MMHIIAGDE-------------KRDKPTEEDAETVPDDPDNPMKATDKKEKKKKTFKEEK 405
Query: 572 DEEREPEPDTTLYIKN---LNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
++++ + T + N L N+ D++ + +K D + Q S G
Sbjct: 406 QDQKKADAGKTAHSWNALFLGANAIADTLAQRLN----------VKKSDLLTSDQGESAG 455
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKI 688
TR L+N ++L ++ E + TV +
Sbjct: 456 VRLALAETRLVRETRDFFLENG------VKLDAFSKPAEKRSDTV--------------M 495
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN--EAKRAMK 746
+ +N+P + E++ +F+ FG+ + V +P + S L I N +AK+A +
Sbjct: 496 IAKNLPSGVETEELKRMFEKFGDCQKVLMPAEGGVSAL--------VIMGNPVDAKKAFR 547
Query: 747 ALCQSTHLYGRRLVLEWA 764
AL S + L LEWA
Sbjct: 548 ALAYS-RFRSQPLYLEWA 564
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 326 SVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEK-YGPL------AEVILPIDKETDKTK 378
S Q ++I IFV+NL++ T+ L LF K YG L ++ + P + +
Sbjct: 646 SKQPEKEIESGSTIFVKNLAFDTTDYGLETLFRKRYGDLLKSAQISKKLNPAEPTKPLSM 705
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLDA 437
GF V F A A + + G + G L L I + ++G + + +
Sbjct: 706 GFGFVQFYTAFDAKTALKEMQGELLDGHSLELKISHREVVDKG--------ALKRKDVQK 757
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEF 490
+Q + +LV+NLP+ +++ LFE FG + + +P + G V+F
Sbjct: 758 KDQGECTK----LLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDF 813
Query: 491 LQKNQAKAAFNSLAY-TKFKEVPLYLEWAPE 520
+ ++A+ AF++L + T L LEWA E
Sbjct: 814 ISADEARRAFDALVHSTHLYGRRLVLEWAKE 844
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+ V+NL T TE L K FEKYG +++ L KE K +GFA V FL A+ A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGKISDASLKYTKE-GKFRGFAFVGFLDEGSASNAIAK 62
Query: 398 LDGTVFLGRMLHLIPGKP 415
+ T F + L + +P
Sbjct: 63 SNQTFFNSKRLTVEECRP 80
>gi|320168309|gb|EFW45208.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 1179
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 222/392 (56%), Gaps = 28/392 (7%)
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
HLDG V G EGN + +++KL+ + RS+ +ILVKN+P
Sbjct: 785 HLDGKV---------NGVDAAGEGN---RGVLTSAQKKLE------QERSRTVILVKNIP 826
Query: 457 YRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLE 516
+ +L+ LF G+L R +P +VEF Q ++A++AF +LAY+KFK+VP+YLE
Sbjct: 827 FSATEDELRPLFAKHGELKRFALPSTRALAVVEFAQPSEARSAFRNLAYSKFKQVPIYLE 886
Query: 517 WAPEGVFAEAKEKSKGKEKEKN----EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEED 572
WAP A K+ + + + E + + A+ V
Sbjct: 887 WAPVSTVLSAPTKAAAQTTTDSTAPMQVEAAPSAKAALKAAAKAKADAAAAAAAARVVSH 946
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
P TL++KNLNF++++ S++ F + P+ + TVARK+D PG+ LSMGYGFV
Sbjct: 947 TSSGPGEQRTLFVKNLNFDTSDASLKDFFAQVAPVVTATVARKRDMARPGEHLSMGYGFV 1006
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT---GSKIL 689
+ +RE + LK LQ L++H +ELK S R + T KR +++ A+ +K++
Sbjct: 1007 ELQSREQALECLKRLQGKELEDHALELKLSERVSAAPVTRSKRSAASAAEAEVPESTKLI 1066
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
VRN+PF+A + E+ ++F FG+LK VRLP+K G HRGF F+EF+TK EAK+A ++L
Sbjct: 1067 VRNVPFEATRKELFDVFSPFGQLKSVRLPQK--PGGQHRGFAFIEFLTKEEAKKAFESL- 1123
Query: 750 QSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
++TH YGR LVLEWA E +VE +R++T F
Sbjct: 1124 KATHFYGRHLVLEWAAEDASVEQMREKTAARF 1155
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 138/278 (49%), Gaps = 39/278 (14%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
IAESGR+FVRNL YT TEDDL LF K+G LAEV +PIDKET K GFA V FLMPEHA
Sbjct: 603 IAESGRLFVRNLPYTCTEDDLIALFSKFGQLAEVHMPIDKETKKPTGFAFVLFLMPEHAV 662
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
A++ LDG+ F GR+LHL+P K +E + D + DA + R ++ +
Sbjct: 663 TAFRALDGSTFQGRLLHLLPAKANASE-DEDADMSASKPREGEDA----SDYRKRKQQRL 717
Query: 453 KNLPYRTLPTDL--KALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKE 510
K+ T+ D LF + + YGI+ + L +
Sbjct: 718 KS----TISADFNWNTLFIGNNTVADAISSKYGISK--------------SDLLDPEAAS 759
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEE-KKENTAEEDNQQGVPEVEENV 569
+P+ + A + +E K EE+G + + + A E N+ + ++ +
Sbjct: 760 LPVRMALAETQILSETKTFL--------EEQGIHLDGKVNGVDAAGEGNRGVLTSAQKKL 811
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPI 607
E++ R T + +KN+ F++TED +R F K G +
Sbjct: 812 EQERSR-----TVILVKNIPFSATEDELRPLFAKHGEL 844
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TDV+L T +G FRRF FIG+ AQAA YF+ T++ +SRI+V +GD P+
Sbjct: 288 ITDVKLAKTEDGLFRRFGFIGFKTPQAAQAAEAYFHRTFIDTSRIEVYPAKAIGDADIPR 347
Query: 104 SWSKYAPDSSAYQK 117
WS+Y+ SSA+++
Sbjct: 348 PWSRYSAGSSAFER 361
>gi|302818104|ref|XP_002990726.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
gi|300141464|gb|EFJ08175.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
Length = 738
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/333 (41%), Positives = 203/333 (60%), Gaps = 29/333 (8%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS R+ILVKNLP+ T DL +F P+G LGR+++PP +VEFL+ ++A+ AF SLA
Sbjct: 413 RSSRVILVKNLPFSTTEADLFGVFCPYGSLGRLVLPPTKTVAIVEFLESSEARKAFESLA 472
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y KFK VPLYLEWAP+ + +E K+ K EG K + A ++
Sbjct: 473 YRKFKHVPLYLEWAPQDLLSEKKDGGVVPAK-------LEGTSIKDQLVANDEGAASTRL 525
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKKDPKSP 621
+E P +T+++KNLNF +T+ S+R+HF+ K G + + TV RK P
Sbjct: 526 IEIR--------PWQSSTVFVKNLNFKTTDASLRKHFEGRVKAGSLRTATVKRK--PSKT 575
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
G LSMG+GFV+F + ++ + K +Q S LD H + L+ S + + + V A
Sbjct: 576 GASLSMGFGFVEFDSTDTAERVCKEMQGSVLDGHALVLQPSRAGDDEKPSKVD------A 629
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ + SK++VRN+ F+A + +++ LF FG++K V+LPKK G+ HRGF FVEF+TK EA
Sbjct: 630 RGSSSKLIVRNVAFEATRKDLKLLFSPFGQVKKVKLPKKFDGN--HRGFAFVEFVTKQEA 687
Query: 742 KRAMKALCQSTHLYGRRLVLEWAEEADNVEDIR 774
+ A +AL S+HLYGR LVLEWA E + ++++R
Sbjct: 688 QNAFEALG-SSHLYGRHLVLEWAREGETLDELR 719
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
Query: 330 AEDIAES--GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
A+D+AE+ GR+FVRNL+YT +E++L LF +YG + +V + DKET+++KG+ V F++
Sbjct: 216 AQDVAETDTGRLFVRNLAYTTSEEELVSLFGQYGEVVQVHVICDKETNRSKGYGYVGFML 275
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
PE AT+A LD ++F GR+LH++P K + ++
Sbjct: 276 PEEATRAMTELDNSIFQGRLLHVLPAKQQTSQ 307
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 101/180 (56%), Gaps = 6/180 (3%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T ++LK F KG VTD ++ T EGK RRF F+G++ +++A++A+ YFN +++ +SR+
Sbjct: 16 VTDDKLKEHFGAKGQVTDAKVMRTREGKSRRFGFVGFYSQEEAESAVAYFNRSFLDTSRL 75
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
E ++GD + WS+++ SSAY+K H K LKP+ T + + DP
Sbjct: 76 VCEVARSVGDAA-VRPWSRHSKGSSAYEKTHAPEEKAQLKPKKTVSVD--RDQEQDPGLD 132
Query: 149 DFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPSD 208
+FL + + +K +N D + + ++++ +SD+ YLK K + + + SD
Sbjct: 133 EFLSVM-QPRTKTKVWANDDAKLTTQHPSSKASDDT--GPVSDLHYLKSKVRQQWSDDSD 189
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 135/336 (40%), Gaps = 72/336 (21%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKP------LPLASVRTTFLGMAYIGFKDEKNCNKAL 275
R I+VKNLP + DL F P L L +T +A + F + KA
Sbjct: 413 RSSRVILVKNLPFSTTEADLFGVFCPYGSLGRLVLPPTKT----VAIVEFLESSEARKAF 468
Query: 276 NKNKSFWKGKQLNIY---------KYSKDNS---AKYSG-------AADDNNNASMENIK 316
++ ++ K K + +Y KD AK G A+D AS I+
Sbjct: 469 -ESLAYRKFKHVPLYLEWAPQDLLSEKKDGGVVPAKLEGTSIKDQLVANDEGAASTRLIE 527
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFE---KYGPLAEVIL---PI 370
+ W +S +FV+NL++ T+ L K FE K G L + P
Sbjct: 528 IRPW--------------QSSTVFVKNLNFKTTDASLRKHFEGRVKAGSLRTATVKRKPS 573
Query: 371 DKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCI 430
+ GF V F + A + + + G+V G L L P + ++E
Sbjct: 574 KTGASLSMGFGFVEFDSTDTAERVCKEMQGSVLDGHALVLQPSRAGDDE----------- 622
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP-----YGIT 485
K+DA S ++V+N+ + DLK LF PFG + +V +P +
Sbjct: 623 KPSKVDARG------SSSKLIVRNVAFEATRKDLKLLFSPFGQVKKVKLPKKFDGNHRGF 676
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEG 521
VEF+ K +A+ AF +L + L LEWA EG
Sbjct: 677 AFVEFVTKQEAQNAFEALGSSHLYGRHLVLEWAREG 712
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+ +KNL T+D ++ HF G + V R ++ K S +GFV FY++E
Sbjct: 7 VCVKNLPAYVTDDKLKEHFGAKGQVTDAKVMRTREGK------SRRFGFVGFYSQEEAES 60
Query: 643 ALKVLQNSSLDEHQI--ELKRS 662
A+ S LD ++ E+ RS
Sbjct: 61 AVAYFNRSFLDTSRLVCEVARS 82
>gi|336364271|gb|EGN92632.1| hypothetical protein SERLA73DRAFT_190814 [Serpula lacrymans var.
lacrymans S7.3]
Length = 780
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 225/815 (27%), Positives = 367/815 (45%), Gaps = 135/815 (16%)
Query: 29 ITQEQLKAKFEEKG----TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
+T +L+ FE+KG T+TD+++ + +G RRF F+G+ + +A A D+F+ T++
Sbjct: 13 VTPARLRQHFEQKGAPGGTITDIKVSFKPDGTSRRFGFVGFKTDKEASTAKDWFDRTFID 72
Query: 85 SSRIKVEKCSNLGDTTKPKSWSKYAPDSSA--YQKLHNIAPKQDLKPEHTKDSKPGKKSK 142
S+RI V D P+ + DSS + + P Q T S P K+ K
Sbjct: 73 STRINVVVVEASKDAPTPRPNKRRRMDSSKDDHPDIRESKPIQ--SKNETAASNPVKE-K 129
Query: 143 NDPTFSDFLQLHGKDVSKLLPLSNKDGEEKE--------------EENEDESNNQIAHAD 188
+DP +F+++ K +N+ + + EEN E +
Sbjct: 130 SDPNLDEFMKVMQPRTKKGPSWANEASQHNQALLPPVVDVTPVPVEENNQEGDEGKNDEG 189
Query: 189 ISDMEYLKLKTKSKD----------------------TAPSDPSVPPVSKAPVHKRQYHT 226
ISD++++K + K A + ++P K P + T
Sbjct: 190 ISDLDWMKRRMTQKMDNINLQERVFQQSDDEDEDRDMNAENQTAIPEEEKDPTKETILQT 249
Query: 227 --IVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCNKALN 276
+ ++NL +L F+P +PL G+AY+ F + A
Sbjct: 250 SRLFLRNLAFSCTDSELMELFQPFGEISQVHIPLDPRTKQPKGLAYVTFSESSAALAAYE 309
Query: 277 K-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
+K ++G+ L+I + G D + K K K ++D A+ A
Sbjct: 310 ALDKKSFQGRLLHILP-----AVTRKGKIQDEDQEG----KKKSLKGEKD----AKRKAS 356
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+GR F ++ Y ++ ++ + ++ IL + E+D A+ L H Q
Sbjct: 357 AGREFNWSMLYMNSDAVVSSVADRMNIAKSDIL--NPESDNA---AVKLALAETHIIQET 411
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ T F E++G V L +F+ +ARS ILVKN+
Sbjct: 412 K----TYF-------------ESQGVV------------LSSFSS--KARSDTTILVKNI 440
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYL 515
PY T ++ +FEP G L RVL+PP G +VEF ++A AF ++AY + +YL
Sbjct: 441 PYGTTAEQIREMFEPHGQLSRVLLPPAGTMAVVEFAHPDEASKAFRAVAYRRLGNSVVYL 500
Query: 516 EWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEK-KENTAEEDNQQGVPEVEENVEEDEE 574
E P G+F + + NE G+ K T E G + D+E
Sbjct: 501 EKGPLGMFQDT--------GDTNEPTGQPKISTSFKPVTISEQEADG-------PDGDDE 545
Query: 575 REPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP------GQFLSMG 628
+TL++KN++F++T D + F+ A V K DPK P LSMG
Sbjct: 546 PSLSAGSTLFVKNISFSTTSDRFTQVFRNLPSFAFARVQTKPDPKRPAVPGVEAPRLSMG 605
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKI 688
YGFV F T ++ +ALK +Q LD H + +K + R E + K K+ K +K+
Sbjct: 606 YGFVGFKTADAAQKALKSMQGFVLDGHALHVKFAGRGAEEDEGKDKGKT----KSNTTKM 661
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+V+N+PF+A + ++ ELF A G+LK VRLPKK RGF F+EF+T++EA+ A A+
Sbjct: 662 IVKNMPFEATKKDIRELFGAHGQLKSVRLPKKF--DSRSRGFAFLEFVTRHEAENAY-AM 718
Query: 749 CQSTHLYGRRLVLEWAEEAD-NVEDIRKRTNRYFG 782
+ HL GR LVL+WAEE + +++ +RK+ +G
Sbjct: 719 LRHIHLLGRHLVLQWAEEGEQDLDVLRKKVGVGYG 753
>gi|268537328|ref|XP_002633800.1| C. briggsae CBR-RBD-1 protein [Caenorhabditis briggsae]
Length = 877
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 155/383 (40%), Positives = 222/383 (57%), Gaps = 40/383 (10%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYG-ITGLVEFLQ 492
KLDAF++ E RS ++L KNLP +L+ +FE FGD +VL+P G ++ LV
Sbjct: 471 KLDAFSKPAEKRSDTVMLAKNLPAGVETEELQRMFEKFGDCQKVLMPSEGGVSALVIMGN 530
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEK-------SKGKEKEKNEEEGEEG 545
AK AF +LAY++F+ PLYLEWAP V ++ S+ K K +
Sbjct: 531 PVDAKKAFRALAYSRFRSQPLYLEWAPYDVMGATEQPKEEEQEKSEDYTKPKKSKREMTY 590
Query: 546 EEEKKENTAEEDNQQGVPEVEEN--VEEDEEREP---------------------EPDTT 582
EE+KKE ++ QQG+ E EE+ ++EDE E E +
Sbjct: 591 EEKKKER---KNRQQGITETEEDKKLDEDEVEETKESEPVEKKKKKEKKQPEREIESGSA 647
Query: 583 LYIKNLNFNSTEDSIRRHFKK--CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+++KNL F++T+D + F+K + + +++K +P P + LSMG+GFVQFYT
Sbjct: 648 IFVKNLAFDTTDDGLGSLFRKRYGDLVKNAQISKKLNPAEPTKPLSMGFGFVQFYTALDA 707
Query: 641 NQALKVLQNSSLDEHQIELKRSNR-NLESEATTVKRKSSNVAKQT-GSKILVRNIPFQAK 698
ALK +Q LD H +ELK S+R N++ A +KRK +Q +K+LVRN+PF+A
Sbjct: 708 KNALKEMQGELLDGHSLELKISHRENVDKGA--LKRKDVKQKEQGECTKLLVRNLPFEAS 765
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
EVE LF+ FG K +R+P+K HRGFGFVEFI+ +EA RA +L STHLYGRR
Sbjct: 766 IKEVETLFETFGAAKSIRIPRKPGQKLQHRGFGFVEFISTDEAFRAFDSLVHSTHLYGRR 825
Query: 759 LVLEWAEEADNVEDIRKRTNRYF 781
LVLEWA+E + VE++R++T F
Sbjct: 826 LVLEWAKEDETVEELREKTAEKF 848
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 203/394 (51%), Gaps = 51/394 (12%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
T++QL+ FE+ G ++D LKYT EGKFR FAF+G+ E A A+ N T+ S R+
Sbjct: 14 CTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDESSASNAMAKSNQTFFNSKRL 73
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
VE+C GD KP++WSKYA DSSAY++ H + + H KK KND F
Sbjct: 74 TVEECRPFGDANKPRAWSKYAKDSSAYKRAHGEEGTSEPRQSHGTGEPEAKKQKNDEKFD 133
Query: 149 DFLQLHGKDVSKLLPLS-NKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPS 207
F++ G V K + LS +K E K KL + +
Sbjct: 134 QFMEAKGVTVEKEVKLSKDKSAEAK-----------------------KLMKELMEGVEG 170
Query: 208 DPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASV---RTTFLGMAYIG 264
D S+ +++ LP+ K K++K + P+ + ++ R + A++
Sbjct: 171 DTSL--------------SLIFSGLPSSAKGKNIKEWLNPIRVKAMKIARNDDVAAAFVS 216
Query: 265 FKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE 324
F + +AL K+ F G ++ I K +A+ + + AS+E+ +E
Sbjct: 217 FNRPPDVRRALQKDGQFLGGFKIAIEKI---ETAEPEKEHVEEHGASLES-----RDKEE 268
Query: 325 DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVT 384
+SV+ E I E+GR+F+RNL Y EDDL LF+KYG ++EV + IDK+T KGFA+V
Sbjct: 269 ESVR--EKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVIIDKKTGSCKGFAIVE 326
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
F+ PE A AY LDG VF GRM+H++PG K +
Sbjct: 327 FVFPEAAVAAYSALDGYVFKGRMMHILPGDEKRD 360
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 29/203 (14%)
Query: 335 ESGR-IFVRNLSYTVTEDDLTKLFEK-YGPL------AEVILPIDKETDKTKGFALVTFL 386
ESG IFV+NL++ T+D L LF K YG L ++ + P + + GF V F
Sbjct: 643 ESGSAIFVKNLAFDTTDDGLGSLFRKRYGDLVKNAQISKKLNPAEPTKPLSMGFGFVQFY 702
Query: 387 MPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
A A + + G + G L L I + ++G + K Q +
Sbjct: 703 TALDAKNALKEMQGELLDGHSLELKISHRENVDKGAL-----------KRKDVKQKEQGE 751
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKA 498
+ +LV+NLP+ +++ LFE FG + +P + G VEF+ ++A
Sbjct: 752 CTK-LLVRNLPFEASIKEVETLFETFGAAKSIRIPRKPGQKLQHRGFGFVEFISTDEAFR 810
Query: 499 AFNSLAY-TKFKEVPLYLEWAPE 520
AF+SL + T L LEWA E
Sbjct: 811 AFDSLVHSTHLYGRRLVLEWAKE 833
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 151/356 (42%), Gaps = 75/356 (21%)
Query: 227 IVVKNLPAGVKKKDLKAYFK---PLPLASVRTT----FLGMAYIGFKDEKNCNKALNK-N 278
++VKNLP+ ++ L+ +F+ + AS++ T F G A++GF DE + + A+ K N
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDESSASNAMAKSN 64
Query: 279 KSFWKGKQLNI---------------YKYSKDNSA-----KYSGAADDNNNASMENIKAK 318
++F+ K+L + KY+KD+SA G ++ + +AK
Sbjct: 65 QTFFNSKRLTVEECRPFGDANKPRAWSKYAKDSSAYKRAHGEEGTSEPRQSHGTGEPEAK 124
Query: 319 HWKSQEDSVQFAE--------------DIAESGRIFVRNLSYTVTED-DLTKLF------ 357
K+ E QF E D + + ++ L V D L+ +F
Sbjct: 125 KQKNDEKFDQFMEAKGVTVEKEVKLSKDKSAEAKKLMKELMEGVEGDTSLSLIFSGLPSS 184
Query: 358 -------EKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
E P+ + I + D F V+F P +A Q DG G + +
Sbjct: 185 AKGKNIKEWLNPIRVKAMKIARNDDVAAAF--VSFNRPPDVRRALQK-DGQFLGGFKIAI 241
Query: 411 IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-----ILVKNLPYRTLPTDLK 465
+ E E K H L++ ++ E+ ++I + ++NLPY T DL+
Sbjct: 242 EKIETAEPE-----KEHVEEHGASLESRDKEEESVREKILETGRLFLRNLPYATKEDDLQ 296
Query: 466 ALFEPFGDLGRVLVPPYGITG------LVEFLQKNQAKAAFNSLAYTKFKEVPLYL 515
LF+ +G++ V V TG +VEF+ A AA+++L FK +++
Sbjct: 297 FLFKKYGEVSEVQVIIDKKTGSCKGFAIVEFVFPEAAVAAYSALDGYVFKGRMMHI 352
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+ V+NL T TE L K FEKYG +++ L KE K +GFA V FL A+ A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDESSASNAMAK 62
Query: 398 LDGTVFLGRMLHLIPGKP 415
+ T F + L + +P
Sbjct: 63 SNQTFFNSKRLTVEECRP 80
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
++++V+N+P + ++ + F+ +G++ L K G RGF FV F+ ++ A AM
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASL--KYTKEGKFRGFAFVGFLDESSASNAM 60
Query: 746 KALCQSTHLYGRRLVLE 762
A T +RL +E
Sbjct: 61 -AKSNQTFFNSKRLTVE 76
>gi|409042979|gb|EKM52462.1| hypothetical protein PHACADRAFT_126290 [Phanerochaete carnosa
HHB-10118-sp]
Length = 767
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 228/812 (28%), Positives = 363/812 (44%), Gaps = 140/812 (17%)
Query: 29 ITQEQLKAKFEEKG----TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
+TQ+QL+ FE KG +TDV++ +G RRF F+GY E +A+ A +F+ T++
Sbjct: 13 LTQQQLREHFESKGGPGGALTDVKVVLKPDGTSRRFGFVGYKTEVEAEKATKWFDRTFIH 72
Query: 85 SSRIKVEKCSNLGDTTKPK--SWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSK 142
SSRI V D P+ S+ S + + + K+ KP S G+
Sbjct: 73 SSRINVSVIEGAKDAPAPRPNKRSRLEGPPSEGKPVKDKVSKEKAKP-----STKGRGRD 127
Query: 143 N-DPTFSDFLQL-------HGKDVSKLLPLSNKDG----------EEKEEENEDESNNQI 184
N D +F+Q+ KDV + P ++ G +E+E+ S+ +
Sbjct: 128 NKDERLEEFMQVMQPRKGPSWKDVDTV-PSADAQGVASTSKVRMQGRSAKEDEEPSDADV 186
Query: 185 AHAD-ISDMEYLKLKTKSKDTAP---------SDPSVPPVSKAPVHKR----------QY 224
+ + SD+++LK K T SD + +S+ P +
Sbjct: 187 SGGEPASDVDWLKRHMKPSLTLSESADMVFDQSDTEMDQLSETPAKSSPEDEAKSTILRT 246
Query: 225 HTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKD-EKNCNKAL 275
+ ++NL + +L F+P +PL S+ T G+ Y+ F D EK
Sbjct: 247 GRLFLRNLAFTCTEDELLGLFQPFGEVSQTHIPLDSITKTSKGLGYVTFADPEKAVIAYE 306
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
+K ++G+ L++ A + ++E + K E + A+ A
Sbjct: 307 TLDKMSFQGRLLHVLP-----------AINRKGKVAVEEVGKKRTLKDE---REAKKKAI 352
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+G+ F + Y ++ ++ + ++ IL + E+D A+ L H Q
Sbjct: 353 AGKDFNWGMLYMNSDAVVSSVADRMNISKSDIL--NPESDNA---AVKLALAETHVIQET 407
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ FL +G V +S ++ ARS ILVKN+
Sbjct: 408 KS-----FL----------------ETNGVVLSSLSGPRV--------ARSDTTILVKNI 438
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYL 515
PY T ++ LFE G L RVLVPP G +VEF+ ++A+ AF ++AY + YL
Sbjct: 439 PYGTSADQIRELFEAHGKLRRVLVPPAGTMAVVEFVHSDEARKAFKTVAYRRMGNSITYL 498
Query: 516 EWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEER 575
E P G+F ++ + G + + V + + +
Sbjct: 499 EKGPVGMFVDSVPVANG--------------------SVTIASAAPVKIADTDAPSPNDP 538
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF---LSMGYGFV 632
P +TL++KNL F++ + F+ A V K DPK PG LSMGYGFV
Sbjct: 539 PPNAGSTLFVKNLAFSTASERFVAAFRHLPDFAFARVQTKPDPKKPGDAHARLSMGYGFV 598
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRN 692
F T E + LK +Q LD H + +K + R E E K + V +T +K++V+N
Sbjct: 599 GFKTAEGARKGLKAMQGYVLDGHALVVKFAGRGAEEE----KEDAGKVKSRT-TKMIVKN 653
Query: 693 IPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
+PF+A + ++ +LF A G+LK VRLPKK RGF F+EFIT++EA+ A AL + T
Sbjct: 654 VPFEATKKDIRDLFGAHGQLKSVRLPKKF--DHRSRGFAFLEFITRHEAENAYAAL-RHT 710
Query: 753 HLYGRRLVLEWAEEADNV--EDIRKRTNRYFG 782
HL GR LVLEWAEE +V E++RK+ FG
Sbjct: 711 HLLGRHLVLEWAEEDSSVDIEELRKKAGVGFG 742
>gi|157139408|ref|XP_001647574.1| RNA binding motif protein [Aedes aegypti]
gi|108865819|gb|EAT32242.1| AAEL015645-PA [Aedes aegypti]
Length = 263
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/228 (55%), Positives = 162/228 (71%), Gaps = 6/228 (2%)
Query: 562 VPE-VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
+PE VE +E + PE TTL++KNL+F + E+SIR F+ GPI SV V R+KD
Sbjct: 1 MPEPVEPEKDEYSDLSPEEGTTLFLKNLSFQTNEESIRETFRNMGPIHSVQVVRRKDG-- 58
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNV 680
G+ S GYGF+QF R+S + ALK LQ+ +D ++EL RS+R L +EA T RK+S +
Sbjct: 59 -GKNESRGYGFIQFKFRKSADSALKNLQSVHIDGRKVELSRSDRTLNTEADTHGRKASKL 117
Query: 681 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITK 738
KQTG+KILVRN+PFQA E+ +LFK FGELK VRLP+KMV S HRGF FV+F+T+
Sbjct: 118 KKQTGTKILVRNVPFQANAKEIRDLFKVFGELKSVRLPRKMVSSADESHRGFCFVDFVTE 177
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTAVG 786
N+AK+A +ALCQSTHLYGRRLVLEWAE D VE++RKRT F G
Sbjct: 178 NDAKQAFEALCQSTHLYGRRLVLEWAEADDGVEELRKRTAEKFAGTSG 225
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDKTKGFALVTFLMPEHAT 392
E +F++NLS+ E+ + + F GP+ +V+ D ++++G+ + F + A
Sbjct: 19 EGTTLFLKNLSFQTNEESIRETFRNMGPIHSVQVVRRKDGGKNESRGYGFIQFKFRKSAD 78
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
A ++L GR + L + N + H RK + + ILV
Sbjct: 79 SALKNLQSVHIDGRKVEL---SRSDRTLNTEADTHG----RKASKLKKQTGTK----ILV 127
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG---------LVEFLQKNQAKAAFNSL 503
+N+P++ +++ LF+ FG+L V +P ++ V+F+ +N AK AF +L
Sbjct: 128 RNVPFQANAKEIRDLFKVFGELKSVRLPRKMVSSADESHRGFCFVDFVTENDAKQAFEAL 187
Query: 504 AY-TKFKEVPLYLEWA 518
T L LEWA
Sbjct: 188 CQSTHLYGRRLVLEWA 203
>gi|299115735|emb|CBN74300.1| RNA binding protein [Ectocarpus siliculosus]
Length = 875
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 188/570 (32%), Positives = 281/570 (49%), Gaps = 75/570 (13%)
Query: 227 IVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCNKALNK- 277
+ V+NLP + DL+ F LP+ V+ G A++ F ++ KAL +
Sbjct: 335 LFVRNLPYTCTEDDLRDLFGSFGMLSEVHLPVDDVKKG-KGFAFVQFVIPEDAGKALEQL 393
Query: 278 NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG 337
++ + G+ L+I + S A+ + A K +K +++ + A +G
Sbjct: 394 DRHAFHGRLLHIIPARRQPG---SSGAEASGTAGSAATAGKSYKEKKE----MDRRARAG 446
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
N S+ ++ + L ++ G IL + E D AL L+ + + +
Sbjct: 447 DTVGWNASFVRSDTVVDALADRLGVGKSDILDRE-EGDMAVRLALGETLLVKENKEYF-- 503
Query: 398 LDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
E EG VD V + K + E RS +ILVKNLPY
Sbjct: 504 -------------------EKEG-VDLSV---LESTKGKGSGKGAEERSSTVILVKNLPY 540
Query: 458 RTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEW 517
+L F FGD+GRVL+PP LVEFL + AK AF LA +F+ V LYLEW
Sbjct: 541 SAEAAELAKRFGAFGDVGRVLLPPSKTVALVEFLAASDAKKAFKRLACARFQHVLLYLEW 600
Query: 518 APEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDE---E 574
AP F + E S E+ GEE K V+EDE
Sbjct: 601 APLKAFKDTFEPSSKPASLPASEKAATGEEAK-------------------VDEDEVAAG 641
Query: 575 REPEPDTTLYIKNLNFNSTEDSIRRHFKKCG-PIASVTVARKKDPKSPGQFLSMGYGFVQ 633
R + T+++KNL+F++TE +R F+K G + SV++ RKK P + LSMG+GFV+
Sbjct: 642 RASKEPLTMFVKNLSFSTTEAGLRTCFEKAGLQVRSVSIPRKKGPGASEATLSMGFGFVE 701
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNL----ESEATTVKRKSSNVAKQTGSKIL 689
++++LK LQ + LD H +ELKRS + L ++ +++ + K+T KI+
Sbjct: 702 CADASLVDKSLKTLQGTVLDGHALELKRSTKRLTPATKASSSSSSSSQGDSLKRT--KII 759
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
+RNIPFQA E+ EL +FG+LK VRLPKK G HRGF FV+F+T EA A K+L
Sbjct: 760 IRNIPFQATAKEIRELCSSFGQLKRVRLPKKFDGG--HRGFAFVDFLTAQEAMGAKKSL- 816
Query: 750 QSTHLYGRRLVLEWAEEADNVEDIRKRTNR 779
+STH YGR LV EWAE+ ++++ +R + R
Sbjct: 817 ESTHFYGRHLVGEWAEDGEDMDTLRAKAAR 846
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 65/105 (61%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++L F E+G V+D ++ T +GK R+FAF+G+ E A+ AL Y+N T++ +SRI
Sbjct: 26 VDEKRLWQHFAERGEVSDAKIVRTKDGKSRQFAFVGFTTESDAEEALKYYNQTFLDTSRI 85
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTK 133
+VE+ G+ + WSK++ SS QKL ++++K + K
Sbjct: 86 QVERAQPKGNAGIARPWSKHSEGSSRAQKLAEAKARKEVKAKDKK 130
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 574 EREPE-PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
E+E E P T L +KN+ + E + +HF + G ++ + R KD K S + FV
Sbjct: 7 EKEMEAPKTRLIVKNVPKHVDEKRLWQHFAERGEVSDAKIVRTKDGK------SRQFAFV 60
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIELKRS 662
F T +ALK + LD +I+++R+
Sbjct: 61 GFTTESDAEEALKYYNQTFLDTSRIQVERA 90
>gi|17542530|ref|NP_502432.1| Protein RBD-1 [Caenorhabditis elegans]
gi|3880097|emb|CAB05631.1| Protein RBD-1 [Caenorhabditis elegans]
Length = 872
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/377 (40%), Positives = 218/377 (57%), Gaps = 29/377 (7%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYG-ITGLVEFLQ 492
KLDAF++ E RS ++L KNLP +L+ +FE FGD +VL+P G ++ LV
Sbjct: 469 KLDAFSKPAEKRSDTVMLAKNLPAGVESEELQRMFEKFGDCTKVLMPTEGGVSALVIMGN 528
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVF-----------AEAKEKSKGKEKEKNEEE 541
AK AF +LAY++F+ PLYLEWAP V AE +K K ++E EE
Sbjct: 529 PVDAKKAFRALAYSRFRSQPLYLEWAPYDVMGATAPPAEDKTAEVADKPKLSKREMTYEE 588
Query: 542 GEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREP-------------EPDTTLYIKNL 588
+ + +++ EE+ G EE ++ E E E +TL++KNL
Sbjct: 589 KRKERKNRQQGITEEEKDDGEVIEEEEKPKEVEAEDKKKSSKKQSEKEIESGSTLFVKNL 648
Query: 589 NFNSTEDSIRRHFKK--CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKV 646
F++T+ S+ F+K + S +++K +P P + LSMG+GFVQFYT ALK
Sbjct: 649 AFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFYTAFDAKTALKD 708
Query: 647 LQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT-GSKILVRNIPFQAKQSEVEEL 705
+Q LD H +ELK S+R ++ +KRK +Q +K+LVRN+PF+A EVE L
Sbjct: 709 MQGELLDGHSLELKISHRE-NADKGALKRKEVKQKEQGECTKLLVRNLPFEASVKEVETL 767
Query: 706 FKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE 765
F+ FG +K +R+PKK HRGFGFV+FI+ +EA RA +L STHLYGRRLVLEWA+
Sbjct: 768 FETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRAFDSLVHSTHLYGRRLVLEWAK 827
Query: 766 EADNVEDIRKRTNRYFG 782
+ + VE++R++T F
Sbjct: 828 DDETVEELREKTAEKFA 844
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 138/395 (34%), Positives = 207/395 (52%), Gaps = 57/395 (14%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
T++QL+ FE+ G ++D LKYT EGKFR FAF+G+ E A AL N T+ S ++
Sbjct: 14 CTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAKSNQTFFNSKKL 73
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKP---EHTKDSKPGKKSKNDP 145
VE+C GD KP++WSKYA DSSAY++ H K++ P + T++ P KK K+D
Sbjct: 74 TVEECRPFGDANKPRAWSKYAKDSSAYKRTH--GEKEEANPGKSDETEEPAP-KKQKDDA 130
Query: 146 TFSDFLQLHGKDVSKLLPLS-NKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDT 204
F FL+ G V K + LS +K E K KL + D
Sbjct: 131 KFDQFLEAKGVVVEKEVKLSKDKSAEAK-----------------------KLMAELMDG 167
Query: 205 APSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASV---RTTFLGMA 261
D S+ +++ LP+ K K++K + P+ + ++ R + A
Sbjct: 168 IGGDTSL--------------SLIFSGLPSSAKGKNIKEWLNPIRVKAMKIARNEDVAAA 213
Query: 262 YIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWK 321
++ F + +AL K+ F G ++ I K + + + + AS+E+
Sbjct: 214 FVTFNRPPDVRRALQKDGQFLGGFKIGIEKI---ETPEPEHEVIEEHGASLES-----RD 265
Query: 322 SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFA 381
+E++V+ E I E+GR+F+RNL Y EDDL LF+KYG ++EV + IDK+T KGFA
Sbjct: 266 KEEETVR--EKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFA 323
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
+V F+ PE A AY LDG VF GRM+H++PG K
Sbjct: 324 IVEFVFPEAAVAAYSALDGYVFKGRMMHILPGDEK 358
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 158/373 (42%), Gaps = 79/373 (21%)
Query: 227 IVVKNLPAGVKKKDLKAYFK---PLPLASVRTT----FLGMAYIGFKDEKNCNKALNK-N 278
++VKNLP+ ++ L+ +F+ + AS++ T F G A++GF DE + + AL K N
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAKSN 64
Query: 279 KSFWKGKQLNI---------------YKYSKDNSA--KYSGAADDNNNASMENIKAKHWK 321
++F+ K+L + KY+KD+SA + G ++ N + + K
Sbjct: 65 QTFFNSKKLTVEECRPFGDANKPRAWSKYAKDSSAYKRTHGEKEEANPGKSDETEEPAPK 124
Query: 322 SQEDSVQFAEDI------------------AESGRIFVRNLSYTVTEDDLTKLF------ 357
Q+D +F + + AE+ ++ + + L+ +F
Sbjct: 125 KQKDDAKFDQFLEAKGVVVEKEVKLSKDKSAEAKKLMAELMDGIGGDTSLSLIFSGLPSS 184
Query: 358 -------EKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
E P+ + I + D F VTF P +A Q DG G + +
Sbjct: 185 AKGKNIKEWLNPIRVKAMKIARNEDVAAAF--VTFNRPPDVRRALQK-DGQFLGGFKIGI 241
Query: 411 IPGKPKENEGNVDGKVHCCISER--KLDAFNQVVEARSKRI-----ILVKNLPYRTLPTD 463
+ E E H I E L++ ++ E ++I + ++NLPY T D
Sbjct: 242 EKIETPEPE-------HEVIEEHGASLESRDKEEETVREKILETGRLFLRNLPYATKEDD 294
Query: 464 LKALFEPFGDLGRVLVPPYGITG------LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEW 517
L+ LF+ +G++ V V TG +VEF+ A AA+++L FK +++
Sbjct: 295 LQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYVFKGRMMHILP 354
Query: 518 APEGVFAEAKEKS 530
E E +E+S
Sbjct: 355 GDEKRTKEGEEES 367
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 335 ESGR-IFVRNLSYTVTEDDLTKLFEK-YGPLAEV------ILPIDKETDKTKGFALVTFL 386
ESG +FV+NL++ T+ L LF K YG L + + P + + GF V F
Sbjct: 638 ESGSTLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFY 697
Query: 387 MPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
A A + + G + G L L I + ++G + K Q +
Sbjct: 698 TAFDAKTALKDMQGELLDGHSLELKISHRENADKGAL-----------KRKEVKQKEQGE 746
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKA 498
+ +LV+NLP+ +++ LFE FG + + +P + G V+F+ ++A
Sbjct: 747 CTK-LLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHR 805
Query: 499 AFNSLAY-TKFKEVPLYLEWA 518
AF+SL + T L LEWA
Sbjct: 806 AFDSLVHSTHLYGRRLVLEWA 826
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+ V+NL T TE L K FEKYG +++ L KE K +GFA V FL A+ A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 398 LDGTVFLGRMLHLIPGKP 415
+ T F + L + +P
Sbjct: 63 SNQTFFNSKKLTVEECRP 80
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 147/358 (41%), Gaps = 81/358 (22%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG------LVEFLQKNQAKAAFNSL 503
++VKNLP L+ FE +G + + Y G V FL + A A
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLK-YTKEGKFRGFAFVGFLDEGSASNALAKS 63
Query: 504 AYTKFKEVPLYLE-------------WAPEGVFAEAKEKSKGKEKEKNEEEGEEGEE--- 547
T F L +E W+ + A +++ G+++E N + +E EE
Sbjct: 64 NQTFFNSKKLTVEECRPFGDANKPRAWSKYAKDSSAYKRTHGEKEEANPGKSDETEEPAP 123
Query: 548 EKKENTAEEDN---QQGVPEVEENVEEDEEREPEP-------------DTTLYI------ 585
+K+++ A+ D +GV VE+ V+ +++ E DT+L +
Sbjct: 124 KKQKDDAKFDQFLEAKGVV-VEKEVKLSKDKSAEAKKLMAELMDGIGGDTSLSLIFSGLP 182
Query: 586 ---KNLNFNSTEDSIRRHFKKCG-----PIASVTVARKKDPKSP----GQFLS-MGYGFV 632
K N + IR K A VT R D + GQFL G
Sbjct: 183 SSAKGKNIKEWLNPIRVKAMKIARNEDVAAAFVTFNRPPDVRRALQKDGQFLGGFKIGIE 242
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRN 692
+ T E ++ ++EH L+ ++ E TV+ K +TG ++ +RN
Sbjct: 243 KIETPEP--------EHEVIEEHGASLESRDK----EEETVREK----ILETG-RLFLRN 285
Query: 693 IPFQAKQSEVEELFKAFGELKFVR--LPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+P+ K+ +++ LFK +GE+ V+ + KK +G +GF VEF+ A A AL
Sbjct: 286 LPYATKEDDLQFLFKKYGEVSEVQVVIDKK---TGACKGFAIVEFVFPEAAVAAYSAL 340
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 214/392 (54%), Gaps = 51/392 (13%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
KL AF+ + RS +LVKNLP+ L+ LFE GDL ++PP LVE+++
Sbjct: 710 KLSAFDTRIGKRSTTTLLVKNLPFAAEEKTLRPLFEAHGDLSNFVMPPSRTMALVEYMEP 769
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKE------------KSKGKEKEKNEEE 541
++A+ F LAY K+K+ PLYLEWAP+ F ++ E K++ +
Sbjct: 770 SEARRGFRKLAYRKYKDEPLYLEWAPKQCFVDSPEEPTTDWPADSASKAEPTAQATAAPA 829
Query: 542 GEEGEEEKKENT-------------AEEDNQQGVPE----------------VEENVEED 572
+KE T ++ QQ P EE +D
Sbjct: 830 APAEAPPQKERTDVNKKANKKKAATKDDTTQQQKPHDAAQSSNSSQSAKAHPAEELSGKD 889
Query: 573 EEREPEPDTT-----LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSM 627
E E E DT+ +++KNL+F++ ED++R HF+ GPI SV VARK +PK P + LSM
Sbjct: 890 EGAE-EVDTSGPSSSVFVKNLHFDTDEDALRHHFEGIGPIRSVRVARKPNPKEPSRPLSM 948
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSK 687
G+GFV++ +R+ +A+K+L SSL EH +ELK S R T + + K +K
Sbjct: 949 GFGFVEYKSRQDAVRAIKMLHGSSLQEHTLELKMSERT--GAPLTKRERQGKKMKAKSNK 1006
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
++VRNI F+A EV++LF G + VRLP+K G HRGF F+EF TK EA+ A A
Sbjct: 1007 LVVRNIAFEATPKEVQQLFSPHGNIVSVRLPRKQY-DGTHRGFAFIEFSTKQEARDAFSA 1065
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRKRTNR 779
L THLYGRRL +E+AE+ +++E +R++T R
Sbjct: 1066 LS-GTHLYGRRLAMEFAEDDESLETLRQKTQR 1096
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 23/216 (10%)
Query: 214 VSKAPVHK----RQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYI 263
+ +APV + ++ T+ V LP ++ ++ +FKPL VR F G A++
Sbjct: 413 LDEAPVEELTKPERFFTVRVLGLPFKAREPEIVGFFKPLKPIDVRLLFDKRKRSSGRAFV 472
Query: 264 GFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
F + KAL K+KS + + + + + N +E ++ + +
Sbjct: 473 DFATKPEWKKALEKHKSKMGKRYIEVT----------AAIPERNIMQQIEKLEPEDKPKK 522
Query: 324 EDSVQFA---EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGF 380
+ EDI ESGR+FVRNL Y ED+L +LFE +GPL+E+ +PID ET K KGF
Sbjct: 523 DYPAPLRPEDEDIGESGRLFVRNLPYACREDELRELFEAFGPLSELHMPIDGETKKPKGF 582
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
A +TF++PEHA+QA+Q+LD T+F GR+LH++P + K
Sbjct: 583 AFITFVLPEHASQAFQNLDNTIFQGRLLHVLPARHK 618
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 27/203 (13%)
Query: 330 AEDIAESG---RIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL---PIDKETDK--TKGFA 381
AE++ SG +FV+NL + ED L FE GP+ V + P KE + + GF
Sbjct: 892 AEEVDTSGPSSSVFVKNLHFDTDEDALRHHFEGIGPIRSVRVARKPNPKEPSRPLSMGFG 951
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQV 441
V + + A +A + L G+ L L K E G ER+ +
Sbjct: 952 FVEYKSRQDAVRAIKMLHGSSLQEHTLEL---KMSERTG-----APLTKRERQ----GKK 999
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG------LVEFLQKNQ 495
++A+S +++ V+N+ + P +++ LF P G++ V +P G +EF K +
Sbjct: 1000 MKAKSNKLV-VRNIAFEATPKEVQQLFSPHGNIVSVRLPRKQYDGTHRGFAFIEFSTKQE 1058
Query: 496 AKAAFNSLAYTKFKEVPLYLEWA 518
A+ AF++L+ T L +E+A
Sbjct: 1059 ARDAFSALSGTHLYGRRLAMEFA 1081
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 6 SGPVVPRNHISLLDLDEVEFIYKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGY 65
SG VP + I + +L + I + +L+ F + G +T V+L RR A+IG+
Sbjct: 8 SGQSVPSSRIIVKNLPK-----HIQEPRLRELFAKYGELTQVKLLSK-----RRMAYIGF 57
Query: 66 HREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQ 116
D A AA+ N+ +V +S+I+V +GD P+ WSK + SSAY+
Sbjct: 58 KDVDSATAAVSKENDVFVDTSKIEVAHALAVGDQRLPRPWSKQSRGSSAYE 108
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 561 GVPEVEENVEE------DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
G EV+ + EE +E +PE T+ + L F + E I FK PI +
Sbjct: 402 GSEEVDSDAEELDEAPVEELTKPERFFTVRVLGLPFKAREPEIVGFFKPLKPIDVRLLFD 461
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS--NRNLESEATT 672
K+ S G FV F T+ +AL+ S + + IE+ + RN+ +
Sbjct: 462 KRK-------RSSGRAFVDFATKPEWKKALEK-HKSKMGKRYIEVTAAIPERNIMQQIEK 513
Query: 673 VK-------------RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK 719
++ R ++G ++ VRN+P+ ++ E+ ELF+AFG L + +P
Sbjct: 514 LEPEDKPKKDYPAPLRPEDEDIGESG-RLFVRNLPYACREDELRELFEAFGPLSELHMP- 571
Query: 720 KMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
+ G + +GF F+ F+ A +A + L +T GR L
Sbjct: 572 -IDGETKKPKGFAFITFVLPEHASQAFQNL-DNTIFQGRLL 610
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 651 SLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFG 710
+L E I + + R LE + + + K++ + +LV+N+PF A++ + LF+A G
Sbjct: 690 ALGESNI-IAENKRFLEEHGVKLSAFDTRIGKRSTTTLLVKNLPFAAEEKTLRPLFEAHG 748
Query: 711 ELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+L +P R VE++ +EA+R + L + L LEWA
Sbjct: 749 DLSNFVMPPS-------RTMALVEYMEPSEARRGFRKLAYRKY-KDEPLYLEWA 794
>gi|403416240|emb|CCM02940.1| predicted protein [Fibroporia radiculosa]
Length = 805
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 234/842 (27%), Positives = 372/842 (44%), Gaps = 163/842 (19%)
Query: 29 ITQEQLKAKFEEK----GTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
+TQE+L++ F+ GT+TDV+L +G RRF FIGY +A+ A +FN +V
Sbjct: 13 LTQERLRSYFDSPDGPGGTLTDVKLVCRPDGTSRRFGFIGYKSPAEAERAKKWFNRAFVD 72
Query: 85 SSRIKVEKCSNLGDTTKP-------------KSWSKYAPDSSAYQKLHNIAPKQDLKPEH 131
SSRI VE D P ++ ++ D A + I ++ K
Sbjct: 73 SSRILVEIVEGSKDAPPPRPNKRPRLGPGPDETETRLPNDIRATGQASGILAQKQSKASQ 132
Query: 132 TKDS--------KPGKKSKNDPTFSDF--------LQLHGKDV------------SKLLP 163
+K +P ++K P+++D +G D+ SK P
Sbjct: 133 SKSHLDEFMQVMQP--RTKKGPSWADADVAMPLNRPATNGIDIKDQIDATQSRKSSKAQP 190
Query: 164 LSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKA------ 217
S ++ E K+ + + ++ ISDM++ + +TK A D + PP KA
Sbjct: 191 TSGENDEMKDATDSLDFESEHRDDGISDMDWFRKRTK----AVLDEADPPAEKAFEQSDE 246
Query: 218 -------------------PVHKRQYHT--IVVKNLPAGVKKKDLKAYFK--------PL 248
PV + T + ++NL + +L+ F+ +
Sbjct: 247 EVDDVDRHEATVSEDPPPDPVKETILQTGRLFIRNLAFTCTEDELRELFRNQGEVSNIHI 306
Query: 249 PLASVRTTFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDN 307
PL +V G+AY+ F A +++ ++G+ L+I + G +D
Sbjct: 307 PLDAVTKQPKGLAYVTFARPAQALSAFEALDRTSFQGRLLHILP-----AVDRKGKVEDE 361
Query: 308 NNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYG-PLAEV 366
+N K K + + A+ A +G+ F + Y ++ ++ + ++ P +E+
Sbjct: 362 HNGK------KTVKGERE----AKRKAAAGKEFNWAMLYMNSDAVVSSVADRMNIPKSEI 411
Query: 367 ILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKV 426
+ P E+D A V + E H+I NE +
Sbjct: 412 LNP---ESDN----AAVKLALAE------------------THII------NETKSFLES 440
Query: 427 HCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG 486
H + L F+ RS ILVKN+PY T L+ +F G+L RVLVPP G
Sbjct: 441 HGVV----LSVFSSSRVQRSDTTILVKNIPYGTSTDTLRTMFGTHGELRRVLVPPAGTLA 496
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGE 546
++EF Q A+ AF SLAY + +YLE AP G+F++ S G+
Sbjct: 497 IIEFEQAADARTAFRSLAYRRLGNTIMYLEKAPMGMFSDVPADSPAM----------SGQ 546
Query: 547 EEKKENTAEEDNQQGVPEVEENVEEDEEREPEP----DTTLYIKNLNFNSTEDSIRRHFK 602
K A P + E ++ EP TTL++KNL F++T + + +
Sbjct: 547 SSKAPVVATAVEPIRAPVSGAALVEGDDAATEPPLSAGTTLFVKNLAFSTTTEGLVHALR 606
Query: 603 KCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS 662
A V K DP P LSMGYGFV F T++ +ALK L+ LD H + K +
Sbjct: 607 HLPGFAFARVQAKVDPARPTARLSMGYGFVGFRTKDDAKRALKSLEGFVLDGHVLAAKWA 666
Query: 663 NRNL-ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM 721
R + E+E VK K +K++V+N+PF+A + +++ELF A +LK VRLP+K
Sbjct: 667 GRGVDEAEGQEVK------GKPKSAKMIVKNVPFEATKKDIQELFGAHAQLKSVRLPRKF 720
Query: 722 VGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE-ADNVEDIRKRTNRY 780
+ RGF F+EF++ +EA RA A + TH GR LVLEWAE+ A +VE++RK+
Sbjct: 721 --NHRTRGFAFLEFVSPHEAARA-HATLRHTHFLGRHLVLEWAEDGAADVEELRKKAGVG 777
Query: 781 FG 782
FG
Sbjct: 778 FG 779
>gi|353238423|emb|CCA70370.1| probable RNA-binding protein [Piriformospora indica DSM 11827]
Length = 799
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 226/817 (27%), Positives = 359/817 (43%), Gaps = 164/817 (20%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDT---- 99
+TDV++ + +G RR AF+G+ E++AQ A +YF+ TY+ SR++VE + D
Sbjct: 52 LTDVRIVHKKDGSSRRIAFLGFKTEEEAQRAREYFDKTYLDVSRLRVETVTGTKDAPIHV 111
Query: 100 ------------TKPKSWSKYAPDSSA-YQKLHNIAPKQDLKPEHTKD--SKPGKKSKND 144
+ ++ + D+ A + + PK+ K E ++ G K
Sbjct: 112 KDKRTREKEDNGDEGRNPKRRKVDAGAQTSAVEELDPKKKRKAERLEEFTRVMGSKRNAG 171
Query: 145 PTFSDFLQLHGKDVSKLLPLSNKDGEEKEEE-------NEDESNNQIAHADISDMEYLKL 197
P+++ QL + +P+ ++KE + + E + A ++SDME+L+
Sbjct: 172 PSWTADNQLQPELA---VPVKTAKTQKKESKMPEKKAEEKMEEDMDGAQEELSDMEWLRR 228
Query: 198 KTKSKDTAPSDPS----------------VPPVSKAPVHKRQYHTIVVKNLPAGVKKKDL 241
K ++ TA D + V PV + V+NL + +L
Sbjct: 229 KMQASTTALEDKAFEQSDEEMEEKKEEEQVSPVDANRAAIETNGRLFVRNLVFSCTQDEL 288
Query: 242 KAYFKPL-PLASVRTTFL------------------GMAYIGFKDEKNCNKALNK-NKSF 281
A+F P P+ ++ T G AY+ FKD + A +K+
Sbjct: 289 TAHFSPFGPIEQLQFTSAELTHSQVHIPVDAESNPKGFAYVRFKDASHAVAAYEALDKTS 348
Query: 282 WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFV 341
++G+ L+I + D + +N+NAS +K K + Q+ +D + I
Sbjct: 349 FQGRLLHILP-AIDRVPRT-----ENSNASNNPMKLKAMREQKRKENSGKDFNWA--ILY 400
Query: 342 RNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGT 401
N D+ + G V L + + T ++ E QH
Sbjct: 401 MNAXXXXXXXDILNPDSEVGGSPAVKLALAE-----------THIIAETKKYLEQH---- 445
Query: 402 VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLP 461
NVD L F+Q RSK IILVKN+PY T
Sbjct: 446 -------------------NVD-----------LSLFSQHRIPRSKTIILVKNIPYGTSS 475
Query: 462 TDLKALFEPFGDLGRVLVPPYGITGLVEFLQK--NQAKAAFNSLAYTKFKEVPLYLEWAP 519
++L +F FG L +VL+PP G +V+F QA A+ LAY + K+ LYLEWAP
Sbjct: 476 SELHEMFSAFGSLKQVLMPPAGTIAIVQFPDDAGKQAGDAWRCLAYKRLKDSILYLEWAP 535
Query: 520 EGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEP 579
+G+F +G + AEE ++++++EDEE P
Sbjct: 536 QGLF--------------------DGPPLDSKKPAEE-------SIDQDIKEDEELAA-P 567
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
TL++ NL+F +T + F+ A VA K DP PGQ LS G+GFV F E+
Sbjct: 568 GATLHVGNLSFATTSTRLASVFRHLPSFAFAKVATKADPSKPGQVLSQGFGFVGFKDVEA 627
Query: 640 LNQALKVLQNSS-------LDEHQIELK---RSNRNLESEATTVKRKSSNVAKQTGSKIL 689
+A+K + LD H +++ R ++E +A + K S K G+K++
Sbjct: 628 ARKAMKGFNRQANGTGSLVLDGHVLKISFAGRGREDVERDAGGILGKHS---KSKGTKLI 684
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V+N+ F+ + E+ ELF A G++K VRLP + RGF FV+F T+NEA+ AM L
Sbjct: 685 VKNLAFEVSKKELWELFSAHGQVKSVRLPNR--ADRRSRGFAFVDFATRNEAENAMGQLR 742
Query: 750 QSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTAVG 786
S HL GR LVLEWAE +VE++R +T +G G
Sbjct: 743 HS-HLLGRHLVLEWAEREQDVEEMRYKTKMEYGDGAG 778
>gi|426193530|gb|EKV43463.1| hypothetical protein AGABI2DRAFT_227175 [Agaricus bisporus var.
bisporus H97]
Length = 755
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 223/806 (27%), Positives = 372/806 (46%), Gaps = 144/806 (17%)
Query: 29 ITQEQLKAKFEEKGT----VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
+T +L+ FE++G +TDV++ Y ++G RRF F+GY +++A AA ++F+ T++
Sbjct: 13 VTPVRLRQHFEQQGCPAGILTDVKVAYKSDGTSRRFGFVGYKTDEEAFAARNWFDKTFID 72
Query: 85 SSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKND 144
S+RI V D P+ N P+ P T + P ++SK+D
Sbjct: 73 STRIHVTLIDGSKDAPAPRP---------------NKRPRLGPSPIET-NPLPIRESKSD 116
Query: 145 PTF---------SDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQ--IAHADISDME 193
+ +FL++ K +K P+ + + K+ +++ ++ + A +SD E
Sbjct: 117 KSMVKEKLPSQAEEFLEVM-KPRTKKGPIWANEAQPKDIRPQEQLVDKAPVNTATLSDAE 175
Query: 194 YLKLK------------------TKSKDTAPSDPSVPPVSKAPVHKRQY----HTIVVKN 231
++K + +++ + PS P VS R+ H + ++N
Sbjct: 176 WMKQRMSNNVDNEGKAFEQSDEESENPNPKPSLPDPMDVSSPQDVARETILRTHRLFLRN 235
Query: 232 LPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFK---DEKNCNKALNKNKS 280
L + DL F+ +PL S+ G+AY+ F D + +AL+K KS
Sbjct: 236 LAFSCTETDLLELFRSHGDISQVHIPLDSISKQPKGLAYVTFATGADATSAYEALDK-KS 294
Query: 281 FWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIF 340
F +G+ L+I A D + +E + + +E+S + + + SG+ F
Sbjct: 295 F-QGRLLHILP-----------AQDQQRSFGVEEGEMRKKTVKEESERKRKSL--SGKSF 340
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV-TFLMPEHATQAYQHLD 399
++ Y ++ + + + IL + + AL T ++ E T++Y
Sbjct: 341 NWSMLYMNSDAVASSIANRMSIDKSEILSAENGDNPAVKLALAETHIIQE--TKSYLESQ 398
Query: 400 GTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRT 459
G + L +F+ +ARS ILVKN+PY T
Sbjct: 399 GVI--------------------------------LSSFS--TKARSDTTILVKNIPYGT 424
Query: 460 LPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAP 519
++ LF P G L RVLVPP G +VEF + ++A F ++AY + +YLE P
Sbjct: 425 TLDQIRDLFTPHGQLSRVLVPPAGTMAVVEFERPDEASKGFKAVAYRRLGNSVIYLEKGP 484
Query: 520 EGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEE-NVEEDEEREPE 578
G+F + E + G K +PE E + EE
Sbjct: 485 SGMFTD--------EPIQTASGGPSSLPVVK-----------IPEQESTGGDAGEEVSIT 525
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP-GQFLSMGYGFVQFYTR 637
TLY+KNL+F +T++ + F+ A + K DPK P G LSMGYGF+ F
Sbjct: 526 GGMTLYVKNLSFVTTQERFAQVFQHLPSFAFARIQTKPDPKQPSGPRLSMGYGFIGFKDV 585
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
E +ALK +Q LD H + +K + R +E + K K +K +K++V+N+PF+A
Sbjct: 586 EGAKKALKSIQGFVLDGHSLHVKFAGRGVEEDE--AKNKDGVNSKSRTTKVIVKNVPFEA 643
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ ++ +LF A G LK VRLPKK RGF F+EF++++EA+ A AL + THL GR
Sbjct: 644 TKKDIRDLFSAHGHLKSVRLPKKF--DSRTRGFAFLEFVSRHEAENAFNAL-RHTHLLGR 700
Query: 758 RLVLEWAEEAD-NVEDIRKRTNRYFG 782
LVLEWAEEA+ +++ +R++ FG
Sbjct: 701 HLVLEWAEEAEQDLDVLRQKAGVGFG 726
>gi|225563037|gb|EEH11316.1| multiple RNA-binding domain-containing protein [Ajellomyces
capsulatus G186AR]
Length = 801
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/443 (34%), Positives = 233/443 (52%), Gaps = 36/443 (8%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ E+GR+FVRNL Y +E D+ LF +G + E+ + D K+KGFA V + PE A
Sbjct: 334 LRETGRLFVRNLLYNASESDMEPLFSPFGKIDEIHVAFDTRHSKSKGFAYVQYANPE-AD 392
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERK---------LDAFNQVVE 443
+ + + + L P + H I E K LD+F Q
Sbjct: 393 AVMSSVSERLGVSKSELLDPTSSDAAIRQAHAETHV-IQETKAYFSSNGVNLDSFKQ--R 449
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
R ILVKN + D++ LFEPFG + R+L+PP G +VEF+ ++ + AF L
Sbjct: 450 ERGNTAILVKNFSFGVKADDIRKLFEPFGQIKRLLMPPSGTIAIVEFVMADECQKAFKGL 509
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
AY K ++ L+LE AP+ +F E S+ + + + D +
Sbjct: 510 AYRKLGDLILFLERAPKDLFDEKATASRVIAPPP---------KVVSQTFSTSDTFKAT- 559
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E +E P +TL+++NLNF++T + F+ S V K DPK PG+
Sbjct: 560 ------ETEEAETPLETSTLFVRNLNFSTTNARLTEVFQPLDGFLSARVKTKADPKRPGE 613
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK- 682
LSMG+GFV+F T + AL +Q LD+H++ +K S++ ++ A +R+ N K
Sbjct: 614 TLSMGFGFVEFRTAAQAHAALATMQGYKLDQHELVVKTSHKAMD--AAEERRREDNAKKL 671
Query: 683 -QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K + RGF F +FI+ EA
Sbjct: 672 AMRGTKILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDRTA--RGFAFADFISAREA 729
Query: 742 KRAMKALCQSTHLYGRRLVLEWA 764
+ AM AL ++THL GRRLVLE+A
Sbjct: 730 ENAMDAL-KNTHLLGRRLVLEFA 751
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 127/320 (39%), Gaps = 38/320 (11%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKAL 275
+R I+VKN GVK D++ F+P ++ + +A + F C KA
Sbjct: 449 RERGNTAILVKNFSFGVKADDIRKLFEPF--GQIKRLLMPPSGTIAIVEFVMADECQKAF 506
Query: 276 NKNKSFWKGKQLNIY--KYSKDNSAKYSGA----ADDNNNASMENIKAKHWKSQEDSVQF 329
K ++ K L ++ + KD + + A A S + +K+ E +
Sbjct: 507 -KGLAYRKLGDLILFLERAPKDLFDEKATASRVIAPPPKVVSQTFSTSDTFKATE--TEE 563
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVT 384
AE E+ +FVRNL+++ T LT++F+ + + + + GF V
Sbjct: 564 AETPLETSTLFVRNLNFSTTNARLTEVFQPLDGFLSARVKTKADPKRPGETLSMGFGFVE 623
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEA 444
F A A + G L + K ER+ + + +
Sbjct: 624 FRTAAQAHAALATMQGYKLDQHELVV----------KTSHKAMDAAEERRREDNAKKLAM 673
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKA 498
R + IL+KNLP++ D++ LF +G L V VP G +F+ +A+
Sbjct: 674 RGTK-ILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDRTARGF-AFADFISAREAEN 731
Query: 499 AFNSLAYTKFKEVPLYLEWA 518
A ++L T L LE+A
Sbjct: 732 AMDALKNTHLLGRRLVLEFA 751
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ ++L+ F + VTD + RR F+G+ +AQ A++YFN TY+ S+I
Sbjct: 16 FSNDELRKHFSTRYQVTDAHVIPK-----RRIGFVGFKTPTEAQDAVNYFNKTYIRMSKI 70
Query: 89 KVE 91
VE
Sbjct: 71 AVE 73
>gi|168015560|ref|XP_001760318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688332|gb|EDQ74709.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 878
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 216/348 (62%), Gaps = 27/348 (7%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS +ILVKNLP+ T +L ++F FG + RV++PP LVE+L+ +A+ AF LA
Sbjct: 523 RSSTVILVKNLPFSTTEDELVSMFGVFGSIARVILPPTKTLALVEYLEAAEARRAFKGLA 582
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKS--KGKEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
Y +FK VPLYLEWAP + K+ G EK K G G++ + E V
Sbjct: 583 YKRFKHVPLYLEWAPVNLLTGVKKSRVFTGAEKTK----GAVGDKLLQRVAVETQ----V 634
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK---CGPIASVTVARKKDPK 619
+ E+ + D+ R +L++KNLNF++TE S+++HF + G + SVT+ +KK K
Sbjct: 635 AALTEDDDVDQAR------SLFVKNLNFSTTEVSLKKHFDQKITQGSVRSVTI-KKKQSK 687
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN---RNLESEATTVKRK 676
S G+ LSMG+GF++F + ++ + LQ + L+ H + L+ S+ + S++ T K
Sbjct: 688 S-GKPLSMGFGFIEFDSVDTAKMVCQNLQGTVLEGHALILQLSHNSKKACGSDSKTSATK 746
Query: 677 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
+K++ +KI+VRN+ F+A + +++++F FG++K +RLPKK G+ HRGF FVEF+
Sbjct: 747 GKAESKESSTKIIVRNVAFEATRKDLQQIFNPFGQIKSIRLPKKFDGN--HRGFAFVEFL 804
Query: 737 TKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTA 784
TK EA+ A +AL Q+THLYGR +VLE A+E +++E++R RT F A
Sbjct: 805 TKKEAQNAFEAL-QNTHLYGRHMVLERAKEGESLEELRARTASQFSEA 851
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 61/81 (75%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E ++E+GR+FVRNL YT TE++L +LF K+G L+EV L +DK T ++K A V +++PE
Sbjct: 324 ESVSETGRLFVRNLPYTATEEELAELFGKFGELSEVHLVLDKTTKRSKAMAFVLYMIPEC 383
Query: 391 ATQAYQHLDGTVFLGRMLHLI 411
A +A + LD ++F GR++H++
Sbjct: 384 AVRAMEQLDKSIFQGRLIHIL 404
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 22/141 (15%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T+E+L+ F KG VTD ++ T +G+ R+F F+GY E++A+ A YF+ ++ +SR+
Sbjct: 18 VTEERLREHFAAKGEVTDAKIIRTRDGRTRQFGFVGYRTEEEAKDAAKYFHRSFFDTSRL 77
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEH----TKDSKPGKKSK-- 142
E +GD P+ WS+++ SS ++ PK D E+ KD+ KK++
Sbjct: 78 TCELAQAVGDPNLPRPWSRHSEGSSKFK------PKSDDVVENPTTSAKDTGKFKKNQDF 131
Query: 143 ----------NDPTFSDFLQL 153
NDP +FL++
Sbjct: 132 RSKTADSELENDPQLQEFLEV 152
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 153/371 (41%), Gaps = 55/371 (14%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYF--------------KPLPL------ASVRTTFLGMA 261
R I+VKNLP + +L + F K L L A R F G+A
Sbjct: 523 RSSTVILVKNLPFSTTEDELVSMFGVFGSIARVILPPTKTLALVEYLEAAEARRAFKGLA 582
Query: 262 YIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWK 321
Y FK + + +N+ K S ++GA + ++ +
Sbjct: 583 YKRFK----------HVPLYLEWAPVNLLTGVK-KSRVFTGAEKTKGAVGDKLLQRVAVE 631
Query: 322 SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEV-ILPIDKETDK---- 376
+Q ++ +D+ ++ +FV+NL+++ TE L K F++ V + I K+ K
Sbjct: 632 TQVAALTEDDDVDQARSLFVKNLNFSTTEVSLKKHFDQKITQGSVRSVTIKKKQSKSGKP 691
Query: 377 -TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKL 435
+ GF + F + A Q+L GTV G L L + C S+ K
Sbjct: 692 LSMGFGFIEFDSVDTAKMVCQNLQGTVLEGHALILQLSHNSKK---------ACGSDSKT 742
Query: 436 DAFNQVVEAR-SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP-----YGITGLVE 489
A E++ S I+V+N+ + DL+ +F PFG + + +P + VE
Sbjct: 743 SATKGKAESKESSTKIIVRNVAFEATRKDLQQIFNPFGQIKSIRLPKKFDGNHRGFAFVE 802
Query: 490 FLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEK 549
FL K +A+ AF +L T + LE A EG E+ E+ + + + E +G K
Sbjct: 803 FLTKKEAQNAFEALQNTHLYGRHMVLERAKEG---ESLEELRARTASQFSEANNDGRAAK 859
Query: 550 KENTAEEDNQQ 560
+ AE D+ Q
Sbjct: 860 RRKQAEMDDSQ 870
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 145/373 (38%), Gaps = 85/373 (22%)
Query: 327 VQFAEDIAE---------SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
V+ ED+A S I V+NL ++ TED+L +F +G +A VILP T
Sbjct: 507 VEVLEDVASGKEIKVTRSSTVILVKNLPFSTTEDELVSMFGVFGSIARVILP------PT 560
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL----------------IPGKPKENEGN 421
K ALV +L A +A++ L F L+L G K
Sbjct: 561 KTLALVEYLEAAEARRAFKGLAYKRFKHVPLYLEWAPVNLLTGVKKSRVFTGAEKTKGAV 620
Query: 422 VDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFE---PFGDLGRVL 478
D + E ++ A + + R + VKNL + T LK F+ G + V
Sbjct: 621 GDKLLQRVAVETQVAALTEDDDVDQARSLFVKNLNFSTTEVSLKKHFDQKITQGSVRSVT 680
Query: 479 V---------PPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEK 529
+ P G +EF + AK +L T + L L+ + +K
Sbjct: 681 IKKKQSKSGKPLSMGFGFIEFDSVDTAKMVCQNLQGTVLEGHALILQ------LSHNSKK 734
Query: 530 SKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLN 589
+ G + + + +G+ E KE++ T + ++N+
Sbjct: 735 ACGSDSKTS---ATKGKAESKESS---------------------------TKIIVRNVA 764
Query: 590 FNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQN 649
F +T +++ F G I S+ + +K D G+ FV+F T++ A + LQN
Sbjct: 765 FEATRKDLQQIFNPFGQIKSIRLPKKFDGN------HRGFAFVEFLTKKEAQNAFEALQN 818
Query: 650 SSLDEHQIELKRS 662
+ L + L+R+
Sbjct: 819 THLYGRHMVLERA 831
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+TG ++ VRN+P+ A + E+ ELF FGEL V L + + FV ++ A
Sbjct: 328 ETG-RLFVRNLPYTATEEELAELFGKFGELSEVHLVLDKT-TKRSKAMAFVLYMIPECAV 385
Query: 743 RAMKALCQSTHLYGRRLV 760
RAM+ L +S ++ RL+
Sbjct: 386 RAMEQLDKS--IFQGRLI 401
>gi|169855509|ref|XP_001834421.1| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
gi|116504503|gb|EAU87398.1| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
Length = 807
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 224/812 (27%), Positives = 358/812 (44%), Gaps = 151/812 (18%)
Query: 30 TQEQLKAKFEEK-------GTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTY 82
T E+L+ FE K G +TDV++ + +G RRF F+GY ++A A ++F+ T+
Sbjct: 16 TPERLRQHFEGKHNPGAPRGQITDVKVSFKPDGTSRRFGFVGYKTPEEAVKAKEWFDRTF 75
Query: 83 VFSSRIKVEKCSNLGDTTKPKSWSKYA---PDSSAYQKLHNIAPKQDLKPEHTKDSKPGK 139
+ S+RI V + D +P + A P S + K +
Sbjct: 76 IDSARISVALVEDKPDA-RPNKRRRLASDEPSSGSNTTKLGKPSKSSDPSSSSTAPSTSN 134
Query: 140 KSKNDPTFSDFLQLHGKDVS----KLLP---LSNKDGEEKEEENEDESNNQIAHADISDM 192
+K+ TF + +Q K S +P + EE + ED+ +SDM
Sbjct: 135 SNKHLDTFLEVMQPRNKGPSWANDAAVPEPVVPAAPAEEADASMEDKPEASAEQEGLSDM 194
Query: 193 EYLKLKTKSK-----------------------------DTAPSDPSVPPVSKAPVHKRQ 223
E+++ + + + AP+ P P RQ
Sbjct: 195 EWMRRRMTANVDKVNTAVFEQSDDEEDGKKDAGEKEEVVEAAPARPEDPTEETI----RQ 250
Query: 224 YHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCNKAL 275
+ V+NL +++L F P +P + GMAYI F ++ A
Sbjct: 251 TARLFVRNLTFSCTEEELLELFSPFGNVVKAHIPTDATTKQGKGMAYITFSSPESAVAAY 310
Query: 276 NK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
+K ++G+ L+I GA D A E+ K K + + A+ A
Sbjct: 311 KSLDKKPFQGRLLHIL-----------GAVDRKPKAEAEDEGKKSVKEE----RAAKRKA 355
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYG-PLAEVILPIDKETDKTKGFALV---TFLMPEH 390
+G+ F ++ Y ++ + + ++ P ++ P ET L T ++ E
Sbjct: 356 LAGKEFNWSMLYMNSDAVASSIADRMNIPKTSILNPDPSETTTNPAVKLALAETHIITET 415
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
T FL E++G + L +F V RS I+
Sbjct: 416 KT----------FL------------ESQGVL------------LSSFTSKV--RSDTIL 439
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKE 510
LVKN+PY T ++ +FEP G+L RVLVPP G +VEF++ +A AF ++AY +
Sbjct: 440 LVKNIPYGTTEPQIREMFEPHGELVRVLVPPAGTIAVVEFVKGEEAAKAFKAVAYRRLGN 499
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQ----------Q 560
+YLE P G+F E E EK+ T EED + +
Sbjct: 500 SVVYLEKGPVGMFVSDPE-----------------EVEKRRVTTEEDRRLLESSVIKVPE 542
Query: 561 GVP-EVEENVEE---DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK 616
+P E ++ E E +E +TLY+KNL+F +T++ + F + + K
Sbjct: 543 ALPIETTDSAGETAGGEGQETVAGSTLYVKNLSFATTQERLVSLFSHLPSFSFARIQTKP 602
Query: 617 DPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK 676
DPK PG LSMGYGF+ F E +ALK LQ +D H++ +K + R + A +
Sbjct: 603 DPKRPGARLSMGYGFIGFKDVEGARKALKSLQGFVVDGHELHVKVAGRGRDEVAKELGVA 662
Query: 677 SSNVA--KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
+SN A K +K++V+N+PF+A + ++ +LF A G+LK VRLP+K RGF F+E
Sbjct: 663 TSNDATGKSRTTKMIVKNVPFEATKKDIRDLFGAHGKLKSVRLPRKF--DSRTRGFAFLE 720
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
F++++EA+ A AL + THL GR LVLEWA+E
Sbjct: 721 FVSRHEAENAFNAL-RHTHLLGRHLVLEWAQE 751
>gi|19112391|ref|NP_595599.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|48474243|sp|O13620.1|MRD1_SCHPO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|2257512|dbj|BAA21408.1| hypothetical protein YPR112c [Schizosaccharomyces pombe]
gi|13810221|emb|CAC37370.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe]
Length = 833
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 134/333 (40%), Positives = 195/333 (58%), Gaps = 28/333 (8%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF ARS ++LVKN PY T +L +LF PFG+LGR+L+PP G ++EFL
Sbjct: 495 LDAFKNA--ARSDNVLLVKNFPYGTSAEELTSLFSPFGELGRILIPPAGTIAIIEFLNAP 552
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+ AF+ LAYT+ K LYLE AP VF + ++S GK E +K N
Sbjct: 553 DCRQAFSKLAYTRIKSSILYLEKAPRDVFTTSFKQS-GKP-----------ELAQKVNAV 600
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
E + V E+ E T+Y+KNLNF++ ++ ++ FK S +
Sbjct: 601 EATTSEKVGT--------EDIESLDTATIYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRA 652
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PG++LSMG+GFV+F + S A+ + LD H++E+K S++ +++ A K
Sbjct: 653 KPDPKRPGKYLSMGFGFVEFKDKASAVAAMHAMNGFVLDGHKLEIKLSHQGVDAAAEVRK 712
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
+ SS K G+KIL++N+PF+A + +V+ L A+G+L+ VR+PKK S RGF F E
Sbjct: 713 QDSS---KPKGTKILIKNLPFEATKKDVQSLLGAYGQLRSVRVPKKFDRSA--RGFAFAE 767
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEA 767
F+T EA AM+AL ++THL GR LVL++A A
Sbjct: 768 FVTAREAANAMRAL-KNTHLLGRHLVLQYASNA 799
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 309 NASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL 368
+ASM + QE ++Q I+E+ R+F+RNL+Y+ EDDL LF +G L +V +
Sbjct: 298 DASMLQKAENNVSEQERNIQL---ISETKRLFLRNLTYSCAEDDLKSLFGPFGQLEQVHM 354
Query: 369 PIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
PIDK+T+ KGFA + F + A +AY LD F GR+LH++P K + +
Sbjct: 355 PIDKKTNNPKGFAYIDFHDADDAVRAYLELDAKPFQGRLLHVLPAKARSS 404
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 134/320 (41%), Gaps = 49/320 (15%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKALNK-N 278
R + ++VKN P G ++L + F P L + G +A I F + +C +A +K
Sbjct: 503 RSDNVLLVKNFPYGTSAEELTSLFSPFGELGRILIPPAGTIAIIEFLNAPDCRQAFSKLA 562
Query: 279 KSFWKGKQLNIYKYSKD---NSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI-- 333
+ K L + K +D S K SG + + + A + E EDI
Sbjct: 563 YTRIKSSILYLEKAPRDVFTTSFKQSGKPE-----LAQKVNAVEATTSEKV--GTEDIES 615
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVIL--PIDKETDK--TKGFALVTFLMP 388
++ I+V+NL+++ +++ K+F+ G L+ VI P K K + GF V F
Sbjct: 616 LDTATIYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDK 675
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
A A ++G V G K+ +S + +DA +V + S +
Sbjct: 676 ASAVAAMHAMNGFVLDGH------------------KLEIKLSHQGVDAAAEVRKQDSSK 717
Query: 449 I----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKA 498
IL+KNLP+ D+++L +G L V VP G EF+ +A
Sbjct: 718 PKGTKILIKNLPFEATKKDVQSLLGAYGQLRSVRVPKKFDRSARGF-AFAEFVTAREAAN 776
Query: 499 AFNSLAYTKFKEVPLYLEWA 518
A +L T L L++A
Sbjct: 777 AMRALKNTHLLGRHLVLQYA 796
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTT-KP 102
+TDV + T EG RRFAFIG+ E+ A A+ Y N +YV +SRI+V + + K
Sbjct: 32 ITDVSVAKTKEGVSRRFAFIGFKNEEDADKAIRYLNKSYVETSRIEVHRALDYRSANEKL 91
Query: 103 KSWSKYA 109
+ +SKYA
Sbjct: 92 RPYSKYA 98
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 83/338 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V+N Y + ++LT LF +G L +++P A++ FL QA+ L
Sbjct: 508 LLVKNFPYGTSAEELTSLFSPFGELGRILIP------PAGTIAIIEFLNAPDCRQAFSKL 561
Query: 399 DGTVFLGRMLHL-------------IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
T +L+L GKP+ + KV+ + + +E+
Sbjct: 562 AYTRIKSSILYLEKAPRDVFTTSFKQSGKPE-----LAQKVNAVEATTSEKVGTEDIESL 616
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPF-GDLGRVL-------VPPYGIT---GLVEFLQKN 494
I VKNL + T + + +F+P G L V+ P ++ G VEF K
Sbjct: 617 DTATIYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDKA 676
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
A AA +++ L ++ + +GV A A+ + + K K
Sbjct: 677 SAVAAMHAMNGFVLDGHKLEIKLSHQGVDAAAEVRKQDSSKPKG---------------- 720
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
T + IKNL F +T+ ++ G + SV V +
Sbjct: 721 --------------------------TKILIKNLPFEATKKDVQSLLGAYGQLRSVRVPK 754
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
K D + G+ F +F T A++ L+N+ L
Sbjct: 755 KFDRS------ARGFAFAEFVTAREAANAMRALKNTHL 786
Score = 39.3 bits (90), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
Query: 644 LKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGS--------KILVRNIPF 695
LK + DEH L+R + ++A+ +++ +NV++Q + ++ +RN+ +
Sbjct: 276 LKSFDKENNDEH---LERVTNDKIADASMLQKAENNVSEQERNIQLISETKRLFLRNLTY 332
Query: 696 QAKQSEVEELFKAFGELKFVRLP--KKMVGSGLHRGFGFVEFITKNEAKRA 744
+ +++ LF FG+L+ V +P KK + +GF +++F ++A RA
Sbjct: 333 SCAEDDLKSLFGPFGQLEQVHMPIDKK---TNNPKGFAYIDFHDADDAVRA 380
>gi|212540104|ref|XP_002150207.1| pre-rRNA processing protein Mrd1, putative [Talaromyces marneffei
ATCC 18224]
gi|210067506|gb|EEA21598.1| pre-rRNA processing protein Mrd1, putative [Talaromyces marneffei
ATCC 18224]
Length = 812
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 227/844 (26%), Positives = 366/844 (43%), Gaps = 179/844 (21%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
++ E L F + VTD + RR F+G+ + A+ A YFN T++ S+I
Sbjct: 15 LSNEDLGKHFSSRFPVTDSHVIPN-----RRIGFVGFKDAEIAKEAAKYFNKTFLRMSKI 69
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSA-----YQKLHNIAPKQDLK--------------- 128
VE G++ ++ +++ DS++ +K PK D K
Sbjct: 70 SVEMARPAGESKPTRNRNQFHRDSTSEASNLKRKRDAENPKDDAKLQEFLNVMQHPSKTR 129
Query: 129 ------------------------PEHTKDSKPGKKSKNDPTFSDFLQLHGKDVSKLLPL 164
P H + S+P KKSK T + S +
Sbjct: 130 TWANDDIIPAATTPLEPVVVETQDPSHEQPSRPVKKSKVVETET---PRQATKTSAVQTD 186
Query: 165 SNKDGEEKEEENEDESN-NQIAHADISDMEYLKLKTK---------------SKDTAPSD 208
+N DG + E ++ E ++ SDM++L+ KT + AP++
Sbjct: 187 TNGDGSQPERGDKPEGEASEEEDQPKSDMDWLRSKTSRLLGLLDEEEQEESSPQPAAPAN 246
Query: 209 PSVPP-------------VSKAPVHKRQYHT----------IVVKNLPAGVKKKDLKAYF 245
+V P V++ P ++ Y+ + ++NL + DL+ F
Sbjct: 247 NTVEPIEEEDSDEVEETLVAEEPAEEKDYNADVELIRISGRLFLRNLAYDATEADLETIF 306
Query: 246 KP--------LPLASVRTTFLGMAYIGFKDEKNCNKAL-NKNKSFWKGKQLNIYKYSKDN 296
P + + T+ G AYI + D + +A N + ++G+ L+I S
Sbjct: 307 APFGKIDEIHVAFDTRTTSSKGFAYIQYVDPSSAIEAYKNLDGKDFQGRLLHILPASAKK 366
Query: 297 SAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKL 356
S K N+ + + K K Q + S F N Y ++ ++ +
Sbjct: 367 SYKI-------NDYELSKLPLKQQK------QVKRRMEASSSTFNWNSLYMNSDAVMSSI 413
Query: 357 FEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
++ G +L D T A V QA+ H+I
Sbjct: 414 ADRLGVSKSDLL------DPTSSDAAVK--------QAHAET----------HVIQ---- 445
Query: 417 ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGR 476
+ K + + +D+F Q R ILVKN Y +++ LFEPFG L R
Sbjct: 446 ------ETKAYFTANGVNIDSFKQ--RERGTTAILVKNFSYGVKAAEIRKLFEPFGQLTR 497
Query: 477 VLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKE 536
+L+PP G +VEF + ++A AF LAY K + L+LE AP+ +F S
Sbjct: 498 LLIPPSGTIAIVEFAKPDEASKAFKGLAYRKLGDSILFLERAPKDLFESPPTGSALIA-- 555
Query: 537 KNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTED 595
G EG E K QG E ED E P+ P +TL+++NLNF +T
Sbjct: 556 -----GVEGPEGK---------SQGFSAAETFAAEDNE--PQLPTSTLFVRNLNFTTTSA 599
Query: 596 SIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEH 655
+ F + V K DPK PG+ LSMG+GF++F T+E AL V+ +LD+H
Sbjct: 600 RLSEVFASLDGFLTAKVKTKTDPKRPGETLSMGFGFIEFRTKEQAQAALAVMDGYTLDQH 659
Query: 656 QIELKRSNRNLESEATTVKRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGEL 712
++ +K S++ +++ + R+ + AK+ +KI+++N+PFQA + +V LF A+G+L
Sbjct: 660 KLVVKTSHKGMDAAES---RRQEDTAKKVAARRTKIIIKNLPFQATKHDVRSLFGAYGQL 716
Query: 713 KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW--AEEADNV 770
+ VR+PKK S RGF F +F++ EA+ AM AL ++THL GR+LVLE+ AE D
Sbjct: 717 RSVRVPKKFDRSA--RGFAFADFVSSREAENAMDAL-KNTHLLGRKLVLEYASAEAIDAE 773
Query: 771 EDIR 774
E+IR
Sbjct: 774 EEIR 777
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 148/359 (41%), Gaps = 48/359 (13%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKA--- 274
+R I+VKN GVK +++ F+P L + G +A + F +KA
Sbjct: 464 RERGTTAILVKNFSYGVKAAEIRKLFEPFGQLTRLLIPPSGTIAIVEFAKPDEASKAFKG 523
Query: 275 -----LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
L + F + ++++ SA +G + + A + ED+
Sbjct: 524 LAYRKLGDSILFLERAPKDLFESPPTGSALIAGV--EGPEGKSQGFSAAETFAAEDN--- 578
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-------GFAL 382
E + +FVRNL++T T L+++F + + +TD + GF
Sbjct: 579 -EPQLPTSTLFVRNLNFTTTSARLSEVFASLDGF--LTAKVKTKTDPKRPGETLSMGFGF 635
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
+ F E A A +DG L + K + +D S R+ D +V
Sbjct: 636 IEFRTKEQAQAALAVMDGYTLDQHKLVV-----KTSHKGMD----AAESRRQEDTAKKVA 686
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQA 496
R+K I++KNLP++ D+++LF +G L V VP G +F+ +A
Sbjct: 687 ARRTK--IIIKNLPFQATKHDVRSLFGAYGQLRSVRVPKKFDRSARGF-AFADFVSSREA 743
Query: 497 KAAFNSLAYTKFKEVPLYLEWA-PEGVFAEAK----EKSKGKEKEKNEEEGEEGEEEKK 550
+ A ++L T L LE+A E + AE + EK G++ ++ + + G KK
Sbjct: 744 ENAMDALKNTHLLGRKLVLEYASAEAIDAEEEIRNIEKKTGQQLDRQKLQSLTGTGRKK 802
>gi|365757846|gb|EHM99718.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 879
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 251/516 (48%), Gaps = 94/516 (18%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I E+GR+F+RN+ Y E+D LF +G L EV + +D T ++KGFA V F P++
Sbjct: 331 EKINETGRLFLRNILYNSKEEDFKALFGPFGDLEEVHVALDTRTGQSKGFAYVLFKDPKN 390
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKE--------------------------------- 417
A AY LD +F GR+LH++PG+ K+
Sbjct: 391 AVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNMPLKKQKELKRKAAASKQTFSW 450
Query: 418 -----NEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
N+ V G V + K +Q+++A + + + L + D++ FE G
Sbjct: 451 NSLYMNQDAVLGSVAAKLGLEK----SQLIDAENSNSAVKQALAEAHVIGDVRKYFESKG 506
Query: 473 -DLGR--------------VLVP--PYGIT-------------------------GLVEF 490
DL + +LV PYG T +V+F
Sbjct: 507 VDLTKFTQLKSSNQRDDRVILVKNFPYGTTREELGEMFVPYGKLERLLMPPAGTIAIVQF 566
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
A+AAF L+Y +FK+ +YLE P+ F++ E + EE+ + E +
Sbjct: 567 RDSTSARAAFTKLSYKRFKDGIIYLEKGPKDCFSKPAESDDLIDDTSAEEQQKAVEIKPS 626
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
N E N E EED P +++IKNLNF++T ++ FK
Sbjct: 627 SNDLMETNTDANEESSATHEEDIAEGPT--VSIFIKNLNFSTTNQNLTDRFKAFSGFVVA 684
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK G+ LSMG+GFV+F T+E N + + + +D H+I+LK S+R S+
Sbjct: 685 QVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVISAMDGTVIDGHKIQLKLSHRQ-SSQN 743
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
+ K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF
Sbjct: 744 SNTKTKSN---KRSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGF 797
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
FVEF+ EA+ AM L HL GRRL++++AEE
Sbjct: 798 AFVEFLLPKEAENAMDQL-HGVHLLGRRLIMQYAEE 832
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 143/342 (41%), Gaps = 69/342 (20%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNC 271
++R I+VKN P G +++L F P +P A +A + F+D +
Sbjct: 519 NQRDDRVILVKNFPYGTTREELGEMFVPYGKLERLLMPPAGT------IAIVQFRDSTSA 572
Query: 272 NKALNKNKSFWKGKQLNIY--KYSKDNSAKYSGAADD--NNNASMENIKAKHWK------ 321
A K S+ + K IY K KD +K +DD ++ ++ E KA K
Sbjct: 573 RAAFTK-LSYKRFKDGIIYLEKGPKDCFSK-PAESDDLIDDTSAEEQQKAVEIKPSSNDL 630
Query: 322 -------SQEDSVQFAEDIAE--SGRIFVRNLSYTVTEDDLTKLFEKYGP--LAEV-ILP 369
++E S EDIAE + IF++NL+++ T +LT F+ + +A+V P
Sbjct: 631 METNTDANEESSATHEEDIAEGPTVSIFIKNLNFSTTNQNLTDRFKAFSGFVVAQVKTKP 690
Query: 370 IDKETDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KV 426
K KT GF V F E A +DGTV +DG K+
Sbjct: 691 DPKHQGKTLSMGFGFVEFRTKEQANAVISAMDGTV-------------------IDGHKI 731
Query: 427 HCCISERKLDAFNQVVEARSKRI--ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP---- 480
+S R+ + +KR I+VKNLP+ D+ LF FG L V VP
Sbjct: 732 QLKLSHRQSSQNSNTKTKSNKRSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFD 791
Query: 481 --PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPE 520
G VEFL +A+ A + L L +++A E
Sbjct: 792 KSARGF-AFVEFLLPKEAENAMDQLHGVHLLGRRLIMQYAEE 832
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 44/237 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFK-------------PLPLASVRTTFLGMAYIGFKDEKNCN 272
+I +KNL ++L FK P P +T +G ++ F+ ++ N
Sbjct: 656 SIFIKNLNFSTTNQNLTDRFKAFSGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQAN 715
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+ S G ++ +K +K H +S ++S +
Sbjct: 716 AVI----SAMDGTVIDGHKIQ---------------------LKLSHRQSSQNSNTKTKS 750
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
SG+I V+NL + T D+ +LF +G L V +P K+ DK+ +GFA V FL+P+ A
Sbjct: 751 NKRSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVP--KKFDKSARGFAFVEFLLPKEA 808
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISE-RKLDAFNQVVEARSK 447
A L G LGR LI +E+ N + ++ + RK A N++ R+K
Sbjct: 809 ENAMDQLHGVHLLGR--RLIMQYAEEDAVNAEEEIARMTKKVRKQVATNEMAALRNK 863
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TDV++ G+ RRF FIGY ED A A+DYFN ++V +S+I+V + D P+
Sbjct: 43 ITDVKILRDRNGESRRFGFIGYRNEDDAFDAVDYFNGSFVNTSKIEVAMAKSFADPRVPQ 102
>gi|393219661|gb|EJD05148.1| hypothetical protein FOMMEDRAFT_18782 [Fomitiporia mediterranea
MF3/22]
Length = 828
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 231/842 (27%), Positives = 372/842 (44%), Gaps = 138/842 (16%)
Query: 29 ITQEQLKAKFEEK----GTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
IT LK F +K GT+TDVQ+ T +G+ RRF F+GY E++A+ A +F+ T+V
Sbjct: 13 ITPPLLKQHFSQKDGPGGTLTDVQVAQTPDGRSRRFGFVGYKTEEEARKARGWFDRTFVG 72
Query: 85 SSRIKVE---KCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKP---- 137
+RI VE K + +P + +SA KL P Q K + K
Sbjct: 73 MTRIGVEVVEKGAKDAPIPRPNKKPRIDNSNSAVDKLPGTKPLQKSKSKRKKMDATTSTD 132
Query: 138 ------GKKSKNDPTFSDFLQLHGKDVSKLLPLSNKD-----GEEKEEENEDESN-NQIA 185
GKK K +F+Q+ K +N D G + ++N N I+
Sbjct: 133 DNAESIGKKIKKGAELDEFMQVMQPRTKKERTWANNDDVPVAGPSSRPLEQSQANANGIS 192
Query: 186 HADISD-------------MEYLKLKTK----------------------SKDT------ 204
D S+ ME+++ K K S+D
Sbjct: 193 ETDDSNEREEEDGVEEVDDMEWMRRKMKKDLEEGGEERVFMQDEEEEVPLSQDARSSKLN 252
Query: 205 ---APSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASV 253
AP P + Q + ++NL + +L+A+F +PL +
Sbjct: 253 SEKAPEKADSEPSPTDTIL--QTGRLFLRNLSYTCTQSELEAHFSRFGDIAQVHIPLDPI 310
Query: 254 RTTFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASM 312
+ G+A++ F D KA + +K+ ++G+ L+I ++ S+ G D+ +
Sbjct: 311 SKSSKGLAFVTFSDPACAVKAFEELDKTSFQGRLLHILPAAERKSSGVKGVEDNLGGSGK 370
Query: 313 ENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYG-PLAEVILPID 371
++K + K +++ + + F ++ Y + + + ++ P A+++ P D
Sbjct: 371 TSVKKEKEKKKKEG---------ASKEFNWSMLYMNADAVASSIADRMNIPKADILNP-D 420
Query: 372 KETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCIS 431
E T A+ L H Q + FL E+EG +D +S
Sbjct: 421 SENGDTTSAAVKLALAETHIIQETK-----AFL------------ESEG-IDLSAFSSLS 462
Query: 432 ERKLDAFNQVVEARSKR---IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLV 488
+ R+KR +ILVKN+PY T ++ LFEP G+L RV+VPP G +V
Sbjct: 463 YSSSANSSNSRAVRAKRSDTVILVKNIPYGTTSQQIRELFEPHGELRRVVVPPSGTIAVV 522
Query: 489 EFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEE 548
EF + A F +AY + +YLE AP GVF G N +
Sbjct: 523 EFAHPDDAGRGFRGVAYRRLGGSVVYLEKAPVGVF-------NGSRSSDNTT-----TQA 570
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
+ A++D P +++ +E E P +TL++KNL F +T + + + +
Sbjct: 571 IRPTPAKQDVDIAGP-----IDDAKEEEAPPGSTLFLKNLAFATTSERLTSVLRHLPGFS 625
Query: 609 SVTVARKKDPKS---PGQ---FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS 662
V K DPK PGQ LSMG+GFV F ++++ AL+ +Q +D H + +K +
Sbjct: 626 FARVQTKPDPKRPSIPGQPPPRLSMGFGFVGFTSKDAAKTALRSIQGLVVDGHALSVKFA 685
Query: 663 NRNLESE-ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM 721
R E + SS A +K++V+N+PF+A +S++ LF G LK VRLPKK
Sbjct: 686 GRGTEDQDHDKNNSSSSAKATSKTTKMIVKNLPFEATKSDLRSLFNTHGTLKSVRLPKKF 745
Query: 722 VGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD-NVEDIRKRTNRY 780
+ RG+ F+EF T+ EA+R A+ THL GR LVLEWAE+ +VE +R++
Sbjct: 746 --NSHSRGYAFLEFTTRLEAERVFGAMMH-THLLGRHLVLEWAEDGGRDVEGLRRKAGVG 802
Query: 781 FG 782
FG
Sbjct: 803 FG 804
>gi|346321688|gb|EGX91287.1| pre-rRNA processing protein Mrd1, putative [Cordyceps militaris
CM01]
Length = 849
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 248/513 (48%), Gaps = 94/513 (18%)
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
+D AE IA++ R+FVRNL Y+ TEDDL + FEK+G + EV LPI+ + +KGFA++
Sbjct: 309 QDKDSAAEAIAKTSRLFVRNLPYSATEDDLREEFEKFGGVDEVHLPINAQ-GTSKGFAMM 367
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHC-------CISERK-- 434
F A A+Q LDG+ F GR++H+IP K G D + I ++K
Sbjct: 368 LFTKASDAVAAFQALDGSTFQGRIIHIIPADAKREHGVDDFSMSSLPLKKQNLIRKKKEA 427
Query: 435 -------------LDAFNQVVEAR---SKRIIL--------VKN-LPYRTLPTDLKALF- 468
DA N V AR SK +L VK + ++ + KA F
Sbjct: 428 ASTTFNWNSLYMSQDAVNSSVAARLGVSKSDVLDPTSADAAVKQAIAETSVIQETKAYFA 487
Query: 469 ------EPF-----GDLGRVLVP--PYGIT-------------------------GLVEF 490
+ F GDL +LV PYG T +V+F
Sbjct: 488 ANAVDLDAFKSHKRGDLA-ILVKNFPYGTTMEELRKMFEEFGPVLRVLMPPTGTIAIVQF 546
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
Q N AK AF LAY + K+ L+LE AP+ +F E K
Sbjct: 547 AQANHAKTAFGKLAYRRIKDSVLFLEKAPKDLFT---------------SEAPAVPVAKA 591
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
+ + V ++ ++ EE E E T+L+I+NLNF +T + FK S
Sbjct: 592 NSQPTGTTKLSVSDLLTGGDQAEEEEVE-TTSLFIRNLNFATTTSRLAEVFKALDGFVSA 650
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK PGQ LSMG+GF +F T+ ALKV+ LD+H + +K S++ ++
Sbjct: 651 RVKTKTDPKKPGQVLSMGFGFAEFRTKAQAVAALKVMDGYVLDDHALGVKASHKGNDAAE 710
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
K+ + T +KI+++N+PFQ + ++ LF +G+L+ VR+PKK RGF
Sbjct: 711 ERRKQDKAKKVAATRTKIVIKNLPFQVSKQDIRTLFGTYGQLRSVRVPKK--ADYTSRGF 768
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
F +F+T EA+ A+ AL + THL GRRLVL++
Sbjct: 769 AFADFVTPREAENALNAL-RDTHLLGRRLVLDF 800
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 129/322 (40%), Gaps = 44/322 (13%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKALNK 277
HKR I+VKN P G ++L+ F+ P+ V G +A + F + A K
Sbjct: 499 HKRGDLAILVKNFPYGTTMEELRKMFEEFGPVLRVLMPPTGTIAIVQFAQANHAKTAFGK 558
Query: 278 -NKSFWKGKQLNIYKYSKD---------NSAKYSGAADDNNNASMENIKAKHWKSQEDSV 327
K L + K KD AK + S+ ++ +++E+ V
Sbjct: 559 LAYRRIKDSVLFLEKAPKDLFTSEAPAVPVAKANSQPTGTTKLSVSDLLTGGDQAEEEEV 618
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-------GF 380
E+ +F+RNL++ T L ++F+ V + +TD K GF
Sbjct: 619 -------ETTSLFIRNLNFATTTSRLAEVFKALDGF--VSARVKTKTDPKKPGQVLSMGF 669
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQ 440
F A A + +DG V L G ++GN RK D +
Sbjct: 670 GFAEFRTKAQAVAALKVMDGYVLDDHAL----GVKASHKGN-----DAAEERRKQDKAKK 720
Query: 441 VVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP---PYGITG--LVEFLQKNQ 495
V R+K I++KNLP++ D++ LF +G L V VP Y G +F+ +
Sbjct: 721 VAATRTK--IVIKNLPFQVSKQDIRTLFGTYGQLRSVRVPKKADYTSRGFAFADFVTPRE 778
Query: 496 AKAAFNSLAYTKFKEVPLYLEW 517
A+ A N+L T L L++
Sbjct: 779 AENALNALRDTHLLGRRLVLDF 800
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 24/128 (18%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
VTDV+L RR ++GY + A A+ YFN TYV S+I VE + D+T
Sbjct: 31 VTDVKLMAQ-----RRIGYVGYKSPEDAAKAVKYFNKTYVRMSKITVEPARAISDST--- 82
Query: 104 SWSKYAPDSSAYQKLHNIAPKQDLK--PEHTKDSKPGKKSK-------NDPTFSDFLQLH 154
W+K A +A ++ + P K G K + +DP ++LQ+
Sbjct: 83 -WTK------ANVATRAVATEEGSRALPSTATSEKGGTKKRKREDLDPSDPKLQEYLQVM 135
Query: 155 GKDVSKLL 162
GK L+
Sbjct: 136 GKGRESLV 143
>gi|170048414|ref|XP_001852656.1| multiple RNA-binding domain-containing protein 1 [Culex
quinquefasciatus]
gi|167870541|gb|EDS33924.1| multiple RNA-binding domain-containing protein 1 [Culex
quinquefasciatus]
Length = 537
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 218/399 (54%), Gaps = 34/399 (8%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
T+ +L+ F G VTDVQLKYT EGKFR F F+GY E+QA A+ +FNNT++ +S++
Sbjct: 13 FTESKLRDHFSRCGIVTDVQLKYTPEGKFRNFGFVGYESEEQAAKAIQHFNNTFLRTSKL 72
Query: 89 KVEKCSNLGDTTKPKSWSKYA--PDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPT 146
V C L + + KSWSKY+ P+ S K K+ + T + K+ KNDP
Sbjct: 73 SVAPCVALNEVKELKSWSKYSKKPEESKPAKESGKDKKKKTEQAPTSEDIL-KQRKNDPQ 131
Query: 147 FSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAP 206
F +F+Q+ NK G+ +NQ+ + D + + + +
Sbjct: 132 FKEFVQVQ-----------NKAGK-------SVWDNQLEKDEEEDDSGSEGEDEEETQEH 173
Query: 207 SDPSVPPVSKA-PVHKRQYHTIVVK---NLPAGVKKKDLKAYFKPLPLASVRT--TFLGM 260
+ S A P +R+ + V N+P+ K++DL +FKP+ S+R G
Sbjct: 174 DEQSEGGKGLAKPKKERKITNLFVAKIHNIPSTTKRQDLFRFFKPIKPYSIRIPPKQKGF 233
Query: 261 AYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHW 320
AYIG+K E KAL K+KSF GKQ+ + +++ + + ++ ++ + W
Sbjct: 234 AYIGYKTEAELRKALLKDKSFLGGKQVKVVDFTEKDRMR------GEESSKLDKKENPKW 287
Query: 321 KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGF 380
+++SV +E I E+G++F RNL+Y+V E DL +LFEKYGP++E+ LPID T K KGF
Sbjct: 288 VREKESV-CSESIVETGKLFFRNLAYSVQEQDLKQLFEKYGPVSEIDLPIDANTRKLKGF 346
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
VTFLMPEHA Y L+GT F GRM HL+P K E E
Sbjct: 347 GTVTFLMPEHAVLTYNELNGTFFHGRMFHLLPAKVDEKE 385
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQ 492
+LDAFN V ++RS +IL KNLP T P +L F FG LGRV++PP G+T + L+
Sbjct: 476 QLDAFNGVAKSRSNAVILAKNLPAGTEPAELSERFGKFGLLGRVILPPSGVTEARQILK 534
>gi|296478475|tpg|DAA20590.1| TPA: RNA binding motif protein 19 [Bos taurus]
Length = 825
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 139/295 (47%), Positives = 185/295 (62%), Gaps = 14/295 (4%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP TL +L+ F FG LGRVL+P GIT +VEFL+
Sbjct: 535 LDSFSQAAAERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGITAIVEFLEPL 594
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFA----------EAKEKSKGKEKEKNEEEGEE 544
+A+ AF LAY+KF VPLYLEWAP GVF+ +A + G ++ + E +GE
Sbjct: 595 EARKAFRHLAYSKFHHVPLYLEWAPMGVFSSPIPQKEEPQDAPAEPAGTDRMEPETDGET 654
Query: 545 GEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC 604
E E+ + A D + E EE EE+EE E P TL+IKNLNF++TE++++ F K
Sbjct: 655 PEGEQPTDRAAHDASAKM-EEEEEEEEEEEEESLPGCTLFIKNLNFDTTEETLKGVFSKV 713
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G + S ++++KK+ G LSMG+GFV++ E +ALK LQ +D H++E++ S R
Sbjct: 714 GAVKSCSISKKKN--KAGALLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISER 771
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK 719
+ A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPK
Sbjct: 772 ATKP-ALTSARKKQAPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPK 825
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 106/186 (56%), Gaps = 18/186 (9%)
Query: 234 AGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQL 287
A KK++ + PL ++R G ++ F E+ KAL N+ + G+ +
Sbjct: 264 AAPAKKNVMEFLAPLKPVAIRIVRNAHGNKTGYVFVDFSSEEEVRKALKCNREYMGGRYI 323
Query: 288 NIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESGRIFVRNLSY 346
+++ AK A ++N AK W+ + + ED+A+SGR+FVRNL Y
Sbjct: 324 EVFRERNIPVAK----------APLKN-GAKPWQGRTLGEHEEEEDLADSGRLFVRNLPY 372
Query: 347 TVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGR 406
T +E+DL KLF +YGP++E+ PID T K KGFA VTF+ PEHA +AY +DG VF GR
Sbjct: 373 TSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGR 432
Query: 407 MLHLIP 412
MLH++P
Sbjct: 433 MLHVLP 438
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 37/156 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + I K+ +K + GF V + PE A +
Sbjct: 692 LFIKNLNFDTTEETLKGVFSKVGAVKSC--SISKKKNKAGALLSMGFGFVEYRKPEQAQK 749
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER + AR K+
Sbjct: 750 ALKQLQGHV-------------------VDGHKLEVRISERATKP--ALTSARKKQAPRK 788
Query: 450 -----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP 480
ILV+N+P++ +++ LF FG+L V +P
Sbjct: 789 QTTSKILVRNIPFQADSREIRELFSTFGELKTVRLP 824
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQTAL 59
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM--VGSGLHRGFGFVEFITKNEAK 742
G + ++N+ F + ++ +F G +K + KK G+ L GFGFVE+ +A+
Sbjct: 689 GCTLFIKNLNFDTTEETLKGVFSKVGAVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQ 748
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEA 767
+A+K L Q + G +L + +E A
Sbjct: 749 KALKQL-QGHVVDGHKLEVRISERA 772
>gi|406607411|emb|CCH41202.1| Multiple RNA-binding domain-containing protein 1 [Wickerhamomyces
ciferrii]
Length = 861
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/364 (38%), Positives = 208/364 (57%), Gaps = 24/364 (6%)
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
E +V G V + +D + R IIL+KN P+ T +L LF PFG + R++
Sbjct: 485 EAHVIGDVRKFFENKGIDLTKFQDKERDDSIILIKNFPFGTTEAELLELFTPFGPVKRII 544
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN 538
+PP G +++F ++AF L Y +FK+ LYLE P+ +F +E
Sbjct: 545 MPPSGTIAIIQFRDLPSGRSAFTKLCYRRFKKGILYLEKGPKDLFT----------REPE 594
Query: 539 EEEGEEGEEEKKENTAE-EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSI 597
+E E KE+ E +DN + + E +E V+EDE+ P ++++KNLNFN+T +
Sbjct: 595 SDEIANNSETPKEDVKEVKDNARDIME-DEQVQEDEDIFEGPTVSIFVKNLNFNTTSSQL 653
Query: 598 RRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQI 657
F+K T+ K DP+ + SMG+GFV+F T+E N A+ L N+ LD H++
Sbjct: 654 TSVFEKLTGFVVATIKTKPDPRDSSKTQSMGFGFVEFKTKEQANIAISTLDNTVLDGHKL 713
Query: 658 ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
+LK S+R VK+ S+N K SKI+V+N+PF+A + +V ELF +FG+LK VR+
Sbjct: 714 QLKLSHRQ-----NVVKKTSTN--KAVSSKIIVKNLPFEASRKDVFELFNSFGQLKSVRV 766
Query: 718 PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE-ADNVE-DIRK 775
PKK S RGF FVEF+ EA+ AM L Q HL GRRLV+++AE+ +D+VE +I K
Sbjct: 767 PKKFDKSA--RGFAFVEFLIPKEAQSAMDQL-QGVHLLGRRLVMQYAEQGSDDVEAEIEK 823
Query: 776 RTNR 779
T +
Sbjct: 824 MTKK 827
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I +GR+F+RNL Y+ E++ +LF KYG L EV + ID T ++KGFA + F+ P+ A
Sbjct: 327 IRTTGRLFLRNLLYSSKEEEFRELFSKYGELEEVHIAIDTRTGQSKGFAYIQFVNPDDAV 386
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN 418
QAY D +F GR+LH++PG K+N
Sbjct: 387 QAYIEQDKQIFQGRLLHILPGDSKKN 412
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 159/371 (42%), Gaps = 47/371 (12%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKALNK-- 277
R I++KN P G + +L F P P+ + G +A I F+D + A K
Sbjct: 511 RDDSIILIKNFPFGTTEAELLELFTPFGPVKRIIMPPSGTIAIIQFRDLPSGRSAFTKLC 570
Query: 278 NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKS------QEDSVQFAE 331
+ F KG L + K KD + + + NN+ K K +++ VQ E
Sbjct: 571 YRRFKKG-ILYLEKGPKDLFTREPESDEIANNSETPKEDVKEVKDNARDIMEDEQVQEDE 629
Query: 332 DIAE--SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKETDKTKGFALVT 384
DI E + IFV+NL++ T LT +FEK + P D ++ GF V
Sbjct: 630 DIFEGPTVSIFVKNLNFNTTSSQLTSVFEKLTGFVVATIKTKPDPRDSSKTQSMGFGFVE 689
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEA 444
F E A A LD TV G L L K+ + K + N+ V +
Sbjct: 690 FKTKEQANIAISTLDNTVLDGHKLQL--------------KLSHRQNVVKKTSTNKAVSS 735
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKA 498
+ I+VKNLP+ D+ LF FG L V VP G VEFL +A++
Sbjct: 736 K----IIVKNLPFEASRKDVFELFNSFGQLKSVRVPKKFDKSARGF-AFVEFLIPKEAQS 790
Query: 499 AFNSLAYTKFKEVPLYLEWAPEG---VFAEAKEKSKGKEKE-KNEEEGEEGEEEKKENTA 554
A + L L +++A +G V AE ++ +K +K+ ++ G K++
Sbjct: 791 AMDQLQGVHLLGRRLVMQYAEQGSDDVEAEIEKMTKKVKKQVATQQLGALRLNGKRKLDL 850
Query: 555 EEDNQQGVPEV 565
E+D+++GV +
Sbjct: 851 EDDDEEGVDNI 861
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+L+ F +KG +TDV+L+ G+ RRFAFIG+ R++ A+ A+ YFN +++ +++I
Sbjct: 13 LDEEKLRDHFAKKGDITDVKLRKNRAGESRRFAFIGFKRQEDAEEAVRYFNGSFIDTAKI 72
Query: 89 KVEKCSNLGDTTKPKSW 105
+V + D + PKS+
Sbjct: 73 EVSIAKSFVDPSVPKSF 89
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+T ++ +RN+ + +K+ E ELF +GEL+ V + +G +GF +++F+ ++A
Sbjct: 328 RTTGRLFLRNLLYSSKEEEFRELFSKYGELEEVHIAID-TRTGQSKGFAYIQFVNPDDAV 386
Query: 743 RAMKALCQSTHLYGRRLV 760
+A + Q ++ RL+
Sbjct: 387 QAY--IEQDKQIFQGRLL 402
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 80/213 (37%), Gaps = 39/213 (18%)
Query: 325 DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVT 384
D +F + + I ++N + TE +L +LF +GP+ +I+P + A++
Sbjct: 502 DLTKFQDKERDDSIILIKNFPFGTTEAELLELFTPFGPVKRIIMP------PSGTIAIIQ 555
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPG-------------------KPKENEGNVDGK 425
F A+ L F +L+L G PKE+ V
Sbjct: 556 FRDLPSGRSAFTKLCYRRFKKGILYLEKGPKDLFTREPESDEIANNSETPKEDVKEVKDN 615
Query: 426 VHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGD--LGRVLVPP-- 481
+ + ++ + E + I VKNL + T + L ++FE + + P
Sbjct: 616 ARDIMEDEQVQEDEDIFEGPTVS-IFVKNLNFNTTSSQLTSVFEKLTGFVVATIKTKPDP 674
Query: 482 --------YGITGLVEFLQKNQAKAAFNSLAYT 506
G G VEF K QA A ++L T
Sbjct: 675 RDSSKTQSMGF-GFVEFKTKEQANIAISTLDNT 706
>gi|328865472|gb|EGG13858.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 868
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 208/360 (57%), Gaps = 25/360 (6%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS IILVKN+P++T +L+ +F +G+L RV++PP LVEF N+AKA+F LA
Sbjct: 507 RSNSIILVKNIPHKTTIGELEEMFGRYGELARVILPPARTMALVEFYHVNEAKASFRGLA 566
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y+KF VPL+LEWAP GVF A +K + K+K E+E E+ E+ K EN +
Sbjct: 567 YSKFHTVPLFLEWAPVGVFKTAAP-TKEQIKQKQEKETEQLEKIKVENESTSSTSATTTT 625
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
E+ +P +YIKN++F++T+D ++ FKK +V ++ + DP
Sbjct: 626 TTTTAIA-EQVDPSKSFYVYIKNISFDTTDDMLKERFKKIRDFMTVNISTRMDPIRGK-- 682
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES----------EATTVK 674
LS G+GF QF T+ + +K + +D H++ +K S N + + + K
Sbjct: 683 LSCGFGFAQFSTKHGAYECIKKWNGALVDGHELSIKLSTSNAATGTDGKASNSANSASNK 742
Query: 675 RKSSNVAKQT--------GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 726
R+ +++ +KI ++NI F+ K E+ +LF +GELK VRLP K G
Sbjct: 743 REDRLKDEESKRHDKGFVSTKISIKNIAFECKPIEIRKLFTTYGELKSVRLPSKPTGG-- 800
Query: 727 HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTAVG 786
HRGFGFVE++T+ EAK AM+AL Q++HLYGR L+L +AEE N+E +R++ + + A G
Sbjct: 801 HRGFGFVEYLTEQEAKNAMEAL-QNSHLYGRHLILSFAEEDKNIEQLREKASVDYSKASG 859
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 72/107 (67%), Gaps = 3/107 (2%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
EDI ESGR+F+RNLSYT TEDD+ K FE +G L+EV +PID+++ K+KG A V F++PE
Sbjct: 318 EDIGESGRLFIRNLSYTTTEDDIKKFFEAHGKLSEVYIPIDRDSKKSKGIAFVLFMIPEQ 377
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGK---PKENEGNVDGKVHCCISERK 434
A +A LDG GR++H++ K KE + N DG+ ++K
Sbjct: 378 AMRAANDLDGKTLQGRIIHILAAKNAPSKEVQLNKDGEKTSSFKQQK 424
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ + +L+ F + GTVTD ++ T +G+ R F FIG+ ++ A+ +L Y N +Y +S+I
Sbjct: 13 VDENKLRHHFSKFGTVTDCKIARTQDGRSRLFGFIGFSSDEHAEKSLMY-NGSYFHTSKI 71
Query: 89 KVEKCSNLGDTTKP-KSWSKYAPDSSAYQKL 118
VE + D+ ++WSKY SSA ++
Sbjct: 72 VVEMAFSKDDSKDVHRAWSKYTQGSSANNRI 102
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 666 LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 725
L+ E +++ ++ S ILV+NIP + E+EE+F +GEL V LP
Sbjct: 490 LQEEGVVIEKIGGKGIDRSNSIILVKNIPHKTTIGELEEMFGRYGELARVILPPA----- 544
Query: 726 LHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
R VEF NEAK + + L S + L LEWA
Sbjct: 545 --RTMALVEFYHVNEAKASFRGLAYS-KFHTVPLFLEWA 580
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK---GFALVTFLMP 388
D ++S ++++N+S+ T+D L + F+K V + + + K GF F
Sbjct: 636 DPSKSFYVYIKNISFDTTDDMLKERFKKIRDFMTVNISTRMDPIRGKLSCGFGFAQFSTK 695
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
A + + +G + G L + G DGK + +++ + SKR
Sbjct: 696 HGAYECIKKWNGALVDGHELSIKLSTSNAATG-TDGKASNSANSASNKREDRLKDEESKR 754
Query: 449 --------IILVKNLPYRTLPTDLKALFEPFGDLGRVLVP--PYGIT---GLVEFLQKNQ 495
I +KN+ + P +++ LF +G+L V +P P G G VE+L + +
Sbjct: 755 HDKGFVSTKISIKNIAFECKPIEIRKLFTTYGELKSVRLPSKPTGGHRGFGFVEYLTEQE 814
Query: 496 AKAAFNSLAYTKFKEVPLYLEWAPE 520
AK A +L + L L +A E
Sbjct: 815 AKNAMEALQNSHLYGRHLILSFAEE 839
>gi|428175786|gb|EKX44674.1| hypothetical protein GUITHDRAFT_109452 [Guillardia theta CCMP2712]
Length = 895
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 209/358 (58%), Gaps = 39/358 (10%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS +LVKN+P+ T +L+ LFE FGD+ ++P +V+F ++A+ AF SLA
Sbjct: 503 RSNTAMLVKNIPFSTTLQELRELFERFGDVSHAVLPKTKTMAIVDFTHPSEARKAFKSLA 562
Query: 505 YTKFKEVPLYLEWAPEGVF---AEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQG 561
Y++FK P+YLEWAP +F A GK++ K E EEG+ ++ +++ QQ
Sbjct: 563 YSQFKHQPIYLEWAPVDIFLPGAPTLSSEGGKKQPKAVE--EEGKTQEGGKAGKQEKQQ- 619
Query: 562 VPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSI-RRHFKKCGPIASVTVARK---- 615
EE+ PE TLY+KNLNF +TE+++ + G + +V + K
Sbjct: 620 -----------EEKSPEGSGRTLYVKNLNFKTTEEALKGKMEGGGGEVKAVRIVTKPNPK 668
Query: 616 --KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR-NLESEATT 672
KD K P + LSMGYGFV+F + N+AL+ LQ + LD H ++LK S+R + +S A
Sbjct: 669 AGKDSKEPSR-LSMGYGFVEFKRSKDANEALRKLQGTKLDGHVLQLKMSSRVSADSSAGE 727
Query: 673 V---------KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG 723
V + S + A Q SK+++RN+PF+A + E+ +L +FGEL +RLP K G
Sbjct: 728 VDVTKDNRSRAKPSDSQAPQDCSKLVIRNVPFEANKKELRDLLSSFGELTSLRLPSKFDG 787
Query: 724 SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
S HRGF F EF+T EA A A +THLYGR LV+EWAEE ++E +R++T RYF
Sbjct: 788 S--HRGFAFAEFVTHQEAAAAKDA-LGATHLYGRHLVIEWAEEEQSLEAVRRKTARYF 842
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 7/106 (6%)
Query: 54 EGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYAPDSS 113
+GK R F F+G+ E A AL YF +TY+ +S+I VE +GD++ + WSKY+ SS
Sbjct: 15 DGKSRNFGFVGFKSEKDAHKALKYFQDTYIDTSKITVEFAKPVGDSSLSRPWSKYSEGSS 74
Query: 114 AYQKLHNIAPKQDL-----KPEH--TKDSKPGKKSKNDPTFSDFLQ 152
A+ ++ D+ KPE +K+++ +K+K DP F++
Sbjct: 75 AHDRVTKKHSSADVSENPTKPEKKLSKEAQLLQKAKTDPEMKAFVE 120
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
GR+FVRNL Y+ +E++LT F K+G L+EV + I T + G A + FL+P A
Sbjct: 326 GRLFVRNLPYSTSEEELTAFFSKFGELSEVHICIHNITKEPTGMAFILFLIPSDA 380
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 57/213 (26%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V+N+ ++ T +L +LFE++G ++ +LP KTK A+V F P A +A++ L
Sbjct: 508 MLVKNIPFSTTLQELRELFERFGDVSHAVLP------KTKTMAIVDFTHPSEARKAFKSL 561
Query: 399 DGTVFLGRMLHL--------IPGKP------------------KENEGNVDGKVHCCISE 432
+ F + ++L +PG P K EG GK E
Sbjct: 562 AYSQFKHQPIYLEWAPVDIFLPGAPTLSSEGGKKQPKAVEEEGKTQEGGKAGKQEKQQEE 621
Query: 433 RKLDAFNQVVEARSKRIILVKNLPYRTLPTDL--------------KALFEPFGDLGRVL 478
+ + S R + VKNL ++T L + + +P G+
Sbjct: 622 KSPEG--------SGRTLYVKNLNFKTTEEALKGKMEGGGGEVKAVRIVTKPNPKAGKDS 673
Query: 479 VPPYGIT---GLVEFLQKNQAKAAFNSLAYTKF 508
P ++ G VEF + A A L TK
Sbjct: 674 KEPSRLSMGYGFVEFKRSKDANEALRKLQGTKL 706
>gi|410075077|ref|XP_003955121.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
gi|372461703|emb|CCF55986.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
Length = 850
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 250/519 (48%), Gaps = 91/519 (17%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I E+GR+F+RN+ YT TEDD LF K+G L E+ + +D T ++KGFA V F P+
Sbjct: 303 EKIQETGRLFLRNILYTSTEDDFKALFGKFGELEEIHVALDTRTGQSKGFAYVLFKNPQD 362
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENE--GNVDGKVHCCISERKL------------- 435
A QAY LD +F GR+LH++P + K++ + D K +R+L
Sbjct: 363 AVQAYIELDKQIFQGRLLHILPAESKKDHRLDDFDLKNMPLKKQRELKRKANASKSTFSW 422
Query: 436 -------DAF------------NQVVEARSKRIILVKNLPYRTLPTDLKALFE------- 469
DA + +++A S + + L + D++ FE
Sbjct: 423 NALYMNQDAVLSSVAAKLGMEKSDLIDAESSGAAVKQALAEAHVINDVRKFFEEKGVNLL 482
Query: 470 PFGDLGR--------VLVP--PYGIT-------------------------GLVEFLQKN 494
F DL R +LV PYG T +V++
Sbjct: 483 KFQDLKRPDQRDDRVILVKNFPYGTTTEEIGELFLPFGKIERLVMPPAGTIAIVQYRDIT 542
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
A+AAF LA+ +FK+ +YLE P+ F + E K E +E K +
Sbjct: 543 SARAAFTKLAFKRFKDGIIYLEKGPKDCFNKDAEVDASINK-----ADAEAKEAKVAKPS 597
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
D +G N +D+ P +++IKNLNF++T + F + V
Sbjct: 598 SHDVMEGTTNEVSNESQDDVING-PTVSVFIKNLNFSTTSAQLNDKFSQFSGFVIAQVKT 656
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K D K PG+ +SMG+GFV+F T+E N + L + +D H+I+LK S+R T
Sbjct: 657 KPDSKHPGKTVSMGFGFVEFRTKEQANAVIAALDGTVIDGHKIQLKLSHR-----TTASN 711
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
++ KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF FVE
Sbjct: 712 TTTTKKKGVKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGFAFVE 769
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEE-ADNVED 772
F+ EA+ AM L Q HL GRRLV+++A++ A+N E+
Sbjct: 770 FLLPKEAEAAMDQL-QGVHLLGRRLVMQYAQQDAENAEE 807
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 129/341 (37%), Gaps = 73/341 (21%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKP--------LP------------LASVRTTFLGM 260
+R I+VKN P G +++ F P +P + S R F +
Sbjct: 492 QRDDRVILVKNFPYGTTTEEIGELFLPFGKIERLVMPPAGTIAIVQYRDITSARAAFTKL 551
Query: 261 AYIGFKD--------EKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASM 312
A+ FKD K+C F K +++ D AK + A +++ M
Sbjct: 552 AFKRFKDGIIYLEKGPKDC---------FNKDAEVDASINKADAEAKEAKVAKPSSHDVM 602
Query: 313 ENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGP--LAEV-ILP 369
E + +D V ++ +F++NL+++ T L F ++ +A+V P
Sbjct: 603 EGTTNEVSNESQDDVINGPTVS----VFIKNLNFSTTSAQLNDKFSQFSGFVIAQVKTKP 658
Query: 370 IDKETDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVH 427
K KT GF V F E A LDGTV G K+
Sbjct: 659 DSKHPGKTVSMGFGFVEFRTKEQANAVIAALDGTVIDGH------------------KIQ 700
Query: 428 CCISERKLDAFNQVVEARSKRI--ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP----- 480
+S R + + + + I+VKNLP+ D+ LF FG L V VP
Sbjct: 701 LKLSHRTTASNTTTTKKKGVKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDK 760
Query: 481 -PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPE 520
G VEFL +A+AA + L L +++A +
Sbjct: 761 SARGF-AFVEFLLPKEAEAAMDQLQGVHLLGRRLVMQYAQQ 800
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TDV++ +G R+FAFIGY E A A+ Y++ +++++++I V + + D P+
Sbjct: 40 ITDVKILRDKDGNSRKFAFIGYRNESDALDAIRYYDGSFIYTAKISVSEAKSFADPNVPR 99
Query: 104 SWSKYAPDSSAYQKLHNI---------APKQDLKPEHTKDSKPGKKSKNDPTFSDFLQLH 154
S + + A ++L A KQ + +K+K F + ++
Sbjct: 100 SMKEKKRE--ALKRLREREEKLLTEKNAKKQKKQERRNSIDNEIEKNKQLQEFIETMKPS 157
Query: 155 GKDVSKLLPLSNKDGEEKEEE------------NEDESNNQIAHADISDMEYLKL 197
K S +N E++ EE ++DE+ N IA D SD EY+ L
Sbjct: 158 AKVASWEATSTNAVTEQEGEEVNPLLAHALAMKSDDENENDIASGDNSDDEYVDL 212
>gi|400603073|gb|EJP70671.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 850
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 167/508 (32%), Positives = 246/508 (48%), Gaps = 95/508 (18%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
AE I+++ R+FVRNL Y+ TEDDL + FEK+G + E+ LPI+ + KGFA++ F P
Sbjct: 314 AEAISKTSRLFVRNLPYSATEDDLREEFEKFGGVDEIHLPINAQ-GTAKGFAMLLFTKPS 372
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEG-------NVDGKVHCCISERK-------- 434
A A+ LDG F GR++H+IP K G N+ K I +K
Sbjct: 373 DAVAAFHALDGATFQGRIIHIIPADAKREHGVDDFSLSNLPLKKQNLIRRKKEASSTTFN 432
Query: 435 -------LDAFNQVVEAR---SKRIIL--------VKN-LPYRTLPTDLKALFE------ 469
DA N V AR SK +L VK + ++ + KA F
Sbjct: 433 WNSLYMSQDAVNSSVAARLGVSKSEVLDPTSADAAVKQAIAETSVIQETKAYFAANGVDL 492
Query: 470 ------------------PFG-----------DLGRVL---VPPYGITGLVEFLQKNQAK 497
PFG + G VL +PP G +V+F Q N AK
Sbjct: 493 DAFKSHKRGDTAILVKNFPFGTTMEELRKLFEEFGPVLRVLMPPAGTIAIVQFAQANHAK 552
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEED 557
+AF LAY + K+ L+LE AP+ +F +E + + TA
Sbjct: 553 SAFGKLAYRRIKDSVLFLEKAPKDLFT-------------SEAAAVSAAKANSQPTAT-- 597
Query: 558 NQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
+ V ++ + E E T+L+I+NLNF++T + F+ S V K D
Sbjct: 598 TKLSVSDLLTGGGDKAEEEEVETTSLFIRNLNFDTTTSRLAEAFQALDGFVSARVKTKMD 657
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
PK PGQ LSMG+GF +F T+ ALK + LD H + +K S++ ++A +RK
Sbjct: 658 PKKPGQILSMGFGFAEFRTKAQAQAALKAMDGHVLDGHALTVKASHKG--NDAAEERRKE 715
Query: 678 SNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
K +K++++N+PFQA + ++ LF +G+L+ VR+PKK S RGF F +F
Sbjct: 716 DRAKKVAAKRTKVVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADSSS--RGFAFADF 773
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEW 763
+T EA+ A+ AL + THL GRRLVL++
Sbjct: 774 VTPREAENALNAL-RDTHLLGRRLVLDF 800
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 125/318 (39%), Gaps = 35/318 (11%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKALNK 277
HKR I+VKN P G ++L+ F+ P+ V G +A + F + A K
Sbjct: 498 HKRGDTAILVKNFPFGTTMEELRKLFEEFGPVLRVLMPPAGTIAIVQFAQANHAKSAFGK 557
Query: 278 -NKSFWKGKQLNIYKYSKD--NSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
K L + K KD S + +A N+ K S D + D A
Sbjct: 558 LAYRRIKDSVLFLEKAPKDLFTSEAAAVSAAKANSQPTATTKL----SVSDLLTGGGDKA 613
Query: 335 -----ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVT 384
E+ +F+RNL++ T L + F+ + + K + GF
Sbjct: 614 EEEEVETTSLFIRNLNFDTTTSRLAEAFQALDGFVSARVKTKMDPKKPGQILSMGFGFAE 673
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEA 444
F A A + +DG V G L + ++GN RK D +V
Sbjct: 674 FRTKAQAQAALKAMDGHVLDGHALTV----KASHKGN-----DAAEERRKEDRAKKVAAK 724
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAA 499
R+K +++KNLP++ D++ LF +G L V VP + +F+ +A+ A
Sbjct: 725 RTK--VVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADSSSRGFAFADFVTPREAENA 782
Query: 500 FNSLAYTKFKEVPLYLEW 517
N+L T L L++
Sbjct: 783 LNALRDTHLLGRRLVLDF 800
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 30/167 (17%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVE---KCSNLGDTT 100
VTDV+L RR ++GY + A A+ YFN TY+ S+I VE SN T
Sbjct: 31 VTDVKLMAQ-----RRIGYVGYKSAEDAAKAVKYFNKTYIRMSKIGVEPARAISNPASTK 85
Query: 101 KPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQLHGKDVSK 160
P + AP+ A + L + A +D +K K ++D ++L++ G
Sbjct: 86 APVATQTGAPE-KATKVLSSAASVED----GSKKRKREDLDQSDHKLQEYLRVMGTGRES 140
Query: 161 LLPLSNKDGEEKEEENEDESNNQIAHADI-------SDMEYLKLKTK 200
L+ E ES+ +A D SD EY+++ ++
Sbjct: 141 LVA----------NETAVESSGALAQLDSALVPDGESDDEYVQVPSR 177
>gi|390596289|gb|EIN05691.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 779
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 203/367 (55%), Gaps = 26/367 (7%)
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
E +V + + + +D + ARS IILVKN+PY T D++ALFEP GDL RVL
Sbjct: 415 ETHVISETKAYLESQGVDLASFAQPARSDTIILVKNIPYGTSADDIRALFEPHGDLTRVL 474
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN 538
VPP G +VEF Q ++ + AF ++AY + +YLE PEG+F GK +
Sbjct: 475 VPPAGTMAVVEFAQPDETRKAFKAVAYRRMGNSIIYLERGPEGMFT-------GKVPSEE 527
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIR 598
E G +E + EED EE TTL++KNL F++T + +
Sbjct: 528 EANGALAKEPVRIEEPEEDAA------------GEELSLAAGTTLFVKNLAFSTTSERLT 575
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
+ + A V K DPK+P LSMGYGFV F +ES + +K LQ + +D H +
Sbjct: 576 QLLRHLPSFAFARVQTKPDPKNPNGRLSMGYGFVGFKDKESAKKGMKSLQGTVVDGHALS 635
Query: 659 LKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP 718
+K + R + + + AK +K++V+N+PF+A + ++ ELF A G+LK VRLP
Sbjct: 636 VKWAGRGQDEKEGK---EGEGKAKARTTKMIVKNVPFEATKKDIRELFGAHGQLKSVRLP 692
Query: 719 KKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD-NVEDIRKRT 777
KK RGF F++F++++EA+ A +AL + THL GR LVLEWA E D +VE +RK+
Sbjct: 693 KKF--DHRSRGFAFLDFVSRHEAENAYEAL-KHTHLLGRHLVLEWASEEDVDVEALRKKA 749
Query: 778 NRYFGTA 784
+G+
Sbjct: 750 GVGYGSG 756
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 138/328 (42%), Gaps = 35/328 (10%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKALNKNK 279
R I+VKN+P G D++A F+P L V G MA + F KA K
Sbjct: 441 RSDTIILVKNIPYGTSADDIRALFEPHGDLTRVLVPPAGTMAVVEFAQPDETRKAF-KAV 499
Query: 280 SFWKGKQLNIYKYSKDNSAKYSG--AADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG 337
++ + IY + ++G +++ N ++ + + +ED+ +A
Sbjct: 500 AYRRMGNSIIY-LERGPEGMFTGKVPSEEEANGALAKEPVRIEEPEEDAAGEELSLAAGT 558
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKETDKTKGFALVTFLMPEHAT 392
+FV+NL+++ T + LT+L A + P + + G+ V F E A
Sbjct: 559 TLFVKNLAFSTTSERLTQLLRHLPSFAFARVQTKPDPKNPNGRLSMGYGFVGFKDKESAK 618
Query: 393 QAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
+ + L GTV G L + G+ ++ + +G+ K+ +
Sbjct: 619 KGMKSLQGTVVDGHALSVKWAGRGQDEKEGKEGEGKAKARTTKM---------------I 663
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAY 505
VKN+P+ D++ LF G L V +P G ++F+ +++A+ A+ +L +
Sbjct: 664 VKNVPFEATKKDIRELFGAHGQLKSVRLPKKFDHRSRGF-AFLDFVSRHEAENAYEALKH 722
Query: 506 TKFKEVPLYLEWAP-EGVFAEAKEKSKG 532
T L LEWA E V EA K G
Sbjct: 723 THLLGRHLVLEWASEEDVDVEALRKKAG 750
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 29 ITQEQLKAKFEEKG----TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
+T ++L+ F++KG T+TD ++ ++G RRF FIG+ + +A AA D+F+ T++
Sbjct: 13 VTPDRLREYFQQKGAPSGTITDAKVAQKSDGTSRRFGFIGFKTDAEAAAARDWFDRTFLD 72
Query: 85 SSRIKVEKCSNLGDTTKPK 103
SSRI V+ D P+
Sbjct: 73 SSRIAVQIVQGAKDAPAPR 91
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 85/220 (38%), Gaps = 32/220 (14%)
Query: 325 DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVT 384
D FA+ I V+N+ Y + DD+ LFE +G L V++P A+V
Sbjct: 432 DLASFAQPARSDTIILVKNIPYGTSADDIRALFEPHGDLTRVLVP------PAGTMAVVE 485
Query: 385 FLMPEHATQAYQHL------DGTVFLGRMLH-LIPGK-PKENEGN-VDGKVHCCISERKL 435
F P+ +A++ + + ++L R + GK P E E N K I E +
Sbjct: 486 FAQPDETRKAFKAVAYRRMGNSIIYLERGPEGMFTGKVPSEEEANGALAKEPVRIEEPEE 545
Query: 436 DAFNQVVEARSKRIILVKNLPYRTLPTDLKALFE--PFGDLGRVLVPP------------ 481
DA + + + + VKNL + T L L P RV P
Sbjct: 546 DAAGEELSLAAGTTLFVKNLAFSTTSERLTQLLRHLPSFAFARVQTKPDPKNPNGRLSMG 605
Query: 482 YGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEG 521
YG G F K AK SL T L ++WA G
Sbjct: 606 YGFVG---FKDKESAKKGMKSLQGTVVDGHALSVKWAGRG 642
>gi|66809481|ref|XP_638463.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996868|sp|Q54PB2.1|MRD1_DICDI RecName: Full=Multiple RNA-binding domain-containing protein 1;
AltName: Full=RNA-binding motif protein 19 homolog;
AltName: Full=RNA-binding protein 19 homolog
gi|60467060|gb|EAL65101.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 895
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/349 (37%), Positives = 207/349 (59%), Gaps = 29/349 (8%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS ++LVKN+P++T +L LF FG+L RV++ P L+E++ N+AK F +LA
Sbjct: 550 RSNTVLLVKNIPFKTQEHELHELFSKFGELSRVVLSPARTIALIEYIHPNEAKVGFKNLA 609
Query: 505 YTKFKEVPLYLEWAPEGVF---AEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQG 561
Y+KF VPLYLEWAPEGVF A KE K ++ EK+ + + +E +
Sbjct: 610 YSKFHHVPLYLEWAPEGVFKLPAPPKEIKKSEKSEKSSDSSNDKKEVESTTKTAATTTTT 669
Query: 562 VPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
+ N + +YIKNLN+ +T +++ FK +V +A K +PK+P
Sbjct: 670 KKGTDNNTQ-----------FVYIKNLNWKTTNETLVGKFKSLKDYVNVNIATKANPKNP 718
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK----- 676
+ L G+GF++F +++ + +K L SS+D ++I LK S++N + KR+
Sbjct: 719 SERLPCGFGFIEFSSKQGAYECIKKLNGSSIDGYEISLKLSDKNETNVQEINKRRELPEN 778
Query: 677 SSNVAKQTG-------SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
S K G SKI+++N+PF++ E+ +LF A+GE++ VR+PKK +G HRG
Sbjct: 779 SKQSIKSNGGQPNKPSSKIIIKNLPFESTIKEIRKLFTAYGEIQSVRIPKK--PNGGHRG 836
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTN 778
FGFVEF+T+ EAK AM+AL S H YGR LVL++AE+ N++++R++ N
Sbjct: 837 FGFVEFLTEEEAKNAMEALGNS-HFYGRHLVLQYAEQDKNIDELREKAN 884
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 69/92 (75%)
Query: 323 QEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFAL 382
+ D + ED+ ESGRIFVRNLSY+ E+DL K+F K+G ++E+ +PID ++ K+KG A
Sbjct: 347 EHDYTKEDEDVGESGRIFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAF 406
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGK 414
+ +L+PE+A QA +DG VF GR++H++PGK
Sbjct: 407 ILYLIPENAVQALNDMDGKVFQGRLIHVLPGK 438
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 132/329 (40%), Gaps = 76/329 (23%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNS 502
I V+NL Y T DL+ +F FG + + +P GI ++ + +N A A N
Sbjct: 363 IFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPEN-AVQALND 421
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGE----EGEEEKKENTAEEDN 558
+ F+ +++ P G A AK+ S+ K+ N EG + E+E+K+ T
Sbjct: 422 MDGKVFQGRLIHV--LP-GKAAPAKQFSENKDNNNNGAEGGSSSFKAEKEQKQKTTSGST 478
Query: 559 QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
N+N+ F + I S R K
Sbjct: 479 H-----------------------------NWNAL-------FMRSDAIVSSLAERYK-- 500
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSS 678
+ GQ L NQ ++ + ++ H I + + LE + ++ +
Sbjct: 501 MTQGQLLDP-------------NQMDLAVRMTLMETHVIN--ETKKFLEDQGVIIQDIGN 545
Query: 679 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
+K++ + +LV+NIPF+ ++ E+ ELF FGEL V L R +E+I
Sbjct: 546 KGSKRSNTVLLVKNIPFKTQEHELHELFSKFGELSRVVLSPA-------RTIALIEYIHP 598
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAEEA 767
NEAK K L S + L LEWA E
Sbjct: 599 NEAKVGFKNLAYSK-FHHVPLYLEWAPEG 626
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T ++ K FE+ GTVTD ++ +GK R F FIG+ E A+ AL N T++ +S+I
Sbjct: 15 LTDKRFKEHFEKFGTVTDAKI-IKKDGKSRLFGFIGFSTEQSAKNALS-LNGTFIDTSKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKL 118
VE + +TT+ + WSKY+ SS+ ++L
Sbjct: 73 VVETATVASETTENRPWSKYSIGSSSNKRL 102
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 138/366 (37%), Gaps = 80/366 (21%)
Query: 324 EDSVQFAEDIAESGR------IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
ED +DI G + V+N+ + E +L +LF K+G L+ V+L
Sbjct: 534 EDQGVIIQDIGNKGSKRSNTVLLVKNIPFKTQEHELHELFSKFGELSRVVL------SPA 587
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL---------IPGKP-----------KE 417
+ AL+ ++ P A +++L + F L+L +P P
Sbjct: 588 RTIALIEYIHPNEAKVGFKNLAYSKFHHVPLYLEWAPEGVFKLPAPPKEIKKSEKSEKSS 647
Query: 418 NEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRV 477
+ N +V + + + + +KNL ++T L F+ D V
Sbjct: 648 DSSNDKKEVESTTKTAATTTTTKKGTDNNTQFVYIKNLNWKTTNETLVGKFKSLKDYVNV 707
Query: 478 LVP------------PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE 525
+ P G G +EF K A L + + L+ +
Sbjct: 708 NIATKANPKNPSERLPCGF-GFIEFSSKQGAYECIKKLNGSSIDGYEISLKLS------- 759
Query: 526 AKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE-VEENVEEDEEREPEPDTTLY 584
+KNE N E + ++ +PE +++++ + + +P + +
Sbjct: 760 ----------DKNE-----------TNVQEINKRRELPENSKQSIKSNGGQPNKPSSKII 798
Query: 585 IKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
IKNL F ST IR+ F G I SV + PK P G+GFV+F T E A+
Sbjct: 799 IKNLPFESTIKEIRKLFTAYGEIQSVRI-----PKKPNGG-HRGFGFVEFLTEEEAKNAM 852
Query: 645 KVLQNS 650
+ L NS
Sbjct: 853 EALGNS 858
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +I ++NL + T ++ KLF YG + V +P K +GF V FL E A A
Sbjct: 794 SSKIIIKNLPFESTIKEIRKLFTAYGEIQSVRIP-KKPNGGHRGFGFVEFLTEEEAKNAM 852
Query: 396 QHLDGTVFLGRMLHL 410
+ L + F GR L L
Sbjct: 853 EALGNSHFYGRHLVL 867
>gi|242802831|ref|XP_002484053.1| pre-rRNA processing protein Mrd1, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717398|gb|EED16819.1| pre-rRNA processing protein Mrd1, putative [Talaromyces stipitatus
ATCC 10500]
Length = 812
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 196/346 (56%), Gaps = 30/346 (8%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
+D+F Q R ILVKN Y DL+ LFEPFG L R+L+PP G +VEF + +
Sbjct: 458 IDSFKQ--RERGTTTILVKNFSYGVKVADLRKLFEPFGQLTRLLMPPSGTIAIVEFAKPD 515
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A AF LAY K + L+LE AP+ +F S G EG + K
Sbjct: 516 EASKAFKGLAYRKLGDSILFLERAPKDLFESPPTGSALIS-------GVEGPQAK----- 563
Query: 555 EEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
QG + ED E P+ P +TL+++NLNF++T + F + V
Sbjct: 564 ----DQGFSAADTFAAEDNE--PQLPTSTLFVRNLNFSTTSARLTEVFSSLDGFLTAKVK 617
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
K DPK PG+ LSMG+GFV+F T+E AL V+ +LD+H++ +K S+R +++ T
Sbjct: 618 TKTDPKRPGETLSMGFGFVEFRTKEQAQAALAVMDGYTLDQHKLVVKTSHRGMDAAET-- 675
Query: 674 KRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
+R+ N K +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGF
Sbjct: 676 RRQEDNAKKVAARRTKIIIKNLPFQATKHDVRSLFGAYGQLRSVRVPKKFDRSA--RGFA 733
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEW--AEEADNVEDIRK 775
F +F++ EA+ AM AL ++THL GR+LVLE+ AE D E+IRK
Sbjct: 734 FADFVSSREAENAMDAL-KNTHLLGRKLVLEYASAEAIDAEEEIRK 778
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I SGR+F+RNL+Y TE DL LF +G + E+ + D T +KGFA + ++ P
Sbjct: 280 ELIRISGRLFLRNLAYDATEADLETLFAPFGKIDEIHVAFDTRTTSSKGFAYIQYVDPSS 339
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A AY++LDG F GR+LH++P K++
Sbjct: 340 AIDAYKNLDGKDFQGRLLHILPASAKKS 367
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 149/357 (41%), Gaps = 48/357 (13%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKA----- 274
R TI+VKN GVK DL+ F+P L + G +A + F +KA
Sbjct: 466 RGTTTILVKNFSYGVKVADLRKLFEPFGQLTRLLMPPSGTIAIVEFAKPDEASKAFKGLA 525
Query: 275 ---LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE 331
L + F + ++++ SA SG + A + A + ED+ E
Sbjct: 526 YRKLGDSILFLERAPKDLFESPPTGSALISGV--EGPQAKDQGFSAADTFAAEDN----E 579
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-------GFALVT 384
+ +FVRNL+++ T LT++F + + +TD + GF V
Sbjct: 580 PQLPTSTLFVRNLNFSTTSARLTEVFSSLDGF--LTAKVKTKTDPKRPGETLSMGFGFVE 637
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEA 444
F E A A +DG L + K + +D + R+ D +V
Sbjct: 638 FRTKEQAQAALAVMDGYTLDQHKLVV-----KTSHRGMD----AAETRRQEDNAKKVAAR 688
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKA 498
R+K I++KNLP++ D+++LF +G L V VP G +F+ +A+
Sbjct: 689 RTK--IIIKNLPFQATKHDVRSLFGAYGQLRSVRVPKKFDRSARGF-AFADFVSSREAEN 745
Query: 499 AFNSLAYTKFKEVPLYLEWA-PEGVFAEAK----EKSKGKEKEKNEEEGEEGEEEKK 550
A ++L T L LE+A E + AE + EK G++ ++ + + G KK
Sbjct: 746 AMDALKNTHLLGRKLVLEYASAEAIDAEEEIRKIEKKTGQQLDRQKLQSLTGTGRKK 802
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
++ E L F + VTD + RR F+G+ + A+ A YFN T++ S+I
Sbjct: 15 LSNEDLGKHFSSRFHVTDSHVIPN-----RRIGFVGFKNAEIAKEAAKYFNKTFLRMSKI 69
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
VE G++ K+ + DS++ N+ K+D + SK+DP
Sbjct: 70 SVEIARPAGESKPTKNRTHSDHDSTS--NASNLKRKRD------------ETSKDDPKLQ 115
Query: 149 DFLQL 153
+FL +
Sbjct: 116 EFLNV 120
>gi|358391000|gb|EHK40405.1| hypothetical protein TRIATDRAFT_153359 [Trichoderma atroviride IMI
206040]
Length = 839
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 238/850 (28%), Positives = 367/850 (43%), Gaps = 190/850 (22%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT+ ++ F K +TDV+L RR ++GY + AQ A+ YFN +Y+ S+
Sbjct: 15 ITEADVRKHFSAKNREITDVKLIPQ-----RRIGYVGYKTPEDAQGAVKYFNKSYIRMSK 69
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSK----- 142
I VE + D KS D+ +L+P H K+ KK K
Sbjct: 70 ISVEPAKPISDPALGKSQRSVHSDAHV---------ATNLRP-HLKEEGDSKKRKREDLD 119
Query: 143 -NDPTFSDFLQL--HGK------------DVSKLLPLSNKDGEEKEEENEDES------- 180
+DP +FL++ GK D++ L EE E +NE E
Sbjct: 120 ESDPKLREFLRVMKQGKGGVLADETNPDADMTGLATGGGALVEEGESDNEYEQIPKRQEK 179
Query: 181 --NNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKK 238
Q + A+ + L + + A SD SV PV++A K Q
Sbjct: 180 PHKTQSSEAN----QNLVMNQRVPREATSDQSVQPVAEADSVKPQEA------------- 222
Query: 239 KDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLN--IYKYSKDN 296
+ P SV T D+ N+ L + + D+
Sbjct: 223 -------EEAPQTSVDAT----------DDDWLRSRTNRLLDLVDPDDLPQPAEQRAVDS 265
Query: 297 SAKYSGAADDNNNAS----MENIKAKHWKSQEDSVQFAEDIAESGR---IFVRNLSYTVT 349
+ + G +D ++S ME+ + +S + IA R +FVRNL YT T
Sbjct: 266 AVRDDGENNDTTHSSHEVVMEDAPDQANDQGANSTAADDAIATISRTSRLFVRNLPYTAT 325
Query: 350 EDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLH 409
E+DL + F ++G L EV LP + + KGFALV + A +A+Q LDG F GR+LH
Sbjct: 326 EEDLHQKFGEFGTLQEVHLPTNASGVR-KGFALVLYDDSSDAVKAFQALDGVTFQGRILH 384
Query: 410 LIPGK-------------PKENEGNVDGKVHCCISE-------RKLDAFNQVVEAR---S 446
+IP + P + + + K S DA N V AR S
Sbjct: 385 IIPAEAKKLQDEFGMSKLPLKKQNLIRKKAEASTSVFNWNSLYMSQDAVNASVAARLGVS 444
Query: 447 KRIIL--------VKN-LPYRTLPTDLKALFEPFG-DLG----------RVLVP--PYGI 484
K +L VK + T+ + KA F G DL +LV PYG
Sbjct: 445 KSEVLDPTSADAGVKQAIAETTIIQETKAFFASNGVDLDAFKSHKRGGTSILVKNFPYGT 504
Query: 485 T-------------------------GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAP 519
+ +++F Q N AKAAF +AY + K+ L+LE AP
Sbjct: 505 SMEELRKMFEECGPVLRVLMPPTGTIAIIQFAQLNHAKAAFGKMAYRRVKDSVLFLEKAP 564
Query: 520 EGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN---VEEDEERE 576
+F K+ ++++ GE+ + GV ++ + D+ E
Sbjct: 565 IDLF-----KNGSTQQDQASPLGEQ--------------RTGVQKLSVDDLLSSGDKIEE 605
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
P +L+++NLNF +T + + F+ S V K D K PGQ LSMG+GFV+F +
Sbjct: 606 PAETASLFVRNLNFATTTNKLAEAFEPLDGFVSARVKTKIDAKKPGQTLSMGFGFVEFRS 665
Query: 637 RESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTG---SKILVRNI 693
+ ALK + LD H + +K S+R ++ +R+ +VAK+ +KI+++N+
Sbjct: 666 KSQAQAALKTMDGYVLDGHTLGVKASHRGHDAAE---ERRREDVAKKAAAQRTKIVIKNL 722
Query: 694 PFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTH 753
PFQA + ++ LF +G+L+ VR+PKK + RGF F +F+T EA+ A+ AL + TH
Sbjct: 723 PFQATKKDIRTLFGTYGQLRSVRVPKKADYTA--RGFAFADFVTPREAENALNAL-KDTH 779
Query: 754 LYGRRLVLEW 763
L GRRLVL++
Sbjct: 780 LLGRRLVLDF 789
>gi|240279857|gb|EER43362.1| multiple RNA-binding domain-containing protein [Ajellomyces
capsulatus H143]
gi|325092985|gb|EGC46295.1| multiple RNA-binding domain-containing protein [Ajellomyces
capsulatus H88]
Length = 801
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 229/443 (51%), Gaps = 36/443 (8%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ E+GR+FVRNL Y +E D+ LF +G + E+ + D K+KGFA V + PE A
Sbjct: 334 LRETGRLFVRNLLYNASESDMEPLFSPFGKIDEIHVAFDTRHSKSKGFAYVQYANPE-AD 392
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERK---------LDAFNQVVE 443
+ + + + + P + H I E K LD+F Q
Sbjct: 393 AVMSSVSERLGVSKSELIDPTSSDAAIRQAHAETHV-IQETKAYFSSNGVNLDSFKQ--R 449
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
R ILVKN + D++ LFEPFG + R+L+PP G +VEF+ ++ + AF L
Sbjct: 450 ERGNTAILVKNFSFGVKADDIRKLFEPFGQIKRLLMPPSGTIAIVEFVMADECQKAFKGL 509
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
AY K + L+LE AP+ +F EK + + + D +
Sbjct: 510 AYRKLGDSILFLERAPKDLF---------DEKATASRVIAPPPKVVSQTFSTSDTFKATE 560
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E + +TL+++NLNF++T + F+ S V K DPK PG+
Sbjct: 561 TEETETPLET-------STLFVRNLNFSTTNARLTEVFQPLDGFLSARVKTKADPKRPGE 613
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK- 682
LSMG+GFV+F T + AL +Q LD+H++ +K S++ ++ A +R+ N K
Sbjct: 614 TLSMGFGFVEFRTAAQAHAALATMQGYKLDQHELVVKTSHKAMD--AAEERRREDNAKKL 671
Query: 683 -QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K + RGF F +FI+ EA
Sbjct: 672 AMRGTKILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDRTA--RGFAFADFISAREA 729
Query: 742 KRAMKALCQSTHLYGRRLVLEWA 764
+ AM AL ++THL GRRLVLE+A
Sbjct: 730 ENAMDAL-KNTHLLGRRLVLEFA 751
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ ++L+ F + VTD + RR F+G+ +AQ A++YFN TY+ S+I
Sbjct: 16 FSNDELRKHFSTRYQVTDAHVIPK-----RRIGFVGFKTPTEAQDAVNYFNKTYIRMSKI 70
Query: 89 KVE 91
VE
Sbjct: 71 AVE 73
>gi|356551226|ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Glycine max]
Length = 847
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 200/342 (58%), Gaps = 32/342 (9%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS ++LVKNLPY + +L +F FG L ++++PP LV FL+ +A+AAF LA
Sbjct: 498 RSNHVLLVKNLPYGSTENELAKMFGKFGSLDKIILPPTKTLALVVFLEPVEARAAFRGLA 557
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y +FK+ PLYLEWAP + S+ + NE G GE E K E+ +
Sbjct: 558 YKRFKDAPLYLEWAPSNIL------SQSSTSKNNEINGAIGENEAKRQILEQ-------Q 604
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKKDPKSP 621
VE + D + + +L++KNLNF + ++S+R+H K G I SV V +
Sbjct: 605 VERITDVDIDSDRVQARSLFVKNLNFKTIDESLRKHLTEHMKEGSILSVKVLKH---LKN 661
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN--RNLESEATTVKRKSSN 679
G+ +SMG+GFV+F + E+ K LQ + LD H + L+ N + + + T K +SS
Sbjct: 662 GKNVSMGFGFVEFDSPETATNVCKDLQGTVLDSHALILQPCNVKNDGQKQKTLEKDRSS- 720
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
+K+L++N+ F+A + ++ LF FG++K +RLP K G HRGF FVE++T+
Sbjct: 721 ------TKLLIKNVAFEATEKDLRRLFSPFGQIKSLRLPMKF---GNHRGFAFVEYVTQQ 771
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
EA+ A+KAL STHLYGR LV+E A+EA+++E++R RT F
Sbjct: 772 EAQNALKALS-STHLYGRHLVIERAKEAESLEELRARTAAQF 812
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 14/133 (10%)
Query: 29 ITQEQLKAKFEEKG-TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
+ +++L+ F KG +TD +L T +GK R+FAFIGY ED+AQ A+ YFN ++ +SR
Sbjct: 13 VAEDELREFFSGKGGIITDAKLMRTKDGKSRQFAFIGYRTEDEAQEAIRYFNKNFLRTSR 72
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSK----- 142
I E GD P+ WS+++ +K + D++ + G+ SK
Sbjct: 73 IICEVARKHGDENLPRPWSRHS------KKKDDKVTAPDVEKPARANKGQGENSKGSVGD 126
Query: 143 --NDPTFSDFLQL 153
+DP DFLQ+
Sbjct: 127 DVDDPQLQDFLQV 139
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 133/337 (39%), Gaps = 71/337 (21%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYF--------------KPLPLA------SVRTTFLGM 260
KR H ++VKNLP G + +L F K L L R F G+
Sbjct: 497 KRSNHVLLVKNLPYGSTENELAKMFGKFGSLDKIILPPTKTLALVVFLEPVEARAAFRGL 556
Query: 261 AYIGFKDEKNCNKALNKNKSFWKGKQLNIY-KYSKDNSAKYSGAADDN--NNASMENIKA 317
AY FKD +Y +++ N S + +N N A EN
Sbjct: 557 AYKRFKDAP-------------------LYLEWAPSNILSQSSTSKNNEINGAIGENEAK 597
Query: 318 KHWKSQE----DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY---GPL--AEVIL 368
+ Q+ V D ++ +FV+NL++ ++ L K ++ G + +V+
Sbjct: 598 RQILEQQVERITDVDIDSDRVQARSLFVKNLNFKTIDESLRKHLTEHMKEGSILSVKVLK 657
Query: 369 PIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHC 428
+ + + GF V F PE AT + L GTV L L P K DG+
Sbjct: 658 HLKNGKNVSMGFGFVEFDSPETATNVCKDLQGTVLDSHALILQPCNVKN-----DGQKQK 712
Query: 429 CISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT-- 485
+ + RS +L+KN+ + DL+ LF PFG + + +P +G
Sbjct: 713 TLE-----------KDRSSTKLLIKNVAFEATEKDLRRLFSPFGQIKSLRLPMKFGNHRG 761
Query: 486 -GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEG 521
VE++ + +A+ A +L+ T L +E A E
Sbjct: 762 FAFVEYVTQQEAQNALKALSSTHLYGRHLVIERAKEA 798
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 57/81 (70%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ +S R+FVRNL YT TE++L + F ++G +++V L ++K+T ++KG A + + P A
Sbjct: 306 VFDSCRLFVRNLPYTTTEEELEEHFSRFGSVSQVHLVVNKDTKRSKGIAYILYTAPNIAA 365
Query: 393 QAYQHLDGTVFLGRMLHLIPG 413
+A + LD ++F GR+LH++P
Sbjct: 366 RAQEELDNSIFQGRLLHVMPA 386
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 164/412 (39%), Gaps = 102/412 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V+NL Y TE++L K+F K+G L ++ILP TK ALV FL P A A++ L
Sbjct: 503 LLVKNLPYGSTENELAKMFGKFGSLDKIILP------PTKTLALVVFLEPVEARAAFRGL 556
Query: 399 ------DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI--- 449
D ++L I + ++ N +++ I E +A Q++E + +RI
Sbjct: 557 AYKRFKDAPLYLEWAPSNILSQSSTSKNN---EINGAIGEN--EAKRQILEQQVERITDV 611
Query: 450 -----------ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------------PYGITG 486
+ VKNL ++T+ L+ G +L G G
Sbjct: 612 DIDSDRVQARSLFVKNLNFKTIDESLRKHLTEHMKEGSILSVKVLKHLKNGKNVSMGF-G 670
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGE 546
VEF A L T L L+ P V K+ G+
Sbjct: 671 FVEFDSPETATNVCKDLQGTVLDSHALILQ--PCNV------KNDGQ------------- 709
Query: 547 EEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGP 606
K+ T E+D T L IKN+ F +TE +RR F G
Sbjct: 710 ---KQKTLEKD--------------------RSSTKLLIKNVAFEATEKDLRRLFSPFGQ 746
Query: 607 IASVTVARKKDPKSPGQFLS-MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRN 665
I S+ + P +F + G+ FV++ T++ ALK L ++ L + ++R+
Sbjct: 747 IKSLRL--------PMKFGNHRGFAFVEYVTQQEAQNALKALSSTHLYGRHLVIERAKEA 798
Query: 666 LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
E + + +Q G + ++ F K+ +V+ F G++KF R+
Sbjct: 799 ESLEELRARTAAQFSDEQNGFQSAMK---FSKKRKQVD--FLDEGKMKFGRM 845
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ ++N+++ TE DL +LF +G + + LP+ + +GFA V ++ + A A
Sbjct: 720 STKLLIKNVAFEATEKDLRRLFSPFGQIKSLRLPM--KFGNHRGFAFVEYVTQQEAQNAL 777
Query: 396 QHLDGTVFLGRMLHLIPGKPKENE 419
+ L T GR HL+ + KE E
Sbjct: 778 KALSSTHLYGR--HLVIERAKEAE 799
>gi|449505035|ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Cucumis sativus]
Length = 826
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 202/337 (59%), Gaps = 23/337 (6%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS I+LVKNLPY + +L +F FG + ++++P I LV FL+ + A+AAF LA
Sbjct: 484 RSNHILLVKNLPYGSSQGELANMFGKFGSVDKIILPSTKILALVIFLEPSVARAAFKGLA 543
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y ++K+ PLYLEWAP+ + ++ K N E+ + GE + + E+ +G+P+
Sbjct: 544 YKRYKDAPLYLEWAPDNILSQ-------KPMAGNVEDEKVGEGDTRRVMLEQ-AVEGIPD 595
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
V+ + + E R +L++KNLNF +T++S+R HF + + A+ K GQ
Sbjct: 596 VDLDPDRVESR------SLFVKNLNFKTTDESLRNHFSEHMKEGKILSAKVKKHVKKGQH 649
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
+SMG+GF++F + E+ LQ + LD H + L+ N + + KRK +Q+
Sbjct: 650 VSMGFGFLEFDSVETSTSVCSNLQGTVLDGHALILQMCNVKKDDQG---KRKVDK--EQS 704
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+K+LVRN+ F+A ++ +LF +G++K +RLP K G HRGF FVEF+TK EA+ A
Sbjct: 705 STKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKF---GKHRGFAFVEFVTKQEAQNA 761
Query: 745 MKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+AL +THLYGR LVLE A+E +++E++R RT F
Sbjct: 762 FQALS-NTHLYGRHLVLERAKEGESLEELRARTAAQF 797
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
+++ ESGR+FVRNL Y TE++L + F+KYG ++EV L +DK+T ++KG A + + +PE
Sbjct: 285 DEMLESGRLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPES 344
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN-EGNVDGKVHCCIS 431
A +A + LD ++F GR+LH++P + K E V C +S
Sbjct: 345 AKRALEELDNSIFQGRLLHVMPAELKNTRETGVSSIAVCSLS 386
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
I +L+ F EKG +TDV+L T +GK R+FAFIG+ E +AQ A+ YFN +++ + RI
Sbjct: 17 IDDNRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRYFNKSFINTHRI 76
Query: 89 KVEKCSNLGDTTKPKSWSKYA 109
E +GD P+ WSK++
Sbjct: 77 ACESAWKVGDPKIPRPWSKHS 97
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 40/326 (12%)
Query: 216 KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLG----MAYIGFKDEKNC 271
KA HKR H ++VKNLP G + +L F SV L +A + F E +
Sbjct: 478 KADGHKRSNHILLVKNLPYGSSQGELANMFG--KFGSVDKIILPSTKILALVIFL-EPSV 534
Query: 272 NKALNKNKSFWKGKQLNIY-KYSKDN--SAK-YSGAADDNNNASMENIKAKHWKSQED-- 325
+A K ++ + K +Y +++ DN S K +G +D + + ++ E
Sbjct: 535 ARAAFKGLAYKRYKDAPLYLEWAPDNILSQKPMAGNVEDEKVGEGDTRRVMLEQAVEGIP 594
Query: 326 SVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY---GPL--AEVILPIDKETDKTKGF 380
V D ES +FV+NL++ T++ L F ++ G + A+V + K + GF
Sbjct: 595 DVDLDPDRVESRSLFVKNLNFKTTDESLRNHFSEHMKEGKILSAKVKKHVKKGQHVSMGF 654
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLDAFN 439
+ F E +T +L GTV G L L + K+++G +RK+D
Sbjct: 655 GFLEFDSVETSTSVCSNLQGTVLDGHALILQMCNVKKDDQG-----------KRKVD--- 700
Query: 440 QVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT---GLVEFLQKNQ 495
+ +S +LV+N+ + DL+ LF P+G + + +P +G VEF+ K +
Sbjct: 701 ---KEQSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQE 757
Query: 496 AKAAFNSLAYTKFKEVPLYLEWAPEG 521
A+ AF +L+ T L LE A EG
Sbjct: 758 AQNAFQALSNTHLYGRHLVLERAKEG 783
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ VRN+++ T DL +LF YG + + LP+ + K +GFA V F+ + A A+
Sbjct: 705 STKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPM--KFGKHRGFAFVEFVTKQEAQNAF 762
Query: 396 QHLDGTVFLGRMLHLIPGKPKENE 419
Q L T GR HL+ + KE E
Sbjct: 763 QALSNTHLYGR--HLVLERAKEGE 784
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
ED++ E L+++NL + +TE+ + HF+K G ++ V + KD + S G
Sbjct: 281 EDKKDEMLESGRLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRR-----SKGLA 335
Query: 631 FVQFYTRESLNQALKVLQNS 650
++ + ES +AL+ L NS
Sbjct: 336 YIHYTLPESAKRALEELDNS 355
>gi|449464088|ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 202/337 (59%), Gaps = 23/337 (6%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS I+LVKNLPY + +L +F FG + ++++P I LV FL+ + A+AAF LA
Sbjct: 481 RSNHILLVKNLPYGSSQGELANMFGKFGSVDKIILPSTKILALVIFLEPSVARAAFKGLA 540
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y ++K+ PLYLEWAP+ + ++ K N E+ + GE + + E+ +G+P+
Sbjct: 541 YKRYKDAPLYLEWAPDNILSQ-------KPMAGNVEDEKVGEGDTRRVMLEQ-AVEGIPD 592
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
V+ + + E R +L++KNLNF +T++S+R HF + + A+ K GQ
Sbjct: 593 VDLDPDRVESR------SLFVKNLNFKTTDESLRNHFSEHMKEGKILSAKVKKHVKKGQH 646
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
+SMG+GF++F + E+ LQ + LD H + L+ N + + KRK +Q+
Sbjct: 647 VSMGFGFLEFDSVETSTSVCSNLQGTVLDGHALILQMCNVKKDDQG---KRKVDK--EQS 701
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+K+LVRN+ F+A ++ +LF +G++K +RLP K G HRGF FVEF+TK EA+ A
Sbjct: 702 STKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKF---GKHRGFAFVEFVTKQEAQNA 758
Query: 745 MKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+AL +THLYGR LVLE A+E +++E++R RT F
Sbjct: 759 FQALS-NTHLYGRHLVLERAKEGESLEELRARTAAQF 794
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 64/86 (74%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
+++ ESGR+FVRNL Y TE++L + F+KYG ++EV L +DK+T ++KG A + + +PE
Sbjct: 285 DEMLESGRLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPES 344
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A +A + LD ++F GR+LH++P + K
Sbjct: 345 AKRALEELDNSIFQGRLLHVMPAELK 370
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
I +L+ F EKG +TDV+L T +GK R+FAFIG+ E +AQ A+ YFN +++ + RI
Sbjct: 17 IDDNRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRYFNKSFINTHRI 76
Query: 89 KVEKCSNLGDTTKPKSWSKYA 109
E +GD P+ WSK++
Sbjct: 77 ACESAWKVGDPKIPRPWSKHS 97
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 147/326 (45%), Gaps = 40/326 (12%)
Query: 216 KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLG----MAYIGFKDEKNC 271
KA HKR H ++VKNLP G + +L F SV L +A + F E +
Sbjct: 475 KADGHKRSNHILLVKNLPYGSSQGELANMFG--KFGSVDKIILPSTKILALVIFL-EPSV 531
Query: 272 NKALNKNKSFWKGKQLNIY-KYSKDN---SAKYSGAADDNNNASMENIKAKHWKSQED-- 325
+A K ++ + K +Y +++ DN +G +D + + ++ E
Sbjct: 532 ARAAFKGLAYKRYKDAPLYLEWAPDNILSQKPMAGNVEDEKVGEGDTRRVMLEQAVEGIP 591
Query: 326 SVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY---GPL--AEVILPIDKETDKTKGF 380
V D ES +FV+NL++ T++ L F ++ G + A+V + K + GF
Sbjct: 592 DVDLDPDRVESRSLFVKNLNFKTTDESLRNHFSEHMKEGKILSAKVKKHVKKGQHVSMGF 651
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLDAFN 439
+ F E +T +L GTV G L L + K+++G +RK+D
Sbjct: 652 GFLEFDSVETSTSVCSNLQGTVLDGHALILQMCNVKKDDQG-----------KRKVD--- 697
Query: 440 QVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT---GLVEFLQKNQ 495
+ +S +LV+N+ + DL+ LF P+G + + +P +G VEF+ K +
Sbjct: 698 ---KEQSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQE 754
Query: 496 AKAAFNSLAYTKFKEVPLYLEWAPEG 521
A+ AF +L+ T L LE A EG
Sbjct: 755 AQNAFQALSNTHLYGRHLVLERAKEG 780
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ VRN+++ T DL +LF YG + + LP+ + K +GFA V F+ + A A+
Sbjct: 702 STKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPM--KFGKHRGFAFVEFVTKQEAQNAF 759
Query: 396 QHLDGTVFLGRMLHLIPGKPKENE 419
Q L T GR HL+ + KE E
Sbjct: 760 QALSNTHLYGR--HLVLERAKEGE 781
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
ED++ E L+++NL + +TE+ + HF+K G ++ V + KD + S G
Sbjct: 281 EDKKDEMLESGRLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRR-----SKGLA 335
Query: 631 FVQFYTRESLNQALKVLQNS 650
++ + ES +AL+ L NS
Sbjct: 336 YIHYTLPESAKRALEELDNS 355
>gi|357168436|ref|XP_003581646.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 894
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/341 (37%), Positives = 200/341 (58%), Gaps = 30/341 (8%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS +ILVKNLP+ + DL A+F+ G L ++++PP + LV F++ +A+ AF L
Sbjct: 548 RSNHVILVKNLPFNSSEEDLAAMFQKHGSLDKIILPPTRVFALVVFVEATEARHAFKKLL 607
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
YT++K+ PLYLEWAP+ + + EEE+ E + +
Sbjct: 608 YTRYKDTPLYLEWAPDNILSPT---------------SIHVEEEETNVIGERIVAKAI-- 650
Query: 565 VEENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
V++ VE E +PD +L++KNLNF +T++S+++HF I S+ A K
Sbjct: 651 VDQTVEGVGAEEIDPDRVESRSLFVKNLNFKTTDESLKQHFSTKLKIGSLKSATVKKHIK 710
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNV 680
G+ +SMG+GFV+F + E+ K LQ + LD H + L+ + +S+ T K+ N
Sbjct: 711 KGKNVSMGFGFVEFDSIETATSVCKDLQGTLLDGHALILQLCHGKKDSK--TAKK---NE 765
Query: 681 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 740
++ +K+LVRN+ F+A + ++ +LF FG+LK +RLP K G HRGF FVEF+TK E
Sbjct: 766 KDKSSTKLLVRNVAFEATEKDLRQLFSPFGQLKSLRLPMKF---GSHRGFAFVEFVTKQE 822
Query: 741 AKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
A+ A++AL STHLYGR LV+E A+E + +E++R RT F
Sbjct: 823 AQNALQALA-STHLYGRHLVIERAKEGETLEELRARTAAQF 862
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 139/325 (42%), Gaps = 47/325 (14%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCN 272
KR H I+VKNLP ++DL A F+ LP V F + ++ + ++
Sbjct: 547 KRSNHVILVKNLPFNSSEEDLAAMFQKHGSLDKIILPPTRV---FALVVFVEATEARHAF 603
Query: 273 KALNKNKSFWKGKQLNIY-KYSKDN--SAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
K L + + K +Y +++ DN S ++ N E I AK Q
Sbjct: 604 KKL----LYTRYKDTPLYLEWAPDNILSPTSIHVEEEETNVIGERIVAKAIVDQTVEGVG 659
Query: 330 AEDI----AESGRIFVRNLSYTVTEDDLTKLFE---KYGPL--AEVILPIDKETDKTKGF 380
AE+I ES +FV+NL++ T++ L + F K G L A V I K + + GF
Sbjct: 660 AEEIDPDRVESRSLFVKNLNFKTTDESLKQHFSTKLKIGSLKSATVKKHIKKGKNVSMGF 719
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQ 440
V F E AT + L GT+ G L L C ++ +
Sbjct: 720 GFVEFDSIETATSVCKDLQGTLLDGHALIL----------------QLCHGKKDSKTAKK 763
Query: 441 VVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT---GLVEFLQKNQA 496
+ +S +LV+N+ + DL+ LF PFG L + +P +G VEF+ K +A
Sbjct: 764 NEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQLKSLRLPMKFGSHRGFAFVEFVTKQEA 823
Query: 497 KAAFNSLAYTKFKEVPLYLEWAPEG 521
+ A +LA T L +E A EG
Sbjct: 824 QNALQALASTHLYGRHLVIERAKEG 848
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 31 QEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKV 90
+++L+ F KG VTD ++ T +GK R FAFIG+ + A AL YFNNTY+ +S+I
Sbjct: 37 EKRLREVFSRKGEVTDAKVIRTKDGKSRHFAFIGFRTNEDAVEALKYFNNTYIDTSKITC 96
Query: 91 EKCSNLGDTTKPKSWSKYA 109
E +GD P+ WS+++
Sbjct: 97 EVARKIGDPDAPRPWSRHS 115
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E+GR+++ NL Y TEDDL +L +YG + + + +DK T + G V F +P+ A +A
Sbjct: 355 ETGRLYICNLPYATTEDDLVELCSQYGDVDQAHIVVDKTTKLSTGRGYVLFSLPDSAVRA 414
Query: 395 YQHLDGTVFLGRMLHLIPGKPKEN 418
LD F GR+L + KP N
Sbjct: 415 LDELDNLSFQGRLLRVKAAKPLNN 438
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK 378
H K + + E S ++ VRN+++ TE DL +LF +G L + LP+ + +
Sbjct: 753 HGKKDSKTAKKNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQLKSLRLPM--KFGSHR 810
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
GFA V F+ + A A Q L T GR HL+ + KE E
Sbjct: 811 GFAFVEFVTKQEAQNALQALASTHLYGR--HLVIERAKEGE 849
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 659 LKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP 718
L RS N+ + +K+ + K++ ILV+N+PF + + ++ +F+ G L + LP
Sbjct: 525 LSRSGVNVAALEENTSKKNEKL-KRSNHVILVKNLPFNSSEEDLAAMFQKHGSLDKIILP 583
Query: 719 KKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR----LVLEWAEEADNV 770
V F V F+ EA+ A K L LY R L LEWA DN+
Sbjct: 584 PTRV-------FALVVFVEATEARHAFKKL-----LYTRYKDTPLYLEWA--PDNI 625
>gi|405118918|gb|AFR93691.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 752
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 191/347 (55%), Gaps = 21/347 (6%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS+ ILVKN+PY T L LF P G L RVL+PP G G+VEF A AF +LA
Sbjct: 397 RSQTTILVKNIPYGTSIQSLTDLFAPHGKLTRVLLPPAGTLGVVEFENHMDAGRAFKALA 456
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + LYLE P G+F + E G E+K+E A + + E
Sbjct: 457 YRRLGNAVLYLEKGPVGMF----------KSETTPGAGPISTEQKREEEA-----KALAE 501
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
E++ E + E +TL++K LNF +T ++ + V K DPK PG+
Sbjct: 502 KVESLPEQPDPTDEAGSTLFLKGLNFATTTPHLQTVLSHIPGFSFARVQMKPDPKRPGEK 561
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
LSMGYGFV F T+E+ +ALK L+ +D +E+K + R LE + T K + K
Sbjct: 562 LSMGYGFVGFKTKEAATKALKALEGFEIDGKSLEVKFAQRGLEDDRETKKSGDAEGDKTK 621
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFITKNE 740
+K+LV+N+PF+A + +V ELF A+G+LK +RLP+K V G+ RGF F+EF T E
Sbjct: 622 STKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTE 681
Query: 741 AKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTAVGL 787
A RAM+AL + THL GR LVL+WA E + V D++ + G G+
Sbjct: 682 AARAMEAL-KHTHLLGRHLVLQWANEGEEV-DVKGLREKVKGEVRGM 726
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I + R+FVRNL++ + L+ F YG + E LP+ + T + G A + F PE A
Sbjct: 200 ILSTSRLFVRNLAFITNSESLSSHFSTYGRIDECHLPVSQTTGEPLGTAFLQFHNPEDAL 259
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENE-------GNVDGKV 426
AY+ LD T F GR+LH++PG+ K + G VDGKV
Sbjct: 260 AAYRALDKTTFQGRLLHVLPGRAKPGQEGAVAGSGVVDGKV 300
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 73/180 (40%), Gaps = 37/180 (20%)
Query: 242 KAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSF-WKGKQLNIYKYSK-----D 295
+ KP P +G ++GFK ++ KAL + F GK L + K+++ D
Sbjct: 548 RVQMKPDPKRPGEKLSMGYGFVGFKTKEAATKALKALEGFEIDGKSLEV-KFAQRGLEDD 606
Query: 296 NSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTK 355
K SG A+ D +S ++ V+NL + T+ D+ +
Sbjct: 607 RETKKSGDAEG-------------------------DKTKSTKVLVKNLPFEATKKDVRE 641
Query: 356 LFEKYGPLAEVIL-----PIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
LF YG L + L P T+GFA + F A +A + L T LGR L L
Sbjct: 642 LFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTEAARAMEALKHTHLLGRHLVL 701
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 142/376 (37%), Gaps = 78/376 (20%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEK 269
P R TI+VKN+P G + L F P LP A + + F++
Sbjct: 393 PRVPRSQTTILVKNIPYGTSIQSLTDLFAPHGKLTRVLLPPAGT------LGVVEFENHM 446
Query: 270 NCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
+ +A K+ + N Y + G I + K +E++
Sbjct: 447 DAGRAF---KALAYRRLGNAVLYLEKGPV---GMFKSETTPGAGPISTEQ-KREEEAKAL 499
Query: 330 AEDIA----------ESGR-IFVRNLSYTVTEDDLTKLFEKYG--PLAEVILPIDKETDK 376
AE + E+G +F++ L++ T L + A V + D +
Sbjct: 500 AEKVESLPEQPDPTDEAGSTLFLKGLNFATTTPHLQTVLSHIPGFSFARVQMKPDPKRPG 559
Query: 377 TK---GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGK-VHCCISE 432
K G+ V F E AT+A + L+G +DGK + ++
Sbjct: 560 EKLSMGYGFVGFKTKEAATKALKALEGF-------------------EIDGKSLEVKFAQ 600
Query: 433 RKLDAFNQVVEA------RSKRI-ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGI- 484
R L+ + ++ ++K +LVKNLP+ D++ LF +G L + +P +
Sbjct: 601 RGLEDDRETKKSGDAEGDKTKSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVP 660
Query: 485 --TG--------LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE 534
TG +EF +A A +L +T L L+WA EG + K +E
Sbjct: 661 TSTGAQSTRGFAFLEFTTHTEAARAMEALKHTHLLGRHLVLQWANEGEEVDVKGL---RE 717
Query: 535 KEKNEEEGEEGEEEKK 550
K K E G E ++K
Sbjct: 718 KVKGEVRGMESGGDRK 733
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 44/235 (18%)
Query: 569 VEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
+E + R P TT+ +KN+ + ++ S+ F G + V + P L
Sbjct: 388 LETLQPRVPRSQTTILVKNIPYGTSIQSLTDLFAPHGKLTRVLL-------PPAGTL--- 437
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQIELKR------------------SNRNLESEA 670
G V+F +A K L L + L++ + + E EA
Sbjct: 438 -GVVEFENHMDAGRAFKALAYRRLGNAVLYLEKGPVGMFKSETTPGAGPISTEQKREEEA 496
Query: 671 TTVKRKSSNVAKQ------TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL-----PK 719
+ K ++ +Q GS + ++ + F ++ + F R+ PK
Sbjct: 497 KALAEKVESLPEQPDPTDEAGSTLFLKGLNFATTTPHLQTVLSHIPGFSFARVQMKPDPK 556
Query: 720 KMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIR 774
+ G L G+GFV F TK A +A+KAL + + G+ L +++A+ +ED R
Sbjct: 557 R-PGEKLSMGYGFVGFKTKEAATKALKAL-EGFEIDGKSLEVKFAQRG--LEDDR 607
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 120/281 (42%), Gaps = 38/281 (13%)
Query: 43 TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF-SSRIKVEKCSNLGDTTK 101
T+TD +L RRFAF+GY ++AQ ++F+ TY F + +IKV+
Sbjct: 37 TITDTKLVPK-----RRFAFVGYKDAEEAQRVKEWFDGTYAFGAGKIKVD---------- 81
Query: 102 PKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQ-LHGKDVSK 160
+ K P + KL+ Q+ +P+ +D+ K+ N +F+ + G D +
Sbjct: 82 ---FVKDEPLKTG-DKLNRGEKSQEKRPKEGRDNIQEKQEPNK-RLQEFMSVMKGVDPAM 136
Query: 161 LLP---LSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKA 217
P S +G +KE+ + + ++ +D + + + +PS P +S
Sbjct: 137 APPEASTSTAEGTKKEKSVKGKEKSEEPEEAEADDDDAAWLRRRQAALEGEPSTPQLSAD 196
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEK 269
+ V+NL + L ++F LP++ LG A++ F + +
Sbjct: 197 EQLILSTSRLFVRNLAFITNSESLSSHFSTYGRIDECHLPVSQTTGEPLGTAFLQFHNPE 256
Query: 270 NCNKALNK-NKSFWKGKQLNIY----KYSKDNSAKYSGAAD 305
+ A +K+ ++G+ L++ K ++ + SG D
Sbjct: 257 DALAAYRALDKTTFQGRLLHVLPGRAKPGQEGAVAGSGVVD 297
>gi|294656916|ref|XP_002770331.1| DEHA2D17358p [Debaryomyces hansenii CBS767]
gi|199431836|emb|CAR65685.1| DEHA2D17358p [Debaryomyces hansenii CBS767]
Length = 842
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 251/506 (49%), Gaps = 89/506 (17%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I+E+GR+FVRN+ YT TE + +LFE YGPL EV + ID T K+KGF + F E+A
Sbjct: 303 ISETGRLFVRNILYTSTEQEFRELFETYGPLEEVHVAIDTRTGKSKGFVYIQFFKSENAV 362
Query: 393 QAYQHLDGTVFLGRMLHLIPGK---------------PKENEGNVDGKVHCCI------- 430
AY LD +F GR+LH++P + P + + + K H
Sbjct: 363 SAYHALDKQIFQGRLLHILPAEKKKDHRLDEFDLKNLPLKKQRELKRKDHASKTQFSWNS 422
Query: 431 ----SERKLDAF--------NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG------ 472
S+ LD+ +Q+++A+S + + L + D++ FE G
Sbjct: 423 LYMNSDAVLDSVAAKMGVSKSQLIDAQSSNSAVKQALAEAHVIGDVRKYFENKGVDLTTF 482
Query: 473 -----DLGRVLVP--PYGIT-------------------------GLVEFLQKNQAKAAF 500
D +LV PYG T +VEF A+AAF
Sbjct: 483 DKKERDDKVILVKNFPYGTTIEEIGELFSEYGQLKRMLMPPAGTIAIVEFRDAPSARAAF 542
Query: 501 NSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQ 560
LAY +F + +YLE P+ +F ++ ++N E E+ +E+ E ++
Sbjct: 543 QKLAYRRFGKSIIYLEKGPKDLF------TREPSSDENNEISEKPDEKAVEVKVTANDIM 596
Query: 561 GVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
G E VEEDE+ P ++++KNLNF +T + F+ V K DPK
Sbjct: 597 G----ESKVEEDEDTIDGPTVSIFVKNLNFATTSQRLTEAFQALPGFIVAKVKVKPDPKK 652
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNV 680
G LSMG+GFV+F T+E N A+ + + LD H+++LK S+R ++ + S +
Sbjct: 653 SGSTLSMGFGFVEFRTKEQANVAISTMNDYVLDGHKLQLKLSHR----QSGSTSTSSKSE 708
Query: 681 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 740
+KI+++N+PF+A + +V ELF AFG+LK VR+PKK S RGF FVEF E
Sbjct: 709 KSNKSNKIIIKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSA--RGFAFVEFSLLKE 766
Query: 741 AKRAMKALCQSTHLYGRRLVLEWAEE 766
A+ AM L + HL GRRLV+++AE+
Sbjct: 767 AENAMNQL-EGVHLLGRRLVMQYAEQ 791
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
T+++L+ F +KG VTDV+L G+ RRFAFIGY + A+ + +F+ +++ ++RI
Sbjct: 13 FTEQKLREHFSKKGDVTDVKLMKKRNGESRRFAFIGYKSFEDAEKSARFFDKSFIDTARI 72
Query: 89 KVEKCSNLGDTTKPKSW--SKYAPDSSAYQKLHNIAPKQDL--KPEHTKDSKPGKKSKND 144
VE D + P S+ + D ++ + +Q+ K + T S ++ +N+
Sbjct: 73 DVELAKTFSDPSVPLSFKEKRRLNDEKLREQEARLVEEQERKNKKQRTNKSTIDEEIENN 132
Query: 145 PTFSDFLQL 153
P +F+++
Sbjct: 133 PKLREFMEV 141
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQAYQH 397
I ++NL + T D+ +LF +G L V +P K+ DK+ +GFA V F + + A A
Sbjct: 716 IIIKNLPFEATRKDVLELFGAFGQLKSVRVP--KKFDKSARGFAFVEFSLLKEAENAMNQ 773
Query: 398 LDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISE-RKLDAFNQVVEAR 445
L+G LGR L+ +++ G+ + ++ + +K A Q+ AR
Sbjct: 774 LEGVHLLGR--RLVMQYAEQDAGDAEAEIDRMTKKVKKQVATQQLASAR 820
Score = 39.3 bits (90), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 135/380 (35%), Gaps = 86/380 (22%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCNK 273
R I+VKN P G +++ F +P A +A + F+D +
Sbjct: 487 RDDKVILVKNFPYGTTIEEIGELFSEYGQLKRMLMPPAGT------IAIVEFRDAPSARA 540
Query: 274 ALNKNKSFWKGKQLNIY--KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ------ED 325
A K GK + IY K KD + + ++N + + KA K E
Sbjct: 541 AFQKLAYRRFGKSI-IYLEKGPKDLFTREPSSDENNEISEKPDEKAVEVKVTANDIMGES 599
Query: 326 SVQFAEDIAE--SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK------- 376
V+ ED + + IFV+NL++ T LT+ F+ L I+ K
Sbjct: 600 KVEEDEDTIDGPTVSIFVKNLNFATTSQRLTEAFQ---ALPGFIVAKVKVKPDPKKSGST 656
Query: 377 -TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKL 435
+ GF V F E A A ++ V G L L +S R+
Sbjct: 657 LSMGFGFVEFRTKEQANVAISTMNDYVLDGHKLQL------------------KLSHRQS 698
Query: 436 DAFNQVVEARSKRI---ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITG 486
+ + ++ I++KNLP+ D+ LF FG L V VP G
Sbjct: 699 GSTSTSSKSEKSNKSNKIIIKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSARGF-A 757
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGV----------------------FA 524
VEF +A+ A N L L +++A + A
Sbjct: 758 FVEFSLLKEAENAMNQLEGVHLLGRRLVMQYAEQDAGDAEAEIDRMTKKVKKQVATQQLA 817
Query: 525 EAKEKSKGKEKEKNEEEGEE 544
A+ KGK + EE G+E
Sbjct: 818 SARLAGKGKNIDLEEESGDE 837
>gi|50307487|ref|XP_453723.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690224|sp|Q6CQR6.1|MRD1_KLULA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49642857|emb|CAH00819.1| KLLA0D14949p [Kluyveromyces lactis]
Length = 878
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 166/527 (31%), Positives = 263/527 (49%), Gaps = 90/527 (17%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I E+GR+F+RN+ YT TEDD KLF YG L EV + +D T ++KGFA V F ++A
Sbjct: 326 IRETGRLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAA 385
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENE--GNVDGKVHCCISERKL--------------- 435
A+ LD +F GR+LH++P K++ D K +R+L
Sbjct: 386 TAFVELDKQIFQGRLLHILPADAKKSHKLDEFDLKNLPLKKQRELKRKANSAQQTFSWNS 445
Query: 436 -----DAF------------NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG-DLGR- 476
DA +++++A + + + L ++ D++ FE G DL +
Sbjct: 446 LYMNQDAVLSSVADKLGMKKSELIDAENSSSAVKQALAEASVIGDVRKFFETRGVDLTKF 505
Query: 477 ------------VLVP--PYGIT----------------------GLVEFLQKNQ---AK 497
+LV PYG T G + LQ A+
Sbjct: 506 AQLKNSERDDRVILVKNFPYGTTREEIAELFLPFGKLQRLLLPPSGTIAILQFRDVPAAR 565
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEED 557
AAF+ ++Y +FK+ +YLE P F + + E E + ++ +E K + A+
Sbjct: 566 AAFSKISYKRFKDGIIYLEKGPSDCFTRDAQGDELVESETDIQKAT--AKEAKISGADLL 623
Query: 558 NQQGVPEVEENVEEDEER----EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
Q +P +++ +D++ + P +++IKNLNF++T + FK V
Sbjct: 624 EAQSLPAADKDDHDDDDDDDDVQAGPTVSIFIKNLNFSTTSQQLTEKFKPFNGFVVAQVK 683
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
K DPK PG+ LSMG+GF +F T+E N + ++ + LD H+++LK S+R + T+
Sbjct: 684 TKPDPKQPGKTLSMGFGFAEFKTKEQANAVISAMEGTILDGHKLQLKLSHR----QGTST 739
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
SS K+ KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF FV
Sbjct: 740 TNASSKKKKKNQGKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSA--RGFAFV 797
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRY 780
EF+ EA+ AM L Q HL GRRLV+E+ E+ + ED+ ++ +
Sbjct: 798 EFLLPKEAENAMDQL-QGVHLLGRRLVMEFVEQ--DPEDVEQQIEKM 841
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
++DV+L +G+ RRFAFIG+ E+ A ++YFN T+V +S+I+V + D P+
Sbjct: 39 LSDVKLMKNRDGESRRFAFIGFRDEEDAFDCVNYFNGTFVDTSKIEVSMAKSFADPRVPQ 98
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 142/365 (38%), Gaps = 75/365 (20%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKP--------LP------------LASVRTTFLGMA 261
R I+VKN P G ++++ F P LP + + R F ++
Sbjct: 513 RDDRVILVKNFPYGTTREEIAELFLPFGKLQRLLLPPSGTIAILQFRDVPAARAAFSKIS 572
Query: 262 YIGFKD-----EKNCNKALNKNKSFWKGKQL-----NIYKYSKDNSAKYSGA-ADDNNNA 310
Y FKD EK + ++ +G +L +I K + AK SGA + +
Sbjct: 573 YKRFKDGIIYLEKGPSDCFTRDA---QGDELVESETDIQKATA-KEAKISGADLLEAQSL 628
Query: 311 SMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-- 368
+ +D VQ ++ IF++NL+++ T LT EK+ P ++
Sbjct: 629 PAADKDDHDDDDDDDDVQAGPTVS----IFIKNLNFSTTSQQLT---EKFKPFNGFVVAQ 681
Query: 369 ----PIDKETDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNV 422
P K+ KT GF F E A ++GT+ G L L K +G
Sbjct: 682 VKTKPDPKQPGKTLSMGFGFAEFKTKEQANAVISAMEGTILDGHKLQL---KLSHRQG-- 736
Query: 423 DGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-- 480
+ K NQ I+VKNLP+ D+ LF FG L V VP
Sbjct: 737 ---TSTTNASSKKKKKNQ-------GKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKK 786
Query: 481 ----PYGITGLVEFLQKNQAKAAFNSLAYTKF---KEVPLYLEWAPEGVFAEAKEKSKGK 533
G VEFL +A+ A + L + V ++E PE V + ++ ++
Sbjct: 787 FDKSARGF-AFVEFLLPKEAENAMDQLQGVHLLGRRLVMEFVEQDPEDVEQQIEKMTRKV 845
Query: 534 EKEKN 538
+K+ N
Sbjct: 846 KKQVN 850
>gi|321254501|ref|XP_003193094.1| rRNA primary transcript binding protein [Cryptococcus gattii WM276]
gi|317459563|gb|ADV21307.1| rRNA primary transcript binding protein, putative [Cryptococcus
gattii WM276]
Length = 773
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 135/347 (38%), Positives = 190/347 (54%), Gaps = 21/347 (6%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS+ ILVKN+PY T L LF P G L RVL+PP G G+VEF A AF +LA
Sbjct: 418 RSQTTILVKNIPYGTSIQSLTDLFAPHGKLTRVLLPPAGTLGVVEFENHMDAGRAFKALA 477
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + LYLE P G+F + E G E+K+E A + + E
Sbjct: 478 YRRLGNAVLYLEKGPVGMF----------KSETAPGSGPMSTEQKREEEA-----KALAE 522
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
E++ E + E +TL++K LNF +T ++ + V K DPK PG+
Sbjct: 523 KVESLPEQPDPTDEAGSTLFLKGLNFATTTAHLQTVLSNIPGFSFARVQMKPDPKRPGEK 582
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
LSMGYGFV F T+E+ +ALK L+ +D +E++ + R E + T K + K
Sbjct: 583 LSMGYGFVGFKTKEAATKALKALEGFEIDGKNLEVRFAQRGAEDDRETKKAGDAEGGKTK 642
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFITKNE 740
+K+LV+N+PF+A + +V ELF A+G+LK +RLP+K V G+ RGF F+EF T E
Sbjct: 643 STKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTE 702
Query: 741 AKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTAVGL 787
A RAM+AL + THL GR LVL+WA E + V D++ + G G+
Sbjct: 703 AARAMEAL-KHTHLLGRHLVLQWANEGEEV-DVKGLREKVKGEVRGM 747
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I + R+FVRNL++ T + L+ F YG + E LP+ + T + G A + F E A
Sbjct: 221 ILSTSRLFVRNLAFITTSESLSTHFSTYGRIDECHLPVSQTTGEPLGTAFLQFHNAEDAL 280
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN-EGNVDG 424
AY+ LD T F GR+LH++PG+ K EG V G
Sbjct: 281 SAYKALDKTTFQGRLLHVLPGRAKPGQEGAVGG 313
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 27/175 (15%)
Query: 242 KAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSF-WKGKQLNIYKYSKDNSAKY 300
+ KP P +G ++GFK ++ KAL + F GK L + ++++
Sbjct: 569 RVQMKPDPKRPGEKLSMGYGFVGFKTKEAATKALKALEGFEIDGKNLEV-RFAQ------ 621
Query: 301 SGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
GA DD + + KS ++ V+NL + T+ D+ +LF Y
Sbjct: 622 RGAEDDRETKKAGDAEGGKTKST--------------KVLVKNLPFEATKKDVRELFSAY 667
Query: 361 GPLAEVIL-----PIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
G L + L P T+GFA + F A +A + L T LGR L L
Sbjct: 668 GQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTEAARAMEALKHTHLLGRHLVL 722
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 139/363 (38%), Gaps = 52/363 (14%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEK 269
P R TI+VKN+P G + L F P LP A + + F++
Sbjct: 414 PRVPRSQTTILVKNIPYGTSIQSLTDLFAPHGKLTRVLLPPAGT------LGVVEFENHM 467
Query: 270 NCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
+ +A K ++ + +Y S A + S E + + K+ + V+
Sbjct: 468 DAGRAF-KALAYRRLGNAVLYLEKGPVGMFKSETAPGSGPMSTEQKREEEAKALAEKVES 526
Query: 330 ----AEDIAESGR-IFVRNLSYTVTEDDLTKLFEKYG--PLAEVILPIDKETDKTK---G 379
+ E+G +F++ L++ T L + A V + D + K G
Sbjct: 527 LPEQPDPTDEAGSTLFLKGLNFATTTAHLQTVLSNIPGFSFARVQMKPDPKRPGEKLSMG 586
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFN 439
+ V F E AT+A + L+G G+ L V +R+
Sbjct: 587 YGFVGFKTKEAATKALKALEGFEIDGKNLE------------VRFAQRGAEDDRETKKAG 634
Query: 440 QVVEARSKRI-ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGI---TG--------L 487
++K +LVKNLP+ D++ LF +G L + +P + TG
Sbjct: 635 DAEGGKTKSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAF 694
Query: 488 VEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEE 547
+EF +A A +L +T L L+WA EG + K +EK K E G EG
Sbjct: 695 LEFTTHTEAARAMEALKHTHLLGRHLVLQWANEGEEVDVKGL---REKVKGEVRGMEGGG 751
Query: 548 EKK 550
++K
Sbjct: 752 DRK 754
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 44/235 (18%)
Query: 569 VEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
+E + R P TT+ +KN+ + ++ S+ F G + V + P L
Sbjct: 409 LESLQPRVPRSQTTILVKNIPYGTSIQSLTDLFAPHGKLTRVLL-------PPAGTL--- 458
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQIELKR------------------SNRNLESEA 670
G V+F +A K L L + L++ + + E EA
Sbjct: 459 -GVVEFENHMDAGRAFKALAYRRLGNAVLYLEKGPVGMFKSETAPGSGPMSTEQKREEEA 517
Query: 671 TTVKRKSSNVAKQ------TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL-----PK 719
+ K ++ +Q GS + ++ + F + ++ + F R+ PK
Sbjct: 518 KALAEKVESLPEQPDPTDEAGSTLFLKGLNFATTTAHLQTVLSNIPGFSFARVQMKPDPK 577
Query: 720 KMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIR 774
+ G L G+GFV F TK A +A+KAL + + G+ L + +A+ ED R
Sbjct: 578 R-PGEKLSMGYGFVGFKTKEAATKALKAL-EGFEIDGKNLEVRFAQRG--AEDDR 628
>gi|58265434|ref|XP_569873.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|134109003|ref|XP_776616.1| hypothetical protein CNBC1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818289|sp|P0CR17.1|MRD1_CRYNB RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|338818290|sp|P0CR16.1|MRD1_CRYNJ RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|50259296|gb|EAL21969.1| hypothetical protein CNBC1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226105|gb|AAW42566.1| rRNA primary transcript binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 769
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 190/347 (54%), Gaps = 21/347 (6%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS+ ILVKN+PY T L LF P G L RVL+PP G G+VEF A AF +LA
Sbjct: 414 RSQTTILVKNIPYGTSIQSLTDLFAPHGKLTRVLLPPAGTLGVVEFENHMDAGRAFKALA 473
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + LYLE P G+F + E G E+K+E A + + E
Sbjct: 474 YRRLGNAVLYLEKGPVGMF----------KSETAPGVGPISTEQKREEEA-----KALAE 518
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
E++ E + E +TL++K LNF +T ++ + V K DPK PG+
Sbjct: 519 KVESLPEQPDPTDEAGSTLFLKGLNFTTTTPHLQTVLSHIPGFSFARVQMKPDPKRPGEK 578
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
LSMGYGFV F T+E+ +ALK L+ +D +E+K + R E + T K + K
Sbjct: 579 LSMGYGFVGFKTKEAATKALKALEGFEIDGKSLEVKFAQRGAEDDRETKKGGDAEGGKTK 638
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFITKNE 740
+K+LV+N+PF+A + +V ELF A+G+LK +RLP+K V G+ RGF F+EF T E
Sbjct: 639 STKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTE 698
Query: 741 AKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTAVGL 787
A RAM+AL + THL GR LVL+WA E + V DI+ + G G+
Sbjct: 699 AARAMEAL-KHTHLLGRHLVLQWANEGEEV-DIKGLREKVKGEVRGM 743
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I + R+FVRNL++ T + L+ F YG + E LP+ + T + G A + F E A
Sbjct: 217 ILSTSRLFVRNLAFITTSESLSSHFSTYGRIDECHLPVSQTTGEPLGTAFLQFHNAEDAL 276
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENE-------GNVDGKV 426
AY+ LD T+F GR+LH++PG+ K + G VDGKV
Sbjct: 277 AAYKALDKTIFQGRLLHVLPGRAKPGQEGAAAGSGVVDGKV 317
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 27/175 (15%)
Query: 242 KAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSF-WKGKQLNIYKYSKDNSAKY 300
+ KP P +G ++GFK ++ KAL + F GK L + K+++
Sbjct: 565 RVQMKPDPKRPGEKLSMGYGFVGFKTKEAATKALKALEGFEIDGKSLEV-KFAQ------ 617
Query: 301 SGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
GA DD + + KS ++ V+NL + T+ D+ +LF Y
Sbjct: 618 RGAEDDRETKKGGDAEGGKTKST--------------KVLVKNLPFEATKKDVRELFSAY 663
Query: 361 GPLAEVIL-----PIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
G L + L P T+GFA + F A +A + L T LGR L L
Sbjct: 664 GQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTEAARAMEALKHTHLLGRHLVL 718
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 44/253 (17%)
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
E T E+ ++ E +E + R P TT+ +KN+ + ++ S+ F G + V
Sbjct: 387 ETTVIEETKKYFEEAGIVLESLQPRVPRSQTTILVKNIPYGTSIQSLTDLFAPHGKLTRV 446
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKR--------- 661
+ P L G V+F +A K L L + L++
Sbjct: 447 LL-------PPAGTL----GVVEFENHMDAGRAFKALAYRRLGNAVLYLEKGPVGMFKSE 495
Query: 662 ---------SNRNLESEATTVKRKSSNVAKQ------TGSKILVRNIPFQAKQSEVEELF 706
+ + E EA + K ++ +Q GS + ++ + F ++ +
Sbjct: 496 TAPGVGPISTEQKREEEAKALAEKVESLPEQPDPTDEAGSTLFLKGLNFTTTTPHLQTVL 555
Query: 707 KAFGELKFVRL-----PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
F R+ PK+ G L G+GFV F TK A +A+KAL + + G+ L +
Sbjct: 556 SHIPGFSFARVQMKPDPKR-PGEKLSMGYGFVGFKTKEAATKALKAL-EGFEIDGKSLEV 613
Query: 762 EWAEEADNVEDIR 774
++A+ ED R
Sbjct: 614 KFAQR--GAEDDR 624
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 120/283 (42%), Gaps = 42/283 (14%)
Query: 43 TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF-SSRIKVEKCSNLGDTTK 101
T+TD +L RRFAF+GY ++AQ ++F+ TY F ++KV+
Sbjct: 54 TITDTKLVPK-----RRFAFVGYKDAEEAQKVKEWFDGTYAFGGGKVKVD---------- 98
Query: 102 PKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPT--FSDFLQ-LHGKDV 158
+ K P + KL+ + K + +K+ + + K +P +F+ + G D
Sbjct: 99 ---FVKDEPLKTG-DKLNR---GEKSKEKRSKEGRDNVQEKQEPNKRLQEFMSVMKGVDP 151
Query: 159 SKLLP---LSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVS 215
+ P S +G +KE+ + + ++ +D + + + +PS P +S
Sbjct: 152 AMASPEASTSTAEGTKKEKSVKGKEKSEEPEEAEADDDDAAWLRRRQAALEGEPSTPQLS 211
Query: 216 KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKD 267
+ V+NL + L ++F LP++ LG A++ F +
Sbjct: 212 ADEQLILSTSRLFVRNLAFITTSESLSSHFSTYGRIDECHLPVSQTTGEPLGTAFLQFHN 271
Query: 268 EKNCNKALNK-NKSFWKGKQLNIY----KYSKDNSAKYSGAAD 305
++ A +K+ ++G+ L++ K ++ +A SG D
Sbjct: 272 AEDALAAYKALDKTIFQGRLLHVLPGRAKPGQEGAAAGSGVVD 314
>gi|449544221|gb|EMD35195.1| hypothetical protein CERSUDRAFT_116663 [Ceriporiopsis subvermispora
B]
Length = 788
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 185/343 (53%), Gaps = 25/343 (7%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS IILVKN+PY T L++LFEP G L RVL+PP G +VEF + K AF +LA
Sbjct: 444 RSDTIILVKNIPYGTSAEALRSLFEPHGTLRRVLIPPAGTLAVVEFEHADDGKRAFKALA 503
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP- 563
Y + +YLE P G+FAE G + ++ A + +P
Sbjct: 504 YRRLGNAVMYLEKGPMGMFAEGSAAPSA------------GGDPAIKSAASKAEPVKLPD 551
Query: 564 EVEENVEEDEEREPEP----DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
++ +ED E EP +TL++KNL+F +T + + A V K P
Sbjct: 552 QIAAAADEDRATEDEPPLSSGSTLFVKNLSFATTSAGLSAIARHLPGFAFARVQMKPSPN 611
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN 679
PG+ LSMGYGFV F T++ + K L+ + LD H + +K + R E +A K+ +
Sbjct: 612 EPGERLSMGYGFVGFKTKDDAKRGAKALEGTVLDGHALSVKWAGRGTEDDA-----KAED 666
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
K G+K++V+N+PF+A + ++ ELF A +LK VRLP+K RGF F+EF T
Sbjct: 667 AVKAKGTKMIVKNVPFEATKKDIRELFSAHAQLKSVRLPRKF--DHRARGFAFLEFTTHA 724
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFG 782
EA RA A + THL GR LVLEWAE+ +++ +R++ +G
Sbjct: 725 EAARAY-ATLRHTHLLGRHLVLEWAEDTQDIDALRQKAGVGYG 766
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 75/130 (57%), Gaps = 14/130 (10%)
Query: 304 ADDNNNASMENIKAKHWKSQEDSVQFAED-----IAESGRIFVRNLSYTVTEDDLTKLFE 358
+DD +A+ E A D V ED I E+GR+F+RNLSYT T+++L +LF
Sbjct: 224 SDDEADAATEGSHA----DDTDKVAVTEDPLKVTILETGRLFLRNLSYTCTDEELKQLFS 279
Query: 359 KYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP-----G 413
YG +A+V +P+D T + KG A VTF P A A++ LD F GR+LH++P G
Sbjct: 280 PYGEIAQVHIPVDPLTKQPKGLAYVTFAQPSSAVAAFEALDKASFQGRLLHVLPAVDRRG 339
Query: 414 KPKENEGNVD 423
K KE EG D
Sbjct: 340 KEKEGEGAGD 349
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 29 ITQEQLKAKFEEK----GTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
+TQ+ L+A FE K GT+TDV++ +G RRF F+GY +A+ A ++N T+V
Sbjct: 13 LTQQGLRAHFESKDGPGGTLTDVKVVLRPDGTSRRFGFLGYKTPAEAERAKKWYNRTFVD 72
Query: 85 SSRIKVEKCSNLGDT 99
SRI VE + D
Sbjct: 73 GSRISVEVIEGVKDA 87
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 86/215 (40%), Gaps = 52/215 (24%)
Query: 212 PPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLP-LASVRTTF------------L 258
PP+S T+ VKNL L A + LP A R +
Sbjct: 567 PPLSSG-------STLFVKNLSFATTSAGLSAIARHLPGFAFARVQMKPSPNEPGERLSM 619
Query: 259 GMAYIGFK---DEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENI 315
G ++GFK D K KAL +G L+ + S K++G +++ + + +
Sbjct: 620 GYGFVGFKTKDDAKRGAKAL-------EGTVLDGHALS----VKWAGRGTEDDAKAEDAV 668
Query: 316 KAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETD 375
KAK K + V+N+ + T+ D+ +LF + L V LP K
Sbjct: 669 KAKGTK-----------------MIVKNVPFEATKKDIRELFSAHAQLKSVRLP-RKFDH 710
Query: 376 KTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+ +GFA + F A +AY L T LGR L L
Sbjct: 711 RARGFAFLEFTTHAEAARAYATLRHTHLLGRHLVL 745
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 121/314 (38%), Gaps = 84/314 (26%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNS 502
+ ++NL Y +LK LF P+G++ +V +P P G+ V F Q + A AAF +
Sbjct: 260 LFLRNLSYTCTDEELKQLFSPYGEIAQVHIPVDPLTKQPKGLA-YVTFAQPSSAVAAFEA 318
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
L F+ L++ A + +GKEK EGE + ++ T +E
Sbjct: 319 LDKASFQGRLLHVLPAVD---------RRGKEK-----EGEGAGDAGRKKTLKE------ 358
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSI------RRHFKKCGPIASVTVARKK 616
E D +R+ L NS D++ R H K +
Sbjct: 359 -------ERDAKRKASAGREFNWAMLYMNS--DAVVSSVADRLHISKSEIL--------- 400
Query: 617 DPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK 676
DP S N A+K+ +L E I ++ + LE +
Sbjct: 401 DPTSD-------------------NAAVKL----ALAETHI-IQETKTFLEENGVVMSSL 436
Query: 677 S-SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
S K++ + ILV+NIP+ + LF+ G L+ V +P VEF
Sbjct: 437 SPGQPIKRSDTIILVKNIPYGTSAEALRSLFEPHGTLRRVLIPPAGT-------LAVVEF 489
Query: 736 ITKNEAKRAMKALC 749
++ KRA KAL
Sbjct: 490 EHADDGKRAFKALA 503
>gi|38345802|emb|CAE03574.2| OSJNBa0085I10.19 [Oryza sativa Japonica Group]
gi|38568013|emb|CAE05198.3| OSJNBa0070C17.5 [Oryza sativa Japonica Group]
Length = 904
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 201/344 (58%), Gaps = 37/344 (10%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS +ILVKNLPY + DL +F G L ++++PP + LV F++ +A+ AF L
Sbjct: 559 RSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRVFALVVFVEATEARHAFKKLL 618
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
YT++K+ PLYLEWAPE + + E+++K+ + + +
Sbjct: 619 YTRYKDTPLYLEWAPENILSPTSAPV---------------EDDEKDVVGDRIVTKAI-- 661
Query: 565 VEENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKKD 617
VE+ VE E +PD ++++KNLNF ++++S+++HF K G + S TV KK
Sbjct: 662 VEQTVEGVSAEEIDPDRVESRSVFVKNLNFKTSDESLKQHFSTKLKSGSLKSATV--KKH 719
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
K+ G+ +SMG+GFV+F + E+ K LQ + LD H + L+ + + +
Sbjct: 720 IKN-GKNVSMGFGFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQT------K 772
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
N ++ +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVEF+T
Sbjct: 773 KNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEFVT 829
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
K EA+ A++AL STHLYGR LV+E A+E + +E++R RT F
Sbjct: 830 KQEAQNALQALA-STHLYGRHLVIERAKEGETLEELRARTAAQF 872
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 33 QLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEK 92
+L+ F KG VTD ++ T +GK R+FAF+G+ ++A+ AL YFNNTY+ + +I E
Sbjct: 38 RLREVFSRKGEVTDAKVIRTKDGKSRQFAFVGFRTNEEAEEALKYFNNTYIDTCKITCEV 97
Query: 93 CSNLGDTTKPKSWSKYAPDSSAYQ-----KLHNI-APKQDLKPEHTKDSKPGKK--SKND 144
+GD P+ WS+++ Y K ++ AP + K + D G K + +D
Sbjct: 98 ARKIGDPEAPRPWSRHSLKKPEYNSKDKTKTGDVSAPLKSSKGQKVSDDVGGSKGSAASD 157
Query: 145 PTFSDFLQL 153
P F +FL++
Sbjct: 158 PKFQEFLEV 166
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 139/331 (41%), Gaps = 60/331 (18%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCN 272
KR H I+VKNLP ++DL F+ LP V F + ++ + ++
Sbjct: 558 KRSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRV---FALVVFVEATEARHAF 614
Query: 273 KALNKNKSFWKGKQLNIY-KYSKDN--SAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
K L + + K +Y +++ +N S + DD + + I K Q
Sbjct: 615 KKL----LYTRYKDTPLYLEWAPENILSPTSAPVEDDEKDVVGDRIVTKAIVEQTVEGVS 670
Query: 330 AEDI----AESGRIFVRNLSYTVTEDDLTKLFE---KYGPL--AEVILPIDKETDKTKGF 380
AE+I ES +FV+NL++ +++ L + F K G L A V I + + GF
Sbjct: 671 AEEIDPDRVESRSVFVKNLNFKTSDESLKQHFSTKLKSGSLKSATVKKHIKNGKNVSMGF 730
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLI------PGKPKENEGNVDGKVHCCISERK 434
V F E AT + L GTV G L L G+ K+NE +
Sbjct: 731 GFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQTKKNEKD------------- 777
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT---GLVEF 490
+S +LV+N+ + DL+ LF PFG + + +P +G VEF
Sbjct: 778 ----------KSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEF 827
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEG 521
+ K +A+ A +LA T L +E A EG
Sbjct: 828 VTKQEAQNALQALASTHLYGRHLVIERAKEG 858
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E+GR+F NL Y TE DL +L +YG + + + +DK T + G V F +P+ A +A
Sbjct: 368 ETGRLFFCNLPYATTEGDLVELCSQYGDVDQARIVVDKTTKLSTGRGYVLFSLPDSAVRA 427
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
+ LD + F GR+L + KP N+ K+ E+K+ Q ++ R
Sbjct: 428 LE-LDNSSFQGRLLRVKAAKPLNNK-----KIESSYEEKKMSLKQQKLDQR 472
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ VRN+++ TE DL +LF +G + + LP+ + +GFA V F+ + A A
Sbjct: 780 STKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPM--KFGSHRGFAFVEFVTKQEAQNAL 837
Query: 396 QHLDGTVFLGRMLHLIPGKPKENE 419
Q L T GR HL+ + KE E
Sbjct: 838 QALASTHLYGR--HLVIERAKEGE 859
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 16/89 (17%)
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
K++ ILV+N+P+ + + ++ +F+ G L + LP V F V F+ EA
Sbjct: 558 KRSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRV-------FALVVFVEATEA 610
Query: 742 KRAMKALCQSTHLYGRR----LVLEWAEE 766
+ A K L LY R L LEWA E
Sbjct: 611 RHAFKKL-----LYTRYKDTPLYLEWAPE 634
>gi|242077146|ref|XP_002448509.1| hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
gi|241939692|gb|EES12837.1| hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
Length = 620
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 204/346 (58%), Gaps = 36/346 (10%)
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNS 502
E RS +ILVKNLP+ + +L A+F+ G L ++++PP + LV F++ +A+ AF
Sbjct: 272 EKRSNHVILVKNLPFNSTEEELAAMFQKHGSLDKIILPPTRVFALVVFVEATEARHAFKK 331
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
L Y ++K+ PLYLEWAPE + + + E+EKN E E + N
Sbjct: 332 LLYARYKDTPLYLEWAPENILSPT--SAPVDEEEKN---------EVGERIVTKAN---- 376
Query: 563 PEVEENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARK 615
+E+ VE + +PD ++++KNLNF +T++S+++HF K G + S TV K
Sbjct: 377 --IEQTVEGVSAEDIDPDRVESRSVFVKNLNFKTTDESLKQHFSAKLKSGSLKSATV--K 432
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR 675
K K G+ +SMG+GFV+F + E+ K LQ + LD H + L+ + + +A
Sbjct: 433 KHVK-KGKTVSMGFGFVEFDSVETATGVCKDLQGTVLDGHALILQLCHGKKDGQAA---- 487
Query: 676 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
N ++ +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVE+
Sbjct: 488 -KKNGKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEY 543
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+TK EA+ A++AL STHLYGR LV+E A+E + +E++R RT F
Sbjct: 544 VTKQEAQNALQALA-STHLYGRHLVIERAKEGETLEELRARTAAQF 588
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 138/327 (42%), Gaps = 51/327 (15%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCN 272
KR H I+VKNLP +++L A F+ LP V F + ++ + ++
Sbjct: 273 KRSNHVILVKNLPFNSTEEELAAMFQKHGSLDKIILPPTRV---FALVVFVEATEARHAF 329
Query: 273 KALNKNKSFWKGKQLNIY-KYSKDNSAKYSGAADD--NNNASMENIKAKHWKSQEDSVQF 329
K L + + K +Y +++ +N + A D N E I K Q
Sbjct: 330 KKL----LYARYKDTPLYLEWAPENILSPTSAPVDEEEKNEVGERIVTKANIEQTVEGVS 385
Query: 330 AEDI----AESGRIFVRNLSYTVTEDDLTKLFE---KYGPL--AEVILPIDKETDKTKGF 380
AEDI ES +FV+NL++ T++ L + F K G L A V + K + GF
Sbjct: 386 AEDIDPDRVESRSVFVKNLNFKTTDESLKQHFSAKLKSGSLKSATVKKHVKKGKTVSMGF 445
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGR--MLHLIPGKPKENEGNVDGKVHCCISERKLDAF 438
V F E AT + L GTV G +L L GK +GK
Sbjct: 446 GFVEFDSVETATGVCKDLQGTVLDGHALILQLCHGKKDGQAAKKNGK------------- 492
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT---GLVEFLQKN 494
+S +LV+N+ + DL+ LF PFG + + +P +G VE++ K
Sbjct: 493 -----DKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTKQ 547
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEG 521
+A+ A +LA T L +E A EG
Sbjct: 548 EAQNALQALASTHLYGRHLVIERAKEG 574
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E+GR+++ NL Y +EDDL +L +YG + + + +DK T + G V F +P+ A +A
Sbjct: 82 ETGRLYICNLPYATSEDDLVELCRQYGDVEQAHIVVDKTTKLSTGRGYVLFCLPDSAVRA 141
Query: 395 YQHLDGTVFLGRMLHLIPGKPKEN 418
LD + F GR+L + KP N
Sbjct: 142 LDELDNSSFQGRVLRVKAAKPLNN 165
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 145/381 (38%), Gaps = 87/381 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+NL + TE++L +F+K+G L ++ILP T+ FALV F+ A A++ L
Sbjct: 279 ILVKNLPFNSTEEELAAMFQKHGSLDKIILP------PTRVFALVVFVEATEARHAFKKL 332
Query: 399 DGTVFLGRMLHLIPGKPKE----NEGNVDGKVHCCISERKLDAFN--QVVEARS------ 446
+ L+L P+ VD + + ER + N Q VE S
Sbjct: 333 LYARYKDTPLYL-EWAPENILSPTSAPVDEEEKNEVGERIVTKANIEQTVEGVSAEDIDP 391
Query: 447 ----KRIILVKNLPYRTLPTDLKALFEP---FGDLGRVLVPPY---GIT-----GLVEFL 491
R + VKNL ++T LK F G L V + G T G VEF
Sbjct: 392 DRVESRSVFVKNLNFKTTDESLKQHFSAKLKSGSLKSATVKKHVKKGKTVSMGFGFVEFD 451
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
A L T L L+ +A +K+ GK+K
Sbjct: 452 SVETATGVCKDLQGTVLDGHALILQLCHGKKDGQAAKKN-GKDK---------------- 494
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
T L ++N+ F +TE +R+ F G I S+
Sbjct: 495 ---------------------------SSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLR 527
Query: 612 VARKKDPKSPGQFLS-MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
+ P +F S G+ FV++ T++ AL+ L ++ L + ++R+ E
Sbjct: 528 L--------PMKFGSHRGFAFVEYVTKQEAQNALQALASTHLYGRHLVIERAKEGETLEE 579
Query: 671 TTVKRKSSNVAKQTGSKILVR 691
+ + V + +G + L R
Sbjct: 580 LRARTAAQFVDEHSGFQSLSR 600
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ VRN+++ TE DL +LF +G + + LP+ + +GFA V ++ + A A
Sbjct: 496 STKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPM--KFGSHRGFAFVEYVTKQEAQNAL 553
Query: 396 QHLDGTVFLGRMLHLIPGKPKENE 419
Q L T GR HL+ + KE E
Sbjct: 554 QALASTHLYGR--HLVIERAKEGE 575
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 16/146 (10%)
Query: 535 KEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTE 594
KE + +G E E +E+ +ED + G P DE++ LYI NL + ++E
Sbjct: 45 KESEDLDGRRRETEIREDQEKED-ENGAPIT------DEKKLALETGRLYICNLPYATSE 97
Query: 595 DSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDE 654
D + ++ G + + K K LS G G+V F +S +AL L NSS
Sbjct: 98 DDLVELCRQYGDVEQAHIVVDKTTK-----LSTGRGYVLFCLPDSAVRALDELDNSSFQG 152
Query: 655 HQIELKRS----NRNLESEATTVKRK 676
+ +K + N LES TV K
Sbjct: 153 RVLRVKAAKPLNNNKLESNHETVVEK 178
>gi|125591601|gb|EAZ31951.1| hypothetical protein OsJ_16124 [Oryza sativa Japonica Group]
Length = 867
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 201/344 (58%), Gaps = 37/344 (10%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS +ILVKNLPY + DL +F G L ++++PP + LV F++ +A+ AF L
Sbjct: 522 RSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRVFALVVFVEATEARHAFKKLL 581
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
YT++K+ PLYLEWAPE + + E+++K+ + + +
Sbjct: 582 YTRYKDTPLYLEWAPENILSPTSAPV---------------EDDEKDVVGDRIVTKAI-- 624
Query: 565 VEENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKKD 617
VE+ VE E +PD ++++KNLNF ++++S+++HF K G + S TV KK
Sbjct: 625 VEQTVEGVSAEEIDPDRVESRSVFVKNLNFKTSDESLKQHFSTKLKSGSLKSATV--KKH 682
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
K+ G+ +SMG+GFV+F + E+ K LQ + LD H + L+ + + +
Sbjct: 683 IKN-GKNVSMGFGFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQT------K 735
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
N ++ +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVEF+T
Sbjct: 736 KNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEFVT 792
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
K EA+ A++AL STHLYGR LV+E A+E + +E++R RT F
Sbjct: 793 KQEAQNALQALA-STHLYGRHLVIERAKEGETLEELRARTAAQF 835
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 139/331 (41%), Gaps = 60/331 (18%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCN 272
KR H I+VKNLP ++DL F+ LP V F + ++ + ++
Sbjct: 521 KRSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRV---FALVVFVEATEARHAF 577
Query: 273 KALNKNKSFWKGKQLNIY-KYSKDN--SAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
K L + + K +Y +++ +N S + DD + + I K Q
Sbjct: 578 KKL----LYTRYKDTPLYLEWAPENILSPTSAPVEDDEKDVVGDRIVTKAIVEQTVEGVS 633
Query: 330 AEDI----AESGRIFVRNLSYTVTEDDLTKLFE---KYGPL--AEVILPIDKETDKTKGF 380
AE+I ES +FV+NL++ +++ L + F K G L A V I + + GF
Sbjct: 634 AEEIDPDRVESRSVFVKNLNFKTSDESLKQHFSTKLKSGSLKSATVKKHIKNGKNVSMGF 693
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLI------PGKPKENEGNVDGKVHCCISERK 434
V F E AT + L GTV G L L G+ K+NE +
Sbjct: 694 GFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQTKKNEKD------------- 740
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT---GLVEF 490
+S +LV+N+ + DL+ LF PFG + + +P +G VEF
Sbjct: 741 ----------KSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEF 790
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEG 521
+ K +A+ A +LA T L +E A EG
Sbjct: 791 VTKQEAQNALQALASTHLYGRHLVIERAKEG 821
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 54 EGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYA---P 110
+GK R+FAF+G+ ++A+ AL YFNNTY+ + +I E +GD P+ WS+++ P
Sbjct: 22 DGKSRQFAFVGFRTNEEAEEALKYFNNTYIDTCKITCEVARKIGDPEAPRPWSRHSLKKP 81
Query: 111 DSSAYQKLHN---IAPKQDLKPEHTKDSKPGKK--SKNDPTFSDFLQL 153
+ ++ K AP + K + D G K + +DP F +FL++
Sbjct: 82 EYNSKDKTKTGDVSAPLKSSKGQKVSDDVGGSKGSAASDPKFQEFLEV 129
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E+GR+F NL Y TE DL +L +YG + + + +DK T + G V F +P+ A +A
Sbjct: 331 ETGRLFFCNLPYATTEGDLVELCSQYGDVDQARIVVDKTTKLSTGRGYVLFSLPDSAVRA 390
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
+ LD + F GR+L + KP N+ K+ E+K+ Q ++ R
Sbjct: 391 LE-LDNSSFQGRLLRVKAAKPLNNK-----KIESSYEEKKMSLKQQKLDQR 435
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ VRN+++ TE DL +LF +G + + LP+ + +GFA V F+ + A A
Sbjct: 743 STKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPM--KFGSHRGFAFVEFVTKQEAQNAL 800
Query: 396 QHLDGTVFLGRMLHLIPGKPKENE 419
Q L T GR HL+ + KE E
Sbjct: 801 QALASTHLYGR--HLVIERAKEGE 822
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 16/89 (17%)
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
K++ ILV+N+P+ + + ++ +F+ G L + LP V F V F+ EA
Sbjct: 521 KRSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRV-------FALVVFVEATEA 573
Query: 742 KRAMKALCQSTHLYGRR----LVLEWAEE 766
+ A K L LY R L LEWA E
Sbjct: 574 RHAFKKL-----LYTRYKDTPLYLEWAPE 597
>gi|125549686|gb|EAY95508.1| hypothetical protein OsI_17353 [Oryza sativa Indica Group]
Length = 904
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 201/344 (58%), Gaps = 37/344 (10%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS +ILVKNLPY + DL +F G L ++++PP + LV F++ +A+ AF L
Sbjct: 559 RSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRVFALVVFVEATEARHAFKKLL 618
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
YT++K+ PLYLEWAPE + + E+++K+ + + +
Sbjct: 619 YTRYKDTPLYLEWAPENILSPTSAPV---------------EDDEKDVVGDRIVTKAI-- 661
Query: 565 VEENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKKD 617
VE+ VE E +PD ++++KNLNF ++++S+++HF K G + S TV KK
Sbjct: 662 VEQTVEGVSAEEIDPDRVESRSVFVKNLNFKTSDESLKQHFSTKLKSGSLKSATV--KKH 719
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
K+ G+ +SMG+GFV+F + E+ K LQ + LD H + L+ + + +
Sbjct: 720 IKN-GKNVSMGFGFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQT------K 772
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
N ++ +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVEF+T
Sbjct: 773 KNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEFVT 829
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
K EA+ A++AL STHLYGR LV+E A+E + +E++R RT F
Sbjct: 830 KQEAQNALQALA-STHLYGRHLVIERAKEGETLEELRARTAAQF 872
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 33 QLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEK 92
+L+ F KG VTD ++ T +GK R+FAF+G+ ++A+ AL YFNNTY+ + +I E
Sbjct: 38 RLREVFSRKGEVTDAKVIRTKDGKSRQFAFVGFRTNEEAEEALKYFNNTYIDTCKITCEV 97
Query: 93 CSNLGDTTKPKSWSKYAPDSSAYQ-----KLHNI-APKQDLKPEHTKDSKPGKK--SKND 144
+GD P+ WS+++ Y K ++ AP + K + D G K + +D
Sbjct: 98 ARKIGDPEAPRPWSRHSLKKPEYNSKDKTKTGDVSAPLKSSKGQKVSDDVGGSKGSAASD 157
Query: 145 PTFSDFLQL 153
P F +FL++
Sbjct: 158 PKFQEFLEV 166
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 139/331 (41%), Gaps = 60/331 (18%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCN 272
KR H I+VKNLP ++DL F+ LP V F + ++ + ++
Sbjct: 558 KRSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRV---FALVVFVEATEARHAF 614
Query: 273 KALNKNKSFWKGKQLNIY-KYSKDN--SAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
K L + + K +Y +++ +N S + DD + + I K Q
Sbjct: 615 KKL----LYTRYKDTPLYLEWAPENILSPTSAPVEDDEKDVVGDRIVTKAIVEQTVEGVS 670
Query: 330 AEDI----AESGRIFVRNLSYTVTEDDLTKLFE---KYGPL--AEVILPIDKETDKTKGF 380
AE+I ES +FV+NL++ +++ L + F K G L A V I + + GF
Sbjct: 671 AEEIDPDRVESRSVFVKNLNFKTSDESLKQHFSTKLKSGSLKSATVKKHIKNGKNVSMGF 730
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLI------PGKPKENEGNVDGKVHCCISERK 434
V F E AT + L GTV G L L G+ K+NE +
Sbjct: 731 GFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQTKKNEKD------------- 777
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT---GLVEF 490
+S +LV+N+ + DL+ LF PFG + + +P +G VEF
Sbjct: 778 ----------KSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEF 827
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEG 521
+ K +A+ A +LA T L +E A EG
Sbjct: 828 VTKQEAQNALQALASTHLYGRHLVIERAKEG 858
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E+GR+F NL Y TE DL +L +YG + + + +DK T + G V F +P+ A +A
Sbjct: 368 ETGRLFFCNLPYATTEGDLVELCSQYGDVDQARIVVDKTTKLSTGRGYVLFSLPDSAVRA 427
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
+ LD + F GR+L + KP N+ K+ E+K+ Q ++ R
Sbjct: 428 LE-LDNSSFQGRLLRVKAAKPLNNK-----KIESSYEEKKMSLKQQKLDQR 472
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ VRN+++ TE DL +LF +G + + LP+ + +GFA V F+ + A A
Sbjct: 780 STKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPM--KFGSHRGFAFVEFVTKQEAQNAL 837
Query: 396 QHLDGTVFLGRMLHLIPGKPKENE 419
Q L T GR HL+ + KE E
Sbjct: 838 QALASTHLYGR--HLVIERAKEGE 859
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 628 GYGFVQFYTRESLNQALKVL--QNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTG 685
G + RE+ N A+++ + + E + L RS N+ + +++ K++
Sbjct: 503 GISKSELLDREADNLAVRIALGETHVIAETKKYLSRSGVNVAALEELASKRNEKF-KRSN 561
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
ILV+N+P+ + + ++ +F+ G L + LP V F V F+ EA+ A
Sbjct: 562 HVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRV-------FALVVFVEATEARHAF 614
Query: 746 KALCQSTHLYGRR----LVLEWAEE 766
K L LY R L LEWA E
Sbjct: 615 KKL-----LYTRYKDTPLYLEWAPE 634
>gi|224072369|ref|XP_002303703.1| predicted protein [Populus trichocarpa]
gi|222841135|gb|EEE78682.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 206/337 (61%), Gaps = 21/337 (6%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS ++LVKNLPY + +L F FG L ++++PP LV FL+ ++A+AAF LA
Sbjct: 454 RSNHVLLVKNLPYGSSEVELAEKFGKFGSLDKIILPPTKTLALVVFLEPSEARAAFKGLA 513
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y ++K VPLYLEWAP + +++ S K EK+ + GE + K E+ + +G+ E
Sbjct: 514 YKQYKGVPLYLEWAPANILSQS---STSKSDEKS--DAAVGEHDAKRVILEQ-SVEGISE 567
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
++ + + E R +L++KNLNF + ++S+++HF + + R K G+
Sbjct: 568 MDIDPDRIESR------SLFVKNLNFKTADESLKKHFSEHMKEGRIQSVRIKKHMKKGKN 621
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
+SMG+GF++F + E+ + LQ + LD H + L+ + + + +VK+ + ++
Sbjct: 622 VSMGFGFIEFDSVETATNICRDLQGTVLDGHALILQLC--HAKKDEHSVKKAGKD---KS 676
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVE++TK EA+ A
Sbjct: 677 STKLLVRNVAFEATEKDLRQLFGPFGQIKSLRLPMKF---GNHRGFAFVEYVTKQEAQNA 733
Query: 745 MKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
++AL STHLYGR LVLE A+E +++E++R RT F
Sbjct: 734 LQALS-STHLYGRHLVLERAKEGESLEELRARTAAQF 769
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 62/86 (72%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E+I E+ R+FVRNL YT ED+L + F K+G +++V L +DK+T ++KG A + + +PE
Sbjct: 257 EEILETCRLFVRNLPYTAIEDELEEHFSKFGNISQVHLVVDKDTKRSKGLAYIHYTLPES 316
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A +A + LD ++F GR+LH++P K K
Sbjct: 317 AARALEELDNSIFQGRLLHVMPAKQK 342
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 40/322 (12%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKALN 276
KR H ++VKNLP G + +L F S+ L +A + F + A
Sbjct: 453 KRSNHVLLVKNLPYGSSEVELAEKFGKF--GSLDKIILPPTKTLALVVFLEPSEARAAF- 509
Query: 277 KNKSFWKGKQLNIY-KYSKDN--SAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE-- 331
K ++ + K + +Y +++ N S + +D+ ++A++ AK ++ +E
Sbjct: 510 KGLAYKQYKGVPLYLEWAPANILSQSSTSKSDEKSDAAVGEHDAKRVILEQSVEGISEMD 569
Query: 332 ---DIAESGRIFVRNLSYTVTEDDLTKLFEKY---GPLAEVILP--IDKETDKTKGFALV 383
D ES +FV+NL++ ++ L K F ++ G + V + + K + + GF +
Sbjct: 570 IDPDRIESRSLFVKNLNFKTADESLKKHFSEHMKEGRIQSVRIKKHMKKGKNVSMGFGFI 629
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVE 443
F E AT + L GTV G L L C +++ + + +
Sbjct: 630 EFDSVETATNICRDLQGTVLDGHALIL----------------QLCHAKKDEHSVKKAGK 673
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT---GLVEFLQKNQAKAA 499
+S +LV+N+ + DL+ LF PFG + + +P +G VE++ K +A+ A
Sbjct: 674 DKSSTKLLVRNVAFEATEKDLRQLFGPFGQIKSLRLPMKFGNHRGFAFVEYVTKQEAQNA 733
Query: 500 FNSLAYTKFKEVPLYLEWAPEG 521
+L+ T L LE A EG
Sbjct: 734 LQALSSTHLYGRHLVLERAKEG 755
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 54 EGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYA 109
+GK R+FAF+G+ E +A+ A+ YFN +Y+ + RI E +GD P+ WS+Y+
Sbjct: 1 DGKSRQFAFVGFRTEREAEDAIKYFNKSYLDTCRIVCEIARKVGDPDIPRPWSRYS 56
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK 378
H K E SV+ A S ++ VRN+++ TE DL +LF +G + + LP+ + +
Sbjct: 660 HAKKDEHSVKKAGKDKSSTKLLVRNVAFEATEKDLRQLFGPFGQIKSLRLPM--KFGNHR 717
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
GFA V ++ + A A Q L T GR HL+ + KE E
Sbjct: 718 GFAFVEYVTKQEAQNALQALSSTHLYGR--HLVLERAKEGE 756
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 540 EEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRR 599
+ G + E E+T ED++ ++ DE+ E L+++NL + + ED +
Sbjct: 227 QRGNVAQAEVAEDTHAEDHENPSSTLK-----DEKEEILETCRLFVRNLPYTAIEDELEE 281
Query: 600 HFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNS 650
HF K G I+ V + KD K S G ++ + ES +AL+ L NS
Sbjct: 282 HFSKFGNISQVHLVVDKDTKR-----SKGLAYIHYTLPESAARALEELDNS 327
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
K++ +LV+N+P+ + + E+ E F FG L + LP + V F+ +EA
Sbjct: 453 KRSNHVLLVKNLPYGSSEVELAEKFGKFGSLDKIILPPT-------KTLALVVFLEPSEA 505
Query: 742 KRAMKALCQSTHLYGRRLVLEWA 764
+ A K L + G L LEWA
Sbjct: 506 RAAFKGLAYKQY-KGVPLYLEWA 527
>gi|115460478|ref|NP_001053839.1| Os04g0611500 [Oryza sativa Japonica Group]
gi|113565410|dbj|BAF15753.1| Os04g0611500, partial [Oryza sativa Japonica Group]
Length = 536
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 201/344 (58%), Gaps = 37/344 (10%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS +ILVKNLPY + DL +F G L ++++PP + LV F++ +A+ AF L
Sbjct: 191 RSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRVFALVVFVEATEARHAFKKLL 250
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
YT++K+ PLYLEWAPE + + E+++K+ + + +
Sbjct: 251 YTRYKDTPLYLEWAPENILSPTSAPV---------------EDDEKDVVGDRIVTKAI-- 293
Query: 565 VEENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKKD 617
VE+ VE E +PD ++++KNLNF ++++S+++HF K G + S TV KK
Sbjct: 294 VEQTVEGVSAEEIDPDRVESRSVFVKNLNFKTSDESLKQHFSTKLKSGSLKSATV--KKH 351
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
K+ G+ +SMG+GFV+F + E+ K LQ + LD H + L+ + + +
Sbjct: 352 IKN-GKNVSMGFGFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQT------K 404
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
N ++ +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVEF+T
Sbjct: 405 KNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEFVT 461
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
K EA+ A++AL STHLYGR LV+E A+E + +E++R RT F
Sbjct: 462 KQEAQNALQALA-STHLYGRHLVIERAKEGETLEELRARTAAQF 504
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 136/331 (41%), Gaps = 60/331 (18%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCN 272
KR H I+VKNLP ++DL F+ LP V A + F +
Sbjct: 190 KRSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRV------FALVVFVEATEAR 243
Query: 273 KALNKNKSFWKGKQLNIY-KYSKDN--SAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
A K + + K +Y +++ +N S + DD + + I K Q
Sbjct: 244 HAF-KKLLYTRYKDTPLYLEWAPENILSPTSAPVEDDEKDVVGDRIVTKAIVEQTVEGVS 302
Query: 330 AEDI----AESGRIFVRNLSYTVTEDDLTKLFE---KYGPL--AEVILPIDKETDKTKGF 380
AE+I ES +FV+NL++ +++ L + F K G L A V I + + GF
Sbjct: 303 AEEIDPDRVESRSVFVKNLNFKTSDESLKQHFSTKLKSGSLKSATVKKHIKNGKNVSMGF 362
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLI------PGKPKENEGNVDGKVHCCISERK 434
V F E AT + L GTV G L L G+ K+NE +
Sbjct: 363 GFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQTKKNEKD------------- 409
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT---GLVEF 490
+S +LV+N+ + DL+ LF PFG + + +P +G VEF
Sbjct: 410 ----------KSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEF 459
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEG 521
+ K +A+ A +LA T L +E A EG
Sbjct: 460 VTKQEAQNALQALASTHLYGRHLVIERAKEG 490
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+GR+F NL Y TE DL +L +YG + + + +DK T + G V F +P+ A +A
Sbjct: 1 TGRLFFCNLPYATTEGDLVELCSQYGDVDQARIVVDKTTKLSTGRGYVLFSLPDSAVRAL 60
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
+ LD + F GR+L + KP N+ K+ E+K+ Q ++ R
Sbjct: 61 E-LDNSSFQGRLLRVKAAKPLNNK-----KIESSYEEKKMSLKQQKLDQR 104
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ VRN+++ TE DL +LF +G + + LP+ + +GFA V F+ + A A
Sbjct: 412 STKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPM--KFGSHRGFAFVEFVTKQEAQNAL 469
Query: 396 QHLDGTVFLGRMLHLIPGKPKENE 419
Q L T GR HL+ + KE E
Sbjct: 470 QALASTHLYGR--HLVIERAKEGE 491
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 16/89 (17%)
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
K++ ILV+N+P+ + + ++ +F+ G L + LP V F V F+ EA
Sbjct: 190 KRSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRV-------FALVVFVEATEA 242
Query: 742 KRAMKALCQSTHLYGRR----LVLEWAEE 766
+ A K L LY R L LEWA E
Sbjct: 243 RHAFKKL-----LYTRYKDTPLYLEWAPE 266
>gi|260948938|ref|XP_002618766.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
gi|238848638|gb|EEQ38102.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
Length = 633
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/363 (38%), Positives = 198/363 (54%), Gaps = 22/363 (6%)
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
E +V G V ER +D + R +IILVKN PY T +++ LF +G L RVL
Sbjct: 257 EAHVIGDVRKFFEERGVDLTTFSQKERDDKIILVKNFPYGTSQEEIRDLFAEYGPLKRVL 316
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN 538
+PP G +VEF A++AF LAY FK+ LYLE P+ +F +E
Sbjct: 317 MPPAGTIAIVEFRDSPSARSAFTKLAYRMFKKAILYLEKGPKDLFV----------REPT 366
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIR 598
+E E+ ++ + + V E EE++ E P ++++KNLNF++T S+R
Sbjct: 367 SDETVSQSEKTEKPVEAKLTARDVMEDANESEEEQMAEVGPTVSVFVKNLNFSTTSASLR 426
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
F + TV K DPK G LSMG+GFV+F T+E A+ L L+ H+I+
Sbjct: 427 ELFSELPGFVVATVKTKPDPKKEGGVLSMGFGFVEFKTKEQAEAAISALDGHVLEGHRIQ 486
Query: 659 LKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP 718
LK S+R S+ K SN KI+++N+PF+A + +V ELF A+G +K VR+P
Sbjct: 487 LKISHRKSGSKPQGAKSSKSN-------KIIIKNLPFEATRKDVLELFGAYGSVKSVRVP 539
Query: 719 KKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVED-IRKR 776
KK S RGF FVE+ EA+ AM L + HL GRRLV+++AE E+DN ED I K
Sbjct: 540 KKFDKSA--RGFAFVEYTMLKEAENAMNQL-EGVHLLGRRLVMQYAEKESDNAEDEIEKM 596
Query: 777 TNR 779
T +
Sbjct: 597 TQK 599
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
A+ I ++GR+FVRN+ Y EDD +LF +YGPL EV + +D T K+KG+ V F E
Sbjct: 96 ADKILQTGRLFVRNILYDSKEDDFRELFSQYGPLKEVHIAVDTRTGKSKGYVYVQFNNNE 155
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A A+ LD +F GR+LH++ G+ K++
Sbjct: 156 DAVSAFTALDKQIFQGRLLHILAGEAKKD 184
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 125/322 (38%), Gaps = 47/322 (14%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKALNK-- 277
R I+VKN P G +++++ F PL V G +A + F+D + A K
Sbjct: 283 RDDKIILVKNFPYGTSQEEIRDLFAEYGPLKRVLMPPAGTIAIVEFRDSPSARSAFTKLA 342
Query: 278 NKSFWKG--------KQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
+ F K K L + + + D + S + A + ++ + Q
Sbjct: 343 YRMFKKAILYLEKGPKDLFVREPTSDETVSQSEKTEKPVEAKLTARDVMEDANESEEEQM 402
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-------GFAL 382
AE + + +FV+NL+++ T L +LF + V+ + + D K GF
Sbjct: 403 AE-VGPTVSVFVKNLNFSTTSASLRELFSELPGF--VVATVKTKPDPKKEGGVLSMGFGF 459
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
V F E A A LDG V G ++ IS RK + Q
Sbjct: 460 VEFKTKEQAEAAISALDGHVLEGH------------------RIQLKISHRKSGSKPQGA 501
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQA 496
++ I++KNLP+ D+ LF +G + V VP G VE+ +A
Sbjct: 502 KSSKSNKIIIKNLPFEATRKDVLELFGAYGSVKSVRVPKKFDKSARGF-AFVEYTMLKEA 560
Query: 497 KAAFNSLAYTKFKEVPLYLEWA 518
+ A N L L +++A
Sbjct: 561 ENAMNQLEGVHLLGRRLVMQYA 582
>gi|170110064|ref|XP_001886238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638822|gb|EDR03097.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 496
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/341 (38%), Positives = 192/341 (56%), Gaps = 23/341 (6%)
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
ARS ILVKN+PY T ++ +FEP G+L RVLVPP G +V+F + + A AF ++
Sbjct: 150 ARSDTTILVKNIPYGTTVEQIREMFEPHGELSRVLVPPAGTMAVVDFEKPDDAAQAFRAV 209
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
AY + +YLE P G+FAE + + + E++ + TAE
Sbjct: 210 AYRRLGSTVVYLEKGPLGMFAEGSTPAAPSTTGPSHAAIKIAEQQIPDPTAEG------- 262
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E+EE+ TTLY+KN+ F++T++ + + F + + K DPK PG
Sbjct: 263 -------EEEEQSISGGTTLYLKNIAFSTTQERLTQVFCHLPAFSFARIQTKPDPKRPGS 315
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNL-ESEATTVKRKSSNVAK 682
LSMGYGFV F ES +ALK +Q SLD H + +K + R E E VK S
Sbjct: 316 RLSMGYGFVGFKDAESARKALKSMQGFSLDGHALHVKFAGRGADEVEKEVVKGSKST--- 372
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
T +K++V+N+PF+A + ++ +LF A G LK VRLPKK RGF F++F+++ EA+
Sbjct: 373 -TTTKMIVKNVPFEATKKDIRDLFGAHGHLKSVRLPKKF--DARTRGFAFLDFVSRREAE 429
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEAD-NVEDIRKRTNRYFG 782
A AL + THL GR LVLEWAEEA+ +++ +R + FG
Sbjct: 430 NAYDAL-RHTHLLGRHLVLEWAEEAEQDLDVLRMKAGVGFG 469
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 41/212 (19%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
T+ +KN+ ++ L F LP A ++T +G ++GFKD ++
Sbjct: 274 TLYLKNIAFSTTQERLTQVFCHLPAFSFARIQTKPDPKRPGSRLSMGYGFVGFKDAESAR 333
Query: 273 KALNKNKSF-WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE 331
KAL + F G L++ K++G D +E K KS +
Sbjct: 334 KALKSMQGFSLDGHALHV---------KFAGRGADE----VEKEVVKGSKSTTTT----- 375
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
++ V+N+ + T+ D+ LF +G L V LP K +T+GFA + F+ A
Sbjct: 376 ------KMIVKNVPFEATKKDIRDLFGAHGHLKSVRLP-KKFDARTRGFAFLDFVSRREA 428
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVD 423
AY L T LGR HL+ +E E ++D
Sbjct: 429 ENAYDALRHTHLLGR--HLVLEWAEEAEQDLD 458
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 122/347 (35%), Gaps = 95/347 (27%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ----- 393
I V+N+ Y T + + ++FE +G L+ V++P A+V F P+ A Q
Sbjct: 156 ILVKNIPYGTTVEQIREMFEPHGELSRVLVP------PAGTMAVVDFEKPDDAAQAFRAV 209
Query: 394 AYQHLDGTVF------LGRMLH-LIPGKPKENEGNVDGKVHCC--ISERKLDAFNQVVEA 444
AY+ L TV LG P P + G H I+E+++ E
Sbjct: 210 AYRRLGSTVVYLEKGPLGMFAEGSTPAAP-----STTGPSHAAIKIAEQQIPDPTAEGEE 264
Query: 445 RSKRI-----ILVKNLPYRTLPTDLKALF--EPFGDLGRVLVPP------------YGIT 485
+ I + +KN+ + T L +F P R+ P YG
Sbjct: 265 EEQSISGGTTLYLKNIAFSTTQERLTQVFCHLPAFSFARIQTKPDPKRPGSRLSMGYGFV 324
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG 545
G F A+ A S+ L++++A G KE KG +
Sbjct: 325 G---FKDAESARKALKSMQGFSLDGHALHVKFAGRGADEVEKEVVKGSKSTTT------- 374
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
T + +KN+ F +T+ IR F G
Sbjct: 375 -----------------------------------TKMIVKNVPFEATKKDIRDLFGAHG 399
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+ SV + +K D + + G+ F+ F +R A L+++ L
Sbjct: 400 HLKSVRLPKKFDAR------TRGFAFLDFVSRREAENAYDALRHTHL 440
>gi|366988651|ref|XP_003674093.1| hypothetical protein NCAS_0A11540 [Naumovozyma castellii CBS 4309]
gi|342299956|emb|CCC67712.1| hypothetical protein NCAS_0A11540 [Naumovozyma castellii CBS 4309]
Length = 869
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 240/513 (46%), Gaps = 97/513 (18%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I+++GR+F+RN+ YT TEDD KLF +G L EV + +D T K+KGFA + F P+
Sbjct: 321 EKISKTGRLFLRNILYTTTEDDFRKLFGPFGELEEVHVALDTRTGKSKGFAYILFKDPKE 380
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKE--------------------------------- 417
A QAY LD +F GR+LH++P K+
Sbjct: 381 AVQAYIELDKQIFQGRLLHILPADAKKSHRLDEFDLKNMPLKKQRELKKKDNASRQTFSW 440
Query: 418 -----NEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
N+ V G V + +K D +++ S + + L + D++ FE G
Sbjct: 441 NSLYMNQDAVLGSVAAKLGLKKSD----LIDPESSNSAVKQALAEAHIIGDVRKYFESKG 496
Query: 473 ---------------DLGRVLVP--PYGIT-------------------------GLVEF 490
D +LV PYG T +VE+
Sbjct: 497 VDLTKFAQTKSPEQRDAKVILVKNFPYGTTREEIGELFLPFGKLKRLLMPPSGTIAIVEY 556
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
++AF LA+ +FK+ +YLE P+ F E + E + EE E ++ K
Sbjct: 557 RDTTSGRSAFTKLAFKRFKDGIIYLEKGPKDCFTRDAEPADLIEADAPEENVVEVKDTVK 616
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
E D EE+ EDE P +++IKNLNF +T + + FK
Sbjct: 617 EIMDSTDKTSN----EEH--EDEHVADGPTVSIFIKNLNFTTTSVELSKRFKTFSGFVVA 670
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK + LSMG+GF +F T+E N + L + +D H+I+LK S+R S
Sbjct: 671 QVKTKPDPKHADKTLSMGFGFAEFRTKEQANAVISALDGTVIDGHRIQLKLSHRQGSSNT 730
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
T+ S+ K KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF
Sbjct: 731 TS----SAKGKKIKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGF 784
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
FVEF+ EA+ AM L Q HL GRRLV+++
Sbjct: 785 AFVEFLLPKEAENAMDQL-QGVHLLGRRLVMQY 816
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
Query: 29 ITQEQLKAKFEEK-----------GTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDY 77
+T + LK FE++ +TDV++ EG+ R+FAFIGYH E+ A A++Y
Sbjct: 13 LTDDNLKQHFEKRLNQTHKNEPINSLITDVKILRNREGESRKFAFIGYHNEEDAFDAVNY 72
Query: 78 FNNTYVFSSRIKVEKCSNLGDTTKPK 103
FN +Y+ +++++V + D P+
Sbjct: 73 FNGSYINTAKLEVSMAKSFADPRVPQ 98
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 130/323 (40%), Gaps = 59/323 (18%)
Query: 215 SKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKN 270
+K+P +R I+VKN P G ++++ F LP ++ + +A + ++D +
Sbjct: 505 TKSP-EQRDAKVILVKNFPYGTTREEIGELF--LPFGKLKRLLMPPSGTIAIVEYRDTTS 561
Query: 271 CNKALNKNKSFWKGKQLNIY--KYSKDNSAKYSGAAD---------------DNNNASME 313
A K +F + K IY K KD + + AD D M+
Sbjct: 562 GRSAFTK-LAFKRFKDGIIYLEKGPKDCFTRDAEPADLIEADAPEENVVEVKDTVKEIMD 620
Query: 314 NIKAKHWKSQEDSVQFAEDIAE--SGRIFVRNLSYTVTEDDLTKLFEKYGP--LAEV-IL 368
+ + ED E +A+ + IF++NL++T T +L+K F+ + +A+V
Sbjct: 621 STDKTSNEEHED-----EHVADGPTVSIFIKNLNFTTTSVELSKRFKTFSGFVVAQVKTK 675
Query: 369 PIDKETDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKV 426
P K DKT GF F E A LDGTV G H I K +G+ +
Sbjct: 676 PDPKHADKTLSMGFGFAEFRTKEQANAVISALDGTVIDG---HRIQLKLSHRQGSSNTTS 732
Query: 427 HCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------ 480
I+VKNLP+ D+ LF FG L V VP
Sbjct: 733 SAKGK------------KIKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKS 780
Query: 481 PYGITGLVEFLQKNQAKAAFNSL 503
G VEFL +A+ A + L
Sbjct: 781 ARGF-AFVEFLLPKEAENAMDQL 802
>gi|363752183|ref|XP_003646308.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889943|gb|AET39491.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
Length = 855
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 210/370 (56%), Gaps = 24/370 (6%)
Query: 419 EGNVDGKVHCCISERKLD--AFNQVVEA--RSKRIILVKNLPYRTLPTDLKALFEPFGDL 474
E +V G V R +D AF + A R RIILVKN P+ T +L LF PFG L
Sbjct: 467 EAHVIGDVRKYFELRGVDLTAFQKYKNAFDRDDRIILVKNFPHGTTREELAELFLPFGKL 526
Query: 475 GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE 534
R+L+PP G +V++ A+AAF+ L+Y +FKE LYLE P+ F S+ E
Sbjct: 527 LRLLMPPSGTIAIVQYRDVPSARAAFSKLSYKRFKEGILYLEKGPKNCF------SRNAE 580
Query: 535 KEKNEEEG-EEGEEEKKENTAEEDNQQGVPEVEENVEED--EEREPEPDTTLYIKNLNFN 591
++ E+G E EE+ KE A D+ E E D + + P T++++KNLNF+
Sbjct: 581 GDELVEDGTTEPEEKFKEAKATVDDVMAANRNETLNEHDDLDTQVHGPTTSIFVKNLNFS 640
Query: 592 STEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
+ + + FK + K DPK G+ SMG+GFV+F T+E N + L+ +
Sbjct: 641 TKTEDLTDKFKSFAGFIVAQIKTKPDPKRKGKTQSMGFGFVEFRTKEQANAVISALEGTV 700
Query: 652 LDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGE 711
+D H+I+LK S+R + A+T K N+ KI+V+N+PF+A + ++ ELF +FG+
Sbjct: 701 IDGHKIQLKLSHR--QGTASTAKTSKKNI----NGKIIVKNLPFEATRKDIFELFSSFGQ 754
Query: 712 LKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNV 770
LK VR+PKK S RGF FVEF+ EA+ AM L + HL GRRLV+++AE E+++
Sbjct: 755 LKSVRVPKKFDKSA--RGFAFVEFLLPKEAENAMDQL-EGVHLLGRRLVMQYAEQESEDA 811
Query: 771 E-DIRKRTNR 779
E I K TNR
Sbjct: 812 ELQIEKMTNR 821
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 272 NKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMEN------------IKAKH 319
N LNK+ + + + ++ + K+ + D AS+ + I+ K
Sbjct: 236 NTQLNKDDNLAQDEGVSDLDWLKNRRVRIRDGEDQAAQASISSEVPGVPVQQQSEIEEKQ 295
Query: 320 WKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKG 379
D Q I SGR+F+RN+ YT EDD +LF YG + E+ + +D T ++KG
Sbjct: 296 VPPISDEEQCLSKIRASGRLFLRNILYTAKEDDFQQLFAPYGEIEEIHIAVDTRTGQSKG 355
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
FA V F P+ A AY LD +F GR+LH++P PK++
Sbjct: 356 FAYVLFKNPDDAVNAYIELDKQIFQGRLLHILPADPKKS 394
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 42/199 (21%)
Query: 226 TIVVKNLPAGVKKKDLKAYFK-------------PLPLASVRTTFLGMAYIGFKDEKNCN 272
+I VKNL K +DL FK P P +T +G ++ F+ ++ N
Sbjct: 631 SIFVKNLNFSTKTEDLTDKFKSFAGFIVAQIKTKPDPKRKGKTQSMGFGFVEFRTKEQAN 690
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+ S +G ++ +K S + A+ S +NI
Sbjct: 691 AVI----SALEGTVIDGHKIQLKLSHRQGTAS--TAKTSKKNI----------------- 727
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
+G+I V+NL + T D+ +LF +G L V +P K+ DK+ +GFA V FL+P+ A
Sbjct: 728 ---NGKIIVKNLPFEATRKDIFELFSSFGQLKSVRVP--KKFDKSARGFAFVEFLLPKEA 782
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A L+G LGR L +
Sbjct: 783 ENAMDQLEGVHLLGRRLVM 801
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 129/338 (38%), Gaps = 71/338 (21%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKALNK 277
R I+VKN P G +++L F LP + + +A + ++D + A +K
Sbjct: 497 RDDRIILVKNFPHGTTREELAELF--LPFGKLLRLLMPPSGTIAIVQYRDVPSARAAFSK 554
Query: 278 NKSFWKGKQLNIY-----KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA-- 330
S+ + K+ +Y K +A+ +D E K K K+ D V A
Sbjct: 555 -LSYKRFKEGILYLEKGPKNCFSRNAEGDELVEDGTTEPEE--KFKEAKATVDDVMAANR 611
Query: 331 -------EDI-----AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKE 373
+D+ + IFV+NL+++ +DLT F+ + + P K
Sbjct: 612 NETLNEHDDLDTQVHGPTTSIFVKNLNFSTKTEDLTDKFKSFAGFIVAQIKTKPDPKRKG 671
Query: 374 TDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-------IPGKPKENEGNVDGKV 426
++ GF V F E A L+GTV G + L K ++ N++GK
Sbjct: 672 KTQSMGFGFVEFRTKEQANAVISALEGTVIDGHKIQLKLSHRQGTASTAKTSKKNINGK- 730
Query: 427 HCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------ 480
I+VKNLP+ D+ LF FG L V VP
Sbjct: 731 -----------------------IIVKNLPFEATRKDIFELFSSFGQLKSVRVPKKFDKS 767
Query: 481 PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
G VEFL +A+ A + L L +++A
Sbjct: 768 ARGF-AFVEFLLPKEAENAMDQLEGVHLLGRRLVMQYA 804
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TDV+L +G+ RRFAF+G+ E A A++YF+ +++ + +++V + D P
Sbjct: 37 ITDVKLMKNKDGESRRFAFVGFKFESDAFDAVEYFDGSFIDTCKLEVSMAKSFADPRVPV 96
Query: 104 SWSKYAPDSSAYQKLHNIAPK--QDLKPEHTKDSKPG 138
+ + A ++L K Q+ + +H K++KPG
Sbjct: 97 PMREKRRE--ALKRLREREDKLLQENQRKHRKETKPG 131
>gi|213403304|ref|XP_002172424.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212000471|gb|EEB06131.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 804
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 129/329 (39%), Positives = 190/329 (57%), Gaps = 25/329 (7%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS +IL KN PY T +L +F FG+LGRVL+PP G ++EFL A+ AF LA
Sbjct: 467 RSDSVILAKNFPYGTTAEELAEMFGEFGELGRVLIPPAGTIAIIEFLNTPDARQAFAKLA 526
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + K LYLE AP+ VF A K GK + + +G E +
Sbjct: 527 YKRIKGSVLYLEKAPKNVFNTAVAKKAGKPEVVQKIDGISTENK--------------AA 572
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
V+E V E + E +TL++KN++F++++ +R F S + R K K PGQ
Sbjct: 573 VDEAVTEPADGET---STLFVKNISFSTSQTDFQRIFASLNGFLSAVI-RAKPSKRPGQL 628
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
+SMG+GFV+F ++E A+ +Q LD H++E+K S++ ++ A T RK+
Sbjct: 629 MSMGFGFVEFRSKEDAVTAMNAMQGFLLDGHKLEIKLSHKGADAAAET--RKADEKRHVK 686
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
G+KIL++N+PF+A + +V LF A+G+L+ VR+PKK + RGF F EF+T EA+ A
Sbjct: 687 GTKILIKNLPFEATKKDVVSLFGAYGQLRSVRVPKKFDRTA--RGFAFAEFVTAREAENA 744
Query: 745 MKALCQSTHLYGRRLVLEWAEEA--DNVE 771
MKAL + THL GR LVL++A A D++E
Sbjct: 745 MKAL-KHTHLLGRHLVLQYASTAGLDDME 772
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 63/88 (71%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I+ES R+F+RNL+Y+ EDD+ +LF+ YG L +V +P+DK+T+ KGFA V F +
Sbjct: 281 EQISESKRLFLRNLTYSCQEDDIVELFQDYGALEQVHVPVDKKTNAPKGFAYVEFKNKDD 340
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A +AYQ LDG F GR+LH++P K + N
Sbjct: 341 AIRAYQDLDGLAFQGRLLHILPAKSRTN 368
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 130/318 (40%), Gaps = 40/318 (12%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKALNK- 277
+R I+ KN P G ++L F L V G +A I F + + +A K
Sbjct: 466 QRSDSVILAKNFPYGTTAEELAEMFGEFGELGRVLIPPAGTIAIIEFLNTPDARQAFAKL 525
Query: 278 NKSFWKGKQLNIYKYSKD--NSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
KG L + K K+ N+A A ++ I ++ + +++V D E
Sbjct: 526 AYKRIKGSVLYLEKAPKNVFNTAVAKKAGKPEVVQKIDGISTENKAAVDEAVTEPAD-GE 584
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVIL--PIDKETD-KTKGFALVTFLMPEHA 391
+ +FV+N+S++ ++ D ++F G L+ VI P + + GF V F E A
Sbjct: 585 TSTLFVKNISFSTSQTDFQRIFASLNGFLSAVIRAKPSKRPGQLMSMGFGFVEFRSKEDA 644
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR--- 448
A + G + G K+ +S + DA + +A KR
Sbjct: 645 VTAMNAMQGFLLDGH------------------KLEIKLSHKGADAAAETRKADEKRHVK 686
Query: 449 --IILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAF 500
IL+KNLP+ D+ +LF +G L V VP G EF+ +A+ A
Sbjct: 687 GTKILIKNLPFEATKKDVVSLFGAYGQLRSVRVPKKFDRTARGF-AFAEFVTAREAENAM 745
Query: 501 NSLAYTKFKEVPLYLEWA 518
+L +T L L++A
Sbjct: 746 KALKHTHLLGRHLVLQYA 763
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 31 QEQLKAKFEEK----GTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
+E++K F + G +TDV+L +G RRFAF+G+ + AQ A+ +FN T+V +S
Sbjct: 15 EEKIKQHFTSQSGYNGEITDVKLAKLRDGTSRRFAFLGFKNSEDAQDAVKFFNKTFVCTS 74
Query: 87 RIKVE 91
++ V+
Sbjct: 75 KLDVQ 79
Score = 39.3 bits (90), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLP--KKMVGSGLHRGFGFVEFITKNEAKRA 744
++ +RN+ + ++ ++ ELF+ +G L+ V +P KK + +GF +VEF K++A RA
Sbjct: 288 RLFLRNLTYSCQEDDIVELFQDYGALEQVHVPVDKK---TNAPKGFAYVEFKNKDDAIRA 344
Query: 745 MKALCQSTHLYGRRLVLEWAEEADNV 770
+ L GR L + A+ N+
Sbjct: 345 YQDL-DGLAFQGRLLHILPAKSRTNI 369
>gi|406865361|gb|EKD18403.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 820
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 196/360 (54%), Gaps = 51/360 (14%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF + + R ILVKN PY T +L+ +FEPFG + RVL+PP G +VEF +
Sbjct: 465 LDAFKR--QERGDTAILVKNFPYGTSLEELRKMFEPFGQVLRVLMPPIGTIAIVEFSEPT 522
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVF-----------AEAKEKSKGKEKEKNEEEGE 543
+A+AAF SLAY K ++ L+LE AP+ +F A++ GKEK + E
Sbjct: 523 KARAAFASLAYRKVQDSVLFLEKAPKNLFKNPSSNAVVVPADSMATKSGKEKLSASDLLE 582
Query: 544 EGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK 603
+ E E +TL+++NLNF +T D + FK
Sbjct: 583 K-----------------------------ESETLDTSTLFVRNLNFTTTSDRLTEAFKP 613
Query: 604 CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN 663
S V K DP+ PGQ LSMG+GF++F ++ AL + L++H++ +K S+
Sbjct: 614 LDGFISARVKTKTDPRKPGQVLSMGFGFLEFRSKAQAQAALTAMNGYVLEDHKLLIKASH 673
Query: 664 RNLESEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM 721
+ ++ A +RK N K G +KI+++N+PFQA + +V LF AFGEL+ VR+PKK
Sbjct: 674 KGVD--AAEERRKEDNAKKHAGKRTKIIIKNLPFQATKQDVRGLFGAFGELRSVRVPKKF 731
Query: 722 VGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA--EEADNVEDIRKRTNR 779
S RGF F FIT EA+ A++AL + THL GRRLVLE+A + D E+I K R
Sbjct: 732 DHS--TRGFAFANFITAREAENALEAL-KDTHLLGRRLVLEFAADDAVDAEEEIAKMEKR 788
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 317 AKHWKSQEDSVQF---AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE 373
A+ K +ED + E I +GR+F RNL+Y+ +EDDL + F +G L EV LP+D +
Sbjct: 272 AEQQKDEEDKEELDPTIEAIKATGRLFARNLAYSASEDDLREHFAPFGSLEEVHLPVDAK 331
Query: 374 TDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
+KG+ V + P A +A+ LDG F GR+LH++P K +
Sbjct: 332 -GTSKGYVYVQYSDPSAAAEAFHALDGEPFQGRLLHILPASAKRD 375
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 132/332 (39%), Gaps = 64/332 (19%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPL---------PLASV-----------RTTFLG 259
+R I+VKN P G ++L+ F+P P+ ++ R F
Sbjct: 471 QERGDTAILVKNFPYGTSLEELRKMFEPFGQVLRVLMPPIGTIAIVEFSEPTKARAAFAS 530
Query: 260 MAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKH 319
+AY +D + F + N++K N+ AD SM K
Sbjct: 531 LAYRKVQD----------SVLFLEKAPKNLFKNPSSNAVVVP--AD-----SMATKSGKE 573
Query: 320 WKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP-IDKETDKTK 378
S D ++ + ++ +FVRNL++T T D LT+ F+ PL I + +TD K
Sbjct: 574 KLSASDLLEKESETLDTSTLFVRNLNFTTTSDRLTEAFK---PLDGFISARVKTKTDPRK 630
Query: 379 -------GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCIS 431
GF + F A A ++G V L + K + VD
Sbjct: 631 PGQVLSMGFGFLEFRSKAQAQAALTAMNGYVLEDHKLLI-----KASHKGVD----AAEE 681
Query: 432 ERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP---PYGITG-- 486
RK D + R+K I++KNLP++ D++ LF FG+L V VP + G
Sbjct: 682 RRKEDNAKKHAGKRTK--IIIKNLPFQATKQDVRGLFGAFGELRSVRVPKKFDHSTRGFA 739
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
F+ +A+ A +L T L LE+A
Sbjct: 740 FANFITAREAENALEALKDTHLLGRRLVLEFA 771
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+ + K F T+TD +L RR ++GY ++A A+ YFN T++ S+I
Sbjct: 15 ITENEFKKHFGAIATITDAKLISN-----RRIGYVGYKSPEEAAKAVKYFNRTFIRMSKI 69
Query: 89 KVEKCSNLGDTTKPKS 104
VE + DTT P S
Sbjct: 70 GVEIARPIADTTLPPS 85
>gi|397643662|gb|EJK76002.1| hypothetical protein THAOC_02254 [Thalassiosira oceanica]
Length = 869
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 145/353 (41%), Positives = 202/353 (57%), Gaps = 35/353 (9%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFG-DL-GRVLVPPYGITGLVEFLQKNQAKAAFNS 502
RSK +ILVKNLPY TL DL +F G D+ R+L+PP LVE+ A+ AF
Sbjct: 513 RSKTMILVKNLPYDTLLEDLTKVFHGIGGDVPQRILLPPSKSAALVEYGHAVDARRAFRR 572
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
L+Y KFK VPLYLEWAP E ++S + E +E ++ K T N++
Sbjct: 573 LSYKKFKHVPLYLEWAP---MDEEFDRSVS-----GQSETQESRDDPKRQTHLSANERNQ 624
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG--PIASVTVARKKDPK- 619
P V+E+ D + +Y+KNLNF ++E +R F + G P A V + K P
Sbjct: 625 P-VDEDPANDAA-DVGTSQAIYVKNLNFATSEVQLRDAFSQAGLEPRA-VKIPTKAAPSR 681
Query: 620 ---------SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
S + LSMG+GFV+F + + +A+K +Q +D H +E+K S ++L S
Sbjct: 682 RNASDGGEGSEVRQLSMGFGFVEFSSEDEALKAIKKMQGKLVDGHSLEIKLSTKSL-SGG 740
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
+ + A++T KI+VRN+PF+A +SE+ +LF +FG+LK VRLPKK G HRGF
Sbjct: 741 NSRAPEVDKSARKT--KIMVRNVPFEATRSELLQLFGSFGQLKKVRLPKKF--DGTHRGF 796
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE----EADNVEDIRKRTNR 779
F EF+T EA+ AM +L Q THLYGRRLVLEWAE E + +D R+R R
Sbjct: 797 AFCEFVTSKEARNAMTSLSQ-THLYGRRLVLEWAEHCGGENEKADDARERAKR 848
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+FVRNL +T TE++L + F +G + V +P+D + + KG+A V F + A A +
Sbjct: 324 RLFVRNLPFTTTEEELHETFSHFGQINSVHIPVD-DAKRNKGYAFVEFESKKDAKIAMES 382
Query: 398 LDGTVFLGRMLHLIPGKP 415
+DG F GR++H++P KP
Sbjct: 383 MDGEDFQGRLIHIMPAKP 400
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 127/334 (38%), Gaps = 52/334 (15%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKALN 276
KR I+VKNLP +DL F + + L A + + + +A
Sbjct: 512 KRSKTMILVKNLPYDTLLEDLTKVFHGIGGDVPQRILLPPSKSAALVEYGHAVDARRAFR 571
Query: 277 KNKSFWKGKQLNIY----------KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDS 326
+ S+ K K + +Y S ++ + DD + + ++ ED
Sbjct: 572 R-LSYKKFKHVPLYLEWAPMDEEFDRSVSGQSETQESRDDPKRQTHLSANERNQPVDEDP 630
Query: 327 VQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYG--PLAEVILPIDKETDK-------- 376
A D+ S I+V+NL++ +E L F + G P A V +P +
Sbjct: 631 ANDAADVGTSQAIYVKNLNFATSEVQLRDAFSQAGLEPRA-VKIPTKAAPSRRNASDGGE 689
Query: 377 -------TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCC 429
+ GF V F + A +A + + G + G L + + GN
Sbjct: 690 GSEVRQLSMGFGFVEFSSEDEALKAIKKMQGKLVDGHSLEIKLSTKSLSGGNSRAP---- 745
Query: 430 ISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-----PYGI 484
+V ++ K I+V+N+P+ ++L LF FG L +V +P +
Sbjct: 746 ----------EVDKSARKTKIMVRNVPFEATRSELLQLFGSFGQLKKVRLPKKFDGTHRG 795
Query: 485 TGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
EF+ +A+ A SL+ T L LEWA
Sbjct: 796 FAFCEFVTSKEARNAMTSLSQTHLYGRRLVLEWA 829
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TD ++ T +G+ R+ AF+G+ QA A+ YF+ ++ ++R+ V T P
Sbjct: 42 ITDCRILKTKDGRSRKIAFVGFRSPSQADLAVAYFDRSFAGTARLSVSLA--FSKKTGPS 99
Query: 104 S-----WSKYAPDSSAYQKLHNIAPKQDLKPEHTKD 134
+ WSK++ SS Y KLHN PK + + + +D
Sbjct: 100 ASDYRPWSKHSVGSSRYAKLHN-QPKDEPEKDEAED 134
>gi|401623161|gb|EJS41268.1| mrd1p [Saccharomyces arboricola H-6]
Length = 886
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 165/526 (31%), Positives = 254/526 (48%), Gaps = 109/526 (20%)
Query: 325 DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVT 384
D Q E I ++GR+F+RN+ YT E+D +LF +G L EV + +D T ++KGFA V
Sbjct: 333 DEEQAIEKINKTGRLFLRNILYTSKEEDFKELFSSFGELEEVHVALDTRTGQSKGFAYVL 392
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE--------------------------- 417
F P++A +AY LD +F GR+LH++PG+ K+
Sbjct: 393 FKDPKNAVEAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNMPLKKQKELKRKAAAS 452
Query: 418 -----------NEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKA 466
N+ V G V + K +Q+++A + + + L + D++
Sbjct: 453 KQTFSWNSLYMNQDAVLGSVAAKLGLAK----SQLIDAENSSSAVKQALAEAHVIGDVRK 508
Query: 467 LFEPFG-DLGR--------------VLVP--PYGIT----------------------GL 487
FE G DL + +LV P+G T G
Sbjct: 509 YFESKGVDLAKFSQLKSPSQRDDRVILVKNFPFGTTREELGEMFVPYGKLERLLMPPAGT 568
Query: 488 VEFLQ---KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEE 544
+ +Q A+AAF L+Y +FK+ +YLE P+ F K N ++ +
Sbjct: 569 IAIIQFRDTTSARAAFTKLSYKRFKDGIIYLEKGPKDCFT----------KPANSDDLID 618
Query: 545 GEEEKKENTAE-EDNQQGVPEVEENVEED------EEREPEPDTTLYIKNLNFNSTEDSI 597
K+E E + + + EV N E+ E+ P +++IKNLNF++T +
Sbjct: 619 DSSAKEEKPVEIKPSLNDLMEVNNNSNEESTATQGEDVADGPTVSIFIKNLNFSTTNQDL 678
Query: 598 RRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQI 657
FK V K DPK G+ LSMG+GFV+F T+E N + + + +D H+I
Sbjct: 679 SDRFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVISAMDGTVIDGHKI 738
Query: 658 ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
+LK S+R S+ + K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+
Sbjct: 739 QLKLSHRQA-SQNNSTKTKSN---KRSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRV 793
Query: 718 PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
PKK S RGF FVEF+ EA+ AM L HL GRRLV+++
Sbjct: 794 PKKFDKSA--RGFAFVEFLLPKEAENAMDQL-HGVHLLGRRLVMQY 836
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 137/326 (42%), Gaps = 65/326 (19%)
Query: 216 KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKD 267
K+P +R I+VKN P G +++L F P +P A +A I F+D
Sbjct: 524 KSP-SQRDDRVILVKNFPFGTTREELGEMFVPYGKLERLLMPPAGT------IAIIQFRD 576
Query: 268 EKNCNKALNKNKSFWKGKQLNIY--KYSKDNSAKYSGAAD--DNNNASMEN--------- 314
+ A K S+ + K IY K KD K + + D D+++A E
Sbjct: 577 TTSARAAFTK-LSYKRFKDGIIYLEKGPKDCFTKPANSDDLIDDSSAKEEKPVEIKPSLN 635
Query: 315 --IKAKHWKSQEDSVQFAEDIAE--SGRIFVRNLSYTVTEDDLTKLFEKYGP--LAEV-I 367
++ + ++E + ED+A+ + IF++NL+++ T DL+ F+ + +A+V
Sbjct: 636 DLMEVNNNSNEESTATQGEDVADGPTVSIFIKNLNFSTTNQDLSDRFKVFTGFVVAQVKT 695
Query: 368 LPIDKETDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGK 425
P K KT GF V F E A +DGTV G K
Sbjct: 696 KPDPKHQGKTLSMGFGFVEFRTKEQANAVISAMDGTVIDGH------------------K 737
Query: 426 VHCCISERKLDAFNQVVEARSKRI--ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP--- 480
+ +S R+ N +KR I+VKNLP+ D+ LF FG L V VP
Sbjct: 738 IQLKLSHRQASQNNSTKTKSNKRSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKF 797
Query: 481 ---PYGITGLVEFLQKNQAKAAFNSL 503
G VEFL +A+ A + L
Sbjct: 798 DKSARGF-AFVEFLLPKEAENAMDQL 822
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 41/197 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFK-------------PLPLASVRTTFLGMAYIGFKDEKNCN 272
+I +KNL +DL FK P P +T +G ++ F+ ++ N
Sbjct: 663 SIFIKNLNFSTTNQDLSDRFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQAN 722
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+ S G ++ +K +K H ++ +++ +
Sbjct: 723 AVI----SAMDGTVIDGHKIQ---------------------LKLSHRQASQNNSTKTKS 757
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
SG+I V+NL + T D+ +LF +G L V +P K+ DK+ +GFA V FL+P+ A
Sbjct: 758 NKRSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVP--KKFDKSARGFAFVEFLLPKEA 815
Query: 392 TQAYQHLDGTVFLGRML 408
A L G LGR L
Sbjct: 816 ENAMDQLHGVHLLGRRL 832
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TDV++ G+ RRF FIGY E+ A A+DYFN ++V +S+I+V + D P+
Sbjct: 43 ITDVKILRDRNGESRRFGFIGYRNEEDAFDAVDYFNGSFVNTSKIEVSMAKSFADPRVPQ 102
>gi|226504376|ref|NP_001146285.1| uncharacterized protein LOC100279860 [Zea mays]
gi|219886507|gb|ACL53628.1| unknown [Zea mays]
gi|413919482|gb|AFW59414.1| hypothetical protein ZEAMMB73_904714 [Zea mays]
Length = 881
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 202/344 (58%), Gaps = 36/344 (10%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS +ILVKNLP+ + +L LF+ G L ++++PP + LV F++ +A+ AF L
Sbjct: 535 RSNYVILVKNLPFNSTEEELATLFQKHGSLDKIILPPTRVFALVVFVEATEAQYAFKKLL 594
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
YT++K+ PLYLEWAPE + + + EE + E E + N
Sbjct: 595 YTRYKDTPLYLEWAPENILSPT-----------SAPVDEEVKNEVGERILTKAN------ 637
Query: 565 VEENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKKD 617
+++ VE E +PD ++++KNLNF +T++S+++HF K G + S TV KK
Sbjct: 638 IDQTVEGVSAEEIDPDRVESRSVFVKNLNFKTTDESLKQHFSTKLKSGSLKSATV--KKH 695
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
K G+ +SMG+GFV+F + E+ K LQ + LD H + L+ + + +A
Sbjct: 696 VKK-GKNVSMGFGFVEFDSVETATGVCKDLQGTVLDGHALILQLCHVKKDGQAA-----K 749
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
N ++ +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVE++T
Sbjct: 750 KNGKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEYVT 806
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
K EA+ A++AL STHLYGR LV+E A+E + +E++R+RT F
Sbjct: 807 KQEAQNALQALA-STHLYGRHLVIERAKEGETLEELRERTAAQF 849
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 33/205 (16%)
Query: 31 QEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKV 90
+ +L+ F KG VTD ++ T +GK R+FAFIGY ++A AL YFNNTY+ + +I
Sbjct: 16 ERRLRDVFSRKGEVTDAKVIRTKDGKSRQFAFIGYRTNEEADEALKYFNNTYIDTCKITC 75
Query: 91 EKCSNLGDTTKPKSWSKYAPDSSAY-QKLHNIAPKQDLKP-----EHTKDSKPGKKSK-- 142
E +GD P+ WS+++ S Y K N A D P + T G K
Sbjct: 76 EVARKIGDPDAPRPWSRHSLKKSEYGSKDKNNAGAVDAPPKGSNAQGTSAHASGSKGSVA 135
Query: 143 NDPTFSDFLQ---------LHGKDVSKLL----------------PLSNKDGEEKEEENE 177
NDP F +FL+ + D + L PL N E + +E
Sbjct: 136 NDPKFLEFLEAMQPRSKAKMWANDTAATLDTAAKDSVVAAKESKGPLKNVLTSENDSSSE 195
Query: 178 DESNNQIAHADISDMEYLKLKTKSK 202
D S+ ++A+ S+ +LKT++K
Sbjct: 196 DTSDEKVANDLSSENASEQLKTENK 220
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFE---KYGPL--AEVILPIDKETDKTKGFALVTFL 386
D ES +FV+NL++ T++ L + F K G L A V + K + + GF V F
Sbjct: 653 DRVESRSVFVKNLNFKTTDESLKQHFSTKLKSGSLKSATVKKHVKKGKNVSMGFGFVEFD 712
Query: 387 MPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARS 446
E AT + L GTV G L L C ++ A + + +S
Sbjct: 713 SVETATGVCKDLQGTVLDGHALIL----------------QLCHVKKDGQAAKKNGKDKS 756
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT---GLVEFLQKNQAKAAFNS 502
+LV+N+ + DL+ LF PFG + + +P +G VE++ K +A+ A +
Sbjct: 757 STKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTKQEAQNALQA 816
Query: 503 LAYTKFKEVPLYLEWAPEG-VFAEAKEKSKGK 533
LA T L +E A EG E +E++ +
Sbjct: 817 LASTHLYGRHLVIERAKEGETLEELRERTAAQ 848
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E+GR+++ NL Y +EDDL +L +YG + + + ++K T + G V F +P+ A +A
Sbjct: 343 ETGRLYICNLPYATSEDDLVELCRQYGDVEQAHIVVNKATKISTGRGYVLFSLPDSAVRA 402
Query: 395 YQHLDGTVFLGRMLHLIPGKP 415
LD + F GR+L + KP
Sbjct: 403 LDELDNSSFQGRVLRVKAAKP 423
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 136/353 (38%), Gaps = 89/353 (25%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+NL + TE++L LF+K+G L ++ILP T+ FALV F+ A A++ L
Sbjct: 540 ILVKNLPFNSTEEELATLFQKHGSLDKIILP------PTRVFALVVFVEATEAQYAFKKL 593
Query: 399 DGTVFLGRMLHLIPGKPKE----NEGNVDGKVHCCISERKLDAFN--QVVEARS------ 446
T + L+L P+ VD +V + ER L N Q VE S
Sbjct: 594 LYTRYKDTPLYL-EWAPENILSPTSAPVDEEVKNEVGERILTKANIDQTVEGVSAEEIDP 652
Query: 447 ----KRIILVKNLPYRTLPTDLKALFEP---FGDLGRVLVPPY---------GITGLVEF 490
R + VKNL ++T LK F G L V + G G VEF
Sbjct: 653 DRVESRSVFVKNLNFKTTDESLKQHFSTKLKSGSLKSATVKKHVKKGKNVSMGF-GFVEF 711
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
A L T L L+ +A +K+ GK+K
Sbjct: 712 DSVETATGVCKDLQGTVLDGHALILQLCHVKKDGQAAKKN-GKDK--------------- 755
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
T L ++N+ F +TE +R+ F G I S+
Sbjct: 756 ----------------------------SSTKLLVRNVAFEATEKDLRQLFSPFGQIKSL 787
Query: 611 TVARKKDPKSPGQFLS-MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS 662
+ P +F S G+ FV++ T++ AL+ L ++ L + ++R+
Sbjct: 788 RL--------PMKFGSHRGFAFVEYVTKQEAQNALQALASTHLYGRHLVIERA 832
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 16/89 (17%)
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
K++ ILV+N+PF + + E+ LF+ G L + LP V F V F+ EA
Sbjct: 534 KRSNYVILVKNLPFNSTEEELATLFQKHGSLDKIILPPTRV-------FALVVFVEATEA 586
Query: 742 KRAMKALCQSTHLYGRR----LVLEWAEE 766
+ A K L LY R L LEWA E
Sbjct: 587 QYAFKKL-----LYTRYKDTPLYLEWAPE 610
>gi|302676924|ref|XP_003028145.1| hypothetical protein SCHCODRAFT_60180 [Schizophyllum commune H4-8]
gi|300101833|gb|EFI93242.1| hypothetical protein SCHCODRAFT_60180 [Schizophyllum commune H4-8]
Length = 743
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 185/341 (54%), Gaps = 40/341 (11%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS ILVKN+PY T + LFEP G L RV+VPP G +V+F A+ AF ++A
Sbjct: 414 RSDTAILVKNIPYGTSEAQIHELFEPSGALSRVIVPPAGTIAIVDFENPADAQKAFRAVA 473
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + +YLE P G+F +G +A +D+
Sbjct: 474 YRRLGNSVVYLEKGPAGIF--------------------DGAPAPAPTSAAQDS------ 507
Query: 565 VEENVEEDEEREP--EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPG 622
ED E EP TTL++KNL+F ++ + + + F A V K DPK G
Sbjct: 508 ------EDGEDEPALAAGTTLFVKNLSFATSAERLTQIFGGLPGFAYARVQTKPDPKRAG 561
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK 682
LSMGYGFV F T ++ ALK + LD H +++K + R E + T RK + AK
Sbjct: 562 GRLSMGYGFVGFKTADAAKSALKGMAGFVLDGHTLQVKFAGRGAEEDDVT--RKGAKSAK 619
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
T +K++V+N+PF+A + ++ ELF A G+LK VRLP+K RGF F++F+T+ EA+
Sbjct: 620 STTTKMIVKNVPFEATKKDIRELFGAHGQLKSVRLPRKF--DARARGFAFLDFVTRQEAE 677
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEAD-NVEDIRKRTNRYFG 782
AM AL + THL GR LVLEWAEE + ++E +RK+ FG
Sbjct: 678 NAMAAL-RHTHLLGRHLVLEWAEEGEQDIEALRKKAGVGFG 717
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 58/81 (71%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I ++ R+FVRNL+++ T DDLT+LF G L++V +P+D T ++KG A VTF+ PE A
Sbjct: 231 IKQTSRLFVRNLAFSCTTDDLTELFSPLGALSQVHIPVDAMTKQSKGMAYVTFVNPEDAV 290
Query: 393 QAYQHLDGTVFLGRMLHLIPG 413
+AYQ LD F GR+LHL+P
Sbjct: 291 KAYQMLDKKSFQGRILHLLPA 311
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 61/309 (19%)
Query: 29 ITQEQLKAKFEEKG----TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
+T ++L+ FE+KG +TDV++ +G RRF F+GY E +AQAA +YF+ T++
Sbjct: 13 VTPDRLRKHFEQKGAPHGVLTDVKVAMKQDGTSRRFGFVGYKTEQEAQAAKEYFHKTFID 72
Query: 85 SSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKND 144
++RI V+ + + +P+ K + Q+ PK+D+K KD+K KKSK
Sbjct: 73 ATRIFVDAVEGIQE--RPRKRRKLDGEEQVAQE----PPKKDVK--KGKDAKESKKSKQ- 123
Query: 145 PTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHA-----------DISDME 193
++L+L +K + DG+E + + A SD++
Sbjct: 124 --LDEYLELTRPRAAKGPAWA--DGQEAPQPAAPVAPGTPAEEEEAMEEDPKDEGASDLD 179
Query: 194 YLKLK-TKSKDTA-----------------------PSDPSVPPVSKAPVHKRQYHTIVV 229
+LK +K DTA P+D + PP +Q + V
Sbjct: 180 WLKKHMSKDVDTAGRAFEQSDDEEDAQQKSSLQSNEPNDYAEPPEDPTIASIKQTSRLFV 239
Query: 230 KNLPAGVKKKDLKAYFKPL--------PLASVRTTFLGMAYIGFKDEKNCNKALNK-NKS 280
+NL DL F PL P+ ++ GMAY+ F + ++ KA +K
Sbjct: 240 RNLAFSCTTDDLTELFSPLGALSQVHIPVDAMTKQSKGMAYVTFVNPEDAVKAYQMLDKK 299
Query: 281 FWKGKQLNI 289
++G+ L++
Sbjct: 300 SFQGRILHL 308
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 125/318 (39%), Gaps = 46/318 (14%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKALNKN 278
+R I+VKN+P G + + F+P L+ V G +A + F++ + KA
Sbjct: 413 QRSDTAILVKNIPYGTSEAQIHELFEPSGALSRVIVPPAGTIAIVDFENPADAQKAFRAV 472
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED---IAE 335
G ++ K + + GA ++ ++ ED ED +A
Sbjct: 473 AYRRLGN--SVVYLEKGPAGIFDGAPAPAPTSAAQD--------SED----GEDEPALAA 518
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEH 390
+FV+NLS+ + + LT++F A + + + + G+ V F +
Sbjct: 519 GTTLFVKNLSFATSAERLTQIFGGLPGFAYARVQTKPDPKRAGGRLSMGYGFVGFKTADA 578
Query: 391 ATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A A + + G V G L + G+ E + S +
Sbjct: 579 AKSALKGMAGFVLDGHTLQVKFAGRGAEEDDVTRKGAKSAKS--------------TTTK 624
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSL 503
++VKN+P+ D++ LF G L V +P G ++F+ + +A+ A +L
Sbjct: 625 MIVKNVPFEATKKDIRELFGAHGQLKSVRLPRKFDARARGF-AFLDFVTRQEAENAMAAL 683
Query: 504 AYTKFKEVPLYLEWAPEG 521
+T L LEWA EG
Sbjct: 684 RHTHLLGRHLVLEWAEEG 701
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 40/213 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
T+ VKNL + L F LP A V+T +G ++GFK
Sbjct: 521 TLFVKNLSFATSAERLTQIFGGLPGFAYARVQTKPDPKRAGGRLSMGYGFVGFKTADAAK 580
Query: 273 KALNKNKSF-WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE 331
AL F G L + K++G A +++ K KS + +
Sbjct: 581 SALKGMAGFVLDGHTLQV---------KFAG-----RGAEEDDVTRKGAKSAKST----- 621
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
+ ++ V+N+ + T+ D+ +LF +G L V LP K + +GFA + F+ + A
Sbjct: 622 ----TTKMIVKNVPFEATKKDIRELFGAHGQLKSVRLP-RKFDARARGFAFLDFVTRQEA 676
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDG 424
A L T LGR HL+ +E E +++
Sbjct: 677 ENAMAALRHTHLLGR--HLVLEWAEEGEQDIEA 707
>gi|326930082|ref|XP_003211181.1| PREDICTED: probable RNA-binding protein 19-like [Meleagris
gallopavo]
Length = 746
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/203 (54%), Positives = 141/203 (69%), Gaps = 3/203 (1%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P TL+IKNLNF +TED+++ F K G + S T+++KK+ G LSMG+GFV++ E
Sbjct: 516 PGCTLFIKNLNFTTTEDTLKETFSKVGAVKSCTISKKKN--KAGTLLSMGFGFVEYKKPE 573
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL+ LQ +D H++E+K S R + A RK V KQ SKILVRNIPFQA
Sbjct: 574 GAQKALRQLQGCIVDGHKLEVKISERAVRP-AVKSSRKKQTVKKQKTSKILVRNIPFQAT 632
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
E+ ELF FGELK VRLPKKM G+G HRGFGFV+F+TK +AK+A ALC STHLYGRR
Sbjct: 633 VREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAFNALCHSTHLYGRR 692
Query: 759 LVLEWAEEADNVEDIRKRTNRYF 781
LVLEWA+ + VE +R+RT +F
Sbjct: 693 LVLEWADTEETVEALRRRTADHF 715
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 108/214 (50%), Gaps = 44/214 (20%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++ + F GT+TD LK+T +GKFR+F FIGY ED+AQAAL +FN +++ +SR+
Sbjct: 1 MKEDRFRKLFAAFGTLTDCCLKFTKDGKFRKFGFIGYKSEDEAQAALSHFNRSFIDTSRV 60
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQK-----LHNIAPKQDLKPEHTKD-SKPGKKSK 142
VE C + GD +KPK+WSK++ A ++ + AP K + K+ S+ K+ +
Sbjct: 61 TVELCKSFGDPSKPKAWSKHSQRVPALEEQPEKPVTIAAPASTKKDKKKKNPSENFKELE 120
Query: 143 NDPTFSDFLQLHGKDVS----------------KLLPLSN----------------KDGE 170
D TF +FL +H K K P+++ KDG
Sbjct: 121 EDKTFQEFLVVHQKRSQVATWANDTLVEEPKKEKSKPVADYLNFDSDESEDLSEEEKDGS 180
Query: 171 EKEEENED------ESNNQIAHADISDMEYLKLK 198
E E+ E+ + D+SDM+YLK K
Sbjct: 181 ESPEDEEETKAKKQQEKKAATREDLSDMDYLKSK 214
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
GPL+E+ PID+ T K KGFA +T+++PEHA +AY +DG VF GRM+HL+P
Sbjct: 335 GPLSEIHFPIDRLTKKPKGFAFITYMIPEHAVKAYAEMDGQVFQGRMMHLLP 386
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 90/191 (47%), Gaps = 23/191 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT---KGFALVTFLMPEHATQAY 395
+F++NL++T TED L + F K G + + K T GF V + PE A +A
Sbjct: 520 LFIKNLNFTTTEDTLKETFSKVGAVKSCTISKKKNKAGTLLSMGFGFVEYKKPEGAQKAL 579
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ L G + G L + K +E V V S RK + ++ ILV+N+
Sbjct: 580 RQLQGCIVDGHKLEV-----KISERAVRPAVK---SSRKKQTVKKQKTSK----ILVRNI 627
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAY-TK 507
P++ +++ LF FG+L V +P + G V+FL K AK AFN+L + T
Sbjct: 628 PFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAFNALCHSTH 687
Query: 508 FKEVPLYLEWA 518
L LEWA
Sbjct: 688 LYGRRLVLEWA 698
>gi|395326326|gb|EJF58737.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 831
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 185/334 (55%), Gaps = 22/334 (6%)
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
ARS RIILVKN+PY T D++ALFEP G+L RVLVPP G +VEF+ ++ + AF ++
Sbjct: 452 ARSDRIILVKNIPYGTSAADVRALFEPHGELRRVLVPPAGTLAVVEFVNPDEGRKAFRAV 511
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
AY + +YLE PEG+F +E + E +
Sbjct: 512 AYRRMGNSVIYLEKGPEGMFI-------------TDEPIADNESAAPAVPVSATGAAPIA 558
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
+E +E TTL++KNL+F++T + + + + A + K DP PG
Sbjct: 559 VADETSAANES-ALSAGTTLFVKNLSFSTTPEKLTQVVRHLPDFAFARIQTKPDPARPGA 617
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
LSMGYGFV F T + + LK + LD H++ +K + R +E E+T K K K
Sbjct: 618 RLSMGYGFVGFRTLDGARRGLKSMDGMVLDGHKLVVKWAGRGVEGESTADKEK----VKA 673
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+K++V+N+PF+ + ++ ELF A +LK VRLP+K RGF F+EF T++EA++
Sbjct: 674 RTTKMIVKNVPFEVTKKDIRELFGAHAQLKSVRLPRKF--DHRTRGFAFLEFTTRHEAEQ 731
Query: 744 AMKALCQSTHLYGRRLVLEWAEEAD-NVEDIRKR 776
A L + THL GR LVLEWAEE D +V+ +R +
Sbjct: 732 AYATL-RHTHLLGRHLVLEWAEEGDVDVDKLRDK 764
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 62/93 (66%), Gaps = 5/93 (5%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I ++ R+F+RNL +T TED++ + F+ +G + + L +D +T ++KG A VTF PE A
Sbjct: 263 ILQTSRLFLRNLPFTCTEDEIREHFQAHGDVTQAHLVLDPKTQQSKGLAYVTFAKPEQAV 322
Query: 393 QAYQHLDGTVFLGRMLHLIP-----GKPKENEG 420
AY+ LD T F GR+LH++P GK ++++G
Sbjct: 323 AAYEALDKTSFQGRLLHVLPAVDRKGKVEDDKG 355
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 135/337 (40%), Gaps = 38/337 (11%)
Query: 203 DTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-M 260
D + DPS P + P R I+VKN+P G D++A F+P L V G +
Sbjct: 438 DLSALDPS--PSGRRPA--RSDRIILVKNIPYGTSAADVRALFEPHGELRRVLVPPAGTL 493
Query: 261 AYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNAS-----MENI 315
A + F + KA G + + + DN +A+
Sbjct: 494 AVVEFVNPDEGRKAFRAVAYRRMGNSVIYLEKGPEGMFITDEPIADNESAAPAVPVSATG 553
Query: 316 KAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PI 370
A + E S ++ +FV+NLS++ T + LT++ A + P
Sbjct: 554 AAPIAVADETSAANESALSAGTTLFVKNLSFSTTPEKLTQVVRHLPDFAFARIQTKPDPA 613
Query: 371 DKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCC 429
+ G+ V F + A + + +DG V G L + G+ E E D
Sbjct: 614 RPGARLSMGYGFVGFRTLDGARRGLKSMDGMVLDGHKLVVKWAGRGVEGESTAD------ 667
Query: 430 ISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP---PYGITG 486
+ V+AR+ ++I VKN+P+ D++ LF L V +P + G
Sbjct: 668 ---------KEKVKARTTKMI-VKNVPFEVTKKDIRELFGAHAQLKSVRLPRKFDHRTRG 717
Query: 487 --LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEG 521
+EF +++A+ A+ +L +T L LEWA EG
Sbjct: 718 FAFLEFTTRHEAEQAYATLRHTHLLGRHLVLEWAEEG 754
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 29 ITQEQLKAKFEEK----GTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
+TQE+L+ FE GT+TDV+L +G RRF FIGY +A+ A +FN ++V
Sbjct: 13 LTQERLRKHFETSDGPGGTLTDVKLVLKPDGTSRRFGFIGYKSPREAERAKKWFNRSFVD 72
Query: 85 SSRIKVEKCSNLGDTTKPK 103
SSRI V+ D P+
Sbjct: 73 SSRITVDVVDGAKDAPAPR 91
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 42/212 (19%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
T+ VKNL + L + LP A ++T +G ++GF+
Sbjct: 576 TLFVKNLSFSTTPEKLTQVVRHLPDFAFARIQTKPDPARPGARLSMGYGFVGFRTLDGAR 635
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSG-AADDNNNASMENIKAKHWKSQEDSVQFAE 331
+ L G L+ +K K++G + + A E +KA+
Sbjct: 636 RGLKS----MDGMVLDGHKLV----VKWAGRGVEGESTADKEKVKAR------------- 674
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
+ ++ V+N+ + VT+ D+ +LF + L V LP K +T+GFA + F A
Sbjct: 675 ----TTKMIVKNVPFEVTKKDIRELFGAHAQLKSVRLP-RKFDHRTRGFAFLEFTTRHEA 729
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVD 423
QAY L T LGR HL+ +E + +VD
Sbjct: 730 EQAYATLRHTHLLGR--HLVLEWAEEGDVDVD 759
>gi|407925474|gb|EKG18485.1| hypothetical protein MPH_04287 [Macrophomina phaseolina MS6]
Length = 836
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 263/556 (47%), Gaps = 88/556 (15%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCNK 273
RQ + ++NLP V + DL+ YF +PL + + G AY+ F++ + +
Sbjct: 305 RQTGRLFLRNLPYDVSEDDLRDYFNSFGTLEEVHVPLDAKTGSGKGFAYVLFEESNDAVR 364
Query: 274 AL-NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
A + + ++G+ L+I + AK DD ++ + K + + Q A
Sbjct: 365 AYEDLDGRIFQGRLLHIIPAA----AKRENKLDD---FAISKLPIKQQRRIQQKAQAATS 417
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYG-PLAEVILPIDKETDKTKGFALVTFLMPEHA 391
F N Y + ++ + ++ G +EV+ P + + A +
Sbjct: 418 T------FNWNSLYMNADAVISSVADRLGVSKSEVLDPTSSDAAVKQAHAETHII---QE 468
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
T+AY +G VD LDAF Q +AR IL
Sbjct: 469 TKAYFSQNG---------------------VD-----------LDAFKQ--KARGDTAIL 494
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEV 511
VKN Y T P +LK +FE G + R L+PP G +VEF Q QA+AAF SLAY K K+
Sbjct: 495 VKNFSYGTKPDELKKMFEEHGTVTRFLMPPSGTIAIVEFAQAPQARAAFASLAYRKIKDS 554
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEED--NQQGVPEVEENV 569
L+LE AP+ +F E EG K A D ++ PE +
Sbjct: 555 ILFLEKAPKDLFKEGFTPHAIPTAAAPTAEG-------KAKLAASDLLAKEASPEQFDT- 606
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
+TLY++NLNF +T + F+ S V K DPK PGQ LSMG+
Sbjct: 607 -----------STLYVRNLNFATTSQRLTEVFRPLDGFVSARVKTKTDPKKPGQVLSMGF 655
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTG--SK 687
GF++F T+E AL + +LD +++ +K SN+ L +A +RK K G +K
Sbjct: 656 GFLEFRTKEQAQAALAAMDGYNLDGYKLMIKASNKGL--DAAEERRKEDKAKKAAGRQTK 713
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
++++N+PF+A + ++ LF A+G+L+ VR+PKK S RGF F +F T EA+ AM A
Sbjct: 714 VIIKNLPFEATKKDIRALFGAYGQLRSVRVPKKFDASA--RGFAFADFTTPREAENAMDA 771
Query: 748 LCQSTHLYGRRLVLEW 763
L ++THL GR+LVL++
Sbjct: 772 L-RNTHLLGRKLVLDF 786
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I ++GR+F+RNL Y V+EDDL F +G L EV +P+D +T KGFA V F
Sbjct: 302 ESIRQTGRLFLRNLPYDVSEDDLRDYFNSFGTLEEVHVPLDAKTGSGKGFAYVLFEESND 361
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A +AY+ LDG +F GR+LH+IP K
Sbjct: 362 AVRAYEDLDGRIFQGRLLHIIPAAAK 387
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T + F ++ VTD +L RR ++GY + A+ A+ YFN T++ SRI
Sbjct: 15 LTDADFRKHFSQRDAVTDTKLL-----AHRRIGYVGYKTPEAAEKAVKYFNKTFIRMSRI 69
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSS 113
VE + + +P++ K AP ++
Sbjct: 70 GVELARPVDEAPQPRN-RKRAPTAA 93
>gi|151942889|gb|EDN61235.1| multiple RNA-binding domain containing protein [Saccharomyces
cerevisiae YJM789]
Length = 887
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 248/513 (48%), Gaps = 94/513 (18%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I ++GR+F+RN+ YT E+D KLF +G L EV + +D T ++KGFA V F P++
Sbjct: 339 EKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKN 398
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKE--------------------------------- 417
A AY LD +F GR+LH++PG+ K+
Sbjct: 399 AVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNMPLKKQKELKRKAAASRQTFSW 458
Query: 418 -----NEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
N+ V G V + K +Q+++A + + + L + D++ FE G
Sbjct: 459 NSLYMNQDAVLGSVAAKLGLEK----SQLIDAENSSSAVKQALAEAHVIGDVRKYFESKG 514
Query: 473 -DLGR--------------VLVP--PYGIT----------------------GLVEFLQK 493
DL + +LV P+G T G + +Q
Sbjct: 515 VDLTKFSQLKSTNQRDDKVILVKNFPFGTTREELGEMFLPYGKLERLLMPPAGTIAIVQF 574
Query: 494 NQAKAA---FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
+A F L+Y +FK+ +YLE P+ F + E +EE E +
Sbjct: 575 RDTTSARAAFTKLSYKRFKDGIIYLERGPKDCFTKPAEADDLINNTSAKEEENPVEVKPS 634
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
N E N+ V E N DE+ P +++IKNLNF++T ++ FK
Sbjct: 635 SNDLMEANKD-VTEGSSNA-HDEDVIDGPTVSIFIKNLNFSTTNQNLTDRFKVFTGFVVA 692
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK G+ LSMG+GFV+F T+E N + + + +D H+I+LK S+R S++
Sbjct: 693 QVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQA-SQS 751
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF
Sbjct: 752 GNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGF 805
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
FVEF+ EA+ AM L HL GRRLV+++
Sbjct: 806 AFVEFLLPKEAENAMDQL-HGVHLLGRRLVMQY 837
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 131/319 (41%), Gaps = 55/319 (17%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKA 274
++R I+VKN P G +++L F LP + + +A + F+D + A
Sbjct: 526 TNQRDDKVILVKNFPFGTTREELGEMF--LPYGKLERLLMPPAGTIAIVQFRDTTSARAA 583
Query: 275 LNKNKSFWKGKQLNIY--KYSKDNSAKYSGAAD--DNNNASMENIKAKHWKSQEDSVQFA 330
K S+ + K IY + KD K + A D +N +A E + S D ++
Sbjct: 584 FTK-LSYKRFKDGIIYLERGPKDCFTKPAEADDLINNTSAKEEENPVEVKPSSNDLMEAN 642
Query: 331 EDIAESGR--------------IFVRNLSYTVTEDDLTKLFEKYGP--LAEV-ILPIDKE 373
+D+ E IF++NL+++ T +LT F+ + +A+V P K
Sbjct: 643 KDVTEGSSNAHDEDVIDGPTVSIFIKNLNFSTTNQNLTDRFKVFTGFVVAQVKTKPDPKH 702
Query: 374 TDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCI 430
KT GF V F E A +DGTV G + L + + GN K +
Sbjct: 703 QGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQASQSGNTKTKSN--- 759
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGI 484
+S +II VKNLP+ D+ LF FG L V VP G
Sbjct: 760 -------------KKSGKII-VKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGF 805
Query: 485 TGLVEFLQKNQAKAAFNSL 503
VEFL +A+ A + L
Sbjct: 806 -AFVEFLLPKEAENAMDQL 823
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 41/197 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFK-------------PLPLASVRTTFLGMAYIGFKDEKNCN 272
+I +KNL ++L FK P P +T +G ++ F+ ++ N
Sbjct: 664 SIFIKNLNFSTTNQNLTDRFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQAN 723
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+ A G D + + K H ++ + +
Sbjct: 724 AVI----------------------AAMDGTVIDGHKIQL---KLSHRQASQSGNTKTKS 758
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
+SG+I V+NL + T D+ +LF +G L V +P K+ DK+ +GFA V FL+P+ A
Sbjct: 759 NKKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVP--KKFDKSARGFAFVEFLLPKEA 816
Query: 392 TQAYQHLDGTVFLGRML 408
A L G LGR L
Sbjct: 817 ENAMDQLHGVHLLGRRL 833
>gi|207340299|gb|EDZ68693.1| YPR112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269058|gb|EEU04395.1| Mrd1p [Saccharomyces cerevisiae JAY291]
Length = 887
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 248/513 (48%), Gaps = 94/513 (18%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I ++GR+F+RN+ YT E+D KLF +G L EV + +D T ++KGFA V F P++
Sbjct: 339 EKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKN 398
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKE--------------------------------- 417
A AY LD +F GR+LH++PG+ K+
Sbjct: 399 AVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNMPLKKQKELKRKAAASRQTFSW 458
Query: 418 -----NEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
N+ V G V + K +Q+++A + + + L + D++ FE G
Sbjct: 459 NSLYMNQDAVLGSVAAKLGLEK----SQLIDAENSSSAVKQALAEAHVIGDVRKYFESKG 514
Query: 473 -DLGR--------------VLVP--PYGIT----------------------GLVEFLQK 493
DL + +LV P+G T G + +Q
Sbjct: 515 VDLTKFSQLKSTNQRDDKVILVKNFPFGTTREELGEMFLPYGKLERLLMPPAGTIAIVQF 574
Query: 494 NQAKAA---FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
+A F L+Y +FK+ +YLE P+ F + E +EE E +
Sbjct: 575 RDTTSARAAFTKLSYKRFKDGIIYLEKGPKDCFTKPAEADDLINNTSAKEEENPVEIKPS 634
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
N E N+ V E N DE+ P +++IKNLNF++T ++ FK
Sbjct: 635 SNDLMEANKD-VTEGSSNA-HDEDVIDGPTVSIFIKNLNFSTTNQNLTDKFKVFTGFVVA 692
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK G+ LSMG+GFV+F T+E N + + + +D H+I+LK S+R S++
Sbjct: 693 QVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQA-SQS 751
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF
Sbjct: 752 GNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGF 805
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
FVEF+ EA+ AM L HL GRRLV+++
Sbjct: 806 AFVEFLLPKEAENAMDQL-HGVHLLGRRLVMQY 837
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 131/319 (41%), Gaps = 55/319 (17%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKA 274
++R I+VKN P G +++L F LP + + +A + F+D + A
Sbjct: 526 TNQRDDKVILVKNFPFGTTREELGEMF--LPYGKLERLLMPPAGTIAIVQFRDTTSARAA 583
Query: 275 LNKNKSFWKGKQLNIY--KYSKDNSAKYSGAAD--DNNNASMENIKAKHWKSQEDSVQFA 330
K S+ + K IY K KD K + A D +N +A E + S D ++
Sbjct: 584 FTK-LSYKRFKDGIIYLEKGPKDCFTKPAEADDLINNTSAKEEENPVEIKPSSNDLMEAN 642
Query: 331 EDIAESGR--------------IFVRNLSYTVTEDDLTKLFEKYGP--LAEV-ILPIDKE 373
+D+ E IF++NL+++ T +LT F+ + +A+V P K
Sbjct: 643 KDVTEGSSNAHDEDVIDGPTVSIFIKNLNFSTTNQNLTDKFKVFTGFVVAQVKTKPDPKH 702
Query: 374 TDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCI 430
KT GF V F E A +DGTV G + L + + GN K +
Sbjct: 703 QGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQASQSGNTKTKSN--- 759
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGI 484
+S +II VKNLP+ D+ LF FG L V VP G
Sbjct: 760 -------------KKSGKII-VKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGF 805
Query: 485 TGLVEFLQKNQAKAAFNSL 503
VEFL +A+ A + L
Sbjct: 806 -AFVEFLLPKEAENAMDQL 823
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 41/197 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFK-------------PLPLASVRTTFLGMAYIGFKDEKNCN 272
+I +KNL ++L FK P P +T +G ++ F+ ++ N
Sbjct: 664 SIFIKNLNFSTTNQNLTDKFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQAN 723
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+ A G D + + K H ++ + +
Sbjct: 724 AVI----------------------AAMDGTVIDGHKIQL---KLSHRQASQSGNTKTKS 758
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
+SG+I V+NL + T D+ +LF +G L V +P K+ DK+ +GFA V FL+P+ A
Sbjct: 759 NKKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVP--KKFDKSARGFAFVEFLLPKEA 816
Query: 392 TQAYQHLDGTVFLGRML 408
A L G LGR L
Sbjct: 817 ENAMDQLHGVHLLGRRL 833
>gi|224000233|ref|XP_002289789.1| potential RNA bindin g protein [Thalassiosira pseudonana CCMP1335]
gi|220974997|gb|EED93326.1| potential RNA bindin g protein [Thalassiosira pseudonana CCMP1335]
Length = 886
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 136/341 (39%), Positives = 188/341 (55%), Gaps = 36/341 (10%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLG--RVLVPPYGITGLVEFLQKNQAKAAFNS 502
RS ILVKNLPY T +L F G R+L+PP LVE+ A+ AF
Sbjct: 528 RSATTILVKNLPYDTSLEELTKAFHSIGGDAPRRILLPPSKTAALVEYDHATDARRAFRR 587
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
LAY KFK VPLYLEWAP +A +K K + E + + E NT ++D
Sbjct: 588 LAYKKFKHVPLYLEWAP---MMDAVKK-KDEAVENGTSDNVQMECNNDHNTVKKDLMDAD 643
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA-SVTVARKKDP--- 618
+ T+Y+KNLNFN++ED ++R F G + +V + K P
Sbjct: 644 DHNADADNT---------QTIYVKNLNFNTSEDELKRQFTSVGFVPRAVKIPTKAAPMKK 694
Query: 619 KSPG-----QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL---KRSNRNLESEA 670
+SP + +SMGYGFV+F + E +A+K LQ +D H +++ +S + +S A
Sbjct: 695 QSPADDSETKLVSMGYGFVEFVSEEEAKKAMKSLQGKLVDGHSLDIKLSNKSLSSSKSSA 754
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
T+ + S N +KI++RNIPF+A +SE+ +LF FG+LK VRLPKK G HRGF
Sbjct: 755 PTIDKASKN------TKIMIRNIPFEATRSEILQLFGTFGQLKKVRLPKKF--DGTHRGF 806
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVE 771
GF EF+T+ EA+ AM L + THLYGR LVLEWA + V+
Sbjct: 807 GFCEFLTRKEAQNAMATLSR-THLYGRHLVLEWASNEETVD 846
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I + R+FVRNL +T TE++L + F ++G +A V +P+D +T + KG+A +++ A
Sbjct: 327 ITLADRLFVRNLPFTTTEEELFETFSQFGSVAAVHIPVD-DTKRNKGYAFISYQSKHDAK 385
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDG 424
A +DG F GR++H++P +P NE + DG
Sbjct: 386 LAIDTMDGEDFQGRLIHILPARP-SNEPDADG 416
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 136/332 (40%), Gaps = 53/332 (15%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKALN 276
KR TI+VKNLP ++L F + + R L A + + + +A
Sbjct: 527 KRSATTILVKNLPYDTSLEELTKAFHSIGGDAPRRILLPPSKTAALVEYDHATDARRAFR 586
Query: 277 KNKSFWKGKQLNIY--------KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQ 328
+ ++ K K + +Y K + A +G +D N ME H ++D +
Sbjct: 587 R-LAYKKFKHVPLYLEWAPMMDAVKKKDEAVENGTSD---NVQME-CNNDHNTVKKDLMD 641
Query: 329 FAEDIAE---SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVI------LPIDKET----D 375
+ A+ + I+V+NL++ +ED+L + F G + + P+ K++
Sbjct: 642 ADDHNADADNTQTIYVKNLNFNTSEDELKRQFTSVGFVPRAVKIPTKAAPMKKQSPADDS 701
Query: 376 KTK----GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCIS 431
+TK G+ V F+ E A +A + L G + G L + +
Sbjct: 702 ETKLVSMGYGFVEFVSEEEAKKAMKSLQGKLVDGHSLDIKLSNKSLSSSKSSAPT----- 756
Query: 432 ERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-----PYGITG 486
+ +A I+++N+P+ +++ LF FG L +V +P + G
Sbjct: 757 ---------IDKASKNTKIMIRNIPFEATRSEILQLFGTFGQLKKVRLPKKFDGTHRGFG 807
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
EFL + +A+ A +L+ T L LEWA
Sbjct: 808 FCEFLTRKEAQNAMATLSRTHLYGRHLVLEWA 839
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQAYQ 396
+I +RN+ + T ++ +LF +G L +V LP K+ D T +GF FL + A A
Sbjct: 765 KIMIRNIPFEATRSEILQLFGTFGQLKKVRLP--KKFDGTHRGFGFCEFLTRKEAQNAMA 822
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERK 434
L T GR L L + NE VDGKV + K
Sbjct: 823 TLSRTHLYGRHLVL---EWASNEETVDGKVDVGMVREK 857
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGD----T 99
+TD +L T +G+ R+ AF+G+ + AQ + YF+ ++ +S++ V + + T
Sbjct: 43 LTDCKLLKTKDGRSRKIAFVGFKSPEMAQQTVSYFHKSFALTSKLNVSLAFSKKEGPPLT 102
Query: 100 TKPKSWSKYAPDSS 113
++ + WSK++ SS
Sbjct: 103 SEYRPWSKHSAGSS 116
>gi|190408039|gb|EDV11304.1| multiple RNA-binding domain-containing protein 1 [Saccharomyces
cerevisiae RM11-1a]
Length = 887
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 248/513 (48%), Gaps = 94/513 (18%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I ++GR+F+RN+ YT E+D KLF +G L EV + +D T ++KGFA V F P++
Sbjct: 339 EKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKN 398
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKE--------------------------------- 417
A AY LD +F GR+LH++PG+ K+
Sbjct: 399 AVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNMPLKKQKELKRKAAASRQTFSW 458
Query: 418 -----NEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
N+ V G V + K +Q+++A + + + L + D++ FE G
Sbjct: 459 NSLYMNQDAVLGSVAAKLGLEK----SQLIDAENSSSAVKQALAEAHVIGDVRKYFESKG 514
Query: 473 -DLGR--------------VLVP--PYGIT----------------------GLVEFLQK 493
DL + +LV P+G T G + +Q
Sbjct: 515 VDLTKFSQLKSTNQRDDKVILVKNFPFGTTREELGEMFLPYGKLERLLMPPAGTIAIVQF 574
Query: 494 NQAKAA---FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
+A F L+Y +FK+ +YLE P+ F + E +EE E +
Sbjct: 575 RDTTSARAAFTKLSYKRFKDGIIYLEKGPKDCFTKPAEADDLINNTSAKEEENPVEIKPS 634
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
N E N+ V E N DE+ P +++IKNLNF++T ++ FK
Sbjct: 635 SNDLMEANKD-VTEGSSNA-HDEDVIDGPTVSIFIKNLNFSTTNQNLTDKFKVFTGFVVA 692
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK G+ LSMG+GFV+F T+E N + + + +D H+I+LK S+R S++
Sbjct: 693 QVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQA-SQS 751
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF
Sbjct: 752 GNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGF 805
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
FVEF+ EA+ AM L HL GRRLV+++
Sbjct: 806 AFVEFLLPKEAENAMDQL-HGVHLLGRRLVMQY 837
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 131/319 (41%), Gaps = 55/319 (17%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKA 274
++R I+VKN P G +++L F LP + + +A + F+D + A
Sbjct: 526 TNQRDDKVILVKNFPFGTTREELGEMF--LPYGKLERLLMPPAGTIAIVQFRDTTSARAA 583
Query: 275 LNKNKSFWKGKQLNIY--KYSKDNSAKYSGAAD--DNNNASMENIKAKHWKSQEDSVQFA 330
K S+ + K IY K KD K + A D +N +A E + S D ++
Sbjct: 584 FTK-LSYKRFKDGIIYLEKGPKDCFTKPAEADDLINNTSAKEEENPVEIKPSSNDLMEAN 642
Query: 331 EDIAESGR--------------IFVRNLSYTVTEDDLTKLFEKYGP--LAEV-ILPIDKE 373
+D+ E IF++NL+++ T +LT F+ + +A+V P K
Sbjct: 643 KDVTEGSSNAHDEDVIDGPTVSIFIKNLNFSTTNQNLTDKFKVFTGFVVAQVKTKPDPKH 702
Query: 374 TDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCI 430
KT GF V F E A +DGTV G + L + + GN K +
Sbjct: 703 QGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQASQSGNTKTKSN--- 759
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGI 484
+S +II VKNLP+ D+ LF FG L V VP G
Sbjct: 760 -------------KKSGKII-VKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGF 805
Query: 485 TGLVEFLQKNQAKAAFNSL 503
VEFL +A+ A + L
Sbjct: 806 -AFVEFLLPKEAENAMDQL 823
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 41/197 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFK-------------PLPLASVRTTFLGMAYIGFKDEKNCN 272
+I +KNL ++L FK P P +T +G ++ F+ ++ N
Sbjct: 664 SIFIKNLNFSTTNQNLTDKFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQAN 723
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+ A G D + + K H ++ + +
Sbjct: 724 AVI----------------------AAMDGTVIDGHKIQL---KLSHRQASQSGNTKTKS 758
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
+SG+I V+NL + T D+ +LF +G L V +P K+ DK+ +GFA V FL+P+ A
Sbjct: 759 NKKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVP--KKFDKSARGFAFVEFLLPKEA 816
Query: 392 TQAYQHLDGTVFLGRML 408
A L G LGR L
Sbjct: 817 ENAMDQLHGVHLLGRRL 833
>gi|323350239|gb|EGA84386.1| Mrd1p [Saccharomyces cerevisiae VL3]
Length = 887
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 248/513 (48%), Gaps = 94/513 (18%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I ++GR+F+RN+ YT E+D KLF +G L EV + +D T ++KGFA V F P++
Sbjct: 339 EKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKN 398
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKE--------------------------------- 417
A AY LD +F GR+LH++PG+ K+
Sbjct: 399 AVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNMPLKKQKELKRKAAASRQTFSW 458
Query: 418 -----NEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
N+ V G V + K +Q+++A + + + L + D++ FE G
Sbjct: 459 NSLYMNQDAVLGSVAAKLGLEK----SQLIDAENSSSAVKQALAEAHVIGDVRKYFESKG 514
Query: 473 -DLGR--------------VLVP--PYGIT----------------------GLVEFLQK 493
DL + +LV P+G T G + +Q
Sbjct: 515 VDLTKFSQLKSTNQRDDKVILVKNFPFGTTREELGEMFLPYGKLERLLMPPAGTIAIVQF 574
Query: 494 NQAKAA---FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
+A F L+Y +FK+ +YLE P+ F + E +EE E +
Sbjct: 575 RDTTSARAAFTKLSYKRFKDGIIYLEKGPKDCFTKPAEADDLINNTSAKEEENPVEIKPS 634
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
N E N+ V E N DE+ P +++IKNLNF++T ++ FK
Sbjct: 635 SNDLMEANKD-VTEGSSNA-HDEDVIDGPTVSIFIKNLNFSTTNQNLTDKFKVFTGFVVA 692
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK G+ LSMG+GFV+F T+E N + + + +D H+I+LK S+R S++
Sbjct: 693 QVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQA-SQS 751
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF
Sbjct: 752 GNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGF 805
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
FVEF+ EA+ AM L HL GRRLV+++
Sbjct: 806 AFVEFLLPKEAENAMDQL-HGVHLLGRRLVMQY 837
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 131/319 (41%), Gaps = 55/319 (17%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKA 274
++R I+VKN P G +++L F LP + + +A + F+D + A
Sbjct: 526 TNQRDDKVILVKNFPFGTTREELGEMF--LPYGKLERLLMPPAGTIAIVQFRDTTSARAA 583
Query: 275 LNKNKSFWKGKQLNIY--KYSKDNSAKYSGAAD--DNNNASMENIKAKHWKSQEDSVQFA 330
K S+ + K IY K KD K + A D +N +A E + S D ++
Sbjct: 584 FTK-LSYKRFKDGIIYLEKGPKDCFTKPAEADDLINNTSAKEEENPVEIKPSSNDLMEAN 642
Query: 331 EDIAESGR--------------IFVRNLSYTVTEDDLTKLFEKYGP--LAEV-ILPIDKE 373
+D+ E IF++NL+++ T +LT F+ + +A+V P K
Sbjct: 643 KDVTEGSSNAHDEDVIDGPTVSIFIKNLNFSTTNQNLTDKFKVFTGFVVAQVKTKPDPKH 702
Query: 374 TDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCI 430
KT GF V F E A +DGTV G + L + + GN K +
Sbjct: 703 QGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQASQSGNTKTKSN--- 759
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGI 484
+S +II VKNLP+ D+ LF FG L V VP G
Sbjct: 760 -------------KKSGKII-VKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGF 805
Query: 485 TGLVEFLQKNQAKAAFNSL 503
VEFL +A+ A + L
Sbjct: 806 -AFVEFLLPKEAENAMDQL 823
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 41/197 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFK-------------PLPLASVRTTFLGMAYIGFKDEKNCN 272
+I +KNL ++L FK P P +T +G ++ F+ ++ N
Sbjct: 664 SIFIKNLNFSTTNQNLTDKFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQAN 723
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+ A G D + + K H ++ + +
Sbjct: 724 AVI----------------------AAMDGTVIDGHKIQL---KLSHRQASQSGNTKTKS 758
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
+SG+I V+NL + T D+ +LF +G L V +P K+ DK+ +GFA V FL+P+ A
Sbjct: 759 NKKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVP--KKFDKSARGFAFVEFLLPKEA 816
Query: 392 TQAYQHLDGTVFLGRML 408
A L G LGR L
Sbjct: 817 ENAMDQLHGVHLLGRRL 833
>gi|349581915|dbj|GAA27072.1| K7_Mrd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 887
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 246/513 (47%), Gaps = 94/513 (18%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I ++GR+F+RN+ YT E+D KLF +G L EV + +D T ++KGFA V F P++
Sbjct: 339 EKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKN 398
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKE--------------------------------- 417
A AY LD +F GR+LH++PG+ K+
Sbjct: 399 AVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNMPLKKQKELKRKAAASRQTFSW 458
Query: 418 -----NEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
N+ V G V + K +Q+++A + + + L + D++ FE G
Sbjct: 459 NSLYMNQDAVLGSVAAKLGLEK----SQLIDAENSSSAVKQALAEAHVIGDVRKYFESKG 514
Query: 473 -DLGR--------------VLVP--PYGIT----------------------GLVEFLQK 493
DL + +LV P+G T G + +Q
Sbjct: 515 VDLTKFSQLKSTNQRDDKVILVKNFPFGTTREELGEMFLPYGKLERLLMPPAGTIAIVQF 574
Query: 494 NQAKAA---FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
+A F L+Y +FK+ +YLE P+ F + E +EE E +
Sbjct: 575 RDTTSARAAFTKLSYKRFKDGIIYLEKGPKDCFTKPAEADDLINNTSAKEEENPVEIKPS 634
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
N E N+ V E N DE+ P +++IKNLNF++T ++ FK
Sbjct: 635 SNDLMEANKD-VTEGSSNA-HDEDVIDGPTVSIFIKNLNFSTTNQNLTDRFKVFTGFVVA 692
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK G+ LSMG+GFV+F T+E N + + + +D H+I+LK S+R
Sbjct: 693 QVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQASQNG 752
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
T K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF
Sbjct: 753 NT-KTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGF 805
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
FVEF+ EA+ AM L HL GRRLV+++
Sbjct: 806 AFVEFLLPKEAENAMDQL-HGVHLLGRRLVMQY 837
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 131/319 (41%), Gaps = 55/319 (17%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKA 274
++R I+VKN P G +++L F LP + + +A + F+D + A
Sbjct: 526 TNQRDDKVILVKNFPFGTTREELGEMF--LPYGKLERLLMPPAGTIAIVQFRDTTSARAA 583
Query: 275 LNKNKSFWKGKQLNIY--KYSKDNSAKYSGAAD--DNNNASMENIKAKHWKSQEDSVQFA 330
K S+ + K IY K KD K + A D +N +A E + S D ++
Sbjct: 584 FTK-LSYKRFKDGIIYLEKGPKDCFTKPAEADDLINNTSAKEEENPVEIKPSSNDLMEAN 642
Query: 331 EDIAESGR--------------IFVRNLSYTVTEDDLTKLFEKYGP--LAEV-ILPIDKE 373
+D+ E IF++NL+++ T +LT F+ + +A+V P K
Sbjct: 643 KDVTEGSSNAHDEDVIDGPTVSIFIKNLNFSTTNQNLTDRFKVFTGFVVAQVKTKPDPKH 702
Query: 374 TDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCI 430
KT GF V F E A +DGTV G + L + + GN K +
Sbjct: 703 QGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQASQNGNTKTKSN--- 759
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGI 484
+S +II VKNLP+ D+ LF FG L V VP G
Sbjct: 760 -------------KKSGKII-VKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGF 805
Query: 485 TGLVEFLQKNQAKAAFNSL 503
VEFL +A+ A + L
Sbjct: 806 -AFVEFLLPKEAENAMDQL 823
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 41/197 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFK-------------PLPLASVRTTFLGMAYIGFKDEKNCN 272
+I +KNL ++L FK P P +T +G ++ F+ ++ N
Sbjct: 664 SIFIKNLNFSTTNQNLTDRFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQAN 723
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+ A G D + + K H ++ ++ +
Sbjct: 724 AVI----------------------AAMDGTVIDGHKIQL---KLSHRQASQNGNTKTKS 758
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
+SG+I V+NL + T D+ +LF +G L V +P K+ DK+ +GFA V FL+P+ A
Sbjct: 759 NKKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVP--KKFDKSARGFAFVEFLLPKEA 816
Query: 392 TQAYQHLDGTVFLGRML 408
A L G LGR L
Sbjct: 817 ENAMDQLHGVHLLGRRL 833
>gi|254574096|ref|XP_002494157.1| Essential conserved protein that is part of the 90S preribosome
[Komagataella pastoris GS115]
gi|238033956|emb|CAY71978.1| Essential conserved protein that is part of the 90S preribosome
[Komagataella pastoris GS115]
Length = 810
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 163/516 (31%), Positives = 253/516 (49%), Gaps = 102/516 (19%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I+++GR+FVRN+SYT TE + +LF YG L EV + ID T +KGF V F PE A
Sbjct: 281 ISQTGRLFVRNISYTATEAEFRQLFSTYGELDEVHVAIDTRTGASKGFVYVKFQDPEQAL 340
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN-------------------EGNVDGK-------- 425
+AY+ LD +F GR+LH++P +PK++ + VD
Sbjct: 341 EAYKSLDKQIFQGRLLHILPAQPKKDHRLDEFDIKNLPLKKQRELKKKVDASKSVFSWNS 400
Query: 426 -------VHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG-DLGR- 476
V ++++ + ++++ ++ + + L + D++ FE G DL +
Sbjct: 401 LYMNNDAVLSSVADKLGISKTELIDPQNSSSAVKQALAEAHVIGDVRKYFESKGVDLTKF 460
Query: 477 ---------VLVP--PYG-----ITGLVEFLQKNQAKAAF----NSLAYTKFKEVP---- 512
+LV PYG IT L F Q + K ++A +F++ P
Sbjct: 461 DTKERDDKVILVKNFPYGTSLDEITDL--FAQYGELKRVLMPPAGTIAVVEFRDAPSGRS 518
Query: 513 --------------LYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDN 558
+YLE P G+F + + + E +EG+E K D
Sbjct: 519 AFTKLAYRRFKKSIIYLEKGPTGLFT----RDPNSNEAPDVAEKKEGKEVKATGGDLLDT 574
Query: 559 QQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
+ DE P P ++++KNL+F++T ++ FK TV K D
Sbjct: 575 DKS----------DEALTPSGPTVSVFVKNLSFSTTVQTLTDTFKPLEGFTVATVKTKPD 624
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
K+PG+ LSMG+GFV+F T+E A+ L LD H+++LK S+R +S K +S
Sbjct: 625 AKNPGKTLSMGFGFVEFRTKEQAELAISTLDGKPLDGHRLQLKLSHR--KSGTNEKKARS 682
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
S SKI+++N+PF+A + ++ ELF +FG LK R+PKK S RGF FVEF
Sbjct: 683 SKT-----SKIIIKNLPFEATRKDIVELFSSFGHLKSARVPKKFDSSA--RGFAFVEFSL 735
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEE-ADNVED 772
EA++AM L Q HL GRRLV+E+A++ A+N E+
Sbjct: 736 LKEAEQAMDQL-QGVHLLGRRLVMEYAQQDAENAEE 770
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+++LKA F ++G V+DV+L G+ RRFAFIGY + A+ A Y+N++++ ++RI
Sbjct: 14 TEDKLKAYFSKQGDVSDVKLMKNRFGESRRFAFIGYKNAEDAEKAASYYNDSFIDTARIS 73
Query: 90 VEKCSNLGDTTK 101
VE D+ +
Sbjct: 74 VELAVTFADSNR 85
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 88/223 (39%), Gaps = 56/223 (25%)
Query: 203 DTAPSD----PSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL---PLASVRT 255
DT SD PS P VS + VKNL + L FKPL +A+V+T
Sbjct: 573 DTDKSDEALTPSGPTVS-----------VFVKNLSFSTTVQTLTDTFKPLEGFTVATVKT 621
Query: 256 ----------TFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAAD 305
+G ++ F+ ++ A+ S GK L+ ++ S + SG +
Sbjct: 622 KPDAKNPGKTLSMGFGFVEFRTKEQAELAI----STLDGKPLDGHRLQLKLSHRKSGTNE 677
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
+S ++ +I ++NL + T D+ +LF +G L
Sbjct: 678 KKARSS-----------------------KTSKIIIKNLPFEATRKDIVELFSSFGHLKS 714
Query: 366 VILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRML 408
+P K +GFA V F + + A QA L G LGR L
Sbjct: 715 ARVP-KKFDSSARGFAFVEFSLLKEAEQAMDQLQGVHLLGRRL 756
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 125/328 (38%), Gaps = 46/328 (14%)
Query: 214 VSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNC 271
++K +R I+VKN P G ++ F L V G +A + F+D +
Sbjct: 457 LTKFDTKERDDKVILVKNFPYGTSLDEITDLFAQYGELKRVLMPPAGTIAVVEFRDAPSG 516
Query: 272 NKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE------- 324
A K ++ + K+ IY K + ++ D N+N + + + K K +
Sbjct: 517 RSAFTK-LAYRRFKKSIIY-LEKGPTGLFT--RDPNSNEAPDVAEKKEGKEVKATGGDLL 572
Query: 325 DSVQFAEDIAESG---RIFVRNLSYTVTEDDLTKLF---EKYGPLAEVILPIDKETDKT- 377
D+ + E + SG +FV+NLS++ T LT F E + P K KT
Sbjct: 573 DTDKSDEALTPSGPTVSVFVKNLSFSTTVQTLTDTFKPLEGFTVATVKTKPDAKNPGKTL 632
Query: 378 -KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
GF V F E A A LDG G L L +S RK
Sbjct: 633 SMGFGFVEFRTKEQAELAISTLDGKPLDGHRLQL------------------KLSHRKSG 674
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEF 490
+ + I++KNLP+ D+ LF FG L VP G VEF
Sbjct: 675 TNEKKARSSKTSKIIIKNLPFEATRKDIVELFSSFGHLKSARVPKKFDSSARGF-AFVEF 733
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+A+ A + L L +E+A
Sbjct: 734 SLLKEAEQAMDQLQGVHLLGRRLVMEYA 761
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 135/378 (35%), Gaps = 84/378 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N Y + D++T LF +YG L V++P A+V F A+ L
Sbjct: 470 ILVKNFPYGTSLDEITDLFAQYGELKRVLMP------PAGTIAVVEFRDAPSGRSAFTKL 523
Query: 399 DGTVFLGRMLHLIPG-------KPKENEG-----NVDGKVHCCISERKLDA--FNQVVEA 444
F +++L G P NE +GK LD ++ +
Sbjct: 524 AYRRFKKSIIYLEKGPTGLFTRDPNSNEAPDVAEKKEGKEVKATGGDLLDTDKSDEALTP 583
Query: 445 RSKRI-ILVKNLPYRTLPTDLKALFEPFGDLGRVLV--------PPYGIT---GLVEFLQ 492
+ + VKNL + T L F+P V P ++ G VEF
Sbjct: 584 SGPTVSVFVKNLSFSTTVQTLTDTFKPLEGFTVATVKTKPDAKNPGKTLSMGFGFVEFRT 643
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
K QA+ A ++L L L+ + + G EKK
Sbjct: 644 KEQAELAISTLDGKPLDGHRLQLKLSHR----------------------KSGTNEKKAR 681
Query: 553 TAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
+++ + + IKNL F +T I F G + S V
Sbjct: 682 SSKT------------------------SKIIIKNLPFEATRKDIVELFSSFGHLKSARV 717
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
+K D + G+ FV+F + QA+ LQ L ++ ++ + ++ E+
Sbjct: 718 PKKFDSSA------RGFAFVEFSLLKEAEQAMDQLQGVHLLGRRLVMEYAQQDAENAEEE 771
Query: 673 VKRKSSNVAKQTGSKILV 690
++R + V KQ S+ L
Sbjct: 772 IERMTKKVQKQVASRELA 789
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
+ QTG ++ VRNI + A ++E +LF +GEL V + +G +GF +V+F
Sbjct: 280 IISQTG-RLFVRNISYTATEAEFRQLFSTYGELDEVHVAID-TRTGASKGFVYVKFQDPE 337
Query: 740 EAKRAMKAL 748
+A A K+L
Sbjct: 338 QALEAYKSL 346
>gi|440636620|gb|ELR06539.1| hypothetical protein GMDG_02173 [Geomyces destructans 20631-21]
Length = 841
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 193/345 (55%), Gaps = 27/345 (7%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L+AF + R ILVKN Y T +++ +FE FG + RVL+PP G +VEF Q
Sbjct: 486 LNAFKK--RERGDTTILVKNFTYGTSIDEIRKMFEEFGSVIRVLMPPSGTIAIVEFAQAP 543
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
QA+AAF SLAY + K+ +YLE AP+ +F + E + N A
Sbjct: 544 QARAAFASLAYRRMKDSVIYLEKAPKDLFTQPANV----------------EIKNVTNDA 587
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ + V + + + + +TL+++NL+FN+T D + FK S V
Sbjct: 588 KSTSIDAKLSVSDLLGPESAQTGADTSTLFVRNLSFNTTSDRLTETFKPLDGFMSARVNT 647
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GF++F ++ ALKV+ SLD H + +K S+R + +A +
Sbjct: 648 KTDPKKPGQVLSMGFGFLEFRSKAQAQAALKVMDGHSLDGHNLTIKASHRGV--DAAEER 705
Query: 675 RKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
RK K G +KI+V+N+PF+A + ++ LF +G+L+ VR+PKK + RGF F
Sbjct: 706 RKEDRAKKLAGKRTKIIVKNLPFEASKKDIRTLFGTYGQLRSVRVPKKFDNTA--RGFAF 763
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE--ADNVEDIRK 775
EF+T EA+ A++AL + THL GRRLV+E+A E D E+I K
Sbjct: 764 AEFVTAREAENAIEAL-KDTHLLGRRLVIEFAAEDAVDAEEEIEK 807
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I ESGR+FVRNL YT TED+L FEKYG L E+ LP+D + +KGF LV + A
Sbjct: 311 IRESGRLFVRNLPYTATEDELRVHFEKYGALEEIHLPLDA-SGTSKGFVLVQYEDHAAAA 369
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN 418
+A+ ++DG F GR+LH++P K +
Sbjct: 370 EAFHNVDGEPFQGRLLHILPAAAKRD 395
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 307 NNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEV 366
N+A +I AK S + A+ A++ +FVRNLS+ T D LT+ F+ PL
Sbjct: 584 TNDAKSTSIDAKLSVSDLLGPESAQTGADTSTLFVRNLSFNTTSDRLTETFK---PLDGF 640
Query: 367 ILP-IDKETDKTK-------GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
+ ++ +TD K GF + F A A + +DG G L + K +
Sbjct: 641 MSARVNTKTDPKKPGQVLSMGFGFLEFRSKAQAQAALKVMDGHSLDGHNLTI-----KAS 695
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
VD RK D ++ R+K I+VKNLP+ D++ LF +G L V
Sbjct: 696 HRGVD----AAEERRKEDRAKKLAGKRTK--IIVKNLPFEASKKDIRTLFGTYGQLRSVR 749
Query: 479 VP------PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPE 520
VP G EF+ +A+ A +L T L +E+A E
Sbjct: 750 VPKKFDNTARGF-AFAEFVTAREAENAIEALKDTHLLGRRLVIEFAAE 796
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
I++E+ + F K +TD +L RR ++GY + AQ A+ YFN +++ S+I
Sbjct: 15 ISEEEFREHFSSKQPITDAKLI-----PHRRIGYVGYKTPEDAQKAVKYFNKSFIRMSKI 69
Query: 89 KVEKCSNLGDTTKPKS 104
VE + DTT P S
Sbjct: 70 GVEMARAISDTTLPPS 85
>gi|328354024|emb|CCA40421.1| Multiple RNA-binding domain-containing protein 1 [Komagataella
pastoris CBS 7435]
Length = 834
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 163/516 (31%), Positives = 253/516 (49%), Gaps = 102/516 (19%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I+++GR+FVRN+SYT TE + +LF YG L EV + ID T +KGF V F PE A
Sbjct: 305 ISQTGRLFVRNISYTATEAEFRQLFSTYGELDEVHVAIDTRTGASKGFVYVKFQDPEQAL 364
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN-------------------EGNVDGK-------- 425
+AY+ LD +F GR+LH++P +PK++ + VD
Sbjct: 365 EAYKSLDKQIFQGRLLHILPAQPKKDHRLDEFDIKNLPLKKQRELKKKVDASKSVFSWNS 424
Query: 426 -------VHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG-DLGR- 476
V ++++ + ++++ ++ + + L + D++ FE G DL +
Sbjct: 425 LYMNNDAVLSSVADKLGISKTELIDPQNSSSAVKQALAEAHVIGDVRKYFESKGVDLTKF 484
Query: 477 ---------VLVP--PYG-----ITGLVEFLQKNQAKAAF----NSLAYTKFKEVP---- 512
+LV PYG IT L F Q + K ++A +F++ P
Sbjct: 485 DTKERDDKVILVKNFPYGTSLDEITDL--FAQYGELKRVLMPPAGTIAVVEFRDAPSGRS 542
Query: 513 --------------LYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDN 558
+YLE P G+F + + + E +EG+E K D
Sbjct: 543 AFTKLAYRRFKKSIIYLEKGPTGLFT----RDPNSNEAPDVAEKKEGKEVKATGGDLLDT 598
Query: 559 QQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
+ DE P P ++++KNL+F++T ++ FK TV K D
Sbjct: 599 DKS----------DEALTPSGPTVSVFVKNLSFSTTVQTLTDTFKPLEGFTVATVKTKPD 648
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
K+PG+ LSMG+GFV+F T+E A+ L LD H+++LK S+R +S K +S
Sbjct: 649 AKNPGKTLSMGFGFVEFRTKEQAELAISTLDGKPLDGHRLQLKLSHR--KSGTNEKKARS 706
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
S SKI+++N+PF+A + ++ ELF +FG LK R+PKK S RGF FVEF
Sbjct: 707 SKT-----SKIIIKNLPFEATRKDIVELFSSFGHLKSARVPKKFDSSA--RGFAFVEFSL 759
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEE-ADNVED 772
EA++AM L Q HL GRRLV+E+A++ A+N E+
Sbjct: 760 LKEAEQAMDQL-QGVHLLGRRLVMEYAQQDAENAEE 794
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+++LKA F ++G V+DV+L G+ RRFAFIGY + A+ A Y+N++++ ++RI
Sbjct: 14 TEDKLKAYFSKQGDVSDVKLMKNRFGESRRFAFIGYKNAEDAEKAASYYNDSFIDTARIS 73
Query: 90 VEKCSNLGDTTKPKSW 105
VE D+ P S+
Sbjct: 74 VELAVTFADSNVPLSF 89
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 56/225 (24%)
Query: 203 DTAPSD----PSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL---PLASVRT 255
DT SD PS P VS + VKNL + L FKPL +A+V+T
Sbjct: 597 DTDKSDEALTPSGPTVS-----------VFVKNLSFSTTVQTLTDTFKPLEGFTVATVKT 645
Query: 256 ----------TFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAAD 305
+G ++ F+ ++ A+ S GK L+ ++ S + SG +
Sbjct: 646 KPDAKNPGKTLSMGFGFVEFRTKEQAELAI----STLDGKPLDGHRLQLKLSHRKSGTNE 701
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
+S ++ +I ++NL + T D+ +LF +G L
Sbjct: 702 KKARSS-----------------------KTSKIIIKNLPFEATRKDIVELFSSFGHLKS 738
Query: 366 VILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+P K +GFA V F + + A QA L G LGR L +
Sbjct: 739 ARVP-KKFDSSARGFAFVEFSLLKEAEQAMDQLQGVHLLGRRLVM 782
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 125/328 (38%), Gaps = 46/328 (14%)
Query: 214 VSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNC 271
++K +R I+VKN P G ++ F L V G +A + F+D +
Sbjct: 481 LTKFDTKERDDKVILVKNFPYGTSLDEITDLFAQYGELKRVLMPPAGTIAVVEFRDAPSG 540
Query: 272 NKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE------- 324
A K ++ + K+ IY K + ++ D N+N + + + K K +
Sbjct: 541 RSAFTK-LAYRRFKKSIIY-LEKGPTGLFT--RDPNSNEAPDVAEKKEGKEVKATGGDLL 596
Query: 325 DSVQFAEDIAESG---RIFVRNLSYTVTEDDLTKLF---EKYGPLAEVILPIDKETDKT- 377
D+ + E + SG +FV+NLS++ T LT F E + P K KT
Sbjct: 597 DTDKSDEALTPSGPTVSVFVKNLSFSTTVQTLTDTFKPLEGFTVATVKTKPDAKNPGKTL 656
Query: 378 -KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
GF V F E A A LDG G L L +S RK
Sbjct: 657 SMGFGFVEFRTKEQAELAISTLDGKPLDGHRLQL------------------KLSHRKSG 698
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEF 490
+ + I++KNLP+ D+ LF FG L VP G VEF
Sbjct: 699 TNEKKARSSKTSKIIIKNLPFEATRKDIVELFSSFGHLKSARVPKKFDSSARGF-AFVEF 757
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+A+ A + L L +E+A
Sbjct: 758 SLLKEAEQAMDQLQGVHLLGRRLVMEYA 785
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 135/378 (35%), Gaps = 84/378 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N Y + D++T LF +YG L V++P A+V F A+ L
Sbjct: 494 ILVKNFPYGTSLDEITDLFAQYGELKRVLMP------PAGTIAVVEFRDAPSGRSAFTKL 547
Query: 399 DGTVFLGRMLHLIPG-------KPKENEG-----NVDGKVHCCISERKLDA--FNQVVEA 444
F +++L G P NE +GK LD ++ +
Sbjct: 548 AYRRFKKSIIYLEKGPTGLFTRDPNSNEAPDVAEKKEGKEVKATGGDLLDTDKSDEALTP 607
Query: 445 RSKRI-ILVKNLPYRTLPTDLKALFEPFGDLGRVLV--------PPYGIT---GLVEFLQ 492
+ + VKNL + T L F+P V P ++ G VEF
Sbjct: 608 SGPTVSVFVKNLSFSTTVQTLTDTFKPLEGFTVATVKTKPDAKNPGKTLSMGFGFVEFRT 667
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
K QA+ A ++L L L+ + + G EKK
Sbjct: 668 KEQAELAISTLDGKPLDGHRLQLKLS----------------------HRKSGTNEKKAR 705
Query: 553 TAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
+++ + + IKNL F +T I F G + S V
Sbjct: 706 SSKT------------------------SKIIIKNLPFEATRKDIVELFSSFGHLKSARV 741
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
+K D + G+ FV+F + QA+ LQ L ++ ++ + ++ E+
Sbjct: 742 PKKFDSSA------RGFAFVEFSLLKEAEQAMDQLQGVHLLGRRLVMEYAQQDAENAEEE 795
Query: 673 VKRKSSNVAKQTGSKILV 690
++R + V KQ S+ L
Sbjct: 796 IERMTKKVQKQVASRELA 813
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
+ QTG ++ VRNI + A ++E +LF +GEL V + +G +GF +V+F
Sbjct: 304 IISQTG-RLFVRNISYTATEAEFRQLFSTYGELDEVHVAID-TRTGASKGFVYVKFQDPE 361
Query: 740 EAKRAMKAL 748
+A A K+L
Sbjct: 362 QALEAYKSL 370
>gi|259150262|emb|CAY87065.1| Mrd1p [Saccharomyces cerevisiae EC1118]
Length = 887
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 163/513 (31%), Positives = 247/513 (48%), Gaps = 94/513 (18%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I ++GR+F+RN+ YT E+D KLF +G L EV + +D T ++KGFA V F P++
Sbjct: 339 EKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKN 398
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKE--------------------------------- 417
A AY LD +F GR+LH++PG+ K+
Sbjct: 399 AVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNMPLKKQKELKRKAAASRQTFSW 458
Query: 418 -----NEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
N+ V G V + K +Q+++A + + + L + D++ FE G
Sbjct: 459 NSLYMNQDAVLGSVAAKLGLEK----SQLIDAENSSSAVKQALAEAHVIGDVRKYFESKG 514
Query: 473 -DLGR--------------VLVP--PYGIT----------------------GLVEFLQK 493
DL + +LV P+G T G + +Q
Sbjct: 515 VDLTKFSQLKSTNQRDDKVILVKNFPFGTTREELGEMFLPYGKLERLLMPPAGTIAIVQF 574
Query: 494 NQAKAA---FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
+A F L+Y +FK+ +YLE P+ F + E +EE E +
Sbjct: 575 RDTTSARAAFTKLSYKRFKDGIIYLERGPKDCFTKPAEADDLINNTSAKEEENPVEIKPS 634
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
N E N+ V E N DE+ P +++IKNLNF++T ++ FK
Sbjct: 635 SNDLMEANKD-VTEGSSNA-HDEDVIDGPTVSIFIKNLNFSTTNQNLTDKFKVFTGFVVA 692
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK G+ LSMG+GFV+F T+E N + + + +D H+I+LK S+R S++
Sbjct: 693 QVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQA-SQS 751
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF
Sbjct: 752 GNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGF 805
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
FVEF+ EA+ M L HL GRRLV+++
Sbjct: 806 AFVEFLLPKEAENVMDQL-HGVHLLGRRLVMQY 837
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 130/319 (40%), Gaps = 55/319 (17%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKA 274
++R I+VKN P G +++L F LP + + +A + F+D + A
Sbjct: 526 TNQRDDKVILVKNFPFGTTREELGEMF--LPYGKLERLLMPPAGTIAIVQFRDTTSARAA 583
Query: 275 LNKNKSFWKGKQLNIY--KYSKDNSAKYSGAAD--DNNNASMENIKAKHWKSQEDSVQFA 330
K S+ + K IY + KD K + A D +N +A E + S D ++
Sbjct: 584 FTK-LSYKRFKDGIIYLERGPKDCFTKPAEADDLINNTSAKEEENPVEIKPSSNDLMEAN 642
Query: 331 EDIAESGR--------------IFVRNLSYTVTEDDLTKLFEKYGP--LAEV-ILPIDKE 373
+D+ E IF++NL+++ T +LT F+ + +A+V P K
Sbjct: 643 KDVTEGSSNAHDEDVIDGPTVSIFIKNLNFSTTNQNLTDKFKVFTGFVVAQVKTKPDPKH 702
Query: 374 TDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCI 430
KT GF V F E A +DGTV G + L + + GN K +
Sbjct: 703 QGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQASQSGNTKTKSN--- 759
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGI 484
+S +II VKNLP+ D+ LF FG L V VP G
Sbjct: 760 -------------KKSGKII-VKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGF 805
Query: 485 TGLVEFLQKNQAKAAFNSL 503
VEFL +A+ + L
Sbjct: 806 -AFVEFLLPKEAENVMDQL 823
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 41/197 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFK-------------PLPLASVRTTFLGMAYIGFKDEKNCN 272
+I +KNL ++L FK P P +T +G ++ F+ ++ N
Sbjct: 664 SIFIKNLNFSTTNQNLTDKFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQAN 723
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+ A G D + + K H ++ + +
Sbjct: 724 AVI----------------------AAMDGTVIDGHKIQL---KLSHRQASQSGNTKTKS 758
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
+SG+I V+NL + T D+ +LF +G L V +P K+ DK+ +GFA V FL+P+ A
Sbjct: 759 NKKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVP--KKFDKSARGFAFVEFLLPKEA 816
Query: 392 TQAYQHLDGTVFLGRML 408
L G LGR L
Sbjct: 817 ENVMDQLHGVHLLGRRL 833
>gi|384245230|gb|EIE18725.1| hypothetical protein COCSUDRAFT_20380 [Coccomyxa subellipsoidea
C-169]
Length = 876
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 197/348 (56%), Gaps = 29/348 (8%)
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
ARS +LVKNLPY +L+ F G + R+++PP LV+F + A+ AF +L
Sbjct: 525 ARSPTTLLVKNLPYTASEAELEETFGKLGAIARLVLPPTRTLALVQFAEAADARRAFKAL 584
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
AY +F+ VPLYLEWAP VF+ + + + + + + D + V
Sbjct: 585 AYKRFQSVPLYLEWAPADVFS----------PDAPLQPRLQAQAVVAKKAKKVDTDEPV- 633
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC-----GPIASVTVARKKDP 618
EV + D+E E TT+Y+KNL F +T+ ++R HF G I + +VA++K P
Sbjct: 634 EVADLPAGDDEAE---STTIYVKNLAFATTDATLRAHFDAVVSAAGGSIRAASVAKRKGP 690
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSS 678
G+ LS G+GF++ + + A+K Q S LD H++ L+ S R + +A K +
Sbjct: 691 D--GKPLSSGFGFIECSSEDVAKIAIKKQQGSILDGHKLALQLSLRKVGGKAAKPSAKET 748
Query: 679 NVAKQT----GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
A T G+K++VRN+ F+A + +V LF FG++K RLPKK GS HRGF FV+
Sbjct: 749 AAAADTGKAKGTKLVVRNVAFEATRKDVAALFAPFGQIKSCRLPKKFDGS--HRGFAFVD 806
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD-NVEDIRKRTNRYF 781
F+TK EAK A +A+ THLYGRRLV+EWAE + ++++R +T F
Sbjct: 807 FLTKQEAKSAAEAVA-GTHLYGRRLVVEWAEADEAGLDELRAKTAARF 853
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 10/135 (7%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
+ + +QL+ F EKG +TD ++ T +G R+F F+G+ +AQAA+ YFN +++ + R
Sbjct: 13 QCSDQQLREHFSEKGDITDAKIMRTEDGHSRQFGFVGFRSVAEAQAAVKYFNRSFMGAQR 72
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKN---- 143
+ VE + P++WSKY SS YQKLH ++ KP+ ++ K KK +
Sbjct: 73 LTVEFAEKFRGSHLPRAWSKYTEGSSRYQKLHQDEENEE-KPKGVRELKKLKKQQRMGGT 131
Query: 144 -----DPTFSDFLQL 153
DP ++FLQL
Sbjct: 132 APEEEDPKLAEFLQL 146
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 80/136 (58%), Gaps = 15/136 (11%)
Query: 292 YSKDNSAKYSGA--ADDNNNASME------------NIKAKHWKSQEDSVQFAED-IAES 336
++ D +A+ +GA +DD++ ++ NI + ++E Q E I E+
Sbjct: 267 HAGDVAAQQAGAEASDDSDGDELDLDRMGSHGKAGTNIGGEGSAAEEVRAQTKEARIEET 326
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
GR+FVRNL Y+ TE DL + F ++G L+EV + +DK T K+KGFAL+ + A A +
Sbjct: 327 GRLFVRNLPYSATEADLAEAFGQHGQLSEVHIVVDKATRKSKGFALIQYEEVADAITAKE 386
Query: 397 HLDGTVFLGRMLHLIP 412
LD ++F GR+LH++P
Sbjct: 387 ELDESIFQGRLLHVLP 402
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKY-----GPLAEVILPIDKETDK---TKGFAL 382
+D AES I+V+NL++ T+ L F+ G + + K D + GF
Sbjct: 642 DDEAESTTIYVKNLAFATTDATLRAHFDAVVSAAGGSIRAASVAKRKGPDGKPLSSGFGF 701
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
+ + A A + G++ G L L K V GK S ++ A
Sbjct: 702 IECSSEDVAKIAIKKQQGSILDGHKLALQLSLRK-----VGGKA-AKPSAKETAAAADTG 755
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-----PYGITGLVEFLQKNQAK 497
+A+ +++ V+N+ + D+ ALF PFG + +P + V+FL K +AK
Sbjct: 756 KAKGTKLV-VRNVAFEATRKDVAALFAPFGQIKSCRLPKKFDGSHRGFAFVDFLTKQEAK 814
Query: 498 AAFNSLAYTKFKEVPLYLEWA 518
+A ++A T L +EWA
Sbjct: 815 SAAEAVAGTHLYGRRLVVEWA 835
>gi|367001456|ref|XP_003685463.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
gi|357523761|emb|CCE63029.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
Length = 872
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 206/376 (54%), Gaps = 38/376 (10%)
Query: 419 EGNVDGKVHCCISERKLD-AFNQVVEARSKR---IILVKNLPYRTLPTDLKALFEPFGDL 474
E +V G V ++ +D A V+ + +KR +ILVKN P+ T +L LF PFG +
Sbjct: 486 EAHVIGDVRKYFEDKGVDIASFSVLRSTNKRDDTVILVKNFPFGTTVEELSDLFLPFGKI 545
Query: 475 GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVF------AEAKE 528
R L+PP G ++++ A+AAF SLAY +FK +YLE P F + E
Sbjct: 546 DRFLMPPAGTIAIIQYRDVTSARAAFRSLAYKRFKSGIIYLEKGPSNCFTRDANATDGVE 605
Query: 529 KSKGKEKEKNEEEGEEGE--EEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIK 586
S KE+E E + G+ E K N E+D+ V + P +++IK
Sbjct: 606 SSTPKEEEVKEIKPSIGDMMEVKTSNNEEQDSTDNVVD-------------GPTVSIFIK 652
Query: 587 NLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKV 646
NLNF++T + + FK V K DPK G+ LSMG+GF +F T+E A+
Sbjct: 653 NLNFSTTSQQLSQQFKNFNGFIVAQVKTKSDPKIEGKILSMGFGFAEFKTKEQALAAISA 712
Query: 647 LQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGS-KILVRNIPFQAKQSEVEEL 705
+ S +D H+I++K S+R + T K SNV+++ S KI+V+N+PF+A + +V EL
Sbjct: 713 MDGSVIDGHKIQIKLSHR----QGTASK---SNVSQRKPSGKIIVKNLPFEATRKDVFEL 765
Query: 706 FKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW-- 763
F +FG+LK VR+PKK S RGF FVEF+ EA+ AM L Q HL GRRLV+++
Sbjct: 766 FSSFGQLKSVRVPKKFDKSA--RGFAFVEFLLPKEAENAMDQL-QGVHLLGRRLVIQYAQ 822
Query: 764 AEEADNVEDIRKRTNR 779
AE D E+I + T +
Sbjct: 823 AEAVDAEEEISRMTKK 838
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Query: 302 GAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYG 361
G D + ++A+ KSQE+ E I+ +GR+F+RN+ YT TE D LFE +G
Sbjct: 299 GGNDTVEEEKIPGVEAEPEKSQEELA--IEKISSTGRLFLRNILYTSTEKDFRDLFEPFG 356
Query: 362 PLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
L EV + +D T ++KGFA V + +A QAY +LD +F GR+LH++PG+ K++
Sbjct: 357 ELEEVHVALDTRTGQSKGFAYVLYKDSANAVQAYINLDKQIFQGRLLHILPGESKKS 413
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 132/346 (38%), Gaps = 68/346 (19%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LP------------LASVRTTFL 258
+KR I+VKN P G ++L F P +P + S R F
Sbjct: 513 TNKRDDTVILVKNFPFGTTVEELSDLFLPFGKIDRFLMPPAGTIAIIQYRDVTSARAAFR 572
Query: 259 GMAYIGFKD-----EKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASME 313
+AY FK EK + ++ + G + + K + K S M
Sbjct: 573 SLAYKRFKSGIIYLEKGPSNCFTRDANATDGVESSTPKEEEVKEIKPS-------IGDMM 625
Query: 314 NIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE 373
+K + + Q+ + + S IF++NL+++ T L++ F+ + ++ + +
Sbjct: 626 EVKTSNNEEQDSTDNVVDGPTVS--IFIKNLNFSTTSQQLSQQFKNFNGF--IVAQVKTK 681
Query: 374 TDK-------TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKV 426
+D + GF F E A A +DG+V G H I K +G
Sbjct: 682 SDPKIEGKILSMGFGFAEFKTKEQALAAISAMDGSVIDG---HKIQIKLSHRQGTAS--- 735
Query: 427 HCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------ 480
+S+RK I+VKNLP+ D+ LF FG L V VP
Sbjct: 736 KSNVSQRKPSG-----------KIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKS 784
Query: 481 PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA-PEGVFAE 525
G VEFL +A+ A + L L +++A E V AE
Sbjct: 785 ARGF-AFVEFLLPKEAENAMDQLQGVHLLGRRLVIQYAQAEAVDAE 829
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TDV++ G RRFAFIG+ ED A+ A+ YFN +++ ++RI+V + ++ D +PK
Sbjct: 41 ITDVKILKDKNGTSRRFAFIGFLTEDDARDAIRYFNGSFIDTARIQVSEATSFADPNRPK 100
Query: 104 S 104
S
Sbjct: 101 S 101
>gi|365762580|gb|EHN04114.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 887
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 163/513 (31%), Positives = 247/513 (48%), Gaps = 94/513 (18%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I ++GR+F+RN+ YT E+D KLF +G L EV + +D T ++KGFA V F P++
Sbjct: 339 EKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKN 398
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKE--------------------------------- 417
A AY LD +F GR+LH++PG+ K+
Sbjct: 399 AVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNMPLKKQKELKRKAAASRQTFSW 458
Query: 418 -----NEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
N+ V G V + K +Q+++A + + + L + D++ FE G
Sbjct: 459 NSLYMNQDAVLGSVAAKLGLEK----SQLIDAENSSSAVKQALAEAHVIGDVRKYFESKG 514
Query: 473 -DLGR--------------VLVP--PYGIT----------------------GLVEFLQK 493
DL + +LV P+G T G + +Q
Sbjct: 515 VDLTKFSQLKSTNQRDDKVILVKNFPFGTTREELGEMFLPYGKLERLLMPPAGTIAIVQF 574
Query: 494 NQAKAA---FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
+A F L+Y +FK+ +YLE P+ F + E +EE E +
Sbjct: 575 RDTTSARAAFTKLSYKRFKDGIIYLEKGPKDCFTKPAEADDLINNTSAKEEENPVEIKPS 634
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
N E N+ V E N DE+ P +++IKNLNF++T ++ FK
Sbjct: 635 SNDLMEANKD-VTEGSSNA-HDEDVIDGPTVSIFIKNLNFSTTNQNLTDKFKVFTGFVVA 692
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK G+ LSMG+GFV+F T+E N + + + +D H+I+LK S+R S++
Sbjct: 693 QVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQA-SQS 751
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF
Sbjct: 752 GNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGF 805
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
FVEF+ EA+ M L HL GRRLV+++
Sbjct: 806 AFVEFLLPKEAENVMDQL-HGVHLLGRRLVMQY 837
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 130/319 (40%), Gaps = 55/319 (17%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKA 274
++R I+VKN P G +++L F LP + + +A + F+D + A
Sbjct: 526 TNQRDDKVILVKNFPFGTTREELGEMF--LPYGKLERLLMPPAGTIAIVQFRDTTSARAA 583
Query: 275 LNKNKSFWKGKQLNIY--KYSKDNSAKYSGAAD--DNNNASMENIKAKHWKSQEDSVQFA 330
K S+ + K IY K KD K + A D +N +A E + S D ++
Sbjct: 584 FTK-LSYKRFKDGIIYLEKGPKDCFTKPAEADDLINNTSAKEEENPVEIKPSSNDLMEAN 642
Query: 331 EDIAESGR--------------IFVRNLSYTVTEDDLTKLFEKYGP--LAEV-ILPIDKE 373
+D+ E IF++NL+++ T +LT F+ + +A+V P K
Sbjct: 643 KDVTEGSSNAHDEDVIDGPTVSIFIKNLNFSTTNQNLTDKFKVFTGFVVAQVKTKPDPKH 702
Query: 374 TDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCI 430
KT GF V F E A +DGTV G + L + + GN K +
Sbjct: 703 QGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQASQSGNTKTKSN--- 759
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGI 484
+S +II VKNLP+ D+ LF FG L V VP G
Sbjct: 760 -------------KKSGKII-VKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGF 805
Query: 485 TGLVEFLQKNQAKAAFNSL 503
VEFL +A+ + L
Sbjct: 806 -AFVEFLLPKEAENVMDQL 823
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 41/197 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFK-------------PLPLASVRTTFLGMAYIGFKDEKNCN 272
+I +KNL ++L FK P P +T +G ++ F+ ++ N
Sbjct: 664 SIFIKNLNFSTTNQNLTDKFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQAN 723
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+ A G D + + K H ++ + +
Sbjct: 724 AVI----------------------AAMDGTVIDGHKIQL---KLSHRQASQSGNTKTKS 758
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
+SG+I V+NL + T D+ +LF +G L V +P K+ DK+ +GFA V FL+P+ A
Sbjct: 759 NKKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVP--KKFDKSARGFAFVEFLLPKEA 816
Query: 392 TQAYQHLDGTVFLGRML 408
L G LGR L
Sbjct: 817 ENVMDQLHGVHLLGRRL 833
>gi|6325369|ref|NP_015437.1| Mrd1p [Saccharomyces cerevisiae S288c]
gi|74676381|sp|Q06106.1|MRD1_YEAST RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|914983|gb|AAB68082.1| Ypr112cp [Saccharomyces cerevisiae]
gi|285815635|tpg|DAA11527.1| TPA: Mrd1p [Saccharomyces cerevisiae S288c]
gi|392296115|gb|EIW07218.1| Mrd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 887
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 163/513 (31%), Positives = 247/513 (48%), Gaps = 94/513 (18%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I ++GR+F+RN+ YT E+D KLF +G L EV + +D T ++KGFA V F ++
Sbjct: 339 EKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKN 398
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKE--------------------------------- 417
A AY LD +F GR+LH++PG+ K+
Sbjct: 399 AVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNMPLKKQKELKRKAAASRQTFSW 458
Query: 418 -----NEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
N+ V G V + K +Q+++A + + + L + D++ FE G
Sbjct: 459 NSLYMNQDAVLGSVAAKLGLEK----SQLIDAENSSSAVKQALAEAHVIGDVRKYFESKG 514
Query: 473 -DLGR--------------VLVP--PYGIT----------------------GLVEFLQK 493
DL + +LV P+G T G + +Q
Sbjct: 515 VDLTKFSQLKSTNQRDDKVILVKNFPFGTTREELGEMFLPYGKLERLLMPPAGTIAIVQF 574
Query: 494 NQAKAA---FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
+A F L+Y +FK+ +YLE P+ F + E +EE E +
Sbjct: 575 RDTTSARAAFTKLSYKRFKDGIIYLERGPKDCFTKPAEADDLINNTSAKEEENPVEVKPS 634
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
N E N+ V E N DE+ P +++IKNLNF++T ++ FK
Sbjct: 635 SNDLMEANKD-VTEGSSNA-HDEDVIDGPTVSIFIKNLNFSTTNQNLTDRFKVFTGFVVA 692
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK G+ LSMG+GFV+F T+E N + + + +D H+I+LK S+R S++
Sbjct: 693 QVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQA-SQS 751
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF
Sbjct: 752 GNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGF 805
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
FVEF+ EA+ AM L HL GRRLV+++
Sbjct: 806 AFVEFLLPKEAENAMDQL-HGVHLLGRRLVMQY 837
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 131/319 (41%), Gaps = 55/319 (17%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKA 274
++R I+VKN P G +++L F LP + + +A + F+D + A
Sbjct: 526 TNQRDDKVILVKNFPFGTTREELGEMF--LPYGKLERLLMPPAGTIAIVQFRDTTSARAA 583
Query: 275 LNKNKSFWKGKQLNIY--KYSKDNSAKYSGAAD--DNNNASMENIKAKHWKSQEDSVQFA 330
K S+ + K IY + KD K + A D +N +A E + S D ++
Sbjct: 584 FTK-LSYKRFKDGIIYLERGPKDCFTKPAEADDLINNTSAKEEENPVEVKPSSNDLMEAN 642
Query: 331 EDIAESGR--------------IFVRNLSYTVTEDDLTKLFEKYGP--LAEV-ILPIDKE 373
+D+ E IF++NL+++ T +LT F+ + +A+V P K
Sbjct: 643 KDVTEGSSNAHDEDVIDGPTVSIFIKNLNFSTTNQNLTDRFKVFTGFVVAQVKTKPDPKH 702
Query: 374 TDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCI 430
KT GF V F E A +DGTV G + L + + GN K +
Sbjct: 703 QGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQASQSGNTKTKSN--- 759
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGI 484
+S +II VKNLP+ D+ LF FG L V VP G
Sbjct: 760 -------------KKSGKII-VKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGF 805
Query: 485 TGLVEFLQKNQAKAAFNSL 503
VEFL +A+ A + L
Sbjct: 806 -AFVEFLLPKEAENAMDQL 823
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 41/197 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFK-------------PLPLASVRTTFLGMAYIGFKDEKNCN 272
+I +KNL ++L FK P P +T +G ++ F+ ++ N
Sbjct: 664 SIFIKNLNFSTTNQNLTDRFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQAN 723
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+ A G D + + K H ++ + +
Sbjct: 724 AVI----------------------AAMDGTVIDGHKIQL---KLSHRQASQSGNTKTKS 758
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
+SG+I V+NL + T D+ +LF +G L V +P K+ DK+ +GFA V FL+P+ A
Sbjct: 759 NKKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVP--KKFDKSARGFAFVEFLLPKEA 816
Query: 392 TQAYQHLDGTVFLGRML 408
A L G LGR L
Sbjct: 817 ENAMDQLHGVHLLGRRL 833
>gi|67516279|ref|XP_658025.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|74681510|sp|Q5BGA9.1|MRD1_EMENI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|40747364|gb|EAA66520.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|259489335|tpe|CBF89520.1| TPA: Multiple RNA-binding domain-containing protein 1
[Source:UniProtKB/Swiss-Prot;Acc:Q5BGA9] [Aspergillus
nidulans FGSC A4]
Length = 819
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 186/333 (55%), Gaps = 30/333 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF Q R ILVKN Y T DL+ LFEPFG + R+L+PP G +V F + +
Sbjct: 467 LDAFKQ--RERGNLAILVKNFSYGTKTEDLRKLFEPFGQITRLLMPPSGTIAIVAFARPD 524
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF SLAY K + L+LE AP+ +F EA + E
Sbjct: 525 EAQKAFKSLAYRKLGDSILFLEKAPKDLF-EADVPPQNPLPETKAV-------------- 569
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
QG + ++ + E TL+IKNLNF++T S+ F+ S +
Sbjct: 570 ----SQGFSTADTFAADEGDEEVMATATLFIKNLNFSTTNQSLIEAFRPLDGFVSARIKT 625
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK+PGQ LSMG+GF F T+ AL V+ +LD H + ++ S++ +++ +
Sbjct: 626 KPDPKNPGQTLSMGFGFADFKTKAQAQAALAVMNGYTLDRHTLVVRASHKGMDAAE---E 682
Query: 675 RKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGFG
Sbjct: 683 RRKEDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGFG 740
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
F +F++ EA+ AM AL ++THL GRRLVLE+A
Sbjct: 741 FADFVSAREAENAMDAL-KNTHLLGRRLVLEFA 772
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E+I S R+FVRNLSY E +L +F +G + E+ + D +KGFA V + P+
Sbjct: 289 ENIRISARLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDA 348
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A +AY++LDG +F GR+LH++P K
Sbjct: 349 AVEAYRNLDGKIFQGRLLHILPASQK 374
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 140/366 (38%), Gaps = 73/366 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N SY +DL KLFE +G + +++P + A+V F P+ A +A++ L
Sbjct: 480 ILVKNFSYGTKTEDLRKLFEPFGQITRLLMP------PSGTIAIVAFARPDEAQKAFKSL 533
Query: 399 DGTVFLGRMLHLIPGKPKE-NEGNVDGKVHCCISERKLDAFNQV---------VEARSKR 448
LG + + PK+ E +V + ++ F+ E +
Sbjct: 534 -AYRKLGDSILFLEKAPKDLFEADVPPQNPLPETKAVSQGFSTADTFAADEGDEEVMATA 592
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPP----YGIT-----GLVEFLQKNQAK 497
+ +KNL + T L F P R+ P G T G +F K QA+
Sbjct: 593 TLFIKNLNFSTTNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMGFGFADFKTKAQAQ 652
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEED 557
AA + L + + +G+ A EE +KE+TA++
Sbjct: 653 AALAVMNGYTLDRHTLVVRASHKGMDA--------------------AEERRKEDTAKKI 692
Query: 558 NQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
+ T + IKNL F +T+ +R F G + SV V +K D
Sbjct: 693 AARR-------------------TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFD 733
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
+ G+GF F + A+ L+N+ L ++ L+ +N ++R
Sbjct: 734 RSA------RGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFANEEAIDAEEEIQRIE 787
Query: 678 SNVAKQ 683
V +Q
Sbjct: 788 KKVGEQ 793
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 23/199 (11%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL---PIDKETDKT--KGFALVTF 385
E++ + +F++NL+++ T L + F + P K +T GF F
Sbjct: 586 EEVMATATLFIKNLNFSTTNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMGFGFADF 645
Query: 386 LMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
A A ++G L R ++ K + RK D ++ R
Sbjct: 646 KTKAQAQAALAVMNGYT-LDRHTLVVRASHK--------GMDAAEERRKEDTAKKIAARR 696
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAA 499
+K I++KNLP++ D+++LF +G L V VP G G +F+ +A+ A
Sbjct: 697 TK--IIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGF-GFADFVSAREAENA 753
Query: 500 FNSLAYTKFKEVPLYLEWA 518
++L T L LE+A
Sbjct: 754 MDALKNTHLLGRRLVLEFA 772
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T +QLK FE + VTD + RR F+G+ + AQ A+ YFN TY+ S+I
Sbjct: 15 LTNDQLKKHFETRFHVTDAHVLPK-----RRIGFVGFKSSEAAQQAVSYFNKTYMRMSKI 69
Query: 89 KVE 91
V+
Sbjct: 70 SVD 72
>gi|190344798|gb|EDK36553.2| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 270/542 (49%), Gaps = 102/542 (18%)
Query: 314 NIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE 373
NI+ + K +E +E IA++GR+FVRN+ YT TE++ LF+KYG L EV + +D
Sbjct: 329 NIEVQETKQEESP---SEKIAKTGRLFVRNILYTSTEEEFRTLFQKYGSLEEVHIAVDTR 385
Query: 374 TDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN--------------- 418
T K+KGF V F P+ A +AY+ LD +F GR+LH++P + K++
Sbjct: 386 TGKSKGFVYVQFKQPKDAVEAYKSLDKQIFQGRLLHILPAEAKKDHRLDEFDIKNLPLKK 445
Query: 419 EGNVDGKVHCCISERKLDAF-------------------NQVVEARSKRIILVKNLPYRT 459
+ ++ K S+ ++ + +++A S + + L
Sbjct: 446 QRDLKKKAQAAKSQFSWNSLYMNSDAVLESVAAKMGVSKSDLIDAESSSSGVKQALAEAH 505
Query: 460 LPTDLKALFEPFG-----------DLGRVLVP--PYGITGLVE----FLQKNQAKAAF-- 500
+ D++ FE G D VLV PYG TG+ E F Q K
Sbjct: 506 VIGDVRKYFESKGVDLTSFSKKERDDKIVLVKNFPYG-TGVNELNEMFGQYGPIKRTLMP 564
Query: 501 --NSLAYTKFKEVP------------------LYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
++A +F++ P LYLE P+G+F +E + E +E
Sbjct: 565 PAGTIAVIEFQDAPSARAAFTKLAYRKFNNSILYLEKGPKGLF--IREPVTSEVVEVEKE 622
Query: 541 EGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRH 600
+ E+G E K + + N +DE P ++++KNLNF++T+ +
Sbjct: 623 KVEQGIEPKVTANS----------LISNDAKDETEIEGPTVSVFVKNLNFSTTQPQLASV 672
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
F+K AS + K DPK G LSMG+GFV+F ++E A+ L + LD H+++LK
Sbjct: 673 FEKLPGFASAIIKTKPDPKKSGATLSMGFGFVEFKSKEEAEAAISALNDYVLDGHKLQLK 732
Query: 661 RSNRN-LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK 719
S+R +S+ K +N KI+++N+PF+A + +V ELF AFG+LK VR+PK
Sbjct: 733 LSHRQGGQSKGGASKTNKTN-------KIIIKNLPFEATRKDVLELFGAFGQLKSVRVPK 785
Query: 720 KMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVE-DIRKRT 777
K S RGF FVEF+ EA+ AM L + HL GRRLV+++AE +A++ E +I K T
Sbjct: 786 KFDKSA--RGFAFVEFVLLKEAENAMDQL-EGVHLLGRRLVMQYAEKDAEDAEAEIAKMT 842
Query: 778 NR 779
+
Sbjct: 843 KK 844
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 33 QLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEK 92
+L+ F ++G VTDV+L G+ RRFAF+GY D A+ A YF+ +++ ++RI VE
Sbjct: 70 KLRDHFSKQGNVTDVKLMKKRNGESRRFAFVGYKSIDDAEKAAKYFHQSFMDTARIHVEL 129
Query: 93 CSNLGDTTKPKSW--SKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDF 150
D T P S+ + + ++ ++ +Q K + TK S+ K+ +N+P +F
Sbjct: 130 AKTFSDPTVPLSFREQQRIKQNRLQEQEERLSQQQLFKRQKTK-SQIDKEIENNPKLQEF 188
Query: 151 LQL 153
+++
Sbjct: 189 MEV 191
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 44/198 (22%)
Query: 226 TIVVKNLPAGVKKKDLKAYF-------------KPLPLASVRTTFLGMAYIGFKDEKNCN 272
++ VKNL + L + F KP P S T +G ++ FK ++
Sbjct: 654 SVFVKNLNFSTTQPQLASVFEKLPGFASAIIKTKPDPKKSGATLSMGFGFVEFKSKEEAE 713
Query: 273 KALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE 331
A++ N G +L + K S + G A N
Sbjct: 714 AAISALNDYVLDGHKLQL-KLSHRQGGQSKGGASKTN----------------------- 749
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEH 390
++ +I ++NL + T D+ +LF +G L V +P K+ DK+ +GFA V F++ +
Sbjct: 750 ---KTNKIIIKNLPFEATRKDVLELFGAFGQLKSVRVP--KKFDKSARGFAFVEFVLLKE 804
Query: 391 ATQAYQHLDGTVFLGRML 408
A A L+G LGR L
Sbjct: 805 AENAMDQLEGVHLLGRRL 822
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVIL---PIDKETDKT--KGFALVTFLMPEHATQ 393
+FV+NL+++ T+ L +FEK A I+ P K++ T GF V F E A
Sbjct: 655 VFVKNLNFSTTQPQLASVFEKLPGFASAIIKTKPDPKKSGATLSMGFGFVEFKSKEEAEA 714
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A L+ V G L L K +G G+ S K + N+ I++K
Sbjct: 715 AISALNDYVLDGHKLQL---KLSHRQG---GQSKGGAS--KTNKTNK---------IIIK 757
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAYTK 507
NLP+ D+ LF FG L V VP G VEF+ +A+ A + L
Sbjct: 758 NLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSARGF-AFVEFVLLKEAENAMDQLEGVH 816
Query: 508 FKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEE 544
L +++A + E +K +K KN+ +E
Sbjct: 817 LLGRRLVMQYAEKDAEDAEAEIAKMTKKVKNQVATQE 853
>gi|154296406|ref|XP_001548634.1| hypothetical protein BC1G_13029 [Botryotinia fuckeliana B05.10]
gi|347839105|emb|CCD53677.1| similar to multiple RNA-binding domain-containing protein 1
[Botryotinia fuckeliana]
Length = 838
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 193/345 (55%), Gaps = 27/345 (7%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF + R ILVKN Y +L+ +FE FG + RVL+PP G +VEF Q
Sbjct: 482 LDAFKK--RERGDTAILVKNFTYGMTLEELRKMFEEFGQVIRVLMPPTGTIAIVEFAQPT 539
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
A+AAF SLAY + K+ L+LE AP+ +F +N + + K +
Sbjct: 540 HARAAFASLAYRRMKDTVLFLEKAPKDLFTGPPPAQPVATINRN---ADNAADPKLSTSD 596
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ GV ENV+ TTL+++NLNF++T + FK S V
Sbjct: 597 LLERDSGV----ENVDT---------TTLFVRNLNFSTTSQRLTEIFKPLDGFLSARVNT 643
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GF++F T+ A+K + +LD H++ +K S++ ++A K
Sbjct: 644 KTDPKKPGQVLSMGFGFIEFRTKSQAQAAIKAMDGYTLDNHKLLVKASHKG--ADAAEEK 701
Query: 675 RKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
RK K G +K++V+N+PF+A +S++ +LF +G+L+ VR+PKK S RGF F
Sbjct: 702 RKEDRAKKLAGKRTKLIVKNLPFEASKSDIRKLFGTYGQLRSVRMPKKFDHS--TRGFAF 759
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE--ADNVEDIRK 775
+FIT EA+ A++AL + THL GRRLV+++A E D E+I K
Sbjct: 760 ADFITAREAENALEAL-KDTHLLGRRLVIDFASEETVDAEEEIEK 803
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I SGR+FVRNL Y+ TEDDL K FE+YG L E+ LP+D + +KGF LV + P
Sbjct: 305 ETIKASGRLFVRNLPYSATEDDLRKHFEQYGTLEEIHLPVDAKG-ASKGFVLVQYTDPNA 363
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A +AY ++DG F GR+LH++P K +
Sbjct: 364 AAEAYHNVDGEPFQGRLLHILPAAAKRD 391
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 134/340 (39%), Gaps = 80/340 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N +Y +T ++L K+FE++G + V++P T A+V F P HA A+ L
Sbjct: 495 ILVKNFTYGMTLEELRKMFEEFGQVIRVLMP------PTGTIAIVEFAQPTHARAAFASL 548
Query: 399 ------DGTVFLGRML-HLIPGKPKEN-----EGNVDGKVHCCISERKLDAFNQVVEARS 446
D +FL + L G P N D +S L + VE
Sbjct: 549 AYRRMKDTVLFLEKAPKDLFTGPPPAQPVATINRNADNAADPKLSTSDLLERDSGVENVD 608
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLVEFLQ 492
+ V+NL + T L +F+P G+VL + G +EF
Sbjct: 609 TTTLFVRNLNFSTTSQRLTEIFKPLDGFLSARVNTKTDPKKPGQVLSMGF---GFIEFRT 665
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
K+QA+AA ++ L ++ + +G + EE++KE+
Sbjct: 666 KSQAQAAIKAMDGYTLDNHKLLVKASHKG--------------------ADAAEEKRKED 705
Query: 553 TAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
A++ + T L +KNL F +++ IR+ F G + SV +
Sbjct: 706 RAKKLAGK-------------------RTKLIVKNLPFEASKSDIRKLFGTYGQLRSVRM 746
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+K D + G+ F F T AL+ L+++ L
Sbjct: 747 PKKFDHS------TRGFAFADFITAREAENALEALKDTHL 780
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+++ K F K +TD +L RR +IGY ++A A+ YFN ++V S+I
Sbjct: 15 ITEDEFKTHFGAKQEITDAKLI-----SHRRIGYIGYKTPEEAAKAVKYFNKSFVRMSKI 69
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKN----D 144
VE + D + P S KL + + D K + ++ +K + D
Sbjct: 70 GVEIARPISDASLPISRKAQREQERENNKLRQLKQEADAKVSESLNTGTKRKRSDVDIAD 129
Query: 145 PTFSDFLQL 153
P +F+++
Sbjct: 130 PKLQEFMEV 138
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 34/196 (17%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-------------PLASVRTTFLGMAYIGFKDEKNCN 272
T+ V+NL + L FKPL P + +G +I F+ +
Sbjct: 611 TLFVRNLNFSTTSQRLTEIFKPLDGFLSARVNTKTDPKKPGQVLSMGFGFIEFRTKSQAQ 670
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
A+ G L+ +K S K + AA++ K +ED + +
Sbjct: 671 AAIKA----MDGYTLDNHKLLVKASHKGADAAEE--------------KRKEDRAK--KL 710
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ ++ V+NL + ++ D+ KLF YG L V +P K T+GFA F+ A
Sbjct: 711 AGKRTKLIVKNLPFEASKSDIRKLFGTYGQLRSVRMP-KKFDHSTRGFAFADFITAREAE 769
Query: 393 QAYQHLDGTVFLGRML 408
A + L T LGR L
Sbjct: 770 NALEALKDTHLLGRRL 785
>gi|361124073|gb|EHK96194.1| putative Multiple RNA-binding domain-containing protein 1 [Glarea
lozoyensis 74030]
Length = 763
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 191/344 (55%), Gaps = 24/344 (6%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R ILVKN PY +L+ +FE FG + RVL+PP G +VEF Q A+AAF SLA
Sbjct: 414 RGDTSILVKNFPYGMTLEELRKMFEEFGQVLRVLMPPTGTIAIVEFAQPTHARAAFGSLA 473
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + K+ LYLE P+ +F A + + E + + + E G+
Sbjct: 474 YRRMKDSILYLEKGPKDLFTTAASTAAPASLGQQEADSSAHKVSASDLLERESANDGLDT 533
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
TTL+++NLNF +T + FK S V K DPK PGQ
Sbjct: 534 ----------------TTLFVRNLNFTTTSARLTETFKPLDGFLSARVNTKTDPKKPGQV 577
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
LSMG+GF++F T++ ALK + +LD+H++ +K S++ + +A +RK K +
Sbjct: 578 LSMGFGFLEFRTKDQAQAALKAMDGYTLDDHKLLIKASHKGV--DAAEERRKEDRAKKIS 635
Query: 685 G--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
G +KI+++N+PF+A + ++ LF +G+L+ VR+PKK S RGF F +FIT EA+
Sbjct: 636 GKRTKIIIKNLPFEASKKDIRTLFGTYGQLRSVRMPKKFDHSA--RGFAFADFITAREAE 693
Query: 743 RAMKALCQSTHLYGRRLVLEW-AEEADNVEDIRKRTNRYFGTAV 785
A++AL + THL GRRLVLE+ AE++ + E+ +R + G+ V
Sbjct: 694 NALEAL-KDTHLLGRRLVLEFAAEDSIDAEEEIERMQKKVGSQV 736
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E+IA++GR+FVRNL YT TEDDL FE +GPL E+ L +D + +KGF LV + PE
Sbjct: 229 EEIAKNGRLFVRNLPYTATEDDLRNHFEPFGPLEEIHLAVDA-SGTSKGFLLVQYSNPES 287
Query: 391 ATQAYQHLDGTVFLGRMLHLIPG 413
A +A+ LDG F GR+LH++P
Sbjct: 288 AAEAFHQLDGEPFQGRLLHILPA 310
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 149/383 (38%), Gaps = 85/383 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N Y +T ++L K+FE++G + V++P T A+V F P HA A+ L
Sbjct: 419 ILVKNFPYGMTLEELRKMFEEFGQVLRVLMP------PTGTIAIVEFAQPTHARAAFGSL 472
Query: 399 DGTVFLGRMLHLIPGKPKE--------------NEGNVDGKVHCCISERKLDAFNQVVEA 444
+L+L G PK+ + D H +S L +
Sbjct: 473 AYRRMKDSILYLEKG-PKDLFTTAASTAAPASLGQQEADSSAH-KVSASDLLERESANDG 530
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLVEF 490
+ V+NL + T L F+P G+VL + G +EF
Sbjct: 531 LDTTTLFVRNLNFTTTSARLTETFKPLDGFLSARVNTKTDPKKPGQVLSMGF---GFLEF 587
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
K+QA+AA ++ + L ++ + +GV A EE +K
Sbjct: 588 RTKDQAQAALKAMDGYTLDDHKLLIKASHKGVDA--------------------AEERRK 627
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
E+ A++ + + T + IKNL F +++ IR F G + SV
Sbjct: 628 EDRAKKISGK-------------------RTKIIIKNLPFEASKKDIRTLFGTYGQLRSV 668
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
+ +K D + G+ F F T AL+ L+++ L ++ L+ + +
Sbjct: 669 RMPKKFD------HSARGFAFADFITAREAENALEALKDTHLLGRRLVLEFAAEDSIDAE 722
Query: 671 TTVKRKSSNVAKQTGSKILVRNI 693
++R V Q SK+ +R +
Sbjct: 723 EEIERMQKKVGSQV-SKVAMRKL 744
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 135/320 (42%), Gaps = 34/320 (10%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPLP--LASVRTTFLGMAYIGFKDEKNCNKALNK 277
+R +I+VKN P G+ ++L+ F+ L + +A + F + A
Sbjct: 412 RERGDTSILVKNFPYGMTLEELRKMFEEFGQVLRVLMPPTGTIAIVEFAQPTHARAAFG- 470
Query: 278 NKSFWKGKQLNIY--KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQ--FAEDI 333
+ ++ + K +Y K KD + A + E + H S D ++ A D
Sbjct: 471 SLAYRRMKDSILYLEKGPKDLFTTAASTAAPASLGQQEADSSAHKVSASDLLERESANDG 530
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP-IDKETDKTK-------GFALVTF 385
++ +FVRNL++T T LT+ F+ PL + ++ +TD K GF + F
Sbjct: 531 LDTTTLFVRNLNFTTTSARLTETFK---PLDGFLSARVNTKTDPKKPGQVLSMGFGFLEF 587
Query: 386 LMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
+ A A + +DG L + K + VD RK D ++ R
Sbjct: 588 RTKDQAQAALKAMDGYTLDDHKLLI-----KASHKGVD----AAEERRKEDRAKKISGKR 638
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP---PYGITG--LVEFLQKNQAKAAF 500
+K I++KNLP+ D++ LF +G L V +P + G +F+ +A+ A
Sbjct: 639 TK--IIIKNLPFEASKKDIRTLFGTYGQLRSVRMPKKFDHSARGFAFADFITAREAENAL 696
Query: 501 NSLAYTKFKEVPLYLEWAPE 520
+L T L LE+A E
Sbjct: 697 EALKDTHLLGRRLVLEFAAE 716
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 19/99 (19%)
Query: 562 VPEVEENVE------EDEEREPEP-------DTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
PEVE + E E+E +P+P + L+++NL + +TED +R HF+ GP+
Sbjct: 203 APEVEASPEQTVVPLEEEPEKPDPVLEEIAKNGRLFVRNLPYTATEDDLRNHFEPFGPLE 262
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVL 647
+ +A S G+ VQ+ ES +A L
Sbjct: 263 EIHLAVD------ASGTSKGFLLVQYSNPESAAEAFHQL 295
>gi|358372076|dbj|GAA88681.1| pre-rRNA processing protein Mrd1 [Aspergillus kawachii IFO 4308]
Length = 825
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 188/333 (56%), Gaps = 31/333 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
++AF Q R ILVKN Y +L+ +FEPFG + R+L+PP G +VEF + +
Sbjct: 473 IEAFKQ--RERGNTAILVKNFSYGVKTDELRKMFEPFGQITRLLMPPSGTIAIVEFSRPD 530
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY K + L+LE AP+ +F A K + K +G +TA
Sbjct: 531 EAQKAFKGLAYRKLGDSILFLEKAPKDLFDAAAVPQKATIETKAVSQGF--------STA 582
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ DE + P TTL++KNLNF +T S F+ S +
Sbjct: 583 D------------TFAADEVDDLTPTTTLFVKNLNFATTTQSFVDLFRPLDGFVSAKIKT 630
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GFV+F ++ AL + LD+H++ ++ S+R +++ +
Sbjct: 631 KPDPKHPGQTLSMGFGFVEFRSKAQAQSALAAMNGYKLDQHELVVRVSHRGMDA---AEE 687
Query: 675 RKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGFG
Sbjct: 688 RRREDTAKKVAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGFG 745
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
F +F++ EA+ AM AL ++THL GR+LVLE+A
Sbjct: 746 FADFVSAREAENAMDAL-KNTHLLGRKLVLEFA 777
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S R+FVRNL+Y +E DL LF +G + E+ + D + +KGFA + +L + A +AY
Sbjct: 300 SARLFVRNLAYDTSESDLEPLFAPFGRIEEIHVAFDTRVNTSKGFAYIQYLDADAAVEAY 359
Query: 396 QHLDGTVFLGRMLHLIPGKPKEN 418
++LDG F GR++H++P K+
Sbjct: 360 KNLDGKHFQGRLMHILPAAAKKT 382
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 143/367 (38%), Gaps = 76/367 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N SY V D+L K+FE +G + +++P + A+V F P+ A +A++ L
Sbjct: 486 ILVKNFSYGVKTDELRKMFEPFGQITRLLMP------PSGTIAIVEFSRPDEAQKAFKGL 539
Query: 399 ------DGTVFLGRM-LHLIPGKPKENEGNVDGK-VHCCISERKLDAFNQVVEARSKRII 450
D +FL + L + ++ K V S A ++V + +
Sbjct: 540 AYRKLGDSILFLEKAPKDLFDAAAVPQKATIETKAVSQGFSTADTFAADEVDDLTPTTTL 599
Query: 451 LVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLVEFLQKNQA 496
VKNL + T LF P G+ L + G VEF K QA
Sbjct: 600 FVKNLNFATTTQSFVDLFRPLDGFVSAKIKTKPDPKHPGQTLSMGF---GFVEFRSKAQA 656
Query: 497 KAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEE 556
++A ++ K + L + + G+ A EE ++E+TA++
Sbjct: 657 QSALAAMNGYKLDQHELVVRVSHRGMDA--------------------AEERRREDTAKK 696
Query: 557 DNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK 616
+ T + IKNL F +T+ +R F G + SV V +K
Sbjct: 697 VAAR-------------------RTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKF 737
Query: 617 DPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK 676
D + G+GF F + A+ L+N+ L ++ L+ +N +K+
Sbjct: 738 DRS------ARGFGFADFVSAREAENAMDALKNTHLLGRKLVLEFANEEAIDAEEEIKQI 791
Query: 677 SSNVAKQ 683
V +Q
Sbjct: 792 EKKVGEQ 798
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 122/313 (38%), Gaps = 42/313 (13%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGM------AYIGFKDEKNCNKALNKNKS 280
I+VKN GVK +L+ F+P + T L M A + F KA K +
Sbjct: 486 ILVKNFSYGVKTDELRKMFEPFG----QITRLLMPPSGTIAIVEFSRPDEAQKAF-KGLA 540
Query: 281 FWK--GKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE--DIAES 336
+ K L + K KD AA A++E S D+ E D+ +
Sbjct: 541 YRKLGDSILFLEKAPKD----LFDAAAVPQKATIETKAVSQGFSTADTFAADEVDDLTPT 596
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL---PIDKETDKT--KGFALVTFLMPEHA 391
+FV+NL++ T LF + P K +T GF V F A
Sbjct: 597 TTLFVKNLNFATTTQSFVDLFRPLDGFVSAKIKTKPDPKHPGQTLSMGFGFVEFRSKAQA 656
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
A ++G L + V + ER+ + + V AR +II
Sbjct: 657 QSALAAMNGYKLDQHELVV----------RVSHRGMDAAEERRREDTAKKVAARRTKII- 705
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAY 505
+KNLP++ D+++LF +G L V VP G G +F+ +A+ A ++L
Sbjct: 706 IKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGF-GFADFVSAREAENAMDALKN 764
Query: 506 TKFKEVPLYLEWA 518
T L LE+A
Sbjct: 765 THLLGRKLVLEFA 777
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 77/199 (38%), Gaps = 36/199 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-------------PLASVRTTFLGMAYIGFKDEKNCN 272
T+ VKNL + F+PL P +T +G ++ F+ +
Sbjct: 598 TLFVKNLNFATTTQSFVDLFRPLDGFVSAKIKTKPDPKHPGQTLSMGFGFVEFRSKAQAQ 657
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
AL +N YK + S + A + +ED+ + +
Sbjct: 658 SAL---------AAMNGYKLDQHELVV---------RVSHRGMDAAEERRREDTAK--KV 697
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
A +I ++NL + T+ D+ LF YG L V +P K+ D++ +GF F+ A
Sbjct: 698 AARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP--KKFDRSARGFGFADFVSAREA 755
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A L T LGR L L
Sbjct: 756 ENAMDALKNTHLLGRKLVL 774
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
++ +QL+ F + VTD + RR F+G+ + AQ A+ YFN TY+ S+I
Sbjct: 15 LSDDQLRKHFATRFQVTDAHVLPK-----RRIGFVGFKNHEAAQQAVSYFNKTYMKMSKI 69
Query: 89 KVE 91
V+
Sbjct: 70 SVD 72
>gi|359472780|ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
Length = 983
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 202/346 (58%), Gaps = 39/346 (11%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS I+LVKNLPY + +L +F +G L ++++PP LV FL+ +A+AAF LA
Sbjct: 638 RSNHILLVKNLPYGSSEGELAKMFGKYGSLDKIILPPTKTLALVVFLEPAEARAAFRGLA 697
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y ++K+ PLYLEWAP + ++ E + + E D ++ +
Sbjct: 698 YKRYKDAPLYLEWAPGNILSQNAPY--------------ENDASRSVIVGERDVKRML-- 741
Query: 565 VEENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKKD 617
+E+ VE + + +PD +L++KNLNF ++ +S+R+HF K G I SV V K+
Sbjct: 742 LEQQVEGISDVDIDPDRVESRSLFVKNLNFKTSGESLRKHFSEHMKEGKIRSVRV---KE 798
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQ--IELKRSNRNLESEATTVKR 675
G+ +SMG+GF++F + E+ LQ + LD H ++L R+ ++ + K
Sbjct: 799 HLKNGKNVSMGFGFIEFDSVETAVNVCSNLQGTVLDGHALILQLCRAKKDEQVLKKVDKD 858
Query: 676 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
KSS +K++VRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVEF
Sbjct: 859 KSS-------TKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEF 908
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+TK EA+ A++AL STHLYGR LV+E A+E +++E++R RT F
Sbjct: 909 VTKQEAQNALQALS-STHLYGRHLVMERAKEGESLEELRARTAAQF 953
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 65/87 (74%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
+D+ E+GR+FVRNL YT TED+L +LF K+G +++V L ++K+T ++KG A V F +PE
Sbjct: 438 GKDVLETGRLFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPE 497
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPK 416
A +A + LD ++F GR+LH++P + K
Sbjct: 498 SAVRALEELDNSIFQGRLLHVMPAREK 524
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 55/223 (24%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++L+ F +KG +TD +L T EGK R+FAFIG+ E +A+ AL +FNN+Y+ + RI
Sbjct: 130 VAEDRLRDHFSQKGEITDAKLMRTKEGKSRQFAFIGFRTEQEAEEALKFFNNSYLDTCRI 189
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDS----KPGKKSK-- 142
E +GD P+ WS+Y+ K + + + + K TK+S G+KSK
Sbjct: 190 TCEIARKVGDPDIPRPWSRYSL------KKEDKSTEVEKKDRGTKNSSHVGSKGEKSKKG 243
Query: 143 ---NDPTFSDFLQL-----------------------------------HGKDVSKLLPL 164
+DP +FLQ+ G+D + +
Sbjct: 244 SENDDPQLQEFLQVMQPRVKSKMWANDTLGVPPLDHNGKNSDKQTQSMREGRDEAVQMQA 303
Query: 165 SNKDGEEKEEENEDESN----NQIAHAD-ISDMEYLKLKTKSK 202
+ +E+E+E D N +AH + ISDM+Y K + K K
Sbjct: 304 DLDESDEREDELSDSQMDTKPNNLAHDEVISDMDYFKSRVKKK 346
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 133/333 (39%), Gaps = 62/333 (18%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYF--------------KPLPL------ASVRTTFLGM 260
KR H ++VKNLP G + +L F K L L A R F G+
Sbjct: 637 KRSNHILLVKNLPYGSSEGELAKMFGKYGSLDKIILPPTKTLALVVFLEPAEARAAFRGL 696
Query: 261 AYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHW 320
AY +KD + + NI +A Y A + ++K
Sbjct: 697 AYKRYKDAP----------LYLEWAPGNILS----QNAPYENDASRSVIVGERDVKRMLL 742
Query: 321 KSQEDSVQFAE---DIAESGRIFVRNLSYTVTEDDLTKLFEKY---GPLAEVILP--IDK 372
+ Q + + + D ES +FV+NL++ + + L K F ++ G + V + +
Sbjct: 743 EQQVEGISDVDIDPDRVESRSLFVKNLNFKTSGESLRKHFSEHMKEGKIRSVRVKEHLKN 802
Query: 373 ETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISE 432
+ + GF + F E A +L GTV G L L C ++
Sbjct: 803 GKNVSMGFGFIEFDSVETAVNVCSNLQGTVLDGHALIL----------------QLCRAK 846
Query: 433 RKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT---GLV 488
+ +V + +S ++V+N+ + DL+ LF PFG + + +P +G V
Sbjct: 847 KDEQVLKKVDKDKSSTKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFV 906
Query: 489 EFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEG 521
EF+ K +A+ A +L+ T L +E A EG
Sbjct: 907 EFVTKQEAQNALQALSSTHLYGRHLVMERAKEG 939
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ VRN+++ TE DL +LF +G + + LP+ + +GFA V F+ + A A
Sbjct: 861 STKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLPM--KFGSHRGFAFVEFVTKQEAQNAL 918
Query: 396 QHLDGTVFLGRMLHLIPGKPKENE 419
Q L T GR HL+ + KE E
Sbjct: 919 QALSSTHLYGR--HLVMERAKEGE 940
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+ + +KNL ED +R HF + G I + R K+ K S + F+ F T +
Sbjct: 119 SRICVKNLPKYVAEDRLRDHFSQKGEITDAKLMRTKEGK------SRQFAFIGFRTEQEA 172
Query: 641 NQALKVLQNSSLDEHQI 657
+ALK NS LD +I
Sbjct: 173 EEALKFFNNSYLDTCRI 189
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR--GFGFVEFITKNE 740
+TG ++ VRN+P+ A + E+EELF FG + V L +V R G +V F
Sbjct: 443 ETG-RLFVRNLPYTATEDELEELFSKFGNVSQVHL---VVNKDTKRSKGIAYVLFTLPES 498
Query: 741 AKRAMKALCQSTHLYGRRL 759
A RA++ L S GR L
Sbjct: 499 AVRALEELDNSI-FQGRLL 516
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+++NL + +TED + F K G ++ V + KD K S G +V F ES +
Sbjct: 447 LFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKR-----SKGIAYVLFTLPESAVR 501
Query: 643 ALKVLQNS 650
AL+ L NS
Sbjct: 502 ALEELDNS 509
>gi|367018676|ref|XP_003658623.1| hypothetical protein MYCTH_2294614 [Myceliophthora thermophila ATCC
42464]
gi|347005890|gb|AEO53378.1| hypothetical protein MYCTH_2294614 [Myceliophthora thermophila ATCC
42464]
Length = 831
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/356 (37%), Positives = 203/356 (57%), Gaps = 40/356 (11%)
Query: 423 DGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY 482
+ K H ++AF + R ILVKN+ ++ +L+ LFE G + RVL+PP
Sbjct: 467 EAKAHFAAHGVNIEAFKS--QQRGDTAILVKNIKNASI-EELRNLFEEHGSVVRVLMPPS 523
Query: 483 GITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEG 542
G +V+F Q +AAF AY++FK+ L+LE AP+G+F + N
Sbjct: 524 GTIAIVQFGQPAACRAAFAKKAYSRFKDSVLFLEKAPKGLFVD------------NAAPP 571
Query: 543 EEGEEEKKENTAEEDNQQGV--PEVEENVE--EDEEREPEPDTTLYIKNLNFNSTEDSIR 598
+E +D GV P V + +E +DE+++ E T+LY++NLNF++T + +
Sbjct: 572 QE----------PQDRPAGVQKPSVADLLERHDDEDQQLE-TTSLYVRNLNFSTTAEGLT 620
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
FK S TV KKDPK PGQ LSMG+GF F T+E ALKV+ LD H++
Sbjct: 621 NAFKHLDGFVSATVKTKKDPKRPGQVLSMGFGFCAFRTKEQAQAALKVMDGYVLDAHKLS 680
Query: 659 LKRSNRNLESEATTVKRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFV 715
+K S+R ++ +R+ ++AK+ +KI+++N+PF+A + +V LF A+G+L +
Sbjct: 681 VKASHRGHDA---AEERRREDLAKKAAAQRTKIVIKNLPFEATKKDVRALFSAYGKLVAL 737
Query: 716 RLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVE 771
RLPKK + + RGF F EF T EA A+ AL + THL GRRLVL++A EAD V+
Sbjct: 738 RLPKKF--NSMSRGFAFAEFATAKEALNALTAL-KDTHLLGRRLVLDFA-EADEVD 789
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
ED+ + I ++ R+F+RNLSYTVTEDD+ + F K+G L EV LP+D + KGFA++
Sbjct: 296 EDTEDAIKQIEKTRRLFLRNLSYTVTEDDIQEHFSKFGALEEVNLPLDSRG-QGKGFAMI 354
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
+ P A A+Q DG++F GR++H+IPG K
Sbjct: 355 RYEQPAAAVAAFQ-TDGSIFQGRIIHIIPGSAK 386
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 18/180 (10%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPE 389
E+ ++VRNL+++ T + LT F+ + K+ + + GF F E
Sbjct: 601 ETTSLYVRNLNFSTTAEGLTNAFKHLDGFVSATVKTKKDPKRPGQVLSMGFGFCAFRTKE 660
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A A + +DG V L + + H ER+ + + A+ +I
Sbjct: 661 QAQAALKVMDGYVLDAHKLSV----------KASHRGHDAAEERRREDLAKKAAAQRTKI 710
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY--GITGLVEFLQKNQAKAAFNSLAYTK 507
+ +KNLP+ D++ALF +G L + +P ++ F + AK A N+L K
Sbjct: 711 V-IKNLPFEATKKDVRALFSAYGKLVALRLPKKFNSMSRGFAFAEFATAKEALNALTALK 769
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 21/153 (13%)
Query: 258 LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
+G + F+ ++ AL G L+ +K S S + AA++
Sbjct: 649 MGFGFCAFRTKEQAQAALK----VMDGYVLDAHKLSVKASHRGHDAAEE----------- 693
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
+ +ED + A A+ +I ++NL + T+ D+ LF YG L + LP K +
Sbjct: 694 ---RRREDLAKKA--AAQRTKIVIKNLPFEATKKDVRALFSAYGKLVALRLP-KKFNSMS 747
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+GFA F + A A L T LGR L L
Sbjct: 748 RGFAFAEFATAKEALNALTALKDTHLLGRRLVL 780
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
I++ + + F +G VTDV+L RR F+GY + A A+ YFN T++ SR
Sbjct: 15 ISEAEFRNHFSAQGREVTDVKLFSN-----RRIGFVGYKSHEDAAKAVKYFNKTFIRLSR 69
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQD-LKPEHTKDSKPGKKSKN--- 143
I V+ + D +KPK + A D + + K D + T D K K+ +
Sbjct: 70 ISVDLAKPIAD-SKPKLPA--AKDEQRHDGAGISSRKLDGTGVDQTDDEKSKKRKREALE 126
Query: 144 --DPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADI----SDMEYLKL 197
DP ++L++ G V K +D E E +S + A I SD EY +
Sbjct: 127 EADPKLQEYLEVMGHPVKK-----PRDREVVGTGQEADSVAAVPPAVIEAGESDDEYEDI 181
Query: 198 KT-KSKDTAPSDPSVPPVSKAPV 219
+ K K DP+ PV AP
Sbjct: 182 PSLKPKGGPKGDPA--PVEAAPT 202
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 134/343 (39%), Gaps = 90/343 (26%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH-----ATQ 393
I V+N+ E+ L LFE++G + V++P + A+V F P A +
Sbjct: 492 ILVKNIKNASIEE-LRNLFEEHGSVVRVLMP------PSGTIAIVQFGQPAACRAAFAKK 544
Query: 394 AYQHL-DGTVFLGRMLHLI-------PGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
AY D +FL + + P +P++ V + ER D +Q +E
Sbjct: 545 AYSRFKDSVLFLEKAPKGLFVDNAAPPQEPQDRPAGVQKPSVADLLERHDDE-DQQLETT 603
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLVEFL 491
S + V+NL + T L F+ G+VL +G F
Sbjct: 604 S---LYVRNLNFSTTAEGLTNAFKHLDGFVSATVKTKKDPKRPGQVLSMGFGFCA---FR 657
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEE-GEEEKK 550
K QA+AA + +G +A + S K G + EE ++
Sbjct: 658 TKEQAQAALKVM----------------DGYVLDAHKLSV-----KASHRGHDAAEERRR 696
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
E+ A++ Q T + IKNL F +T+ +R F G + ++
Sbjct: 697 EDLAKKAAAQ-------------------RTKIVIKNLPFEATKKDVRALFSAYGKLVAL 737
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYT-RESLNQALKVLQNSSL 652
+ +K + +S G+ F +F T +E+LN AL L+++ L
Sbjct: 738 RLPKKFNS------MSRGFAFAEFATAKEALN-ALTALKDTHL 773
>gi|328852591|gb|EGG01736.1| hypothetical protein MELLADRAFT_23270 [Melampsora larici-populina
98AG31]
Length = 510
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 189/348 (54%), Gaps = 33/348 (9%)
Query: 436 DAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQ 495
+AF+Q+ RS +LVKN+PY T L+++F P G++ R+L+PP G LVE
Sbjct: 188 EAFSQIKNGRSSTTLLVKNIPYGTTSQVLRSMFTPHGEVSRILIPPSGTIALVEMHNAED 247
Query: 496 AKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAE 555
K+AF SLAY + LYLE AP+G++ + K TA
Sbjct: 248 TKSAFKSLAYKRVGNSVLYLERAPDGIW--------------------KPNAPKPSATAF 287
Query: 556 EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARK 615
+ VP + V DE EP +TL++KN+++++T + F + K
Sbjct: 288 DGIISSVPPAQPKVSIDEG---EPGSTLFVKNISYSTTSEGFSSSFSTFPDFLFARLQTK 344
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR 675
DPK+P LSMG+GFV F T + +K Q LD H +E+K +NR E E R
Sbjct: 345 PDPKNPKNRLSMGFGFVGFKTVSAAQHVIKAAQGYRLDAHALEIKFANRGKEEEEKD-SR 403
Query: 676 KSSNVAKQ-----TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
+ K+ + +K+LV+N+PF+ + E+ ELF +FG+LK VRLPKK+ RGF
Sbjct: 404 NGGIITKESNDGISSTKLLVKNVPFETSKQELRELFGSFGKLKSVRLPKKL--DRKTRGF 461
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD-NVEDIRKRT 777
GF+E+ TK EA+ AMK+L + THL GR LV+ +A + D ++E +R ++
Sbjct: 462 GFIEYTTKKEAEEAMKSL-KHTHLLGRHLVISYANDKDEDIEQLRAKS 508
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I ++GR+F+RNL +++ E+DL LF YG +++V +P+++E K KG A V+F A
Sbjct: 12 ILQTGRLFLRNLPFSLLEEDLMSLFSTYGAVSQVHIPLNRER-KQKGVAYVSFERSSDAL 70
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPK----ENEGNVDGK 425
+A++ LD F GR+LH++P + ENE GK
Sbjct: 71 EAFKQLDQRDFQGRLLHILPAVTRNARPENESGRAGK 107
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 118/317 (37%), Gaps = 39/317 (12%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSF 281
R T++VKN+P G + L++ F P S R I + N + KS
Sbjct: 197 RSSTTLLVKNIPYGTTSQVLRSMFTPHGEVS-RILIPPSGTIALVEMHNAEDTKSAFKSL 255
Query: 282 WKGKQLNIYKYS--------KDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI 333
+ N Y K N+ K S A D +S+ + K + D
Sbjct: 256 AYKRVGNSVLYLERAPDGIWKPNAPKPSATAFDGIISSVPPAQPK----------VSIDE 305
Query: 334 AESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKETDKTKGFALVTFLM 387
E G +FV+N+SY+ T + + F + L P + + + GF V F
Sbjct: 306 GEPGSTLFVKNISYSTTSEGFSSSFSTFPDFLFARLQTKPDPKNPKNRLSMGFGFVGFKT 365
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSK 447
A + G L + + E D + I++ D S
Sbjct: 366 VSAAQHVIKAAQGYRLDAHALEIKFANRGKEEEEKDSRNGGIITKESNDGI-------SS 418
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFN 501
+LVKN+P+ T +L+ LF FG L V +P G G +E+ K +A+ A
Sbjct: 419 TKLLVKNVPFETSKQELRELFGSFGKLKSVRLPKKLDRKTRGF-GFIEYTTKKEAEEAMK 477
Query: 502 SLAYTKFKEVPLYLEWA 518
SL +T L + +A
Sbjct: 478 SLKHTHLLGRHLVISYA 494
>gi|310790005|gb|EFQ25538.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 846
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 188/334 (56%), Gaps = 32/334 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF + R ILVKN P+ T +L+ +FE G + RVL+PP G +VEF Q
Sbjct: 489 LDAFKS--QKRGDTTILVKNFPFGTTMEELRTMFEEHGTVLRVLMPPSGTIAIVEFAQPA 546
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
AKAAF LAY + K+ L+LE P+G+F KN+ + +
Sbjct: 547 HAKAAFAKLAYRRIKDTVLFLEKGPKGLF-------------KNDASIDMTQ-------G 586
Query: 555 EEDNQQGVPE--VEENVEEDEEREPEPDTT-LYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
+ED GV + V E + DE+ E + +TT L+++NLNF++T + + FK S
Sbjct: 587 KEDRPTGVQKLSVTELLGRDEQGEADIETTSLFVRNLNFSTTTEKLAETFKPLDGFVSAR 646
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
V K DPK PGQ LSMG+GFV F T+E ALK + L+ H + +K S++ +A
Sbjct: 647 VKTKMDPKKPGQVLSMGFGFVIFKTKEQAQAALKTMDGFVLEGHTLAVKGSHKG--QDAA 704
Query: 672 TVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
+R+ K G +KI+++N+PF+A + ++ LF +G+L+ VRLPKK S RG
Sbjct: 705 EERRREDKARKAAGQRTKIVIKNLPFEATKKDIRTLFGTYGQLRAVRLPKKFGNS--TRG 762
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
F F EF+T EA+ A+ AL + THL GRRLVL++
Sbjct: 763 FAFAEFVTPREAENALNAL-RDTHLLGRRLVLDY 795
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 178/410 (43%), Gaps = 40/410 (9%)
Query: 28 KITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
KIT+ + F G VTDV++ RR ++GY + A A+ YFN +Y+ S
Sbjct: 14 KITEADFRQHFSAGGREVTDVKVIPQ-----RRIGYVGYKTPEVAAKAVKYFNKSYIRMS 68
Query: 87 RIKVEKCSNLGDTT--KPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKND 144
RI VE + D K + + P ++ + P + K K ++D
Sbjct: 69 RINVELARPIADPVLQHTKGATIHVPLATPSHSAA-LTPPGAEDKDVKKKRKREDLDESD 127
Query: 145 PTFSDFLQLHG------KDVSKLL-PLSNKDGEE--KEEENEDESNNQIAHADISDM-EY 194
P +FLQ+ G DV +L P++ K+ ++ ++ E++DE + + M E
Sbjct: 128 PKLREFLQVMGPSKNAANDVPDVLDPVAAKEQKKLLQDGESDDEYEAIPSRPEKRQMREV 187
Query: 195 LKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVR 254
K + +S T D +P APV + A +A P + +
Sbjct: 188 PKGEQRSMPTPEKDEVMP--DAAPVPE------------AAEDAPQEQASVPPTNVVTTD 233
Query: 255 TTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDN----SAKYSGAADDNNNA 310
+L D + ++ L +G+ L + + + + D + A
Sbjct: 234 DDWLRSRTNRLLDLVDDDEVLQPPAQQTEGEPLGCAPAEQQKQPAKATELPTSGDAKSGA 293
Query: 311 SMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPI 370
+ E+ A K ED+ A I + R+FVRNL ++ EDDL F +YG L EV LP+
Sbjct: 294 AAEDAPAPSSKV-EDNDTLAT-IKRNARLFVRNLPFSTNEDDLQTHFGQYGELQEVHLPV 351
Query: 371 DKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
+KGFA+V F+ E A A+Q DG F GR+LH++P + K + G
Sbjct: 352 -TAAGASKGFAMVQFMSGESAVAAFQSTDGQTFQGRLLHVLPAEGKRDAG 400
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 135/320 (42%), Gaps = 41/320 (12%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKP--LPLASVRTTFLGMAYIGFKDEKNCNKALNK 277
KR TI+VKN P G ++L+ F+ L + +A + F + A K
Sbjct: 495 QKRGDTTILVKNFPFGTTMEELRTMFEEHGTVLRVLMPPSGTIAIVEFAQPAHAKAAFAK 554
Query: 278 NKSFWKGKQLNIYK-------YSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA 330
++ + K ++ + D S + +D ++ + +++ Q
Sbjct: 555 -LAYRRIKDTVLFLEKGPKGLFKNDASIDMTQGKEDRPTG-VQKLSVTELLGRDE--QGE 610
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL-----AEVILPIDKETDK---TKGFAL 382
DI E+ +FVRNL+++ T + KL E + PL A V +D + + GF
Sbjct: 611 ADI-ETTSLFVRNLNFSTTTE---KLAETFKPLDGFVSARVKTKMDPKKPGQVLSMGFGF 666
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
V F E A A + +DG V G L + +G+ G+ R+ D +
Sbjct: 667 VIFKTKEQAQAALKTMDGFVLEGHTLAV--------KGSHKGQ-DAAEERRREDKARKAA 717
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT----GLVEFLQKNQAK 497
R+K I++KNLP+ D++ LF +G L V +P +G + EF+ +A+
Sbjct: 718 GQRTK--IVIKNLPFEATKKDIRTLFGTYGQLRAVRLPKKFGNSTRGFAFAEFVTPREAE 775
Query: 498 AAFNSLAYTKFKEVPLYLEW 517
A N+L T L L++
Sbjct: 776 NALNALRDTHLLGRRLVLDY 795
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 131/343 (38%), Gaps = 87/343 (25%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N + T ++L +FE++G + V++P + A+V F P HA A+ L
Sbjct: 502 ILVKNFPFGTTMEELRTMFEEHGTVLRVLMP------PSGTIAIVEFAQPAHAKAAFAKL 555
Query: 399 DGTVFLGRMLHLIPGKPK---ENEGNVD---GKVHCCISERKLDAFNQV---------VE 443
+L L G PK +N+ ++D GK +KL + +E
Sbjct: 556 AYRRIKDTVLFLEKG-PKGLFKNDASIDMTQGKEDRPTGVQKLSVTELLGRDEQGEADIE 614
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLVE 489
S + V+NL + T L F+P G+VL + G V
Sbjct: 615 TTS---LFVRNLNFSTTTEKLAETFKPLDGFVSARVKTKMDPKKPGQVLSMGF---GFVI 668
Query: 490 FLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEK 549
F K QA+AA ++ + EG K KG++ EE +
Sbjct: 669 FKTKEQAQAALKTMDG-----------FVLEGHTLAVKGSHKGQDA---------AEERR 708
Query: 550 KENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIAS 609
+E+ A + Q T + IKNL F +T+ IR F G + +
Sbjct: 709 REDKARKAAGQ-------------------RTKIVIKNLPFEATKKDIRTLFGTYGQLRA 749
Query: 610 VTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
V + PK G + G+ F +F T AL L+++ L
Sbjct: 750 VRL-----PKKFGNS-TRGFAFAEFVTPREAENALNALRDTHL 786
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+++ VRN+PF + +++ F +GEL+ V LP + +G +GF V+F++ A A
Sbjct: 318 ARLFVRNLPFSTNEDDLQTHFGQYGELQEVHLP--VTAAGASKGFAMVQFMSGESAVAAF 375
Query: 746 KALCQSTHLYGRRLVLEWAE 765
++ T GR L + AE
Sbjct: 376 QSTDGQT-FQGRLLHVLPAE 394
>gi|388582417|gb|EIM22722.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 725
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 210/793 (26%), Positives = 353/793 (44%), Gaps = 162/793 (20%)
Query: 34 LKAKFEEKG-TVTDVQLKY-------TTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
L+ F +G T+TD ++ + T++GK R F F+G+ ++A+ AL +FN TY +
Sbjct: 18 LRTHFGSRGATITDAKVVFKKGTAVGTSKGKSRGFGFVGFKSPEEAKEALHFFNKTYWGT 77
Query: 86 SRIKVEKCSNL---------GDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSK 136
S++++E + G K K K +S + ++ N K LKP H K +
Sbjct: 78 SKLEIEIVEDNKSIQEQLQDGKALKAKRRRKEGKESDSEEEESNKRVKV-LKPVHLK-AI 135
Query: 137 PGKKSKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLK 196
+K+KN T K+ + ++E +D + ++SD+EY++
Sbjct: 136 EMQKAKNKAT--------------------KNSDSEQEGGDDNT-------EMSDLEYMR 168
Query: 197 LKTKSK------DTAPSDPSVPPVSKAPVHKRQYHT---------IVVKNLPAGVKKKDL 241
K K + D AP + + ++ ++Q I ++NLP + DL
Sbjct: 169 AKMKRRHIPEETDEAPKEETPQETTQDAEARKQAEVIDQVMETARIFLRNLPFSCTEDDL 228
Query: 242 KAYFKP--------LPLASVRTTFLGMAYIGFKD-EKNCNKALNKNKSFWKGKQLNIYKY 292
K F +PL++ T +G+AYI F + S ++G+ L++
Sbjct: 229 KTEFSKYGVVNQAHVPLSNDSKTPMGVAYISFASPNAAVAAFRAADGSIFQGRLLHVL-- 286
Query: 293 SKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA-EDIAESGRIFVRNLS--YTVT 349
A D + AS + ++ K K +S +F+ + + V +L+ V
Sbjct: 287 ----PAVNKRPPQDLSKASFKKLRNKDRKEGAESREFSWSGLYMNADAVVSSLAARLNVE 342
Query: 350 EDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLH 409
+ ++ P +V L ++TKGF
Sbjct: 343 KAEILSSDSSSNPAVKVALAETHVINETKGFL---------------------------- 374
Query: 410 LIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI---ILVKNLPYRTLPTDLKA 466
KE N+D AF+ E R R+ +L+KN+P+ T DL
Sbjct: 375 ------KEQGVNLD-------------AFSP--ENRGPRLENTLLIKNIPFGTSVDDLDE 413
Query: 467 LFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEA 526
+F P G++ R+L+PP G ++E+L N A+ AF LAY + LYLE AP G++A
Sbjct: 414 MFRPCGEISRLLLPPAGTIAIIEYLLPNDARTAFKKLAYKRVGNSVLYLEKAPNGMWA-- 471
Query: 527 KEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIK 586
K+ G + E +E V EE E +TL+IK
Sbjct: 472 --------KDAPSGAIAAGGPKPVEVVDKETPTDKVAAGEE----------EAASTLFIK 513
Query: 587 NLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKV 646
N+ F++ E + F + K DPKS LSMGYGFV F E AL
Sbjct: 514 NIAFSTPEAKLASIFSSLSGYRYARIQTKPDPKSAANRLSMGYGFVGFDNEEHAKDALAS 573
Query: 647 LQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELF 706
+Q LD H +++K + R +SE + + + +K+LV+N+PF+A + ++ ELF
Sbjct: 574 MQKYVLDGHSLQVKFAQRGKDSEP------GAAMGQTKTTKMLVKNVPFEASKKDIRELF 627
Query: 707 KAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
G+LK VRLP+K RGF F++F+T+ +A+ A ++L + THL GR LVL+WA++
Sbjct: 628 GMHGQLKSVRLPRKF--DRKTRGFAFLDFVTRRDAEIAYESL-KHTHLLGRHLVLQWADD 684
Query: 767 A--DNVEDIRKRT 777
A ++++ +R++T
Sbjct: 685 AAINDIDALREKT 697
>gi|115388597|ref|XP_001211804.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
gi|114195888|gb|EAU37588.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
Length = 812
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 187/335 (55%), Gaps = 31/335 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF Q R ILVKN + DL+ LFEP+G L R+L+PP G +VEF + +
Sbjct: 461 LDAFKQ--RERGNTAILVKNFSFGVKTEDLRKLFEPYGQLTRLLMPPSGTIAIVEFARPD 518
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY K + L+LE AP+ +F K + K +G +TA
Sbjct: 519 EAQKAFRGLAYRKLGDSILFLEKAPKNLFDSTTAPQKPVVEPKAISQGF--------STA 570
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
E DE E P TL++KNLNFN+T + F+ S +
Sbjct: 571 E------------TFAADEAEELGPTATLFVKNLNFNTTNERFVDVFRPLDGFVSAKLKT 618
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GFV F T+ AL + LD+H++ ++ S++ +++ +
Sbjct: 619 KPDPKRPGQTLSMGFGFVDFRTKAQAQAALAAMNGYKLDQHELVVRASHKGMDAAE---E 675
Query: 675 RKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGFG
Sbjct: 676 RRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGFG 733
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
F +F++ EA+ AM AL ++THL GRRLVLE+A E
Sbjct: 734 FADFVSAREAENAMDAL-KNTHLLGRRLVLEFANE 767
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E+I S R+FVRNL Y TE DL +F +G + E+ + D +KGFA + ++ P+
Sbjct: 283 ENIRLSARLFVRNLPYDTTEADLEPVFGPFGRVEEIHVAFDTRVSSSKGFAYIQYVDPDA 342
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A +AY+ LDG F GR++H++P K
Sbjct: 343 AVEAYKALDGKNFQGRLMHILPATAK 368
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 150/372 (40%), Gaps = 80/372 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N S+ V +DL KLFE YG L +++P + A+V F P+ A +A++ L
Sbjct: 474 ILVKNFSFGVKTEDLRKLFEPYGQLTRLLMP------PSGTIAIVEFARPDEAQKAFRGL 527
Query: 399 ------DGTVFLGRML-HLIPGKPKENEGNVDGK-VHCCISERKLDAFNQVVEARSKRII 450
D +FL + +L + V+ K + S + A ++ E +
Sbjct: 528 AYRKLGDSILFLEKAPKNLFDSTTAPQKPVVEPKAISQGFSTAETFAADEAEELGPTATL 587
Query: 451 LVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLVEFLQKNQA 496
VKNL + T +F P G+ L + G V+F K QA
Sbjct: 588 FVKNLNFNTTNERFVDVFRPLDGFVSAKLKTKPDPKRPGQTLSMGF---GFVDFRTKAQA 644
Query: 497 KAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEE 556
+AA ++ K + L + + +G+ A EE ++E+TA++
Sbjct: 645 QAALAAMNGYKLDQHELVVRASHKGMDA--------------------AEERRREDTAKK 684
Query: 557 DNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK 616
+ T + IKNL F +T+ +R F G + SV V +K
Sbjct: 685 IAAR-------------------RTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKF 725
Query: 617 DPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK 676
D + G+GF F + A+ L+N+ L ++ L+ +N EA +++
Sbjct: 726 DRS------ARGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFAN----EEAIDPEQE 775
Query: 677 SSNVAKQTGSKI 688
+ K+ G ++
Sbjct: 776 IQQIEKKVGEQL 787
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 125/314 (39%), Gaps = 26/314 (8%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKALNK 277
+R I+VKN GVK +DL+ F+P L + G +A + F KA +
Sbjct: 467 RERGNTAILVKNFSFGVKTEDLRKLFEPYGQLTRLLMPPSGTIAIVEFARPDEAQKAF-R 525
Query: 278 NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG 337
++ K ++ + S A + I ++ + AE++ +
Sbjct: 526 GLAYRKLGDSILFLEKAPKNLFDSTTAPQKPVVEPKAISQGFSTAETFAADEAEELGPTA 585
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL---PIDKETDKT--KGFALVTFLMPEHAT 392
+FV+NL++ T + +F L P K +T GF V F A
Sbjct: 586 TLFVKNLNFNTTNERFVDVFRPLDGFVSAKLKTKPDPKRPGQTLSMGFGFVDFRTKAQAQ 645
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
A ++G L + + + +D R+ D ++ R+K I++
Sbjct: 646 AALAAMNGYKLDQHELVV-----RASHKGMD----AAEERRREDTAKKIAARRTK--III 694
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAYT 506
KNLP++ D+++LF +G L V VP G G +F+ +A+ A ++L T
Sbjct: 695 KNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGF-GFADFVSAREAENAMDALKNT 753
Query: 507 KFKEVPLYLEWAPE 520
L LE+A E
Sbjct: 754 HLLGRRLVLEFANE 767
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +QL+ F + VTD + RR F+G+ + A+ A+ YFN TY+ S+I
Sbjct: 15 FSNDQLRKHFSTRFQVTDAHVLPK-----RRIGFVGFKSPEAAKEAVAYFNKTYIKLSKI 69
Query: 89 KVEKCSNLGDTTKPKSWSKYA-PDSSAYQKL 118
V+ + +PK K + PD + L
Sbjct: 70 SVDIAKPVDSEPEPKKRRKESVPDEPSTNTL 100
>gi|389632927|ref|XP_003714116.1| multiple RNA-binding domain-containing protein 1, partial
[Magnaporthe oryzae 70-15]
gi|351646449|gb|EHA54309.1| multiple RNA-binding domain-containing protein 1, partial
[Magnaporthe oryzae 70-15]
Length = 867
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 182/331 (54%), Gaps = 33/331 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF + R ILVKN + T +LK FE +G L RVL+PP +V+F
Sbjct: 518 LDAFRH--KERGDTTILVKNFSHGTTLDELKKTFEEYGPLTRVLMPPSATIAIVQFSHAA 575
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
AK AF LAY+KFK LYLE AP+ VF E TA
Sbjct: 576 HAKTAFKKLAYSKFKSSLLYLEMAPKDVFKNVPEP-----------------------TA 612
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+E +Q + V E +E D+ E T+L++K LNF +T + + F+ S V
Sbjct: 613 QEQGKQKL-SVTELLERDDAEEQGETTSLFVKGLNFATTTEKLAETFQSLEGFVSARVKT 671
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GFV+F ++E ALKV+ N +L+ H + ++ S+R L +A +
Sbjct: 672 KTDPKKPGQVLSMGFGFVEFRSKELAQAALKVMDNYNLEGHTLTVRASHRGL--DAAEER 729
Query: 675 RKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
R+ KQ G +KI+V+N+PF+A + +V LF +G+L+ VR+PK RGF F
Sbjct: 730 RREDKAKKQAGQRTKIVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNF--ENRTRGFAF 787
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
EF T EA+ A+ AL ++THL GR+LVL++
Sbjct: 788 AEFTTPKEAENALNAL-KNTHLLGRKLVLDF 817
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I ++ R+FVRNL Y+ TEDDL +F +GPL E+ L +KG A + +
Sbjct: 342 ESIRKTSRLFVRNLPYSATEDDLKSVFGAFGPLDEIHLSHAGREGTSKGIAFIQYSESSS 401
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A A+Q LDG F GR+LH++PG+ K
Sbjct: 402 AVDAFQKLDGCDFQGRILHVLPGQAK 427
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 129/335 (38%), Gaps = 78/335 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N S+ T D+L K FE+YGPL V++P + A+V F HA A++ L
Sbjct: 531 ILVKNFSHGTTLDELKKTFEEYGPLTRVLMP------PSATIAIVQFSHAAHAKTAFKKL 584
Query: 399 DGTVFLGRMLHLIPGKPKENEGNV-------DGKVHCCISERKLDAFNQVVEARSKRIIL 451
+ F +L+L PK+ NV GK ++E L + E +
Sbjct: 585 AYSKFKSSLLYL-EMAPKDVFKNVPEPTAQEQGKQKLSVTE--LLERDDAEEQGETTSLF 641
Query: 452 VKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLVEFLQKNQAK 497
VK L + T L F+ G+VL + G VEF K A+
Sbjct: 642 VKGLNFATTTEKLAETFQSLEGFVSARVKTKTDPKKPGQVLSMGF---GFVEFRSKELAQ 698
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEED 557
AA + + L + + G+ A EE ++E+ A++
Sbjct: 699 AALKVMDNYNLEGHTLTVRASHRGLDA--------------------AEERRREDKAKKQ 738
Query: 558 NQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
Q T + +KNL F +T+ +R F G + SV V + +
Sbjct: 739 AGQ-------------------RTKIVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNFE 779
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+ + G+ F +F T + AL L+N+ L
Sbjct: 780 NR------TRGFAFAEFTTPKEAENALNALKNTHL 808
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 310 ASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP 369
AS + A + +ED + + + +I V+NL + T+ D+ LF YG L V +P
Sbjct: 718 ASHRGLDAAEERRREDKAK--KQAGQRTKIVVKNLPFEATKKDVRTLFGTYGQLRSVRVP 775
Query: 370 IDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+ E ++T+GFA F P+ A A L T LGR L L
Sbjct: 776 KNFE-NRTRGFAFAEFTTPKEAENALNALKNTHLLGRKLVL 815
>gi|219120004|ref|XP_002180750.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407466|gb|EEC47402.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 837
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/374 (40%), Positives = 207/374 (55%), Gaps = 54/374 (14%)
Query: 421 NVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL-GRVLV 479
N+D V + K DA ++VE RSK +ILVKNLP+ T DL +F GD R+L+
Sbjct: 490 NIDMDVLVSATSDK-DA--KLVE-RSKTMILVKNLPHDTTKEDLVKVFSGAGDTPSRILL 545
Query: 480 PPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNE 539
PP +VE+ N AK +F LAY +FK VPLYLEWAP
Sbjct: 546 PPSRTIAVVEYSHPNDAKRSFRKLAYRRFKNVPLYLEWAPLA------------------ 587
Query: 540 EEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-----PDTTLYIKNLNFNSTE 594
++ +N +EE N + + ++E + ED RE + P T+Y+KNLNF++TE
Sbjct: 588 -------SKRIDNGSEETNDENIIQIENS--EDANRETDDLVEGPTPTIYVKNLNFHTTE 638
Query: 595 DSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDE 654
D +R+ F K + V R +P + +SMG+GFV+F + ES L LQ ++D
Sbjct: 639 DQLRQVFSKH--VKDVRTVRIPKKIAPVKQMSMGFGFVEFGSNESARTVLNKLQGFTVDG 696
Query: 655 HQIELKRSNRNLESEATTVKRKSSNVAKQTGS---KILVRNIPFQAKQSEVEELFKAFGE 711
H +ELK S++ T + SS AK T S K++VRN+PFQA + E+ +LF +FG
Sbjct: 697 HILELKPSSK------TGNQGVSSTAAKNTTSKSTKVMVRNVPFQATRKELLQLFGSFGP 750
Query: 712 LKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL---EWAEEAD 768
LK VRLPKK GS HRGF FVE++ EA AM L +THLYGR LVL EEA+
Sbjct: 751 LKKVRLPKKFDGS--HRGFAFVEYMAAKEAAAAMHTLS-ATHLYGRHLVLEWAAADEEAE 807
Query: 769 NVEDIRKRTNRYFG 782
N++ +R + R G
Sbjct: 808 NLDILRAKAKRNIG 821
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 74/124 (59%), Gaps = 7/124 (5%)
Query: 301 SGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
+G +NN++ + H + ED + A++IA + R+F+RNL +T TEDDL FE +
Sbjct: 291 AGYTTENNDS----VGDHHLLAGEDDAE-AKNIA-ANRLFLRNLPFTATEDDLKTHFEAF 344
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
G + E +P D + ++KGFA VTF+ A A LDGT F GR+LH++P + + G
Sbjct: 345 GSIVECHVPADDQK-RSKGFAFVTFVKANDAIAAKTALDGTDFQGRLLHVLPARQAPSLG 403
Query: 421 NVDG 424
+ +G
Sbjct: 404 DGNG 407
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 105/481 (21%), Positives = 191/481 (39%), Gaps = 80/481 (16%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
+ T++ LK FE G++ + + + + + FAF+ + + + A AA + T F
Sbjct: 330 FTATEDDLKTHFEAFGSIVECHVPADDQKRSKGFAFVTFVKANDAIAAKTALDGTD-FQG 388
Query: 87 RI----KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKS- 141
R+ + +LGD K KQ+ + +S+ G +
Sbjct: 389 RLLHVLPARQAPSLGDGNGTNLTFKE---------------KQERLRKQQAESQTGWSAS 433
Query: 142 --KNDPTFSDFLQLHGKDVSKLLP----LSNKDGEEKEEENED---ESNNQIAHADISDM 192
+ D + G ++L LS+ D + E E N DM
Sbjct: 434 FVRGDAVVDNLASRLGLQKGEILAVKDGLSSGDAAVRLALGETAVIEENRDYFRLHNIDM 493
Query: 193 EYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP----- 247
+ L T KD A + +R I+VKNLP K+DL F
Sbjct: 494 DVLVSATSDKD-------------AKLVERSKTMILVKNLPHDTTKEDLVKVFSGAGDTP 540
Query: 248 --LPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIY-KYSKDNSAKYSGAA 304
+ L RT +A + + + ++ K ++ + K + +Y +++ S + +
Sbjct: 541 SRILLPPSRT----IAVVEYSHPNDAKRSFRK-LAYRRFKNVPLYLEWAPLASKRIDNGS 595
Query: 305 DDNNNASMENIKAKHWKSQEDSVQFAEDIAE--SGRIFVRNLSYTVTEDDLTKLFEKY-G 361
++ N+ ++ I ++ ED+ + +D+ E + I+V+NL++ TED L ++F K+
Sbjct: 596 EETNDENIIQI-----ENSEDANRETDDLVEGPTPTIYVKNLNFHTTEDQLRQVFSKHVK 650
Query: 362 PLAEVILP--IDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
+ V +P I + GF V F E A L G G +L L P N+
Sbjct: 651 DVRTVRIPKKIAPVKQMSMGFGFVEFGSNESARTVLNKLQGFTVDGHILELKPSSKTGNQ 710
Query: 420 GNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV 479
G +S A +K ++V+N+P++ +L LF FG L +V +
Sbjct: 711 G---------VSS---TAAKNTTSKSTK--VMVRNVPFQATRKELLQLFGSFGPLKKVRL 756
Query: 480 P 480
P
Sbjct: 757 P 757
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 28/187 (14%)
Query: 239 KDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFW-KGKQLNIYKYSKDNS 297
KD++ P +A V+ +G ++ F ++ LNK + F G L + SK +
Sbjct: 650 KDVRTVRIPKKIAPVKQMSMGFGFVEFGSNESARTVLNKLQGFTVDGHILELKPSSKTGN 709
Query: 298 AKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLF 357
S A N + +S ++ VRN+ + T +L +LF
Sbjct: 710 QGVSSTAAKNTTS------------------------KSTKVMVRNVPFQATRKELLQLF 745
Query: 358 EKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
+GPL +V LP K+ D + +GFA V ++ + A A L T GR L L
Sbjct: 746 GSFGPLKKVRLP--KKFDGSHRGFAFVEYMAAKEAAAAMHTLSATHLYGRHLVLEWAAAD 803
Query: 417 ENEGNVD 423
E N+D
Sbjct: 804 EEAENLD 810
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+++ +RN+PF A + +++ F+AFG + +P +GF FV F+ N+A A
Sbjct: 320 ANRLFLRNLPFTATEDDLKTHFEAFGSIVECHVPAD--DQKRSKGFAFVTFVKANDAIAA 377
Query: 745 MKALCQSTHLYGRRLVLEWAEEADNVED 772
AL T GR L + A +A ++ D
Sbjct: 378 KTAL-DGTDFQGRLLHVLPARQAPSLGD 404
>gi|440474273|gb|ELQ43025.1| multiple RNA-binding domain-containing protein 1 [Magnaporthe
oryzae Y34]
gi|440485469|gb|ELQ65427.1| multiple RNA-binding domain-containing protein 1 [Magnaporthe
oryzae P131]
Length = 831
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 182/331 (54%), Gaps = 33/331 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF + R ILVKN + T +LK FE +G L RVL+PP +V+F
Sbjct: 482 LDAFRH--KERGDTTILVKNFSHGTTLDELKKTFEEYGPLTRVLMPPSATIAIVQFSHAA 539
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
AK AF LAY+KFK LYLE AP+ VF E TA
Sbjct: 540 HAKTAFKKLAYSKFKSSLLYLEMAPKDVFKNVPEP-----------------------TA 576
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+E +Q + V E +E D+ E T+L++K LNF +T + + F+ S V
Sbjct: 577 QEQGKQKL-SVTELLERDDAEEQGETTSLFVKGLNFATTTEKLAETFQSLEGFVSARVKT 635
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GFV+F ++E ALKV+ N +L+ H + ++ S+R L +A +
Sbjct: 636 KTDPKKPGQVLSMGFGFVEFRSKELAQAALKVMDNYNLEGHTLTVRASHRGL--DAAEER 693
Query: 675 RKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
R+ KQ G +KI+V+N+PF+A + +V LF +G+L+ VR+PK RGF F
Sbjct: 694 RREDKAKKQAGQRTKIVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNF--ENRTRGFAF 751
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
EF T EA+ A+ AL ++THL GR+LVL++
Sbjct: 752 AEFTTPKEAENALNAL-KNTHLLGRKLVLDF 781
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I ++ R+FVRNL Y+ TEDDL +F +GPL E+ L +KG A + +
Sbjct: 306 ESIRKTSRLFVRNLPYSATEDDLKSVFGAFGPLDEIHLSHAGREGTSKGIAFIQYSESSS 365
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A A+Q LDG F GR+LH++PG+ K
Sbjct: 366 AVDAFQKLDGCDFQGRILHVLPGQAK 391
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 129/335 (38%), Gaps = 78/335 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N S+ T D+L K FE+YGPL V++P + A+V F HA A++ L
Sbjct: 495 ILVKNFSHGTTLDELKKTFEEYGPLTRVLMP------PSATIAIVQFSHAAHAKTAFKKL 548
Query: 399 DGTVFLGRMLHLIPGKPKENEGNV-------DGKVHCCISERKLDAFNQVVEARSKRIIL 451
+ F +L+L PK+ NV GK ++E L + E +
Sbjct: 549 AYSKFKSSLLYL-EMAPKDVFKNVPEPTAQEQGKQKLSVTE--LLERDDAEEQGETTSLF 605
Query: 452 VKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLVEFLQKNQAK 497
VK L + T L F+ G+VL + G VEF K A+
Sbjct: 606 VKGLNFATTTEKLAETFQSLEGFVSARVKTKTDPKKPGQVLSMGF---GFVEFRSKELAQ 662
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEED 557
AA + + L + + G+ A EE ++E+ A++
Sbjct: 663 AALKVMDNYNLEGHTLTVRASHRGLDA--------------------AEERRREDKAKKQ 702
Query: 558 NQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
Q T + +KNL F +T+ +R F G + SV V + +
Sbjct: 703 AGQ-------------------RTKIVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNFE 743
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+ + G+ F +F T + AL L+N+ L
Sbjct: 744 NR------TRGFAFAEFTTPKEAENALNALKNTHL 772
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 310 ASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP 369
AS + A + +ED + + + +I V+NL + T+ D+ LF YG L V +P
Sbjct: 682 ASHRGLDAAEERRREDKAK--KQAGQRTKIVVKNLPFEATKKDVRTLFGTYGQLRSVRVP 739
Query: 370 IDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+ E ++T+GFA F P+ A A L T LGR L L
Sbjct: 740 KNFE-NRTRGFAFAEFTTPKEAENALNALKNTHLLGRKLVL 779
>gi|392563575|gb|EIW56754.1| hypothetical protein TRAVEDRAFT_127405 [Trametes versicolor
FP-101664 SS1]
Length = 784
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 186/356 (52%), Gaps = 35/356 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD ARS RIILVKN+PY T D++ALFEP G+L RVLVPP G +VEF +
Sbjct: 430 LDTTGSKRPARSDRIILVKNIPYGTSAADVRALFEPHGELRRVLVPPAGTLAVVEFTHAD 489
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+ AF ++AY + +YLE P+G+F +E + A
Sbjct: 490 DGRKAFRAVAYRRLGNSVVYLEKGPDGMFI---------------------TDEPMTDAA 528
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPD-------TTLYIKNLNFNSTEDSIRRHFKKCGPI 607
E G + E + D TTL++KNL F++T + + +
Sbjct: 529 EPITATGSAPIAAPDAAVAEAKAGADEPALSAGTTLFVKNLAFSTTAEKLVAVMQHLPEY 588
Query: 608 ASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLE 667
A V K DP PG LSMGYGFV F+T + + LK + LD H++ K + R E
Sbjct: 589 AFARVQTKPDPARPGARLSMGYGFVGFHTTDGAKRGLKSIDGMVLDGHKLSAKWAGRGAE 648
Query: 668 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 727
EA K + A+ T K++V+N+PF+A + ++ ELF A +LK VR+P+K
Sbjct: 649 -EADGAADKETVKARTT--KMIVKNVPFEATKKDIRELFGAHAQLKSVRVPRKF--DHRT 703
Query: 728 RGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD-NVEDIRKRTNRYFG 782
RGF F+EF T++EA+RA L + TH GR LVLEWAEE + +V+ +R++ FG
Sbjct: 704 RGFAFLEFTTRHEAERAYATL-RHTHFLGRHLVLEWAEEGEVDVDKLREKAGVAFG 758
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I ++ R+F+RNL +T TED+L +LF++YG +++ L +D T ++KG A +++ P+ A
Sbjct: 251 ILQTSRLFIRNLPFTCTEDELRELFQRYGDVSQAHLILDPATKQSKGLAYISYANPDSAL 310
Query: 393 QAYQHLDGTVFLGRMLHLIPG---KPKENEGNVDGK 425
AY+ LD T F GR+LH++P + KE + +GK
Sbjct: 311 GAYEALDKTSFQGRLLHILPAVDRRGKEADAEGEGK 346
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 29 ITQEQLKAKFEEK----GTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
+TQE+L+ FE GT+TDV+L +G R F FIGY +A+ A +FN T+V
Sbjct: 13 LTQERLRKYFESSDGPGGTLTDVKLMLKRDGTSRCFGFIGYKSSQEAERAQKWFNRTFVD 72
Query: 85 SSRIKVEKCSNLGDTTKPK 103
SSRI V+ + P+
Sbjct: 73 SSRIMVDIVEGAKNAPAPR 91
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 43/213 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
T+ VKNL + L A + LP A V+T +G ++GF
Sbjct: 563 TLFVKNLAFSTTAEKLVAVMQHLPEYAFARVQTKPDPARPGARLSMGYGFVGFHTTDGAK 622
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSG--AADDNNNASMENIKAKHWKSQEDSVQFA 330
+ L KS G L+ +K S AK++G A + + A E +KA+
Sbjct: 623 RGL---KSI-DGMVLDGHKLS----AKWAGRGAEEADGAADKETVKAR------------ 662
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
+ ++ V+N+ + T+ D+ +LF + L V +P K +T+GFA + F
Sbjct: 663 -----TTKMIVKNVPFEATKKDIRELFGAHAQLKSVRVP-RKFDHRTRGFAFLEFTTRHE 716
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVD 423
A +AY L T FLGR HL+ +E E +VD
Sbjct: 717 AERAYATLRHTHFLGR--HLVLEWAEEGEVDVD 747
>gi|392579716|gb|EIW72843.1| hypothetical protein TREMEDRAFT_25743, partial [Tremella
mesenterica DSM 1558]
Length = 749
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 198/345 (57%), Gaps = 33/345 (9%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS+ I+L+KN+P+ T L LF P G++ R+L+PP G G+VE++ + A AF +L+
Sbjct: 395 RSQTILLIKNIPFGTSQHTLTDLFSPHGEIKRLLLPPSGTLGVVEYVNASDAGKAFKALS 454
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + LYLE P G+F + KE + G K + E
Sbjct: 455 YRRLGNAVLYLEKGPVGMFLD-KEPTTGPTVTKVTDVAL--------------------E 493
Query: 565 VEENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
+ E VE + P+P +TL++KNL+F +T + + + V V K DPK
Sbjct: 494 LTERVENASKDAPDPSDEAGSTLFLKNLSFATTTERLISVLFAIPGYSFVRVQTKPDPKR 553
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNV 680
PG+ LSMGYGFV F T+E+ ++AL L +D ++E+K + R +E + ++
Sbjct: 554 PGERLSMGYGFVGFKTKEAASKALPGLDGFEVDGKKLEVKFAQRGVE-DVQKEEKGGEMK 612
Query: 681 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK--MVGSGLH--RGFGFVEFI 736
K G+K+LV+N+PF+A + EV+ELF A+G++K +R+PKK + SG H RGF F+EF
Sbjct: 613 GKSKGTKLLVKNLPFEATKKEVKELFSAYGQVKSLRVPKKPTLSASGAHSSRGFAFLEFT 672
Query: 737 TKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD--NVEDIRKRTNR 779
T EA+RAM AL + THL GR LV++WA+E D +V +R++ +R
Sbjct: 673 THVEAQRAMDAL-KHTHLLGRHLVIQWAKEDDEVDVSGLREKASR 716
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I + R+FVRNL + T DL F ++G + +V LP+ + G A V F PE A
Sbjct: 214 ILSTSRLFVRNLPFVTTTSDLETHFSRFGQVDQVHLPLSP-AGQPLGTAFVLFRRPEDAL 272
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPK 416
A++ LD T F GR+LH++PG+ +
Sbjct: 273 SAFRELDKTTFQGRLLHVLPGRAR 296
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 155/401 (38%), Gaps = 91/401 (22%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSL 503
+ V+NLP+ T +DL+ F FG + +V +P P G T V F + A +AF L
Sbjct: 220 LFVRNLPFVTTTSDLETHFSRFGQVDQVHLPLSPAGQPLG-TAFVLFRRPEDALSAFREL 278
Query: 504 AYTKFKEVPLYL-----------------------------------EWAPEGVFAEAKE 528
T F+ L++ WA + ++A
Sbjct: 279 DKTTFQGRLLHVLPGRARPGHEVSGVGKGDVKKGVETKRKEQSAKGVNWASLYMNSDAVA 338
Query: 529 KSKGKEKEKNEEE---GEEGEEEKKENTAE----EDNQQGVPEVEENVEEDEEREPEPDT 581
S + ++ E G++G K AE E+ ++ E +E R P T
Sbjct: 339 ASVAQRMGISKAELLNGDDGNAAVKLALAETHVIEETKRYFEEQGIVIEALSPRTPRSQT 398
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
L IKN+ F +++ ++ F G I + + S G V++
Sbjct: 399 ILLIKNIPFGTSQHTLTDLFSPHGEIKRLLLPP-----------SGTLGVVEYVNASDAG 447
Query: 642 QALKVLQNSSLDEHQIELKRS--NRNLESEATT-------------VKRKSSNVAK---- 682
+A K L L + L++ L+ E TT + + N +K
Sbjct: 448 KAFKALSYRRLGNAVLYLEKGPVGMFLDKEPTTGPTVTKVTDVALELTERVENASKDAPD 507
Query: 683 ---QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL-----PKKMVGSGLHRGFGFVE 734
+ GS + ++N+ F + + A FVR+ PK+ G L G+GFV
Sbjct: 508 PSDEAGSTLFLKNLSFATTTERLISVLFAIPGYSFVRVQTKPDPKRP-GERLSMGYGFVG 566
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRK 775
F TK A +A+ L + G++L +++A+ VED++K
Sbjct: 567 FKTKEAASKALPGL-DGFEVDGKKLEVKFAQR--GVEDVQK 604
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 64/124 (51%)
Query: 559 QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
Q+GV +V++ + E + T L +KNL F +T+ ++ F G + S+ V +K
Sbjct: 596 QRGVEDVQKEEKGGEMKGKSKGTKLLVKNLPFEATKKEVKELFSAYGQVKSLRVPKKPTL 655
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSS 678
+ G S G+ F++F T +A+ L+++ L + ++ + + E + + ++ K+S
Sbjct: 656 SASGAHSSRGFAFLEFTTHVEAQRAMDALKHTHLLGRHLVIQWAKEDDEVDVSGLREKAS 715
Query: 679 NVAK 682
A+
Sbjct: 716 RDAR 719
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S++ VRN+PF S++E F FG++ V LP G L G FV F +A A
Sbjct: 218 SRLFVRNLPFVTTTSDLETHFSRFGQVDQVHLPLSPAGQPL--GTAFVLFRRPEDALSAF 275
Query: 746 KALCQSTHLYGRRL 759
+ L ++T GR L
Sbjct: 276 RELDKTT-FQGRLL 288
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF-SSR 87
IT E +++D+ + T RRFAF G+ + A +F++TYVF +
Sbjct: 12 ITPESFSKSLASPASLSDIVITDTRVNPKRRFAFAGFKSPEDAAKVQSWFDDTYVFGGGK 71
Query: 88 IKVE 91
+KVE
Sbjct: 72 VKVE 75
>gi|186512055|ref|NP_193696.3| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
gi|332658804|gb|AEE84204.1| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
Length = 816
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 194/340 (57%), Gaps = 33/340 (9%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RSK I+LVKNLP+ + +L +F FG L ++++PP L FL+ +A+AA +A
Sbjct: 485 RSKHILLVKNLPFASTEKELAQMFGKFGSLDKIILPPTKTMALAVFLEPAEARAALKGMA 544
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y ++K+ PLYLEWAP + + KN + E + +EN N + E
Sbjct: 545 YKRYKDAPLYLEWAPGNIL-----------EPKNLPDTNEERSDIEENGVRRVNLEQQVE 593
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC---GPIASVTVARKKDPKSP 621
++ +V E L +KNL+F +T++ +++HF K G I SVT+ + K +
Sbjct: 594 IDPDVTE--------SNVLNVKNLSFKTTDEGLKKHFTKLVKQGKILSVTIIKHKKNE-- 643
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
++LS GYGFV+F + E+ + LQ + LD H + L R E++ + K SN
Sbjct: 644 -KYLSSGYGFVEFDSVETATSVYRDLQGTVLDGHALIL----RFCENKRSDKVGKDSNKD 698
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
K +K+ V+NI F+A + E+ +LF FG++K +RLPKK +G + G+ FVEF+TK EA
Sbjct: 699 KPC-TKLHVKNIAFEATKRELRQLFSPFGQIKSMRLPKKNIGQ--YAGYAFVEFVTKQEA 755
Query: 742 KRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
A KAL STH YGR LVLEWA + +++E IRKR+ F
Sbjct: 756 LNAKKALA-STHFYGRHLVLEWANDDNSMEAIRKRSAAKF 794
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 191/411 (46%), Gaps = 71/411 (17%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ ++QL+ F +KG +TD +L + +GK R+F FIG+ +AQ A+ YFNNTY+ +S I
Sbjct: 13 VKEDQLRDHFSQKGEITDAKLMRSNDGKSRQFGFIGFRSAQEAQQAIKYFNNTYLGTSLI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
VE +GD AP+ + H K+ + K S
Sbjct: 73 IVEIAHKVGDEN---------------------APRPWSRLSHKKEEEAKKSS------- 104
Query: 149 DFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPS- 207
S+ L N G +K + D+ Q E+L++ +SK S
Sbjct: 105 ----------SEGLKDGNAKGGKKRKAEVDDPEFQ---------EFLEVHQRSKSKIWSN 145
Query: 208 DPSVPP----VSKAPVHKRQYHTIVVKN--LPAGVKKKDLKAYFKPLPLASVRTTFLGMA 261
D S+PP K V ++ +V N P KK K + + M
Sbjct: 146 DMSIPPAPEETGKEKVLVKKADEQIVSNGVEPKKAKKSSDTEKTKKSKVVAASDDVSDME 205
Query: 262 YIGFKDEKNCNKALNKN---------------KSFWKGKQLNIYKYSKDNSAKYSGAADD 306
Y + +KN + + + N K+ G+ +I + D + G D
Sbjct: 206 YFKSRIKKNLSDSESDNESEDSSEDEAGDDDGKAETDGQDADIRYFPIDGDVEAGGVGKD 265
Query: 307 NNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEV 366
++ +ME ++ +QE S ++D+ ++GR+FVRNL YT TE++L + F +G ++EV
Sbjct: 266 DDGDAME-VEGDGKVAQE-SKAVSDDVLDTGRLFVRNLPYTATEEELMEHFSTFGKISEV 323
Query: 367 ILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
L +DKET +++G A + +L+PE A +A + LD + F GR+LH++P K +E
Sbjct: 324 HLVLDKETKRSRGIAYILYLIPECAARAMEELDNSSFQGRLLHILPAKHRE 374
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 135/555 (24%), Positives = 215/555 (38%), Gaps = 100/555 (18%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRR-FAFIGYHREDQAQAALDYFNNTYVFS 85
Y T+E+L F G +++V L E K R A+I Y + A A++ +N+ F
Sbjct: 303 YTATEEELMEHFSTFGKISEVHLVLDKETKRSRGIAYILYLIPECAARAMEELDNSS-FQ 361
Query: 86 SRI--------------KVEKCSNLGDTTKPK-----SWSKYAPDSSAYQKLHNIAPKQD 126
R+ +V SNL T K K S+ D+ A+ L
Sbjct: 362 GRLLHILPAKHRETSDKQVNDTSNLPKTFKQKREEQRKASEAGGDTKAWNSLF------- 414
Query: 127 LKPEHTKDSKPGKKSKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENED----ESNN 182
++P D + ++++G S+LL +D + E E+
Sbjct: 415 MRP--------------DTILENIVRVYGVSKSELLDREAEDPAVRLALGETKVIAETKE 460
Query: 183 QIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLK 242
+A A ++ K T++ D R H ++VKNLP +K+L
Sbjct: 461 ALAKAGVNVTSLEKFATRNGDE---------------KNRSKHILLVKNLPFASTEKELA 505
Query: 243 AYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIY-KYSKDNS 297
F S+ L MA F + AL K ++ + K +Y +++ N
Sbjct: 506 QMFGKF--GSLDKIILPPTKTMALAVFLEPAEARAAL-KGMAYKRYKDAPLYLEWAPGNI 562
Query: 298 AKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLF 357
+ D N S + E V+ D+ ES + V+NLS+ T++ L K F
Sbjct: 563 LEPKNLPDTNEERSDIEENGVRRVNLEQQVEIDPDVTESNVLNVKNLSFKTTDEGLKKHF 622
Query: 358 EKY---GPLAEVILPIDKETDK--TKGFALVTFLMPEHATQAYQHLDGTVFLGR--MLHL 410
K G + V + K+ +K + G+ V F E AT Y+ L GTV G +L
Sbjct: 623 TKLVKQGKILSVTIIKHKKNEKYLSSGYGFVEFDSVETATSVYRDLQGTVLDGHALILRF 682
Query: 411 IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEP 470
K + G K C + VKN+ + +L+ LF P
Sbjct: 683 CENKRSDKVGKDSNKDKPCTK------------------LHVKNIAFEATKRELRQLFSP 724
Query: 471 FGDLGRVLVPP-----YGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE 525
FG + + +P Y VEF+ K +A A +LA T F L LEWA + E
Sbjct: 725 FGQIKSMRLPKKNIGQYAGYAFVEFVTKQEALNAKKALASTHFYGRHLVLEWANDDNSME 784
Query: 526 A-KEKSKGKEKEKNE 539
A +++S K E+N+
Sbjct: 785 AIRKRSAAKFDEEND 799
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+I V+N+P K+ ++ + F GE+ +L + G R FGF+ F + EA++A+
Sbjct: 2 SRICVKNLPKHVKEDQLRDHFSQKGEITDAKLMRS--NDGKSRQFGFIGFRSAQEAQQAI 59
Query: 746 KALCQSTHLYGRRLVLEWA 764
K +T+L +++E A
Sbjct: 60 KYF-NNTYLGTSLIIVEIA 77
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+ + +KNL + ED +R HF + G I + R D K S +GF+ F + +
Sbjct: 2 SRICVKNLPKHVKEDQLRDHFSQKGEITDAKLMRSNDGK------SRQFGFIGFRSAQEA 55
Query: 641 NQALKVLQNSSL 652
QA+K N+ L
Sbjct: 56 QQAIKYFNNTYL 67
>gi|146422677|ref|XP_001487274.1| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 269/542 (49%), Gaps = 102/542 (18%)
Query: 314 NIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE 373
NI+ + K +E +E IA++GR+FVRN+ YT TE++ LF+KYG L EV + +D
Sbjct: 329 NIEVQETKQEESP---SEKIAKTGRLFVRNILYTSTEEEFRTLFQKYGSLEEVHIAVDTR 385
Query: 374 TDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN--------------- 418
T K+KGF V F P+ A +AY+ LD +F GR+LH++P + K++
Sbjct: 386 TGKSKGFVYVQFKQPKDAVEAYKSLDKQIFQGRLLHILPAEAKKDHRLDEFDIKNLPLKK 445
Query: 419 EGNVDGKVHCCISERKLDAF-------------------NQVVEARSKRIILVKNLPYRT 459
+ ++ K S+ ++ + +++A S + + L
Sbjct: 446 QRDLKKKAQAAKSQFSWNSLYMNSDAVLESVAAKMGVSKSDLIDAESSSSGVKQALAEAH 505
Query: 460 LPTDLKALFEPFG-----------DLGRVLVP--PYGITGLVE----FLQKNQAKAAF-- 500
+ D++ FE G D VLV PYG TG+ E F Q K
Sbjct: 506 VIGDVRKYFESKGVDLTSFSKKERDDKIVLVKNFPYG-TGVNELNEMFGQYGPIKRTLMP 564
Query: 501 --NSLAYTKFKEVP------------------LYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
++A +F++ P LYLE P+G+F +E + E +E
Sbjct: 565 PAGTIAVIEFQDAPSARAAFTKLAYRKFNNSILYLEKGPKGLF--IREPVTSEVVEVEKE 622
Query: 541 EGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRH 600
+ E+G E K + + N +DE P ++++KNLNF++T+ +
Sbjct: 623 KVEQGIEPKVTANS----------LISNDAKDETEIEGPTVSVFVKNLNFSTTQPQLASV 672
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
F+K A + K DPK G LSMG+GFV+F ++E A+ L + LD H+++LK
Sbjct: 673 FEKLPGFALAIIKTKPDPKKSGATLSMGFGFVEFKSKEEAEAAISALNDYVLDGHKLQLK 732
Query: 661 RSNRN-LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK 719
S+R +S+ K +N KI+++N+PF+A + +V ELF AFG+LK VR+PK
Sbjct: 733 LSHRQGGQSKGGASKTNKTN-------KIIIKNLPFEATRKDVLELFGAFGQLKSVRVPK 785
Query: 720 KMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVE-DIRKRT 777
K S RGF FVEF+ EA+ AM L + HL GRRLV+++AE +A++ E +I K T
Sbjct: 786 KFDKSA--RGFAFVEFVLLKEAENAMDQL-EGVHLLGRRLVMQYAEKDAEDAEAEIAKMT 842
Query: 778 NR 779
+
Sbjct: 843 KK 844
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 33 QLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEK 92
+L+ F ++G VTDV+L G+ RRFAF+GY D A+ A YF+ +++ ++RI VE
Sbjct: 70 KLRDHFLKQGNVTDVKLMKKRNGESRRFAFVGYKSIDDAEKAAKYFHQSFMDTARIHVEL 129
Query: 93 CSNLGDTTKPKSW--SKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDF 150
D T P S+ + + ++ + +Q K + TK S+ K+ +N+P +F
Sbjct: 130 AKTFSDPTVPLSFREQQRIKQNRLQEQEERLLQQQLFKRQKTK-SQIDKEIENNPKLQEF 188
Query: 151 LQL 153
+++
Sbjct: 189 MEV 191
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 44/198 (22%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
++ VKNL + L + F+ LP LA ++T +G ++ FK ++
Sbjct: 654 SVFVKNLNFSTTQPQLASVFEKLPGFALAIIKTKPDPKKSGATLSMGFGFVEFKSKEEAE 713
Query: 273 KALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE 331
A++ N G +L + K S + G A N
Sbjct: 714 AAISALNDYVLDGHKLQL-KLSHRQGGQSKGGASKTN----------------------- 749
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEH 390
++ +I ++NL + T D+ +LF +G L V +P K+ DK+ +GFA V F++ +
Sbjct: 750 ---KTNKIIIKNLPFEATRKDVLELFGAFGQLKSVRVP--KKFDKSARGFAFVEFVLLKE 804
Query: 391 ATQAYQHLDGTVFLGRML 408
A A L+G LGR L
Sbjct: 805 AENAMDQLEGVHLLGRRL 822
>gi|156054690|ref|XP_001593271.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980]
gi|154703973|gb|EDO03712.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 842
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 193/345 (55%), Gaps = 27/345 (7%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF + R ILVKN Y +L+ FE FG + RVL+PP G +VEF Q
Sbjct: 486 LDAFKK--RERGDTAILVKNFTYGMTLEELRKTFEEFGQVIRVLMPPTGTIAIVEFAQPT 543
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
A+AAF SLAY + K+ L+LE AP+ +F ++N + + K +
Sbjct: 544 HARAAFASLAYRRMKDTVLFLEKAPKDLFTGPAPSQPVATIDRN---AGKAADPKFSTSD 600
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ + G ENV+ TTL+++NLNF++T + FK S V
Sbjct: 601 LLERESGA----ENVDT---------TTLFVRNLNFSTTSQRLTEVFKPLDGFLSARVNT 647
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GF++F T+ A+K + +LD H++ +K S++ ++A K
Sbjct: 648 KTDPKKPGQVLSMGFGFIEFRTKSQAQAAIKAMDGYTLDNHKLLVKASHKG--ADAAEEK 705
Query: 675 RKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
RK K G +K++V+N+PF+A +S++ +LF +G+L+ VR+PKK S RGF F
Sbjct: 706 RKEDRAKKLAGKRTKLIVKNLPFEASKSDIRKLFGTYGQLRSVRMPKKFDHS--TRGFAF 763
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE--ADNVEDIRK 775
+FIT EA+ A++AL + THL GRRLV+++A E D E+I K
Sbjct: 764 ADFITAREAENALEAL-KDTHLLGRRLVIDFASEETVDAEEEIEK 807
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I SGR+FVRNL Y+ TEDDL K FE+YG L E+ LP+D + +KGF LV + P
Sbjct: 309 ETIKASGRLFVRNLPYSATEDDLRKHFEQYGALEEIHLPVDAKG-ASKGFVLVQYTDPNA 367
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A +AY ++DG F GR+LH++P K +
Sbjct: 368 AAEAYHNVDGEPFQGRLLHILPAAAKRD 395
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 133/341 (39%), Gaps = 82/341 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N +Y +T ++L K FE++G + V++P T A+V F P HA A+ L
Sbjct: 499 ILVKNFTYGMTLEELRKTFEEFGQVIRVLMP------PTGTIAIVEFAQPTHARAAFASL 552
Query: 399 ------DGTVFLGRM---LHLIPGKPKENEGNVD---GK-VHCCISERKLDAFNQVVEAR 445
D +FL + L P P + +D GK S L E
Sbjct: 553 AYRRMKDTVLFLEKAPKDLFTGPA-PSQPVATIDRNAGKAADPKFSTSDLLERESGAENV 611
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLVEFL 491
+ V+NL + T L +F+P G+VL + G +EF
Sbjct: 612 DTTTLFVRNLNFSTTSQRLTEVFKPLDGFLSARVNTKTDPKKPGQVLSMGF---GFIEFR 668
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
K+QA+AA ++ L ++ + +G A EE++KE
Sbjct: 669 TKSQAQAAIKAMDGYTLDNHKLLVKASHKGADA--------------------AEEKRKE 708
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
+ A++ + T L +KNL F +++ IR+ F G + SV
Sbjct: 709 DRAKKLAGKR-------------------TKLIVKNLPFEASKSDIRKLFGTYGQLRSVR 749
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+ +K D + G+ F F T AL+ L+++ L
Sbjct: 750 MPKKFDHS------TRGFAFADFITAREAENALEALKDTHL 784
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 34/196 (17%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-------------PLASVRTTFLGMAYIGFKDEKNCN 272
T+ V+NL + L FKPL P + +G +I F+ +
Sbjct: 615 TLFVRNLNFSTTSQRLTEVFKPLDGFLSARVNTKTDPKKPGQVLSMGFGFIEFRTKSQAQ 674
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
A+ G L+ +K S K + AA++ K +ED + +
Sbjct: 675 AAIKA----MDGYTLDNHKLLVKASHKGADAAEE--------------KRKEDRAK--KL 714
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ ++ V+NL + ++ D+ KLF YG L V +P K T+GFA F+ A
Sbjct: 715 AGKRTKLIVKNLPFEASKSDIRKLFGTYGQLRSVRMP-KKFDHSTRGFAFADFITAREAE 773
Query: 393 QAYQHLDGTVFLGRML 408
A + L T LGR L
Sbjct: 774 NALEALKDTHLLGRRL 789
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+++ K F +TD +L RR +IGY ++A A+ YFN ++V S+I
Sbjct: 15 ITEDEFKTHFGANQEITDAKLI-----SHRRIGYIGYKTPEEAVKAVKYFNKSFVRLSKI 69
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKN----D 144
VE + D++ P S K+ ++ + D K + ++ +K + D
Sbjct: 70 GVEIARPISDSSLPISRKVQREQERENNKIRHLKQEADAKASESLNTGTKRKRSDIDAAD 129
Query: 145 PTFSDFLQL 153
P +FL++
Sbjct: 130 PKLQEFLEV 138
>gi|119496815|ref|XP_001265181.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
gi|119413343|gb|EAW23284.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
Length = 825
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 188/337 (55%), Gaps = 35/337 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF Q R ILVKN Y DL+ LFEP+G + R+L+PP G +VEF + +
Sbjct: 473 LDAFKQ--RERGNTAILVKNFSYGVKVDDLRKLFEPYGQITRLLMPPSGTIAIVEFARPD 530
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVF--AEAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
+A+ AF LAY K + L+LE AP +F A + S + K +
Sbjct: 531 EAQKAFKGLAYRKVGDSILFLEKAPANLFDATSAPQTSVLETKAVS-------------- 576
Query: 553 TAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
QG + ED + EP +TL++KNLNF++T + FK S +
Sbjct: 577 -------QGFSTADTFAAEDGD-EPVVTSTLFVKNLNFSTTNEKFTEVFKPLDGFVSARI 628
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
K DPK PGQ LSMG+GFV F T+ AL + LD+H++ ++ SN+ +++
Sbjct: 629 KTKPDPKRPGQTLSMGFGFVDFRTKAQAQAALAAMNGYKLDQHELVVRASNKAMDAAE-- 686
Query: 673 VKRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
+R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RG
Sbjct: 687 -ERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RG 743
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
FGF +F++ EA+ AM AL ++THL GRRLVLE+A E
Sbjct: 744 FGFADFVSAREAENAMDAL-KNTHLLGRRLVLEFANE 779
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I S R+FVRNL Y +E DL +F K+G + E+ + D + +KGFA V ++ P+
Sbjct: 295 EHIRLSSRLFVRNLPYDASESDLEPVFSKFGKVEEIHVAFDTRSTTSKGFAYVQYIEPDA 354
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A QAY+ LDG F GR++H++P K
Sbjct: 355 AVQAYKELDGKHFQGRLMHILPAAAK 380
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 147/369 (39%), Gaps = 74/369 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N SY V DDL KLFE YG + +++P + A+V F P+ A +A++ L
Sbjct: 486 ILVKNFSYGVKVDDLRKLFEPYGQITRLLMP------PSGTIAIVEFARPDEAQKAFKGL 539
Query: 399 ------DGTVFLGRM-LHLIPGKPKENEGNVDGK-VHCCISERKLDAFNQVVEARSKRII 450
D +FL + +L ++ K V S A E +
Sbjct: 540 AYRKVGDSILFLEKAPANLFDATSAPQTSVLETKAVSQGFSTADTFAAEDGDEPVVTSTL 599
Query: 451 LVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPY----GIT-----GLVEFLQKNQAKAA 499
VKNL + T +F+P R+ P G T G V+F K QA+AA
Sbjct: 600 FVKNLNFSTTNEKFTEVFKPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTKAQAQAA 659
Query: 500 FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQ 559
++ K + L + + + + A EE ++E+TA++
Sbjct: 660 LAAMNGYKLDQHELVVRASNKAMDA--------------------AEERRREDTAKKIAA 699
Query: 560 QGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
+ T + IKNL F +T+ +R F G + SV V +K D
Sbjct: 700 R-------------------RTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRS 740
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN 679
+ G+GF F + A+ L+N+ L ++ L+ +N EA +++
Sbjct: 741 ------ARGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFAN----EEAVDPEQEIEQ 790
Query: 680 VAKQTGSKI 688
+ K+ G ++
Sbjct: 791 IEKKVGEQL 799
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 79/199 (39%), Gaps = 36/199 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-------------PLASVRTTFLGMAYIGFKDEKNCN 272
T+ VKNL + FKPL P +T +G ++ F+
Sbjct: 598 TLFVKNLNFSTTNEKFTEVFKPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFR------ 651
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
K ++ +N YK + AS + + A + +ED+ + +
Sbjct: 652 ---TKAQAQAALAAMNGYKLDQHELVV---------RASNKAMDAAEERRREDTAK--KI 697
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
A +I ++NL + T+ D+ LF YG L V +P K+ D++ +GF F+ A
Sbjct: 698 AARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP--KKFDRSARGFGFADFVSAREA 755
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A L T LGR L L
Sbjct: 756 ENAMDALKNTHLLGRRLVL 774
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S++ VRN+P+ A +S++E +F FG+++ + + S +GF +V++I + A +A
Sbjct: 301 SRLFVRNLPYDASESDLEPVFSKFGKVEEIHVAFD-TRSTTSKGFAYVQYIEPDAAVQAY 359
Query: 746 KALCQSTHLYGRRL 759
K L H GR +
Sbjct: 360 KEL-DGKHFQGRLM 372
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 29/168 (17%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
T +QL+ F + +TD + RR F+G+ + AQ A YFN TYV S+I
Sbjct: 15 FTNDQLRKHFASRFQITDAHVLPK-----RRIGFVGFKSPEAAQQAASYFNKTYVKMSKI 69
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
VE + D+ K K+ +S++ A K+ + G ++ DP
Sbjct: 70 SVEIAKPI-DSEPVKKAEKHKKESASNDSTAGNALKR---------KRDGDNTQQDPQLQ 119
Query: 149 DFLQL-----------HGKDVSKLLPLSNKDG-EEKEEENEDESNNQI 184
++L + +G+D L + N+ E+ EE D++ Q+
Sbjct: 120 EYLSVIERPSNTKTWANGEDF--LNTVQNQPATSERREEQRDDTTEQV 165
>gi|254580399|ref|XP_002496185.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
gi|238939076|emb|CAR27252.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
Length = 866
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 204/373 (54%), Gaps = 37/373 (9%)
Query: 419 EGNVDGKVHCCISERKLDA--FNQVVE--ARSKRIILVKNLPYRTLPTDLKALFEPFGDL 474
E +V G V + +D F+Q+ R R+ILVKN PY T +L LF PFG L
Sbjct: 485 EAHVIGDVRKYFESKGVDLAKFDQLKSPGQRDDRVILVKNFPYGTTVEELGELFLPFGKL 544
Query: 475 GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVF---AEAKEKSK 531
R L+PP G ++++ A+AAF+ LAY +FK+ +YLE P+ F A+ E+ +
Sbjct: 545 ERFLMPPAGTIAIIQYRDVTSARAAFSKLAYKRFKDGIIYLEKGPKDCFTRDAQTDERME 604
Query: 532 GKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFN 591
G EK + +E + E+ D+ Q E ++ E P ++++KNLNF
Sbjct: 605 GSEKPEVVKEAKPS----AEDIMNTDDTQA--EADDGFE-------GPTASIFVKNLNFA 651
Query: 592 STEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
+T + FK V K DP + G+ LSMG+GFV+F +R + L ++
Sbjct: 652 TTTQQLAEKFKPFDGFVVAQVKTKPDPSNTGKVLSMGFGFVEFKSRAQAVAVINALDGTA 711
Query: 652 LDEHQIELKRSNRNLESEATTVKRKSSNVAKQT---GSKILVRNIPFQAKQSEVEELFKA 708
LD H+++LK S+R + S+N KQT KI+V+N+PF+A + +V ELF +
Sbjct: 712 LDGHKLQLKLSHR---------QGGSTNAPKQTRKKSGKIIVKNLPFEAARKDVFELFSS 762
Query: 709 FGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE--E 766
FG+LK VR+PKK S RGF FVEF+ EA+ AM L Q HL GRRLV+++A+
Sbjct: 763 FGQLKSVRVPKKFDKSA--RGFAFVEFLLPKEAENAMDQL-QGVHLLGRRLVMQYAQEDA 819
Query: 767 ADNVEDIRKRTNR 779
D E+IR+ TNR
Sbjct: 820 EDAEEEIRRMTNR 832
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 60/88 (68%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I+E+GR+F+RN+ Y TEDD +LF K+G L EV + +D T ++KGFA V F P+
Sbjct: 325 EKISETGRLFLRNILYGSTEDDFKELFGKFGELEEVHIALDTRTGQSKGFAYVQFKDPKD 384
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A +AY LD +F GR+LH++P ++N
Sbjct: 385 AVEAYIELDKQIFQGRLLHILPANSQKN 412
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 82/199 (41%), Gaps = 42/199 (21%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
+I VKNL + L FKP +A V+T +G ++ FK
Sbjct: 642 SIFVKNLNFATTTQQLAEKFKPFDGFVVAQVKTKPDPSNTGKVLSMGFGFVEFKSRAQAV 701
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+N G L+ +K S + G+ NA + K
Sbjct: 702 AVINA----LDGTALDGHKLQLKLSHRQGGS----TNAPKQTRK---------------- 737
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
+SG+I V+NL + D+ +LF +G L V +P K+ DK+ +GFA V FL+P+ A
Sbjct: 738 --KSGKIIVKNLPFEAARKDVFELFSSFGQLKSVRVP--KKFDKSARGFAFVEFLLPKEA 793
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A L G LGR L +
Sbjct: 794 ENAMDQLQGVHLLGRRLVM 812
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 124/327 (37%), Gaps = 54/327 (16%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKALN 276
+R I+VKN P G ++L F LP + + +A I ++D + A +
Sbjct: 514 QRDDRVILVKNFPYGTTVEELGELF--LPFGKLERFLMPPAGTIAIIQYRDVTSARAAFS 571
Query: 277 K--NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
K K F G + + K KD + + + + + + S ED + + A
Sbjct: 572 KLAYKRFKDGI-IYLEKGPKDCFTRDAQTDERMEGSEKPEVVKEAKPSAEDIMNTDDTQA 630
Query: 335 E--------SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL------PIDKETDK--TK 378
E + IFV+NL++ T L EK+ P ++ P T K +
Sbjct: 631 EADDGFEGPTASIFVKNLNFATTTQQLA---EKFKPFDGFVVAQVKTKPDPSNTGKVLSM 687
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAF 438
GF V F A LDGT G L L +S R+ +
Sbjct: 688 GFGFVEFKSRAQAVAVINALDGTALDGHKLQL------------------KLSHRQGGST 729
Query: 439 NQVVEARSKR-IILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFL 491
N + R K I+VKNLP+ D+ LF FG L V VP G VEFL
Sbjct: 730 NAPKQTRKKSGKIIVKNLPFEAARKDVFELFSSFGQLKSVRVPKKFDKSARGF-AFVEFL 788
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+A+ A + L L +++A
Sbjct: 789 LPKEAENAMDQLQGVHLLGRRLVMQYA 815
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TD+++ +G+ RRFAFIGY ED A+ A+ +F+ T++ ++RI V + D + P+
Sbjct: 39 ITDLKILKDRDGQSRRFAFIGYRNEDDAKDAVQFFHRTFIDATRIDVSMAKSFADPSVPQ 98
>gi|145228995|ref|XP_001388806.1| multiple RNA-binding domain-containing protein 1 [Aspergillus niger
CBS 513.88]
gi|134054902|emb|CAK36914.1| unnamed protein product [Aspergillus niger]
gi|350638000|gb|EHA26356.1| multiple RNA-binding domain-containing protein [Aspergillus niger
ATCC 1015]
Length = 825
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 188/333 (56%), Gaps = 31/333 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
++AF Q R ILVKN Y +L+ +FEPFG + R+L+PP G +VEF + +
Sbjct: 473 IEAFKQ--RERGNTAILVKNFSYGVKTDELRKMFEPFGQITRLLMPPSGTIAIVEFSRPD 530
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY K + L+LE AP+ +F A K + K +G +TA
Sbjct: 531 EAQKAFKGLAYRKLGDSILFLEKAPKDLFDAAVVPQKATIETKAVSQGF--------STA 582
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ DE + P TTL++KNLNF +T S F+ S +
Sbjct: 583 D------------TFAADEVDDLTPTTTLFVKNLNFATTNQSFVDLFRPLDGFVSAKIKT 630
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GFV+F ++ AL + LD+H++ ++ S+R +++ +
Sbjct: 631 KPDPKHPGQTLSMGFGFVEFRSKAQAQSALAAMNGYKLDQHELVVRVSHRGMDA---AEE 687
Query: 675 RKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+P+K S RGFG
Sbjct: 688 RRREDTAKKVAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPQKFDRSA--RGFG 745
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
F +F++ EA+ AM AL ++THL GR+LVLE+A
Sbjct: 746 FADFVSAREAENAMDAL-KNTHLLGRKLVLEFA 777
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E+I S R+FVRNL+Y +E DL LF +G + E+ + D + +KGFA + +L +
Sbjct: 295 ENIRLSARLFVRNLAYDTSESDLEPLFAPFGRIEEIHVAFDTRVNTSKGFAYIQYLDADA 354
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A +AY++LDG F GR++H++P K+
Sbjct: 355 AVEAYKNLDGKHFQGRLMHILPAAAKKT 382
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 145/365 (39%), Gaps = 72/365 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N SY V D+L K+FE +G + +++P + A+V F P+ A +A++ L
Sbjct: 486 ILVKNFSYGVKTDELRKMFEPFGQITRLLMP------PSGTIAIVEFSRPDEAQKAFKGL 539
Query: 399 DGTVFLGRMLHLIPGKPKE--------NEGNVDGK-VHCCISERKLDAFNQVVEARSKRI 449
LG + + PK+ + ++ K V S A ++V +
Sbjct: 540 -AYRKLGDSILFLEKAPKDLFDAAVVPQKATIETKAVSQGFSTADTFAADEVDDLTPTTT 598
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPP----YGIT-----GLVEFLQKNQAKA 498
+ VKNL + T LF P ++ P G T G VEF K QA++
Sbjct: 599 LFVKNLNFATTNQSFVDLFRPLDGFVSAKIKTKPDPKHPGQTLSMGFGFVEFRSKAQAQS 658
Query: 499 AFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDN 558
A ++ K + L + + G+ A EE ++E+TA++
Sbjct: 659 ALAAMNGYKLDQHELVVRVSHRGMDA--------------------AEERRREDTAKKVA 698
Query: 559 QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
+ T + IKNL F +T+ +R F G + SV V +K D
Sbjct: 699 AR-------------------RTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPQKFDR 739
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSS 678
+ G+GF F + A+ L+N+ L ++ L+ +N +K+
Sbjct: 740 S------ARGFGFADFVSAREAENAMDALKNTHLLGRKLVLEFANEEAIDAEEEIKQIEK 793
Query: 679 NVAKQ 683
V +Q
Sbjct: 794 KVGEQ 798
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 122/313 (38%), Gaps = 42/313 (13%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGM------AYIGFKDEKNCNKALNKNKS 280
I+VKN GVK +L+ F+P + T L M A + F KA K +
Sbjct: 486 ILVKNFSYGVKTDELRKMFEPFG----QITRLLMPPSGTIAIVEFSRPDEAQKAF-KGLA 540
Query: 281 FWK--GKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE--DIAES 336
+ K L + K KD AA A++E S D+ E D+ +
Sbjct: 541 YRKLGDSILFLEKAPKD----LFDAAVVPQKATIETKAVSQGFSTADTFAADEVDDLTPT 596
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL---PIDKETDKT--KGFALVTFLMPEHA 391
+FV+NL++ T LF + P K +T GF V F A
Sbjct: 597 TTLFVKNLNFATTNQSFVDLFRPLDGFVSAKIKTKPDPKHPGQTLSMGFGFVEFRSKAQA 656
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
A ++G L + V + ER+ + + V AR +II
Sbjct: 657 QSALAAMNGYKLDQHELVV----------RVSHRGMDAAEERRREDTAKKVAARRTKII- 705
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAY 505
+KNLP++ D+++LF +G L V VP G G +F+ +A+ A ++L
Sbjct: 706 IKNLPFQATKKDVRSLFGAYGQLRSVRVPQKFDRSARGF-GFADFVSAREAENAMDALKN 764
Query: 506 TKFKEVPLYLEWA 518
T L LE+A
Sbjct: 765 THLLGRKLVLEFA 777
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 73/198 (36%), Gaps = 34/198 (17%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-------------PLASVRTTFLGMAYIGFKDEKNCN 272
T+ VKNL + F+PL P +T +G ++ F+ +
Sbjct: 598 TLFVKNLNFATTNQSFVDLFRPLDGFVSAKIKTKPDPKHPGQTLSMGFGFVEFRSKAQAQ 657
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
AL +N YK + S + A + +ED+ + +
Sbjct: 658 SAL---------AAMNGYKLDQHELVV---------RVSHRGMDAAEERRREDTAK--KV 697
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
A +I ++NL + T+ D+ LF YG L V +P K +GF F+ A
Sbjct: 698 AARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP-QKFDRSARGFGFADFVSAREAE 756
Query: 393 QAYQHLDGTVFLGRMLHL 410
A L T LGR L L
Sbjct: 757 NAMDALKNTHLLGRKLVL 774
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
++ +QL+ F + VTD + RR F+G+ + AQ A+ YFN TYV S+I
Sbjct: 15 LSDDQLRKHFATRFQVTDAHVLPK-----RRIGFVGFKSHEVAQQAVSYFNKTYVKMSKI 69
Query: 89 KVE 91
V+
Sbjct: 70 SVD 72
>gi|444723044|gb|ELW63709.1| putative RNA-binding protein 19 [Tupaia chinensis]
Length = 1033
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/292 (42%), Positives = 166/292 (56%), Gaps = 29/292 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +IL KNLP TL +L+ LF FG LGRVL+P G+T +VEFL+
Sbjct: 676 LDSFSQAAAERSKTVILAKNLPAGTLAAELQELFGRFGSLGRVLLPEGGVTAIVEFLEPL 735
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY+KF VPLYLEWAP GVF+ S KE + E++ E
Sbjct: 736 EARKAFRQLAYSKFHHVPLYLEWAPTGVFS-----SLAPRKEPQHAPAQPAGEDEAEAET 790
Query: 555 EEDNQQGVPEVEENVEEDEEREP-------------------EPDTTLYIKNLNFNSTED 595
D++ PE E+ E P P TL+IKNLNF++ E+
Sbjct: 791 VPDSE--TPEGEKPTGGGTEDTPAKMEEEDDEDEGEGEDEESSPGCTLFIKNLNFDTAEE 848
Query: 596 SIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEH 655
++R+ F K G + S +++RKK+ G LSMG+GFV++ E +ALK LQ +D H
Sbjct: 849 TLRKVFSKVGMVKSCSISRKKN--KAGALLSMGFGFVEYKKPEQAQKALKQLQGHVVDGH 906
Query: 656 QIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFK 707
++E++ S R + A T RK KQT SKILVRNIPFQA E+ ELF+
Sbjct: 907 KLEVRISERATKP-AITSARKKQVSRKQTTSKILVRNIPFQADSREIRELFR 957
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 63/80 (78%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+A+SGR+FVRNL YT TE+DL KLF KYGP++E+ PID T K KGFA VTF+ PEHA
Sbjct: 500 LADSGRLFVRNLPYTSTEEDLEKLFSKYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHAV 559
Query: 393 QAYQHLDGTVFLGRMLHLIP 412
+AY +DG VF GRMLH++P
Sbjct: 560 KAYAQVDGQVFQGRMLHVLP 579
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 152/354 (42%), Gaps = 105/354 (29%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL++FN +++ +SRI
Sbjct: 58 MKEERFRQLFSTFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNHFNKSFIDTSRI 117
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKS------- 141
VE C + GD TKP++WSK+A S ++ P +D P TK K GKK
Sbjct: 118 TVEFCKSFGDPTKPRAWSKHAQKPSQSRQ-----PSKDSVPPETK--KDGKKKVAGELEK 170
Query: 142 -KNDPTFSDFLQLHGKDV----------------SKLLPLSN--------KDGEEKEEEN 176
K D F +FL +H K V K P S+ G+E EEE
Sbjct: 171 LKEDTEFQEFLSVHQKRVQAATWANDALSTDASKGKSRPASDYLNFDSDSDSGQESEEER 230
Query: 177 --------EDESNNQIAHADISDMEYLKLKT----------------------------- 199
ED ++SDM+YLK K
Sbjct: 231 AGEDQGEEEDPQPKAAVQKELSDMDYLKSKMVKAELSSSSEEEESEDEAVNCDEGSEAEE 290
Query: 200 KSKDTAPS-----------DPSVP---------PVSKAPVHKRQ---YHTIVVKNLPAGV 236
++ TAP+ +P P ++ P ++R+ HT+ ++ P V
Sbjct: 291 EASTTAPAQQGREPQGACQEPGTPGKKTPQEARAKTEKPANQREPTTPHTVKLRGAPFNV 350
Query: 237 KKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKG 284
+K++ + PL ++R G ++ F E+ KAL N+ + +G
Sbjct: 351 TEKNVTEFLAPLKPVAIRIVRNAHGNKTGYVFVDFNSEEEVKKALKCNREYMEG 404
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 37/144 (25%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ E+ L K+F K G + I ++ +K + GF V + PE A +
Sbjct: 836 LFIKNLNFDTAEETLRKVFSKVGMVKSC--SISRKKNKAGALLSMGFGFVEYKKPEQAQK 893
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRI--- 449
A + L G V VDG K+ ISER + AR K++
Sbjct: 894 ALKQLQGHV-------------------VDGHKLEVRISERATKP--AITSARKKQVSRK 932
Query: 450 -----ILVKNLPYRTLPTDLKALF 468
ILV+N+P++ +++ LF
Sbjct: 933 QTTSKILVRNIPFQADSREIRELF 956
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 677 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
S A+++ + IL +N+P +E++ELF FG L V LP+ V + VEF+
Sbjct: 680 SQAAAERSKTVILAKNLPAGTLAAELQELFGRFGSLGRVLLPEGGVTA-------IVEFL 732
Query: 737 TKNEAKRAMKALCQSTHLYGRRLVLEWA 764
EA++A + L S + L LEWA
Sbjct: 733 EPLEARKAFRQLAYS-KFHHVPLYLEWA 759
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM--VGSGLHRGFGFVEFITKNEAK 742
G + ++N+ F + + ++F G +K + +K G+ L GFGFVE+ +A+
Sbjct: 833 GCTLFIKNLNFDTAEETLRKVFSKVGMVKSCSISRKKNKAGALLSMGFGFVEYKKPEQAQ 892
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEA 767
+A+K L Q + G +L + +E A
Sbjct: 893 KALKQL-QGHVVDGHKLEVRISERA 916
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF FG L L K G R FGF+ F ++ EA+ A+
Sbjct: 47 SRLIVKNLPNGMKEERFRQLFSTFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQTAL 104
>gi|403213912|emb|CCK68414.1| hypothetical protein KNAG_0A07610 [Kazachstania naganishii CBS
8797]
Length = 867
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 124/319 (38%), Positives = 179/319 (56%), Gaps = 12/319 (3%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R R+ILVKN P+ T +L LF PFG L R+L+PP G +V++ A+AAF LA
Sbjct: 508 RDDRVILVKNFPFGTNIEELGELFLPFGKLERLLLPPAGTIAIVQYKDIPSARAAFTKLA 567
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y +FK+ +YLE P+ FA + EKE E + + E N+
Sbjct: 568 YKRFKDGIIYLEKGPKNCFARDATADEAMEKET----APAVEIKPSVHDIMEGNKSKEEV 623
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
++ E D++ P ++++KNLNF++T + FKK G V K DPK G
Sbjct: 624 SQDAHERDDDAIDGPTVSIFVKNLNFSTTSVQLTDRFKKFGGFVVAQVKTKPDPKREGHT 683
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
LSMG+GFV+F T+E N + + +D H+I+LK S+R ++ SN ++
Sbjct: 684 LSMGFGFVEFRTKEQANAVISAMDGEVIDGHKIQLKLSHR----QSNNTSSHGSNKNSKS 739
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF FVEF+ EA+ A
Sbjct: 740 G-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKS--TRGFAFVEFLLPKEAEDA 796
Query: 745 MKALCQSTHLYGRRLVLEW 763
M L Q HL GRRLV+++
Sbjct: 797 MDQL-QGVHLLGRRLVMQY 814
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I ++GR+F+RN+ Y TE D LF +G L EV + +D T K+KGFA + F P+
Sbjct: 318 EKIGQTGRLFLRNILYNSTEQDFRDLFSPFGELEEVHIAVDIRTGKSKGFAYILFKNPKD 377
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A QAY LD +F GR+LH++PG+ K+N
Sbjct: 378 AIQAYIELDKQIFQGRLLHILPGESKKN 405
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 28/164 (17%)
Query: 246 KPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAAD 305
KP P T +G ++ F+ ++ N + S G+ ++ +K
Sbjct: 674 KPDPKREGHTLSMGFGFVEFRTKEQANAVI----SAMDGEVIDGHKIQ------------ 717
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
+K H +S S + ++SG+I V+NL + T D+ +LF +G L
Sbjct: 718 ---------LKLSHRQSNNTSSHGSNKNSKSGKIIVKNLPFEATRKDVFELFNSFGQLKS 768
Query: 366 VILPIDKETDK-TKGFALVTFLMPEHATQAYQHLDGTVFLGRML 408
V +P K+ DK T+GFA V FL+P+ A A L G LGR L
Sbjct: 769 VRVP--KKFDKSTRGFAFVEFLLPKEAEDAMDQLQGVHLLGRRL 810
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 121/330 (36%), Gaps = 85/330 (25%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLA------------SVRTTFLGMA 261
R I+VKN P G ++L F P LP A S R F +A
Sbjct: 508 RDDRVILVKNFPFGTNIEELGELFLPFGKLERLLLPPAGTIAIVQYKDIPSARAAFTKLA 567
Query: 262 YIGFKD--------EKNC-------NKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADD 306
Y FKD KNC ++A+ K + + +++ + N +K
Sbjct: 568 YKRFKDGIIYLEKGPKNCFARDATADEAMEKETAPAVEIKPSVHDIMEGNKSK------- 620
Query: 307 NNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEV 366
E + + +D++ + IFV+NL+++ T LT F+K+G V
Sbjct: 621 ------EEVSQDAHERDDDAID-----GPTVSIFVKNLNFSTTSVQLTDRFKKFGGF--V 667
Query: 367 ILPIDKETDKTK-------GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
+ + + D + GF V F E A +DG V G + L + N
Sbjct: 668 VAQVKTKPDPKREGHTLSMGFGFVEFRTKEQANAVISAMDGEVIDGHKIQLKLSHRQSNN 727
Query: 420 GNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV 479
+ G S + I+VKNLP+ D+ LF FG L V V
Sbjct: 728 TSSHGSNKNSKSGK----------------IIVKNLPFEATRKDVFELFNSFGQLKSVRV 771
Query: 480 P------PYGITGLVEFLQKNQAKAAFNSL 503
P G VEFL +A+ A + L
Sbjct: 772 PKKFDKSTRGF-AFVEFLLPKEAEDAMDQL 800
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TDV++ G+ RRFAFIG+ E A A++YFN +Y+ +++++V + D P+
Sbjct: 38 ITDVKILKDKNGQSRRFAFIGFRNEADAHDAVNYFNGSYINTAKLEVSMAKSFADPGVPQ 97
Query: 104 SWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDP 145
S + + AY+++ ++ + + ++ KK KN P
Sbjct: 98 SMREKKRE--AYKRMRE---REAQLAQEEESARANKKQKNVP 134
>gi|300120416|emb|CBK19970.2| unnamed protein product [Blastocystis hominis]
Length = 639
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 131/353 (37%), Positives = 203/353 (57%), Gaps = 37/353 (10%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS +IILVKNLPY +L +LF +G++ ++++P + LV F ++AK AFN L+
Sbjct: 289 RSDKIILVKNLPYTADRDELLSLFSQYGEVQQLVLPESHVMALVTFSVPSEAKRAFNRLS 348
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDN------ 558
Y K++ PLYLE+ P + + +S+ KN+ + K+ +A+++N
Sbjct: 349 YRKYQHTPLYLEYLPIAIGQQ--RRSQAAADSKNDNASKSMAAPSKQPSADDNNGNDKEA 406
Query: 559 ------------------QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRH 600
P ++ EE E +TT+YIKNLN+ +TE ++R+
Sbjct: 407 NSASQSSAFASNTLESSSSSSNPSKRDHAEE-AGGEDSSNTTIYIKNLNWKTTEAAVRKL 465
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
F + S+T+ +KK P G+ L MG+GF + TR +AL L +LD H ++L
Sbjct: 466 FNSVPGLKSITLPKKKTPS--GESLPMGFGFAVYETRAQALRALNQLSGKALDGHVLDLS 523
Query: 661 RSNRNLESEATTVKRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
S R+ TT KRK + A++ G +K+LVRN+PF+A +SE+ ELF +FG+LK +R
Sbjct: 524 FSARS--EIVTTKKRKLTARAEEDGEKRTKLLVRNVPFEASRSELRELFGSFGQLKSLRQ 581
Query: 718 PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNV 770
PKK G+ RGF FVE+++ ++AK A+KAL STHL GR+LV+E+A+E NV
Sbjct: 582 PKKFDGTS--RGFAFVEYVSSDDAKTAIKALA-STHLLGRKLVVEYAKEEANV 631
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 10/100 (10%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
EDI E GR+F++N+ Y+ E++L + +YG + +V +P++ + + +KG+A VTF+ PE
Sbjct: 101 EDIIEEGRLFLQNIPYSCKEEELREFISQYGEIVDVFIPLNSKRE-SKGYAFVTFMFPEQ 159
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCI 430
A A + LDG+VF GR+L + N NV K CI
Sbjct: 160 AIAAIEKLDGSVFQGRVLRV-------NVANV--KKESCI 190
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 123/556 (22%), Positives = 215/556 (38%), Gaps = 106/556 (19%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
Y +E+L+ + G + DV + ++ + + +AF+ + +QA AA++ + + VF
Sbjct: 116 YSCKEEELREFISQYGEIVDVFIPLNSKRESKGYAFVTFMFPEQAIAAIEKLDGS-VFQG 174
Query: 87 RIKVEKCSNLG-DTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDP 145
R+ +N+ ++ + Y + ++L + N+
Sbjct: 175 RVLRVNVANVKKESCIVRHAHTYKGEKYLARRLEEV---------------------NNT 213
Query: 146 TFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTA 205
+ L L+ V K++ S K G + + + ES N +++ E L+ K ++
Sbjct: 214 ASWNALYLNNDTVMKVI--SEKLGVKTSDILDVESGNMAVRVALAETEVLEDTKKWLESQ 271
Query: 206 PSDPSV-PPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTT 256
V V++ +R I+VKNLP + +L + F LP + V
Sbjct: 272 NVQIEVLEAVARGEPVQRSDKIILVKNLPYTADRDELLSLFSQYGEVQQLVLPESHV--- 328
Query: 257 FLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIY------------------KYSKDNSA 298
MA + F +A N+ S+ K + +Y DN++
Sbjct: 329 ---MALVTFSVPSEAKRAFNR-LSYRKYQHTPLYLEYLPIAIGQQRRSQAAADSKNDNAS 384
Query: 299 KYSGA------ADDNNN----------------ASMENIKAKHWKSQEDSVQFA--EDIA 334
K A ADDNN ++E+ + S+ D + A ED +
Sbjct: 385 KSMAAPSKQPSADDNNGNDKEANSASQSSAFASNTLESSSSSSNPSKRDHAEEAGGED-S 443
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK---GFALVTFLMPEHA 391
+ I+++NL++ TE + KLF L + LP K GF + A
Sbjct: 444 SNTTIYIKNLNWKTTEAAVRKLFNSVPGLKSITLPKKKTPSGESLPMGFGFAVYETRAQA 503
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-I 450
+A L G G +L L E +RKL A + E KR +
Sbjct: 504 LRALNQLSGKALDGHVLDLSFSARSE---------IVTTKKRKLTA--RAEEDGEKRTKL 552
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG------LVEFLQKNQAKAAFNSLA 504
LV+N+P+ ++L+ LF FG L + L P G VE++ + AK A +LA
Sbjct: 553 LVRNVPFEASRSELRELFGSFGQL-KSLRQPKKFDGTSRGFAFVEYVSSDDAKTAIKALA 611
Query: 505 YTKFKEVPLYLEWAPE 520
T L +E+A E
Sbjct: 612 STHLLGRKLVVEYAKE 627
>gi|341898155|gb|EGT54090.1| hypothetical protein CAEBREN_29703, partial [Caenorhabditis
brenneri]
Length = 466
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 199/350 (56%), Gaps = 41/350 (11%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYG-ITGLVEFLQ 492
KLDAF++ E RS +IL KNLP +L+ +FE FGD +VL+P G ++ LV
Sbjct: 121 KLDAFSKPAEKRSDTVILAKNLPAGVETEELQRMFEKFGDCQKVLMPSEGGVSALVIMGN 180
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
AK AF +LAY++F+ PLYLEWAP V A E G +++ EE ++ ++ K+E
Sbjct: 181 PVDAKKAFRALAYSRFRSQPLYLEWAPFDVLG-ATEPPVGTDQK--SEEPQKPKKSKREM 237
Query: 553 TAEE------DNQQGV--------------------PEVEEN-----VEEDEEREPEPDT 581
T EE + QQG+ PE E ++ E+E E +
Sbjct: 238 TYEEKKKERKNRQQGITEEDEEREGEEDEGETEDKKPETSETKPKKASKKQSEKEIESGS 297
Query: 582 TLYIKNLNFNSTEDSIRRHFKK--CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
+++KNL F++T+D + F+K + S +++K +P P + LSMG+GFVQFYT
Sbjct: 298 AIFVKNLAFDTTDDGLDSLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFYTSLD 357
Query: 640 LNQALKVLQNSSLDEHQIELKRSNR-NLESEATTVKRKSSNVAKQT-GSKILVRNIPFQA 697
QALK +Q LD H +ELK S+R N++ A +KRK Q +K+LVRN+PF+A
Sbjct: 358 AKQALKEMQGELLDGHSLELKISHRENVDKGA--LKRKEIRQKDQGECTKLLVRNLPFEA 415
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
EVE LF+ FG +K +R+P+K HRGFGFV+FI+ +EA+RA A
Sbjct: 416 SIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISADEARRAFDA 465
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 25/189 (13%)
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEK-YGPLAEV------ILPIDKETDKTKGF 380
Q ++I IFV+NL++ T+D L LF K YG L + + P + + GF
Sbjct: 288 QSEKEIESGSAIFVKNLAFDTTDDGLDSLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGF 347
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQ 440
V F A QA + + G + G L L K E NVD + +++ +Q
Sbjct: 348 GFVQFYTSLDAKQALKEMQGELLDGHSLEL---KISHRE-NVD---KGALKRKEIRQKDQ 400
Query: 441 VVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQK 493
+ +LV+NLP+ +++ LFE FG + + +P + G V+F+
Sbjct: 401 GECTK----LLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISA 456
Query: 494 NQAKAAFNS 502
++A+ AF++
Sbjct: 457 DEARRAFDA 465
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 667 ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELF-KAFGEL-KFVRLPKKMVGS 724
E++ +K S ++GS I V+N+ F ++ LF K +G+L K ++ KK+ +
Sbjct: 278 ETKPKKASKKQSEKEIESGSAIFVKNLAFDTTDDGLDSLFRKRYGDLVKSAQISKKLNPA 337
Query: 725 ----GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
L GFGFV+F T +AK+A+K + Q L G L L
Sbjct: 338 EPTKPLSMGFGFVQFYTSLDAKQALKEM-QGELLDGHSLEL 377
>gi|126275158|ref|XP_001386803.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126212672|gb|EAZ62780.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 838
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 191/349 (54%), Gaps = 21/349 (6%)
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
E +V G V +R +D + R ++ILVKN PY T ++ +F +G L R+L
Sbjct: 462 EAHVIGDVRKYFEDRGVDLTTFDRKERDDKVILVKNFPYGTTIEEIGEMFTQYGSLKRML 521
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN 538
+PP G +VEF A+AAF LAY +FK+ +YLE P+ +F +E S + +K
Sbjct: 522 MPPAGTIAIVEFRDAPAARAAFTKLAYRRFKKSIIYLEKGPKDLF--TREPSVHETVDK- 578
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSI 597
+E+ EN E E + E E+ E E P ++++KNLNF +T +
Sbjct: 579 --------QEQIENAVEVKVTASDVLGESSKNEQEQNEIEGPTVSIFVKNLNFATTALQL 630
Query: 598 RRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQI 657
F T+ K DPK+ G LSMG+GFV+F T+E N A+ L L+ H++
Sbjct: 631 TELFNPLAGFVVATIKTKPDPKNSGGVLSMGFGFVEFRTKEQANAAISALDGHVLEGHKL 690
Query: 658 ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
+LK S+R S A S +K +KI+++N+PF+A + ++ ELF AFG+LK VR+
Sbjct: 691 QLKLSHRQGGSSA------GSKTSKSGSNKIIIKNLPFEATRKDILELFGAFGQLKSVRV 744
Query: 718 PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
PKK S RGF FVEF EA+ AM L + HL GRRLV+++AE+
Sbjct: 745 PKKFDKSA--RGFAFVEFNLLKEAENAMNQL-EGVHLLGRRLVMQYAEQ 790
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
A IA +GR+F+RN+ YT TE + LFE+YGPL EV + +D T K+KGF V F
Sbjct: 301 AAKIAVTGRLFIRNILYTSTEAEFRDLFEQYGPLQEVHIAVDTRTGKSKGFVYVQFENSS 360
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A QAY+ LD +F GR+LH++PG+ K++
Sbjct: 361 DAVQAYEALDKQIFQGRLLHILPGEKKKD 389
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+++L+ F ++G VTDV+L G+ RRFAF+GY + A+ A +FN +++ ++RI
Sbjct: 14 TEDKLREFFGKQGDVTDVKLMKKRNGESRRFAFVGYKSFEDAEKAASFFNKSFIDTARID 73
Query: 90 VEKCSNLGDTTKPKSW 105
VE D P S+
Sbjct: 74 VELAKTFSDPNVPMSF 89
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 80/198 (40%), Gaps = 43/198 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK------------GFALVTFL 386
IFV+NL++ T LT+LF PLA ++ T KTK GF V F
Sbjct: 616 IFVKNLNFATTALQLTELF---NPLAGFVVA----TIKTKPDPKNSGGVLSMGFGFVEFR 668
Query: 387 MPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARS 446
E A A LDG V G L L K +G A ++ ++ S
Sbjct: 669 TKEQANAAISALDGHVLEGHKLQL---KLSHRQGGS-------------SAGSKTSKSGS 712
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAF 500
+II +KNLP+ D+ LF FG L V VP G VEF +A+ A
Sbjct: 713 NKII-IKNLPFEATRKDILELFGAFGQLKSVRVPKKFDKSARGF-AFVEFNLLKEAENAM 770
Query: 501 NSLAYTKFKEVPLYLEWA 518
N L L +++A
Sbjct: 771 NQLEGVHLLGRRLVMQYA 788
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 42/199 (21%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
+I VKNL L F PL +A+++T +G ++ F+ ++ N
Sbjct: 615 SIFVKNLNFATTALQLTELFNPLAGFVVATIKTKPDPKNSGGVLSMGFGFVEFRTKEQAN 674
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
A+ S G L +K S + G++ + +
Sbjct: 675 AAI----SALDGHVLEGHKLQLKLSHRQGGSSAGSKTSK--------------------- 709
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
+ S +I ++NL + T D+ +LF +G L V +P K+ DK+ +GFA V F + + A
Sbjct: 710 -SGSNKIIIKNLPFEATRKDILELFGAFGQLKSVRVP--KKFDKSARGFAFVEFNLLKEA 766
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A L+G LGR L +
Sbjct: 767 ENAMNQLEGVHLLGRRLVM 785
>gi|401888739|gb|EJT52690.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 2479]
Length = 1040
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 185/341 (54%), Gaps = 23/341 (6%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS+ ILVKN+P+ T T L+ LF P GDL RVL+PP G G+VEF+ A AF +LA
Sbjct: 687 RSQTTILVKNIPFGTTITQLQDLFAPHGDLKRVLLPPAGTIGVVEFVNNMDAGRAFKALA 746
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + LYLE P G+F K+ N + ++ E V E
Sbjct: 747 YRRLGNSVLYLEKGPVGMF-----------KDPNAISTPAAKAAEERAKLTEK----VAE 791
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
E + + + E TL++KNL + +T +++ + V K DPK PG
Sbjct: 792 AEATLRDKPDESDEAGATLFLKNLAWATTNETLASVLSSLPGYSFSRVQTKPDPKRPGAR 851
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
LSMGYGFV F T++ AL L+ +D H IE K + R + E + S K
Sbjct: 852 LSMGYGFVGFKTKKEAQAALAGLEGFKIDGHAIEAKFAQRG-QDEVEKKHKTKSEEGKTK 910
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK--MVGSGLH--RGFGFVEFITKNE 740
G+K+LV+N+PF+A + +V LF A+G LK +R+P+K M +G RGF F+EF T E
Sbjct: 911 GTKLLVKNLPFEATKKDVRALFSAYGTLKSLRVPRKSTMSATGAQSTRGFAFLEFTTHAE 970
Query: 741 AKRAMKALCQSTHLYGRRLVLEWAEEAD--NVEDIRKRTNR 779
A+RAM AL + THL GR LV EWA++ D +V+ +R++ +R
Sbjct: 971 AQRAMDAL-KHTHLLGRHLVTEWAKDEDSVDVDALREKVSR 1010
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I +GR+FVRNL++ T DD+ FEK+GP+ +V +P+ T + G A V F P +A
Sbjct: 489 ILSTGRLFVRNLAFVATADDIKAHFEKFGPIVDVHMPVSHSTGEPLGTAFVLFRDPNNAL 548
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENE-------GNVDGKVHCCISERK 434
A Q LD T F GR+LH++PG+ + + G +DGKV +E +
Sbjct: 549 SARQSLDKTTFQGRLLHVLPGRARPGQENASGVAGIIDGKVLGKATEAR 597
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 137/393 (34%), Gaps = 107/393 (27%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNS 502
+ V+NL + D+KA FE FG + V +P P G T V F N A +A S
Sbjct: 495 LFVRNLAFVATADDIKAHFEKFGPIVDVHMPVSHSTGEPLG-TAFVLFRDPNNALSARQS 553
Query: 503 LAYTKFKEVPLYL--------EWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
L T F+ L++ + GV K GK E E + +E++K ++A
Sbjct: 554 LDKTTFQGRLLHVLPGRARPGQENASGVAGIIDGKVLGKATEARGEVKQRQDEKRKADSA 613
Query: 555 EEDN-------------------------------------------QQGVPEVEENVEE 571
N Q + E + + E
Sbjct: 614 RGVNWATLYMNADAVAASVAKRMGVSKSELLDGSDDMSPAVKLALAETQVIAETKAHFEN 673
Query: 572 D-------EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
+ + R P TT+ +KN+ F +T ++ F G + V + P
Sbjct: 674 EGIVLDSLQPRVPRSQTTILVKNIPFGTTITQLQDLFAPHGDLKRVLL-------PPAGT 726
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNL------------------ 666
+ G V+F +A K L L + L++ +
Sbjct: 727 I----GVVEFVNNMDAGRAFKALAYRRLGNSVLYLEKGPVGMFKDPNAISTPAAKAAEER 782
Query: 667 ------ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL--- 717
+EA R + + + G+ + ++N+ + + + + F R+
Sbjct: 783 AKLTEKVAEAEATLRDKPDESDEAGATLFLKNLAWATTNETLASVLSSLPGYSFSRVQTK 842
Query: 718 --PKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
PK+ G+ L G+GFV F TK EA+ A+ L
Sbjct: 843 PDPKR-PGARLSMGYGFVGFKTKKEAQAALAGL 874
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 126/294 (42%), Gaps = 38/294 (12%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF-SSR 87
I+ E K+K E T+ V + T RRFAF+G+ ++ A ++FN ++VF +
Sbjct: 314 ISPEAFKSKLTEPKTLQSVVVTDTKVVAKRRFAFVGFRTDEDAAKVKEWFNGSFVFGGGK 373
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEH--TKDSKPGKKSKNDP 145
+KVE S + PK + QK K D K E T+++ P K+ K
Sbjct: 374 VKVEFVSE--EPLAPK---------AKRQKTD----KHDKKAEDVTTEEAGPSKQYKE-- 416
Query: 146 TFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKL-KTKSKDT 204
F D ++ ++ + +K +E I D D + L K K+
Sbjct: 417 -FMDVMKGTDGATAESSTTAQAKASKKGKEKATPEPEVIPADDEDDDDAAWLAKRKAALD 475
Query: 205 APSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTT 256
DP+V P + + + V+NL D+KA+F+ +P++
Sbjct: 476 GDEDPNVDPEDAMILSTGR---LFVRNLAFVATADDIKAHFEKFGPIVDVHMPVSHSTGE 532
Query: 257 FLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIY----KYSKDNSAKYSGAAD 305
LG A++ F+D N A +K+ ++G+ L++ + ++N++ +G D
Sbjct: 533 PLGTAFVLFRDPNNALSARQSLDKTTFQGRLLHVLPGRARPGQENASGVAGIID 586
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 41/204 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
T+ +KNL + L + LP + V+T +G ++GFK +K
Sbjct: 809 TLFLKNLAWATTNETLASVLSSLPGYSFSRVQTKPDPKRPGARLSMGYGFVGFKTKKEAQ 868
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
AL + F I ++ + AK++ D ++ KH E E
Sbjct: 869 AALAGLEGF------KIDGHAIE--AKFAQRGQDE-------VEKKHKTKSE------EG 907
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE-----TDKTKGFALVTFLM 387
+ ++ V+NL + T+ D+ LF YG L + +P T+GFA + F
Sbjct: 908 KTKGTKLLVKNLPFEATKKDVRALFSAYGTLKSLRVPRKSTMSATGAQSTRGFAFLEFTT 967
Query: 388 PEHATQAYQHLDGTVFLGRMLHLI 411
A +A L T LGR HL+
Sbjct: 968 HAEAQRAMDALKHTHLLGR--HLV 989
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 524 AEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTT- 582
A+AK KGKEK E E ++E ++ A ++ + +E+ D E T
Sbjct: 435 AQAKASKKGKEKATPEPEVIPADDEDDDDAAWLAKRKAALDGDEDPNVDPEDAMILSTGR 494
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+++NL F +T D I+ HF+K GPI V + P +G FV F N
Sbjct: 495 LFVRNLAFVATADDIKAHFEKFGPIVDVHMPVSHSTGEP-----LGTAFVLF---RDPNN 546
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
AL Q SLD+ + R L A + +S VA K+L
Sbjct: 547 ALSARQ--SLDKTTFQ-GRLLHVLPGRARPGQENASGVAGIIDGKVL 590
>gi|255716874|ref|XP_002554718.1| KLTH0F11968p [Lachancea thermotolerans]
gi|238936101|emb|CAR24281.1| KLTH0F11968p [Lachancea thermotolerans CBS 6340]
Length = 879
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 196/346 (56%), Gaps = 32/346 (9%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R ++LVKN P+ T ++L LF PFG L R+L+PP +V++ A+AAF L+
Sbjct: 519 RDDTVLLVKNFPFGTTHSELAELFLPFGKLLRLLLPPAQTIAVVQYRDATSARAAFTKLS 578
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG---EEEKKENTAEEDNQQG 561
Y +FK+ LYLE P+G F K + EG+E EE + TA E G
Sbjct: 579 YKRFKDGILYLEKGPKGCF-------------KRDPEGDEIVDLHEEPQSATAREARATG 625
Query: 562 --VPEVEENVEEDEEREPE----PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARK 615
+ EV+++ ++DE+ + P ++++KNLNF++T + FK V K
Sbjct: 626 DEIMEVDKDDKQDEDGTDDVLDGPTVSIFVKNLNFSTTTKELTEKFKPFSGFVVAQVKTK 685
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR 675
DPK+ + LSMG+GF +F T+E + L + LD H+I+LK S+R + T+ +
Sbjct: 686 PDPKNANKTLSMGFGFAEFKTKEQAVAVIDALDGAVLDGHRIQLKLSHRQGSAAPTSGQS 745
Query: 676 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
K K++ KI+V+N+PF+A++ +V ELF +FG+LK VR+PKK S RGF FVEF
Sbjct: 746 K-----KKSSGKIVVKNLPFEAERKQVFELFSSFGQLKSVRVPKKFDKS--TRGFAFVEF 798
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEWAEE--ADNVEDIRKRTNR 779
+ EA+ AM+ L Q HL GRRLV++ AE+ D E I + T +
Sbjct: 799 LLPKEAENAMEQL-QGVHLLGRRLVMQHAEQEPQDAEEQIARMTKK 843
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%)
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
+F + I +GR+F+RN+ YT TE+D L +G L EV + +D T K+KGFA V F
Sbjct: 326 KFIQKIRTTGRLFLRNILYTATEEDFKGLLAPFGELEEVHVALDTRTGKSKGFAYVMFRN 385
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
PE A AY LD +F GR+LH++P K++
Sbjct: 386 PEDAVNAYVELDKHIFQGRLLHILPADAKKS 416
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 94/224 (41%), Gaps = 30/224 (13%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRTTFLGMAYIGFKDEKNCNKALNKNKSF- 281
+I VKNL K+L FKP +A V+T D KN NK L+ F
Sbjct: 652 SIFVKNLNFSTTTKELTEKFKPFSGFVVAQVKTK---------PDPKNANKTLSMGFGFA 702
Query: 282 -WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIF 340
+K K+ + GA D + +K H + SG+I
Sbjct: 703 EFKTKEQAVAVIDA-----LDGAVLDGHRI---QLKLSHRQGSAAPTSGQSKKKSSGKIV 754
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-TKGFALVTFLMPEHATQAYQHLD 399
V+NL + + +LF +G L V +P K+ DK T+GFA V FL+P+ A A + L
Sbjct: 755 VKNLPFEAERKQVFELFSSFGQLKSVRVP--KKFDKSTRGFAFVEFLLPKEAENAMEQLQ 812
Query: 400 GTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAF 438
G LGR L + P +E + KV ++ ++L A
Sbjct: 813 GVHLLGRRLVMQHAEQEPQDAEEQIARMTKKVRSQVATQELAAL 856
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 124/322 (38%), Gaps = 69/322 (21%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLA------------SVRTTFLGMA 261
R ++VKN P G +L F P LP A S R F ++
Sbjct: 519 RDDTVLLVKNFPFGTTHSELAELFLPFGKLLRLLLPPAQTIAVVQYRDATSARAAFTKLS 578
Query: 262 YIGFKD-----EKNCNKALNKNKSFWKGKQL-NIYKYSKDNSAKYSGAADDNNNASMENI 315
Y FKD EK ++ +G ++ ++++ + +A+ + A D ME
Sbjct: 579 YKRFKDGILYLEKGPKGCFKRDP---EGDEIVDLHEEPQSATAREARATGDE---IME-- 630
Query: 316 KAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL------P 369
K K ED D + IFV+NL+++ T +LT EK+ P + ++ P
Sbjct: 631 VDKDDKQDEDGTDDVLD-GPTVSIFVKNLNFSTTTKELT---EKFKPFSGFVVAQVKTKP 686
Query: 370 IDKETDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVH 427
K +KT GF F E A LDG V G + L + + G+
Sbjct: 687 DPKNANKTLSMGFGFAEFKTKEQAVAVIDALDGAVLDGHRIQLKLSHRQGSAAPTSGQ-- 744
Query: 428 CCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------P 481
S++K S I+VKNLP+ + LF FG L V VP
Sbjct: 745 ---SKKK-----------SSGKIVVKNLPFEAERKQVFELFSSFGQLKSVRVPKKFDKST 790
Query: 482 YGITGLVEFLQKNQAKAAFNSL 503
G VEFL +A+ A L
Sbjct: 791 RGF-AFVEFLLPKEAENAMEQL 811
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 29 ITQEQLKAKFEE------KGT-----VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDY 77
+T +QLK F + KG +TDV++ G+ RRFAF+G+ E+ A A++Y
Sbjct: 13 LTDDQLKDHFSKRLAHLHKGADVTEAITDVKILKNRAGESRRFAFVGFRSEEDAFDAVNY 72
Query: 78 FNNTYVFSSRIKVEKCSNLGDTTKPK 103
F+ +++ + +I+V + D P+
Sbjct: 73 FDQSFIHTCKIEVTMAKSFADPRVPQ 98
>gi|26343509|dbj|BAC35411.1| unnamed protein product [Mus musculus]
Length = 521
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 151/479 (31%), Positives = 231/479 (48%), Gaps = 111/479 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQAAL++F+ +++ ++RI
Sbjct: 13 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQAALNHFHRSFIDTTRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG------KKSK 142
VE C + GD +KP++WSK+A SS ++ P QD P TK K +K K
Sbjct: 73 TVEFCKSFGDPSKPRAWSKHAQKSSQPKQ-----PSQDSVPSDTKKDKKKKGPSDLEKLK 127
Query: 143 NDPTFSDFLQLHGK----------DVSKLLPL---------------SNKD-GEEKEEE- 175
D F +FL +H K + LP SN D G+E EEE
Sbjct: 128 EDAKFQEFLSIHQKRTQVATWANDALEAKLPKAKTKASSDYLNFDSDSNSDSGQESEEEP 187
Query: 176 -NEDESNNQ------IAHADISDMEYLKLKTKSKDTA----------------------- 205
ED Q ++SDM+YLK K + +
Sbjct: 188 AREDPEEEQGLQPKAAVQKELSDMDYLKSKMVRAEVSSEDEDEEDSEDEAVNCEEGSEEE 247
Query: 206 -----PSDPS---------VPPVSKA---------PVHKRQY---HTIVVKNLPAGVKKK 239
P+ P+ VP V + PV +++ +T+ ++ P V +K
Sbjct: 248 EEEGSPASPAKQGGVSRGAVPGVLRPQEAAGKVEKPVSQKEPTTPYTVKLRGAPFNVTEK 307
Query: 240 DLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
++ + PL ++R G ++ E+ KAL N+ + G+ + +++
Sbjct: 308 NVIEFLAPLKPVAIRIVRNAHGNKTGYVFVDLSSEEEVKKALKCNRDYMGGRYIEVFREK 367
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDL 353
+ +A+ S + + E+ ED+A+SGR+FVRNLSYT +E+DL
Sbjct: 368 QAPTAR-------GPPKSTTPWQGRTLGENEEE----EDLADSGRLFVRNLSYTSSEEDL 416
Query: 354 TKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
KLF YGPL+E+ PID T K KGFA VTF+ PEHA +AY +DG VF GRMLH++P
Sbjct: 417 EKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLP 475
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 32/201 (15%)
Query: 559 QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
Q+ +VE+ V + +EP T+ ++ FN TE ++ P+A V
Sbjct: 274 QEAAGKVEKPVSQ---KEPTTPYTVKLRGAPFNVTEKNVIEFLAPLKPVAIRIVRNAHGN 330
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSS 678
K+ GY FV + E + +ALK ++ + IE+ R E +A T +
Sbjct: 331 KT-------GYVFVDLSSEEEVKKALKCNRDY-MGGRYIEVFR-----EKQAPTARGPPK 377
Query: 679 NVAKQTG---------------SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG 723
+ G ++ VRN+ + + + ++E+LF A+G L + P +
Sbjct: 378 STTPWQGRTLGENEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSL- 436
Query: 724 SGLHRGFGFVEFITKNEAKRA 744
+ +GF FV F+ A +A
Sbjct: 437 TKKPKGFAFVTFMFPEHAVKA 457
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQAAL 59
>gi|70990768|ref|XP_750233.1| pre-rRNA processing protein Mrd1 [Aspergillus fumigatus Af293]
gi|74669789|sp|Q4WJT7.1|MRD1_ASPFU RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|66847865|gb|EAL88195.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
Af293]
Length = 825
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 188/337 (55%), Gaps = 35/337 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF Q R ILVKN Y DL+ LFEP+G + R+L+PP G +VEF + +
Sbjct: 473 LDAFKQ--RERGNTAILVKNFSYGVKVDDLRKLFEPYGQITRLLMPPSGTIAIVEFARPD 530
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVF--AEAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
+A+ AF LAY K + L+LE AP +F A + S + K +
Sbjct: 531 EAQKAFKGLAYRKVGDSILFLEKAPANLFDATTAPQTSVLETKAVS-------------- 576
Query: 553 TAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
QG + ED + EP +TL++KNLNF++T + FK S +
Sbjct: 577 -------QGFSTADTFAAEDGD-EPVVTSTLFVKNLNFSTTNERFTEVFKPLDGFVSARI 628
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
K DPK PG+ LSMG+GFV F T+ AL + LD+H++ ++ SN+ +++
Sbjct: 629 KTKPDPKRPGKTLSMGFGFVDFRTKAQAQAALAAMDGYKLDQHELVVRASNKAMDAAE-- 686
Query: 673 VKRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
+R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RG
Sbjct: 687 -ERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RG 743
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
FGF +F++ EA+ AM AL ++THL GRRLVLE+A E
Sbjct: 744 FGFADFVSAREAENAMDAL-KNTHLLGRRLVLEFANE 779
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I S R+FVRNL Y +E DL +F K+G + E+ + D + +KGFA V ++ P+
Sbjct: 295 EHIRLSSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDA 354
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A QAY+ LDG F GR++H++P K
Sbjct: 355 AVQAYKELDGKHFQGRLMHILPATAK 380
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 147/369 (39%), Gaps = 74/369 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N SY V DDL KLFE YG + +++P + A+V F P+ A +A++ L
Sbjct: 486 ILVKNFSYGVKVDDLRKLFEPYGQITRLLMP------PSGTIAIVEFARPDEAQKAFKGL 539
Query: 399 ------DGTVFLGRM-LHLIPGKPKENEGNVDGK-VHCCISERKLDAFNQVVEARSKRII 450
D +FL + +L ++ K V S A E +
Sbjct: 540 AYRKVGDSILFLEKAPANLFDATTAPQTSVLETKAVSQGFSTADTFAAEDGDEPVVTSTL 599
Query: 451 LVKNLPYRTLPTDLKALFEPFGDL--GRVLVPP----YGIT-----GLVEFLQKNQAKAA 499
VKNL + T +F+P R+ P G T G V+F K QA+AA
Sbjct: 600 FVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRTKAQAQAA 659
Query: 500 FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQ 559
++ K + L + + + + A EE ++E+TA++
Sbjct: 660 LAAMDGYKLDQHELVVRASNKAMDA--------------------AEERRREDTAKKIAA 699
Query: 560 QGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
+ T + IKNL F +T+ +R F G + SV V +K D
Sbjct: 700 RR-------------------TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRS 740
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN 679
+ G+GF F + A+ L+N+ L ++ L+ +N EA +++
Sbjct: 741 ------ARGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFAN----EEAVDPEQEIEQ 790
Query: 680 VAKQTGSKI 688
+ K+ G ++
Sbjct: 791 IEKKVGEQL 799
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 310 ASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP 369
AS + + A + +ED+ + + A +I ++NL + T+ D+ LF YG L V +P
Sbjct: 677 ASNKAMDAAEERRREDTAK--KIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP 734
Query: 370 IDKETDKT-KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
K+ D++ +GF F+ A A L T LGR L L
Sbjct: 735 --KKFDRSARGFGFADFVSAREAENAMDALKNTHLLGRRLVL 774
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S++ VRN+P+ A +S++E +F FG+++ + + S +GF +V++I + A +A
Sbjct: 301 SRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFD-TRSTTSKGFAYVQYIEPDAAVQAY 359
Query: 746 KALCQSTHLYGRRL 759
K L H GR +
Sbjct: 360 KEL-DGKHFQGRLM 372
>gi|406697498|gb|EKD00757.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 1039
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 185/341 (54%), Gaps = 23/341 (6%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS+ ILVKN+P+ T T L+ LF P GDL RVL+PP G G+VEF+ A AF +LA
Sbjct: 686 RSQTTILVKNIPFGTTITQLQDLFAPHGDLKRVLLPPAGTIGVVEFVNNMDAGRAFKALA 745
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + LYLE P G+F K+ N + ++ E V E
Sbjct: 746 YRRLGNSVLYLEKGPVGMF-----------KDPNAISTPAAKAAEERAKLTEK----VAE 790
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
E + + + E TL++KNL + +T +++ + V K DPK PG
Sbjct: 791 AEATLRDKPDESDEAGATLFLKNLAWATTNETLASVLSSLPGYSFSRVQTKPDPKRPGAR 850
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
LSMGYGFV F T++ AL L+ +D H IE K + R + E + S K
Sbjct: 851 LSMGYGFVGFKTKKEAQAALAGLEGFKIDGHAIEAKFAQRG-QDEVEKEHKTKSEEGKTK 909
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK--MVGSGLH--RGFGFVEFITKNE 740
G+K+LV+N+PF+A + +V LF A+G LK +R+P+K M +G RGF F+EF T E
Sbjct: 910 GTKLLVKNLPFEATKKDVRALFSAYGTLKSLRVPRKSTMSATGAQSTRGFAFLEFTTHAE 969
Query: 741 AKRAMKALCQSTHLYGRRLVLEWAEEAD--NVEDIRKRTNR 779
A+RAM AL + THL GR LV EWA++ D +V+ +R++ +R
Sbjct: 970 AQRAMDAL-KHTHLLGRHLVTEWAKDEDSVDVDALREKVSR 1009
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I +GR+FVRNL++ T DD+ FEKYGP+ +V +P+ T + G A V F P +A
Sbjct: 488 ILNTGRLFVRNLAFVATADDIKAHFEKYGPIVDVHMPVSHSTGEPLGTAFVLFRDPNNAL 547
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENE-------GNVDGKVHCCISERK 434
A Q LD T F GR+LH++PG+ + + G +DGKV +E +
Sbjct: 548 SARQSLDKTTFQGRLLHVLPGRARPGQENASGVAGIIDGKVLGKATEAR 596
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 119/315 (37%), Gaps = 78/315 (24%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNS 502
+ V+NL + D+KA FE +G + V +P P G T V F N A +A S
Sbjct: 494 LFVRNLAFVATADDIKAHFEKYGPIVDVHMPVSHSTGEPLG-TAFVLFRDPNNALSARQS 552
Query: 503 LAYTKFKEVPLYL--------EWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
L T F+ L++ + GV K GK E E + +E++K ++A
Sbjct: 553 LDKTTFQGRLLHVLPGRARPGQENASGVAGIIDGKVLGKATEARGEVKQRQDEKRKADSA 612
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
N TLY +N ++ S+ K+ G ++ +
Sbjct: 613 RGVNW---------------------ATLY---MNADAVAASVA---KRMG-VSKSELLD 644
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
D SP L++ V T+ + LD Q + RS
Sbjct: 645 GSDDMSPAVKLALAETQVIAETKAYFEN-----EGIVLDSLQPRVPRSQ----------- 688
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
+ ILV+NIPF +++++LF G+LK V LP G VE
Sbjct: 689 -----------TTILVKNIPFGTTITQLQDLFAPHGDLKRVLLPPAGT-------IGVVE 730
Query: 735 FITKNEAKRAMKALC 749
F+ +A RA KAL
Sbjct: 731 FVNNMDAGRAFKALA 745
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF-SSR 87
I+ E K+K E T+ V + T RRFAF+G+ ++ A ++FN ++VF +
Sbjct: 310 ISPEAFKSKLTEPKTLQSVVVTDTKVVAKRRFAFVGFRTDEDAAKVKEWFNGSFVFGGGK 369
Query: 88 IKVEKCS 94
+KVE S
Sbjct: 370 VKVEFVS 376
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 79/210 (37%), Gaps = 53/210 (25%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
T+ +KNL + L + LP + V+T +G ++GFK +K
Sbjct: 808 TLFLKNLAWATTNETLASVLSSLPGYSFSRVQTKPDPKRPGARLSMGYGFVGFKTKKEAQ 867
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQ---- 328
AL + F K G A I+AK + +D V+
Sbjct: 868 AALAGLEGF-----------------KIDGHA----------IEAKFAQRGQDEVEKEHK 900
Query: 329 --FAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE-----TDKTKGFA 381
E + ++ V+NL + T+ D+ LF YG L + +P T+GFA
Sbjct: 901 TKSEEGKTKGTKLLVKNLPFEATKKDVRALFSAYGTLKSLRVPRKSTMSATGAQSTRGFA 960
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLI 411
+ F A +A L T LGR HL+
Sbjct: 961 FLEFTTHAEAQRAMDALKHTHLLGR--HLV 988
>gi|402592999|gb|EJW86926.1| RNA recognition domain-containing protein [Wuchereria bancrofti]
Length = 890
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 213/395 (53%), Gaps = 60/395 (15%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E+L+ F+ G +TD LKYT +GKFRRFAF+G+ ++ AQ A D ++ ++ +SR+
Sbjct: 14 TEEKLRNHFKSFGKITDCSLKYTRDGKFRRFAFVGFETDENAQKARDNLHSAFMGTSRLT 73
Query: 90 VEKCSNLGDTTKPKSWSKYAPDSSAYQKLH-NIAPKQDLKPEHTKDSKPGKK---SKNDP 145
VE+C GD TKP++WSKYA SSAY++LH ++ K + S P K +ND
Sbjct: 74 VEECKPFGDETKPRAWSKYAKGSSAYKRLHPKEEEEKTKKIISVRGSSPSAKKMRKENDK 133
Query: 146 TFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTA 205
F DF+++ LP+ +++ + + ME L L S DT+
Sbjct: 134 EFYDFIEVQ----KSALPV---------------ASSSNDENNNNLMEEL-LSGVSGDTS 173
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS---VRTTFLGMAY 262
S ++++ LP VK K +K +F P+ L VR + +A+
Sbjct: 174 LS-------------------LIIRGLPKTVKTKGIKDWFSPVKLKGIKIVRGSAEAIAF 214
Query: 263 IGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKS 322
+ F E + KAL +N+ F+ G +L I K +N S E+++ +
Sbjct: 215 VTFFKESDVKKALKRNEQFFGGSKLEIAKVL-------------SNRFSDEDVEDYVHMT 261
Query: 323 QEDSVQFA-EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFA 381
+E V+ + I E+GR+FVRNL Y +++DL LF+KYG ++++ + + K+T KGFA
Sbjct: 262 REAEVEASVAKILETGRLFVRNLPYVCSDEDLRYLFKKYGEISDLQMIVSKKTGLCKGFA 321
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
+VT++ PE A A+ LDG++ GRMLH++PG+ K
Sbjct: 322 IVTYVFPESAVAAFSALDGSILKGRMLHILPGEEK 356
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 148/245 (60%), Gaps = 13/245 (5%)
Query: 543 EEGEEEKKENTAEEDNQQGVPEVEENVEE-------DEEREPE----PDTTLYIKNLNFN 591
E E K E A++ Q EVE + E D +E + P TTL++KNL+F
Sbjct: 616 ESVETVKSETIAKDGGMQRQAEVEMQIAEIRNDDGDDNAKEKDDQLLPGTTLFVKNLSFK 675
Query: 592 STEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
+T++ +R F+ + S TV++K+D + LSMG+GF+ FY E QA+K +Q
Sbjct: 676 TTDEGLRNKFESRFRVRSATVSKKRDATDATKALSMGFGFITFYQPEDAQQAIKDMQGVL 735
Query: 652 LDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGE 711
LD H + LK S+R + S+ ++ + + +KIL+RNIPFQA + EV++LF FGE
Sbjct: 736 LDGHCLMLKLSHREVVSDKIIARKGVDKLEQGEATKILIRNIPFQATRKEVKQLFATFGE 795
Query: 712 LKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVE 771
++ R+PKK HRGFGFV+F+T+ +A+RA L STH YGRRLVLEWA+ N+E
Sbjct: 796 IRAFRMPKKAAEG--HRGFGFVDFLTRADARRAFNGLVHSTHFYGRRLVLEWAKPDSNLE 853
Query: 772 DIRKR 776
++R++
Sbjct: 854 ELREK 858
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 162/340 (47%), Gaps = 51/340 (15%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD F++ RS +I++KNL + +LK +F G + ++L+PP G+T ++E
Sbjct: 448 LDVFSRPAAKRSNTVIIIKNLTTKVDTEELKRMFARHGPVKQLLMPPGGVTAILEMENPV 507
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT- 553
A+ AFN+LAYT+F+ PL+LEWAP +F K +S ++++++ E + E+K+N
Sbjct: 508 DAQKAFNTLAYTRFRSQPLFLEWAPYDLFKLRKLESNDEDQKQHR---PEIQTERKDNEF 564
Query: 554 AEEDNQQGVPE----VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIAS 609
+ED + + +E+ VE E + E T + +KN+ S ++ I+ F + S
Sbjct: 565 IKEDKKLRRSKKHRLIEKPVEVTELQ--EKGTKILVKNI-ITSPQECIKLLF----SVES 617
Query: 610 V-TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES 668
V TV + K G +Q + E QI R++ ++
Sbjct: 618 VETVKSETIAKDGG------------------------MQRQAEVEMQIAEIRNDDGDDN 653
Query: 669 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS---- 724
K K + G+ + V+N+ F+ + F++ ++ + KK +
Sbjct: 654 ----AKEKDDQLL--PGTTLFVKNLSFKTTDEGLRNKFESRFRVRSATVSKKRDATDATK 707
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
L GFGF+ F +A++A+K + Q L G L+L+ +
Sbjct: 708 ALSMGFGFITFYQPEDAQQAIKDM-QGVLLDGHCLMLKLS 746
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 339 IFVRNLSYTVTEDDLTKLFE-KYGPLAEVILPIDKETDKTK----GFALVTFLMPEHATQ 393
+FV+NLS+ T++ L FE ++ + + TD TK GF +TF PE A Q
Sbjct: 667 LFVKNLSFKTTDEGLRNKFESRFRVRSATVSKKRDATDATKALSMGFGFITFYQPEDAQQ 726
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + + G + G L L K E D I+ + +D Q + IL++
Sbjct: 727 AIKDMQGVLLDGHCLML---KLSHREVVSDK----IIARKGVDKLEQGEATK----ILIR 775
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAY-TK 507
N+P++ ++K LF FG++ +P G V+FL + A+ AFN L + T
Sbjct: 776 NIPFQATRKEVKQLFATFGEIRAFRMPKKAAEGHRGFGFVDFLTRADARRAFNGLVHSTH 835
Query: 508 FKEVPLYLEWA-PEGVFAEAKEKS 530
F L LEWA P+ E +EK+
Sbjct: 836 FYGRRLVLEWAKPDSNLEELREKA 859
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRN 692
QF+ L A KVL N DE + R E EA+ K +TG ++ VRN
Sbjct: 232 QFFGGSKLEIA-KVLSNRFSDEDVEDYVHMTREAEVEASVAK------ILETG-RLFVRN 283
Query: 693 IPFQAKQSEVEELFKAFGELKFVRL--PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQ 750
+P+ ++ LFK +GE+ +++ KK +GL +GF V ++ A A AL
Sbjct: 284 LPYVCSDEDLRYLFKKYGEISDLQMIVSKK---TGLCKGFAIVTYVFPESAVAAFSALDG 340
Query: 751 STHLYGRRLVLEWAEEADNVEDI 773
S L GR L + EE +E I
Sbjct: 341 SI-LKGRMLHILPGEEKREMEQI 362
>gi|159130709|gb|EDP55822.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
A1163]
Length = 825
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 188/337 (55%), Gaps = 35/337 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF Q R ILVKN Y DL+ LFEP+G + R+L+PP G +VEF + +
Sbjct: 473 LDAFKQ--RERGNTAILVKNFSYGVKVDDLRKLFEPYGQITRLLMPPSGTIAIVEFARPD 530
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVF--AEAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
+A+ AF LAY K + L+LE AP +F A + S + K +
Sbjct: 531 EAQKAFKGLAYRKVGDSILFLEKAPANLFDATTAPQTSVLETKAVS-------------- 576
Query: 553 TAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
QG + ED + EP +TL++KNLNF++T + FK S +
Sbjct: 577 -------QGFSTADTFAAEDGD-EPVVTSTLFVKNLNFSTTNERFTEVFKPLDGFVSARI 628
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
K DPK PG+ LSMG+GFV F T+ AL + LD+H++ ++ SN+ +++
Sbjct: 629 KTKPDPKRPGKTLSMGFGFVDFRTKAQAQAALAAMDGYKLDQHELVVRASNKAMDAAE-- 686
Query: 673 VKRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
+R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RG
Sbjct: 687 -ERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RG 743
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
FGF +F++ EA+ AM AL ++THL GRRLVLE+A E
Sbjct: 744 FGFADFVSAREAENAMDAL-KNTHLLGRRLVLEFANE 779
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I S R+FVRNL Y +E DL +F K+G + E+ + D + +KGFA V ++ P+
Sbjct: 295 EHIRLSSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDA 354
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A QAY+ LDG F GR++H++P K
Sbjct: 355 AVQAYKELDGKHFQGRLMHILPATAK 380
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 147/369 (39%), Gaps = 74/369 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N SY V DDL KLFE YG + +++P + A+V F P+ A +A++ L
Sbjct: 486 ILVKNFSYGVKVDDLRKLFEPYGQITRLLMP------PSGTIAIVEFARPDEAQKAFKGL 539
Query: 399 ------DGTVFLGRM-LHLIPGKPKENEGNVDGK-VHCCISERKLDAFNQVVEARSKRII 450
D +FL + +L ++ K V S A E +
Sbjct: 540 AYRKVGDSILFLEKAPANLFDATTAPQTSVLETKAVSQGFSTADTFAAEDGDEPVVTSTL 599
Query: 451 LVKNLPYRTLPTDLKALFEPFGDL--GRVLVPP----YGIT-----GLVEFLQKNQAKAA 499
VKNL + T +F+P R+ P G T G V+F K QA+AA
Sbjct: 600 FVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRTKAQAQAA 659
Query: 500 FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQ 559
++ K + L + + + + A EE ++E+TA++
Sbjct: 660 LAAMDGYKLDQHELVVRASNKAMDA--------------------AEERRREDTAKKIAA 699
Query: 560 QGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
+ T + IKNL F +T+ +R F G + SV V +K D
Sbjct: 700 RR-------------------TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRS 740
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN 679
+ G+GF F + A+ L+N+ L ++ L+ +N EA +++
Sbjct: 741 ------ARGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFAN----EEAVDPEQEIEQ 790
Query: 680 VAKQTGSKI 688
+ K+ G ++
Sbjct: 791 IEKKVGEQL 799
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 310 ASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP 369
AS + + A + +ED+ + + A +I ++NL + T+ D+ LF YG L V +P
Sbjct: 677 ASNKAMDAAEERRREDTAK--KIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP 734
Query: 370 IDKETDKT-KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
K+ D++ +GF F+ A A L T LGR L L
Sbjct: 735 --KKFDRSARGFGFADFVSAREAENAMDALKNTHLLGRRLVL 774
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S++ VRN+P+ A +S++E +F FG+++ + + S +GF +V++I + A +A
Sbjct: 301 SRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFD-TRSTTSKGFAYVQYIEPDAAVQAY 359
Query: 746 KALCQSTHLYGRRL 759
K L H GR +
Sbjct: 360 KEL-DGKHFQGRLM 372
>gi|164661195|ref|XP_001731720.1| hypothetical protein MGL_0988 [Malassezia globosa CBS 7966]
gi|159105621|gb|EDP44506.1| hypothetical protein MGL_0988 [Malassezia globosa CBS 7966]
Length = 824
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 188/352 (53%), Gaps = 31/352 (8%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDA +V + R+ ILVKN+PY T ++++LF FGD+ RVL+PP +VE N
Sbjct: 456 LDALERV-KTRTDDTILVKNIPYGTGADEIRSLFARFGDVARVLMPPSNTIAVVEMPIVN 514
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF +LAY +FK+ LYLE AP G F + + +G+ E +
Sbjct: 515 EARVAFRALAYKRFKDAVLYLEKAPTG-FLPPRGSGAPHAETIASVQGKRAPESSRSLLG 573
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ N D D TLYIKNL+F +T + + F+ V
Sbjct: 574 ADTN-------------DTAAVAAADGTLYIKNLSFATTSERLADAFRALAGFVFARVQT 620
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEH--QIELKRSNRNLESEATT 672
K D K P LSMGYGFV F + E A K + LD H + L R R+ + +A
Sbjct: 621 KPDAKQPMVRLSMGYGFVGFTSAEHAIHAQKAMDQYVLDGHTLSVSLARRGRDADDDAP- 679
Query: 673 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
V + +K+LV+N+PF+A + ++ ELF A G+LK VR+PK++ G RGF F
Sbjct: 680 -------VQRAPSAKMLVKNVPFEATKKDIRELFGAHGQLKSVRVPKQV--HGRTRGFAF 730
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD---NVEDIRKRTNRYF 781
VEF+++ EA+ AM AL + THL GR LVLEWA +A+ V+++R++T +
Sbjct: 731 VEFVSRREAENAMAAL-RHTHLLGRHLVLEWAGDAEGTAGVDELREKTRHAY 781
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I ES R+FVRNL Y+ TED+L F YG + +V +P+D ++ +KG A V F+ P HA
Sbjct: 283 IMESARLFVRNLPYSATEDELASFFSSYGTVEQVHIPLDAQSKASKGLAFVKFVDPSHAL 342
Query: 393 QAYQHLDGTVFLGRMLHLIPG-----KPKENEGNVDGKVH 427
A++ DG +F GR+LH++P KP ++ G++ K H
Sbjct: 343 LAFRGKDGAIFQGRLLHVLPAVSPVPKP-QSSGSLKQKRH 381
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 41/218 (18%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
++ +L+ F +KG VTDV+L +G RRF F+GY E +A+ A YF+ TY+ +SRI
Sbjct: 13 LSDSRLREHFAQKGKVTDVKLMRRPDGTSRRFGFVGYRTEAEAEDARTYFDRTYIDTSRI 72
Query: 89 KVEKCSNLGD----TTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKND 144
V +GD K SK Q+ + K D T+ P K S+
Sbjct: 73 SVALAKQIGDQDLLAEKTARLSKSTKADEKDQRAKSTQKKDD----QTEKKAP-KASEKG 127
Query: 145 PTFSDFLQLHGKDVSKLLPLSNKD----------GEEKEEENEDESNNQIAHAD------ 188
TF +F+ + + + ++N D EEK +S + A AD
Sbjct: 128 ATFEEFMSVMAPKLKRKSWMNNDDLTRANEAEQIREEKPMTKRRKSTTKPAQADPSLTAR 187
Query: 189 ----------------ISDMEYLKLKTKSKDTAPSDPS 210
+SD+EY++ + + K PS
Sbjct: 188 ESDGETPKDNAASNEALSDLEYMRRRMRHKVAGGEGPS 225
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 126/335 (37%), Gaps = 70/335 (20%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFK-------------------PLPLAS-VRTTFL 258
V R TI+VKN+P G ++++ F +P+ + R F
Sbjct: 462 VKTRTDDTILVKNIPYGTGADEIRSLFARFGDVARVLMPPSNTIAVVEMPIVNEARVAFR 521
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
+AY FKD L K + + + SGA AS++ +A
Sbjct: 522 ALAYKRFKD---AVLYLEKAPTGFL-------------PPRGSGAPHAETIASVQGKRAP 565
Query: 319 HWKSQ---EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETD 375
D+ A A G ++++NLS+ T + L F V + + D
Sbjct: 566 ESSRSLLGADTNDTAAVAAADGTLYIKNLSFATTSERLADAFRALAGF--VFARVQTKPD 623
Query: 376 K-------TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHC 428
+ G+ V F EHA A + +D V G L + + + + + D V
Sbjct: 624 AKQPMVRLSMGYGFVGFTSAEHAIHAQKAMDQYVLDGHTLSVSLAR-RGRDADDDAPVQR 682
Query: 429 CISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP--YGIT- 485
S + +LVKN+P+ D++ LF G L V VP +G T
Sbjct: 683 APSAK----------------MLVKNVPFEATKKDIRELFGAHGQLKSVRVPKQVHGRTR 726
Query: 486 --GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
VEF+ + +A+ A +L +T L LEWA
Sbjct: 727 GFAFVEFVSRREAENAMAALRHTHLLGRHLVLEWA 761
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A S ++ V+N+ + T+ D+ +LF +G L V +P + +T+GFA V F+ A
Sbjct: 683 APSAKMLVKNVPFEATKKDIRELFGAHGQLKSVRVP-KQVHGRTRGFAFVEFVSRREAEN 741
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVD 423
A L T LGR L L E VD
Sbjct: 742 AMAALRHTHLLGRHLVLEWAGDAEGTAGVD 771
>gi|344232148|gb|EGV64027.1| multiple RNA-binding domain-containing protein 1 [Candida tenuis
ATCC 10573]
Length = 840
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/506 (30%), Positives = 243/506 (48%), Gaps = 95/506 (18%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I E+GR+F+RN+SYT TE++ +LF YG L EV + ID T K+KGF + F PE A
Sbjct: 305 INETGRLFIRNISYTSTEEEFRELFASYGNLEEVHVAIDTRTGKSKGFVYIQFTNPEDAV 364
Query: 393 QAYQHLDGTVFLGRMLHLIPGK---------------PKENEGNVDGKVHCCISERKLDA 437
+AY+ LD +F GR+LH++P + P + + + K ++ +A
Sbjct: 365 KAYEVLDKEIFQGRLLHILPAEKKKDHRMDEFDLQNLPLKKQRELKKKAQAAKTQFSWNA 424
Query: 438 F-------------------NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG------ 472
+Q++ A+S + + L + D++ FE G
Sbjct: 425 LYMNQDAILESVAAKMGVAKSQLINAQSSDSAVKQALAEAHVIGDVRKYFESKGVDLMSF 484
Query: 473 -----DLGRVLVPPYGI-TGLVE----FLQKNQAKAAF----NSLAYTKFKEVP------ 512
D +LV + T L E F Q + K ++A +F++ P
Sbjct: 485 NKKERDDKVILVKNFSFGTTLQELGEMFSQYGEVKRMLMPPAGTIAIVEFRDAPSARSAF 544
Query: 513 ------------LYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQ 560
LYLE P+ +F +E E+E E +EE A+ +
Sbjct: 545 TKLAYKRSGKSILYLEKGPKDLFT----------REATEQEAVEVKEESTAVEAKVSAKD 594
Query: 561 GVPEVEENVEEDEEREPE---PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
+ E E ++DEE E P ++++KNLNF++T + + + FK A V K D
Sbjct: 595 ILME-ETKPQDDEEVVAETDGPTVSVFVKNLNFSTTTEQLAKIFKSLPGFAVALVKTKPD 653
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
K+P LSMG+GFV+F T+E N+A+ ++ LD H+++LK SNR T
Sbjct: 654 AKNPNSTLSMGFGFVEFRTKEDANKAISLMDGHVLDGHKLQLKLSNR------TGATSGK 707
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
+ +KI+++N+PF+A + ++ ELF AFG++K R+PKK S RGF FVEF
Sbjct: 708 KTKGGKKSTKIIIKNLPFEATRKDIIELFGAFGQIKSARVPKKFDRSA--RGFAFVEFSL 765
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEW 763
EA+ AM L + HL GRRLV+++
Sbjct: 766 LKEAENAMNQL-EGVHLLGRRLVMDY 790
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T+++LK+ F++ G V+D++L G+ RRFAFIGY A++A+ YFNN+++ ++RI
Sbjct: 13 LTEDKLKSHFDKHGDVSDIKLMKKRNGESRRFAFIGYKSPSDAESAVTYFNNSFIDTARI 72
Query: 89 KVEKCSNLGDTTKPKSW 105
VE + D T P S
Sbjct: 73 SVEVAKSFADPTVPMSM 89
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 119/308 (38%), Gaps = 46/308 (14%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKALNK 277
R I+VKN G ++L F V+ + +A + F+D + A K
Sbjct: 489 RDDKVILVKNFSFGTTLQELGEMFSQY--GEVKRMLMPPAGTIAIVEFRDAPSARSAFTK 546
Query: 278 NKSFWKGKQLNIYK------YSKDNSAKYSGAADDNNNA-----SMENIKAKHWKSQEDS 326
GK + + ++++ + + + + + A S ++I + K Q+D
Sbjct: 547 LAYKRSGKSILYLEKGPKDLFTREATEQEAVEVKEESTAVEAKVSAKDILMEETKPQDDE 606
Query: 327 VQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL---PIDKETDKT--KGFA 381
AE + +FV+NL+++ T + L K+F+ A ++ P K + T GF
Sbjct: 607 EVVAETDGPTVSVFVKNLNFSTTTEQLAKIFKSLPGFAVALVKTKPDAKNPNSTLSMGFG 666
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQV 441
V F E A +A +DG V G L L N G ++
Sbjct: 667 FVEFRTKEDANKAISLMDGHVLDGHKLQL-------KLSNRTGATSGKKTK--------- 710
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQ 495
+ I++KNLP+ D+ LF FG + VP G VEF +
Sbjct: 711 -GGKKSTKIIIKNLPFEATRKDIIELFGAFGQIKSARVPKKFDRSARGF-AFVEFSLLKE 768
Query: 496 AKAAFNSL 503
A+ A N L
Sbjct: 769 AENAMNQL 776
>gi|302843097|ref|XP_002953091.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
gi|300261802|gb|EFJ46013.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
Length = 762
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 182/355 (51%), Gaps = 55/355 (15%)
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
ARS +LVKNLPY +L LF G + R+++PP LVEF + A+AAF SL
Sbjct: 428 ARSGTALLVKNLPYSANDDELVELFGRHGPVSRLVLPPARALALVEFAEPQDARAAFKSL 487
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
AY K+ VPLYLEWAP VF + +
Sbjct: 488 AYKKYHHVPLYLEWAPADVFVLPSAPPC------------------------PPDAKAAT 523
Query: 564 EVEENV------EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC-----GPIASVTV 612
E+EE V + D P T+Y+KNL F++ + +R+HF+ G + S V
Sbjct: 524 EIEEAVTAAADDDGDAAANPAVLGTIYVKNLAFSTGDTPLRKHFEAAVAAAGGSLHSALV 583
Query: 613 ARKKDPKSPGQ------FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNL 666
ARKK P + S+GYGFV+ + +K LQ S LD H++ L+ S
Sbjct: 584 ARKKVPGTGKDGGGGTAVQSLGYGFVEVDSEAVAAAVIKKLQGSVLDGHKLVLQIS---- 639
Query: 667 ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 726
+ + S A +K++VRN+ F+A + +++ LF FG LK RLPKK GS
Sbjct: 640 -------RGRKSAAAGAGSTKLVVRNLAFEATKKDIQGLFNPFGHLKSCRLPKKFDGS-- 690
Query: 727 HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
HRGF FVEF+TK EAK A++ L THLYGRRLV+E+A E D ++DIR +T F
Sbjct: 691 HRGFAFVEFVTKQEAKNALEGLA-GTHLYGRRLVVEYAREDDTLDDIRNKTAAKF 744
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ E+ R+FVRNL+YT TE DL+ LF +G L V L +D+ET ++KG A V + +PE A
Sbjct: 249 LLETDRLFVRNLAYTATEADLSDLFGSFGDLQAVHLVVDRETKRSKGLAYVQYQIPEDAV 308
Query: 393 QAYQHLD 399
+A + LD
Sbjct: 309 RAAKQLD 315
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 54 EGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYAPDSS 113
+G+ R+ FIG+ D+A AAL Y+N +Y+ ++++ VE +GD P++WSK+ ++
Sbjct: 1 DGRSRQLGFIGFKSVDEAAAALRYYNRSYMDTAKLAVEFARKVGDEQLPRAWSKHTSGTT 60
Query: 114 AYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQL 153
A +KL A + K G + DP +FL L
Sbjct: 61 ANRKLTTPAGAARPGAANGKAEDGGGE---DPKLREFLAL 97
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
+A SG + V+NL Y+ +D+L +LF ++GP++ ++LP + ALV F P+ A
Sbjct: 427 VARSGTALLVKNLPYSANDDELVELFGRHGPVSRLVLP------PARALALVEFAEPQDA 480
Query: 392 TQAYQHL 398
A++ L
Sbjct: 481 RAAFKSL 487
>gi|358387674|gb|EHK25268.1| hypothetical protein TRIVIDRAFT_72404 [Trichoderma virens Gv29-8]
Length = 841
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 162/506 (32%), Positives = 239/506 (47%), Gaps = 101/506 (19%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I + R+FVRNL YT TE+DL F K+G L EV LP + + KGFA+V F +A
Sbjct: 312 ITRTSRLFVRNLPYTTTEEDLHHEFGKFGTLQEVHLPTNASGVR-KGFAMVLFEDSSNAV 370
Query: 393 QAYQHLDGTVFLGRMLHLIPGK-------------PKENEGNVDGKVHCCISE------- 432
A+Q LDG F GR+LH+IP + P + + + K S
Sbjct: 371 SAFQALDGVTFQGRILHIIPAEAKKSVDEFGMSKLPLKKQNMIRKKAEAATSVFNWNSMY 430
Query: 433 RKLDAFNQVVEAR---SKRIIL--------VKN-LPYRTLPTDLKALFEPFG-DLG---- 475
DA N V AR +K +L VK + T+ + KA F G DL
Sbjct: 431 MSQDAVNASVAARLGVAKSEVLDPTSADAGVKQAIAETTVIQETKAFFASNGVDLDAFKS 490
Query: 476 ------RVLVP--PYGIT----------------------GLVEFLQ---KNQAKAAFNS 502
+LV PYG + G + +Q N AKAAF
Sbjct: 491 HKRGGTSILVKNFPYGTSMEELRKMFEECGPVLRVLMPPTGTIAIIQFAQLNHAKAAFGK 550
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
+AY + K+ L+LE AP +F K+ ++ G D + GV
Sbjct: 551 MAYRRVKDSVLFLEKAPVDLF---------KKDAVQDQASPVG-----------DQRTGV 590
Query: 563 PEVEENVEE-----DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
++ +V+E D+ EP +L+++NLNF +T + F+ S V K D
Sbjct: 591 QKL--SVDELLSSGDKVEEPAETASLFVRNLNFATTTGKLAEAFEPLDGFVSARVKTKID 648
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
PK PGQ LSMG+GFV+F ++ ALK + LD H + +K S+R ++ + +
Sbjct: 649 PKKPGQTLSMGFGFVEFRSKSQAQAALKTMDGYVLDGHALGVKASHRGHDAAEERRREDA 708
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
+ A +KI+++N+PFQA + ++ LF +G+L+ VR+PKK RGF F +F+T
Sbjct: 709 AKKAAAQRTKIVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKK--ADYTARGFAFADFVT 766
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEW 763
EA+ A+ AL + THL GRRLVL++
Sbjct: 767 PREAENALNAL-KDTHLLGRRLVLDF 791
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 137/322 (42%), Gaps = 45/322 (13%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKALNK 277
HKR +I+VKN P G ++L+ F+ P+ V G +A I F + A K
Sbjct: 491 HKRGGTSILVKNFPYGTSMEELRKMFEECGPVLRVLMPPTGTIAIIQFAQLNHAKAAFGK 550
Query: 278 --------NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
+ F + ++++K KD + D ++ + S D V
Sbjct: 551 MAYRRVKDSVLFLEKAPVDLFK--KDAVQDQASPVGDQRTG-VQKLSVDELLSSGDKV-- 605
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL-----AEVILPID-KETDKT--KGFA 381
E+ AE+ +FVRNL++ T L + FE PL A V ID K+ +T GF
Sbjct: 606 -EEPAETASLFVRNLNFATTTGKLAEAFE---PLDGFVSARVKTKIDPKKPGQTLSMGFG 661
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKL-DAFNQ 440
V F A A + +DG V G L G + G H ER+ DA +
Sbjct: 662 FVEFRSKSQAQAALKTMDGYVLDGHAL----GVKASHRG------HDAAEERRREDAAKK 711
Query: 441 VVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP---PYGITG--LVEFLQKNQ 495
R+K I++KNLP++ D++ LF +G L V VP Y G +F+ +
Sbjct: 712 AAAQRTK--IVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYTARGFAFADFVTPRE 769
Query: 496 AKAAFNSLAYTKFKEVPLYLEW 517
A+ A N+L T L L++
Sbjct: 770 AENALNALKDTHLLGRRLVLDF 791
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 16/129 (12%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT+ + + F K +TD++L RR ++GY + A A+ YFN +Y+ S+
Sbjct: 15 ITEAEFRKHFSAKNREITDLKLIPQ-----RRIGYVGYKTPEDASGAVKYFNKSYIRMSK 69
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKK---SKND 144
I VE + D K+ D +A Q LK + SK K+ ++D
Sbjct: 70 ISVEPAKPISDPALNKNQRLVHSD-------QQVASHQPLKQDEEGGSKKRKREDLDESD 122
Query: 145 PTFSDFLQL 153
P +FL++
Sbjct: 123 PKLREFLRV 131
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S++ VRN+P+ + ++ F FG L+ V LP SG+ +GF V F + A A
Sbjct: 316 SRLFVRNLPYTTTEEDLHHEFGKFGTLQEVHLPTN--ASGVRKGFAMVLFEDSSNAVSAF 373
Query: 746 KALCQSTHLYGRRLVLEWAEEADNVED 772
+AL T GR L + AE +V++
Sbjct: 374 QALDGVT-FQGRILHIIPAEAKKSVDE 399
>gi|356554642|ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-like [Glycine max]
Length = 824
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 197/344 (57%), Gaps = 36/344 (10%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS ++LVKNLPY + +L +F FG L ++++PP LV FL+ +A+AAF LA
Sbjct: 475 RSNHVLLVKNLPYGSTENELAKMFGKFGSLDKIILPPTKTLALVVFLEPAEARAAFRGLA 534
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y ++K+ PLYLEWAP + ++ S K N GE N
Sbjct: 535 YKRYKDAPLYLEWAPSNILSQC---STSKNNAMNSVIGE--------------NDAKRQM 577
Query: 565 VEENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKKD 617
+E+ VE + + +PD +L++KNLNF + ++S+R+HF K G I SV V +
Sbjct: 578 LEQQVERITDVDIDPDRVQARSLFVKNLNFKTIDESLRKHFSEHMKEGRILSVKVLKH-- 635
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
G+ +SMG+GFV+F + E+ + LQ + LD H + L+ +++++ K+
Sbjct: 636 -LKNGKNVSMGFGFVEFDSPETATNVCRDLQGTVLDSHALILQPC--HVKNDGQKQKKID 692
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
+ ++ +K+ ++N+ F+A + ++ LF FG++K +RLP K G HRGF FVE++T
Sbjct: 693 KD---RSSTKLHIKNVAFEATEKDLRRLFSPFGQIKSLRLPMKF---GSHRGFAFVEYVT 746
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+ EAK A +AL STHLYGR L++E A+E + +E++R +T F
Sbjct: 747 QQEAKNAREALA-STHLYGRHLLIEHAKEDETLEELRAKTAAQF 789
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 13/132 (9%)
Query: 29 ITQEQLKAKFEEKG-TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
+ +++L+ F KG +TDV+L T +GK R+FAFIGY ED+AQ A+ YFN ++ +SR
Sbjct: 29 VGEDELREFFSGKGGIITDVKLMRTKDGKSRQFAFIGYRTEDEAQEAIRYFNKNFLRTSR 88
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDL-KPEHTK----DSKPG-KKS 141
I E GD P+ WS+++ +K + DL KP K +SK G
Sbjct: 89 IICEVARKHGDANLPRPWSRHS------KKEDDKVTAPDLEKPSRAKGQGENSKGGVGDD 142
Query: 142 KNDPTFSDFLQL 153
+DP DFLQ+
Sbjct: 143 VDDPQLQDFLQV 154
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 56/79 (70%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ +S R+FVRNL Y TE++L + F ++G +++V L +DK+T ++KG A + + P+ A
Sbjct: 283 VFDSCRLFVRNLPYMTTEEELEEHFSRFGSVSQVHLVVDKDTKRSKGIAYILYTAPDIAA 342
Query: 393 QAYQHLDGTVFLGRMLHLI 411
+A + LD ++F GR+LH++
Sbjct: 343 RAQEELDNSIFQGRLLHVM 361
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 136/329 (41%), Gaps = 57/329 (17%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYF--------------KPLPL------ASVRTTFLGM 260
KR H ++VKNLP G + +L F K L L A R F G+
Sbjct: 474 KRSNHVLLVKNLPYGSTENELAKMFGKFGSLDKIILPPTKTLALVVFLEPAEARAAFRGL 533
Query: 261 AYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHW 320
AY +KD + + NI + + N+A + ++ +
Sbjct: 534 AYKRYKDA----------PLYLEWAPSNILSQCSTSKNNAMNSVIGENDAKRQMLEQQVE 583
Query: 321 KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY---GPL--AEVILPIDKETD 375
+ + V D ++ +FV+NL++ ++ L K F ++ G + +V+ + +
Sbjct: 584 RITD--VDIDPDRVQARSLFVKNLNFKTIDESLRKHFSEHMKEGRILSVKVLKHLKNGKN 641
Query: 376 KTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKL 435
+ GF V F PE AT + L GTV L L P K N+G ++K+
Sbjct: 642 VSMGFGFVEFDSPETATNVCRDLQGTVLDSHALILQPCHVK-NDGQ---------KQKKI 691
Query: 436 DAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT---GLVEFL 491
D + RS + +KN+ + DL+ LF PFG + + +P +G VE++
Sbjct: 692 D------KDRSSTKLHIKNVAFEATEKDLRRLFSPFGQIKSLRLPMKFGSHRGFAFVEYV 745
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPE 520
+ +AK A +LA T L +E A E
Sbjct: 746 TQQEAKNAREALASTHLYGRHLLIEHAKE 774
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ ++N+++ TE DL +LF +G + + LP+ + +GFA V ++ + A A
Sbjct: 697 STKLHIKNVAFEATEKDLRRLFSPFGQIKSLRLPM--KFGSHRGFAFVEYVTQQEAKNAR 754
Query: 396 QHLDGTVFLGRMLHLIPGKPKENE 419
+ L T GR HL+ KE+E
Sbjct: 755 EALASTHLYGR--HLLIEHAKEDE 776
>gi|365982081|ref|XP_003667874.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
gi|343766640|emb|CCD22631.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
Length = 843
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 191/344 (55%), Gaps = 16/344 (4%)
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNS 502
+ R R ILVKN P+ T ++ LF PFG++ R+L+P G +V+F +AAF+
Sbjct: 511 DQRDHRTILVKNFPFGTTREEIGELFSPFGEIERLLMPAAGTIAIVQFRDVTSGRAAFSK 570
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
LA+ +FK+ +YLE P+ F E S + E N+ E ++ K D G
Sbjct: 571 LAFKRFKDGIIYLEKGPKDCFTRNAETSDSVDVEANQTAVVEIKDSVK------DIMDGT 624
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPG 622
E +E E +E P +++IKNLNF+++ + FK V K DPK P
Sbjct: 625 KEGDETGEGEEAIVDGPTVSIFIKNLNFSTSSSDLTSRFKVFNGFVVAQVKTKPDPKHPN 684
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK 682
+ LSMG+GF +F T+E N + + + +D H+I+LK S+R T +S+ K
Sbjct: 685 KTLSMGFGFAEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQ-----GTKGNNTSSKNK 739
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF F+EF+ EA+
Sbjct: 740 TKSAKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGFAFIEFLLPKEAE 797
Query: 743 RAMKALCQSTHLYGRRLVLEWAEE--ADNVEDIRKRTNRYFGTA 784
AM L Q HL GRRLV+++A+E AD E+I + T + T+
Sbjct: 798 NAMDQL-QGVHLLGRRLVMQYAQEDAADAEEEIARMTKKVQKTS 840
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+GR+F+RN+ Y+ TE+D KLF +G L EV + +D T ++KGFA + F P+ A QAY
Sbjct: 328 TGRLFLRNILYSSTEEDFRKLFSPFGELEEVHIALDTRTGQSKGFAYILFKDPKDALQAY 387
Query: 396 QHLDGTVFLGRMLHLIPG 413
LD +F GR+LH++P
Sbjct: 388 IELDKQIFQGRLLHILPA 405
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 146/352 (41%), Gaps = 80/352 (22%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCN 272
+R + TI+VKN P G ++++ F P +P A +A + F+D +
Sbjct: 512 QRDHRTILVKNFPFGTTREEIGELFSPFGEIERLLMPAAGT------IAIVQFRDVTSGR 565
Query: 273 KALNKNKSFWKGKQLNIY--KYSKD---NSAKYSGAAD-DNNNASMENIKAKHWKSQEDS 326
A +K +F + K IY K KD +A+ S + D + N ++ IK DS
Sbjct: 566 AAFSK-LAFKRFKDGIIYLEKGPKDCFTRNAETSDSVDVEANQTAVVEIK--------DS 616
Query: 327 VQFAEDIAESGR-------------------IFVRNLSYTVTEDDLTKLFEKYGP--LAE 365
V+ DI + + IF++NL+++ + DLT F+ + +A+
Sbjct: 617 VK---DIMDGTKEGDETGEGEEAIVDGPTVSIFIKNLNFSTSSSDLTSRFKVFNGFVVAQ 673
Query: 366 V-ILPIDKETDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNV 422
V P K +KT GF F E A +DGTV G + L + +GN
Sbjct: 674 VKTKPDPKHPNKTLSMGFGFAEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQGTKGN- 732
Query: 423 DGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-- 480
+ N+ A+ I+VKNLP+ D+ LF FG L V VP
Sbjct: 733 -----------NTSSKNKTKSAK----IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKK 777
Query: 481 ----PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKE 528
G +EFL +A+ A + L L +++A E A+A+E
Sbjct: 778 FDKSARGF-AFIEFLLPKEAENAMDQLQGVHLLGRRLVMQYAQEDA-ADAEE 827
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TDV++ G+ RRFAFIGY E+ A A++YFN +Y+ +++I+V + D P+
Sbjct: 38 ITDVKVLRDRNGESRRFAFIGYRNEEDAFDAVNYFNGSYINTAKIEVSMAKSFADPRVPQ 97
>gi|170595572|ref|XP_001902435.1| RNA recognition motif. [Brugia malayi]
gi|158589895|gb|EDP28716.1| RNA recognition motif [Brugia malayi]
Length = 579
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 208/401 (51%), Gaps = 59/401 (14%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E+L++ F+ G +TD LKYT +GKFRRFAF+G+ ++ AQ A D +N ++ +SR+
Sbjct: 14 TEEKLRSHFKSFGKITDCSLKYTRDGKFRRFAFVGFETDENAQKARDNLHNAFMGTSRLT 73
Query: 90 VEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHT-KDSKPGKKS---KNDP 145
VE+C GD+TKP++WSKYA SSAY++LH ++ +K + + S P K ++D
Sbjct: 74 VEECKPFGDSTKPRAWSKYAKGSSAYKRLHPEEEEEKMKRIISLRGSSPSAKKMRKESDK 133
Query: 146 TFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTA 205
F DF+++ LP+ + +E +E L S DT
Sbjct: 134 EFYDFIEVQ----KSALPIPSSSNDESNNNLIEEL----------------LTGVSGDTL 173
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS---VRTTFLGMAY 262
S ++++ P VK K +K +F P+ L VR + +A+
Sbjct: 174 LS-------------------LIIRGFPKTVKAKGIKDWFSPIKLKGIKIVRGSAEAIAF 214
Query: 263 IGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKS 322
+ F E + KAL +++ F+ G +L I K +N S + H
Sbjct: 215 VTFFKESDVKKALKRDEQFFGGSKLEITKVL-------------SNRVSKDVEDYVHMTR 261
Query: 323 QEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFAL 382
+ + I E+GR+FVRNL Y +++DL LF+KYG ++++ + + K+T KGFA+
Sbjct: 262 EAEVEASVAKILETGRLFVRNLPYVCSDEDLRYLFKKYGEISDLQMIVSKKTGLCKGFAI 321
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVD 423
VT++ PE A A+ LDG++ GRMLH++PG+ K +D
Sbjct: 322 VTYVFPESAVAAFSALDGSILKGRMLHILPGEEKREIEQID 362
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 77/127 (60%), Gaps = 3/127 (2%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD F++ RS +I++KNL + +LK +F G + ++L+PP GIT ++E
Sbjct: 447 LDVFSRPATKRSNTVIIIKNLTTKVDTEELKRMFARHGPVKQLLMPPGGITAILEMENSV 506
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
A+ AFN+LAY +F+ PL+LEWAP +F K +SK +++++ E E + E+K+N
Sbjct: 507 DAQKAFNTLAYARFRSQPLFLEWAPYDLFKLRKLESKDEDQKQQE---PEIQTERKDNEF 563
Query: 555 EEDNQQG 561
++ Q+
Sbjct: 564 IKERQKA 570
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 15/154 (9%)
Query: 630 GFVQFYTRESLNQALK----VLQNSSLDEHQIELKRSNRNLESEATTVKRKS--SNVAK- 682
FV F+ + +ALK S L+ ++ R ++++E + ++VAK
Sbjct: 213 AFVTFFKESDVKKALKRDEQFFGGSKLEITKVLSNRVSKDVEDYVHMTREAEVEASVAKI 272
Query: 683 -QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL--PKKMVGSGLHRGFGFVEFITKN 739
+TG ++ VRN+P+ ++ LFK +GE+ +++ KK +GL +GF V ++
Sbjct: 273 LETG-RLFVRNLPYVCSDEDLRYLFKKYGEISDLQMIVSKK---TGLCKGFAIVTYVFPE 328
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDI 773
A A AL S L GR L + EE +E I
Sbjct: 329 SAVAAFSALDGSI-LKGRMLHILPGEEKREIEQI 361
>gi|50285445|ref|XP_445151.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691154|sp|Q6FXP4.1|MRD1_CANGA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49524454|emb|CAG58051.1| unnamed protein product [Candida glabrata]
Length = 861
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 177/323 (54%), Gaps = 25/323 (7%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R R+ILVKN P+ T +L LF PFG L R+L+PP G +V+F ++AF+ LA
Sbjct: 509 RDDRVILVKNFPFGTTREELGELFVPFGKLERLLMPPAGTIAIVQFRDIASGRSAFSKLA 568
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
+ +FK +YLE P+ F +A + E+ E +EEK A + +
Sbjct: 569 FKRFKGTVIYLEKGPKDCFTKAA----------SNEDAMEHDEEKSAKEAGPSSADLLES 618
Query: 565 VEENVEEDEEREPE-----PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
V ED+E E E P +++IKNLNF +T + FK V K DPK
Sbjct: 619 VSSKKTEDKEDEDEQVVDGPTVSIFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPK 678
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN 679
+ LSMG+GFV+F T+E + + + +D H+I+LK S+R + + K+K+ N
Sbjct: 679 QKNKVLSMGFGFVEFRTKEQATAVISAMDGTVIDGHKIQLKLSHRQGNA-GSQEKKKAKN 737
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF FVEF+
Sbjct: 738 ------GKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGFAFVEFVLPK 789
Query: 740 EAKRAMKALCQSTHLYGRRLVLE 762
EA+ AM L Q HL GRRLV++
Sbjct: 790 EAENAMDQL-QGVHLLGRRLVMQ 811
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 55/89 (61%)
Query: 325 DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVT 384
D Q I ++GR+F+RN+ Y+ TEDD KLF YG L EV + +D T +KGFA V
Sbjct: 313 DEEQAIAKIQKTGRLFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVL 372
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPG 413
F PE A QAY LD +F GR+LH++
Sbjct: 373 FAKPEEAVQAYIELDKQIFQGRLLHILAA 401
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 139/325 (42%), Gaps = 67/325 (20%)
Query: 216 KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LP------------LASVRT 255
K+P +R I+VKN P G +++L F P +P +AS R+
Sbjct: 504 KSP-SQRDDRVILVKNFPFGTTREELGELFVPFGKLERLLMPPAGTIAIVQFRDIASGRS 562
Query: 256 TFLGMAYIGFKD-----EKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNA 310
F +A+ FK EK K S + ++ ++ SAK +G + +
Sbjct: 563 AFSKLAFKRFKGTVIYLEKGPKDCFTKAAS-----NEDAMEHDEEKSAKEAGPSSAD--- 614
Query: 311 SMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGP--LAEV-I 367
+E++ +K + +ED + D + IF++NL++ T LT F+ + +A+V
Sbjct: 615 LLESVSSKKTEDKEDEDEQVVD-GPTVSIFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKT 673
Query: 368 LPIDKETDK--TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDG- 424
P K+ +K + GF V F E AT +DGTV +DG
Sbjct: 674 KPDPKQKNKVLSMGFGFVEFRTKEQATAVISAMDGTV-------------------IDGH 714
Query: 425 KVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP---- 480
K+ +S R+ +A +Q + I+VKNLP+ D+ LF FG L V VP
Sbjct: 715 KIQLKLSHRQGNAGSQEKKKAKNGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFD 774
Query: 481 --PYGITGLVEFLQKNQAKAAFNSL 503
G VEF+ +A+ A + L
Sbjct: 775 KSARGF-AFVEFVLPKEAENAMDQL 798
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 42 GTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTK 101
G +TD+++ EGK RRFAFIGY E A A++YF+ +++++S+I+V+ + D
Sbjct: 37 GLITDLRILKNREGKSRRFAFIGYKNEQDALDAVNYFDGSFIYTSKIEVDMAKSFADPRV 96
Query: 102 PKSW 105
PKS
Sbjct: 97 PKSM 100
>gi|169616726|ref|XP_001801778.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
gi|111060126|gb|EAT81246.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
Length = 830
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 190/342 (55%), Gaps = 37/342 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L+AF + A+ ILVKN+P+ P +L+ +FE G + + L+PP G+T +VEF
Sbjct: 481 LEAFQR--SAKGDLAILVKNVPHGVTPDELRKMFEEHGTVTKFLMPPTGMTAIVEFSNIA 538
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
QAK AF SL+Y K K+ LYLE AP+ +F E +
Sbjct: 539 QAKTAFMSLSYRKMKDSILYLEKAPKDLFKEGAVIDVPRT-------------------- 578
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
+ G P + + + E PEP+ TLY++NLNF +T + + FK S
Sbjct: 579 ---STSGGPAAKLSATDLLEEAPEPEAANTATLYVRNLNFTTTTERLTEAFKPLSGFRSA 635
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK LSMG+GFV+F + E+ + AL+ + L+ H++++K S++ ++A
Sbjct: 636 KVKTKVDPKR--GVLSMGFGFVEFNSAETASAALRTMDGHDLEGHKLQIKASHKG--ADA 691
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
+RK K +KI+++N+PF+A + +V LF +G+L+ VR+PKK S RGF
Sbjct: 692 AEERRKEDAAKKAASTKIIIKNLPFEAGKKDVRALFTPYGQLRSVRVPKKFDASS--RGF 749
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVE 771
GF EF TK +A AM AL ++THL GRRLVL +AE E+D+ E
Sbjct: 750 GFAEFTTKRDAVNAMNAL-KNTHLLGRRLVLAFAETESDDPE 790
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 59/88 (67%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I E+GR+++RNL + VTED+L + F KYG L EV +P+ K K KGFA + F PE
Sbjct: 303 EKIRETGRLYLRNLHFEVTEDELRQHFAKYGSLEEVHVPLKKSDGKGKGFAFIQFKEPEQ 362
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A AY DGT+F GR+LH+I K K++
Sbjct: 363 AVVAYDDTDGTIFQGRLLHIISAKAKKD 390
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 131/538 (24%), Positives = 208/538 (38%), Gaps = 79/538 (14%)
Query: 13 NHISLLDLDEVEFI------------YKITQEQLKAKFEEKGTVTDVQLKYT-TEGKFRR 59
+H + DEVE I +++T+++L+ F + G++ +V + ++GK +
Sbjct: 292 DHTKVPSSDEVEKIRETGRLYLRNLHFEVTEDELRQHFAKYGSLEEVHVPLKKSDGKGKG 351
Query: 60 FAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLH 119
FAFI + +QA A D + T + + DT S +++ +K
Sbjct: 352 FAFIQFKEPEQAVVAYDDTDGTIFQGRLLHIISAKAKKDT----SLNEFEISKLPLKKQK 407
Query: 120 NIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENE-- 177
I KQD + D S G ++LL ++ D K+ E
Sbjct: 408 EIRRKQDAT--RATFNWNSLYLNADAVMSTIANRMGISKAELLDPTSSDAAVKQAHAETH 465
Query: 178 --DESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAG 235
E+ + A + D+E + K D A I+VKN+P G
Sbjct: 466 IIQETKSYFAQHGV-DLEAFQRSAKG-DLA---------------------ILVKNVPHG 502
Query: 236 VKKKDLKAYFKPLPLASVRTTFL----GM-AYIGFKDEKNCNKALNKNKSFWKGKQLNIY 290
V +L+ F+ T FL GM A + F + A + S+ K K +Y
Sbjct: 503 VTPDELRKMFEE---HGTVTKFLMPPTGMTAIVEFSNIAQAKTAF-MSLSYRKMKDSILY 558
Query: 291 KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE-DIAESGRIFVRNLSYTVT 349
GA D S A + + + E + A + ++VRNL++T T
Sbjct: 559 LEKAPKDLFKEGAVIDVPRTSTSGGPAAKLSATDLLEEAPEPEAANTATLYVRNLNFTTT 618
Query: 350 EDDLTKLFEKYGPL--AEVILPID-KETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGR 406
+ LT+ F+ A+V +D K + GF V F E A+ A + +DG G
Sbjct: 619 TERLTEAFKPLSGFRSAKVKTKVDPKRGVLSMGFGFVEFNSAETASAALRTMDGHDLEGH 678
Query: 407 MLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKA 466
L + K + D RK DA + + I++KNLP+ D++A
Sbjct: 679 KLQI-----KASHKGAD----AAEERRKEDAAKKAASTK----IIIKNLPFEAGKKDVRA 725
Query: 467 LFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
LF P+G L V VP G G EF K A A N+L T L L +A
Sbjct: 726 LFTPYGQLRSVRVPKKFDASSRGF-GFAEFTTKRDAVNAMNALKNTHLLGRRLVLAFA 782
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 127/333 (38%), Gaps = 73/333 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N+ + VT D+L K+FE++G + + ++P T A+V F A A+ L
Sbjct: 494 ILVKNVPHGVTPDELRKMFEEHGTVTKFLMP------PTGMTAIVEFSNIAQAKTAFMSL 547
Query: 399 DGTVFLGRMLHLIPGKPKE--NEGNVDGKVHCCIS---ERKLDAFNQV-----VEARSKR 448
+L+L PK+ EG V S KL A + + EA +
Sbjct: 548 SYRKMKDSILYL-EKAPKDLFKEGAVIDVPRTSTSGGPAAKLSATDLLEEAPEPEAANTA 606
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGIT----GLVEFLQKNQAKAA 499
+ V+NL + T L F+P V P G+ G VEF A AA
Sbjct: 607 TLYVRNLNFTTTTERLTEAFKPLSGFRSAKVKTKVDPKRGVLSMGFGFVEFNSAETASAA 666
Query: 500 FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQ 559
++ EG + K KG + EE +KE+ A++
Sbjct: 667 LRTMDGHDL-----------EGHKLQIKASHKG---------ADAAEERRKEDAAKK--- 703
Query: 560 QGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
T + IKNL F + + +R F G + SV V +K D
Sbjct: 704 ------------------AASTKIIIKNLPFEAGKKDVRALFTPYGQLRSVRVPKKFDAS 745
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
S G+GF +F T+ A+ L+N+ L
Sbjct: 746 ------SRGFGFAEFTTKRDAVNAMNALKNTHL 772
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
+ T++ ++ F K VTDV+ RR ++GY + A A+ YFN T++ ++
Sbjct: 18 RFTEDDVRKHFA-KFPVTDVKF-----FPHRRIGYVGYKSPEDAAKAVKYFNKTFINLTK 71
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTF 147
I E + D PKS + + SA Q IAP L+ K + + + DP
Sbjct: 72 IYAEIARPIADKELPKSRRQQRLEKSAPQNDEYIAP---LQENALKRKREQAELEQDPKL 128
Query: 148 SDFLQLH 154
+FLQ++
Sbjct: 129 KEFLQVY 135
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 24/98 (24%)
Query: 556 EDNQQGVPEVEENVEEDE---EREPEPDTT----------------LYIKNLNFNSTEDS 596
E Q+ PEV E +E E E+ PE D T LY++NL+F TED
Sbjct: 265 EAPQKRQPEVIEQPDEAEAVEEQAPEADHTKVPSSDEVEKIRETGRLYLRNLHFEVTEDE 324
Query: 597 IRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQF 634
+R+HF K G + V V K KS G+ G+ F+QF
Sbjct: 325 LRQHFAKYGSLEEVHVPLK---KSDGK--GKGFAFIQF 357
>gi|402083842|gb|EJT78860.1| multiple RNA-binding domain-containing protein 1 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 842
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 193/355 (54%), Gaps = 29/355 (8%)
Query: 425 KVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGI 484
KV+ + LDAF R IILVKN Y T +L+ +FE G + RVL+PP G
Sbjct: 471 KVYFATNGIDLDAFKS--RQRGDTIILVKNFSYGTTIDELRKMFEEHGIVLRVLMPPSGT 528
Query: 485 TGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEE 544
+VEF Q A+AAF +LAY + K+ L+LE P+G+F KN+ +
Sbjct: 529 IAIVEFAQAPHARAAFMNLAYRRVKDSVLFLEKGPKGLF-------------KNQPTPTQ 575
Query: 545 GEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC 604
+ TA + V E +E DE ++ T+L+++ LNF +T + + F+
Sbjct: 576 IQSSSGGPTAAKKLS-----VTELLERDEVQDVAETTSLFVRGLNFATTTEKLAETFRPL 630
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
S V + D K PG LSMG+GFV+F T+E + ALK + +L+ H + +K S+R
Sbjct: 631 DGFVSARVKSRTDSKRPGVVLSMGFGFVEFRTKEQAHAALKTMDGYTLEGHVLAVKASHR 690
Query: 665 NLESEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV 722
L +A +R+ K G +KI+++N+PF+A +++V LF +G+L+ VR+PK
Sbjct: 691 GL--DAAEERRREDKAKKLAGQHTKIIIKNLPFEATRADVRALFGTYGQLRAVRVPKNF- 747
Query: 723 GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW--AEEADNVEDIRK 775
RGF F EF T EA+ A+ AL STHL GR+LVLE+ AE D E+I K
Sbjct: 748 -ENKTRGFAFAEFTTPKEAENALNALG-STHLLGRKLVLEFAQAEAVDAEEEIAK 800
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ ++ R+FVRNL Y+ TEDDL FEK+G + EV LP+ K + +KG+ALV F A
Sbjct: 306 VRKTSRLFVRNLPYSATEDDLRSHFEKFGSVEEVHLPVAKSS-ASKGYALVLFTSASSAI 364
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPK 416
A+Q DG++F GR+LH++P + K
Sbjct: 365 DAFQKSDGSLFQGRILHVLPAQSK 388
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 323 QEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL-AEVILPIDKETDKTK--- 378
+ D VQ D+AE+ +FVR L++ T + KL E + PL V + TD +
Sbjct: 596 ERDEVQ---DVAETTSLFVRGLNFATTTE---KLAETFRPLDGFVSARVKSRTDSKRPGV 649
Query: 379 ----GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERK 434
GF V F E A A + +DG G +L + K + +D R+
Sbjct: 650 VLSMGFGFVEFRTKEQAHAALKTMDGYTLEGHVLAV-----KASHRGLD----AAEERRR 700
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLV 488
D ++ +K I++KNLP+ D++ALF +G L V VP G
Sbjct: 701 EDKAKKLAGQHTK--IIIKNLPFEATRADVRALFGTYGQLRAVRVPKNFENKTRGF-AFA 757
Query: 489 EFLQKNQAKAAFNSLAYTKFKEVPLYLEWA-PEGVFAE 525
EF +A+ A N+L T L LE+A E V AE
Sbjct: 758 EFTTPKEAENALNALGSTHLLGRKLVLEFAQAEAVDAE 795
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 129/340 (37%), Gaps = 82/340 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N SY T D+L K+FE++G + V++P + A+V F HA A+ +L
Sbjct: 494 ILVKNFSYGTTIDELRKMFEEHGIVLRVLMP------PSGTIAIVEFAQAPHARAAFMNL 547
Query: 399 ------DGTVFLGRMLHLI------PGKPKENEGNVDGKVHCCISE-RKLDAFNQVVEAR 445
D +FL + + P + + + G ++E + D V E
Sbjct: 548 AYRRVKDSVLFLEKGPKGLFKNQPTPTQIQSSSGGPTAAKKLSVTELLERDEVQDVAETT 607
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDL--GRV----------LVPPYGITGLVEFLQK 493
S + V+ L + T L F P RV +V G G VEF K
Sbjct: 608 S---LFVRGLNFATTTEKLAETFRPLDGFVSARVKSRTDSKRPGVVLSMGF-GFVEFRTK 663
Query: 494 NQAKAAFNSL-AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
QA AA ++ YT EG K +G + EE ++E+
Sbjct: 664 EQAHAALKTMDGYTL------------EGHVLAVKASHRGLDA---------AEERRRED 702
Query: 553 TAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
A++ Q T + IKNL F +T +R F G + +V V
Sbjct: 703 KAKKLAGQ-------------------HTKIIIKNLPFEATRADVRALFGTYGQLRAVRV 743
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+ + K + G+ F +F T + AL L ++ L
Sbjct: 744 PKNFENK------TRGFAFAEFTTPKEAENALNALGSTHL 777
>gi|296818279|ref|XP_002849476.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
gi|238839929|gb|EEQ29591.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
Length = 808
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 186/344 (54%), Gaps = 27/344 (7%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R +L+KN Y D+K L EPFG L R+L+PP G +VEF ++A+ AF LA
Sbjct: 465 RGNTALLLKNFTYGVSSEDIKKLCEPFGQLTRLLMPPSGTIAIVEFAMPDEAQRAFKGLA 524
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + E LY+E AP+ +F E G N E+ QG
Sbjct: 525 YKRLGESILYVEKAPKDLF----------------EGGPTVTMPSLLN--EKVVSQGF-S 565
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
+ DE P TL+++NLNF +T+ + F+ S V + DPK PG+
Sbjct: 566 TSDTFRADEPEAPMESATLFVRNLNFITTDTGLSDLFRPLDGFISAQVKTRPDPKKPGER 625
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
LSMG+GFV+F +R ALK L LD+H++ +K S++ + +A +R+ N K +
Sbjct: 626 LSMGFGFVEFKSRAQAEAALKALNGYKLDQHELVIKPSHKGM--DAAEQRRREDNAKKAS 683
Query: 685 G--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+KI+++N+PFQA + ++ LF A+G+L+ VR+PKK + RGF F +F++ EA+
Sbjct: 684 AKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTA--RGFAFADFVSSREAE 741
Query: 743 RAMKALCQSTHLYGRRLVLEW-AEEADNVEDIRKRTNRYFGTAV 785
AM AL ++THL GRRLVLE+ +EEA + ED K R V
Sbjct: 742 NAMDAL-RNTHLLGRRLVLEFVSEEATDPEDQIKEIERKMDAQV 784
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I +GR+F+RNL Y +EDDL+ F ++G + E + ID +KGFA + ++ +
Sbjct: 279 ESIRLTGRLFIRNLPYNASEDDLSAAFSRFGKIEETHVAIDTRHSTSKGFAYIQYVESDA 338
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A +AY+ LDG F GR++H++P K
Sbjct: 339 AIEAYKQLDGKDFQGRLMHILPASSK 364
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 81/199 (40%), Gaps = 36/199 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
T+ V+NL L F+PL A V+T +G ++ FK
Sbjct: 583 TLFVRNLNFITTDTGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAE 642
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
AL K LN YK + S + + A + +ED+ + A
Sbjct: 643 AAL---------KALNGYKLDQHELVI---------KPSHKGMDAAEQRRREDNAKKAS- 683
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
A+ +I ++NL + T+ D+ LF YG L V +P K+ D+T +GFA F+ A
Sbjct: 684 -AKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVP--KKFDRTARGFAFADFVSSREA 740
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A L T LGR L L
Sbjct: 741 ENAMDALRNTHLLGRRLVL 759
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T ++L+ F ++ VTD + RR F+G+ + A+ A+ YFN T++ SRI
Sbjct: 15 LTSDKLRNHFAQRFEVTDAHVIPN-----RRIGFVGFKGPNLAENAIKYFNKTFINMSRI 69
Query: 89 KVEKC 93
VE
Sbjct: 70 SVEMA 74
>gi|409076284|gb|EKM76657.1| hypothetical protein AGABI1DRAFT_122567 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 755
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 186/344 (54%), Gaps = 27/344 (7%)
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFN 501
+ARS ILVKN+PY T ++ LF P G L RVLVPP G +VEF + ++A F
Sbjct: 407 TKARSDTTILVKNIPYGTTLDQIRDLFTPHGQLSRVLVPPAGTMAVVEFERPDEASKGFK 466
Query: 502 SLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQG 561
++AY + +YLE P G+F + E + G K
Sbjct: 467 AVAYRRLGNSVIYLEKGPSGMFTD--------EPIQTAAGGPSSLPVVK----------- 507
Query: 562 VPEVEENV-EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
+PE E + EE TLY+KNL+F +T++ + F+ A + K DPK
Sbjct: 508 IPEQESTGGDAGEEVSITGGMTLYVKNLSFVTTQERFAQVFQHLPSFAFARIQTKPDPKQ 567
Query: 621 P-GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN 679
P G LSMGYGF+ F E +ALK +Q LD H + +K + R +E + K K
Sbjct: 568 PSGPRLSMGYGFIGFKDVEGAKKALKSIQGFVLDGHSLHVKFAGRGVEEDE--AKNKDGV 625
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
+K +K++V+N+PF+A + ++ +LF A G LK VRLPKK RGF F+EF++++
Sbjct: 626 NSKSRTTKVIVKNVPFEATKKDIRDLFSAHGHLKSVRLPKKF--DSRTRGFAFLEFVSRH 683
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWAEEAD-NVEDIRKRTNRYFG 782
EA+ A AL + THL GR LVLEWAEEA+ +++ +R++ FG
Sbjct: 684 EAENAFNAL-RHTHLLGRHLVLEWAEEAEQDLDVLRQKAGVGFG 726
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 59/93 (63%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I + R+F+RNL+++ TE DL +LF +G +++V +P+D + + KG A VTF
Sbjct: 223 ETILRTHRLFLRNLAFSCTETDLLELFRSHGDISQVHIPLDSLSKQPKGLAFVTFATGAD 282
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVD 423
AT AY+ LD F GR+LH++P + ++ V+
Sbjct: 283 ATSAYEALDKKSFQGRLLHILPAQDQQRPFGVE 315
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 137/318 (43%), Gaps = 35/318 (11%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKALNKNK 279
R TI+VKN+P G ++ F P L+ V G MA + F+ +K K
Sbjct: 410 RSDTTILVKNIPYGTTLDQIRDLFTPHGQLSRVLVPPAGTMAVVEFERPDEASKGF-KAV 468
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA-EDIAESG- 337
++ + IY K S ++ ++ QE + A E+++ +G
Sbjct: 469 AYRRLGNSVIY-LEKGPSGMFTDEPIQTAAGGPSSLPVVKIPEQESTGGDAGEEVSITGG 527
Query: 338 -RIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL---PIDKETDKTK---GFALVTFLMPEH 390
++V+NLS+ T++ ++F+ A + P K+ + G+ + F E
Sbjct: 528 MTLYVKNLSFVTTQERFAQVFQHLPSFAFARIQTKPDPKQPSGPRLSMGYGFIGFKDVEG 587
Query: 391 ATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A +A + + G V G LH+ G+ E + + D N ++R+ ++
Sbjct: 588 AKKALKSIQGFVLDGHSLHVKFAGRGVEED-----------EAKNKDGVNS--KSRTTKV 634
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSL 503
I VKN+P+ D++ LF G L V +P G +EF+ +++A+ AFN+L
Sbjct: 635 I-VKNVPFEATKKDIRDLFSAHGHLKSVRLPKKFDSRTRGF-AFLEFVSRHEAENAFNAL 692
Query: 504 AYTKFKEVPLYLEWAPEG 521
+T L LEWA E
Sbjct: 693 RHTHLLGRHLVLEWAEEA 710
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 139/309 (44%), Gaps = 67/309 (21%)
Query: 29 ITQEQLKAKFEEKGT----VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
+T +L+ FE++G +TDV++ Y ++G RRF F+GY +++A AA ++F+ T++
Sbjct: 13 VTPVRLRQHFEQQGCPAGILTDVKVAYKSDGTSRRFGFVGYKTDEEAFAARNWFDKTFID 72
Query: 85 SSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKND 144
S+RI V D P+ N P+ P T + P ++SK+D
Sbjct: 73 STRIHVTLIDGSKDAPAPRP---------------NKRPRLGPSPIET-NPLPIRESKSD 116
Query: 145 PTF---------SDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQ--IAHADISDME 193
+ +FL++ K +K P+ + + K+ +++ ++ + A +SD E
Sbjct: 117 KSMMKEKLPSQAEEFLEVM-KPRTKKGPIWANEAQPKDIRPQEQLVDKAPVNTATLSDAE 175
Query: 194 YLKLK------------------TKSKDTAPSDPSVPPVSKAPVHKRQ----YHTIVVKN 231
++K + +++ D PS P V R+ H + ++N
Sbjct: 176 WMKQRMSNNVDNEGKAFEQSDEESENPDPKPSLPDPMDVGSPQDVARETILRTHRLFLRN 235
Query: 232 LPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGF---KDEKNCNKALNKNKS 280
L + DL F+ +PL S+ G+A++ F D + +AL+K KS
Sbjct: 236 LAFSCTETDLLELFRSHGDISQVHIPLDSLSKQPKGLAFVTFATGADATSAYEALDK-KS 294
Query: 281 FWKGKQLNI 289
F +G+ L+I
Sbjct: 295 F-QGRLLHI 302
>gi|391867843|gb|EIT77082.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 826
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 190/341 (55%), Gaps = 32/341 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
+DAF + R ILVKN Y DL+ LFEPFG L R+L+PP G +VEF + +
Sbjct: 475 IDAFKE--RERGNTAILVKNFSYGVKTDDLRKLFEPFGQLTRLLMPPSGTIAIVEFARPD 532
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY K + L+LE AP+ +F + K + K +G +TA
Sbjct: 533 EAQKAFKGLAYRKLGDSILFLEKAPKNLFDASVAPQKPIVETKAISQGF--------STA 584
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ +E E TL++KNLNF++T F+ S +
Sbjct: 585 D------------TFAAEEPEEAIATATLFVKNLNFDTTNARFVEVFQPLDGFVSARIKT 632
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GFV F T++ AL + LD+H + ++ S++ +++ +
Sbjct: 633 KPDPKRPGQTLSMGFGFVDFRTKDQAQAALAAMNGYKLDQHALVVRSSHKGMDAAE---E 689
Query: 675 RKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGFG
Sbjct: 690 RRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGFG 747
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA-EEADNVE 771
F +F++ EA+ AM AL ++THL GR+LVLE+A EEA + E
Sbjct: 748 FADFVSAREAENAMDAL-KNTHLLGRKLVLEFANEEAIDAE 787
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E+I S R+FVRNLSY E DL +F +G + E+ + D +KGFA V ++ +
Sbjct: 297 ENIRISARLFVRNLSYDTKESDLEPVFAPFGRIEEIHVAFDTRFSSSKGFAYVQYVESDA 356
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A +AY+ LDG F GR+LH++P K+
Sbjct: 357 AVEAYKALDGKHFQGRLLHILPAAAKKT 384
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 151/375 (40%), Gaps = 86/375 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N SY V DDL KLFE +G L +++P + A+V F P+ A +A++ L
Sbjct: 488 ILVKNFSYGVKTDDLRKLFEPFGQLTRLLMP------PSGTIAIVEFARPDEAQKAFKGL 541
Query: 399 ------DGTVFLGRM------LHLIPGKPKENEGNVDGKVHCCISERKLDAF--NQVVEA 444
D +FL + + P KP + D F + EA
Sbjct: 542 AYRKLGDSILFLEKAPKNLFDASVAPQKPIVETKAISQGFSTA------DTFAAEEPEEA 595
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPP----YGIT-----GLVEFLQK 493
+ + VKNL + T +F+P R+ P G T G V+F K
Sbjct: 596 IATATLFVKNLNFDTTNARFVEVFQPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTK 655
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+QA+AA ++ K + L + + +G+ A EE ++E+T
Sbjct: 656 DQAQAALAAMNGYKLDQHALVVRSSHKGMDA--------------------AEERRREDT 695
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
A++ + T + IKNL F +T+ +R F G + SV V
Sbjct: 696 AKKIAARR-------------------TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP 736
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
+K D + G+GF F + A+ L+N+ L ++ L+ +N EA
Sbjct: 737 KKFDRS------ARGFGFADFVSAREAENAMDALKNTHLLGRKLVLEFANE----EAIDA 786
Query: 674 KRKSSNVAKQTGSKI 688
+++ + K+ G ++
Sbjct: 787 EQEIQQIEKKVGEQM 801
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 246 KPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAAD 305
KP P +T +G ++ F+ + AL +N YK + S
Sbjct: 633 KPDPKRPGQTLSMGFGFVDFRTKDQAQAAL---------AAMNGYKLDQHALVVRS---- 679
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
S + + A + +ED+ + + A +I ++NL + T+ D+ LF YG L
Sbjct: 680 -----SHKGMDAAEERRREDTAK--KIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRS 732
Query: 366 VILPIDKETDKT-KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
V +P K+ D++ +GF F+ A A L T LGR L L
Sbjct: 733 VRVP--KKFDRSARGFGFADFVSAREAENAMDALKNTHLLGRKLVL 776
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+ +++ VRN+ + K+S++E +F FG ++ + + S +GF +V+++ + A
Sbjct: 300 RISARLFVRNLSYDTKESDLEPVFAPFGRIEEIHVAFDTRFSS-SKGFAYVQYVESDAAV 358
Query: 743 RAMKALCQSTHLYGRRL 759
A KAL H GR L
Sbjct: 359 EAYKAL-DGKHFQGRLL 374
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +QL+ F + VTD + RR F+G + A+ A YFN TYV S+I
Sbjct: 15 FSNDQLRKHFASRFQVTDAHVLPK-----RRIGFVGLKTPEAAKEAAKYFNKTYVKMSKI 69
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHT-----KDSKPGKKSKN 143
V D KP DS H K+ KP+ T K + G+ ++
Sbjct: 70 SV-------DIAKPI-------DSEPISAAHKF--KKGDKPDSTAENTLKRKRDGEPTQQ 113
Query: 144 DPTFSDFLQL 153
DP ++L L
Sbjct: 114 DPKLQEYLSL 123
>gi|121702823|ref|XP_001269676.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
gi|119397819|gb|EAW08250.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
Length = 822
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 186/333 (55%), Gaps = 31/333 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF Q R ILVKN Y D++ LFEP+G L R+L+PP G +VEF + +
Sbjct: 470 LDAFKQ--RERGNTAILVKNFSYGVKTDDIRKLFEPYGQLTRLLMPPSGTMAIVEFSRPD 527
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY K + L+LE AP+ +F K + K +G +TA
Sbjct: 528 EAQKAFKGLAYRKLGDSILFLEKAPKDLFEATGVPQKPVLETKAVSQGF--------STA 579
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ +E P +TL++KNLNF++T D F+ S +
Sbjct: 580 D------------TFAAEEADGPVVASTLFVKNLNFSTTNDKFVDLFRPLDGFVSARIKT 627
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GFV F ++ AL + LD+H++ ++ SN+ +++ +
Sbjct: 628 KPDPKRPGQTLSMGFGFVDFKSKAQAQAALAAMDGYRLDQHELVVRASNKAMDAAE---E 684
Query: 675 RKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+P+K S RGFG
Sbjct: 685 RRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPQKFDRSA--RGFG 742
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
F +F++ EA+ AM AL ++THL GRRLVLE+A
Sbjct: 743 FADFVSAREAENAMDAL-KNTHLLGRRLVLEFA 774
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
++I S R+FVRNL Y E DL +F KYG + E+ + D + +KGFA V + +
Sbjct: 292 DNIRISSRLFVRNLPYDAKESDLEPIFSKYGKVEEIHVAFDTRSTTSKGFAYVQYFDADA 351
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A QAY+ LDG F GR+LH++P K
Sbjct: 352 AVQAYKELDGKHFQGRLLHILPATAK 377
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 149/373 (39%), Gaps = 82/373 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N SY V DD+ KLFE YG L +++P + A+V F P+ A +A++ L
Sbjct: 483 ILVKNFSYGVKTDDIRKLFEPYGQLTRLLMP------PSGTMAIVEFSRPDEAQKAFKGL 536
Query: 399 ------DGTVFLGRM------LHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARS 446
D +FL + +P KP V + +A VV +
Sbjct: 537 AYRKLGDSILFLEKAPKDLFEATGVPQKPVLETKAVSQGFSTADTFAAEEADGPVVAS-- 594
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPY----GIT-----GLVEFLQKNQ 495
+ VKNL + T LF P R+ P G T G V+F K Q
Sbjct: 595 --TLFVKNLNFSTTNDKFVDLFRPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFKSKAQ 652
Query: 496 AKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAE 555
A+AA ++ + + L + + + + A EE ++E+TA+
Sbjct: 653 AQAALAAMDGYRLDQHELVVRASNKAMDA--------------------AEERRREDTAK 692
Query: 556 EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARK 615
+ + T + IKNL F +T+ +R F G + SV V +K
Sbjct: 693 KIAARR-------------------TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPQK 733
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR 675
D + G+GF F + A+ L+N+ L ++ L+ +N +EA ++
Sbjct: 734 FDRS------ARGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFAN----AEAIDAEQ 783
Query: 676 KSSNVAKQTGSKI 688
+ + K+ G ++
Sbjct: 784 EIQQIEKKVGEQL 796
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 310 ASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP 369
AS + + A + +ED+ + + A +I ++NL + T+ D+ LF YG L V +P
Sbjct: 674 ASNKAMDAAEERRREDTAK--KIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP 731
Query: 370 IDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
K +GF F+ A A L T LGR L L
Sbjct: 732 -QKFDRSARGFGFADFVSAREAENAMDALKNTHLLGRRLVL 771
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+ S++ VRN+P+ AK+S++E +F +G+++ + + S +GF +V++ + A
Sbjct: 295 RISSRLFVRNLPYDAKESDLEPIFSKYGKVEEIHVAFD-TRSTTSKGFAYVQYFDADAAV 353
Query: 743 RAMKALCQSTHLYGRRL 759
+A K L H GR L
Sbjct: 354 QAYKEL-DGKHFQGRLL 369
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
T +QL+ F + VTD + RR F+G+ + AQ A YFN T+V S+I
Sbjct: 15 FTNDQLRNHFSSRFQVTDAHVLPK-----RRIGFVGFKSPEVAQQAASYFNKTFVKMSKI 69
Query: 89 KVE 91
VE
Sbjct: 70 SVE 72
>gi|297804178|ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315809|gb|EFH46232.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 788
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 190/349 (54%), Gaps = 59/349 (16%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RSK I+LVKNLP+ + +L +F FG L ++++PP LV FL+ +A+AA ++
Sbjct: 456 RSKHILLVKNLPFASTEKELAQMFGKFGSLDKIILPPTKTMALVVFLEPAEARAALKGMS 515
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y ++K+ PLYLEWAP + E DN + +
Sbjct: 516 YKRYKDAPLYLEWAPGNIL---------------------------EPKTLPDNNEEKSD 548
Query: 565 VEEN----VEEDEEREPEPDTT----LYIKNLNFNSTEDSIRRHFKKC---GPIASVTVA 613
VEEN V +++ E +PD T L++KNL+F +T+D +++H K G I SV +
Sbjct: 549 VEENGVRRVNLEQQVEIDPDVTESNVLHVKNLSFKTTDDGLKKHLTKLVKQGKILSVKII 608
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
+ G+ LS GYGFV+F + E+ + LQ + LD H + L+
Sbjct: 609 KH---VKNGKNLSRGYGFVEFDSVETATNVYRDLQGTVLDGHALILRFCE---------- 655
Query: 674 KRKSSNVAKQTG-----SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 728
++S K +G +K+ V+N+ F+A + E+++LF FG++K +RLPK+ + +
Sbjct: 656 NKRSDKAGKDSGKDKPSTKLHVKNVAFEATKKELKQLFSPFGQIKSMRLPKRNIEQ--YA 713
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRT 777
GF FVEF+TK EA A KAL STH YGR LVLEWA + +++E IRKR+
Sbjct: 714 GFAFVEFVTKQEALNAKKALS-STHFYGRHLVLEWANDDNSMEAIRKRS 761
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 65/88 (73%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
++D+ ++GR+FVRNL YT TE++L + F K+G ++EV L +DKET +++G A + + +PE
Sbjct: 258 SDDVLDTGRLFVRNLPYTATEEELMEHFSKFGEISEVHLVLDKETKRSRGIAYILYPIPE 317
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKE 417
A +A + LD + F GR+LH++P K +E
Sbjct: 318 CAARAMEELDNSSFQGRLLHVLPAKHRE 345
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 138/576 (23%), Positives = 229/576 (39%), Gaps = 104/576 (18%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRR-FAFIGYHREDQAQAALDYFNNTYVFS 85
Y T+E+L F + G +++V L E K R A+I Y + A A++ +N+ F
Sbjct: 274 YTATEEELMEHFSKFGEISEVHLVLDKETKRSRGIAYILYPIPECAARAMEELDNSS-FQ 332
Query: 86 SRI--------------KVEKCSNLGDTTKPK-----SWSKYAPDSSAYQKLHNIAPKQD 126
R+ +V SNL T K K S+ ++ A+ L
Sbjct: 333 GRLLHVLPAKHRETSDKQVNDTSNLPKTFKQKREEQRKASEAGGNTKAWNSLF------- 385
Query: 127 LKPEHTKDSKPGKKSKNDPTFSDFLQLHGKDVSKLLPLSNKD-------GEEKEEENEDE 179
++P D + ++++G S+LL +D GE K E
Sbjct: 386 MRP--------------DTILENIVRVYGVSKSELLDREAEDPAVRLALGETKVIA---E 428
Query: 180 SNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKK 239
+ +A A ++ + T++ D + R H ++VKNLP +K
Sbjct: 429 TKEALAKAGVNVTSLEEFATRNGDE---------------NNRSKHILLVKNLPFASTEK 473
Query: 240 DLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIY-KYSK 294
+L F S+ L MA + F + AL K S+ + K +Y +++
Sbjct: 474 ELAQMFGKF--GSLDKIILPPTKTMALVVFLEPAEARAAL-KGMSYKRYKDAPLYLEWAP 530
Query: 295 DNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDL- 353
N + D+N S + E V+ D+ ES + V+NLS+ T+D L
Sbjct: 531 GNILEPKTLPDNNEEKSDVEENGVRRVNLEQQVEIDPDVTESNVLHVKNLSFKTTDDGLK 590
Query: 354 ---TKLFEKYGPLA-EVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLH 409
TKL ++ L+ ++I + + ++G+ V F E AT Y+ L GTV G L
Sbjct: 591 KHLTKLVKQGKILSVKIIKHVKNGKNLSRGYGFVEFDSVETATNVYRDLQGTVLDGHALI 650
Query: 410 LIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFE 469
L C ++R A + + + VKN+ + +LK LF
Sbjct: 651 L----------------RFCENKRSDKAGKDSGKDKPSTKLHVKNVAFEATKKELKQLFS 694
Query: 470 PFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFA 524
PFG + + +P I VEF+ K +A A +L+ T F L LEWA +
Sbjct: 695 PFGQIKSMRLPKRNIEQYAGFAFVEFVTKQEALNAKKALSSTHFYGRHLVLEWANDDNSM 754
Query: 525 EAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQ 560
EA K + K +EE + ++ K +ED +
Sbjct: 755 EAIRK---RSAAKLDEENDNAKKRKSSKAVDEDKNE 787
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+++NL + +TE+ + HF K G I+ V + K+ K S G ++ + E +
Sbjct: 267 LFVRNLPYTATEEELMEHFSKFGEISEVHLVLDKETKR-----SRGIAYILYPIPECAAR 321
Query: 643 ALKVLQNSSL 652
A++ L NSS
Sbjct: 322 AMEELDNSSF 331
>gi|238486470|ref|XP_002374473.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
gi|220699352|gb|EED55691.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
Length = 826
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 190/341 (55%), Gaps = 32/341 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
+DAF + R ILVKN Y DL+ LFEPFG L R+L+PP G +VEF + +
Sbjct: 475 IDAFKE--RERGNTAILVKNFSYGVKTDDLRKLFEPFGQLTRLLMPPSGTIAIVEFARPD 532
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY K + L+LE AP+ +F + K + K +G +TA
Sbjct: 533 EAQKAFKGLAYRKLGDSILFLEKAPKNLFDASVAPQKPIVETKAISQGF--------STA 584
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ +E E TL++KNLNF++T F+ S +
Sbjct: 585 D------------TFAAEEPEEAIATATLFVKNLNFDTTNARFVEVFQPLDGFVSARIKT 632
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GFV F T++ AL + LD+H + ++ S++ +++ +
Sbjct: 633 KPDPKRPGQTLSMGFGFVDFRTKDQAQAALAAMNGYKLDQHALVVRSSHKGMDAAE---E 689
Query: 675 RKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGFG
Sbjct: 690 RRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGFG 747
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA-EEADNVE 771
F +F++ EA+ AM AL ++THL GR+LVLE+A EEA + E
Sbjct: 748 FADFVSAREAENAMDAL-KNTHLLGRKLVLEFANEEAIDAE 787
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E+I S R+FVRNLSY E DL +F +G + E+ + D +KGFA V ++ +
Sbjct: 297 ENIRISARLFVRNLSYDTKESDLEPVFAPFGRIEEIHVAFDTRFSSSKGFAYVQYVESDA 356
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A +AY+ LDG F GR+LH++P K+
Sbjct: 357 AVEAYKALDGKHFQGRLLHILPAAAKKT 384
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 151/375 (40%), Gaps = 86/375 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N SY V DDL KLFE +G L +++P + A+V F P+ A +A++ L
Sbjct: 488 ILVKNFSYGVKTDDLRKLFEPFGQLTRLLMP------PSGTIAIVEFARPDEAQKAFKGL 541
Query: 399 ------DGTVFLGRM------LHLIPGKPKENEGNVDGKVHCCISERKLDAF--NQVVEA 444
D +FL + + P KP + D F + EA
Sbjct: 542 AYRKLGDSILFLEKAPKNLFDASVAPQKPIVETKAISQGFSTA------DTFAAEEPEEA 595
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPP----YGIT-----GLVEFLQK 493
+ + VKNL + T +F+P R+ P G T G V+F K
Sbjct: 596 IATATLFVKNLNFDTTNARFVEVFQPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTK 655
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+QA+AA ++ K + L + + +G+ A EE ++E+T
Sbjct: 656 DQAQAALAAMNGYKLDQHALVVRSSHKGMDA--------------------AEERRREDT 695
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
A++ + T + IKNL F +T+ +R F G + SV V
Sbjct: 696 AKKIAARR-------------------TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP 736
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
+K D + G+GF F + A+ L+N+ L ++ L+ +N EA
Sbjct: 737 KKFDRS------ARGFGFADFVSAREAENAMDALKNTHLLGRKLVLEFANE----EAIDA 786
Query: 674 KRKSSNVAKQTGSKI 688
+++ + K+ G ++
Sbjct: 787 EQEIQQIEKKVGEQM 801
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 246 KPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAAD 305
KP P +T +G ++ F+ + AL +N YK + S
Sbjct: 633 KPDPKRPGQTLSMGFGFVDFRTKDQAQAAL---------AAMNGYKLDQHALVVRS---- 679
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
S + + A + +ED+ + + A +I ++NL + T+ D+ LF YG L
Sbjct: 680 -----SHKGMDAAEERRREDTAK--KIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRS 732
Query: 366 VILPIDKETDKT-KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
V +P K+ D++ +GF F+ A A L T LGR L L
Sbjct: 733 VRVP--KKFDRSARGFGFADFVSAREAENAMDALKNTHLLGRKLVL 776
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+ +++ VRN+ + K+S++E +F FG ++ + + S +GF +V+++ + A
Sbjct: 300 RISARLFVRNLSYDTKESDLEPVFAPFGRIEEIHVAFDTRFSS-SKGFAYVQYVESDAAV 358
Query: 743 RAMKALCQSTHLYGRRL 759
A KAL H GR L
Sbjct: 359 EAYKAL-DGKHFQGRLL 374
Score = 39.7 bits (91), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +QL+ F + VTD + RR F+G + A+ A YFN TYV S+I
Sbjct: 15 FSNDQLRKHFASRFQVTDAHVLPK-----RRIGFVGLKTPEAAKEAAKYFNKTYVKMSKI 69
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHT-----KDSKPGKKSKN 143
V D KP DS H K+ KP+ T K + G+ ++
Sbjct: 70 SV-------DIAKPI-------DSEPISAAHKF--KKGDKPDSTAENTLKRKRDGEPTQQ 113
Query: 144 DPTFSDFLQL 153
DP ++L L
Sbjct: 114 DPKLQEYLSL 123
>gi|169771029|ref|XP_001819984.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
oryzae RIB40]
gi|83767843|dbj|BAE57982.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 825
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 190/341 (55%), Gaps = 32/341 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
+DAF + R ILVKN Y DL+ LFEPFG L R+L+PP G +VEF + +
Sbjct: 474 IDAFKE--RERGNTAILVKNFSYGVKTDDLRKLFEPFGQLTRLLMPPSGTIAIVEFARPD 531
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY K + L+LE AP+ +F + K + K +G +TA
Sbjct: 532 EAQKAFKGLAYRKLGDSILFLEKAPKNLFDASVAPQKPIVETKAISQGF--------STA 583
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ +E E TL++KNLNF++T F+ S +
Sbjct: 584 D------------TFAAEEPEEAIATATLFVKNLNFDTTNARFVEVFQPLDGFVSARIKT 631
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GFV F T++ AL + LD+H + ++ S++ +++ +
Sbjct: 632 KPDPKRPGQTLSMGFGFVDFRTKDQAQAALAAMNGYKLDQHALVVRSSHKGMDAAE---E 688
Query: 675 RKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGFG
Sbjct: 689 RRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGFG 746
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA-EEADNVE 771
F +F++ EA+ AM AL ++THL GR+LVLE+A EEA + E
Sbjct: 747 FADFVSAREAENAMDAL-KNTHLLGRKLVLEFANEEAIDAE 786
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E+I S R+FVRNLSY E DL +F +G + E+ + D +KGFA V ++ +
Sbjct: 296 ENIRISARLFVRNLSYDTKESDLEPVFAPFGRIEEIHVAFDTRFSSSKGFAYVQYVESDA 355
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A +AY+ LDG F GR+LH++P K+
Sbjct: 356 AVEAYKALDGKHFQGRLLHILPAAAKKT 383
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 151/375 (40%), Gaps = 86/375 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N SY V DDL KLFE +G L +++P + A+V F P+ A +A++ L
Sbjct: 487 ILVKNFSYGVKTDDLRKLFEPFGQLTRLLMP------PSGTIAIVEFARPDEAQKAFKGL 540
Query: 399 ------DGTVFLGRM------LHLIPGKPKENEGNVDGKVHCCISERKLDAF--NQVVEA 444
D +FL + + P KP + D F + EA
Sbjct: 541 AYRKLGDSILFLEKAPKNLFDASVAPQKPIVETKAISQGFSTA------DTFAAEEPEEA 594
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPP----YGIT-----GLVEFLQK 493
+ + VKNL + T +F+P R+ P G T G V+F K
Sbjct: 595 IATATLFVKNLNFDTTNARFVEVFQPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTK 654
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+QA+AA ++ K + L + + +G+ A EE ++E+T
Sbjct: 655 DQAQAALAAMNGYKLDQHALVVRSSHKGMDA--------------------AEERRREDT 694
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
A++ + T + IKNL F +T+ +R F G + SV V
Sbjct: 695 AKKIAARR-------------------TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP 735
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
+K D + G+GF F + A+ L+N+ L ++ L+ +N EA
Sbjct: 736 KKFDRS------ARGFGFADFVSAREAENAMDALKNTHLLGRKLVLEFANE----EAIDA 785
Query: 674 KRKSSNVAKQTGSKI 688
+++ + K+ G ++
Sbjct: 786 EQEIQQIEKKVGEQM 800
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 246 KPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAAD 305
KP P +T +G ++ F+ + AL +N YK + S
Sbjct: 632 KPDPKRPGQTLSMGFGFVDFRTKDQAQAAL---------AAMNGYKLDQHALVVRS---- 678
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
S + + A + +ED+ + + A +I ++NL + T+ D+ LF YG L
Sbjct: 679 -----SHKGMDAAEERRREDTAK--KIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRS 731
Query: 366 VILPIDKETDKT-KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
V +P K+ D++ +GF F+ A A L T LGR L L
Sbjct: 732 VRVP--KKFDRSARGFGFADFVSAREAENAMDALKNTHLLGRKLVL 775
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+ +++ VRN+ + K+S++E +F FG ++ + + S +GF +V+++ + A
Sbjct: 299 RISARLFVRNLSYDTKESDLEPVFAPFGRIEEIHVAFDTRFSS-SKGFAYVQYVESDAAV 357
Query: 743 RAMKALCQSTHLYGRRL 759
A KAL H GR L
Sbjct: 358 EAYKAL-DGKHFQGRLL 373
>gi|449303128|gb|EMC99136.1| hypothetical protein BAUCODRAFT_120428 [Baudoinia compniacensis
UAMH 10762]
Length = 822
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 191/671 (28%), Positives = 304/671 (45%), Gaps = 108/671 (16%)
Query: 145 PTFSDFLQLHGKDVSKLLPLSNKD------GEEKEEENEDESNNQIAHADISDMEYLKLK 198
PT SD + S+LL L + D G E++ +DES +AD+ ++
Sbjct: 206 PTVSDADWTRSR-TSRLLGLLDDDEEETLAGSERQPRIDDES-----YADVPAKGNKNVR 259
Query: 199 TKSKDTAPSDPSVPPVSKAPVHK--------------RQYHTIVVKNLPAGVKKKDLKAY 244
+D A S PS P S+ + R + V+NLP K+DL+A
Sbjct: 260 PAVEDPANSLPSPPADSQTLGTETTRILDSASDVDAVRSSMRLFVRNLPYSATKEDLEAE 319
Query: 245 FKPLP-LASVRTTFL-------GMAYIGFKDEKNCNKALN-KNKSFWKGKQLNIYKYSKD 295
F+P LA+V + G A+I + D +AL K+ ++G+ L+I
Sbjct: 320 FEPFGNLAAVHVSMSKKTGSAKGFAFIQYSDADAAERALREKDGQTFQGRLLHILP---- 375
Query: 296 NSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTK 355
AK DD + + K + K + ++ S + F N Y + ++
Sbjct: 376 GKAKREDKLDDFELSKLPLKKQQEIKRRREA---------SSKTFNWNALYMNADAVVSS 426
Query: 356 LFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKP 415
+ E+ G +L D T A V QA+ H+I
Sbjct: 427 VAERLGIAKSAVL------DPTSSDAAVK--------QAHAET----------HVI---- 458
Query: 416 KENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLG 475
E K H LD+F R IL KN+P+ +LK FE G++
Sbjct: 459 --QETKAYFKQHGV----DLDSFK--TSKRGDTAILAKNIPFDFSKDELKRRFEEHGEVK 510
Query: 476 RVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEK 535
+ L+PP G +VEF Q +AA+ +LAY + K L+LE AP+ +F K
Sbjct: 511 KFLMPPSGAIAIVEFANAEQCRAAYGALAYRRVKSSILFLEKAPQDLF---------NAK 561
Query: 536 EKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTED 595
E+ G E + +A + V ++ TL+++NLNF++T
Sbjct: 562 PATSEDTNGGAEGVTKTSASDLKDSAKVAVADSATT---------ATLFVRNLNFSTTTQ 612
Query: 596 SIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEH 655
+ F S V K D K PGQ LSMG+GF++F T + AL+ + +LD H
Sbjct: 613 HLTETFSPLSGFLSARVKTKTDAKKPGQILSMGFGFLEFRTAQQAQAALQAMDGYTLDGH 672
Query: 656 QIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFV 715
+++++ S++ ++A +R + + T +KI+++N+PF+A + +V LF AFG+L+ V
Sbjct: 673 RLQIRASHKG--ADAAEERRHADAAKRGTKTKIIIKNLPFEATKKDVRALFGAFGQLRSV 730
Query: 716 RLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVEDIR 774
R+PKKM + RGF F +F T EA+ AM+AL ++THL GRRLVL++AE +A++ E
Sbjct: 731 RVPKKMDRAA--RGFAFADFTTPKEAESAMEAL-RNTHLLGRRLVLDFAEGDAEDAEAEI 787
Query: 775 KRTNRYFGTAV 785
+R G V
Sbjct: 788 ERMQAKVGAQV 798
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
++E+L+ F G VTDV++ RR ++GY + + AQ A+ Y N +++ SRI
Sbjct: 14 FSEEELRKHF--PGNVTDVRIFPN-----RRIGYVGYSKPEDAQKAVKYHNKSFIRMSRI 66
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
VE +P S + P A Q+ P ++ + +++ +DP
Sbjct: 67 SVELARP---AKEPGSHEQQQPSPPA-QRREGGLPTNEIHSQRKREA----VDDDDPKLK 118
Query: 149 DFLQLHGKDVSKLLPLSNKD-GEEKEEENEDESNNQIAHAD-ISDMEYLKLKTKSKDTAP 206
+F+ DV K P + K G E EE ++ A A+ SD EY L+ K A
Sbjct: 119 EFM-----DVMK--PKTKKQKGWEGEEVPQEAPVEHTASAEKASDDEYEVLQKDVKTDAA 171
Query: 207 SDPSVP 212
P++P
Sbjct: 172 VAPAMP 177
>gi|119189731|ref|XP_001245472.1| hypothetical protein CIMG_04913 [Coccidioides immitis RS]
gi|392868364|gb|EAS34142.2| multiple RNA-binding domain-containing protein 1 [Coccidioides
immitis RS]
Length = 813
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 193/348 (55%), Gaps = 37/348 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F Q R ILVKN + DLK LF+P+G + R+L+PP G +VEF +
Sbjct: 462 LDSFKQ--RERGNTAILVKNFSFGVKAEDLKKLFDPYGQITRLLMPPSGTIAIVEFSMPD 519
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+ + AF LAY K + L+LE AP+G+F E K
Sbjct: 520 ECQKAFRGLAYRKLGDSILFLEKAPKGLF-----------------------EGKPTTHI 556
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPD---TTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
Q+ V E + EPE + +TLY++NLNF++T S+ FK S
Sbjct: 557 AVQPQKAVAPAFSTSETFKAGEPENEVESSTLYVRNLNFSTTTSSLMDVFKPLDGFLSAQ 616
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
V K DPK+PG+ LSMG+GFV+F TR AL + LD+H++ ++ S++ +S
Sbjct: 617 VKTKPDPKNPGERLSMGFGFVEFRTRAQAQAALAAMNGYKLDQHELVIRPSHKATDSAEQ 676
Query: 672 TVKRKSS--NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
++ ++ N A++T KI+++N+PFQA + +V+ LF A+G+L+ VR+PKK + RG
Sbjct: 677 QRRQDAAKKNAARRT--KIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPKKFDRTA--RG 732
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE--ADNVEDIRK 775
F F +F++ EA+ AM AL ++THL GR+LVLE+ E D E+I+K
Sbjct: 733 FAFADFVSAREAENAMDAL-RNTHLLGRKLVLEFVSEEAVDPEEEIQK 779
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I E+GR+F+RNL Y TE+DL F ++G L E+ + D +KGFA F P+ A
Sbjct: 286 IRETGRLFIRNLPYDTTEEDLQSEFARFGKLEELHVAFDSRHSTSKGFAYAQFFDPDSAI 345
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPK 416
+AY+ LDG F GR++H++P K
Sbjct: 346 EAYKQLDGKDFQGRLMHVLPASSK 369
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 131/338 (38%), Gaps = 80/338 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N S+ V +DL KLF+ YG + +++P + A+V F MP+ +A++ L
Sbjct: 475 ILVKNFSFGVKAEDLKKLFDPYGQITRLLMP------PSGTIAIVEFSMPDECQKAFRGL 528
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGK--VHCCISERK--LDAFNQVVEARS-------- 446
LG + + PK G +GK H + +K AF+ ++
Sbjct: 529 -AYRKLGDSILFLEKAPK---GLFEGKPTTHIAVQPQKAVAPAFSTSETFKAGEPENEVE 584
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPP----------YGITGLVEFLQKN 494
+ V+NL + T + L +F+P +V P G G VEF +
Sbjct: 585 SSTLYVRNLNFSTTTSSLMDVFKPLDGFLSAQVKTKPDPKNPGERLSMGF-GFVEFRTRA 643
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
QA+AA ++ K + L + + K + E + ++ K+N A
Sbjct: 644 QAQAALAAMNGYKLDQHELVI---------------RPSHKATDSAEQQRRQDAAKKNAA 688
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
T + IKNL F +T+ ++ F G + SV V +
Sbjct: 689 RR------------------------TKIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPK 724
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
K D + G+ F F + A+ L+N+ L
Sbjct: 725 KFD------RTARGFAFADFVSAREAENAMDALRNTHL 756
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 38/167 (22%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ + L++ F + VTD + RR F+G+ + AQ A++YFN T++ S+I
Sbjct: 15 LNNDGLRSHFASRFEVTDAHVIPK-----RRIGFVGFKDHNSAQNAVNYFNKTFIRMSKI 69
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSK------ 142
VE KP AP+ ++ K N +P+ + SK G +
Sbjct: 70 AVELA-------KP---VDAAPEVNSRSKARNSSPR-----DADTSSKSGSLKRKRGLEE 114
Query: 143 NDPTFSDFLQLH------------GKDVSKLLPLSNKDGEEKEEENE 177
+DP +FL G D++ LP NKD + E NE
Sbjct: 115 DDPKLQEFLNTMQAPTKTKTWADTGTDLTTSLPFHNKDSKNAEIPNE 161
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEH 390
+ A +I ++NL + T+ D+ LF YG L V +P K+ D+T +GFA F+
Sbjct: 686 NAARRTKIIIKNLPFQATKKDVQSLFGAYGQLRSVRVP--KKFDRTARGFAFADFVSARE 743
Query: 391 ATQAYQHLDGTVFLGRMLHL 410
A A L T LGR L L
Sbjct: 744 AENAMDALRNTHLLGRKLVL 763
>gi|392585482|gb|EIW74821.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 834
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 180/351 (51%), Gaps = 26/351 (7%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS ILVKN+PY T ++ +FEP G L R +VPP G +VEFL ++A AF ++A
Sbjct: 481 RSDTTILVKNIPYGTSEAQIREMFEPHGQLARAIVPPAGTIAVVEFLHADEAGKAFKAVA 540
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + +YLE P G+ + + GE K +++ G
Sbjct: 541 YRRLGNSVVYLEKGPLGMLRDPDDVPSSSAPATASLAISRGEAAKPVTIDDQEAGAGA-- 598
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR---KKDPKSP 621
+E +TL++KNL+F +T R + CG + AR K DPK P
Sbjct: 599 -------GDEPALSAGSTLFVKNLSFATTN---TRLSQACGALPGFAFARVQTKPDPKRP 648
Query: 622 GQ---FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSS 678
LSMGYGFV F T E ALK +Q LD H + +K + R E K SS
Sbjct: 649 SDPTARLSMGYGFVGFKTPEHARGALKSVQGLVLDGHALSVKFAGRGQEEVGQEGKGASS 708
Query: 679 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
K +K++V+N+PF+A + ++ ELF A G+LK VRLPKK RGF F+EF+T+
Sbjct: 709 ---KGRTTKMIVKNVPFEASKKDIRELFGAHGQLKSVRLPKKF--DSRSRGFAFLEFLTR 763
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAEE--ADNVEDIRKRTNRYFGTAVGL 787
EA+ A AL + THL GR LVL+WAEE A +V+ +R + FG L
Sbjct: 764 QEAENAYAAL-RHTHLLGRHLVLQWAEEDGATDVDALRAKAGVGFGGGAEL 813
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 305 DDNNNASMENIKAK-HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL 363
D+++N ++ KA ++++D + E I E+ R+F+RNL+++ TE+++ + F+ +G +
Sbjct: 262 DEDDNTRQDSTKATPEPEAEKDPAK--ETILETSRLFLRNLTFSCTEEEIREHFQPFGNI 319
Query: 364 AEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
++V +P+D T K KG A VTF A AY+ LD F GR+LH++P
Sbjct: 320 SQVHIPLDSSTRKPKGVAYVTFSEGASALSAYESLDKKSFQGRVLHILP 368
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 131/330 (39%), Gaps = 49/330 (14%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKA---- 274
+R TI+VKN+P G + ++ F+P LA G +A + F KA
Sbjct: 480 RRSDTTILVKNIPYGTSEAQIREMFEPHGQLARAIVPPAGTIAVVEFLHADEAGKAFKAV 539
Query: 275 ----LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA 330
L + + + L + + D + + A + E K QE
Sbjct: 540 AYRRLGNSVVYLEKGPLGMLRDPDDVPSSSAPATASLAISRGEAAKPVTIDDQEAGAGAG 599
Query: 331 EDIAESG--RIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----------PIDKETDKT 377
++ A S +FV+NLS+ T T+L + G L P D +
Sbjct: 600 DEPALSAGSTLFVKNLSFATTN---TRLSQACGALPGFAFARVQTKPDPKRPSDPTARLS 656
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLD 436
G+ V F PEHA A + + G V G L + G+ +E G +GK
Sbjct: 657 MGYGFVGFKTPEHARGALKSVQGLVLDGHALSVKFAGRGQEEVGQ-EGKGASS------- 708
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEF 490
+ R+ ++I VKN+P+ D++ LF G L V +P G +EF
Sbjct: 709 ------KGRTTKMI-VKNVPFEASKKDIRELFGAHGQLKSVRLPKKFDSRSRGFA-FLEF 760
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPE 520
L + +A+ A+ +L +T L L+WA E
Sbjct: 761 LTRQEAENAYAALRHTHLLGRHLVLQWAEE 790
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
Query: 29 ITQEQLKAKFEEKG----TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
+T ++L+ FE+KG T+TDV++ + +G RRF F+G+ E +A A ++FN TYV
Sbjct: 13 LTPDRLRKHFEQKGAPAGTITDVKVSFKPDGTSRRFGFVGFKSEAEALRAKEWFNRTYVD 72
Query: 85 SSRIKVE 91
S+RI V+
Sbjct: 73 STRITVD 79
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTT-LYIKNLNFNSTEDSIRRHFKKC 604
+ E +++ +D+ + PE E E+D +E +T+ L+++NL F+ TE+ IR HF+
Sbjct: 259 QSEDEDDNTRQDSTKATPEPE--AEKDPAKETILETSRLFLRNLTFSCTEEEIREHFQPF 316
Query: 605 GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
G I+ V + + P G +V F S A + L S
Sbjct: 317 GNISQVHIPLDSSTRKP-----KGVAYVTFSEGASALSAYESLDKKSF 359
>gi|380490988|emb|CCF35636.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 856
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 180/334 (53%), Gaps = 32/334 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF + R ILVKN P+ T +L+ +FE G + RVL+PP G +++F Q
Sbjct: 499 LDAFKS--QKRGDTTILVKNFPFGTTMEELRTMFEEHGTVLRVLMPPSGTIAIIDFAQPA 556
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
AKAAF LAY + K+ L+LE AP +F S + KE
Sbjct: 557 HAKAAFAKLAYRRIKDTVLFLEKAPRDLFKNDASVSMTQGKE------------------ 598
Query: 555 EEDNQQGVPE--VEENVEEDEEREPEPDTT-LYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
D GV + V E + DE+ E + TT L+++NLNF++T + + FK S
Sbjct: 599 --DRPAGVQKLSVTELLGRDEQGETDVVTTSLFVRNLNFSTTTEKLAETFKPLDGFVSAR 656
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
V K DPK PGQ LSMG+GFV F T+E AL+ + L+ H + +K S++ +A
Sbjct: 657 VKTKMDPKKPGQVLSMGFGFVVFKTKEQAQAALQAMDGFVLEGHTLAVKASHKG--QDAA 714
Query: 672 TVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
+R+ K G +KI+++N+PF+ + ++ LF +G+L+ VRLPKK RG
Sbjct: 715 EERRREDKARKAAGQRTKIVIKNLPFEVTKKDIRTLFGTYGQLRAVRLPKKF--GNTTRG 772
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
F F EF+ EA+ A+ AL + THL GRRLVL++
Sbjct: 773 FAFAEFVAPREAENALNAL-RDTHLLGRRLVLDY 805
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I S R+FVRNL ++ E+DL FE YG L EV LP+ +KGFA+V F E A
Sbjct: 324 IKRSSRLFVRNLPFSANEEDLRAHFEHYGELQEVHLPV-TVGGASKGFAMVQFTNAESAV 382
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEG 420
A+Q DG F GR+LH++P + K + G
Sbjct: 383 AAFQSTDGQTFQGRLLHVLPAEVKRDAG 410
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 132/326 (40%), Gaps = 53/326 (16%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKP--LPLASVRTTFLGMAYIGFKDEKNCNKALNK 277
KR TI+VKN P G ++L+ F+ L + +A I F + A K
Sbjct: 505 QKRGDTTILVKNFPFGTTMEELRTMFEEHGTVLRVLMPPSGTIAIIDFAQPAHAKAAFAK 564
Query: 278 NKSFWKGKQLNIYKYSKDNSAKYSGAADD--NNNASMENIKAKHWKS---QEDSV----- 327
Y+ KD A D N+AS+ + K + Q+ SV
Sbjct: 565 LA----------YRRIKDTVLFLEKAPRDLFKNDASVSMTQGKEDRPAGVQKLSVTELLG 614
Query: 328 ---QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL-----AEVILPIDKETDK--- 376
Q D+ + +FVRNL+++ T + KL E + PL A V +D +
Sbjct: 615 RDEQGETDVVTTS-LFVRNLNFSTTTE---KLAETFKPLDGFVSARVKTKMDPKKPGQVL 670
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+ GF V F E A A Q +DG V G L + K + D R+ D
Sbjct: 671 SMGFGFVVFKTKEQAQAALQAMDGFVLEGHTLAV-----KASHKGQD----AAEERRRED 721
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT----GLVEFL 491
+ R+K I++KNLP+ D++ LF +G L V +P +G T EF+
Sbjct: 722 KARKAAGQRTK--IVIKNLPFEVTKKDIRTLFGTYGQLRAVRLPKKFGNTTRGFAFAEFV 779
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEW 517
+A+ A N+L T L L++
Sbjct: 780 APREAENALNALRDTHLLGRRLVLDY 805
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 28 KITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
KIT+ + F G VTDV++ RR ++GY + A A+ YFN +Y+ S
Sbjct: 25 KITEADFRQHFSAGGREVTDVKVI-----PLRRIGYVGYKTPEVAAKAVKYFNRSYIRMS 79
Query: 87 RIKVEKCSNLGDT----TKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSK 142
RI VE + D T + Y SS + AP+ E KD+K +K +
Sbjct: 80 RINVELARPIADPAPQHTNGSTGQTYVATSSG-----SAAPQPSSIEE--KDAKKKRKRE 132
Query: 143 N----DPTFSDFLQLHG 155
+ DP +FLQ+ G
Sbjct: 133 DLDESDPKLREFLQVMG 149
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 124/344 (36%), Gaps = 89/344 (25%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N + T ++L +FE++G + V++P + A++ F P HA A+ L
Sbjct: 512 ILVKNFPFGTTMEELRTMFEEHGTVLRVLMP------PSGTIAIIDFAQPAHAKAAFAKL 565
Query: 399 ------DGTVFLGRM----------LHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
D +FL + + + GK G V + + + V
Sbjct: 566 AYRRIKDTVLFLEKAPRDLFKNDASVSMTQGKEDRPAGVQKLSVTELLGRDEQGETDVVT 625
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLV 488
+ + V+NL + T L F+P G+VL + G V
Sbjct: 626 TS-----LFVRNLNFSTTTEKLAETFKPLDGFVSARVKTKMDPKKPGQVLSMGF---GFV 677
Query: 489 EFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEE 548
F K QA+AA ++ + EG K KG++ EE
Sbjct: 678 VFKTKEQAQAALQAMDG-----------FVLEGHTLAVKASHKGQDA---------AEER 717
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
++E+ A + Q T + IKNL F T+ IR F G +
Sbjct: 718 RREDKARKAAGQ-------------------RTKIVIKNLPFEVTKKDIRTLFGTYGQLR 758
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+V + PK G + G+ F +F AL L+++ L
Sbjct: 759 AVRL-----PKKFGN-TTRGFAFAEFVAPREAENALNALRDTHL 796
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S++ VRN+PF A + ++ F+ +GEL+ V LP + G +GF V+F A A
Sbjct: 328 SRLFVRNLPFSANEEDLRAHFEHYGELQEVHLP--VTVGGASKGFAMVQFTNAESAVAAF 385
Query: 746 KALCQSTHLYGRRLVLEWAE 765
++ T GR L + AE
Sbjct: 386 QSTDGQT-FQGRLLHVLPAE 404
>gi|320033511|gb|EFW15459.1| multiple RNA-binding domain-containing protein 1 [Coccidioides
posadasii str. Silveira]
Length = 813
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 193/348 (55%), Gaps = 37/348 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F Q R ILVKN + DLK LF+P+G + R+L+PP G +VEF +
Sbjct: 462 LDSFKQ--RERGNTAILVKNFSFGVKAEDLKKLFDPYGQIMRLLMPPSGTIAIVEFSMPD 519
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+ + AF LAY K + L+LE AP+G+F E K
Sbjct: 520 ECQKAFRGLAYRKLGDSILFLEKAPKGLF-----------------------EGKPTTHI 556
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPD---TTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
Q+ V E + EPE + +TLY++NLNF++T S+ FK S
Sbjct: 557 AVQPQKAVAPAFSTSETFKAGEPENEVESSTLYVRNLNFSTTTASLMDVFKPLDGFLSAQ 616
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
V K DPK+PG+ LSMG+GFV+F TR AL + LD+H++ ++ S++ +S
Sbjct: 617 VKTKPDPKNPGERLSMGFGFVEFRTRAQAQAALAAMNGYKLDQHELVIRPSHKATDSAEQ 676
Query: 672 TVKRKSS--NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
++ ++ N A++T KI+++N+PFQA + +V+ LF A+G+L+ VR+PKK + RG
Sbjct: 677 QRRQDAAKKNAARRT--KIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPKKFDRTA--RG 732
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE--ADNVEDIRK 775
F F +F++ EA+ AM AL ++THL GR+LVLE+ E D E+I+K
Sbjct: 733 FAFADFVSAREAENAMDAL-RNTHLLGRKLVLEFVSEEAVDPEEEIQK 779
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 176/420 (41%), Gaps = 97/420 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ + L++ F + VTD + RR F+G+ + AQ A++YFN T++ S+I
Sbjct: 15 LNNDALRSHFASRFEVTDAHVIPK-----RRIGFVGFKDHNSAQNAVNYFNKTFIRMSKI 69
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSK------ 142
VE KP AP+ ++ K N +P+ + SK G +
Sbjct: 70 AVELA-------KP---VDAAPEVNSRSKARNSSPR-----DADTSSKSGSLKRKRGLEE 114
Query: 143 NDPTFSDFLQLH------------GKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADIS 190
+DP +FL G D++ LP N+D + E +E
Sbjct: 115 DDPKLQEFLNTMQAPTKTKTWADTGTDLTTSLPFHNEDSKNAEIPDE------------- 161
Query: 191 DMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDL----KAYFK 246
M ++K A +P +P S + ++L G++ ++L +A +
Sbjct: 162 -MPTKRVK------AALEPDLPEES----------SKTSQSLSTGLRNRELNNDAQATAE 204
Query: 247 PLP---------LASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNS 297
P L S + LG+ DE++ + + + + I +
Sbjct: 205 PTESAPQSDADWLRSRTSRLLGL----LDDEEDAGRPVAETTNASPPVSHRIQHEPTTDH 260
Query: 298 AKYSGAADDNNNA-SMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKL 356
+ S +DN+ A S + I A +V+ I E+GR+F+RNL Y TE+DL
Sbjct: 261 SDVSAEKEDNDPAGSTDAIDA--------NVKL---IRETGRLFIRNLPYDTTEEDLQSE 309
Query: 357 FEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
F ++G L E+ + D +KGFA F P+ A +AY+ LDG F GR++H++P K
Sbjct: 310 FARFGKLEELHIAFDSRHSTSKGFAYAQFFDPDSAIEAYKQLDGKDFQGRLMHVLPASSK 369
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 130/338 (38%), Gaps = 80/338 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N S+ V +DL KLF+ YG + +++P + A+V F MP+ +A++ L
Sbjct: 475 ILVKNFSFGVKAEDLKKLFDPYGQIMRLLMP------PSGTIAIVEFSMPDECQKAFRGL 528
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGK--VHCCISERK--LDAFNQVVEARS-------- 446
LG + + PK G +GK H + +K AF+ ++
Sbjct: 529 -AYRKLGDSILFLEKAPK---GLFEGKPTTHIAVQPQKAVAPAFSTSETFKAGEPENEVE 584
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPP----------YGITGLVEFLQKN 494
+ V+NL + T L +F+P +V P G G VEF +
Sbjct: 585 SSTLYVRNLNFSTTTASLMDVFKPLDGFLSAQVKTKPDPKNPGERLSMGF-GFVEFRTRA 643
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
QA+AA ++ K + L + + K + E + ++ K+N A
Sbjct: 644 QAQAALAAMNGYKLDQHELVI---------------RPSHKATDSAEQQRRQDAAKKNAA 688
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
T + IKNL F +T+ ++ F G + SV V +
Sbjct: 689 RR------------------------TKIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPK 724
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
K D + G+ F F + A+ L+N+ L
Sbjct: 725 KFD------RTARGFAFADFVSAREAENAMDALRNTHL 756
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHAT 392
A +I ++NL + T+ D+ LF YG L V +P K+ D+T +GFA F+ A
Sbjct: 688 ARRTKIIIKNLPFQATKKDVQSLFGAYGQLRSVRVP--KKFDRTARGFAFADFVSAREAE 745
Query: 393 QAYQHLDGTVFLGRMLHL 410
A L T LGR L L
Sbjct: 746 NAMDALRNTHLLGRKLVL 763
>gi|302307467|ref|NP_984131.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|442570228|sp|Q75A83.2|MRD1_ASHGO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|299789015|gb|AAS51955.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|374107347|gb|AEY96255.1| FADR035Cp [Ashbya gossypii FDAG1]
Length = 838
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/360 (36%), Positives = 199/360 (55%), Gaps = 24/360 (6%)
Query: 419 EGNVDGKVHCCISERKLDA-----FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGD 473
E +V G V R +D F +V E R RIILVKN P+ T +L LF PFG
Sbjct: 455 EAHVIGDVRKYFEARGVDLTQFEKFKKVTE-RDDRIILVKNFPHGTTREELAELFLPFGK 513
Query: 474 LGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGK 533
+ R+L+PP G ++++ A+ AF L+Y +FKE LYLE P+ F+ + +G
Sbjct: 514 IERLLMPPSGTIAIIQYRDVPAARGAFTKLSYKRFKEAILYLEKGPKDCFS---REPRGD 570
Query: 534 EKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNST 593
E + + E+ +E KK D P E + P ++++KNLNF++T
Sbjct: 571 ELLEGDAAPEDVKEIKKSVEDVMDADSKTPSSEATAIDG------PTVSIFVKNLNFSTT 624
Query: 594 EDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLD 653
+ FK V K DPK+ + LSMG+GF++F T+E + + + +D
Sbjct: 625 SAQLAEKFKPFSGFVVAQVKTKPDPKNSDKKLSMGFGFIEFRTKEQAGAVIAAMDGAVID 684
Query: 654 EHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELK 713
H+I+LK S++ +++ + S K+ KI+V+N+PF+A + +V ELF +FG+LK
Sbjct: 685 GHKIQLKISHKQ-----SSLPKTSKGSKKKISGKIIVKNLPFEATRKDVFELFSSFGQLK 739
Query: 714 FVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVED 772
VR+PKK S RGF FVEF+ +EA+ AM L Q HL GRRLV+++AE E+D+VE+
Sbjct: 740 SVRVPKKFDKSA--RGFAFVEFLLPSEAENAMDQL-QGVHLLGRRLVMQYAEQESDDVEE 796
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 323 QEDSVQFAE----DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK 378
QED V E I +GR+F+RN+ Y TE+D +LF YG L EV + +D T ++K
Sbjct: 283 QEDEVSAEEAALTKIRATGRLFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSK 342
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
GFA V F PEHA AY LD +F GR+LH++P K
Sbjct: 343 GFAYVLFKDPEHAANAYIELDKQIFQGRLLHILPADAK 380
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 141/333 (42%), Gaps = 60/333 (18%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKA 274
V +R I+VKN P G +++L F LP + + +A I ++D A
Sbjct: 482 VTERDDRIILVKNFPHGTTREELAELF--LPFGKIERLLMPPSGTIAIIQYRDVPAARGA 539
Query: 275 LNKNKSFWKGKQLNIY--KYSKDN-SAKYSGAADDNNNASMENIKAKHWKSQEDSVQF-- 329
K S+ + K+ +Y K KD S + G +A+ E++K + KS ED +
Sbjct: 540 FTK-LSYKRFKEAILYLEKGPKDCFSREPRGDELLEGDAAPEDVK-EIKKSVEDVMDADS 597
Query: 330 ----AEDIAESG---RIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL------PIDKETDK 376
+E A G IFV+NL+++ T +L EK+ P + ++ P K +DK
Sbjct: 598 KTPSSEATAIDGPTVSIFVKNLNFSTTS---AQLAEKFKPFSGFVVAQVKTKPDPKNSDK 654
Query: 377 --TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISER 433
+ GF + F E A +DG V +DG K+ IS +
Sbjct: 655 KLSMGFGFIEFRTKEQAGAVIAAMDGAV-------------------IDGHKIQLKISHK 695
Query: 434 K--LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGIT 485
+ L ++ + + I+VKNLP+ D+ LF FG L V VP G
Sbjct: 696 QSSLPKTSKGSKKKISGKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGF- 754
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
VEFL ++A+ A + L L +++A
Sbjct: 755 AFVEFLLPSEAENAMDQLQGVHLLGRRLVMQYA 787
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 98/234 (41%), Gaps = 22/234 (9%)
Query: 181 NNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKD 240
+++ D + + ++K +D +D S P S+A +I VKNL
Sbjct: 569 GDELLEGDAAPEDVKEIKKSVEDVMDAD-SKTPSSEATAIDGPTVSIFVKNLNFSTTSAQ 627
Query: 241 LKAYFKPLP---LASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNS 297
L FKP +A V+T D KN +K L+ F + + +
Sbjct: 628 LAEKFKPFSGFVVAQVKTK---------PDPKNSDKKLSMGFGFI---EFRTKEQAGAVI 675
Query: 298 AKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLF 357
A GA D + +K H +S SG+I V+NL + T D+ +LF
Sbjct: 676 AAMDGAVIDGHKI---QLKISHKQSSLPKTSKGSKKKISGKIIVKNLPFEATRKDVFELF 732
Query: 358 EKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+G L V +P K+ DK+ +GFA V FL+P A A L G LGR L +
Sbjct: 733 SSFGQLKSVRVP--KKFDKSARGFAFVEFLLPSEAENAMDQLQGVHLLGRRLVM 784
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKP 102
+TDV++ G RRFAFIGY E A A++YFN +++ ++RI+V + D P
Sbjct: 37 ITDVKIVKDKSGNSRRFAFIGYRSEQDAFDAIEYFNGSFIDTARIEVAMAKSFADPRVP 95
>gi|408388514|gb|EKJ68198.1| hypothetical protein FPSE_11665 [Fusarium pseudograminearum CS3096]
Length = 855
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 192/345 (55%), Gaps = 38/345 (11%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L+AF + R ILVKN PY T +L+ LFE G + RVL+PP G +V+F Q N
Sbjct: 498 LEAFKS--KKRGDTAILVKNFPYGTTIDELRKLFEESGPVLRVLMPPSGTIAIVQFSQPN 555
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
AK+AF +LAY + + L+LE AP +F G ++ + +
Sbjct: 556 YAKSAFGNLAYRRIGDSVLFLEKAPSDIFT--------------------GGDQLGQAVS 595
Query: 555 EEDNQQGVPEVEE-NVEEDEEREPEPD-----TTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
+D Q P V+ +V + R +P+ T+L+++NLNF++T + F+
Sbjct: 596 LKDRQ--APTVQNLSVNDLLSRGDKPEEELETTSLFVRNLNFSTTTSRLAETFQSLDGFV 653
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES 668
S V K DPK PGQ LSMG+GFV+F T+ ALKV+ L++H + +K S++ L
Sbjct: 654 SARVKTKMDPKKPGQTLSMGFGFVEFRTKGQAQAALKVMDGHVLEDHTLAVKASHKGL-- 711
Query: 669 EATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 726
+A +R+ K G +KI+++N+PFQ + ++ LF +G+L+ VRLPKK
Sbjct: 712 DAAEERRREDKAKKSAGQRTKIIIKNLPFQTTKKDIRSLFGTYGQLRSVRLPKK--ADYT 769
Query: 727 HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVE 771
RGF F +F+T EA+ A+ +L + THL GR+LVL++A EAD V+
Sbjct: 770 PRGFAFADFVTPREAENALNSL-RDTHLLGRKLVLDFA-EADAVD 812
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I + R+FVRNL Y+ TEDDL + FE++G + EV LP++K + +KGFAL+ F P
Sbjct: 321 EAIRRTSRLFVRNLPYSATEDDLRERFEQFGTVEEVHLPVNK-SGTSKGFALILFTEPSG 379
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A +A+Q +D F GR++H+IP + +
Sbjct: 380 AVEAFQAMDRATFQGRIIHIIPASARRD 407
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 118/512 (23%), Positives = 202/512 (39%), Gaps = 61/512 (11%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
Y T++ L+ +FE+ GTV +V L G + FA I + A A +
Sbjct: 336 YSATEDDLRERFEQFGTVEEVHLPVNKSGTSKGFALILFTEPSGAVEAFQAMDRATFQGR 395
Query: 87 RIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPT 146
I + S DT + ++ +K + I KQ+ S N T
Sbjct: 396 IIHIIPASARRDT----ALDEFTLSKLPLKKQNMIRKKQE-------------ASTN--T 436
Query: 147 FSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAP 206
F ++ L+ + ++N+ G K E + S + I++ ++ +TKS TA
Sbjct: 437 F-NWNALYMSQDAVNASVANRLGVSKSELLDPTSADAAVKQAIAETSVIQ-ETKSYFTAN 494
Query: 207 SDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGMAYIGF 265
SK KR I+VKN P G +L+ F+ P+ V G I
Sbjct: 495 GVDLEAFKSK----KRGDTAILVKNFPYGTTIDELRKLFEESGPVLRVLMPPSGTIAIVQ 550
Query: 266 KDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSG--------AADDNNNASMENIKA 317
+ N K+ N ++ + ++ K S ++G + D +++N+
Sbjct: 551 FSQPNYAKSAFGNLAYRRIGDSVLF-LEKAPSDIFTGGDQLGQAVSLKDRQAPTVQNLSV 609
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK- 376
S+ D E+ E+ +FVRNL+++ T L + F+ + + K
Sbjct: 610 NDLLSRGDK---PEEELETTSLFVRNLNFSTTTSRLAETFQSLDGFVSARVKTKMDPKKP 666
Query: 377 ----TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISE 432
+ GF V F A A + +DG V L + K + +D
Sbjct: 667 GQTLSMGFGFVEFRTKGQAQAALKVMDGHVLEDHTLAV-----KASHKGLD----AAEER 717
Query: 433 RKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITG 486
R+ D + R+K I++KNLP++T D+++LF +G L V +P P G
Sbjct: 718 RREDKAKKSAGQRTK--IIIKNLPFQTTKKDIRSLFGTYGQLRSVRLPKKADYTPRGF-A 774
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+F+ +A+ A NSL T L L++A
Sbjct: 775 FADFVTPREAENALNSLRDTHLLGRKLVLDFA 806
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S++ VRN+P+ A + ++ E F+ FG ++ V LP + SG +GF + F + A A
Sbjct: 327 SRLFVRNLPYSATEDDLRERFEQFGTVEEVHLP--VNKSGTSKGFALILFTEPSGAVEAF 384
Query: 746 KALCQST 752
+A+ ++T
Sbjct: 385 QAMDRAT 391
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
I++ + F +G +TDV+L RR ++GY + A A+ YFN +Y+ S+
Sbjct: 15 ISEADFRKHFSAQGREITDVKLIPQ-----RRIGYVGYKTSEDASKAVKYFNRSYIRMSK 69
Query: 88 IKVEKCSNLGD 98
I VE + D
Sbjct: 70 IAVETARPISD 80
>gi|303322875|ref|XP_003071429.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111131|gb|EER29284.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 813
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 193/348 (55%), Gaps = 37/348 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F Q R ILVKN + DLK LF+P+G + R+L+PP G +VEF +
Sbjct: 462 LDSFKQ--RERGNTAILVKNFSFGVKAEDLKKLFDPYGQIMRLLMPPSGTIAIVEFSMPD 519
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+ + AF LAY K + L+LE AP+G+F E K
Sbjct: 520 ECQKAFRGLAYRKLGDSILFLEKAPKGLF-----------------------EGKPTTHI 556
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPD---TTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
Q+ V E + EPE + +TLY++NLNF++T S+ FK S
Sbjct: 557 AVQPQKAVAPAFSTSETFKAGEPENEVESSTLYVRNLNFSTTTASLMDVFKPLDGFLSAQ 616
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
V K DPK+PG+ LSMG+GFV+F TR AL + LD+H++ ++ S++ +S
Sbjct: 617 VKTKPDPKNPGERLSMGFGFVEFRTRAQAQAALAAMNGYKLDQHELVIRPSHKATDSAEQ 676
Query: 672 TVKRKSS--NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
++ ++ N A++T KI+++N+PFQA + +V+ LF A+G+L+ VR+PKK + RG
Sbjct: 677 QRRQDAAKKNAARRT--KIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPKKFDRTA--RG 732
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE--ADNVEDIRK 775
F F +F++ EA+ AM AL ++THL GR+LVLE+ E D E+I+K
Sbjct: 733 FAFADFVSACEAENAMDAL-RNTHLLGRKLVLEFVSEEAVDPEEEIQK 779
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 176/420 (41%), Gaps = 97/420 (23%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ + L++ F + VTD + RR F+G+ + AQ A++YFN T++ S+I
Sbjct: 15 LNNDALRSHFASRFEVTDAHVIPK-----RRIGFVGFKDHNSAQNAVNYFNKTFIRMSKI 69
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSK------ 142
VE KP AP+ ++ K N +P+ + SK G +
Sbjct: 70 AVELA-------KP---VDAAPEVNSRSKARNSSPR-----DADTSSKSGSLKRKRGLEE 114
Query: 143 NDPTFSDFLQLH------------GKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADIS 190
+DP +FL G D++ LP N+D + E +E
Sbjct: 115 DDPKLQEFLNTMQAPTKTKTWADTGTDLTTSLPFHNEDSKNAEIPDE------------- 161
Query: 191 DMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDL----KAYFK 246
M ++K A +P +P S + ++L G++ ++L +A +
Sbjct: 162 -MPTKRVK------AALEPDLPEES----------SKTSQSLSTGLRNRELNNDAQATAE 204
Query: 247 PLP---------LASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNS 297
P L S + LG+ DE++ + + + + I +
Sbjct: 205 PTESAPQSDADWLRSRTSRLLGL----LDDEEDAGRPVAETTNASPPVSHRIQHEPTTDH 260
Query: 298 AKYSGAADDNNNA-SMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKL 356
+ S +DN+ A S + I A +V+ I E+GR+F+RNL Y TE+DL
Sbjct: 261 SDVSAEKEDNDPAGSTDAIDA--------NVKL---IRETGRLFIRNLPYDTTEEDLQSE 309
Query: 357 FEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
F ++G L E+ + D +KGFA F P+ A +AY+ LDG F GR++H++P K
Sbjct: 310 FARFGKLEELHIAFDSRHSTSKGFAYAQFFDPDSAIEAYKQLDGKDFQGRLMHVLPASSK 369
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 130/338 (38%), Gaps = 80/338 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N S+ V +DL KLF+ YG + +++P + A+V F MP+ +A++ L
Sbjct: 475 ILVKNFSFGVKAEDLKKLFDPYGQIMRLLMP------PSGTIAIVEFSMPDECQKAFRGL 528
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGK--VHCCISERK--LDAFNQVVEARS-------- 446
LG + + PK G +GK H + +K AF+ ++
Sbjct: 529 -AYRKLGDSILFLEKAPK---GLFEGKPTTHIAVQPQKAVAPAFSTSETFKAGEPENEVE 584
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPP----------YGITGLVEFLQKN 494
+ V+NL + T L +F+P +V P G G VEF +
Sbjct: 585 SSTLYVRNLNFSTTTASLMDVFKPLDGFLSAQVKTKPDPKNPGERLSMGF-GFVEFRTRA 643
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
QA+AA ++ K + L + + K + E + ++ K+N A
Sbjct: 644 QAQAALAAMNGYKLDQHELVI---------------RPSHKATDSAEQQRRQDAAKKNAA 688
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
T + IKNL F +T+ ++ F G + SV V +
Sbjct: 689 RR------------------------TKIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPK 724
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
K D + G+ F F + A+ L+N+ L
Sbjct: 725 KFD------RTARGFAFADFVSACEAENAMDALRNTHL 756
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHAT 392
A +I ++NL + T+ D+ LF YG L V +P K+ D+T +GFA F+ A
Sbjct: 688 ARRTKIIIKNLPFQATKKDVQSLFGAYGQLRSVRVP--KKFDRTARGFAFADFVSACEAE 745
Query: 393 QAYQHLDGTVFLGRMLHL 410
A L T LGR L L
Sbjct: 746 NAMDALRNTHLLGRKLVL 763
>gi|85116206|ref|XP_965014.1| hypothetical protein NCU02611 [Neurospora crassa OR74A]
gi|74696746|sp|Q7SG09.1|MRD1_NEUCR RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|28926814|gb|EAA35778.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 827
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 177/328 (53%), Gaps = 34/328 (10%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R ILVKN+ T+ +L+ LFE G + RVL+PP G +V+F Q Q + AF A
Sbjct: 486 RGDTTILVKNIKNTTI-EELRTLFEEHGTVLRVLMPPSGTIAIVQFAQPVQCRTAFARKA 544
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQ--GV 562
Y++FK+ L+LE P+G+F + N A + + GV
Sbjct: 545 YSRFKDSVLFLEKGPKGLFTD--------------------------NVAVPTDARPAGV 578
Query: 563 --PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
P V + +E D+ E ++L+++NLNF++T + FK V K DPK
Sbjct: 579 QKPSVADLLERDDAEEQLETSSLFVRNLNFSTTSQGLTDAFKHLDGFVQAKVKTKTDPKK 638
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNV 680
PGQ LSMG+GFV F T++ ALKV+ LD H+I +K S+R L++ + +
Sbjct: 639 PGQVLSMGFGFVAFRTKDQAQAALKVMDGQVLDAHKISVKASHRGLDAAEERRREDMAKK 698
Query: 681 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 740
A G+K++V+N+PF+ + EV LF A+G+L +R+PKK S RGF F EF T E
Sbjct: 699 AANQGTKLVVKNLPFEVTKKEVRTLFSAYGKLVALRIPKKFNQSS--RGFAFAEFSTAKE 756
Query: 741 AKRAMKALCQSTHLYGRRLVLEWAEEAD 768
A A +L + TH+ GRRLV+++A+ D
Sbjct: 757 ALNAFNSL-KDTHILGRRLVIDFAQAED 783
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 176/424 (41%), Gaps = 90/424 (21%)
Query: 29 ITQEQLKAKFEEKG-TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT+ + + F +G VTDV+L R F+GY + A A+ YFN +++ SR
Sbjct: 16 ITEAEFRKHFSAEGRQVTDVKLIPA-----RHIGFVGYKSAEDAARAVKYFNRSFIRMSR 70
Query: 88 IKVEKCSNLGDT--------------TKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTK 133
I V+ + D+ PK+ K P ++ PK + P+ K
Sbjct: 71 ISVDIAKPIADSKPQHKSPSKGSSKDADPKNAPKVLPPNTKVTAA--AVPKVEAAPDAPK 128
Query: 134 DSKPGKKSKNDPTFSDFLQLHGKDVSK------------------LLPLSNKDGEEKEEE 175
K + DP ++L + G SK +P +DGE ++E
Sbjct: 129 -RKLDVLDEADPKLQEYLDVMGAHPSKKMRNAEGLPTTVDEVLAPAVPAGLEDGES-DDE 186
Query: 176 NEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAG 235
ED + + +D E + AP S P AP P
Sbjct: 187 YEDIPSRTHNQSHTADQEMVD--------APLAASAEPSESAP--------------PVS 224
Query: 236 VKKKD---LKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKY 292
+ D L++ RT L + D ++ AL S +++
Sbjct: 225 LDATDDDWLRS----------RTNRL----LDLVDPEDAAFALRPAAS--GSAAVSVPST 268
Query: 293 SKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
S +N+A S +++ + A E ++ E ++ R+F+RNLSYTVTEDD
Sbjct: 269 SVENTA--SAKPEEHPAEDSREMAATSTHDPESAISLIE---KTSRLFLRNLSYTVTEDD 323
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
+ + F K+G L EV +P+D + +KGFA++ + P A A+Q DGTVF GR++H++P
Sbjct: 324 VREHFAKFGILVEVHVPLDSK-GHSKGFAMIRYEKPASALAAFQ-TDGTVFQGRIVHILP 381
Query: 413 GKPK 416
K
Sbjct: 382 AAAK 385
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-------GFAL 382
AE+ E+ +FVRNL+++ T LT F+ + + +TD K GF
Sbjct: 592 AEEQLETSSLFVRNLNFSTTSQGLTDAFKHLDGFVQA--KVKTKTDPKKPGQVLSMGFGF 649
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
V F + A A + +DG V + + K + +D R+ D +
Sbjct: 650 VAFRTKDQAQAALKVMDGQVLDAHKISV-----KASHRGLD----AAEERRREDMAKKAA 700
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQA 496
+K ++VKNLP+ +++ LF +G L + +P G EF +A
Sbjct: 701 NQGTK--LVVKNLPFEVTKKEVRTLFSAYGKLVALRIPKKFNQSSRGF-AFAEFSTAKEA 757
Query: 497 KAAFNSLAYTKFKEVPLYLEWA------PEGVFAEAKEKSKGK 533
AFNSL T L +++A PE A ++K++ +
Sbjct: 758 LNAFNSLKDTHILGRRLVIDFAQAEDIDPEDQIAAMEKKTRAQ 800
>gi|261188230|ref|XP_002620531.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239593278|gb|EEQ75859.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239609317|gb|EEQ86304.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ER-3]
gi|327354414|gb|EGE83271.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ATCC
18188]
Length = 825
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/334 (35%), Positives = 183/334 (54%), Gaps = 25/334 (7%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F + R ILVKN + DL+ LFEPFG + R+L+PP G +VEF+ +
Sbjct: 469 LDSFKK--RERGNTAILVKNFSFGVKADDLRQLFEPFGQIKRLLMPPSGTIAIVEFVMAD 526
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+ + AF LAY K + L+LE AP+ +F +E
Sbjct: 527 ECQKAFKGLAYRKLGDSILFLERAPKDLF----------------DENATATRVIAPPPK 570
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
++ + E +E P +TL+++NLNF++T + F+ S V
Sbjct: 571 VISQTYSTSDIFKATETEEAESPLETSTLFVRNLNFSTTNARLTEVFQPLDGFLSARVKT 630
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PG+ LSMG+GFV+F + AL +Q LD+H++ +K S++ ++ A +
Sbjct: 631 KTDPKRPGETLSMGFGFVEFRSSAQARAALAAMQGYKLDQHELVIKASHKAVD--AAEER 688
Query: 675 RKSSNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
R+ N K G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K G+ RGF F
Sbjct: 689 RRQDNAKKLAMRGTKILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDGTA--RGFAF 746
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
+F++ EA+ AM AL ++THL GRRLVL++A E
Sbjct: 747 ADFVSAREAENAMDAL-KNTHLLGRRLVLDFASE 779
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ E+GR+FVRNL Y +E DL LF +G + EV + D K+KGFA V + PE A
Sbjct: 293 LRETGRLFVRNLLYNASESDLESLFSPFGKIDEVHVAFDTRHSKSKGFAYVQYADPEAAI 352
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPK 416
QA++ LDG VF GR+LH++P K
Sbjct: 353 QAFKTLDGKVFQGRLLHILPASSK 376
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 156/385 (40%), Gaps = 92/385 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N S+ V DDL +LFE +G + +++P + A+V F+M + +A++ L
Sbjct: 482 ILVKNFSFGVKADDLRQLFEPFGQIKRLLMP------PSGTIAIVEFVMADECQKAFKGL 535
Query: 399 ------DGTVFLGRMLHLIPGKPKE--NEGNVDGKVHC----CISE--RKLDAF--NQVV 442
D +FL R PK+ +E +V IS+ D F +
Sbjct: 536 AYRKLGDSILFLERA-------PKDLFDENATATRVIAPPPKVISQTYSTSDIFKATETE 588
Query: 443 EARS---KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV--------PPYGIT---GLV 488
EA S + V+NL + T L +F+P V P ++ G V
Sbjct: 589 EAESPLETSTLFVRNLNFSTTNARLTEVFQPLDGFLSARVKTKTDPKRPGETLSMGFGFV 648
Query: 489 EFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEE 548
EF QA+AA ++ K + L ++ + + V A EE
Sbjct: 649 EFRSSAQARAALAAMQGYKLDQHELVIKASHKAVDA--------------------AEER 688
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
++++ A++ +G T + IKNL F +T+ IR F G +
Sbjct: 689 RRQDNAKKLAMRG-------------------TKILIKNLPFQATKKDIRNLFSAYGKLR 729
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES 668
SV V +K D + G+ F F + A+ L+N+ L ++ L ++
Sbjct: 730 SVRVPQKFDG------TARGFAFADFVSAREAENAMDALKNTHLLGRRLVLDFASE---- 779
Query: 669 EATTVKRKSSNVAKQTGSKILVRNI 693
EA +++ N+ K+ +++ + N+
Sbjct: 780 EAIDPEKEIQNIEKKMDAQVNLVNL 804
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 134/333 (40%), Gaps = 44/333 (13%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKAL 275
+R I+VKN GVK DL+ F+P ++ + +A + F C KA
Sbjct: 475 RERGNTAILVKNFSFGVKADDLRQLFEPF--GQIKRLLMPPSGTIAIVEFVMADECQKAF 532
Query: 276 NKNKSFWK--GKQLNIYKYSKD----NSAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
K ++ K L + + KD N+ A S + +K+ E +
Sbjct: 533 -KGLAYRKLGDSILFLERAPKDLFDENATATRVIAPPPKVISQTYSTSDIFKATE--TEE 589
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP-IDKETDKTK-------GFA 381
AE E+ +FVRNL+++ T LT++F+ PL + + +TD + GF
Sbjct: 590 AESPLETSTLFVRNLNFSTTNARLTEVFQ---PLDGFLSARVKTKTDPKRPGETLSMGFG 646
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQV 441
V F A A + G L + K + VD R+ D ++
Sbjct: 647 FVEFRSSAQARAALAAMQGYKLDQHELVI-----KASHKAVD----AAEERRRQDNAKKL 697
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQ 495
+K IL+KNLP++ D++ LF +G L V VP G +F+ +
Sbjct: 698 AMRGTK--ILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDGTARGF-AFADFVSARE 754
Query: 496 AKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKE 528
A+ A ++L T L L++A E KE
Sbjct: 755 AENAMDALKNTHLLGRRLVLDFASEEAIDPEKE 787
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ + L+ F + VTD + RR F+G+ AQ A +YFN TY+ S+I
Sbjct: 16 FSNDDLRKHFSTRYQVTDAHVIPK-----RRIGFVGFKTPTLAQDAANYFNKTYIRMSKI 70
Query: 89 KVEKCSNL-GDTT---KPKSWSKYAPDSSAYQKLHN-IAPKQDLK-PEHTKDSKPGKKSK 142
VE + GD+ KP S + +S+ ++ H+ + KQD K E+ +P KSK
Sbjct: 71 AVEMARPVDGDSPVSGKPNSRHATSANSTTLKRKHDQVEQKQDPKLQEYLAAMQPAMKSK 130
>gi|340924295|gb|EGS19198.1| multiple RNA-binding domain-containing protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 832
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/331 (37%), Positives = 185/331 (55%), Gaps = 33/331 (9%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R +ILVKN+ T +L+ LF G + RVL+PP G +V+F Q +AAF A
Sbjct: 488 RGDTVILVKNI-KNTTAEELRDLFAEHGSVLRVLMPPSGTIAIVQFAQPAACRAAFAKKA 546
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y++FK+ L+LE P+G+F + +G N+ G Q +
Sbjct: 547 YSRFKDSVLFLEKGPKGLFTDTPPLQQG-----NQTTG----------------VQKLSA 585
Query: 565 VEENVEEDEEREPEPDTT-LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E +D E E +T+ LY++NLNF++T + + FK S TV K DPK PGQ
Sbjct: 586 AELLARDDAEEESTVETSSLYVRNLNFSTTSEGLANAFKHLDGFVSATVKTKPDPKKPGQ 645
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
LSMG+GF F T+E ALK + + LD +++ +K S+R L++ +R+ ++AK+
Sbjct: 646 VLSMGFGFCVFRTKEQAQAALKAMDGTVLDGYKLVIKASHRGLDAAE---ERRREDLAKK 702
Query: 684 TG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 740
KI+++N+PFQA + ++ +LF +G+L VR+PKK + RGF F EF T E
Sbjct: 703 AAVVKRKIVIKNLPFQATKKDIRDLFGTYGKLVAVRVPKKF--NSQSRGFAFAEFATAKE 760
Query: 741 AKRAMKALCQSTHLYGRRLVLEWAEEADNVE 771
A A+ AL + THL GRRLVL++A EAD V+
Sbjct: 761 ALNALTAL-KDTHLLGRRLVLDFA-EADEVD 789
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 76/112 (67%), Gaps = 5/112 (4%)
Query: 305 DDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLA 364
D +AS+++ A+ S ED++ I ++ R+F+RNLSYT TEDDL + F ++G L
Sbjct: 281 DKAGDASVKDKAAEQHGSMEDAIA---TINKTRRLFLRNLSYTTTEDDLREHFSRFGALE 337
Query: 365 EVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
EV LP+D + +++KGFA++ F PE A A+Q LDG+ F GR+LH++P PK
Sbjct: 338 EVNLPLDNQ-NRSKGFAMIRFEKPEAAVAAFQ-LDGSTFQGRLLHILPAAPK 387
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 32/184 (17%)
Query: 29 ITQEQLKAKFEEKG-TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT+ + F +G VTDV+L Y + RR FIGY + A A+ YFN T++ SR
Sbjct: 15 ITESDFRKHFAVQGRQVTDVKL-YPS----RRIGFIGYKSAEDAAWAVKYFNKTFIRLSR 69
Query: 88 IKVEKCSNLGDTTKPKSWSKYAP-DSSAYQKLHNIAPKQDLKPEHTKDSKPGKK----SK 142
I V+ + D+ PK+ +K P + SA LHN AP + +SK K+ +
Sbjct: 70 IAVDLAKPIADSI-PKNGAKLTPANGSARISLHN-APASGIGQAEDGNSKKRKREEPAEE 127
Query: 143 NDPTFSDFLQLHGKDVSKLL------------PLSNKDGEEKEEENED-------ESNNQ 183
DP +FL++ G KL P++ G E ++E +D +S+N
Sbjct: 128 ADPKLREFLEVMGHTSKKLRDQDVPSAEPQSEPVATVAGGESDDEYDDVAVRKKSQSDNT 187
Query: 184 IAHA 187
+ H+
Sbjct: 188 VGHS 191
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 118/293 (40%), Gaps = 27/293 (9%)
Query: 260 MAYIGFKDEKNCNKALNKNK-SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
+A + F C A K S +K L + K K N ++ + A
Sbjct: 527 IAIVQFAQPAACRAAFAKKAYSRFKDSVLFLEKGPKGLFTDTPPLQQGNQTTGVQKLSAA 586
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-- 376
+++D+ + E E+ ++VRNL+++ T + L F+ + + K
Sbjct: 587 ELLARDDAEE--ESTVETSSLYVRNLNFSTTSEGLANAFKHLDGFVSATVKTKPDPKKPG 644
Query: 377 ---TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISER 433
+ GF F E A A + +DGTV G L + K + +D ER
Sbjct: 645 QVLSMGFGFCVFRTKEQAQAALKAMDGTVLDGYKLVI-----KASHRGLD-----AAEER 694
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGL 487
+ + + A KR I++KNLP++ D++ LF +G L V VP G
Sbjct: 695 RREDLAKKA-AVVKRKIVIKNLPFQATKKDIRDLFGTYGKLVAVRVPKKFNSQSRGF-AF 752
Query: 488 VEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
EF +A A +L T L L++A E + +E+ K EK+ ++
Sbjct: 753 AEFATAKEALNALTALKDTHLLGRRLVLDFA-EADEVDPEEQIKAMEKKTRDQ 804
>gi|322712046|gb|EFZ03619.1| MRD1-like protein [Metarhizium anisopliae ARSEF 23]
Length = 841
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 179/331 (54%), Gaps = 27/331 (8%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF + R ILVKN P+ T +L+ +FE G + RVL+PP G +V+F Q N
Sbjct: 486 LDAFKS--QRRGDTTILVKNFPFGTTMEELRKMFEEHGQVLRVLMPPTGTIAIVQFAQAN 543
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
AKAAF LAY + K+ L+LE AP+ + G+ ++ + A
Sbjct: 544 HAKAAFGKLAYRRIKDSVLFLEKAPKDLL--------------------RGDISEQTSRA 583
Query: 555 EEDNQQGVPE--VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
+ GV + V + + ++ E T+L+I+NLNF +T + F+ S V
Sbjct: 584 TDQQATGVRKFTVSDLLSSGDKAEEVETTSLFIRNLNFATTTSRLAEAFESLDGFVSARV 643
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
K DPK PGQ LSMG+GF +F ++ ALK + LD H + +K S++ ++
Sbjct: 644 KTKMDPKKPGQTLSMGFGFAEFRSKTQAQAALKAMDGHVLDGHTLGVKASHKGQDAAEER 703
Query: 673 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
+ + A +KI+++N+PFQA + +V LF +G+L+ VR+PKK + RGF F
Sbjct: 704 RREDRAKKAAAQRTKIVIKNLPFQATKKDVRSLFGTYGQLRSVRVPKKADFTA--RGFAF 761
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
+F+T EA+ A+ AL + THL GRRLVL++
Sbjct: 762 ADFVTPREAENALNAL-KDTHLLGRRLVLDF 791
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 176/418 (42%), Gaps = 61/418 (14%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT+ + + F +TDV+L RR ++GY A A+ YFN +Y+ SR
Sbjct: 15 ITEAEFRKHFSAGNREITDVKLIPQ-----RRIGYVGYKSAHDAAGAVKYFNRSYIRMSR 69
Query: 88 IKVEKCSNLGDTTKPKSWSKY----APDSSAYQKLHNIAPKQDLKPE-HTKDSKPGKKSK 142
I VE + D K S AP+ + AP+ + +TK K ++
Sbjct: 70 ISVETARPISDLASRKGHSGSCNLGAPED-------HTAPRSASDHDVNTKKRKREEQET 122
Query: 143 NDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENED-ESNNQIAHADI------SDMEYL 195
DP +FLQ+ S ++G ++ N +++ +H ++ SD EY
Sbjct: 123 ADPRLREFLQVM---------RSGREGAVADDSNAAVGADHAFSHGEVAVPEGESDDEYE 173
Query: 196 KLKT---KSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS 252
++ + KS+ P V++ P R T AG K +
Sbjct: 174 QIPSRTEKSRRIEPRQDKSDNVARQP-PPRDERTPKDNIKEAGENKAEA---------ID 223
Query: 253 VRTTFLGMAYIGFKDEKNCNKALNKNKSF------WKGKQLN----IYKYSKDNSAKYSG 302
T G + G D+ N+ G LN + +N S
Sbjct: 224 SEMTDQGPSATGATDDDWLRSRTNRLLDLVDPDDLASGAVLNPVDATTEQDMENDRLSSH 283
Query: 303 AADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGP 362
++D+ + ++ + ED+V I+ + R+FVRNL Y+ TEDD+ + F+K+G
Sbjct: 284 SSDEVTPGTTTDVATSKETATEDAVSA---ISRTSRLFVRNLPYSATEDDIRETFDKFGT 340
Query: 363 LAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
L EV LP+ TKGFA+V F A +A+Q LDG F GR+LH+IP K +G
Sbjct: 341 LQEVHLPL-TAAGATKGFAMVLFTNSSDAVRAFQALDGVTFQGRILHIIPADAKREQG 397
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 129/340 (37%), Gaps = 82/340 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N + T ++L K+FE++G + V++P T A+V F HA A+ L
Sbjct: 499 ILVKNFPFGTTMEELRKMFEEHGQVLRVLMP------PTGTIAIVQFAQANHAKAAFGKL 552
Query: 399 ------DGTVFLGRM-LHLIPGKPKENEGNVDGKVHCCISERKLDAFNQV--------VE 443
D +FL + L+ G E + + RK + + VE
Sbjct: 553 AYRRIKDSVLFLEKAPKDLLRGDISEQTSRATDQQATGV--RKFTVSDLLSSGDKAEEVE 610
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV--------PPYGIT---GLVEFLQ 492
S + ++NL + T + L FE V P ++ G EF
Sbjct: 611 TTS---LFIRNLNFATTTSRLAEAFESLDGFVSARVKTKMDPKKPGQTLSMGFGFAEFRS 667
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
K QA+AA ++ L+ GV K KG++ EE ++E+
Sbjct: 668 KTQAQAALKAMDGH-------VLDGHTLGV----KASHKGQDA---------AEERRRED 707
Query: 553 TAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
A++ Q T + IKNL F +T+ +R F G + SV V
Sbjct: 708 RAKKAAAQ-------------------RTKIVIKNLPFQATKKDVRSLFGTYGQLRSVRV 748
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+K D F + G+ F F T AL L+++ L
Sbjct: 749 PKKAD------FTARGFAFADFVTPREAENALNALKDTHL 782
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 124/315 (39%), Gaps = 32/315 (10%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKP--LPLASVRTTFLGMAYIGFKDEKNCNKALNK 277
+R TI+VKN P G ++L+ F+ L + +A + F + A K
Sbjct: 492 QRRGDTTILVKNFPFGTTMEELRKMFEEHGQVLRVLMPPTGTIAIVQFAQANHAKAAFGK 551
Query: 278 -NKSFWKGKQLNIYKYSKD----NSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
K L + K KD + ++ + A D + S D AE+
Sbjct: 552 LAYRRIKDSVLFLEKAPKDLLRGDISEQTSRATDQQATGVRKFTVSDLLSSGDK---AEE 608
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLM 387
+ E+ +F+RNL++ T L + FE + + K + GF F
Sbjct: 609 V-ETTSLFIRNLNFATTTSRLAEAFESLDGFVSARVKTKMDPKKPGQTLSMGFGFAEFRS 667
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSK 447
A A + +DG V G L G ++G R+ D + R+K
Sbjct: 668 KTQAQAALKAMDGHVLDGHTL----GVKASHKGQ-----DAAEERRREDRAKKAAAQRTK 718
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP---PYGITG--LVEFLQKNQAKAAFNS 502
I++KNLP++ D+++LF +G L V VP + G +F+ +A+ A N+
Sbjct: 719 --IVIKNLPFQATKKDVRSLFGTYGQLRSVRVPKKADFTARGFAFADFVTPREAENALNA 776
Query: 503 LAYTKFKEVPLYLEW 517
L T L L++
Sbjct: 777 LKDTHLLGRRLVLDF 791
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S++ VRN+P+ A + ++ E F FG L+ V LP + +G +GF V F ++A RA
Sbjct: 315 SRLFVRNLPYSATEDDIRETFDKFGTLQEVHLP--LTAAGATKGFAMVLFTNSSDAVRAF 372
Query: 746 KAL 748
+AL
Sbjct: 373 QAL 375
>gi|448521115|ref|XP_003868429.1| hypothetical protein CORT_0C01480 [Candida orthopsilosis Co 90-125]
gi|380352769|emb|CCG25525.1| hypothetical protein CORT_0C01480 [Candida orthopsilosis]
Length = 819
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 199/372 (53%), Gaps = 31/372 (8%)
Query: 419 EGNVDGKVHCCISERKLD--AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGR 476
E +V G V ER +D +FN+ + + ++ILVKN + T +L LF +G L R
Sbjct: 448 EAHVIGDVRKFFEERGVDLASFNK--KEKDDKVILVKNFSFGTTVEELGELFSQYGKLKR 505
Query: 477 VLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKE 536
+++PP G ++EF A+AAF LAY +F LYLE P+ +F +E
Sbjct: 506 IIMPPSGTIAIIEFNDAPSARAAFTKLAYKRFGSSILYLEKGPKDLFT----------RE 555
Query: 537 KNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDS 596
E E E E +K A + ++ E +EE P ++++KNLNF++T
Sbjct: 556 PVENENVELSEPEKVVEA----KVSASDILGEPEVEEEEIEGPTVSVFVKNLNFSTTVQQ 611
Query: 597 IRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQ 656
+ FK TV K DPK G+ LSMG+GFV+F + N A+ L LD H+
Sbjct: 612 LSNLFKSLPGFVLATVKTKPDPKDAGKILSMGFGFVEFKSLAQANAAIATLDGHVLDGHK 671
Query: 657 IELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVR 716
++LK S++ + + T KS+ SKI+++N+PF+A + ++ ELF AFG+LK VR
Sbjct: 672 LQLKISHKQGTATSATAPSKSAKT-----SKIIIKNLPFEASRKDLLELFGAFGQLKSVR 726
Query: 717 LPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD-----NVE 771
+PKK S RGF FVEF EA+ AMK L + HL GRRLV+++AE+ +E
Sbjct: 727 VPKKFDQSA--RGFAFVEFNLLKEAEDAMKQL-EGVHLLGRRLVMQYAEQDSEDAEAEIE 783
Query: 772 DIRKRTNRYFGT 783
+ K+ R GT
Sbjct: 784 RMTKKVKRQVGT 795
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query: 321 KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGF 380
KS+ED ++ + I E+GR+F+RN+SY TEDD LFE YGPL EV + +D T+K+KGF
Sbjct: 280 KSEEDKIR--DRIEETGRLFIRNISYDATEDDFRHLFESYGPLEEVHIAVDTRTNKSKGF 337
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
+ F+ E A A++ LD +F GR+LH++ K++
Sbjct: 338 VYIQFVNTEDAVNAFESLDKQIFQGRLLHILAADKKKS 375
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E LK F ++G VTDV+L + G+ RRFAFIGY ++ A+ A+ +FN +++ +SRI
Sbjct: 14 TEENLKKHFSQQGDVTDVKLVKSKNGESRRFAFIGYKSDESAEKAVKFFNKSFIDTSRID 73
Query: 90 VEKCSNLGDTTKPKSW 105
V+ + D P S+
Sbjct: 74 VQLAKSFSDPDVPLSF 89
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 41/199 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
++ VKNL + L FK LP LA+V+T +G ++ FK N
Sbjct: 597 SVFVKNLNFSTTVQQLSNLFKSLPGFVLATVKTKPDPKDAGKILSMGFGFVEFKSLAQAN 656
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
A+ + G L+ +K +K H + S
Sbjct: 657 AAI----ATLDGHVLDGHKL---------------------QLKISHKQGTATSATAPSK 691
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
A++ +I ++NL + + DL +LF +G L V +P K+ D++ +GFA V F + + A
Sbjct: 692 SAKTSKIIIKNLPFEASRKDLLELFGAFGQLKSVRVP--KKFDQSARGFAFVEFNLLKEA 749
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A + L+G LGR L +
Sbjct: 750 EDAMKQLEGVHLLGRRLVM 768
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKETDKTKGFALVTFLMPEHATQ 393
+FV+NL+++ T L+ LF+ + P D + GF V F A
Sbjct: 598 VFVKNLNFSTTVQQLSNLFKSLPGFVLATVKTKPDPKDAGKILSMGFGFVEFKSLAQANA 657
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI--IL 451
A LDG V G L L IS ++ A + ++S + I+
Sbjct: 658 AIATLDGHVLDGHKLQL------------------KISHKQGTATSATAPSKSAKTSKII 699
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVP 480
+KNLP+ DL LF FG L V VP
Sbjct: 700 IKNLPFEASRKDLLELFGAFGQLKSVRVP 728
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 540 EEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDT-TLYIKNLNFNSTEDSIR 598
E+GE E + T ++ P VE EED+ R+ +T L+I+N+++++TED R
Sbjct: 252 EDGEFPENVSENQTTTQEEHPVSPVVEHKSEEDKIRDRIEETGRLFIRNISYDATEDDFR 311
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVL 647
F+ GP+ V +A D ++ S G+ ++QF E A + L
Sbjct: 312 HLFESYGPLEEVHIAV--DTRTNK---SKGFVYIQFVNTEDAVNAFESL 355
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 39/194 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N S+ T ++L +LF +YG L +I+P + A++ F A A+ L
Sbjct: 479 ILVKNFSFGTTVEELGELFSQYGKLKRIIMP------PSGTIAIIEFNDAPSARAAFTKL 532
Query: 399 DGTVFLGRMLHLIPG-------KPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-- 449
F +L+L G +P ENE NV+ + E K+ A + + E +
Sbjct: 533 AYKRFGSSILYLEKGPKDLFTREPVENE-NVELSEPEKVVEAKVSASDILGEPEVEEEEI 591
Query: 450 ------ILVKNLPYRTLPTDLKALFEPF--------------GDLGRVLVPPYGITGLVE 489
+ VKNL + T L LF+ D G++L + G VE
Sbjct: 592 EGPTVSVFVKNLNFSTTVQQLSNLFKSLPGFVLATVKTKPDPKDAGKILSMGF---GFVE 648
Query: 490 FLQKNQAKAAFNSL 503
F QA AA +L
Sbjct: 649 FKSLAQANAAIATL 662
>gi|189197515|ref|XP_001935095.1| multiple RNA-binding domain containing protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981043|gb|EDU47669.1| multiple RNA-binding domain containing protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 825
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 186/338 (55%), Gaps = 29/338 (8%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L+AF + A+ ILVKN+P+ P +L+ LFE G + + L+PP G+T +VEF
Sbjct: 476 LEAFQR--SAKGDLAILVKNVPHTVTPDELRKLFEEHGTVTKFLMPPTGMTAIVEFSNVA 533
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
QAK AF SL+Y K K+ LYLE AP+ +F +EG T
Sbjct: 534 QAKTAFMSLSYRKMKDSILYLEKAPKDLF-------------------KEGIATNFVQTT 574
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ P + + + E E TLY++NLNF++T + + FK S TV
Sbjct: 575 FSEQPVVKPTATDLLVDAPEPEATNTATLYVRNLNFSTTTERLTEAFKPLSGFRSATVKT 634
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK LSMG+GFV+F E+ AL+ + L+ H++ +K S++ ++A +
Sbjct: 635 KMDPKR--GVLSMGFGFVEFNNPETATAALRAMDGHDLEGHKLLIKASHKG--ADAAEER 690
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
R K +KI+++N+PF+A + +V LF +G+L+ VR+PKK S RGFGF E
Sbjct: 691 RNEDAAKKAASTKIIIKNLPFEASKKDVRALFTPYGQLRSVRVPKKFDASS--RGFGFAE 748
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVE 771
F TK +A AM AL ++THL GRRLVL +AE E+D+ E
Sbjct: 749 FTTKRDAVNAMNAL-KNTHLLGRRLVLAFAEAESDDPE 785
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I E+GR+++RNL Y ED++ K L EV +P+ K K KGFA V F P A
Sbjct: 300 IRETGRLYLRNLHYGEPEDEIRAAIFKACTLEEVHVPLKKADGKGKGFAFVQFANPSDAV 359
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN 418
+AY D T+F GR+LH+I K K++
Sbjct: 360 EAYLDNDNTIFQGRLLHIISAKAKKD 385
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 131/333 (39%), Gaps = 73/333 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N+ +TVT D+L KLFE++G + + ++P T A+V F A A+ L
Sbjct: 489 ILVKNVPHTVTPDELRKLFEEHGTVTKFLMP------PTGMTAIVEFSNVAQAKTAFMSL 542
Query: 399 DGTVFLGRMLHLIPGKPKE--NEGNVDGKVHCCISER---KLDAFNQVV-----EARSKR 448
+L+L PK+ EG V SE+ K A + +V EA +
Sbjct: 543 SYRKMKDSILYL-EKAPKDLFKEGIATNFVQTTFSEQPVVKPTATDLLVDAPEPEATNTA 601
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGIT----GLVEFLQKNQAKAA 499
+ V+NL + T L F+P V P G+ G VEF A AA
Sbjct: 602 TLYVRNLNFSTTTERLTEAFKPLSGFRSATVKTKMDPKRGVLSMGFGFVEFNNPETATAA 661
Query: 500 FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQ 559
++ + L ++ + +G + EE + E+ A++
Sbjct: 662 LRAMDGHDLEGHKLLIKASHKG--------------------ADAAEERRNEDAAKKAAS 701
Query: 560 QGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
T + IKNL F +++ +R F G + SV V +K D
Sbjct: 702 ---------------------TKIIIKNLPFEASKKDVRALFTPYGQLRSVRVPKKFDAS 740
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
S G+GF +F T+ A+ L+N+ L
Sbjct: 741 ------SRGFGFAEFTTKRDAVNAMNALKNTHL 767
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 92/214 (42%), Gaps = 29/214 (13%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPID-KETDKTKGFALVTFLMPEHAT 392
+ ++VRNL+++ T + LT+ F+ A V +D K + GF V F PE AT
Sbjct: 600 TATLYVRNLNFSTTTERLTEAFKPLSGFRSATVKTKMDPKRGVLSMGFGFVEFNNPETAT 659
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
A + +DG G L + K + D R DA + + I++
Sbjct: 660 AALRAMDGHDLEGHKLLI-----KASHKGAD----AAEERRNEDAAKKAASTK----III 706
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAYT 506
KNLP+ D++ALF P+G L V VP G G EF K A A N+L T
Sbjct: 707 KNLPFEASKKDVRALFTPYGQLRSVRVPKKFDASSRGF-GFAEFTTKRDAVNAMNALKNT 765
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
L L FAEA+ KE EK ++
Sbjct: 766 HLLGRRLVL------AFAEAESDDPEKELEKMQQ 793
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 78/196 (39%), Gaps = 34/196 (17%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRTTF--------LGMAYIGFKDEKNCNKA 274
T+ V+NL + L FKPL A+V+T +G ++ F + + A
Sbjct: 602 TLYVRNLNFSTTTERLTEAFKPLSGFRSATVKTKMDPKRGVLSMGFGFVEFNNPETATAA 661
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
L G L +K S K + AA++ N ED+ + A
Sbjct: 662 LRA----MDGHDLEGHKLLIKASHKGADAAEERRN--------------EDAAK----KA 699
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
S +I ++NL + ++ D+ LF YG L V +P K ++GF F A A
Sbjct: 700 ASTKIIIKNLPFEASKKDVRALFTPYGQLRSVRVP-KKFDASSRGFGFAEFTTKRDAVNA 758
Query: 395 YQHLDGTVFLGRMLHL 410
L T LGR L L
Sbjct: 759 MNALKNTHLLGRRLVL 774
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 53 TEGKF---RRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYA 109
T+ KF RR ++GY + A A+ YFN T++ ++I E + D PKS +
Sbjct: 30 TDVKFFPHRRIGYVGYKTPEDAAKAVKYFNKTFIKLTKIYAEIARPIADKELPKSRRQLK 89
Query: 110 PDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQLHGKDVSKLLPLSNKDG 169
+ SA P+Q+ + +D +++ DP +FL+++ + SK +N D
Sbjct: 90 LEKSAPSNDEYRPPRQENDLKRKRD-----EAEQDPKLKEFLEVY-QPPSKTSLWANGDE 143
Query: 170 EEKEE--ENEDESNNQIA-HADISDMEYLKLKTKSKDTAPSDPSVP 212
+ E DE+ ++A D SD +Y + K K SVP
Sbjct: 144 QLNEAPIATADEAVPEVAVPEDESDDDYQVISKKPKIAPEPAASVP 189
>gi|326485490|gb|EGE09500.1| pre-rRNA processing protein Mrd1 [Trichophyton equinum CBS 127.97]
Length = 835
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 184/334 (55%), Gaps = 33/334 (9%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R +L+KN Y D++ L EPFG L R+L+PP G +VEF ++A AF LA
Sbjct: 492 RGNTALLLKNFTYGVSSEDIRKLCEPFGQLTRLLMPPSGTIAIVEFAMPDEALRAFKGLA 551
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + + LY+E AP+ +F E G + NQ+ V +
Sbjct: 552 YKRIGDSILYVEKAPKNLF-------------------EGGPPVTMPSLL---NQKVVSQ 589
Query: 565 ---VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
+ + DE P TL+++NLNF +T+ + F+ S V + DPK P
Sbjct: 590 GFSTSDTFKADEPEAPMESATLFVRNLNFTTTDAGLSDLFRPLDGFISAQVKTRPDPKKP 649
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
G+ LSMG+GFV+F +R ALK L LD+H++ +K S++ + +A +R+ N
Sbjct: 650 GERLSMGFGFVEFKSRAQAEAALKALNGYKLDQHELVIKPSHKGM--DAAEQRRREDNTK 707
Query: 682 KQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
K + +KI+++N+PFQA + ++ LF A+G+L+ VR+PKK + RGF F +F++
Sbjct: 708 KVSAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTA--RGFAFADFVSSR 765
Query: 740 EAKRAMKALCQSTHLYGRRLVLEW-AEEADNVED 772
EA+ AM AL ++THL GRRLVLE+ +EEA + ED
Sbjct: 766 EAENAMDAL-RNTHLLGRRLVLEFVSEEATDPED 798
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 37/125 (29%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP--------------------- 369
E I +GR+F+RNL Y +EDDL F ++G + EV P
Sbjct: 269 ESIRLTGRLFIRNLPYNASEDDLNAAFSRFGKIEEVRFPKFSPYPPYNQPIVYMMIILIG 328
Query: 370 ----------------IDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPG 413
D +KGFA + + + A +AY+ LDG F GR++H++P
Sbjct: 329 TSDASHMMLPGRTHVATDTRHSTSKGFAYIQYAESDAAIEAYKQLDGKDFQGRLMHILPA 388
Query: 414 KPKEN 418
K+
Sbjct: 389 SSKKT 393
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 21/196 (10%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPE 389
ES +FVRNL++T T+ L+ LF + + K + GF V F
Sbjct: 607 ESATLFVRNLNFTTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVEFKSRA 666
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A A + L+G L + P ++G + R+ D +V R+K
Sbjct: 667 QAEAALKALNGYKLDQHELVIKPS----HKG-----MDAAEQRRREDNTKKVSAKRTK-- 715
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT----GLVEFLQKNQAKAAFNSLA 504
I++KNLP++ D+ +LF +G L V VP + T +F+ +A+ A ++L
Sbjct: 716 IIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTARGFAFADFVSSREAENAMDALR 775
Query: 505 YTKFKEVPLYLEWAPE 520
T L LE+ E
Sbjct: 776 NTHLLGRRLVLEFVSE 791
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 80/199 (40%), Gaps = 36/199 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
T+ V+NL L F+PL A V+T +G ++ FK
Sbjct: 610 TLFVRNLNFTTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAE 669
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
AL K LN YK + S + + A + +ED+ +
Sbjct: 670 AAL---------KALNGYKLDQHELVI---------KPSHKGMDAAEQRRREDNTKKVS- 710
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
A+ +I ++NL + T+ D+ LF YG L V +P K+ D+T +GFA F+ A
Sbjct: 711 -AKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVP--KKFDRTARGFAFADFVSSREA 767
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A L T LGR L L
Sbjct: 768 ENAMDALRNTHLLGRRLVL 786
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T ++L+ F ++ VTD + RR F+G+ D A+ A+ YFN T++ S+I
Sbjct: 15 LTSDKLRHHFAQRFEVTDAHVIPN-----RRIGFVGFKGPDLAENAVKYFNKTFINMSKI 69
Query: 89 KVEKC 93
VE
Sbjct: 70 SVEMA 74
>gi|330935683|ref|XP_003305080.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
gi|311318026|gb|EFQ86793.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
Length = 825
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 187/338 (55%), Gaps = 29/338 (8%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L+AF + A+ ILVKN+P+ P +L+ LFE G + + L+PP G+T +VEF
Sbjct: 476 LEAFQR--SAKGDLAILVKNVPHTVTPDELRKLFEEHGTVTKFLMPPTGMTAIVEFSNVA 533
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
QAK AF SL+Y K K+ LYLE AP+ +F +EG T
Sbjct: 534 QAKTAFMSLSYRKMKDSILYLEKAPKDLF-------------------KEGVATNFVQTT 574
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ P + + + E E TLY++NLNF++T + + FK S TV
Sbjct: 575 FSEQPVIKPTATDLLVDAPEPEATNTATLYVRNLNFSTTIERLTEAFKPLSGFRSATVKT 634
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK LSMG+GFV+F + E+ AL+ + L+ H++ +K S++ ++A +
Sbjct: 635 KMDPKR--GVLSMGFGFVEFNSPETATAALRAMDGHDLEGHKLLIKASHKG--ADAAEER 690
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
R K +KI+++N+PF+A + +V LF +G+L+ VR+PKK S RGFGF E
Sbjct: 691 RNEDAAKKAASTKIIIKNLPFEASKKDVRALFTPYGQLRSVRVPKKFDASS--RGFGFAE 748
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVE 771
F TK +A AM AL ++THL GRRLVL +AE E+D+ E
Sbjct: 749 FTTKRDAVNAMNAL-KNTHLLGRRLVLAFAEAESDDPE 785
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 166/391 (42%), Gaps = 60/391 (15%)
Query: 53 TEGKF---RRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYA 109
T+ KF RR ++GY + A A+ YFN T++ ++I E + D PKS +
Sbjct: 30 TDVKFFPHRRIGYVGYKTPEDAAKAVKYFNKTFIKLTKIYAEIARPIADKELPKSRRQL- 88
Query: 110 PDSSAYQKLHNIAPKQD--LKPEHTKDSKPGK-KSKNDPTFSDFLQLHGKDVSKLLPLSN 166
KL AP D P D K + +++ DP +FL+++ + SK +N
Sbjct: 89 -------KLEKSAPSNDEYRPPRQENDLKRKRNEAEQDPKLKEFLEVY-QPPSKTSLWAN 140
Query: 167 KDGEEKE---EENEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQ 223
D + E ++ D SD +Y + K K AP + P PV +
Sbjct: 141 GDEQLNEAPIAAADEAVAEVAVPEDESDDDYQVISKKPK-IAPEPAASAPTQPTPVEQ-- 197
Query: 224 YHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWK 283
P P + ++ ++ + + +
Sbjct: 198 -----------------------PAPEPQAQNIDGSEPMEDVQEASAADQGPVSDVDWLR 234
Query: 284 GKQLNIYKYSKDNSAKYSGAA---------DDNNNASMENIKAK---HWKSQEDSVQFAE 331
+ + + +D+ +GA+ AS E ++A+ ++E +V A
Sbjct: 235 SRTNRVLELVEDDEVPSAGASALQAPIPQPPAATKASQEVVEAQLEPEQPTEEQAVVAAP 294
Query: 332 D----IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
D I E+GR+++RNL Y VTED++ + F K+G L EV +P+ K K KGFA V F
Sbjct: 295 DEEDKIRETGRLYLRNLHYEVTEDEIRQQFSKHGALEEVHVPLQKADGKGKGFAFVQFAN 354
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
P A +AY D T+F GR+LH+I K K++
Sbjct: 355 PSDAVEAYLDNDNTIFQGRLLHIISAKAKKD 385
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 131/333 (39%), Gaps = 73/333 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N+ +TVT D+L KLFE++G + + ++P T A+V F A A+ L
Sbjct: 489 ILVKNVPHTVTPDELRKLFEEHGTVTKFLMP------PTGMTAIVEFSNVAQAKTAFMSL 542
Query: 399 DGTVFLGRMLHLIPGKPKE--NEGNVDGKVHCCISER---KLDAFNQVV-----EARSKR 448
+L+L PK+ EG V SE+ K A + +V EA +
Sbjct: 543 SYRKMKDSILYLEKA-PKDLFKEGVATNFVQTTFSEQPVIKPTATDLLVDAPEPEATNTA 601
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGIT----GLVEFLQKNQAKAA 499
+ V+NL + T L F+P V P G+ G VEF A AA
Sbjct: 602 TLYVRNLNFSTTIERLTEAFKPLSGFRSATVKTKMDPKRGVLSMGFGFVEFNSPETATAA 661
Query: 500 FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQ 559
++ + L ++ + +G A EE + E+ A++
Sbjct: 662 LRAMDGHDLEGHKLLIKASHKGADA--------------------AEERRNEDAAKK--- 698
Query: 560 QGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
T + IKNL F +++ +R F G + SV V +K D
Sbjct: 699 ------------------AASTKIIIKNLPFEASKKDVRALFTPYGQLRSVRVPKKFDAS 740
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
S G+GF +F T+ A+ L+N+ L
Sbjct: 741 S------RGFGFAEFTTKRDAVNAMNALKNTHL 767
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 92/214 (42%), Gaps = 29/214 (13%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPID-KETDKTKGFALVTFLMPEHAT 392
+ ++VRNL+++ T + LT+ F+ A V +D K + GF V F PE AT
Sbjct: 600 TATLYVRNLNFSTTIERLTEAFKPLSGFRSATVKTKMDPKRGVLSMGFGFVEFNSPETAT 659
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
A + +DG G L + K + D R DA + + I++
Sbjct: 660 AALRAMDGHDLEGHKLLI-----KASHKGAD----AAEERRNEDAAKKAASTK----III 706
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAYT 506
KNLP+ D++ALF P+G L V VP G G EF K A A N+L T
Sbjct: 707 KNLPFEASKKDVRALFTPYGQLRSVRVPKKFDASSRGF-GFAEFTTKRDAVNAMNALKNT 765
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
L L FAEA+ KE EK ++
Sbjct: 766 HLLGRRLVL------AFAEAESDDPEKELEKMQQ 793
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 45/237 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRTTF--------LGMAYIGFKDEKNCNKA 274
T+ V+NL + L FKPL A+V+T +G ++ F + A
Sbjct: 602 TLYVRNLNFSTTIERLTEAFKPLSGFRSATVKTKMDPKRGVLSMGFGFVEFNSPETATAA 661
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
L G L +K S K + AA++ N ED+ + A
Sbjct: 662 LRA----MDGHDLEGHKLLIKASHKGADAAEERRN--------------EDAAK----KA 699
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
S +I ++NL + ++ D+ LF YG L V +P K ++GF F A A
Sbjct: 700 ASTKIIIKNLPFEASKKDVRALFTPYGQLRSVRVP-KKFDASSRGFGFAEFTTKRDAVNA 758
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
L T LGR L L + + ++ E++L+ Q V A++ ++ L
Sbjct: 759 MNALKNTHLLGRRLVLAFAEAESDD-----------PEKELEKMQQKVGAQANKVAL 804
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA-RKKDPKSPGQFLSMG 628
EED+ RE LY++NL++ TED IR+ F K G + V V +K D K G
Sbjct: 296 EEDKIRE---TGRLYLRNLHYEVTEDEIRQQFSKHGALEEVHVPLQKADGK------GKG 346
Query: 629 YGFVQF 634
+ FVQF
Sbjct: 347 FAFVQF 352
>gi|322695955|gb|EFY87755.1| putative MRD1 [Metarhizium acridum CQMa 102]
gi|326633449|gb|ADZ99447.1| pre-rRNA processing protein [Metarhizium anisopliae]
gi|326633451|gb|ADZ99448.1| pre-rRNA processing protein [Metarhizium anisopliae]
Length = 841
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 179/331 (54%), Gaps = 27/331 (8%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF + R ILVKN P+ T +L+ +FE G + RVL+PP G +V+F Q N
Sbjct: 486 LDAFKS--QRRGDTTILVKNFPFGTTMEELRKMFEEHGQVLRVLMPPTGTIAIVQFAQAN 543
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
AKAAF LAY + K+ L+LE AP+ + G+ ++ + A
Sbjct: 544 HAKAAFGKLAYRRIKDSVLFLEKAPKDLL--------------------RGDIFEQTSRA 583
Query: 555 EEDNQQGVPE--VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
+ GV + V + + ++ E T+L+I+NLNF +T + F+ S V
Sbjct: 584 ADQQATGVQKFTVSDLLSSGDKAEEVETTSLFIRNLNFATTTSRLAEAFESLDGFVSARV 643
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
K DPK PGQ LSMG+GF +F ++ ALK + LD H + +K S++ ++
Sbjct: 644 KTKMDPKKPGQTLSMGFGFAEFRSKTQAQAALKAMDGHVLDGHTLGVKASHKGQDAAEER 703
Query: 673 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
+ + A +KI+++N+PFQA + +V LF +G+L+ VR+PKK + RGF F
Sbjct: 704 RREDRAKKAAAQRTKIVIKNLPFQATKKDVRSLFGTYGQLRSVRVPKKADFTA--RGFAF 761
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
+F+T EA+ A+ AL + THL GRRLVL++
Sbjct: 762 ADFVTAREAENALNAL-KDTHLLGRRLVLDF 791
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 172/428 (40%), Gaps = 81/428 (18%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT+ + + F +TDV+L RR ++GY D A A+ YFN +Y+ S+
Sbjct: 15 ITEAEFRKHFSAGNREITDVKLIPQ-----RRIGYVGYKSADDAAGAVKYFNRSYIRMSK 69
Query: 88 IKVEKCSNLGDTT--KPKSWSKY--APDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKN 143
I VE + D K +WS AP + A D+ +TK K ++
Sbjct: 70 ISVETARPISDPAPRKGHNWSCNLGAPGDHTTPR---SASDHDV---NTKKRKREEQETA 123
Query: 144 DPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENED-ESNNQIAHADI------SDMEYLK 196
DP +FLQ+ S ++G ++ E+++ H ++ SD EY +
Sbjct: 124 DPKLREFLQVMS---------SGREGAVADDSTAAVEADHAFNHGEVAVPEGESDDEYEQ 174
Query: 197 LKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLK-----AYFKPLPLA 251
+ ++ + + +P RQ + V P KK K A
Sbjct: 175 IPSRREKSRRIEP------------RQDKSDNVTRQPPPRDKKTSKDDIEEAGENKAEAI 222
Query: 252 SVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGA----ADDN 307
T G + G D+ W + N D SGA D
Sbjct: 223 DSEMTDQGPSATGVTDDD------------WLRSRTNRLLDLVDPDDLGSGAVLSPVDGT 270
Query: 308 NNASMENIKAKHWKSQEDSVQFAEDI---------------AESGRIFVRNLSYTVTEDD 352
MEN + S E + D+ A + R+FVRNL Y+ TEDD
Sbjct: 271 TEQDMENDRLSSHSSDEVTPDTTADVTTSKETATEDAVSAIARTSRLFVRNLPYSATEDD 330
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
+ + F+K+G L EV LP+ + TKGFA+V F A +A+Q LDG F GR+LH+IP
Sbjct: 331 IWETFDKFGTLQEVHLPL-TASRATKGFAMVLFTDSSDAVRAFQALDGVTFQGRILHIIP 389
Query: 413 GKPKENEG 420
K +G
Sbjct: 390 ADAKREQG 397
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 131/337 (38%), Gaps = 76/337 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N + T ++L K+FE++G + V++P T A+V F HA A+ L
Sbjct: 499 ILVKNFPFGTTMEELRKMFEEHGQVLRVLMP------PTGTIAIVQFAQANHAKAAFGKL 552
Query: 399 ------DGTVFLGRM-LHLIPG-----KPKENEGNVDGKVHCCISERKLDAFNQVVEARS 446
D +FL + L+ G + + G +S+ L + ++ E +
Sbjct: 553 AYRRIKDSVLFLEKAPKDLLRGDIFEQTSRAADQQATGVQKFTVSDL-LSSGDKAEEVET 611
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV--------PPYGIT---GLVEFLQKNQ 495
+ ++NL + T + L FE V P ++ G EF K Q
Sbjct: 612 TS-LFIRNLNFATTTSRLAEAFESLDGFVSARVKTKMDPKKPGQTLSMGFGFAEFRSKTQ 670
Query: 496 AKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAE 555
A+AA ++ L+ GV K KG++ EE ++E+ A+
Sbjct: 671 AQAALKAMDGH-------VLDGHTLGV----KASHKGQDA---------AEERRREDRAK 710
Query: 556 EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARK 615
+ Q T + IKNL F +T+ +R F G + SV V +K
Sbjct: 711 KAAAQ-------------------RTKIVIKNLPFQATKKDVRSLFGTYGQLRSVRVPKK 751
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
D F + G+ F F T AL L+++ L
Sbjct: 752 AD------FTARGFAFADFVTAREAENALNALKDTHL 782
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 124/315 (39%), Gaps = 32/315 (10%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKP--LPLASVRTTFLGMAYIGFKDEKNCNKALNK 277
+R TI+VKN P G ++L+ F+ L + +A + F + A K
Sbjct: 492 QRRGDTTILVKNFPFGTTMEELRKMFEEHGQVLRVLMPPTGTIAIVQFAQANHAKAAFGK 551
Query: 278 -NKSFWKGKQLNIYKYSKD----NSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
K L + K KD + + + A D ++ S D AE+
Sbjct: 552 LAYRRIKDSVLFLEKAPKDLLRGDIFEQTSRAADQQATGVQKFTVSDLLSSGDK---AEE 608
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLM 387
+ E+ +F+RNL++ T L + FE + + K + GF F
Sbjct: 609 V-ETTSLFIRNLNFATTTSRLAEAFESLDGFVSARVKTKMDPKKPGQTLSMGFGFAEFRS 667
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSK 447
A A + +DG V G L G ++G R+ D + R+K
Sbjct: 668 KTQAQAALKAMDGHVLDGHTL----GVKASHKGQ-----DAAEERRREDRAKKAAAQRTK 718
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP---PYGITG--LVEFLQKNQAKAAFNS 502
I++KNLP++ D+++LF +G L V VP + G +F+ +A+ A N+
Sbjct: 719 --IVIKNLPFQATKKDVRSLFGTYGQLRSVRVPKKADFTARGFAFADFVTAREAENALNA 776
Query: 503 LAYTKFKEVPLYLEW 517
L T L L++
Sbjct: 777 LKDTHLLGRRLVLDF 791
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S++ VRN+P+ A + ++ E F FG L+ V LP + S +GF V F ++A RA
Sbjct: 315 SRLFVRNLPYSATEDDIWETFDKFGTLQEVHLP--LTASRATKGFAMVLFTDSSDAVRAF 372
Query: 746 KAL 748
+AL
Sbjct: 373 QAL 375
>gi|326474597|gb|EGD98606.1| pre-rRNA processing protein Mrd1 [Trichophyton tonsurans CBS
112818]
Length = 798
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 183/334 (54%), Gaps = 33/334 (9%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R +L+KN Y D++ L EPFG L R+L+PP G +VEF ++A AF LA
Sbjct: 455 RGNTALLLKNFTYGVSSEDIRKLCEPFGQLTRLLMPPSGTIAIVEFAMPDEALRAFKGLA 514
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + + LY+E AP+ +F E G + NQ+ V +
Sbjct: 515 YKRIGDSILYVEKAPKNLF-------------------EGGPPVTMPSLL---NQKVVSQ 552
Query: 565 ---VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
+ + DE P TL+++NLNF +T+ + F+ S V + DPK P
Sbjct: 553 GFSTSDTFKADEPEAPMESATLFVRNLNFTTTDAGLSDLFRPLDGFISAQVKTRPDPKKP 612
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
G+ LSMG+GFV+F R ALK L LD+H++ +K S++ + +A +R+ N
Sbjct: 613 GERLSMGFGFVEFKGRAQAEAALKALNGYKLDQHELVIKPSHKGM--DAAEQRRREDNTK 670
Query: 682 KQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
K + +KI+++N+PFQA + ++ LF A+G+L+ VR+PKK + RGF F +F++
Sbjct: 671 KASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTA--RGFAFADFVSSR 728
Query: 740 EAKRAMKALCQSTHLYGRRLVLEW-AEEADNVED 772
EA+ AM AL ++THL GRRLVLE+ +EEA + ED
Sbjct: 729 EAENAMDAL-RNTHLLGRRLVLEFVSEEATDPED 761
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I +GR+F+RNL Y +EDDL F ++G + E + D +KGFA + ++ +
Sbjct: 269 ESIRLTGRLFIRNLPYNASEDDLNAAFSRFGKIEETHVATDTRHSTSKGFAYIQYVESDA 328
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A +AY+ LDG F GR++H++P K
Sbjct: 329 AIEAYKQLDGKDFQGRLMHILPASSK 354
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 81/199 (40%), Gaps = 36/199 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
T+ V+NL L F+PL A V+T +G ++ FK
Sbjct: 573 TLFVRNLNFTTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVEFKGRAQAE 632
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
AL K LN YK + S + + A + +ED+ + A
Sbjct: 633 AAL---------KALNGYKLDQHELVI---------KPSHKGMDAAEQRRREDNTKKAS- 673
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
A+ +I ++NL + T+ D+ LF YG L V +P K+ D+T +GFA F+ A
Sbjct: 674 -AKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVP--KKFDRTARGFAFADFVSSREA 730
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A L T LGR L L
Sbjct: 731 ENAMDALRNTHLLGRRLVL 749
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 21/196 (10%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPE 389
ES +FVRNL++T T+ L+ LF + + K + GF V F
Sbjct: 570 ESATLFVRNLNFTTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVEFKGRA 629
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A A + L+G L + P ++G + R+ D + R+K
Sbjct: 630 QAEAALKALNGYKLDQHELVIKPS----HKG-----MDAAEQRRREDNTKKASAKRTK-- 678
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT----GLVEFLQKNQAKAAFNSLA 504
I++KNLP++ D+ +LF +G L V VP + T +F+ +A+ A ++L
Sbjct: 679 IIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTARGFAFADFVSSREAENAMDALR 738
Query: 505 YTKFKEVPLYLEWAPE 520
T L LE+ E
Sbjct: 739 NTHLLGRRLVLEFVSE 754
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T ++L+ F ++ VTD + RR F+G+ D A+ A+ YFN T++ S+I
Sbjct: 15 LTSDKLRHHFAQRFEVTDAHVIPN-----RRIGFVGFKGPDLAENAVKYFNKTFINMSKI 69
Query: 89 KVEKC 93
VE
Sbjct: 70 SVEMA 74
>gi|297806589|ref|XP_002871178.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
gi|297317015|gb|EFH47437.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 217/793 (27%), Positives = 354/793 (44%), Gaps = 168/793 (21%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T+++L+ F +KG +TDV+L+ ++G+ R+FA+IG+ E +AQ A+ YFN +++ + +I
Sbjct: 1 MTEDRLRNVFSKKGEITDVKLRRKSDGRSRQFAYIGFRTEQEAQDAITYFNKSFIDTIQI 60
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
VE P+ K +S + + + K K ++ +DP
Sbjct: 61 SVEVA-----IPPPRKEGKVIENSEHFSNAY---------AKGDKKFKKKAEADHDPQLQ 106
Query: 149 DFLQLHGKD--VSKLLPLSNKDGEEK----------EEENE------DESNNQIAHADIS 190
+FL H K S + + G+EK +E N+ D + N++ D+S
Sbjct: 107 EFLDQHTKLKFWSNDMCIPRSSGKEKVSPVIFSNGADEPNKAKTSLLDTTENKVGD-DVS 165
Query: 191 DMEYLKLK-----------TKSK-DTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKK 238
DMEY K + T S+ D + P + V + V+NLP +
Sbjct: 166 DMEYFKSRIYGILQDDYYETDSREDAIHAFPIDGDIEADRVDVLDTGRLFVRNLPYTATE 225
Query: 239 KDLKAYFKPLPLASVRTTFL--------GMAYIGFKDEKNCNKALNK--NKSFWKGKQLN 288
++L +F S L GMA++ ++ + +A+ + NK F +G+ L+
Sbjct: 226 EELTEHFSKFGEISEVHLVLDKETKNSRGMAFVLYQIPEYAKRAMEELDNKDF-QGRLLH 284
Query: 289 IYKYSK-DNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYT 347
I K D + + NN++++ + + Q + + + + F+R T
Sbjct: 285 ILPAKKPDKQVSVTSSMFRNNSSNLPKAFKQKREEQRKASEASGNTKAWNSFFMR--PDT 342
Query: 348 VTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRM 407
V E+ + YG L D+E D D V L
Sbjct: 343 VVEN----IVRCYGVTKSEFL--DRECD-----------------------DPAVRLALG 373
Query: 408 LHLIPGKPKENEGNVDGKVHCC--ISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLK 465
+ + KE +V S RK D V+ RSK I+LVKNLP+ + +L
Sbjct: 374 ETKVIMETKEALAKAGVRVTSLEEFSARKGD-----VKNRSKHILLVKNLPFASSEKELA 428
Query: 466 ALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE 525
+F FG L ++++P L FL+ +A+AA + Y ++K+ PLYLEWAPE +
Sbjct: 429 QMFGRFGSLDKIVLPRTKTLALFVFLKPAEARAAMKGMKYKRYKDAPLYLEWAPEDIL-- 486
Query: 526 AKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN----VEEDEEREPEPDT 581
E A DN + +VEEN + D++ + D
Sbjct: 487 -------------------------EPKALPDNNEKTSDVEENDVRRLNLDQQVGIDLDI 521
Query: 582 T----LYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKKDPKSPGQFLSMGYGFVQF 634
T LY+KNLNFN+T++S+R+H K G I SV + KK+ KS + S GYGFV+F
Sbjct: 522 TESNVLYVKNLNFNTTDESLRKHLTELVKQGKILSVKI--KKNGKSRPR--SSGYGFVEF 577
Query: 635 YTRESLNQALKVLQNSS-LDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNI 693
+ E+ + LQ ++ LD H++ L+ S E++ T
Sbjct: 578 DSVETATSVYRDLQGTTFLDRHKLILRFS----ENKRT---------------------- 611
Query: 694 PFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTH 753
F+A + E+ +L FG++K V LP+K G + G+GF+ F TK EA A KAL +TH
Sbjct: 612 -FEATKQELRQLCSPFGQIKRVGLPEK--NPGRYAGYGFIVFGTKQEALNAKKALS-NTH 667
Query: 754 LYGRRLVLEWAEE 766
YGR LVL+WA +
Sbjct: 668 FYGRPLVLQWARD 680
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 121/522 (23%), Positives = 194/522 (37%), Gaps = 94/522 (18%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRR-FAFIGYHREDQAQAALDYFNNTYVFS 85
Y T+E+L F + G +++V L E K R AF+ Y + A+ A++ +N F
Sbjct: 221 YTATEEELTEHFSKFGEISEVHLVLDKETKNSRGMAFVLYQIPEYAKRAMEELDNKD-FQ 279
Query: 86 SRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDP 145
R+ L K + + SS ++ + PK K + + K + S N
Sbjct: 280 GRL-------LHILPAKKPDKQVSVTSSMFRNNSSNLPKA-FKQKREEQRKASEASGNTK 331
Query: 146 TFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTA 205
++ F V ++ E + D+ ++A + + K
Sbjct: 332 AWNSFFMRPDTVVENIVRCYGVTKSEFLDRECDDPAVRLALGETKVIMETKEALAKAGVR 391
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYF--------------KPLPL- 250
+ K V R H ++VKNLP +K+L F K L L
Sbjct: 392 VTSLEEFSARKGDVKNRSKHILLVKNLPFASSEKELAQMFGRFGSLDKIVLPRTKTLALF 451
Query: 251 -----ASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAAD 305
A R GM Y +KD + W + + K DN+ K S
Sbjct: 452 VFLKPAEARAAMKGMKYKRYKDAPLYLE--------WAPEDILEPKALPDNNEKTSDV-- 501
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD----LTKLFEKYG 361
+ N+ N+ + V DI ES ++V+NL++ T++ LT+L ++
Sbjct: 502 EENDVRRLNL--------DQQVGIDLDITESNVLYVKNLNFNTTDESLRKHLTELVKQGK 553
Query: 362 PLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGN 421
L+ I K ++ G+ V F E AT Y+ L GT FL R H + + EN
Sbjct: 554 ILSVKIKKNGKSRPRSSGYGFVEFDSVETATSVYRDLQGTTFLDR--HKLILRFSEN--- 608
Query: 422 VDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP 481
+R +A Q +L+ L PFG + RV +P
Sbjct: 609 ----------KRTFEATKQ----------------------ELRQLCSPFGQIKRVGLPE 636
Query: 482 -----YGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
Y G + F K +A A +L+ T F PL L+WA
Sbjct: 637 KNPGRYAGYGFIVFGTKQEALNAKKALSNTHFYGRPLVLQWA 678
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVR--LPKKMVGSGLHRGFGFVEFITKNEAKRA 744
++ VRN+P+ A + E+ E F FGE+ V L K+ S RG FV + AKRA
Sbjct: 213 RLFVRNLPYTATEEELTEHFSKFGEISEVHLVLDKETKNS---RGMAFVLYQIPEYAKRA 269
Query: 745 MKALCQSTHLYGRRLVLEWAEEAD 768
M+ L + GR L + A++ D
Sbjct: 270 MEEL-DNKDFQGRLLHILPAKKPD 292
>gi|302507734|ref|XP_003015828.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
gi|291179396|gb|EFE35183.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
Length = 826
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 184/334 (55%), Gaps = 33/334 (9%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R +L+KN Y D++ L EPFG L R+L+PP G +VEF ++A AF LA
Sbjct: 483 RGNTALLLKNFTYGVSSEDIRKLCEPFGQLTRLLMPPSGTIAIVEFAMPDEALRAFKGLA 542
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + + LY+E AP+ +F E G + NQ+ V +
Sbjct: 543 YKRIGDSILYVEKAPKNLF-------------------EGGPPVTMPSLL---NQKVVSQ 580
Query: 565 ---VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
+ + DE P TL+++NLNF +T+ + F+ S V + DPK P
Sbjct: 581 GFSTSDTFKADEPEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKP 640
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
G+ LSMG+GFV+F +R ALK L LD+H++ +K S++ + +A +R+ N
Sbjct: 641 GERLSMGFGFVEFKSRAQAEAALKALNGYKLDQHELVIKPSHKGM--DAAEQRRREDNAK 698
Query: 682 KQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
K + +KI+++N+PFQA + ++ LF A+G+L+ VR+PKK + RGF F +F++
Sbjct: 699 KASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTA--RGFAFADFVSSR 756
Query: 740 EAKRAMKALCQSTHLYGRRLVLEW-AEEADNVED 772
EA+ AM AL ++THL GRRLVLE+ +EEA + ED
Sbjct: 757 EAENAMDAL-RNTHLLGRRLVLEFVSEEATDPED 789
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE------------VILPIDKETDKTK 378
E I +GR+F+RNL Y +EDDL F ++G + E + + + K
Sbjct: 285 ESIRLTGRLFIRNLPYNASEDDLNATFSRFGKIEEEEYFSRCLFNLMTVSFLIAAINYCK 344
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
GFA + ++ + A +AY+ LDG F GR++H++P K
Sbjct: 345 GFAYIQYVESDAAIEAYKQLDGKDFQGRLMHILPASSK 382
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 81/199 (40%), Gaps = 36/199 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
T+ V+NL L F+PL A V+T +G ++ FK
Sbjct: 601 TLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAE 660
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
AL K LN YK + S + + A + +ED+ + A
Sbjct: 661 AAL---------KALNGYKLDQHELVI---------KPSHKGMDAAEQRRREDNAKKAS- 701
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
A+ +I ++NL + T+ D+ LF YG L V +P K+ D+T +GFA F+ A
Sbjct: 702 -AKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVP--KKFDRTARGFAFADFVSSREA 758
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A L T LGR L L
Sbjct: 759 ENAMDALRNTHLLGRRLVL 777
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 21/196 (10%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPE 389
ES +FVRNL++ T+ L+ LF + + K + GF V F
Sbjct: 598 ESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVEFKSRA 657
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A A + L+G L + P ++G + R+ D + R+K
Sbjct: 658 QAEAALKALNGYKLDQHELVIKPS----HKG-----MDAAEQRRREDNAKKASAKRTK-- 706
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT----GLVEFLQKNQAKAAFNSLA 504
I++KNLP++ D+ +LF +G L V VP + T +F+ +A+ A ++L
Sbjct: 707 IIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTARGFAFADFVSSREAENAMDALR 766
Query: 505 YTKFKEVPLYLEWAPE 520
T L LE+ E
Sbjct: 767 NTHLLGRRLVLEFVSE 782
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T ++L+ F ++ VTD + RR F+G+ D A+ A+ YFN T++ S+I
Sbjct: 15 LTSDKLRNHFAQRFEVTDAHVIPN-----RRIGFVGFKGPDLAENAVKYFNKTFINMSKI 69
Query: 89 KVE 91
VE
Sbjct: 70 SVE 72
>gi|154280340|ref|XP_001540983.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412926|gb|EDN08313.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 675
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 183/332 (55%), Gaps = 25/332 (7%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F Q R ILVKN + DL+ LFEPFG + R+L+PP G +VEF+ +
Sbjct: 317 LDSFKQ--RERGNTAILVKNFSFGVKADDLRKLFEPFGQIKRLLIPPSGTIAIVEFVMAD 374
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+ + AF LAY K + L+LE AP+ +F EK + + +
Sbjct: 375 ECQKAFKGLAYRKLGDSILFLERAPKDLF---------DEKATAARVVAPPPKVVSQTFS 425
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
D + E +E P +TL+++NLNF++T + F+ S V
Sbjct: 426 TSDTFKAT-------ETEEAETPLETSTLFVRNLNFSTTNARLTEVFQPLDGFLSARVKT 478
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PG+ LSMG+GFV+F T AL +Q LD+H++ +K S++ ++ A +
Sbjct: 479 KADPKRPGETLSMGFGFVEFRTAAQARAALATMQGYKLDQHELVVKTSHKAMD--AAEER 536
Query: 675 RKSSNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
R+ N K G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K + RGF F
Sbjct: 537 RREDNAKKLAMRGTKILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDRTA--RGFAF 594
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+FI+ EA+ AM AL ++THL GRRLVLE+A
Sbjct: 595 ADFISAREAENAMDAL-KNTHLLGRRLVLEFA 625
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 311 SMENIKAKHWKSQEDSVQFAEDIAESG-RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP 369
S + + A + +ED+ A+ +A G +I ++NL + T+ D+ LF YG L V +P
Sbjct: 526 SHKAMDAAEERRREDN---AKKLAMRGTKILIKNLPFQATKKDIRNLFSAYGKLRSVRVP 582
Query: 370 IDKETDKT-KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
++ D+T +GFA F+ A A L T LGR L L
Sbjct: 583 --QKFDRTARGFAFADFISAREAENAMDALKNTHLLGRRLVL 622
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 124/320 (38%), Gaps = 38/320 (11%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKAL 275
+R I+VKN GVK DL+ F+P ++ + +A + F C KA
Sbjct: 323 RERGNTAILVKNFSFGVKADDLRKLFEPF--GQIKRLLIPPSGTIAIVEFVMADECQKAF 380
Query: 276 NKNKSFWK--GKQLNIYKYSKD----NSAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
K ++ K L + + KD + A S + +K+ E +
Sbjct: 381 -KGLAYRKLGDSILFLERAPKDLFDEKATAARVVAPPPKVVSQTFSTSDTFKATE--TEE 437
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVT 384
AE E+ +FVRNL+++ T LT++F+ + + + + GF V
Sbjct: 438 AETPLETSTLFVRNLNFSTTNARLTEVFQPLDGFLSARVKTKADPKRPGETLSMGFGFVE 497
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEA 444
F A A + G L + K ER+ + + +
Sbjct: 498 FRTAAQARAALATMQGYKLDQHELVV----------KTSHKAMDAAEERRREDNAKKLAM 547
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKA 498
R + IL+KNLP++ D++ LF +G L V VP G +F+ +A+
Sbjct: 548 RGTK-ILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDRTARGF-AFADFISAREAEN 605
Query: 499 AFNSLAYTKFKEVPLYLEWA 518
A ++L T L LE+A
Sbjct: 606 AMDALKNTHLLGRRLVLEFA 625
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ ++L+ +F + VTD + RR F+G+ +AQ A+ YFN TY+ S+I
Sbjct: 16 FSNDELRKRFSTRYQVTDAHVIPK-----RRIGFVGFKTPTEAQDAVKYFNKTYIRMSKI 70
Query: 89 KVE 91
VE
Sbjct: 71 AVE 73
>gi|451993063|gb|EMD85538.1| hypothetical protein COCHEDRAFT_1187995 [Cochliobolus
heterostrophus C5]
Length = 828
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 186/338 (55%), Gaps = 23/338 (6%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L+AF + A+ ILVKN+P+ +L+ LFE G + + L+PP G+T +VEF
Sbjct: 473 LEAFQR--SAKGDLAILVKNIPHGVTADELRKLFEEHGTVNKFLMPPTGMTAIVEFANVA 530
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
QAKAAF SL+Y K K+ LYLE AP+ +F KE + + +
Sbjct: 531 QAKAAFMSLSYRKMKDSILYLEKAPKDLF---KEGVATNFVQTTPSASVSTSTQPGTKLS 587
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
D +PE E TLY++NLNF+++ + + FK S V
Sbjct: 588 ATDLLVDIPEPEATNT----------ATLYVRNLNFSTSTERLTEAFKPLSGFRSAKVKT 637
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK LSMG+GFV+F + E+ AL+ + L+ H++++K S+R ++A +
Sbjct: 638 KVDPKR--GVLSMGFGFVEFNSPETATAALRAMDGYDLEGHKLQIKASHRG--ADAAEER 693
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
R K +KI+++N+PF+A + EV LF +G+L+ VR+PKK S RGFGF E
Sbjct: 694 RNEDAAKKAASTKIIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDASS--RGFGFAE 751
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVE 771
F TK +A AM AL ++THL GRRLVL +AE E+D+ E
Sbjct: 752 FTTKRDAVNAMNAL-KNTHLLGRRLVLAFAEAESDDPE 788
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 57/86 (66%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I E+GR+++RNL Y VTED++ + F K+G L EV +P+ K K KGFA V F P A
Sbjct: 297 IRETGRLYLRNLHYEVTEDEIREQFSKHGALEEVHVPLKKADGKGKGFAFVQFQNPNDAV 356
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN 418
+AY D T+F GR+LH+I K K++
Sbjct: 357 EAYLDNDNTIFQGRLLHIISAKAKKD 382
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 63/344 (18%)
Query: 227 IVVKNLPAGVKKKDLKAYFKP--------LP------------LASVRTTFLGMAYIGFK 266
I+VKN+P GV +L+ F+ +P +A + F+ ++Y K
Sbjct: 486 ILVKNIPHGVTADELRKLFEEHGTVNKFLMPPTGMTAIVEFANVAQAKAAFMSLSYRKMK 545
Query: 267 DEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDS 326
D + K+ F +G N + + SA S + S ++
Sbjct: 546 DSILYLEKAPKD-LFKEGVATNFVQTTP--SASVSTSTQPGTKLSATDL----------L 592
Query: 327 VQFAE-DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPID-KETDKTKGFAL 382
V E + + ++VRNL+++ + + LT+ F+ A+V +D K + GF
Sbjct: 593 VDIPEPEATNTATLYVRNLNFSTSTERLTEAFKPLSGFRSAKVKTKVDPKRGVLSMGFGF 652
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
V F PE AT A + +DG G L + K + D R DA +
Sbjct: 653 VEFNSPETATAALRAMDGYDLEGHKLQI-----KASHRGAD----AAEERRNEDAAKKAA 703
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQA 496
+ I++KNLP+ +++ALF P+G L V VP G G EF K A
Sbjct: 704 STK----IIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDASSRGF-GFAEFTTKRDA 758
Query: 497 KAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
A N+L T L L FAEA+ KE EK ++
Sbjct: 759 VNAMNALKNTHLLGRRLVL------AFAEAESDDPEKELEKMQQ 796
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 128/339 (37%), Gaps = 79/339 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N+ + VT D+L KLFE++G + + ++P T A+V F A A+ L
Sbjct: 486 ILVKNIPHGVTADELRKLFEEHGTVNKFLMP------PTGMTAIVEFANVAQAKAAFMSL 539
Query: 399 DGTVFLGRMLHLIPGKPKE--NEGNVDGKVHCCISER---------KLDAFNQVV----- 442
+L+L PK+ EG V S KL A + +V
Sbjct: 540 SYRKMKDSILYLEKA-PKDLFKEGVATNFVQTTPSASVSTSTQPGTKLSATDLLVDIPEP 598
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGIT----GLVEFLQK 493
EA + + V+NL + T L F+P V P G+ G VEF
Sbjct: 599 EATNTATLYVRNLNFSTSTERLTEAFKPLSGFRSAKVKTKVDPKRGVLSMGFGFVEFNSP 658
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
A AA ++ EG + K +G + EE + E+
Sbjct: 659 ETATAALRAMDGYDL-----------EGHKLQIKASHRG---------ADAAEERRNEDA 698
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
A++ T + IKNL F +++ +R F G + SV V
Sbjct: 699 AKKAAS---------------------TKIIIKNLPFEASKKEVRALFAPYGQLRSVRVP 737
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+K D S G+GF +F T+ A+ L+N+ L
Sbjct: 738 KKFDASS------RGFGFAEFTTKRDAVNAMNALKNTHL 770
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 551 ENTAEEDNQQGVP-----EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
E++AEE Q P E E DEE + LY++NL++ TED IR F K G
Sbjct: 266 EDSAEEVEAQPSPPQPTAEQPETAAPDEEDKIRETGRLYLRNLHYEVTEDEIREQFSKHG 325
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQF 634
+ V V K K+ G+ G+ FVQF
Sbjct: 326 ALEEVHVPLK---KADGK--GKGFAFVQF 349
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 27/197 (13%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
K T++ ++ F K VTDV+ RR ++GY + A A+ YFN T++ ++
Sbjct: 14 KFTEDDVRKHFA-KFPVTDVKF-----FPHRRIGYVGYKTPEDAAKAVKYFNKTFIKLTK 67
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQD-LKPEHTKDSKPGKK---SKN 143
I VE +P+ P S QKL AP D KP ++++ +K ++
Sbjct: 68 IYVE-------IARPE-----LPKSRRQQKLEKSAPTNDEYKPPLRQENELKRKRDETEQ 115
Query: 144 DPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEEN-EDESNNQIA-HADISDMEYLKLKTKS 201
DP +FL+++ + SK +N + E ED + +IA + SD EY + K
Sbjct: 116 DPRLKEFLEVY-QPPSKTKIWANGESHVDEANTAEDTAVPEIAVPEEESDDEYQVISKKP 174
Query: 202 KDTAPSDPSVPPVSKAP 218
K A +P+ P P
Sbjct: 175 KVAA--EPTATPAPAQP 189
>gi|403165616|ref|XP_003325592.2| hypothetical protein PGTG_07425 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165799|gb|EFP81173.2| hypothetical protein PGTG_07425 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 759
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 187/340 (55%), Gaps = 29/340 (8%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
++AF ++ ARS ILVKN+PY T +KALF G + +VL+PP G +VE K
Sbjct: 408 VEAFEKLKSARSPTTILVKNIPYNTSTNVIKALFSEHGSVLKVLMPPSGTIAVVEMGDKQ 467
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
K+AF SL+Y + LYLE AP ++ + + K E
Sbjct: 468 DTKSAFRSLSYKRIGNSVLYLEKAPLDLW--------------------KIDPAKPEVAT 507
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
++ Q P +E E+ EP +TL++KNL+F +T D++ F +
Sbjct: 508 PQEISQAKPSSKE-----EKESGEPGSTLFVKNLSFGTTSDALASRFSNLTGYLFSRIQT 562
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK+ LSMG+GFV F T +S QAL+ +Q LD H +ELK + R E E K
Sbjct: 563 KPDPKNAEHRLSMGFGFVGFRTVDSAQQALQRMQGCYLDGHTLELKFAKRGREEEEKEEK 622
Query: 675 RKSSNVAKQTGS-KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
K+T + K+L++N+PF+ + E+ ELF +G+LK +RLPKK+ RGFGFV
Sbjct: 623 ALDGEKGKKTATNKLLIKNLPFEINKKELYELFGVYGKLKSIRLPKKL--DRKSRGFGFV 680
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDI 773
E+ TK EA+ A+K+L + +HL GR LV+E+A +AD+ D+
Sbjct: 681 EYHTKKEAQEALKSL-KFSHLLGRHLVIEYANDADSTLDL 719
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 69/116 (59%), Gaps = 9/116 (7%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I ESGR+F+RNL+++VTE+++ +FE +G +A+V + +D E K KG V++ A
Sbjct: 232 ILESGRLFLRNLAFSVTEEEIRAIFEPFGNVAQVHILLDNER-KPKGLGYVSYSRSSDAL 290
Query: 393 QAYQHLDGTVFLGRMLHLIPG---KPKENEGNVDGKVHCCI-----SERKLDAFNQ 440
+AY+ LD + F GR+LH++P P+ K H + ++RKL++ Q
Sbjct: 291 EAYRKLDQSDFQGRLLHILPAVTRNPRGESSTSASKAHNTVKMEQDAKRKLESSKQ 346
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 124/313 (39%), Gaps = 36/313 (11%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKALNK 277
R TI+VKN+P +KA F SV + +A + D+++ A
Sbjct: 418 RSPTTILVKNIPYNTSTNVIKALFS--EHGSVLKVLMPPSGTIAVVEMGDKQDTKSAFRS 475
Query: 278 NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG 337
G + + + + K A + A+ + I S+E+ ++ E G
Sbjct: 476 LSYKRIGNSVLYLEKAPLDLWKIDPAKPE--VATPQEISQAKPSSKEE-----KESGEPG 528
Query: 338 R-IFVRNLSYTVTEDDLTKLFEKY-GPLAEVIL----PIDKETDKTKGFALVTFLMPEHA 391
+FV+NLS+ T D L F G L I P + E + GF V F + A
Sbjct: 529 STLFVKNLSFGTTSDALASRFSNLTGYLFSRIQTKPDPKNAEHRLSMGFGFVGFRTVDSA 588
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
QA Q + G G L L K G+ E+ LD A +K +L
Sbjct: 589 QQALQRMQGCYLDGHTLELKFAK--------RGREEEEKEEKALDGEKGKKTATNK--LL 638
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAY 505
+KNLP+ +L LF +G L + +P G G VE+ K +A+ A SL +
Sbjct: 639 IKNLPFEINKKELYELFGVYGKLKSIRLPKKLDRKSRGF-GFVEYHTKKEAQEALKSLKF 697
Query: 506 TKFKEVPLYLEWA 518
+ L +E+A
Sbjct: 698 SHLLGRHLVIEYA 710
>gi|336464808|gb|EGO53048.1| hypothetical protein NEUTE1DRAFT_73283 [Neurospora tetrasperma FGSC
2508]
Length = 827
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/338 (35%), Positives = 181/338 (53%), Gaps = 36/338 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
++AF + R ILVKN+ T+ +L+ LFE G + RVL+PP G +V+F Q
Sbjct: 478 IEAFK--TQQRGDTTILVKNIKNTTI-EELRTLFEEHGTVLRVLMPPSGTIAIVQFAQPV 534
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
Q + AF AY++FK+ L+LE P+G+F + N A
Sbjct: 535 QCRTAFARKAYSRFKDSVLFLEKGPKGLFTD--------------------------NVA 568
Query: 555 EEDNQQ--GV--PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
+ + GV P V + +E D+ E ++L+++NLNF++T + FK
Sbjct: 569 VPTDARPAGVQKPSVADLLERDDAEEQLETSSLFVRNLNFSTTSQGLTDAFKHLDGFVQA 628
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK PGQ LSMG+GFV F T++ ALKV+ LD H+I +K S+R L++
Sbjct: 629 KVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQAALKVMDGQVLDAHKISVKASHRGLDAAE 688
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
+ + A G+K++V+N+PF+ + EV LF +G+L +R+PKK S RGF
Sbjct: 689 ERRREDMAKKAANQGTKLVVKNLPFEVTKKEVRTLFSTYGKLVALRIPKKFNQSS--RGF 746
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
F EF T EA A +L + TH+ GRRLV+++A+ D
Sbjct: 747 AFAEFSTAKEALNAFNSL-KDTHILGRRLVIDFAQAED 783
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I ++ R+F+RNLSYTVTEDD+ + F K+G L EV +P+D + +KGFA++ + P A
Sbjct: 304 IEKTSRLFLRNLSYTVTEDDVREHFAKFGTLEEVHVPLDSK-GHSKGFAMIRYEKPASAL 362
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPK 416
A+Q DGTVF GR++H++P K
Sbjct: 363 AAFQ-TDGTVFQGRIVHILPAAAK 385
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-------GFAL 382
AE+ E+ +FVRNL+++ T LT F+ + + +TD K GF
Sbjct: 592 AEEQLETSSLFVRNLNFSTTSQGLTDAFKHLDGFVQA--KVKTKTDPKKPGQVLSMGFGF 649
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
V F + A A + +DG V + + K + +D R+ D +
Sbjct: 650 VAFRTKDQAQAALKVMDGQVLDAHKISV-----KASHRGLD----AAEERRREDMAKKAA 700
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQA 496
+K ++VKNLP+ +++ LF +G L + +P G EF +A
Sbjct: 701 NQGTK--LVVKNLPFEVTKKEVRTLFSTYGKLVALRIPKKFNQSSRGF-AFAEFSTAKEA 757
Query: 497 KAAFNSLAYTKFKEVPLYLEWA------PEGVFAEAKEKSKGK 533
AFNSL T L +++A PE A ++K++ +
Sbjct: 758 LNAFNSLKDTHILGRRLVIDFAQAEDIDPEDQIAAIEKKTRAQ 800
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 29 ITQEQLKAKFEEKG-TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT+ + + F +G VTDV+L R F+GY + A A+ YFN +++ SR
Sbjct: 16 ITEAEFRKHFSAEGRQVTDVKLIPA-----RHIGFVGYKSAEDAARAVKYFNRSFIRMSR 70
Query: 88 IKVEKCSNLGDTTKPK 103
I V+ + D +KP+
Sbjct: 71 ISVDIAKPIAD-SKPQ 85
>gi|307111065|gb|EFN59300.1| hypothetical protein CHLNCDRAFT_7238, partial [Chlorella
variabilis]
Length = 556
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 193/352 (54%), Gaps = 24/352 (6%)
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
ARS R+++VKNLP+ +L+ALF G LGR+++PP LVE+L+ A+ AF +L
Sbjct: 211 ARSDRVLVVKNLPFTASLEELEALFGTIGALGRLVLPPTRTLALVEYLEAQDARRAFKAL 270
Query: 504 AYTKFKEVPLYLEWAPEGVFA---EAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQ 560
AY +++ VPLYLEWAP +F+ + + K + +
Sbjct: 271 AYKRYQHVPLYLEWAPRTIFSTPPPPRPAAGTPAAAPAAAAAAAAPAGKAGKAGKGSAGK 330
Query: 561 GVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA-----SVTVARK 615
E+ V E + E E +++++KNL + + + +++ HF A +V VA++
Sbjct: 331 AAGELLTGVAEAQAEEVE-SSSIFVKNLAWATEDAALKAHFDAAVSAAGGAVRAVKVAKR 389
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRN---LESEATT 672
K P G+ LS G+GFV+ + + A+K LQ ++LD H++ L+ S EA
Sbjct: 390 KGPD--GKLLSAGFGFVECSSDAAAKAAVKALQGTALDGHKLVLQLSTSRPGGAAGEAGA 447
Query: 673 VKRKSSNVAKQTGS-------KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 725
KRK+ G+ K++VRN+ F+A + ++ LF FG + RLP+K G
Sbjct: 448 GKRKADGTGSTGGAAVLPDTCKVVVRNVAFEATRKDIMGLFTPFGHVNSCRLPRKF--DG 505
Query: 726 LHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRT 777
HRGF FV+F TK EA+ AM+A+ Q HLYGRRLVLEWAEE ++++R +T
Sbjct: 506 THRGFAFVDFATKQEARNAMEAV-QGAHLYGRRLVLEWAEEEGGLDELRAKT 556
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 62/82 (75%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
IA++GR+FVRNL Y+ TE +L LFE YG ++EV L +D+ + K+KGFALV F P+ A
Sbjct: 14 IADTGRLFVRNLPYSATEAELQALFEGYGDVSEVHLVLDRASKKSKGFALVQFADPQDAV 73
Query: 393 QAYQHLDGTVFLGRMLHLIPGK 414
+A+ LD ++F GR++H++PGK
Sbjct: 74 KAHAELDASIFQGRLIHILPGK 95
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 23/141 (16%)
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSK 687
G + RE+ + A+++ +L E Q+ + + R L EA +R++ VA+ +
Sbjct: 164 GVSKAELLDREAGDMAVRM----ALGETQV-IAETKRAL-GEAGGWRRRTRGVAR-SDRV 216
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
++V+N+PF A E+E LF G L + LP R VE++ +A+RA KA
Sbjct: 217 LVVKNLPFTASLEELEALFGTIGALGRLVLPPT-------RTLALVEYLEAQDARRAFKA 269
Query: 748 LC----QSTHLYGRRLVLEWA 764
L Q LY LEWA
Sbjct: 270 LAYKRYQHVPLY-----LEWA 285
>gi|116182074|ref|XP_001220886.1| hypothetical protein CHGG_01665 [Chaetomium globosum CBS 148.51]
gi|88185962|gb|EAQ93430.1| hypothetical protein CHGG_01665 [Chaetomium globosum CBS 148.51]
Length = 2009
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 188/342 (54%), Gaps = 40/342 (11%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
++AF + R ILVKN+ ++ +L+ LFE G + RVL+PP G +V+F Q
Sbjct: 488 IEAFKS--QQRGDTSILVKNIRNASI-EELRTLFEEHGAVLRVLMPPSGTIAIVQFAQPA 544
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AAF AY++FKE L+LE P+G+F +
Sbjct: 545 VCRAAFAKKAYSRFKESVLFLEKGPKGLFVD-------------------------HAAP 579
Query: 555 EEDNQQGV--PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
+D GV P V E +E D+ + +L+++NLNF++T + + FK S V
Sbjct: 580 PQDRPAGVQKPSVAELLERDDAEDQLETASLFVRNLNFSTTTEGLTSAFKPLDGFVSAKV 639
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
K DPK PGQ LSMG+GF F T+E ALKV+ LD H++ +K S+R ++
Sbjct: 640 KTKTDPKKPGQVLSMGFGFCAFKTKEQAQAALKVMDGYVLDAHKLLVKASHRGHDAAE-- 697
Query: 673 VKRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
+RK ++AK+ +KI+++N+PF+A + +V LF A+G+L +RLPKK + RG
Sbjct: 698 -ERKREDLAKKAAAQRTKIVIKNLPFEASKKDVRALFSAYGKLVALRLPKKF--NHTSRG 754
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVE 771
F F EF T EA A+ AL + THL GRRLVL++A EAD V+
Sbjct: 755 FAFAEFSTAKEALNALTAL-KDTHLLGRRLVLDFA-EADEVD 794
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 13/95 (13%)
Query: 322 SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFA 381
S ED + E ++ R+F+RNLSY V+EDD+ + F K+G L E ++KGFA
Sbjct: 314 SSEDVAKLVE---KTSRLFLRNLSYNVSEDDIREHFSKFGNL---------EEGQSKGFA 361
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
++ + P A A+Q DG+VF GR++H++P K
Sbjct: 362 MIRYEQPAAAVDAFQ-ADGSVFQGRIIHILPASAK 395
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 26/189 (13%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL-AEVILPIDKETDKTK-------GFA 381
AED E+ +FVRNL+++ T + LT F+ PL V + +TD K GF
Sbjct: 601 AEDQLETASLFVRNLNFSTTTEGLTSAFK---PLDGFVSAKVKTKTDPKKPGQVLSMGFG 657
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQV 441
F E A A + +DG V L + + H ERK + +
Sbjct: 658 FCAFKTKEQAQAALKVMDGYVLDAHKLLV----------KASHRGHDAAEERKREDLAKK 707
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP---YGITGLVEFLQKNQAKA 498
A+ +I+ +KNLP+ D++ALF +G L + +P + G F + + AK
Sbjct: 708 AAAQRTKIV-IKNLPFEASKKDVRALFSAYGKLVALRLPKKFNHTSRGFA-FAEFSTAKE 765
Query: 499 AFNSLAYTK 507
A N+L K
Sbjct: 766 ALNALTALK 774
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
I++ + + F +G VTDV+L RR F+GY + A A+ YFN +++ SR
Sbjct: 15 ISEAEFRKHFSAQGREVTDVKLIPN-----RRIGFVGYKSHEDAAKAVKYFNRSFIRMSR 69
Query: 88 IKVE 91
I V+
Sbjct: 70 IGVD 73
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 134/342 (39%), Gaps = 92/342 (26%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP-----EHATQ 393
I V+N+ E+ L LFE++G + V++P + A+V F P A +
Sbjct: 501 ILVKNIRNASIEE-LRTLFEEHGAVLRVLMP------PSGTIAIVQFAQPAVCRAAFAKK 553
Query: 394 AYQHL-DGTVFLGR------MLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARS 446
AY + +FL + + H P P++ V + ER DA +Q+ A
Sbjct: 554 AYSRFKESVLFLEKGPKGLFVDHAAP--PQDRPAGVQKPSVAELLERD-DAEDQLETAS- 609
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLVEFLQ 492
+ V+NL + T L + F+P G+VL +G F
Sbjct: 610 ---LFVRNLNFSTTTEGLTSAFKPLDGFVSAKVKTKTDPKKPGQVLSMGFGFCA---FKT 663
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEE-GEEEKKE 551
K QA+AA + +G +A K K G + EE K+E
Sbjct: 664 KEQAQAALKVM----------------DGYVLDAH-----KLLVKASHRGHDAAEERKRE 702
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
+ A++ Q T + IKNL F +++ +R F G + ++
Sbjct: 703 DLAKKAAAQ-------------------RTKIVIKNLPFEASKKDVRALFSAYGKLVALR 743
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYT-RESLNQALKVLQNSSL 652
+ +K + S G+ F +F T +E+LN AL L+++ L
Sbjct: 744 LPKKFN------HTSRGFAFAEFSTAKEALN-ALTALKDTHL 778
>gi|255726322|ref|XP_002548087.1| multiple RNA-binding domain-containing protein 1 [Candida
tropicalis MYA-3404]
gi|240134011|gb|EER33566.1| multiple RNA-binding domain-containing protein 1 [Candida
tropicalis MYA-3404]
Length = 846
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 134/349 (38%), Positives = 192/349 (55%), Gaps = 19/349 (5%)
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
E +V G V +R +D + R +IILVKN P+ T ++ LF +G L R+L
Sbjct: 464 EAHVIGDVRKYFEDRGVDLTTFDKKERDDKIILVKNFPFGTTIDEIGELFAAYGQLKRML 523
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN 538
+PP G +VEF A++AF LAY +FK LYLE P+ +F +E
Sbjct: 524 MPPAGTIAIVEFRDAPSARSAFTRLAYKRFKSTILYLEKGPKDLFT----------REPT 573
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEERE--PEPDTTLYIKNLNFNSTEDS 596
E EK+E TA E + E+ +V ED+ E P ++++KNLNF +T +
Sbjct: 574 TNEVVNVPAEKEEQTAVE-AKVSASEILGDVNEDDASEEIQGPTVSIFVKNLNFATTVQA 632
Query: 597 IRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQ 656
+ FK TV K DPK+ G+ LSMG+GFV+F T++ N A+ L LD H+
Sbjct: 633 LSDVFKGLPGFVVATVKTKPDPKNAGKTLSMGFGFVEFRTKDQANVAISTLDGHVLDGHK 692
Query: 657 IELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVR 716
++LK S++ TT SS + SKI+++N+PF+A + ++ ELF AFG+LK VR
Sbjct: 693 LQLKLSHKQ---GGTTSSSASSTKKSKKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVR 749
Query: 717 LPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE 765
+PKK S RGF FVEF EA+ AM L + HL GRRLV+++AE
Sbjct: 750 VPKKFDQSA--RGFAFVEFNLMKEAETAMNQL-EGVHLLGRRLVMQYAE 795
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I E+GR+F+RN+SY TE D LF YGPL EV + ID T K+KGF F+ A
Sbjct: 306 IEETGRLFIRNISYDATEKDFKDLFSGYGPLEEVHIAIDTRTGKSKGFVYAQFVKSSDAV 365
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN 418
+AY+ LD +F GR+LH++P K++
Sbjct: 366 RAYRSLDKQIFQGRLLHILPADKKKD 391
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
T+++L+ F ++G VTDV+L G+ RRFAFIGY + A+ A+ +FN ++V ++RI
Sbjct: 13 FTEDKLREHFSKQGDVTDVKLMKKRNGESRRFAFIGYKSAEAAERAVKFFNKSFVDTARI 72
Query: 89 KVEKCSNLGDTTKPKSW 105
V+ D T P S+
Sbjct: 73 DVDFAKTFSDPTVPISF 89
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 342 RNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQAYQHLDG 400
+NL + T DL +LF +G L V +P K+ D++ +GFA V F + + A A L+G
Sbjct: 724 KNLPFEATRKDLLELFGAFGQLKSVRVP--KKFDQSARGFAFVEFNLMKEAETAMNQLEG 781
Query: 401 TVFLGRMLHL 410
LGR L +
Sbjct: 782 VHLLGRRLVM 791
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 72/191 (37%), Gaps = 26/191 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVIL---PIDKETDKT--KGFALVTFLMPEHATQ 393
IFV+NL++ T L+ +F+ + P K KT GF V F + A
Sbjct: 619 IFVKNLNFATTVQALSDVFKGLPGFVVATVKTKPDPKNAGKTLSMGFGFVEFRTKDQANV 678
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A LDG V G L L K +G +++ I++K
Sbjct: 679 AISTLDGHVLDGHKLQL---KLSHKQGGTTSSSASSTK-----------KSKKSSKIIIK 724
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAYTK 507
NLP+ DL LF FG L V VP G VEF +A+ A N L
Sbjct: 725 NLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGF-AFVEFNLMKEAETAMNQLEGVH 783
Query: 508 FKEVPLYLEWA 518
L +++A
Sbjct: 784 LLGRRLVMQYA 794
>gi|320581887|gb|EFW96106.1| multiple RNA-binding domain-containing protein 1 [Ogataea
parapolymorpha DL-1]
Length = 824
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 198/370 (53%), Gaps = 28/370 (7%)
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
E +V G V ++ +D + + R ++ILVKN + T ++ LF +G L R+L
Sbjct: 456 EAHVIGDVRKYFEDKGVDLTSFNTKERDDKVILVKNFQHGTTKEEIGELFSAYGQLNRLL 515
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN 538
+PP G +VEF A+AAF+ LA+ + + LYLE P+ +F +
Sbjct: 516 MPPAGTIAIVEFRDAPAARAAFSKLAFRRLGKSILYLEKGPKNLFTK------------- 562
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIR 598
E E+ E+ ++ +++ E+ + E++ P ++++KNLNF++T + +
Sbjct: 563 -----EASTEELESVSKTESKADTTEIMDIDNEEDVEISGPTVSVFVKNLNFSTTTNELT 617
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
FK V + DPK G+ SMG+GFV+F T+E A+K++ LD HQ++
Sbjct: 618 ATFKSLPGFVVAVVRTRPDPKRTGKTQSMGFGFVEFKTKEQAENAIKIMNGHLLDGHQLQ 677
Query: 659 LKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP 718
LK SNR + ++ T K + KI+V+N+ F++ ++++ ELF FG LK VR+P
Sbjct: 678 LKLSNRVSQGKSDTASAKKG----KKSPKIIVKNLAFESTRNDIFELFSPFGNLKSVRVP 733
Query: 719 KKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW--AEEADNVEDIRKR 776
KK S RGF FVEF T EA+ AM L Q HL GRRLV+++ AE D E+I +
Sbjct: 734 KKFDKSA--RGFAFVEFSTLKEAESAMDQL-QGVHLLGRRLVMDFADAESKDVEEEIERM 790
Query: 777 TNRY-FGTAV 785
T + F T V
Sbjct: 791 TKKAKFQTGV 800
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 308 NNASMENI--KAKHWKSQEDSVQFAED------IAESGRIFVRNLSYTVTEDDLTKLFEK 359
N+ +E + A+H E+ Q E I+++GR+F+RN+ Y+ TEDD +LF
Sbjct: 265 NDIQIEQVGQSAQHQSDDEEEPQLNEQDKAIQRISQTGRLFLRNILYSATEDDFRELFGT 324
Query: 360 YGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
YG L EV + +D T +KGFA V F + A +AY LD +F GR+LH++P + K++
Sbjct: 325 YGSLDEVHIAVDTRTGNSKGFAYVKFTSADDAVKAYLELDKQIFQGRLLHILPAEAKKDH 384
Query: 420 GNVD 423
D
Sbjct: 385 TLTD 388
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+++LK F++KG VTDV+L +G+ RRFAFIGY + A+ A+ YF+ T++ ++RI
Sbjct: 14 TEDKLKTHFQKKGVVTDVKLVRNRQGESRRFAFIGYRSQQDAENAVKYFDKTFIDTARIS 73
Query: 90 VEKCSNLGDTTKPKSW 105
V+ D T P W
Sbjct: 74 VQPAKTFSDPTVPLPW 89
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 42/200 (21%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
++ VKNL +L A FK LP +A VRT +G ++ FK ++
Sbjct: 601 SVFVKNLNFSTTTNELTATFKSLPGFVVAVVRTRPDPKRTGKTQSMGFGFVEFKTKEQAE 660
Query: 273 KALN-KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE 331
A+ N G QL + ++ + K A+ AK K
Sbjct: 661 NAIKIMNGHLLDGHQLQLKLSNRVSQGKSDTAS------------AKKGK---------- 698
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEH 390
+S +I V+NL++ T +D+ +LF +G L V +P K+ DK+ +GFA V F +
Sbjct: 699 ---KSPKIIVKNLAFESTRNDIFELFSPFGNLKSVRVP--KKFDKSARGFAFVEFSTLKE 753
Query: 391 ATQAYQHLDGTVFLGRMLHL 410
A A L G LGR L +
Sbjct: 754 AESAMDQLQGVHLLGRRLVM 773
>gi|327298413|ref|XP_003233900.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
gi|326464078|gb|EGD89531.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
Length = 798
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 184/334 (55%), Gaps = 33/334 (9%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R +L+KN Y D++ L EPFG L R+L+PP G +VEF ++ AF LA
Sbjct: 455 RGNTALLLKNFTYGVSSEDIRKLCEPFGQLTRLLMPPSGTIAIVEFAMPDETLRAFKGLA 514
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + + LY+E AP+ +F E G + NQ+ V +
Sbjct: 515 YKRIGDSILYVEKAPKNLF-------------------EGGPPVTMPSLL---NQKVVSQ 552
Query: 565 ---VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
+ + DE P TL+++NLNF +T+ + F+ S V + DPK P
Sbjct: 553 GFSTSDTFKADEPEAPMESATLFVRNLNFVTTDAGLSDLFRPLDGFISAQVKTRPDPKKP 612
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
G+ LSMG+GFV+F +R ALK L LD+H++ +K S++ + +A+ +R+ N
Sbjct: 613 GERLSMGFGFVEFKSRAQAEAALKALNGYKLDQHELVIKPSHKGM--DASEQRRREDNAK 670
Query: 682 KQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
K + +KI+++N+PFQA + ++ LF A+G+L+ VR+PKK + RGF F +F++
Sbjct: 671 KASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTA--RGFAFADFVSSR 728
Query: 740 EAKRAMKALCQSTHLYGRRLVLEW-AEEADNVED 772
EA+ AM AL ++THL GRRLVLE+ +EEA + ED
Sbjct: 729 EAENAMDAL-RNTHLLGRRLVLEFVSEEATDPED 761
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I +GR+F+RNL Y +EDDL F ++G + E + D +KGFA + ++ +
Sbjct: 269 ESIRLTGRLFIRNLPYNASEDDLNATFSRFGKIEETHVATDTRHSTSKGFAYIQYVESDA 328
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A +AY+ LDG F GR++H++P K
Sbjct: 329 AIEAYKQLDGKDFQGRLMHILPASSK 354
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 81/199 (40%), Gaps = 36/199 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
T+ V+NL L F+PL A V+T +G ++ FK
Sbjct: 573 TLFVRNLNFVTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAE 632
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
AL K LN YK + S + + A + +ED+ + A
Sbjct: 633 AAL---------KALNGYKLDQHELVI---------KPSHKGMDASEQRRREDNAKKAS- 673
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
A+ +I ++NL + T+ D+ LF YG L V +P K+ D+T +GFA F+ A
Sbjct: 674 -AKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVP--KKFDRTARGFAFADFVSSREA 730
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A L T LGR L L
Sbjct: 731 ENAMDALRNTHLLGRRLVL 749
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 21/196 (10%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPE 389
ES +FVRNL++ T+ L+ LF + + K + GF V F
Sbjct: 570 ESATLFVRNLNFVTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVEFKSRA 629
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A A + L+G L + P ++G + R+ D + R+K
Sbjct: 630 QAEAALKALNGYKLDQHELVIKPS----HKG-----MDASEQRRREDNAKKASAKRTK-- 678
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT----GLVEFLQKNQAKAAFNSLA 504
I++KNLP++ D+ +LF +G L V VP + T +F+ +A+ A ++L
Sbjct: 679 IIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTARGFAFADFVSSREAENAMDALR 738
Query: 505 YTKFKEVPLYLEWAPE 520
T L LE+ E
Sbjct: 739 NTHLLGRRLVLEFVSE 754
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T ++L+ F ++ VTD + RR F+G+ D A+ A+ YFN T++ S+I
Sbjct: 15 LTSDKLRHHFAQRFEVTDAHVIPN-----RRIGFVGFKGPDLAEIAVKYFNKTFINMSKI 69
Query: 89 KVEKC 93
VE
Sbjct: 70 SVEMA 74
>gi|308802782|ref|XP_003078704.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116057157|emb|CAL51584.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 907
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 198/346 (57%), Gaps = 25/346 (7%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS ++L+KNLPY +LK + E +G L R ++P +VEFL+ +A+ AF SLA
Sbjct: 564 RSNCVLLLKNLPYEADEDELKEMCEKYGGLARFILPDTHTIAVVEFLEAAEARRAFTSLA 623
Query: 505 YTKFKEVPLYLEWAPEGVFAE-AKEKSKG-KEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
Y +++ VPLY+EWAP+ +FA +K KG K E E + + +++ A+ D +
Sbjct: 624 YKRYRHVPLYVEWAPDDIFAATSKVDIKGAKALAVAEAESDLAQAAREKTKAKVDATSDL 683
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHF-----KKCGPIASVTVARKKD 617
N + ++++K L+F +TE+ +R HF + G + SV + +
Sbjct: 684 AGKSSN---------DDALSIFVKGLDFGTTENKLRSHFLVAAQRVSGRVVSVRIVTHRG 734
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
P G+ LS G+GFV+ + + L LQ SSLD ++L+ S++ E ++S
Sbjct: 735 P--GGKTLSRGFGFVELDSHRTAKSVLNALQGSSLDGKTLKLELSSQGSGREDDG--KES 790
Query: 678 SNVAKQ-TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
S V + +K+++RN+ F+A + ++++LF FG+LK VRLPKK G HRGF FVEF
Sbjct: 791 SKVPTGFSATKLVIRNVAFEATKRDIQKLFNPFGQLKQVRLPKKF--DGAHRGFAFVEFN 848
Query: 737 TKNEAKRAMKALCQSTHLYGRRLVLE-WAEEADNVEDIRKRTNRYF 781
T E + AM AL + THLYGR +VLE A++ D+VE IRK+T F
Sbjct: 849 TARETQAAMDAL-KGTHLYGRHVVLERAADDDDDVEVIRKKTTSKF 893
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 76/111 (68%)
Query: 304 ADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL 363
++ N E++K K+++ + E ++E+GRIFVRNL YT TE+++ +LFE++G L
Sbjct: 329 GEEANEEKSEDVKEVEPKTKDVNAADMEALSETGRIFVRNLPYTATEEEVAELFEQFGKL 388
Query: 364 AEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGK 414
+ V + +D+ T ++KG A VTF +PE +A + +DG++F GR++HL+P K
Sbjct: 389 SAVHILVDRSTKRSKGLAYVTFAIPEDGVKAMEAVDGSIFQGRLIHLLPAK 439
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 71/241 (29%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++L+ F +G VTDV++ T +G R+ AF+GY E A A+ YF+ T++ +SRI
Sbjct: 44 VKEQRLREHFASQGEVTDVKVVRTADGTSRQMAFVGYKTEKAATRAMKYFDKTFIDTSRI 103
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLH-NIAP--------------------KQDL 127
+V ++ P+ WSKY+ SSA +++ AP KQ L
Sbjct: 104 EVTYARSVHSAQIPRPWSKYSAGSSANKEVEKKKAPAKEEEEGERWIGAREAKKLAKQKL 163
Query: 128 KPEHTKDSKPGKKSKNDPTFSDFLQL---------------------HGKDVSKLL---- 162
+ ++ K + K DP F +F+QL KD K+L
Sbjct: 164 REKYDPKYKAQQMMKEDPKFREFMQLMMPQKSKFWSDGFFEDMDTLEQYKDSEKVLREDG 223
Query: 163 -------PLSNKDGEEKEEENEDESNNQ-----------------IAHAD-ISDMEYLKL 197
+ DG+ K +E E S+ + +AH D +SDM+Y KL
Sbjct: 224 DAGSSDDEYQDMDGDSKGKERESGSDGEESASDLESDDEESDEDDVAHDDKVSDMDYFKL 283
Query: 198 K 198
K
Sbjct: 284 K 284
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 132/362 (36%), Gaps = 95/362 (26%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ ++NL Y ED+L ++ EKYG LA ILP T A+V FL A +A+ L
Sbjct: 569 LLLKNLPYEADEDELKEMCEKYGGLARFILP------DTHTIAVVEFLEAAEARRAFTSL 622
Query: 399 DGTVFLGRMLHL---IPGKPKE-----NEGNVDGKVHCCISERKLDAFNQVVEARSKRI- 449
R H+ + P + ++ ++ G ++E + D E ++
Sbjct: 623 ----AYKRYRHVPLYVEWAPDDIFAATSKVDIKGAKALAVAEAESDLAQAAREKTKAKVD 678
Query: 450 ----------------ILVKNLPYRTLPTDLKALFEPFGDL--GRVLV-------PPYGI 484
I VK L + T L++ F GRV+ P G
Sbjct: 679 ATSDLAGKSSNDDALSIFVKGLDFGTTENKLRSHFLVAAQRVSGRVVSVRIVTHRGPGGK 738
Query: 485 T-----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNE 539
T G VE AK+ N+L + L LE + +G G+E
Sbjct: 739 TLSRGFGFVELDSHRTAKSVLNALQGSSLDGKTLKLELSSQG---------SGRE----- 784
Query: 540 EEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRR 599
++G+E K T T L I+N+ F +T+ I++
Sbjct: 785 ---DDGKESSKVPTG-----------------------FSATKLVIRNVAFEATKRDIQK 818
Query: 600 HFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
F G + V + +K D G+ FV+F T A+ L+ + L + L
Sbjct: 819 LFNPFGQLKQVRLPKKFDG------AHRGFAFVEFNTARETQAAMDALKGTHLYGRHVVL 872
Query: 660 KR 661
+R
Sbjct: 873 ER 874
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQAYQ 396
++ +RN+++ T+ D+ KLF +G L +V LP K+ D +GFA V F A
Sbjct: 801 KLVIRNVAFEATKRDIQKLFNPFGQLKQVRLP--KKFDGAHRGFAFVEFNTARETQAAMD 858
Query: 397 HLDGTVFLGRMLHL 410
L GT GR + L
Sbjct: 859 ALKGTHLYGRHVVL 872
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR--GFGFVEFITKNE 740
+TG +I VRN+P+ A + EV ELF+ FG+L V + +V R G +V F +
Sbjct: 360 ETG-RIFVRNLPYTATEEEVAELFEQFGKLSAVHI---LVDRSTKRSKGLAYVTFAIPED 415
Query: 741 AKRAMKALCQSTHLYGRRLV 760
+AM+A+ S ++ RL+
Sbjct: 416 GVKAMEAVDGS--IFQGRLI 433
>gi|302660785|ref|XP_003022068.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
gi|291185995|gb|EFE41450.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
Length = 968
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 189/344 (54%), Gaps = 35/344 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
+++F Q R +L+KN Y D++ L EPFG L R+L+PP G +VEF +
Sbjct: 617 IESFKQ--RERGNTALLLKNFTYGVSSEDIRKLCEPFGQLTRLLMPPSGTIAIVEFAMPD 674
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A AF LAY + + LY+E AP+ +F E G +
Sbjct: 675 EALRAFKGLAYKRIGDSILYVEKAPKNLF-------------------EGGPPVTMPSLL 715
Query: 555 EEDNQQGVPE---VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
NQ+ V + + + DE P TL+++NLNF +T+ + F+ S
Sbjct: 716 ---NQKVVSQGFSTSDTFKADEPEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFISAQ 772
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
V + DPK PG+ LSMG+GFV+F +R ALK L LD+H++ +K S++ + +A
Sbjct: 773 VKTRPDPKKPGERLSMGFGFVEFKSRAQAEAALKALNGYKLDQHELVIKPSHKGM--DAA 830
Query: 672 TVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
+R+ N K + +KI+++N+PFQA + ++ LF A+G+L+ VR+PKK + RG
Sbjct: 831 EQRRREDNAKKASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTA--RG 888
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW-AEEADNVED 772
F F +F++ EA+ AM AL ++THL GRRLVLE+ +EEA + ED
Sbjct: 889 FAFADFVSSREAENAMDAL-RNTHLLGRRLVLEFVSEEATDPED 931
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE------------VILPIDKETDKTK 378
E I +GR+F+RNL Y +EDDL F ++G + E + + + K
Sbjct: 427 ESIRLTGRLFIRNLPYNASEDDLNATFSRFGKIEEEEYFSRCLFNLMTVSFLIAAINYCK 486
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
GFA + ++ + A +AY+ LDG F GR++H++P K+
Sbjct: 487 GFAYIQYVESDAAIEAYKQLDGKDFQGRLMHILPASSKKT 526
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 81/199 (40%), Gaps = 36/199 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
T+ V+NL L F+PL A V+T +G ++ FK
Sbjct: 743 TLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAE 802
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
AL K LN YK + S + + A + +ED+ + A
Sbjct: 803 AAL---------KALNGYKLDQHELVI---------KPSHKGMDAAEQRRREDNAKKAS- 843
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
A+ +I ++NL + T+ D+ LF YG L V +P K+ D+T +GFA F+ A
Sbjct: 844 -AKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVP--KKFDRTARGFAFADFVSSREA 900
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A L T LGR L L
Sbjct: 901 ENAMDALRNTHLLGRRLVL 919
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPE 389
ES +FVRNL++ T+ L+ LF + + K + GF V F
Sbjct: 740 ESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVEFKSRA 799
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A A + L+G L + P ++G + R+ D + R+K
Sbjct: 800 QAEAALKALNGYKLDQHELVIKPS----HKG-----MDAAEQRRREDNAKKASAKRTK-- 848
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSL 503
I++KNLP++ D+ +LF +G L V VP G +F+ +A+ A ++L
Sbjct: 849 IIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTARGF-AFADFVSSREAENAMDAL 907
Query: 504 AYTKFKEVPLYLEWAPE 520
T L LE+ E
Sbjct: 908 RNTHLLGRRLVLEFVSE 924
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T ++L+ F ++ VTD + RR F+G+ D A+ A+ YFN T++ S+I
Sbjct: 157 LTSDKLRNHFAQRFEVTDAHVIPN-----RRIGFVGFKGPDLAENAVKYFNKTFINMSKI 211
Query: 89 KVE 91
VE
Sbjct: 212 SVE 214
>gi|315041593|ref|XP_003170173.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
gi|311345207|gb|EFR04410.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
Length = 799
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 180/331 (54%), Gaps = 27/331 (8%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R +L+KN Y D++ L EPFG L ++L+PP G +VEF ++A AF LA
Sbjct: 456 RGNTALLLKNFTYGVSSEDIRKLCEPFGQLTQLLMPPSGTIAIVEFAMPDEALRAFKGLA 515
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + + LY+E AP+ +F E G + +
Sbjct: 516 YKRLGDSILYVEKAPKNLF-------------------EGGPTVTMPSLLTQKVVSQGFS 556
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
+ + DE P TL+++NLNF +T+ + F+ S V + DPK PG+
Sbjct: 557 TSDTFKADEPEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGER 616
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
LSMG+GFV+F +R ALK L LD+H++ +K S++ + +A +RK N K +
Sbjct: 617 LSMGFGFVEFKSRAQAEAALKALNGYKLDQHELVIKPSHKGM--DAAEQRRKEDNAKKAS 674
Query: 685 G--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+KI+++N+PFQA + ++ LF A+G+L+ VR+PKK + RGF F +F++ EA+
Sbjct: 675 AKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDHTA--RGFAFADFVSSREAE 732
Query: 743 RAMKALCQSTHLYGRRLVLEW-AEEADNVED 772
AM AL ++THL GRRLVLE+ +EEA + ED
Sbjct: 733 NAMDAL-RNTHLLGRRLVLEFVSEEATDPED 762
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I +GR+F+RNL Y +EDDL+ F ++G + E + D +KGFA + ++ +
Sbjct: 270 ESIRLTGRLFIRNLPYNASEDDLSATFSRFGKIEETHVATDTRHSTSKGFAYIQYVESDA 329
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A +AY+ LDG F GR++H++P K
Sbjct: 330 AIEAYKQLDGKDFQGRLMHILPASSK 355
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 80/199 (40%), Gaps = 36/199 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
T+ V+NL L F+PL A V+T +G ++ FK
Sbjct: 574 TLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAE 633
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
AL K LN YK + S + + A + +ED+ + A
Sbjct: 634 AAL---------KALNGYKLDQHELVI---------KPSHKGMDAAEQRRKEDNAKKAS- 674
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
A+ +I ++NL + T+ D+ LF YG L V +P K+ D T +GFA F+ A
Sbjct: 675 -AKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVP--KKFDHTARGFAFADFVSSREA 731
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A L T LGR L L
Sbjct: 732 ENAMDALRNTHLLGRRLVL 750
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 21/196 (10%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPE 389
ES +FVRNL++ T+ L+ LF + + K + GF V F
Sbjct: 571 ESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGFGFVEFKSRA 630
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A A + L+G L + P ++G + RK D + R+K
Sbjct: 631 QAEAALKALNGYKLDQHELVIKPS----HKG-----MDAAEQRRKEDNAKKASAKRTK-- 679
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP---PYGITG--LVEFLQKNQAKAAFNSLA 504
I++KNLP++ D+ +LF +G L V VP + G +F+ +A+ A ++L
Sbjct: 680 IIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDHTARGFAFADFVSSREAENAMDALR 739
Query: 505 YTKFKEVPLYLEWAPE 520
T L LE+ E
Sbjct: 740 NTHLLGRRLVLEFVSE 755
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T ++L+ F ++ VTD + RR F+G+ D A+ A+ YFN +++ S+I
Sbjct: 15 LTSDKLRNHFAQRFEVTDAHVIPN-----RRIGFVGFKGPDLAENAVKYFNKSFINMSKI 69
Query: 89 KVEKC 93
VE
Sbjct: 70 SVEMA 74
>gi|350296911|gb|EGZ77888.1| multiple RNA-binding domain-containing protein 1 [Neurospora
tetrasperma FGSC 2509]
Length = 826
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 181/338 (53%), Gaps = 36/338 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
++AF + R ILVKN+ T+ +++ LFE G + RVL+PP G +V+F Q
Sbjct: 477 IEAFK--TQQRGDTTILVKNIKNATI-EEMRTLFEEHGTVLRVLMPPSGTIAIVQFAQPV 533
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
Q + AF AY++FK+ L+LE P+G+F + N A
Sbjct: 534 QCRTAFARKAYSRFKDSVLFLEKGPKGLFTD--------------------------NVA 567
Query: 555 EEDNQQ--GV--PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
+ + GV P V + +E D+ E ++L+++NLNF++T + FK
Sbjct: 568 VPTDARPAGVQKPSVADLLERDDAEEQLETSSLFVRNLNFSTTSQGLTDAFKHLDGFVQA 627
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK PGQ LSMG+GFV F T++ ALKV+ LD H+I +K S+R L++
Sbjct: 628 KVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQAALKVMDGQVLDVHKISVKASHRGLDAAE 687
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
+ + A G+K++V+N+PF+ + EV LF +G+L +R+PKK S RGF
Sbjct: 688 ERRREDMAKKAANQGTKLVVKNLPFEVTKKEVRTLFSTYGKLVALRIPKKFNQSS--RGF 745
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
F EF T EA A +L + TH+ GRRLV+++A+ D
Sbjct: 746 AFAEFSTAKEALNAFNSL-KDTHILGRRLVIDFAQAED 782
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 175/422 (41%), Gaps = 87/422 (20%)
Query: 29 ITQEQLKAKFEEKG-TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT+ + + F +G VTDV+L R F+GY + A A+ YFN +++ SR
Sbjct: 16 ITEAEFRKHFSAEGRQVTDVKLIPA-----RHIGFVGYKSAEDAARAVKYFNRSFIRMSR 70
Query: 88 IKVEKCSNLGDT--------------TKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTK 133
I V+ + D+ PK+ K P ++ PK + P+ K
Sbjct: 71 ISVDIAKPIADSKPQHKLASKGPSKDADPKNAPKVVPPNTKVTAA--AVPKVEAAPDAPK 128
Query: 134 DSKPGKKSKNDPTFSDFLQLHGKDVSK------------------LLPLSNKDGEEKEEE 175
K + DP ++L + G SK +P +DGE +E
Sbjct: 129 -RKLDVLDEADPKLQEYLDVMGAHPSKKMRNAEGLPTTVDEVLAPAVPAGLEDGESDDEY 187
Query: 176 NEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVS-KAPVHKRQYHTIVVKNLPA 234
+ S +H +M L ++ PS+ S PPVS A H + L
Sbjct: 188 EDIPSRTHQSHTADQEMVETPLAASAE---PSE-SAPPVSLDATDH--DWLRSRTNRLLD 241
Query: 235 GVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSK 294
V +D + +P A V +++ S
Sbjct: 242 LVDPEDAASALRPAASAPV--------------------------------AVSVPSTSV 269
Query: 295 DNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLT 354
+N+A S A++ + + A E ++ E ++ R+F+RNLSYTVTEDD+
Sbjct: 270 ENTA--SAKAEEQSAEDSREMAATSTHDTESAISLIE---KTSRLFLRNLSYTVTEDDVR 324
Query: 355 KLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGK 414
+ F K+G L EV +P+D + +KGFA++ + P A A+Q DGTVF GR++H++P
Sbjct: 325 EHFAKFGTLEEVHVPLDGK-GHSKGFAMIRYENPASALAAFQ-TDGTVFQGRIVHILPAA 382
Query: 415 PK 416
K
Sbjct: 383 AK 384
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 33/223 (14%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-------GFAL 382
AE+ E+ +FVRNL+++ T LT F+ + + +TD K GF
Sbjct: 591 AEEQLETSSLFVRNLNFSTTSQGLTDAFKHLDGFVQA--KVKTKTDPKKPGQVLSMGFGF 648
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
V F + A A + +DG V +H I K + R+ D +
Sbjct: 649 VAFRTKDQAQAALKVMDGQVL---DVHKISVKASHR------GLDAAEERRREDMAKKAA 699
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQA 496
+K ++VKNLP+ +++ LF +G L + +P G EF +A
Sbjct: 700 NQGTK--LVVKNLPFEVTKKEVRTLFSTYGKLVALRIPKKFNQSSRGF-AFAEFSTAKEA 756
Query: 497 KAAFNSLAYTKFKEVPLYLEWA------PEGVFAEAKEKSKGK 533
AFNSL T L +++A PE A ++K++ +
Sbjct: 757 LNAFNSLKDTHILGRRLVIDFAQAEDIDPEDQIAAMEKKTRAQ 799
>gi|403368470|gb|EJY84070.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 804
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 196/336 (58%), Gaps = 48/336 (14%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS +I+VKN+PY T D++ +FE +G L R+L+ P+ LVE+ + QAK A +L
Sbjct: 475 RSHTVIIVKNIPYHTKEQDIREVFERYGVLKRLLLSPFNTLALVEYDNEKQAKTAMKNLQ 534
Query: 505 YTKFKEV-PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
K + P+YLE+AP + +++ +K EK+ E+E EE +++ E+++Q+G
Sbjct: 535 NHKINYIMPIYLEYAP-VIISKSAALTKEDEKKVQEKEVEEQKQQ------EDNDQKG-- 585
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK--KCGPIASVTVARKKDPKSP 621
+ T+++KNLNF++ E+ + + FK K G I S + + + +
Sbjct: 586 ----------------ERTIFVKNLNFSTVEEQLEQVFKEAKVGKILSCKIVKNNENQ-- 627
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNL------ESEATTVKR 675
LS GYGFV+ ++E +A+K LQN LDEH ++L S +++ ++ KR
Sbjct: 628 ---LSRGYGFVELESKEMAEKAIKKLQNFILDEHALKLSISKKDVTKAEKKSNDDQLGKR 684
Query: 676 KS----SNVAKQ---TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 728
K S V Q +K+LV+N+ F+A S+++ELFK +G LK RLPKK + S HR
Sbjct: 685 KEKTELSKVEAQEDLQSNKLLVKNLAFEATDSDIKELFKTYGALKKCRLPKK-INSKSHR 743
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
GFGFVEF++ EAK A K L Q THLYGR++++EWA
Sbjct: 744 GFGFVEFVSSEEAKNAFKML-QHTHLYGRKIIIEWA 778
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 28/318 (8%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS--VRTTFLGMAYIGFKDEKNCNKALNKN 278
KR + I+VKN+P K++D++ F+ + + + F +A + + +EK A+
Sbjct: 474 KRSHTVIIVKNIPYHTKEQDIREVFERYGVLKRLLLSPFNTLALVEYDNEKQAKTAMKNL 533
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
++ + IY S A + ++ + + K QED+ Q E
Sbjct: 534 QNHKINYIMPIYLEYAPVIISKSAALTKEDEKKVQEKEVEEQKQQEDNDQKGERT----- 588
Query: 339 IFVRNLSYTVTEDDLTKLFE--KYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
IFV+NL+++ E+ L ++F+ K G + + + E ++G+ V E A +A +
Sbjct: 589 IFVKNLNFSTVEEQLEQVFKEAKVGKILSCKIVKNNENQLSRGYGFVELESKEMAEKAIK 648
Query: 397 HLDGTVFLGRMLHLIPGKPK----ENEGNVDGKVHCCISERKLDAFNQVVEAR---SKRI 449
L + L L K E + N D + +RK VEA+
Sbjct: 649 KLQNFILDEHALKLSISKKDVTKAEKKSNDDQ-----LGKRKEKTELSKVEAQEDLQSNK 703
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSL 503
+LVKNL + +D+K LF+ +G L + +P + G VEF+ +AK AF L
Sbjct: 704 LLVKNLAFEATDSDIKELFKTYGALKKCRLPKKINSKSHRGFGFVEFVSSEEAKNAFKML 763
Query: 504 AYTKFKEVPLYLEWA-PE 520
+T + +EWA PE
Sbjct: 764 QHTHLYGRKIIIEWAKPE 781
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 323 QEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFAL 382
QE+ + ++I + RI+V NL++T+ ++L + F +G +A++ +P+ K ++ GFA
Sbjct: 235 QEEKNEEDDNIIDEQRIYVMNLAFTINHEELREKFGPFGEIADIEIPLRK-GGQSFGFAF 293
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
+ + E A AY LD T + GR LH++P + K
Sbjct: 294 IKYATVEAAVSAYAELDKTFYQGRKLHILPAQKK 327
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----------GMAYIGFKDEKNCNKAL 275
TI VKNL ++ L+ FK + + + + G ++ + ++ KA+
Sbjct: 588 TIFVKNLNFSTVEEQLEQVFKEAKVGKILSCKIVKNNENQLSRGYGFVELESKEMAEKAI 647
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
K ++F + SK + K ++D+ + + K++ V+ ED+ +
Sbjct: 648 KKLQNFILDEHALKLSISKKDVTKAEKKSNDDQ------LGKRKEKTELSKVEAQEDL-Q 700
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ V+NL++ T+ D+ +LF+ YG L + LP + +GF V F+ E A A+
Sbjct: 701 SNKLLVKNLAFEATDSDIKELFKTYGALKKCRLPKKINSKSHRGFGFVEFVSSEEAKNAF 760
Query: 396 QHLDGTVFLGRMLHLIPGKPK----ENEGNVD 423
+ L T GR + + KP+ NE NVD
Sbjct: 761 KMLQHTHLYGRKIIIEWAKPEVDMGGNENNVD 792
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 29 ITQEQLKAKFE-EKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
+ +++L+ F+ E G VTD ++ K R FAF+G+ E++A+ A YFNN+Y+ +S+
Sbjct: 43 LDEQRLRLHFQKEGGHVTDAKI-MKKGNKSRLFAFVGFKSEEEAEKAKKYFNNSYIDTSK 101
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAY 115
++VE D + WS+Y+ SSA+
Sbjct: 102 VQVEFALAQNDPKLSRPWSRYSKGSSAF 129
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 141/327 (43%), Gaps = 40/327 (12%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSL 503
I V NL + +L+ F PFG++ + +P +G +++ A +A+ L
Sbjct: 251 IYVMNLAFTINHEELREKFGPFGEIADIEIPLRKGGQSFGF-AFIKYATVEAAVSAYAEL 309
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQ---- 559
T ++ L++ A + E + + KE ++ + + +EG+ E KE+ ++ Q
Sbjct: 310 DKTFYQGRKLHILPAQKKPPKEIPDFNPTKEGDE-QNQSQEGDVEMKESNQNQEEQKQPE 368
Query: 560 QGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
Q PE +E + E + E +N +D ++ A T K
Sbjct: 369 QKQPEQKEKIREKKSTFKEEKEKEVKENF-----DDETNWNYLFMNQDAVATSMASKLNI 423
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE--LKRSNRNLESEATTVKRKS 677
S G L R+ N A++V + ++ +Q + +K + +L+ T + K
Sbjct: 424 SKGSLLD----------RDQKNLAVRVAKAETIIINQTKEWMKENGIDLDRLERTDRLK- 472
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
K++ + I+V+NIP+ K+ ++ E+F+ +G LK + L VE+
Sbjct: 473 ---CKRSHTVIIVKNIPYHTKEQDIREVFERYGVLKRLLLSP-------FNTLALVEYDN 522
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWA 764
+ +AK AMK L Y + LE+A
Sbjct: 523 EKQAKTAMKNLQNHKINYIMPIYLEYA 549
>gi|425772895|gb|EKV11275.1| hypothetical protein PDIG_51110 [Penicillium digitatum PHI26]
gi|425782122|gb|EKV20050.1| hypothetical protein PDIP_20330 [Penicillium digitatum Pd1]
Length = 835
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 191/352 (54%), Gaps = 32/352 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
+DAF + R ILVKN Y +L+ LF+P+G + R+L+PP G +VEF Q +
Sbjct: 484 IDAFKE--RERGNTAILVKNFSYGVTSAELRGLFDPYGKIIRLLMPPSGTIAIVEFAQPD 541
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY K + L+LE AP+ +F + S E G++
Sbjct: 542 EAQKAFKGLAYRKMGDSILFLEKAPKNLF----DGSAVPRALAPETRGKD---------- 587
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
QG + DE + TTL++KNLNF++T + F+ + +
Sbjct: 588 -----QGF-STADTFAADEPDDSVATTTLFVKNLNFSTTNEKFLEVFRSLDGFITGRIKT 641
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+ F F T+ AL + LD+H++ ++ S++ ++ +
Sbjct: 642 KPDPKRPGQTLSMGFAFADFKTKAQAQAALSAMNGYKLDQHELLIRASHKGKDAAE---E 698
Query: 675 RKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
R+ + AK+ +KI+++N+PFQA + ++ LF A+G+L+ VR+P+K + RGFG
Sbjct: 699 RRREDTAKKVAARRTKIIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQKFDHTA--RGFG 756
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA-EEADNVEDIRKRTNRYFG 782
F +F++ EA+ AM AL ++THL GRRLVLE+ EEA + E+ R + G
Sbjct: 757 FADFVSAREAENAMDAL-KNTHLLGRRLVLEFVNEEAVDPEEELARLEKKVG 807
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I S R+F+RNL+Y TE DL +FE++G + E+ + D + +KGFA V + + + A
Sbjct: 308 IRNSARLFLRNLAYDTTESDLQPIFERFGNIEEIHIAFDTRSTTSKGFAYVQYSLADAAI 367
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPK 416
AY++LDG F GR+LH++P K
Sbjct: 368 DAYRNLDGKHFQGRLLHILPASAK 391
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 133/334 (39%), Gaps = 72/334 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N SY VT +L LF+ YG + +++P + A+V F P+ A +A++ L
Sbjct: 497 ILVKNFSYGVTSAELRGLFDPYGKIIRLLMP------PSGTIAIVEFAQPDEAQKAFKGL 550
Query: 399 ------DGTVFLGRM-LHLIPGK--PKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
D +FL + +L G P+ GK S A ++ ++ +
Sbjct: 551 AYRKMGDSILFLEKAPKNLFDGSAVPRALAPETRGKDQ-GFSTADTFAADEPDDSVATTT 609
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPY----GIT-----GLVEFLQKNQAKA 498
+ VKNL + T +F GR+ P G T +F K QA+A
Sbjct: 610 LFVKNLNFSTTNEKFLEVFRSLDGFITGRIKTKPDPKRPGQTLSMGFAFADFKTKAQAQA 669
Query: 499 AFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDN 558
A +++ K + L + + KGK+ EE ++E+TA++
Sbjct: 670 ALSAMNGYKLDQHELLI-----------RASHKGKDA---------AEERRREDTAKKVA 709
Query: 559 QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
+ T + IKNL F +T+ IR F G + SV V +K D
Sbjct: 710 AR-------------------RTKIIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQKFD- 749
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+ G+GF F + A+ L+N+ L
Sbjct: 750 -----HTARGFGFADFVSAREAENAMDALKNTHL 778
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 246 KPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAAD 305
KP P +T +G A+ FK + AL S G +L+ ++ S K AA+
Sbjct: 642 KPDPKRPGQTLSMGFAFADFKTKAQAQAAL----SAMNGYKLDQHELLIRASHKGKDAAE 697
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
+ + +ED+ + + A +I ++NL + T+ D+ LF YG L
Sbjct: 698 E--------------RRREDTAK--KVAARRTKIIIKNLPFQATKKDIRSLFGAYGQLRS 741
Query: 366 VILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
V +P K +GF F+ A A L T LGR L L
Sbjct: 742 VRVP-QKFDHTARGFGFADFVSAREAENAMDALKNTHLLGRRLVL 785
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 23/201 (11%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL---PIDKETDKT--KGFALVTF 385
+D + +FV+NL+++ T + ++F + P K +T GFA F
Sbjct: 602 DDSVATTTLFVKNLNFSTTNEKFLEVFRSLDGFITGRIKTKPDPKRPGQTLSMGFAFADF 661
Query: 386 LMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
A A ++G L LI K GK R+ D +V R
Sbjct: 662 KTKAQAQAALSAMNGYKLDQHEL-LIRASHK-------GK-DAAEERRREDTAKKVAARR 712
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAA 499
+K I++KNLP++ D+++LF +G L V VP G G +F+ +A+ A
Sbjct: 713 TK--IIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQKFDHTARGF-GFADFVSAREAENA 769
Query: 500 FNSLAYTKFKEVPLYLEWAPE 520
++L T L LE+ E
Sbjct: 770 MDALKNTHLLGRRLVLEFVNE 790
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
+ +QLK FE + VTD + RR F+G+ D AQ A+ +FN TY+ S+I
Sbjct: 16 SNDQLKKHFETRFQVTDAHVLPK-----RRMGFVGFKSHDAAQQAVKHFNKTYMKMSKIA 70
Query: 90 VEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSD 149
V D +P S A D+ ++ + K + G+ DP +
Sbjct: 71 V-------DIARPVD-SNDAKDAHPTRRCDTTNDNDASLDNNLKRKRDGENKSEDPKLQE 122
Query: 150 FLQLHGKDVSKLLPLSNKD 168
+L L G SK +N D
Sbjct: 123 YLSLMGAS-SKTRTWANDD 140
>gi|302923914|ref|XP_003053775.1| hypothetical protein NECHADRAFT_30669 [Nectria haematococca mpVI
77-13-4]
gi|256734716|gb|EEU48062.1| hypothetical protein NECHADRAFT_30669 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 182/331 (54%), Gaps = 25/331 (7%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L+AF + R ILVKN PY T +L+ LFE G + RVL+PP G +V+F Q N
Sbjct: 481 LEAFKS--KKRGDTAILVKNFPYGTTIDELRKLFEESGPVLRVLMPPSGTIAIVQFTQPN 538
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
AK+AF LAY + + L+LE AP +F +G ++ ++ +N +
Sbjct: 539 HAKSAFGKLAYRRIGDSVLFLEKAPSDIF-------RGGDQLDQAVSLKDRPAPTVQNLS 591
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
D + E++V+ T+L+++NLNF ++ + F+ S V
Sbjct: 592 VNDLLSRGDKPEDDVDT---------TSLFVRNLNFTTSTTRLAEAFQSLDGFVSARVKT 642
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GFV+F T+ ALKV+ LD+H + +K S++ +A +
Sbjct: 643 KMDPKKPGQTLSMGFGFVEFRTKGQAQAALKVMDGHVLDDHALAVKASHKG--HDAAEER 700
Query: 675 RKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
R+ + G +KI+++N+PFQA + ++ LF +G+L+ VRLPKK RGF F
Sbjct: 701 RREDKAKRAAGQRTKIIIKNLPFQATKKDIRSLFGTYGQLRSVRLPKK--ADYTPRGFAF 758
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
+F+T EA+ A+ AL + THL GR+LVL++
Sbjct: 759 ADFVTPREAENALNAL-RDTHLLGRKLVLDF 788
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I + R+FVRNL Y+ TE+DL + FE +G L EV LP +K + +KGFALV F P
Sbjct: 304 EAIRRTSRLFVRNLPYSATEEDLRETFEGFGTLEEVHLPANK-SGTSKGFALVLFSDPSG 362
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
A +A+Q +DG F GR+LH+IP K + G
Sbjct: 363 AVEAFQAMDGATFQGRILHIIPASAKRDTG 392
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 125/328 (38%), Gaps = 58/328 (17%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFK-PLPLASVRTTFLG-MAYIGFKDEKNCNKALNK- 277
KR I+VKN P G +L+ F+ P+ V G +A + F + A K
Sbjct: 488 KRGDTAILVKNFPYGTTIDELRKLFEESGPVLRVLMPPSGTIAIVQFTQPNHAKSAFGKL 547
Query: 278 ----------------NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWK 321
+ F G QL+ KD A +++N+
Sbjct: 548 AYRRIGDSVLFLEKAPSDIFRGGDQLDQAVSLKDRPA-----------PTVQNLSVNDLL 596
Query: 322 SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK----- 376
S+ D ED ++ +FVRNL++T + L + F+ + + K
Sbjct: 597 SRGDK---PEDDVDTTSLFVRNLNFTTSTTRLAEAFQSLDGFVSARVKTKMDPKKPGQTL 653
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKL- 435
+ GF V F A A + +DG V L + K H ER+
Sbjct: 654 SMGFGFVEFRTKGQAQAALKVMDGHVLDDHALAV----------KASHKGHDAAEERRRE 703
Query: 436 DAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVE 489
D + R+K I++KNLP++ D+++LF +G L V +P P G +
Sbjct: 704 DKAKRAAGQRTK--IIIKNLPFQATKKDIRSLFGTYGQLRSVRLPKKADYTPRGF-AFAD 760
Query: 490 FLQKNQAKAAFNSLAYTKFKEVPLYLEW 517
F+ +A+ A N+L T L L++
Sbjct: 761 FVTPREAENALNALRDTHLLGRKLVLDF 788
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S++ VRN+P+ A + ++ E F+ FG L+ V LP SG +GF V F + A A
Sbjct: 310 SRLFVRNLPYSATEEDLRETFEGFGTLEEVHLPANK--SGTSKGFALVLFSDPSGAVEAF 367
Query: 746 KALCQSTHLYGRRL 759
+A+ +T GR L
Sbjct: 368 QAMDGAT-FQGRIL 380
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
I++ + + F KG +TDV+L RR ++GY D A A+ YFN +Y+ S+
Sbjct: 15 ISEAEFRKHFSAKGREITDVKLIPQ-----RRIGYVGYKTSDDATKAVKYFNKSYIRMSK 69
Query: 88 IKVEKCSNLGDTTKPK----SWSKYAPDSSAYQKL-----HNIAPKQDLKPEHTKDSKPG 138
I VE + D + K S SK+A + + H I D K +P
Sbjct: 70 IAVETARPISDPSLLKGQNTSHSKHASAGTGTGTITKGTEHPIVKDSDASSRKRKRDEP- 128
Query: 139 KKSKNDPTFSDFLQL 153
DP +FLQ+
Sbjct: 129 --QAADPKLREFLQV 141
>gi|451846216|gb|EMD59526.1| hypothetical protein COCSADRAFT_100727 [Cochliobolus sativus
ND90Pr]
Length = 828
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 186/338 (55%), Gaps = 23/338 (6%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L+AF + A+ ILVKN+P+ +L+ LFE G + + L+PP G+T +VEF
Sbjct: 473 LEAFQR--SAKGDLAILVKNIPHGVTADELRKLFEEHGTVNKFLMPPTGMTAIVEFANVA 530
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
QAK+AF SL+Y K K+ LYLE AP+ +F KE + + +
Sbjct: 531 QAKSAFMSLSYRKMKDSILYLEKAPKDLF---KEGVATNFVQTTPSASVPTSTQPGTKLS 587
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
D +PE E TLY++NLNF+++ + + FK S V
Sbjct: 588 ATDLLVDIPEPEATNT----------ATLYVRNLNFSTSTERLIEAFKPLSGFRSAKVKT 637
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK LSMG+GFV+F + E+ AL+ + L+ H++++K S+R ++A +
Sbjct: 638 KVDPKR--GVLSMGFGFVEFNSPETATAALRAMDGYDLEGHKLQIKASHRG--ADAAEER 693
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
R K +KI+++N+PF+A + EV LF +G+L+ VR+PKK S RGFGF E
Sbjct: 694 RNEDAANKAASTKIIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDASS--RGFGFAE 751
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVE 771
F TK +A AM AL ++THL GRRLVL +AE E+D+ E
Sbjct: 752 FTTKRDAVNAMNAL-KNTHLLGRRLVLAFAEAESDDPE 788
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 57/86 (66%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I E+GR+++RNL Y VTED++ + F K+G L EV +P+ K K KGFA V F P A
Sbjct: 297 IRETGRLYLRNLHYEVTEDEIREQFSKHGALEEVHVPLKKADSKGKGFAFVQFQNPNDAV 356
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN 418
+AY D T+F GR+LH+I K K++
Sbjct: 357 EAYLDNDNTIFQGRLLHIISAKAKKD 382
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 139/351 (39%), Gaps = 77/351 (21%)
Query: 227 IVVKNLPAGVKKKDLKAYFKP--------LP------------LASVRTTFLGMAYIGFK 266
I+VKN+P GV +L+ F+ +P +A ++ F+ ++Y K
Sbjct: 486 ILVKNIPHGVTADELRKLFEEHGTVNKFLMPPTGMTAIVEFANVAQAKSAFMSLSYRKMK 545
Query: 267 DEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDS 326
D + K+ F +G N + + S S +A+
Sbjct: 546 DSILYLEKAPKD-LFKEGVATNFVQTTPSASVPTSTQPGTKLSAT--------------- 589
Query: 327 VQFAEDIAE-----SGRIFVRNLSYTVTEDDLTKLFEKYGPL-----AEVILPID-KETD 375
DI E + ++VRNL+++ + + +L E + PL A+V +D K
Sbjct: 590 -DLLVDIPEPEATNTATLYVRNLNFSTSTE---RLIEAFKPLSGFRSAKVKTKVDPKRGV 645
Query: 376 KTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKL 435
+ GF V F PE AT A + +DG G L + K + D R
Sbjct: 646 LSMGFGFVEFNSPETATAALRAMDGYDLEGHKLQI-----KASHRGAD----AAEERRNE 696
Query: 436 DAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVE 489
DA N+ + I++KNLP+ +++ALF P+G L V VP G G E
Sbjct: 697 DAANKAASTK----IIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDASSRGF-GFAE 751
Query: 490 FLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
F K A A N+L T L L FAEA+ KE EK ++
Sbjct: 752 FTTKRDAVNAMNALKNTHLLGRRLVL------AFAEAESDDPEKELEKMQQ 796
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 128/339 (37%), Gaps = 79/339 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N+ + VT D+L KLFE++G + + ++P T A+V F A A+ L
Sbjct: 486 ILVKNIPHGVTADELRKLFEEHGTVNKFLMP------PTGMTAIVEFANVAQAKSAFMSL 539
Query: 399 DGTVFLGRMLHLIPGKPKE--NEGNVDGKVHCCISER---------KLDAFNQVV----- 442
+L+L PK+ EG V S KL A + +V
Sbjct: 540 SYRKMKDSILYL-EKAPKDLFKEGVATNFVQTTPSASVPTSTQPGTKLSATDLLVDIPEP 598
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGIT----GLVEFLQK 493
EA + + V+NL + T L F+P V P G+ G VEF
Sbjct: 599 EATNTATLYVRNLNFSTSTERLIEAFKPLSGFRSAKVKTKVDPKRGVLSMGFGFVEFNSP 658
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
A AA ++ EG + K +G + EE + E+
Sbjct: 659 ETATAALRAMDGYDL-----------EGHKLQIKASHRG---------ADAAEERRNEDA 698
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
A N+ T + IKNL F +++ +R F G + SV V
Sbjct: 699 A---NKAA------------------STKIIIKNLPFEASKKEVRALFAPYGQLRSVRVP 737
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+K D S G+GF +F T+ A+ L+N+ L
Sbjct: 738 KKFDASS------RGFGFAEFTTKRDAVNAMNALKNTHL 770
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 93/237 (39%), Gaps = 45/237 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRTTF--------LGMAYIGFKDEKNCNKA 274
T+ V+NL + L FKPL A V+T +G ++ F + A
Sbjct: 605 TLYVRNLNFSTSTERLIEAFKPLSGFRSAKVKTKVDPKRGVLSMGFGFVEFNSPETATAA 664
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
L G L +K S + + AA++ N ED A + A
Sbjct: 665 LRA----MDGYDLEGHKLQIKASHRGADAAEERRN--------------ED----AANKA 702
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
S +I ++NL + ++ ++ LF YG L V +P K ++GF F A A
Sbjct: 703 ASTKIIIKNLPFEASKKEVRALFAPYGQLRSVRVP-KKFDASSRGFGFAEFTTKRDAVNA 761
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
L T LGR L L + + ++ E++L+ Q V A++ ++ L
Sbjct: 762 MNALKNTHLLGRRLVLAFAEAESDD-----------PEKELEKMQQKVGAQANKVAL 807
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
A+ + Q + E E DEE + LY++NL++ TED IR F K G + V V
Sbjct: 274 AQPEPPQPMAEQPETAAPDEEDKIRETGRLYLRNLHYEVTEDEIREQFSKHGALEEVHVP 333
Query: 614 RKKDPKSPGQFLSMGYGFVQF 634
KK S G+ G+ FVQF
Sbjct: 334 LKK-ADSKGK----GFAFVQF 349
>gi|448122956|ref|XP_004204573.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|448125223|ref|XP_004205131.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|358249764|emb|CCE72830.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|358350112|emb|CCE73391.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
Length = 841
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 182/629 (28%), Positives = 293/629 (46%), Gaps = 97/629 (15%)
Query: 168 DGEEKEEENEDESNNQIAH-ADISDMEYLKLKTKSKDTAPSDPSV--PPVS--------- 215
DGE+ E NE E+++Q A ++SD+E+LK + +D S PP +
Sbjct: 230 DGEDNVE-NEQETSDQAARDPNVSDLEWLKSHRRHMRDNENDASQEEPPKAAEQDQEESY 288
Query: 216 --------KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTF-------LG 259
KA R+ + V+N+ K++D KA F PL V G
Sbjct: 289 MEEKTDEEKAVDRIRETGRLFVRNILYTSKEEDFKALFDQYGPLEEVHMAIDTRTGKPKG 348
Query: 260 MAYIGFKDEKNCNKAL-NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
Y+ FK+ ++ +A + +K ++G+ L+I AK S D+++ ++ K +
Sbjct: 349 YVYVQFKNSEDALEAYRSMDKQIFQGRLLHILPAD----AKKSHRLDEDDIKNLPLKKQR 404
Query: 319 HWKSQEDSVQFAEDIAESGRI-FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
K + A +G+ F N Y T+ L + K G
Sbjct: 405 ELKRK----------ATAGKSQFSWNSLYMNTDAVLESVAAKMG---------------- 438
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
+ + + P++++ A + E +V G V + +D
Sbjct: 439 --MSKSSIIDPQNSSSAVKQALA------------------EADVIGDVRKYFESKYVDL 478
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAK 497
+ + R R+ILVKN P+ T ++L LF +G L R+L+PP G +V+F A+
Sbjct: 479 TSFSRKERDDRVILVKNFPFGTSSSELGELFSVYGQLNRILMPPAGTIAIVQFRDVPSAR 538
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEED 557
AAF+ LAY +FK+ LYLE P+ +F + + ++ EK + E AE +
Sbjct: 539 AAFSKLAYKRFKKSILYLEKGPKDLFTREVSEEESEKLEKKDNVVEPKLTADDLMVAEGN 598
Query: 558 NQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
N + EV+ P ++++KNLNF +T +++ FK V K D
Sbjct: 599 NGDAINEVDTY--------EGPTVSVFVKNLNFATTNEALSNAFKSVPGFILALVKTKPD 650
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
PK P LSMG+GFV+F T+E N A+K + LD H+++LK SNR S +
Sbjct: 651 PKKPDSTLSMGFGFVEFKTKEDANTAIKTMDGYVLDGHKLQLKLSNRQGGS-----GKNE 705
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
+ SKI+++N+PF+ + ++ ELF AFG++K R+PKK S RGF FVEF
Sbjct: 706 TKTKSSKSSKIIIKNLPFETTRKDIVELFGAFGQIKSARVPKKFDRSA--RGFAFVEFNL 763
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
EA+ A++ L Q HL GRRLV+++AE+
Sbjct: 764 LKEAENAIEQL-QGVHLLGRRLVMQYAEQ 791
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T+E+L+ F ++G VTDV++ +G+ RRF F+GY + A A +FN +++ +SRI
Sbjct: 13 LTEERLRQHFSQRGDVTDVKIMRKRDGESRRFGFVGYRGVEDASDAEKFFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKS-----WSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKN 143
+VE + D P S + K Q+L + ++ K + T S+ ++ +
Sbjct: 73 EVELAKSFADPNVPASVRKRQYMKLESLKEQEQRLFELENQRKEKKQKTSKSQIDEEIQK 132
Query: 144 DPTFSDFLQL 153
+P +++++
Sbjct: 133 NPQLREYMEV 142
>gi|388854650|emb|CCF51807.1| probable RNA-binding protein [Ustilago hordei]
Length = 874
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 190/339 (56%), Gaps = 22/339 (6%)
Query: 435 LDAFNQVVEA-RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+DAFN+ + RS +LVKN+PY T +++ LFE FG++ +VL+PP G +VE +
Sbjct: 503 VDAFNRSGKVERSNTTMLVKNIPYGTSVEEVQKLFEEFGEVDKVLIPPSGTIAIVEMPVE 562
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+AK AF ++AY +FK LYLE AP G+ K G++K + K T
Sbjct: 563 GEAKVAFRAIAYKRFKGGILYLEKAPVGLLDTKKAGGAGEKKVV--------QAPIKGKT 614
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
+E + N+ E E+ E TLY+KNL+F++T++ + F A V
Sbjct: 615 IDEASNPSA-----NIAEGED-EAVDGATLYVKNLSFSTTDERLVSTFHGLSDYAFARVQ 668
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
K DP+ G LSMGY FV F + ++ A K + LD H + + + RN+E+ ++
Sbjct: 669 TKPDPRRSGARLSMGYAFVGFKSIDAARTAQKTMNGKVLDGHTLVVTFARRNVETTTSSS 728
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
S+N +KILV+N+PF+A + ++ +LF + G +K VRLPKK S RGF FV
Sbjct: 729 LSSSANGT----TKILVKNLPFEATKKDIRDLFSSQGLVKSVRLPKKFDNS--TRGFAFV 782
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVED 772
E+ T EA+ AM+AL + THL GR LVL+W++ A E+
Sbjct: 783 EYTTVREAQAAMEAL-KHTHLLGRHLVLQWSKTATTAEE 820
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T +L+ F +KG VTDV+L +G R+F F+GY E++A+ ALDYFN T++ ++RI
Sbjct: 13 LTDARLREHFSQKGAVTDVKLMRRPDGTSRKFGFVGYRSEEEARQALDYFNRTFIDTARI 72
Query: 89 KVEKCSNLGD 98
++ +GD
Sbjct: 73 SIQFAKKIGD 82
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 28/208 (13%)
Query: 330 AEDIAESG-RIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKETDKTKGFALV 383
ED A G ++V+NLS++ T++ L F A + P + G+A V
Sbjct: 628 GEDEAVDGATLYVKNLSFSTTDERLVSTFHGLSDYAFARVQTKPDPRRSGARLSMGYAFV 687
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVE 443
F + A A + ++G V G L + + NV+ +S
Sbjct: 688 GFKSIDAARTAQKTMNGKVLDGHTLVVTFARR-----NVETTTSSSLSS----------S 732
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAK 497
A ILVKNLP+ D++ LF G + V +P G VE+ +A+
Sbjct: 733 ANGTTKILVKNLPFEATKKDIRDLFSSQGLVKSVRLPKKFDNSTRGF-AFVEYTTVREAQ 791
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAE 525
AA +L +T L L+W+ AE
Sbjct: 792 AAMEALKHTHLLGRHLVLQWSKTATTAE 819
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLP--KKMVGSGLHRGFGFVEFITKNEAKRA 744
++ VRN+PF A + EV+ F++FG +K V +P K+ S +G F+ F A A
Sbjct: 330 RLFVRNLPFAASEDEVQSFFESFGSVKQVHIPLDKQTKAS---KGLAFISFTDPAHALAA 386
Query: 745 MKALCQSTHLYGRRLVL 761
+A ST GR L L
Sbjct: 387 FRAKDGST-FQGRLLHL 402
>gi|226292390|gb|EEH47810.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 820
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 182/334 (54%), Gaps = 25/334 (7%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F Q + + ILVKN + DL+ LFE FG++ R+L+PP G +VEF +
Sbjct: 464 LDSFKQREQGNTA--ILVKNFSFSVKAEDLRKLFESFGEIKRLLMPPSGTIAIVEFALAD 521
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+ + AF LAY K + L+LE AP+ +F EK + +
Sbjct: 522 ECQKAFKGLAYRKLGDSILFLERAPKDLF---------DEKAIATNAVLPAPRVVSQTFS 572
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
D + E DE P +TL+++NLNF++T + F+ S V
Sbjct: 573 TSDTFKAS-------EADENETPLETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKT 625
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K +PK PG+ LSMG+GFV+F T AL + LD+H++ +K S++ ++ A +
Sbjct: 626 KPNPKRPGETLSMGFGFVEFRTSAQARAALATMNGYKLDQHELVIKTSHKAMD--AAEER 683
Query: 675 RKSSNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
R+ N K G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K + RGF F
Sbjct: 684 RREDNAKKLAMRGTKILIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTA--RGFAF 741
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
+FI+ EA+ AM+AL + THL GRRLVLE+A E
Sbjct: 742 ADFISVREAENAMEAL-KHTHLLGRRLVLEFASE 774
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 365 EVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
++ + D K+KGFA + ++ PE A QAYQ LDG F GR+LH++P PK
Sbjct: 320 DIHVAFDTRQSKSKGFAYIQYVDPEAAIQAYQVLDGKDFEGRLLHILPASPK 371
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ + L+ F + VTD + RR F+G+ AQ A+DYFN +Y+ S+I
Sbjct: 16 FSNDDLRKHFSIRFQVTDAHVIPK-----RRIGFVGFKTPSLAQDAVDYFNKSYIRMSKI 70
Query: 89 KVEKCSNLGDTTKP---KSWSKY--APDSSAYQKLHN-IAPKQDLK-PEHTKDSKPGKKS 141
VE + D P KS SK+ + +S++ ++ H+ + KQDLK E+ +P KS
Sbjct: 71 AVEMARPI-DAEPPTVGKSHSKHGTSANSTSLKRKHDQVEQKQDLKLQEYIAAMQPPMKS 129
Query: 142 K 142
K
Sbjct: 130 K 130
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 21/204 (10%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVIL--PIDKETDKT--KGFALVTFLMPE 389
E+ +FVRNL+++ T L ++F+ G L+ + P K +T GF V F
Sbjct: 590 ETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRPGETLSMGFGFVEFRTSA 649
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A A ++G L + K ER+ + + + R +I
Sbjct: 650 QARAALATMNGYKLDQHELVI----------KTSHKAMDAAEERRREDNAKKLAMRGTKI 699
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP-YGIT----GLVEFLQKNQAKAAFNSLA 504
L+KNLP++ D++ LF +G L V VP + T +F+ +A+ A +L
Sbjct: 700 -LIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTARGFAFADFISVREAENAMEALK 758
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKE 528
+T L LE+A E KE
Sbjct: 759 HTHLLGRRLVLEFASEEAIDPEKE 782
>gi|344301140|gb|EGW31452.1| multiple RNA-binding domain-containing protein 1 [Spathaspora
passalidarum NRRL Y-27907]
Length = 841
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 193/371 (52%), Gaps = 26/371 (7%)
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
E +V G V +R +D + R +IILVKN P+ T +L LF +G + R+L
Sbjct: 465 EAHVIGDVRKYFEDRGIDLTTFDRKERDDKIILVKNFPFGTTIEELGNLFSEYGQIKRML 524
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFA-EAKEKSKGKEKEK 537
+PP G +VEF A+AAF LAY +FK +YLE P+ +F E K + E
Sbjct: 525 MPPAGTIAIVEFRDAPSARAAFAKLAYRRFKTSIIYLEKGPKDLFLREPKPEENISVPEI 584
Query: 538 NEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSI 597
+ E + E EE P E+V E P +++KNLNF++T +++
Sbjct: 585 EQSTAVEAKVTAHEILGEE------PANNEDVIEG------PTVAIFVKNLNFSTTVEAL 632
Query: 598 RRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQI 657
FK TV K DPK PG LSMG+GFV+F T+E N A+ L LD H++
Sbjct: 633 SALFKPLPGFVIATVKTKPDPKKPGNTLSMGFGFVEFKTKEFANAAISNLDGHILDGHKL 692
Query: 658 ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
+LK S++ ++ SK++++N+PF+A + ++ ELF AFG+LK VR+
Sbjct: 693 QLKLSHKQ-----GGSNAAAAAKKSNKSSKLIIKNLPFEATRKDLLELFGAFGQLKSVRV 747
Query: 718 PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE-----ADNVED 772
PKK S RGF FVEF EA+ AM L + HL GRRLV+++AE+ +E
Sbjct: 748 PKKFDSSA--RGFAFVEFNLMKEAENAMNQL-EGVHLLGRRLVMQYAEQDAEDAEAEIEK 804
Query: 773 IRKRTNRYFGT 783
+ K+ R T
Sbjct: 805 MTKKVKRQVAT 815
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%)
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
Q E + E+GR+F+RN+ Y TE+D LFE YG L EV + ID T K+KGF V F
Sbjct: 302 QTVEKLQETGRLFIRNILYDSTENDFRNLFEPYGTLEEVHIAIDTRTGKSKGFVYVQFAN 361
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
PE A +AY+ LD +F GR+LH++ G K++
Sbjct: 362 PEDAVRAYKSLDKQIFQGRLLHILAGDKKKD 392
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+++L+ F ++G VTDV+L G+ RRFAFIGY + A+ A +FN +++ ++RI
Sbjct: 14 TEDKLREYFSKQGDVTDVKLMKKRNGESRRFAFIGYKSTEDAEQAARFFNRSFIDTARID 73
Query: 90 VEKCSNLGDTTKPKSW 105
VE D P S+
Sbjct: 74 VELAKTFSDPNVPLSF 89
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 39/198 (19%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCN 272
I VKNL + L A FKPLP +A+V+T +G ++ FK ++ N
Sbjct: 617 AIFVKNLNFSTTVEALSALFKPLPGFVIATVKTKPDPKKPGNTLSMGFGFVEFKTKEFAN 676
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
A+ S G L+ +K +K H + ++ A+
Sbjct: 677 AAI----SNLDGHILDGHKL---------------------QLKLSHKQGGSNAAAAAKK 711
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+S ++ ++NL + T DL +LF +G L V +P K +GFA V F + + A
Sbjct: 712 SNKSSKLIIKNLPFEATRKDLLELFGAFGQLKSVRVP-KKFDSSARGFAFVEFNLMKEAE 770
Query: 393 QAYQHLDGTVFLGRMLHL 410
A L+G LGR L +
Sbjct: 771 NAMNQLEGVHLLGRRLVM 788
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 83/204 (40%), Gaps = 36/204 (17%)
Query: 331 EDIAE--SGRIFVRNLSYTVTEDDLTKLFEKYGPL-AEVILPIDKETDKTK-------GF 380
ED+ E + IFV+NL+++ T + L+ LF+ PL VI + + D K GF
Sbjct: 608 EDVIEGPTVAIFVKNLNFSTTVEALSALFK---PLPGFVIATVKTKPDPKKPGNTLSMGF 664
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQ 440
V F E A A +LDG + G L L K +G +
Sbjct: 665 GFVEFKTKEFANAAISNLDGHILDGHKLQL---KLSHKQGGSNAAAAAK----------- 710
Query: 441 VVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKN 494
++ +++KNLP+ DL LF FG L V VP G VEF
Sbjct: 711 --KSNKSSKLIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDSSARGF-AFVEFNLMK 767
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWA 518
+A+ A N L L +++A
Sbjct: 768 EAENAMNQLEGVHLLGRRLVMQYA 791
>gi|396480635|ref|XP_003841040.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
gi|312217614|emb|CBX97561.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
Length = 831
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 191/342 (55%), Gaps = 37/342 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L+AF + A+ ILVKN+P+ +L+ LFE +G + R L+PP G++ ++E+
Sbjct: 481 LEAFQR--SAKGDTAILVKNIPHGVTSDELRKLFEEYGTVIRFLMPPTGMSAIIEYSNAA 538
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AK AF SL+Y + K +YLE AP+ +F +EG + +
Sbjct: 539 EAKTAFASLSYRRLKNSIIYLEKAPKDLF----------------KEGVVPNVPQPVSVG 582
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDT----TLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
+ + ++ E+ PEP+T TL+++NLNF +T + + FK S
Sbjct: 583 KAGTKLSATDLLEDA-------PEPETSDTATLFVRNLNFTTTSERLTEAFKPLSGFRSA 635
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V K DPK LSMG+GFV+F E+ AL+ + L+ H++++K S++ ++A
Sbjct: 636 KVKTKIDPKR--GVLSMGFGFVEFTNAETATAALRTMDGHDLEGHKLQIKASHKG--ADA 691
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
+R+ + K +KIL++N+PF+A + EV LF +G+L+ VR+PKK S RGF
Sbjct: 692 AEERRREDALKKAASTKILIKNLPFEASKKEVRALFTPYGQLRSVRVPKKFDSSS--RGF 749
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVE 771
GF EF TK +A AM AL ++THL GRRLVL +AE E+D+ E
Sbjct: 750 GFAEFTTKRDALNAMNAL-KNTHLLGRRLVLAFAETESDDPE 790
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Query: 325 DSVQFAED-IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
D+ ED I E+GR+F+RNL Y VTED+L + F K+GPL EV +P++K K KGFA V
Sbjct: 296 DATSAEEDRIRETGRLFLRNLHYEVTEDELREQFAKHGPLQEVHVPLNKADGKGKGFAFV 355
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
F +HA +AY D T+F GR+LH+I K K +
Sbjct: 356 QFQNHDHAVEAYLDNDNTIFQGRLLHIISAKAKRD 390
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 142/546 (26%), Positives = 216/546 (39%), Gaps = 97/546 (17%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYT-TEGKFRRFAFIGYHREDQA-QAALDYFNNTYVF 84
Y++T+++L+ +F + G + +V + +GK + FAF+ + D A +A LD N+ +F
Sbjct: 318 YEVTEDELREQFAKHGPLQEVHVPLNKADGKGKGFAFVQFQNHDHAVEAYLD--NDNTIF 375
Query: 85 SSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKN- 143
R L K+ A D KL P + K E + + K + N
Sbjct: 376 QGR--------LLHIISAKAKRDTALDEFEISKL----PLKKQK-EIRRKQEAAKTTFNW 422
Query: 144 -------DPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENE----DESNNQIAHADISDM 192
D S G S+LL ++ D K+ E E+ A + D+
Sbjct: 423 NSLYMNADAVMSTVASRMGISKSELLDPTSSDAAVKQAHAETHIIQETKTYFAQQGV-DL 481
Query: 193 EYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS 252
E + K DTA I+VKN+P GV +L+ F+
Sbjct: 482 EAFQRSAKG-DTA---------------------ILVKNIPHGVTSDELRKLFEEY---G 516
Query: 253 VRTTFL----GM-AYIGFKDEKNCNKALNKNKSFWKGKQLNIY--KYSKDNSAKYSGAAD 305
FL GM A I + + A + S+ + K IY K KD +
Sbjct: 517 TVIRFLMPPTGMSAIIEYSNAAEAKTAF-ASLSYRRLKNSIIYLEKAPKD---LFKEGVV 572
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAED--IAESGRIFVRNLSYTVTEDDLTKLFEKYGPL 363
N + KA S D ++ A + +++ +FVRNL++T T + LT+ F+
Sbjct: 573 PNVPQPVSVGKAGTKLSATDLLEDAPEPETSDTATLFVRNLNFTTTSERLTEAFKPLSGF 632
Query: 364 --AEVILPID-KETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
A+V ID K + GF V F E AT A + +DG G L + K +
Sbjct: 633 RSAKVKTKIDPKRGVLSMGFGFVEFTNAETATAALRTMDGHDLEGHKLQI-----KASHK 687
Query: 421 NVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP 480
D R+ DA + + IL+KNLP+ +++ALF P+G L V VP
Sbjct: 688 GAD----AAEERRREDALKKAASTK----ILIKNLPFEASKKEVRALFTPYGQLRSVRVP 739
Query: 481 ------PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE 534
G G EF K A A N+L T L L FAE + KE
Sbjct: 740 KKFDSSSRGF-GFAEFTTKRDALNAMNALKNTHLLGRRLVL------AFAETESDDPEKE 792
Query: 535 KEKNEE 540
EK ++
Sbjct: 793 LEKMQQ 798
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 128/333 (38%), Gaps = 73/333 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N+ + VT D+L KLFE+YG + ++P T A++ + A A+ L
Sbjct: 494 ILVKNIPHGVTSDELRKLFEEYGTVIRFLMP------PTGMSAIIEYSNAAEAKTAFASL 547
Query: 399 DGTVFLGRMLHLIPGKPKE--NEG---NVDGKVHCCISERKLDAFNQVVEA-----RSKR 448
+++L PK+ EG NV V + KL A + + +A
Sbjct: 548 SYRRLKNSIIYL-EKAPKDLFKEGVVPNVPQPVSVGKAGTKLSATDLLEDAPEPETSDTA 606
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGIT----GLVEFLQKNQAKAA 499
+ V+NL + T L F+P V P G+ G VEF A AA
Sbjct: 607 TLFVRNLNFTTTSERLTEAFKPLSGFRSAKVKTKIDPKRGVLSMGFGFVEFTNAETATAA 666
Query: 500 FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQ 559
++ +G + E K + A +
Sbjct: 667 LRTM-------------------------------------DGHDLEGHKLQIKA---SH 686
Query: 560 QGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
+G EE ED ++ T + IKNL F +++ +R F G + SV V +K D
Sbjct: 687 KGADAAEERRREDALKKAA-STKILIKNLPFEASKKEVRALFTPYGQLRSVRVPKKFDSS 745
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
S G+GF +F T+ A+ L+N+ L
Sbjct: 746 S------RGFGFAEFTTKRDALNAMNALKNTHL 772
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 14/127 (11%)
Query: 34 LKAKFEEKGTVTDVQLKYTTEGKF---RRFAFIGYHREDQAQAALDYFNNTYVFSSRIKV 90
L + F E G T+ KF RR ++GY A A+ YF+ T++ +RI
Sbjct: 11 LPSNFTEDGMRKHFGRYPITDVKFFPHRRIGYVGYKTPQDAAQAVKYFDKTFIKLTRIYA 70
Query: 91 EKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQD-LKPEHTKDSKPGKKS--KNDPTF 147
E + D PKS + QK+ + PK D P+ ++ K++ + DP
Sbjct: 71 EIARPIADKELPKSRRQ--------QKMEALTPKTDEYVPKRQENELKRKRAEVEQDPKL 122
Query: 148 SDFLQLH 154
+FL+++
Sbjct: 123 KEFLEVY 129
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 554 AEEDNQQGVPEVEE------NVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPI 607
A E+++ P EE + EED RE L+++NL++ TED +R F K GP+
Sbjct: 279 APEESKAEAPAAEEPNVDATSAEEDRIRE---TGRLFLRNLHYEVTEDELREQFAKHGPL 335
Query: 608 ASVTVARKKDPKSPGQFLSMGYGFVQF 634
V V P + G+ FVQF
Sbjct: 336 QEVHV-----PLNKADGKGKGFAFVQF 357
>gi|412990000|emb|CCO20642.1| predicted protein [Bathycoccus prasinos]
Length = 992
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 215/379 (56%), Gaps = 41/379 (10%)
Query: 411 IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEP 470
+ K+ G+V VH E ++ V ARS+ IL+KNLPY + +DL+ + E
Sbjct: 592 VIANTKKELGDVGVNVHAL--ESAAESRENVKIARSQHSILIKNLPYESEESDLREMCEK 649
Query: 471 FGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKS 530
FG L ++++P + EFL+ N+A+ AF LAY +++ VPLY+EWAP+ +F +K+K+
Sbjct: 650 FGTLSQLVLPSTRTIAIAEFLESNEARRAFQGLAYKRYRHVPLYVEWAPKDIFKTSKKKN 709
Query: 531 KGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNF 590
++++ E +E + + T E N+ ++VEED E E L++KN++F
Sbjct: 710 D-----DDDDDATENDERRTKFTKETSNK-------DDVEEDPE---EKSKVLFVKNIDF 754
Query: 591 NSTEDSIRRHF----KKCGP----IASVTVARKKDPKSPGQ-FLSMGYGFVQFYTRESLN 641
+T++S + F K+ G + S +ARK P S G+ LS G+GFV+F + E+ +
Sbjct: 755 ATTDESFLQFFENLCKRAGGKNRRLVSAKIARK--PNSDGKSLLSKGFGFVEFESHETAS 812
Query: 642 QALKVLQN--SSLDEH--QIELKRSNRNLE------SEATTVKRKSSNVAKQTGSKILVR 691
K++ LD IEL R + E + A +K+KS ++ +K+++R
Sbjct: 813 ICSKLVSTGIGKLDGKVLSIELSRQKMSRETVEDDNTNALAMKKKSKIPKGKSATKLVLR 872
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
N+ F+A + +V+ LF FG LK VR+PKK GS HRGF F+E+ T+ EA AM AL +
Sbjct: 873 NVAFEATKRDVQLLFNPFGVLKSVRVPKKFDGS--HRGFAFIEYTTQREATDAMDALGNA 930
Query: 752 THLYGRRLVLEWAEEADNV 770
HLYGR+ V+E A+E + V
Sbjct: 931 -HLYGRKCVIERADEDETV 948
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDKTKGFALVTFLMPE 389
E + E+GR+F+RNL YT TE+++ + + G L V + +DK T ++KG A TF +PE
Sbjct: 408 ESLQETGRVFLRNLPYTCTEEEIFDHMQSHVGKLTAVHVLVDKSTKQSKGLAYATFALPE 467
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGK--PKENEGNVDGKV 426
+ LDG +F GR+LH++P K P E N G V
Sbjct: 468 DGVKCIDVLDGAIFQGRILHVLPAKRAPTNAEKNTLGGV 506
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I ++NL Y E DL ++ EK+G L++++LP T+ A+ FL A +A+Q L
Sbjct: 629 ILIKNLPYESEESDLREMCEKFGTLSQLVLP------STRTIAIAEFLESNEARRAFQGL 682
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 22/107 (20%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGK-------------------FRRFAFIGYHREDQ 70
T+ + + F G VTD +K T G R FIGY E
Sbjct: 44 TEVRFREHFSTIGEVTDCVIKNTHGGTNDNDSRSSWRQHRKQQQQTSRCLGFIGYKTEQM 103
Query: 71 AQAALDYFNNTYVFSSRIKVEKCSNLGD---TTKPKSWSKYAPDSSA 114
A A YF+NT++ +SRI V ++ + ++ SWSKY+ +SA
Sbjct: 104 AILAQKYFHNTFIDTSRIDVSFAASRKERAALSERSSWSKYSAGTSA 150
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 136/335 (40%), Gaps = 50/335 (14%)
Query: 222 RQYHTIVVKNLPAGVKKKDLK------AYFKPLPLASVRTTFLGMAYIGFKDEKNCNKAL 275
R H+I++KNLP ++ DL+ L L S RT +A F + +A
Sbjct: 624 RSQHSILIKNLPYESEESDLREMCEKFGTLSQLVLPSTRT----IAIAEFLESNEARRAF 679
Query: 276 N--KNKSF--------WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQED 325
K + W K +I+K SK + A +N+ + K S +D
Sbjct: 680 QGLAYKRYRHVPLYVEWAPK--DIFKTSKKKNDDDDDDATENDERRTKFTKE---TSNKD 734
Query: 326 SVQFAEDIAESGRI-FVRNLSYTVTEDDLTKLFEKYGPLAE------VILPI------DK 372
V+ ED E ++ FV+N+ + T++ + FE A V I D
Sbjct: 735 DVE--EDPEEKSKVLFVKNIDFATTDESFLQFFENLCKRAGGKNRRLVSAKIARKPNSDG 792
Query: 373 ETDKTKGFALVTFLMPEHATQAYQHLDGTV--FLGRMLHLIPGKPKENEGNVDGKVHCCI 430
++ +KGF V F E A+ + + + G++L + + K + V+ +
Sbjct: 793 KSLLSKGFGFVEFESHETASICSKLVSTGIGKLDGKVLSIELSRQKMSRETVEDDNTNAL 852
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-----PYGIT 485
+ + +++ + +S ++++N+ + D++ LF PFG L V VP +
Sbjct: 853 A---MKKKSKIPKGKSATKLVLRNVAFEATKRDVQLLFNPFGVLKSVRVPKKFDGSHRGF 909
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPE 520
+E+ + +A A ++L +E A E
Sbjct: 910 AFIEYTTQREATDAMDALGNAHLYGRKCVIERADE 944
>gi|68468570|ref|XP_721604.1| hypothetical protein CaO19.9215 [Candida albicans SC5314]
gi|46443527|gb|EAL02808.1| hypothetical protein CaO19.9215 [Candida albicans SC5314]
Length = 845
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 194/355 (54%), Gaps = 20/355 (5%)
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
E +V G V +R +D + + R +IILVKN P+ T ++ LF +G L R+L
Sbjct: 464 EAHVIGDVRKYFEDRGVDLTSFDKKERDDKIILVKNFPFGTTIDEIGELFSAYGQLKRML 523
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN 538
+PP G ++EF A+AAF+ LAY +FK LYLE P+ +F +E
Sbjct: 524 MPPAGTIAIIEFRDAPSARAAFSKLAYKRFKSSILYLEKGPKDLFT----------REPT 573
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDE-EREPEPDTTLYIKNLNFNSTEDSI 597
E E+++ A E + E+ E+DE E P +++KNLNF +T ++
Sbjct: 574 TNEVATIPEQQQNEHAVEAKISANEILGESKEDDEIESVQGPTVAVFVKNLNFATTVQAL 633
Query: 598 RRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQI 657
FK TV K DPK+ G+ LSMG+GFV+F T+E N A+ L LD H++
Sbjct: 634 SDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANVAISTLDGHVLDGHKL 693
Query: 658 ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
+LK S++ T SS SKI+++N+PF+A + ++ ELF AFG+LK VR+
Sbjct: 694 QLKLSHKQ-----GTGTSASSIKKSGKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRV 748
Query: 718 PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE-ADNVE 771
PKK S RGF FVEF EA+ AM L + HL GRRLV+++AE+ A+N E
Sbjct: 749 PKKFDQSA--RGFAFVEFNLMKEAETAMSQL-EGVHLLGRRLVMQYAEQDAENAE 800
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%)
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
Q A+ I E+GR+F+RN+SY +E+D LF +YG L EV + ID T K+KGF V FL
Sbjct: 301 QIAQKIEETGRLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLK 360
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
E AT+AY+ LD +F GR+LH++P K++
Sbjct: 361 KEDATRAYRSLDKQIFQGRLLHILPADKKKD 391
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E+L+ F ++G VTDV+L G+ R+FAFIGY D A+ A+ YFN +++ ++RI+
Sbjct: 14 TEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKYFNKSFIDTARIE 73
Query: 90 VEKCSNLGDTTKPKSW 105
VE D T P S+
Sbjct: 74 VEFAKTFSDPTVPLSF 89
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 41/198 (20%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCNK 273
+ VKNL + L FKPLP +A+V+T +G ++ F+ ++ N
Sbjct: 619 VFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANV 678
Query: 274 ALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI 333
A+ S G L+ +K +K H + S +
Sbjct: 679 AI----STLDGHVLDGHKL---------------------QLKLSHKQGTGTSASSIKKS 713
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHAT 392
+S +I ++NL + T DL +LF +G L V +P K+ D++ +GFA V F + + A
Sbjct: 714 GKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRVP--KKFDQSARGFAFVEFNLMKEAE 771
Query: 393 QAYQHLDGTVFLGRMLHL 410
A L+G LGR L +
Sbjct: 772 TAMSQLEGVHLLGRRLVM 789
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 77/199 (38%), Gaps = 44/199 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N + T D++ +LF YG L +++P A++ F A A+ L
Sbjct: 495 ILVKNFPFGTTIDEIGELFSAYGQLKRMLMP------PAGTIAIIEFRDAPSARAAFSKL 548
Query: 399 DGTVFLGRMLHLIPG------------------KPKENEGNVDGKVHC--CISERKLDAF 438
F +L+L G + ++NE V+ K+ + E K D
Sbjct: 549 AYKRFKSSILYLEKGPKDLFTREPTTNEVATIPEQQQNEHAVEAKISANEILGESKEDDE 608
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGI 484
+ V+ + + VKNL + T L LF+P G+ L +
Sbjct: 609 IESVQGPT-VAVFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGF-- 665
Query: 485 TGLVEFLQKNQAKAAFNSL 503
G VEF K QA A ++L
Sbjct: 666 -GFVEFRTKEQANVAISTL 683
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 75/194 (38%), Gaps = 34/194 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVIL------PIDKETDKT--KGFALVTFLMPEH 390
+FV+NL++ T L+ LF+ PL ++ P K + KT GF V F E
Sbjct: 619 VFVKNLNFATTVQALSDLFK---PLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQ 675
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
A A LDG V G L L K +G ++ I
Sbjct: 676 ANVAISTLDGHVLDGHKLQL---KLSHKQGTGTSASSIK-------------KSGKSSKI 719
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLA 504
++KNLP+ DL LF FG L V VP G VEF +A+ A + L
Sbjct: 720 IIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGF-AFVEFNLMKEAETAMSQLE 778
Query: 505 YTKFKEVPLYLEWA 518
L +++A
Sbjct: 779 GVHLLGRRLVMQYA 792
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+TG ++ +RNI ++A + + LF +G L+ V + +G +GF +V+F+ K +A
Sbjct: 308 ETG-RLFIRNISYEASEEDFRSLFSQYGALEEVHIAID-TRTGKSKGFLYVQFLKKEDAT 365
Query: 743 RAMKALCQSTHLYGRRL 759
RA ++L + GR L
Sbjct: 366 RAYRSLDKQI-FQGRLL 381
>gi|71012413|ref|XP_758493.1| hypothetical protein UM02346.1 [Ustilago maydis 521]
gi|74702789|sp|Q4PC17.1|MRD1_USTMA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|46098151|gb|EAK83384.1| hypothetical protein UM02346.1 [Ustilago maydis 521]
Length = 858
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 198/386 (51%), Gaps = 42/386 (10%)
Query: 415 PKENEGNVDGKVHCCISERKL---------------DAFNQVVEARSKRIILVKNLPYRT 459
P N G + V ++E ++ DAF RS ILVKN+PY T
Sbjct: 453 PGANGGADNAAVRLALAETRIIQETKEFLAQQGINVDAFQGAKGPRSDTTILVKNIPYGT 512
Query: 460 LPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAP 519
+++ LF G++ +VL+PP G +VE N+A+ AF ++AY +FK LYLE AP
Sbjct: 513 SAEEVEKLFGEHGEVDKVLIPPSGTIAVVEMPVVNEARLAFRAIAYKRFKGGILYLEKAP 572
Query: 520 EGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEP 579
G+ + K EK + + + + D G +E V+
Sbjct: 573 VGLLTQ----HKVGEKVVKQAPIVGKSIDSSNPSVDLDGPAGAGAGDEAVD--------- 619
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
TLY+KNL+F++T++ + F A + K DP+ PG LSMGYGFV F + ++
Sbjct: 620 GATLYVKNLSFSTTDERLTAFFHGLSDFAFARIQTKPDPRRPGARLSMGYGFVGFKSIDA 679
Query: 640 LNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQ 699
A K + LD H + + + RN E+ T++ S +KIL++N+PF+A +
Sbjct: 680 ARTAQKAMDGKVLDAHTLVVTFARRNAEASTTSISSGGS-------TKILIKNLPFEATK 732
Query: 700 SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
++ +LF + G+LK VRLPKK RGFGFVE+ T EA+ AM+AL + THL GR L
Sbjct: 733 RDIRDLFSSQGQLKSVRLPKKF--DNTTRGFGFVEYSTVREAQSAMEAL-KHTHLLGRHL 789
Query: 760 VLEWAEEADN----VEDIRKRTNRYF 781
VL+W+ A + V+ R +T ++F
Sbjct: 790 VLQWSHLASSTQQQVDMQRSKTKQHF 815
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 65/103 (63%)
Query: 315 IKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET 374
++ K ++ E + + I ESGR+F+RNL + + D++ FE +G + +V +P+DK+T
Sbjct: 292 MQRKAQQAAEKDQKLVDQIMESGRLFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQT 351
Query: 375 DKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KG A V+F P HA AY+ DG+ F GR+LHL+P K+
Sbjct: 352 KASKGLAFVSFSDPAHALAAYRAKDGSTFQGRLLHLLPAVNKD 394
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T +L+ F +KG VTDV+L +G R+F F+GY E +AQ ALDYFN T++ +SRI
Sbjct: 13 LTDARLREHFSQKGAVTDVKLMRRPDGTSRKFGFVGYRSEQEAQQALDYFNRTFIDTSRI 72
Query: 89 KVEKCSNLGD 98
+E +GD
Sbjct: 73 SIELAKKIGD 82
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 30/200 (15%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVT 384
++ + ++V+NLS++ T++ LT F A + + + + G+ V
Sbjct: 614 GDEAVDGATLYVKNLSFSTTDERLTAFFHGLSDFAFARIQTKPDPRRPGARLSMGYGFVG 673
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEA 444
F + A A + +DG V L + + R +A + +
Sbjct: 674 FKSIDAARTAQKAMDGKVLDAHTLVV------------------TFARRNAEASTTSISS 715
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKA 498
IL+KNLP+ D++ LF G L V +P G G VE+ +A++
Sbjct: 716 GGSTKILIKNLPFEATKRDIRDLFSSQGQLKSVRLPKKFDNTTRGF-GFVEYSTVREAQS 774
Query: 499 AFNSLAYTKFKEVPLYLEWA 518
A +L +T L L+W+
Sbjct: 775 AMEALKHTHLLGRHLVLQWS 794
>gi|225680707|gb|EEH18991.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb03]
Length = 805
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 183/334 (54%), Gaps = 25/334 (7%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F Q + + ILVKN + DL+ LFE +G++ R+L+PP G +VEF +
Sbjct: 449 LDSFKQREQGNTA--ILVKNFSFSVKAEDLRKLFESYGEIKRLLMPPSGTIAIVEFALAD 506
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+ + AF LAY K + L+LE AP+ +F EK + + +
Sbjct: 507 ECQKAFKGLAYRKLGDSILFLERAPKDLF---------DEKAIATNAVLPAPKVVSQTFS 557
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
D + E DE P +TL+++NLNF++T + F+ S V
Sbjct: 558 TSDTFKAS-------EADENETPLETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKT 610
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K +PK PG+ LSMG+GFV+F T AL + LD+H++ +K S++ ++ A +
Sbjct: 611 KPNPKRPGETLSMGFGFVEFRTSAQARAALATMNGYKLDQHELVIKTSHKAMD--AAEER 668
Query: 675 RKSSNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
R+ N K G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K + RGF F
Sbjct: 669 RREDNAKKLAMRGTKILIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTA--RGFAF 726
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
+FI+ EA+ AM+AL + THL GRRLVLE+A E
Sbjct: 727 ADFISVREAENAMEAL-KHTHLLGRRLVLEFASE 759
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 43/84 (51%), Gaps = 20/84 (23%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ E+GR+FVRNL Y +E DL LF +G + E PE A
Sbjct: 293 LRETGRLFVRNLPYNTSESDLEPLFVSFGKIDEA--------------------NPEAAI 332
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPK 416
QAYQ LDG F GR+LH++P PK
Sbjct: 333 QAYQVLDGKDFEGRLLHILPASPK 356
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 140/363 (38%), Gaps = 86/363 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N S++V +DL KLFE YG + +++P + A+V F + + +A++ L
Sbjct: 462 ILVKNFSFSVKAEDLRKLFESYGEIKRLLMP------PSGTIAIVEFALADECQKAFKGL 515
Query: 399 ------DGTVFLGRML-HLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR--- 448
D +FL R L K + + D F + EA
Sbjct: 516 AYRKLGDSILFLERAPKDLFDEKAIATNAVLPAPKVVSQTFSTSDTF-KASEADENETPL 574
Query: 449 ---IILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPY----GIT-----GLVEFLQKN 494
+ V+NL + T L +F+P RV P G T G VEF
Sbjct: 575 ETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRPGETLSMGFGFVEFRTSA 634
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
QA+AA ++ K + L ++ + + + A EE ++E+ A
Sbjct: 635 QARAALATMNGYKLDQHELVIKTSHKAMDA--------------------AEERRREDNA 674
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
++ +G T + IKNL F +T+ IR F G + SV V +
Sbjct: 675 KKLAMRG-------------------TKILIKNLPFQATKKDIRNLFGAYGKLRSVRVPQ 715
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL----------DEHQIELKRSNR 664
K D + G+ F F + A++ L+++ L E I+ ++ R
Sbjct: 716 KFDRT------ARGFAFADFISVREAENAMEALKHTHLLGRRLVLEFASEEAIDPEKEIR 769
Query: 665 NLE 667
N+E
Sbjct: 770 NIE 772
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
+ + L+ F + VTD + RR F+G+ AQ A+DYFN +Y+ S+I
Sbjct: 17 SNDDLRKHFSIRFQVTDAHVIPK-----RRIGFVGFKTPSLAQDAVDYFNKSYIRMSKIA 71
Query: 90 VEKCSNLGDTTKP---KSWSKY--APDSSAYQKLHN-IAPKQDLK-PEHTKDSKPGKKSK 142
VE + D P KS SK+ + +S++ ++ H+ + KQDLK E+ +P KSK
Sbjct: 72 VEMARPI-DAEPPTVGKSHSKHGTSANSTSLKRKHDQVEQKQDLKLQEYIAAMQPPMKSK 130
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 21/204 (10%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVIL--PIDKETDKT--KGFALVTFLMPE 389
E+ +FVRNL+++ T L ++F+ G L+ + P K +T GF V F
Sbjct: 575 ETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRPGETLSMGFGFVEFRTSA 634
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A A ++G L + K ER+ + + + R +I
Sbjct: 635 QARAALATMNGYKLDQHELVI----------KTSHKAMDAAEERRREDNAKKLAMRGTKI 684
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP-YGIT----GLVEFLQKNQAKAAFNSLA 504
L+KNLP++ D++ LF +G L V VP + T +F+ +A+ A +L
Sbjct: 685 -LIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTARGFAFADFISVREAENAMEALK 743
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKE 528
+T L LE+A E KE
Sbjct: 744 HTHLLGRRLVLEFASEEAIDPEKE 767
>gi|241952837|ref|XP_002419140.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
gi|223642480|emb|CAX42729.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
Length = 846
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 192/362 (53%), Gaps = 18/362 (4%)
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
E +V G V +R +D + + R +IILVKN P+ T ++ LF G L R+L
Sbjct: 465 EAHVIGDVRKYFEDRGVDLTSFDKKERDDKIILVKNFPFGTTIDEIGELFAAHGQLKRML 524
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN 538
+PP G ++EF A+AAF LAY +FK LYLE P+ +F +E N
Sbjct: 525 MPPAGTIAIIEFRDAPSARAAFAKLAYKRFKSSILYLEKGPKDLFT--------REPTTN 576
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIR 598
E E+++ E+ E E ++D E P +++KNLNF +T ++
Sbjct: 577 EI-ASAPEQQQNEHAVEAKISANEILGESKQDDDIESVQGPTVAVFVKNLNFATTVQALS 635
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
FK TV K DPK+ G+ LSMG+GFV+F T+E N A+ L LD H+++
Sbjct: 636 DLFKPLSGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANVAISTLDGHVLDGHKLQ 695
Query: 659 LKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP 718
LK S++ + + +KS +K N+PF+A + ++ ELF AFG+LK VR+P
Sbjct: 696 LKLSHKQGSGASASSVKKSGKSSKIIIK-----NLPFEATRKDLLELFGAFGQLKSVRVP 750
Query: 719 KKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE-ADNVEDIRKRT 777
KK S RGF FVEF EA+ AM L + HL GRRLV+++AE+ A+N E +R
Sbjct: 751 KKFDQSA--RGFAFVEFNLMKEAETAMNQL-EGVHLLGRRLVMQYAEQDAENAEAEIERM 807
Query: 778 NR 779
R
Sbjct: 808 TR 809
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 61/91 (67%)
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
Q + I E+GR+F+RN+SY +E+D KLF +YG L EV + ID T K+KGF V F
Sbjct: 302 QIIQKIEETGRLFIRNISYEASEEDFRKLFSQYGALEEVHIAIDTRTGKSKGFLYVQFSK 361
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
+ AT+AY+ LD +F GR+LH++P K++
Sbjct: 362 KDDATRAYRSLDKQIFQGRLLHILPADQKKD 392
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E+L+ F ++G VTDV+L G+ R+FAFIGY D A+ A+ YFN +++ ++RI
Sbjct: 14 TEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKYFNKSFIDTARID 73
Query: 90 VEKCSNLGDTTKPKSW 105
VE D T P S+
Sbjct: 74 VEFAKTFSDPTVPLSF 89
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 41/199 (20%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-------------PLASVRTTFLGMAYIGFKDEKNCN 272
+ VKNL + L FKPL P S +T +G ++ F+ ++ N
Sbjct: 619 AVFVKNLNFATTVQALSDLFKPLSGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQAN 678
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
A+ S G L+ +K +K H + S +
Sbjct: 679 VAI----STLDGHVLDGHKL---------------------QLKLSHKQGSGASASSVKK 713
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHA 391
+S +I ++NL + T DL +LF +G L V +P K+ D++ +GFA V F + + A
Sbjct: 714 SGKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRVP--KKFDQSARGFAFVEFNLMKEA 771
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A L+G LGR L +
Sbjct: 772 ETAMNQLEGVHLLGRRLVM 790
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 77/194 (39%), Gaps = 34/194 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVIL------PIDKETDKT--KGFALVTFLMPEH 390
+FV+NL++ T L+ LF+ PL+ ++ P K + KT GF V F E
Sbjct: 620 VFVKNLNFATTVQALSDLFK---PLSGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQ 676
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
A A LDG V G L L K +G+ ++ I
Sbjct: 677 ANVAISTLDGHVLDGHKLQL---KLSHKQGSGASASSVK-------------KSGKSSKI 720
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLA 504
++KNLP+ DL LF FG L V VP G VEF +A+ A N L
Sbjct: 721 IIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGF-AFVEFNLMKEAETAMNQLE 779
Query: 505 YTKFKEVPLYLEWA 518
L +++A
Sbjct: 780 GVHLLGRRLVMQYA 793
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+TG ++ +RNI ++A + + +LF +G L+ V + +G +GF +V+F K++A
Sbjct: 309 ETG-RLFIRNISYEASEEDFRKLFSQYGALEEVHIAID-TRTGKSKGFLYVQFSKKDDAT 366
Query: 743 RAMKALCQSTHLYGRRL 759
RA ++L + GR L
Sbjct: 367 RAYRSLDKQI-FQGRLL 382
>gi|255941010|ref|XP_002561274.1| Pc16g09620 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585897|emb|CAP93632.1| Pc16g09620 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 835
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 184/335 (54%), Gaps = 31/335 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
+DAF Q R ILVKN Y +L++LF+P+G + R+L+PP G +VEF Q +
Sbjct: 484 IDAFKQ--RERGNTAILVKNFSYGVTSAELRSLFDPYGKIIRLLMPPSGTIAIVEFAQPD 541
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF +AY K + L+LE AP+ +F + S E G++
Sbjct: 542 EAQKAFKGMAYRKLGDSILFLEKAPKNLF----DGSAAPRALAPETRGKD---------- 587
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
QG + DE + TTL++KNLNF++T + F+ + +
Sbjct: 588 -----QGF-STADTFAADEPDDSVGTTTLFVKNLNFSTTNEKFLEVFRPLDGFITGRIKT 641
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+ F F T+ AL + LD+H++ ++ S++ ++ +
Sbjct: 642 KPDPKRPGQTLSMGFAFADFKTKAQAQAALAAMNGYKLDQHELLVRASHKGKDAAE---E 698
Query: 675 RKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
R+ + AK+ +KI+++N+PFQA + ++ LF A+G+L+ VR+P+K S RGFG
Sbjct: 699 RRREDTAKKVAARRTKIIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQKFDHSA--RGFG 756
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
F +F++ EA+ AM AL ++THL GRRLVLE+ E
Sbjct: 757 FADFVSAREAENAMDAL-KNTHLLGRRLVLEFVNE 790
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I S R+F+RNL+Y TE DL +FE++G + E+ + D + +KGFA V + + A
Sbjct: 308 IRNSARLFLRNLAYDTTESDLQPIFERFGKIEEIHVAFDTRSTTSKGFAYVQYCDADAAV 367
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN 418
AYQ LDG F GR+LH++P K+
Sbjct: 368 DAYQTLDGKHFQGRLLHILPASAKKT 393
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 132/334 (39%), Gaps = 72/334 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N SY VT +L LF+ YG + +++P + A+V F P+ A +A++ +
Sbjct: 497 ILVKNFSYGVTSAELRSLFDPYGKIIRLLMP------PSGTIAIVEFAQPDEAQKAFKGM 550
Query: 399 ------DGTVFLGRML-HLIPGK--PKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
D +FL + +L G P+ GK S A ++ ++
Sbjct: 551 AYRKLGDSILFLEKAPKNLFDGSAAPRALAPETRGKDQ-GFSTADTFAADEPDDSVGTTT 609
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPP----YGIT-----GLVEFLQKNQAKA 498
+ VKNL + T +F P GR+ P G T +F K QA+A
Sbjct: 610 LFVKNLNFSTTNEKFLEVFRPLDGFITGRIKTKPDPKRPGQTLSMGFAFADFKTKAQAQA 669
Query: 499 AFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDN 558
A ++ K + L + + KGK+ EE ++E+TA++
Sbjct: 670 ALAAMNGYKLDQHELLV-----------RASHKGKDA---------AEERRREDTAKKVA 709
Query: 559 QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
+ T + IKNL F +T+ IR F G + SV V +K D
Sbjct: 710 AR-------------------RTKIIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQKFD- 749
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+ G+GF F + A+ L+N+ L
Sbjct: 750 -----HSARGFGFADFVSAREAENAMDALKNTHL 778
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 126/338 (37%), Gaps = 78/338 (23%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL---------PLASV-----------RTTFLGMA 261
R I+VKN GV +L++ F P P ++ + F GMA
Sbjct: 492 RGNTAILVKNFSYGVTSAELRSLFDPYGKIIRLLMPPSGTIAIVEFAQPDEAQKAFKGMA 551
Query: 262 YIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWK 321
Y + L + F + N++ D SA A + A +
Sbjct: 552 Y----------RKLGDSILFLEKAPKNLF----DGSAAPRALAPETRGKDQGFSTADTFA 597
Query: 322 SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL------PIDKETD 375
+ E +D + +FV+NL+++ T + K E + PL I P K
Sbjct: 598 ADE-----PDDSVGTTTLFVKNLNFSTTNE---KFLEVFRPLDGFITGRIKTKPDPKRPG 649
Query: 376 KT--KGFALVTFLMPEHATQAYQHLDGTV-----FLGRMLHLIPGKPKENEGNVDGKVHC 428
+T GFA F A A ++G L R H GK E
Sbjct: 650 QTLSMGFAFADFKTKAQAQAALAAMNGYKLDQHELLVRASH--KGKDAAEE--------- 698
Query: 429 CISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PY 482
R+ D +V R+K I++KNLP++ D+++LF +G L V VP
Sbjct: 699 ---RRREDTAKKVAARRTK--IIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQKFDHSAR 753
Query: 483 GITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPE 520
G G +F+ +A+ A ++L T L LE+ E
Sbjct: 754 GF-GFADFVSAREAENAMDALKNTHLLGRRLVLEFVNE 790
>gi|68468327|ref|XP_721723.1| hypothetical protein CaO19.1646 [Candida albicans SC5314]
gi|74680318|sp|Q5AJS6.1|MRD1_CANAL RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|46443655|gb|EAL02935.1| hypothetical protein CaO19.1646 [Candida albicans SC5314]
Length = 841
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 190/349 (54%), Gaps = 19/349 (5%)
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
E +V G V +R +D + + R +IILVKN P+ T ++ LF +G L R+L
Sbjct: 464 EAHVIGDVRKYFEDRGVDLTSFDKKERDDKIILVKNFPFGTTIDEIGELFSAYGQLKRML 523
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN 538
+PP G ++EF A+AAF+ LAY +FK LYLE P+ +F +E
Sbjct: 524 MPPAGTIAIIEFRDAPSARAAFSKLAYKRFKSSILYLEKGPKDLFT----------REPT 573
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDE-EREPEPDTTLYIKNLNFNSTEDSI 597
E E+++ A E + E+ E+DE E P +++KNLNF +T ++
Sbjct: 574 TNEVATIPEQQQNEHAVEAKISANEILGESKEDDEIESVQGPTVAVFVKNLNFATTVQAL 633
Query: 598 RRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQI 657
FK TV K DPK+ G+ LSMG+GFV+F T+E N A+ L LD H++
Sbjct: 634 SDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANVAISTLDGHVLDGHKL 693
Query: 658 ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
+LK S++ T SS SKI+++N+PF+A + ++ ELF AFG+LK VR+
Sbjct: 694 QLKLSHKQ-----GTGTSASSIKKSGKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRV 748
Query: 718 PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
PKK S RGF FVEF EA+ AM L + HL GRRLV+++AE+
Sbjct: 749 PKKFDQSA--RGFAFVEFNLMKEAETAMSQL-EGVHLLGRRLVMQYAEQ 794
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%)
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
Q A+ I E+GR+F+RN+SY +E+D LF +YG L EV + ID T K+KGF V FL
Sbjct: 301 QIAQKIEETGRLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLK 360
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
E AT+AY+ LD +F GR+LH++P K++
Sbjct: 361 KEDATRAYRSLDKQIFQGRLLHILPADKKKD 391
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E+L+ F ++G VTDV+L G+ R+FAFIGY D A+ A+ YFN +++ ++RI+
Sbjct: 14 TEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKYFNKSFIDTARIE 73
Query: 90 VEKCSNLGDTTKPKSW 105
VE D T P S+
Sbjct: 74 VEFAKTFSDPTVPLSF 89
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 41/198 (20%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCNK 273
+ VKNL + L FKPLP +A+V+T +G ++ F+ ++ N
Sbjct: 619 VFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANV 678
Query: 274 ALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI 333
A+ S G L+ +K +K H + S +
Sbjct: 679 AI----STLDGHVLDGHKL---------------------QLKLSHKQGTGTSASSIKKS 713
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHAT 392
+S +I ++NL + T DL +LF +G L V +P K+ D++ +GFA V F + + A
Sbjct: 714 GKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRVP--KKFDQSARGFAFVEFNLMKEAE 771
Query: 393 QAYQHLDGTVFLGRMLHL 410
A L+G LGR L +
Sbjct: 772 TAMSQLEGVHLLGRRLVM 789
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 77/199 (38%), Gaps = 44/199 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N + T D++ +LF YG L +++P A++ F A A+ L
Sbjct: 495 ILVKNFPFGTTIDEIGELFSAYGQLKRMLMP------PAGTIAIIEFRDAPSARAAFSKL 548
Query: 399 DGTVFLGRMLHLIPG------------------KPKENEGNVDGKVHC--CISERKLDAF 438
F +L+L G + ++NE V+ K+ + E K D
Sbjct: 549 AYKRFKSSILYLEKGPKDLFTREPTTNEVATIPEQQQNEHAVEAKISANEILGESKEDDE 608
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGI 484
+ V+ + + VKNL + T L LF+P G+ L +
Sbjct: 609 IESVQGPT-VAVFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGF-- 665
Query: 485 TGLVEFLQKNQAKAAFNSL 503
G VEF K QA A ++L
Sbjct: 666 -GFVEFRTKEQANVAISTL 683
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 83/215 (38%), Gaps = 37/215 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVIL------PIDKETDKT--KGFALVTFLMPEH 390
+FV+NL++ T L+ LF+ PL ++ P K + KT GF V F E
Sbjct: 619 VFVKNLNFATTVQALSDLFK---PLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQ 675
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
A A LDG V G L L K +G ++ I
Sbjct: 676 ANVAISTLDGHVLDGHKLQL---KLSHKQGTGTSASSIK-------------KSGKSSKI 719
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLA 504
++KNLP+ DL LF FG L V VP G VEF +A+ A + L
Sbjct: 720 IIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGF-AFVEFNLMKEAETAMSQLE 778
Query: 505 YTKF---KEVPLYLEWAPEGVFAEAKEKSKGKEKE 536
+ V Y E PE E + +K +K+
Sbjct: 779 GVHLLGRRLVMQYAEQDPENAEVEIERMTKKVKKQ 813
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+TG ++ +RNI ++A + + LF +G L+ V + +G +GF +V+F+ K +A
Sbjct: 308 ETG-RLFIRNISYEASEEDFRSLFSQYGALEEVHIAID-TRTGKSKGFLYVQFLKKEDAT 365
Query: 743 RAMKALCQSTHLYGRRL 759
RA ++L + GR L
Sbjct: 366 RAYRSLDKQI-FQGRLL 381
>gi|60416093|gb|AAH90711.1| Rbm19 protein, partial [Danio rerio]
Length = 802
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 154/235 (65%), Gaps = 20/235 (8%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKNLP DL+ALF P G LGRVL+PP G+T +VEFL+
Sbjct: 572 LDSFSQASGERSKCVILVKNLPSGVQVADLEALFSPHGSLGRVLLPPSGLTAIVEFLEPT 631
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE-AKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+AK AF LAYTKF+ VPLYLEWAP VF + + + + KEK+ + + + E++E
Sbjct: 632 EAKRAFMKLAYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKNDSVQNEEEEEE 691
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
EED+Q P +TL+IKNLNF ++E+++++ F KCG + S T++
Sbjct: 692 EEEDDQ-----------------ILPGSTLFIKNLNFITSEETLQKTFSKCGVVKSCTIS 734
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES 668
+K+D G+ LSMGYGFVQ+ T E+ +A++ LQ+ ++DEHQ+E+K S R ++S
Sbjct: 735 KKRD--KAGKLLSMGYGFVQYKTPEAAQKAMRQLQHCTVDEHQLEVKISEREVKS 787
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 114/202 (56%), Gaps = 15/202 (7%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRTT------FLGMAYIGFKDEKNCNKALNKNK 279
T+ ++ P VK++ +K + PL ++R G Y+ + E +AL +K
Sbjct: 291 TVKLRGAPFNVKEQQVKEFMMPLKPVAIRFAKNSDGRNSGYVYVDLRSEAEVERALRLDK 350
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
+ G+ + +++ + + + S + ME K++ + + ED+AESGR+
Sbjct: 351 DYMGGRYIEVFRANNFKNDRRSA-----KRSEME----KNFVRELKDDEEEEDVAESGRL 401
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
F+RN+ YT TE+DL ++F K+GPL+EV+ PID T K KGFA VT+++PE+A A LD
Sbjct: 402 FIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALAQLD 461
Query: 400 GTVFLGRMLHLIPGKPKENEGN 421
G F GR+LH++ + K+ + +
Sbjct: 462 GHTFQGRVLHVMASRLKKEKAD 483
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 57/86 (66%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++ + F + GT+TD LK+T +GKFR+F F+G+ E+ AQ AL +FN ++V +SR+
Sbjct: 13 MKEDRFRKMFADFGTLTDCALKFTKDGKFRKFGFVGFKTEEDAQKALKHFNKSFVDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSA 114
VE C+ GD K + WSK+ S+
Sbjct: 73 TVELCTEFGDPNKARPWSKHTRQPSS 98
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 24/193 (12%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGM-AYIGFKDEKNCNKALNKNK 279
R I+VKNLP+GV+ DL+A F P L V G+ A + F + +A K
Sbjct: 582 RSKCVILVKNLPSGVQVADLEALFSPHGSLGRVLLPPSGLTAIVEFLEPTEAKRAFMK-L 640
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQ---------FA 330
++ K + + +Y + + +A + E K+ DSVQ
Sbjct: 641 AYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKN-----DSVQNEEEEEEEEED 695
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTF 385
+ I +F++NL++ +E+ L K F K G + I K+ DK + G+ V +
Sbjct: 696 DQILPGSTLFIKNLNFITSEETLQKTFSKCGVVKSCT--ISKKRDKAGKLLSMGYGFVQY 753
Query: 386 LMPEHATQAYQHL 398
PE A +A + L
Sbjct: 754 KTPEAAQKAMRQL 766
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP + T+ ++ FN E ++ P+A + A+ D ++ G Y +V
Sbjct: 285 EPTTEFTVKLRGAPFNVKEQQVKEFMMPLKPVA-IRFAKNSDGRNSG------YVYVDLR 337
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS--SNVAKQT--------- 684
+ + +AL+ L + IE+ R+N N +++ + KR N ++
Sbjct: 338 SEAEVERALR-LDKDYMGGRYIEVFRAN-NFKNDRRSAKRSEMEKNFVRELKDDEEEEDV 395
Query: 685 --GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
++ +RN+P+ + +++E+F G L V P + + +GF FV ++ A
Sbjct: 396 AESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSL-TKKPKGFAFVTYMIPENAV 454
Query: 743 RAMKALCQST------HLYGRRLVLEWAEEA 767
A+ L T H+ RL E A++
Sbjct: 455 SALAQLDGHTFQGRVLHVMASRLKKEKADQG 485
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 651 SLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFG 710
+L E QI ++ + + L ++ S +++ ILV+N+P + +++E LF G
Sbjct: 551 ALGETQI-VQETRQFLLDNGVSLDSFSQASGERSKCVILVKNLPSGVQVADLEALFSPHG 609
Query: 711 ELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
L V LP SGL VEF+ EAKRA L T L LEWA
Sbjct: 610 SLGRVLLPP----SGLT---AIVEFLEPTEAKRAFMKLAY-TKFQHVPLYLEWA 655
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ ++F FG L L K G R FGFV F T+ +A++A+
Sbjct: 2 SRLIVKNLPNGMKEDRFRKMFADFGTLTDCAL--KFTKDGKFRKFGFVGFKTEEDAQKAL 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKNEAK 742
GS + ++N+ F + +++ F G +K + KK +G L G+GFV++ T A+
Sbjct: 701 GSTLFIKNLNFITSEETLQKTFSKCGVVKSCTISKKRDKAGKLLSMGYGFVQYKTPEAAQ 760
Query: 743 RAMKALCQST 752
+AM+ L T
Sbjct: 761 KAMRQLQHCT 770
>gi|149241847|ref|XP_001526367.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450490|gb|EDK44746.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 868
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 208/386 (53%), Gaps = 30/386 (7%)
Query: 419 EGNVDGKVHCCISERKLD--AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGR 476
E +V G V ++ +D +FN+ + R +IILVKN Y T +L LF +G + R
Sbjct: 467 EAHVIGDVKKFFEDKGVDLTSFNK--KERDDKIILVKNFTYGTTTEELGELFSQYGPIAR 524
Query: 477 VLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKE 536
+++PP G +VEF A+AAF LAY +F LYLE P+ +F A + +E
Sbjct: 525 IIMPPAGTIAIVEFKDAPSARAAFTKLAYKRFNSSILYLEKGPKDLFTRA--PTTAEEAS 582
Query: 537 KNEEEGEEGEEEKKENTAEEDNQQGVPEVE---------ENVEEDEEREPEPDT-TLYIK 586
N G + + Q V VE +++++ E+ + T ++++K
Sbjct: 583 LNVGIGADTAGTAGVAGVAGNISQPVKAVEVISANDILGQDIDDTEDGDIHGSTVSIFVK 642
Query: 587 NLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKV 646
NLNF++T + FK TV K DPK+ G+ LSMG+GFV+F ++ + A+
Sbjct: 643 NLNFSTTVQQLSDLFKPLSGFVLATVKTKPDPKNTGKTLSMGFGFVEFRSKAQADAAIAA 702
Query: 647 LQNSSLDEHQIELKRSNRNL----ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
L LD H+++LK S++ +S AT V ++ K +KI+++N+PF+A + ++
Sbjct: 703 LDGHVLDGHKLQLKISHKQSGGAKDSRATAVGSAAAKSGK--SNKIIIKNLPFEATRKDL 760
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
ELF AFG LK VR+PKK S RGF F+EF EA+ AM L + HL GRRLV++
Sbjct: 761 LELFGAFGSLKSVRVPKKFDQSA--RGFAFIEFNLLKEAENAMTQL-EGVHLLGRRLVMQ 817
Query: 763 WAE-EADN----VEDIRKRTNRYFGT 783
+AE +ADN +E + K+ + GT
Sbjct: 818 YAERDADNAEAEIERMTKKVKKQVGT 843
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E + ++GR+F+RN+ Y TEDD +LF YG L EV + ID T K+KGF + F+ P+
Sbjct: 307 EKLQDTGRLFIRNILYEATEDDFRELFLPYGALEEVHIAIDTRTSKSKGFVYIQFVNPQD 366
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A +AY LD +F GR+LH++ K++
Sbjct: 367 AVRAYSSLDKEIFQGRLLHILAADRKKS 394
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T++ L+ F E+G VTDV+L + G+ RRFAFIGY + A+ A+ +FN +++ ++RI
Sbjct: 14 TEDNLRKHFGEQGDVTDVKLVKSKNGESRRFAFIGYKSRESAEKAVKFFNKSFLDTARID 73
Query: 90 VEKCSNLGDTTKPKSW-SKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG----KKSKND 144
VE D P S+ K D+ ++ +Q+ ++ K KP ++ +ND
Sbjct: 74 VEIAKTFSDPNVPISFREKRKRDNERLRRQEEALIEQNEMAKNVKRQKPKSAIEEEMEND 133
Query: 145 PTFSDFLQL 153
P F +++++
Sbjct: 134 PKFREYMEV 142
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 44/204 (21%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRTTFLGMAYIGFKDEKNCNKALNKNKSF- 281
+I VKNL + L FKPL LA+V+T D KN K L+ F
Sbjct: 638 SIFVKNLNFSTTVQQLSDLFKPLSGFVLATVKTK---------PDPKNTGKTLSMGFGFV 688
Query: 282 --------------WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSV 327
G L+ +K S K SG A D+ ++ + AK KS
Sbjct: 689 EFRSKAQADAAIAALDGHVLDGHKLQLKISHKQSGGAKDSRATAVGSAAAKSGKSN---- 744
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFL 386
+I ++NL + T DL +LF +G L V +P K+ D++ +GFA + F
Sbjct: 745 ----------KIIIKNLPFEATRKDLLELFGAFGSLKSVRVP--KKFDQSARGFAFIEFN 792
Query: 387 MPEHATQAYQHLDGTVFLGRMLHL 410
+ + A A L+G LGR L +
Sbjct: 793 LLKEAENAMTQLEGVHLLGRRLVM 816
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 116/298 (38%), Gaps = 53/298 (17%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-MAYIGFKDEKNCNKALNK-- 277
R I+VKN G ++L F P+A + G +A + FKD + A K
Sbjct: 493 RDDKIILVKNFTYGTTTEELGELFSQYGPIARIIMPPAGTIAIVEFKDAPSARAAFTKLA 552
Query: 278 NKSFWKGKQLNIYKYSKD--------------------NSAKYSGAADDNNNASMENIKA 317
K F L + K KD ++A +G A N S + +KA
Sbjct: 553 YKRF-NSSILYLEKGPKDLFTRAPTTAEEASLNVGIGADTAGTAGVAGVAGNIS-QPVKA 610
Query: 318 KHWKSQEDSVQFAEDIAESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-- 368
S D + D E G IFV+NL+++ T L+ LF+ PL+ +L
Sbjct: 611 VEVISANDILGQDIDDTEDGDIHGSTVSIFVKNLNFSTTVQQLSDLFK---PLSGFVLAT 667
Query: 369 ----PIDKETDKT--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNV 422
P K T KT GF V F A A LDG V G L L K++ G
Sbjct: 668 VKTKPDPKNTGKTLSMGFGFVEFRSKAQADAAIAALDGHVLDGHKLQLKISH-KQSGGAK 726
Query: 423 DGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP 480
D + S +S +II +KNLP+ DL LF FG L V VP
Sbjct: 727 DSRATAVGSA-------AAKSGKSNKII-IKNLPFEATRKDLLELFGAFGSLKSVRVP 776
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+ L +K L TED++R+HF + G + V + + K+ + S + F+ + +RES
Sbjct: 2 SRLIVKGLPKYFTEDNLRKHFGEQGDVTDVKLVKSKNGE------SRRFAFIGYKSRESA 55
Query: 641 NQALKVLQNSSLDEHQIEL 659
+A+K S LD +I++
Sbjct: 56 EKAVKFFNKSFLDTARIDV 74
>gi|238880627|gb|EEQ44265.1| multiple RNA-binding domain-containing protein 1 [Candida albicans
WO-1]
Length = 845
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 194/355 (54%), Gaps = 20/355 (5%)
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
E +V G V +R +D + + R +IILVKN P+ T ++ LF +G L R+L
Sbjct: 464 EAHVIGDVRKYFEDRGVDLTSFDKKERDDKIILVKNFPFGTTIDEIGELFSAYGQLKRML 523
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN 538
+PP G ++EF A+AAF+ LAY +FK LYLE P+ +F +E
Sbjct: 524 MPPAGTIAIIEFRDAPSARAAFSKLAYKRFKSSILYLEKGPKDLFT----------REPT 573
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDE-EREPEPDTTLYIKNLNFNSTEDSI 597
E E+++ A E + E+ ++DE E P +++KNLNF +T ++
Sbjct: 574 TNEVATIPEQQQNEHAVEAKISANEILGESKKDDEIESVQGPTVAVFVKNLNFATTVQAL 633
Query: 598 RRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQI 657
FK TV K DPK+ G+ LSMG+GFV+F T+E N A+ L LD H++
Sbjct: 634 SDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANVAISTLDGHVLDGHKL 693
Query: 658 ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
+LK S++ T SS SKI+++N+PF+A + ++ ELF AFG+LK VR+
Sbjct: 694 QLKLSHKQ-----GTGTSASSIKKSGKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRV 748
Query: 718 PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE-ADNVE 771
PKK S RGF FVEF EA+ AM L + HL GRRLV+++AE+ A+N E
Sbjct: 749 PKKFDQSA--RGFAFVEFNLMKEAETAMSQL-EGVHLLGRRLVMQYAEQDAENAE 800
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%)
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
Q A+ I E+GR+F+RN+SY +E+D LF +YG L EV + ID T K+KGF V FL
Sbjct: 301 QIAQKIEETGRLFIRNISYEASEEDFRNLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLK 360
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
E AT+AY+ LD +F GR+LH++P K++
Sbjct: 361 KEDATRAYRSLDKQIFQGRLLHILPADKKKD 391
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E+L+ F ++G VTDV+L G+ R+FAFIGY D A+ A+ YFN +++ ++RI+
Sbjct: 14 TEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKYFNKSFIDTARIE 73
Query: 90 VEKCSNLGDTTKPKSW 105
VE D T P S+
Sbjct: 74 VEFAKTFSDPTVPLSF 89
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 41/198 (20%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLP---LASVRT----------TFLGMAYIGFKDEKNCNK 273
+ VKNL + L FKPLP +A+V+T +G ++ F+ ++ N
Sbjct: 619 VFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANV 678
Query: 274 ALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI 333
A+ S G L+ +K +K H + S +
Sbjct: 679 AI----STLDGHVLDGHKL---------------------QLKLSHKQGTGTSASSIKKS 713
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHAT 392
+S +I ++NL + T DL +LF +G L V +P K+ D++ +GFA V F + + A
Sbjct: 714 GKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRVP--KKFDQSARGFAFVEFNLMKEAE 771
Query: 393 QAYQHLDGTVFLGRMLHL 410
A L+G LGR L +
Sbjct: 772 TAMSQLEGVHLLGRRLVM 789
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 77/199 (38%), Gaps = 44/199 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N + T D++ +LF YG L +++P A++ F A A+ L
Sbjct: 495 ILVKNFPFGTTIDEIGELFSAYGQLKRMLMP------PAGTIAIIEFRDAPSARAAFSKL 548
Query: 399 DGTVFLGRMLHLIPG------------------KPKENEGNVDGKVHC--CISERKLDAF 438
F +L+L G + ++NE V+ K+ + E K D
Sbjct: 549 AYKRFKSSILYLEKGPKDLFTREPTTNEVATIPEQQQNEHAVEAKISANEILGESKKDDE 608
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGI 484
+ V+ + + VKNL + T L LF+P G+ L +
Sbjct: 609 IESVQGPT-VAVFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGF-- 665
Query: 485 TGLVEFLQKNQAKAAFNSL 503
G VEF K QA A ++L
Sbjct: 666 -GFVEFRTKEQANVAISTL 683
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 75/194 (38%), Gaps = 34/194 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVIL------PIDKETDKT--KGFALVTFLMPEH 390
+FV+NL++ T L+ LF+ PL ++ P K + KT GF V F E
Sbjct: 619 VFVKNLNFATTVQALSDLFK---PLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQ 675
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
A A LDG V G L L K +G ++ I
Sbjct: 676 ANVAISTLDGHVLDGHKLQL---KLSHKQGTGTSASSIK-------------KSGKSSKI 719
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLA 504
++KNLP+ DL LF FG L V VP G VEF +A+ A + L
Sbjct: 720 IIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGF-AFVEFNLMKEAETAMSQLE 778
Query: 505 YTKFKEVPLYLEWA 518
L +++A
Sbjct: 779 GVHLLGRRLVMQYA 792
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+TG ++ +RNI ++A + + LF +G L+ V + +G +GF +V+F+ K +A
Sbjct: 308 ETG-RLFIRNISYEASEEDFRNLFSQYGALEEVHIAID-TRTGKSKGFLYVQFLKKEDAT 365
Query: 743 RAMKALCQSTHLYGRRL 759
RA ++L + GR L
Sbjct: 366 RAYRSLDKQI-FQGRLL 381
>gi|367015674|ref|XP_003682336.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
gi|359749998|emb|CCE93125.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
Length = 855
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 194/359 (54%), Gaps = 18/359 (5%)
Query: 419 EGNVDGKVHCCISERKLDA--FNQVVEA--RSKRIILVKNLPYRTLPTDLKALFEPFGDL 474
E +V G V + +D F Q+ A R R+ILVKN P+ T +L LF PFG L
Sbjct: 467 EAHVIGDVRKYFESKGVDLTKFGQLKNADQRDNRVILVKNFPFGTTIEELGDLFLPFGKL 526
Query: 475 GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE 534
R L+PP G ++++ A+AAF LAY +FK+ +YLE P+ F + E + +
Sbjct: 527 ERFLMPPAGTIAIIQYRDVTSARAAFTKLAYKRFKDGIIYLEMGPKDCFTRSAESDETLD 586
Query: 535 KEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTE 594
+ EE + E E + E + + + +E+ +D P +++IKNLNF++
Sbjct: 587 SQSGEEPKDVKEIEPSSHDLME--AKDLSKTDEDTLDDS--IDGPTVSIFIKNLNFSTNS 642
Query: 595 DSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDE 654
+ F+ V K DPK+ + LSMG+GF +F T+E + + + L+
Sbjct: 643 QQLTEVFRPFTGFVVAQVKTKPDPKNKDKTLSMGFGFAEFRTKEQALAVISAVDGTVLNG 702
Query: 655 HQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKF 714
H+++LK S+R +S + + KI+V+N+PF+A + ++ ELF +FG LK
Sbjct: 703 HRLQLKISHR------AGASSNTSKSSSKKSGKIIVKNLPFEATRKDIFELFSSFGHLKS 756
Query: 715 VRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVED 772
VR+PKK S RGF FVEF+ EA+ AM L Q HL GRRLV+++AE E+++ ED
Sbjct: 757 VRVPKKFDKSA--RGFAFVEFLLPKEAENAMDQL-QGVHLLGRRLVMQYAEQESEDAED 812
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 321 KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGF 380
K+ ED E I +GR+F+RN+ Y+ TE D +LF YG L EV + +D T K+KGF
Sbjct: 299 KTDEDKAM--EQICRTGRLFLRNILYSSTEQDFRQLFSPYGELEEVHIALDTRTGKSKGF 356
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A V F + A +AY LD +F GR+LH++P K++
Sbjct: 357 AYVLFKNSKDAAEAYIALDKQIFQGRLLHILPADAKKD 394
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 130/331 (39%), Gaps = 56/331 (16%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKALN 276
+R I+VKN P G ++L F LP + + +A I ++D + A
Sbjct: 496 QRDNRVILVKNFPFGTTIEELGDLF--LPFGKLERFLMPPAGTIAIIQYRDVTSARAAFT 553
Query: 277 KNKSFWKGKQLNIY-----KYSKDNSAKYSGAADDNNNASMENIK-----------AKHW 320
K ++ + K IY K SA+ D + +++K AK
Sbjct: 554 K-LAYKRFKDGIIYLEMGPKDCFTRSAESDETLDSQSGEEPKDVKEIEPSSHDLMEAKDL 612
Query: 321 -KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGP--LAEV-ILPIDKETDK 376
K+ ED++ + D + IF++NL+++ LT++F + +A+V P K DK
Sbjct: 613 SKTDEDTLDDSID-GPTVSIFIKNLNFSTNSQQLTEVFRPFTGFVVAQVKTKPDPKNKDK 671
Query: 377 T--KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERK 434
T GF F E A +DGTV G L L IS R
Sbjct: 672 TLSMGFGFAEFRTKEQALAVISAVDGTVLNGHRLQL------------------KISHRA 713
Query: 435 -LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGL 487
+ ++ I+VKNLP+ D+ LF FG L V VP G
Sbjct: 714 GASSNTSKSSSKKSGKIIVKNLPFEATRKDIFELFSSFGHLKSVRVPKKFDKSARGF-AF 772
Query: 488 VEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
VEFL +A+ A + L L +++A
Sbjct: 773 VEFLLPKEAENAMDQLQGVHLLGRRLVMQYA 803
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TDV++ +G+ RRFAFIGY E+ A A++YF+ +++ +S+I+V + D PK
Sbjct: 40 ITDVKILKDRDGQSRRFAFIGYRSEEDAFDAVNYFDGSFINTSKIEVAMAKSFADPRVPK 99
Query: 104 SW 105
S
Sbjct: 100 SM 101
>gi|354545488|emb|CCE42216.1| hypothetical protein CPAR2_807650 [Candida parapsilosis]
Length = 819
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 194/370 (52%), Gaps = 27/370 (7%)
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
E +V G V +R +D + + + ++ILVKN + T L LF +G + R++
Sbjct: 448 EAHVIGDVRKFFEDRGVDLASFSKKEKDDKVILVKNFSFGTTVEQLGELFSQYGQIKRII 507
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN 538
+PP G +VEF A+AAF LAY +F LYLE P+ +F +E +N
Sbjct: 508 MPPSGTIAIVEFNDAPSARAAFTKLAYKRFGSSILYLEKGPKDLFT--------REPVEN 559
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIR 598
E E E + G PEVEE + P ++++KNLNF++T +
Sbjct: 560 ESIRVSQSESVVEAKVSASDILGEPEVEEEEIQG------PTVSVFVKNLNFSTTVQQLS 613
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
FK TV K DPK+ G+ LSMG+GFV+F + N A+ L LD H+++
Sbjct: 614 DLFKPLHGFVLATVKTKPDPKNTGKTLSMGFGFVEFKSLAQANAAIATLDGHVLDGHKLQ 673
Query: 659 LKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP 718
LK S++ + ++T KSS SKI+++N+PF+ + ++ ELF AFG+LK VR+P
Sbjct: 674 LKISHKQGSAASSTAPSKSSKT-----SKIIIKNLPFETSRKDILELFGAFGQLKSVRVP 728
Query: 719 KKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD-----NVEDI 773
KK S RGF FVEF E + AMK L + HL GRRLV+++AE+ +E +
Sbjct: 729 KKFDQSA--RGFAFVEFNLLKETENAMKQL-EGVHLLGRRLVMQYAEQDSEDAEAEIEKM 785
Query: 774 RKRTNRYFGT 783
K+ + GT
Sbjct: 786 TKKVKKQVGT 795
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
A+H KS+E+ + + I E+GR+F+RN+SY TEDD LFEKYGPL EV + +D T K
Sbjct: 277 AEH-KSEEEKAK--DKIEETGRLFIRNISYEATEDDFKHLFEKYGPLEEVHIAVDTRTGK 333
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
+KGF + F+ E A A++ LD +F GR+LH++ K++
Sbjct: 334 SKGFVYIQFVNTEDAVNAFEALDKQIFQGRLLHILAADQKKS 375
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T++ LK F ++G VTDV+L + G+ RRFAFIGY +D AQ A+ +FN +++ +SRI
Sbjct: 14 TEDNLKKHFSQQGDVTDVKLVKSKNGESRRFAFIGYKSDDAAQKAVKFFNKSFIDTSRID 73
Query: 90 VEKCSNLGDTTKPKSW 105
V+ + D P S+
Sbjct: 74 VQLAKSFSDPDVPISF 89
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 66/152 (43%), Gaps = 31/152 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVIL------PIDKETDKT--KGFALVTFLMPEH 390
+FV+NL+++ T L+ LF+ PL +L P K T KT GF V F
Sbjct: 598 VFVKNLNFSTTVQQLSDLFK---PLHGFVLATVKTKPDPKNTGKTLSMGFGFVEFKSLAQ 654
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI- 449
A A LDG V G L L IS ++ A + ++S +
Sbjct: 655 ANAAIATLDGHVLDGHKLQL------------------KISHKQGSAASSTAPSKSSKTS 696
Query: 450 -ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP 480
I++KNLP+ T D+ LF FG L V VP
Sbjct: 697 KIIIKNLPFETSRKDILELFGAFGQLKSVRVP 728
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 25/191 (13%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL---PLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFW 282
++ VKNL + L FKPL LA+V+T D KN K L+ F
Sbjct: 597 SVFVKNLNFSTTVQQLSDLFKPLHGFVLATVKTK---------PDPKNTGKTLSMGFGFV 647
Query: 283 KGKQLNIYKYSKDNSA--KYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIF 340
+ K L ++ N+A G D + + K H + S +++ +I
Sbjct: 648 EFKSL-----AQANAAIATLDGHVLDGHKLQL---KISHKQGSAASSTAPSKSSKTSKII 699
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQAYQHLD 399
++NL + + D+ +LF +G L V +P K+ D++ +GFA V F + + A + L+
Sbjct: 700 IKNLPFETSRKDILELFGAFGQLKSVRVP--KKFDQSARGFAFVEFNLLKETENAMKQLE 757
Query: 400 GTVFLGRMLHL 410
G LGR L +
Sbjct: 758 GVHLLGRRLVM 768
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 33/191 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N S+ T + L +LF +YG + +I+P + A+V F A A+ L
Sbjct: 479 ILVKNFSFGTTVEQLGELFSQYGQIKRIIMP------PSGTIAIVEFNDAPSARAAFTKL 532
Query: 399 DGTVFLGRMLHLIPG-------KPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-- 449
F +L+L G +P ENE ++ + E K+ A + + E +
Sbjct: 533 AYKRFGSSILYLEKGPKDLFTREPVENE-SIRVSQSESVVEAKVSASDILGEPEVEEEEI 591
Query: 450 ------ILVKNLPYRTLPTDLKALFEPFGD--LGRVLVPP----YGIT-----GLVEFLQ 492
+ VKNL + T L LF+P L V P G T G VEF
Sbjct: 592 QGPTVSVFVKNLNFSTTVQQLSDLFKPLHGFVLATVKTKPDPKNTGKTLSMGFGFVEFKS 651
Query: 493 KNQAKAAFNSL 503
QA AA +L
Sbjct: 652 LAQANAAIATL 662
>gi|367052423|ref|XP_003656590.1| hypothetical protein THITE_135180 [Thielavia terrestris NRRL 8126]
gi|347003855|gb|AEO70254.1| hypothetical protein THITE_135180 [Thielavia terrestris NRRL 8126]
Length = 2006
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 191/343 (55%), Gaps = 42/343 (12%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
++AF + R ILVKN+ ++ ++++LFE G + RVL+PP G +V+F Q
Sbjct: 505 IEAFKS--QQRGDTCILVKNIRNASI-EEVRSLFEEHGSVLRVLMPPSGTIAIVQFSQPA 561
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AAF AY++FK+ L+LE P+G+F + N A
Sbjct: 562 ACRAAFAKKAYSRFKDSVLFLEKGPKGLFVD--------------------------NAA 595
Query: 555 -EEDNQQGV--PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
ED GV P V + + D+ + T+L+++NLNF++T + + + F+ S
Sbjct: 596 PAEDRPAGVQKPSVADLLARDDAEDQLETTSLFVRNLNFSTTSEGLAKAFQPLDGFVSAK 655
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
V K DPK PGQ LSMG+GF F ++E ALKV+ LD H++ ++ S+R ++
Sbjct: 656 VKTKTDPKRPGQVLSMGFGFCAFKSKEQAQAALKVMDGYVLDGHKLVVRASHRGHDA--- 712
Query: 672 TVKRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 728
+R+ ++AK+ +KI+++N+PF+A + +V LF +G+L +RLPKK + R
Sbjct: 713 AEERRREDLAKKAAAQRTKIVIKNLPFEASKKDVRNLFSEYGKLVALRLPKKF--NHTSR 770
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVE 771
GF F EF T EA A+ AL + THL GRRLVL++A EAD V+
Sbjct: 771 GFAFAEFATPREALNALTAL-KDTHLLGRRLVLDFA-EADEVD 811
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 302 GAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYG 361
G A D+N S + ED+ + E A R+F+RNLSYTVTEDD+ + F K+G
Sbjct: 303 GGASDSNEPSGAAHAHTLAEVGEDAAKLVEKTA---RLFLRNLSYTVTEDDIREHFGKFG 359
Query: 362 PLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
L EV LP+D + KGFA++ + P A A+Q DG+ F GR++H++P K
Sbjct: 360 VLEEVNLPLDAH-GRGKGFAMIRYEQPAAALAAFQ-TDGSTFQGRIIHILPAAAK 412
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 33/212 (15%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL-AEVILPIDKETDKTK-------GFA 381
AED E+ +FVRNL+++ T + L K F+ PL V + +TD + GF
Sbjct: 618 AEDQLETTSLFVRNLNFSTTSEGLAKAFQ---PLDGFVSAKVKTKTDPKRPGQVLSMGFG 674
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQV 441
F E A A + +DG V G L + + H ER+ + +
Sbjct: 675 FCAFKSKEQAQAALKVMDGYVLDGHKLVV----------RASHRGHDAAEERRREDLAKK 724
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT----GLVEFLQKNQA 496
A+ +I+ +KNLP+ D++ LF +G L + +P + T EF +A
Sbjct: 725 AAAQRTKIV-IKNLPFEASKKDVRNLFSEYGKLVALRLPKKFNHTSRGFAFAEFATPREA 783
Query: 497 KAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKE 528
A +L T L L+ FAEA E
Sbjct: 784 LNALTALKDTHLLGRRLVLD------FAEADE 809
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
I++ + + F +G VTDV+L RR F+GY D A A+ YFN +++ SR
Sbjct: 26 ISEAEFRKHFSAQGREVTDVKLI-----PHRRIGFVGYKSHDDAARAVKYFNKSFIRMSR 80
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDS--SAYQKLHNIAPK-QDLKPEHTKDSKPGKKSKND 144
I V+ + D+ P+ K P + + AP+ + ++ E+ K K + D
Sbjct: 81 IAVDLAKPIADSI-PRQTPKATPGNGIATTSSPGAGAPRVEHVEEENAKKRKRADLDEAD 139
Query: 145 PTFSDFLQLHGKDVSK 160
P ++L++ G K
Sbjct: 140 PKLQEYLEVMGHRTKK 155
>gi|156849149|ref|XP_001647455.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
gi|156118141|gb|EDO19597.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
Length = 863
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 192/369 (52%), Gaps = 39/369 (10%)
Query: 419 EGNVDGKVHCCISERKLD----AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL 474
E +V G V R +D A + E + +ILVKN P+ T +L LF PFG L
Sbjct: 478 EAHVIGDVRKYFEVRGVDLAKFAEMRSTEKKDDTVILVKNFPFGTTREELGELFLPFGKL 537
Query: 475 GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE 534
R+L+PP G +V++ AK AF LAY +FK+ +YLE P+ F
Sbjct: 538 ERLLMPPAGTIAIVQYRDVPSAKKAFMKLAYKRFKDTIIYLEKGPKNCFT---------- 587
Query: 535 KEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDT----------TLY 584
E ++ + ++ E+ ++ P V + +E E DT +++
Sbjct: 588 -----REAQDSDTLVNDDLPAEEIKEAKPSVSDIMETTESSNNADDTADDIHDGPTVSIF 642
Query: 585 IKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
IKNLNF +T + + F V K DPK G+ SMG+GF +F T+E +
Sbjct: 643 IKNLNFTTTTQQLTQRFNAFNGFVVAQVRTKPDPKHQGKTQSMGFGFAEFRTKEQALAVI 702
Query: 645 KVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ + +D H+++LK S+R S T S + KQ+G KI+V+N+PF+A + ++ +
Sbjct: 703 SAVDGTVIDGHKVQLKLSHRQGGSTGT-----SKSKGKQSG-KIIVKNLPFEATRKDIFD 756
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
LF +FG+LK VR+PKK S RGF F+EF+ EA+ AM L Q HL GRRLV+++A
Sbjct: 757 LFSSFGQLKSVRVPKKFDKSA--RGFAFIEFLLPKEAENAMDQL-QGVHLLGRRLVMQYA 813
Query: 765 -EEADNVED 772
EEA N E+
Sbjct: 814 QEEAVNAEE 822
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 55/86 (63%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I ++GR+F+RN+ Y TE D +LF +G L EV + ID T ++KGFA + F P+ A
Sbjct: 320 ITKTGRLFLRNILYNSTEQDFERLFSPFGELEEVHIAIDTRTGQSKGFAYILFKDPKDAV 379
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN 418
QAY LD +F GR+LH++ K++
Sbjct: 380 QAYIELDKQIFQGRLLHILAADAKKS 405
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQ 393
+SG+I V+NL + T D+ LF +G L V +P K+ DK+ +GFA + FL+P+ A
Sbjct: 736 QSGKIIVKNLPFEATRKDIFDLFSSFGQLKSVRVP--KKFDKSARGFAFIEFLLPKEAEN 793
Query: 394 AYQHLDGTVFLGRMLHL 410
A L G LGR L +
Sbjct: 794 AMDQLQGVHLLGRRLVM 810
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 139/352 (39%), Gaps = 53/352 (15%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKA 274
K+ I+VKN P G +++L F LP + + +A + ++D + KA
Sbjct: 505 TEKKDDTVILVKNFPFGTTREELGELF--LPFGKLERLLMPPAGTIAIVQYRDVPSAKKA 562
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
K ++ + K IY K ++ A D++ +++ A+ K + SV +
Sbjct: 563 FMK-LAYKRFKDTIIY-LEKGPKNCFTREAQDSDTLVNDDLPAEEIKEAKPSVSDIMETT 620
Query: 335 ESGR----------------IFVRNLSYTVTEDDLTKLFEKYGP--LAEV-ILPIDKETD 375
ES IF++NL++T T LT+ F + +A+V P K
Sbjct: 621 ESSNNADDTADDIHDGPTVSIFIKNLNFTTTTQQLTQRFNAFNGFVVAQVRTKPDPKHQG 680
Query: 376 KTK--GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISER 433
KT+ GF F E A +DGTV G + L K +G G
Sbjct: 681 KTQSMGFGFAEFRTKEQALAVISAVDGTVIDGHKVQL---KLSHRQGGSTGTSKS----- 732
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGL 487
+ + I+VKNLP+ D+ LF FG L V VP G
Sbjct: 733 ---------KGKQSGKIIVKNLPFEATRKDIFDLFSSFGQLKSVRVPKKFDKSARGF-AF 782
Query: 488 VEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNE 539
+EFL +A+ A + L L +++A E +E S+ +K + +
Sbjct: 783 IEFLLPKEAENAMDQLQGVHLLGRRLVMQYAQEEAVNAEEEISRMTQKARKQ 834
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TDV++ G+ RRFAFIG+ ED A + YFN ++V +++I+V + D T P+
Sbjct: 40 ITDVKILKDKNGQSRRFAFIGFRNEDDALDCIKYFNGSFVDTAKIEVSMAKSFADPTVPQ 99
Query: 104 SW 105
S
Sbjct: 100 SM 101
>gi|336262864|ref|XP_003346214.1| hypothetical protein SMAC_05751 [Sordaria macrospora k-hell]
gi|380093543|emb|CCC08506.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 836
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 182/339 (53%), Gaps = 37/339 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
++AF + R ILVKN+ T+ +L+ LFE G + RVL+PP G +V+F Q
Sbjct: 486 IEAFK--TQQRGDTTILVKNIKNTTI-EELRTLFEEHGTVLRVLMPPSGTIAIVQFAQPV 542
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
Q + AF AY++FK+ L+LE P+G+F + N A
Sbjct: 543 QCRTAFARKAYSRFKDSVLFLEKGPKGLFTD--------------------------NVA 576
Query: 555 E--EDNQQGV--PEVEENVEEDEEREPEPDTT-LYIKNLNFNSTEDSIRRHFKKCGPIAS 609
E GV P V + +E D+ E +T+ L+++NLNF++T + FK +
Sbjct: 577 APTEARPAGVQKPSVADLLERDDAEEQSLETSSLFVRNLNFSTTSQGLTDAFKHLDGFVN 636
Query: 610 VTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESE 669
V K DPK PGQ LSMG+GFV F T++ A KV+ L+ H++ +K S+R L++
Sbjct: 637 AKVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQAAQKVMDGHVLEAHKLSVKASHRGLDAA 696
Query: 670 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
+ + A G+K++++N+PF+ ++EV LF +G+L +R+PKK S RG
Sbjct: 697 EERRREDMAKKAASQGTKLVIKNLPFEVTKNEVRTLFSTYGKLVALRIPKKFNQSS--RG 754
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
F F EF T EA A +L + TH+ GRRLV+++A+ D
Sbjct: 755 FAFAEFSTAKEALNAFTSL-KDTHILGRRLVIDFAQAED 792
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Query: 316 KAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETD 375
KA +++D I ++ R+F+RNLSYTVTEDD+ + F K+G L EV +P+D +
Sbjct: 295 KATTGATKQDPESAISLIEKTSRLFLRNLSYTVTEDDVREHFAKFGTLEEVHVPLDSK-G 353
Query: 376 KTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
++KGFA++ + P A A+Q DGTVF GR+ H++P K
Sbjct: 354 RSKGFAMIRYEKPASAIAAFQ-TDGTVFQGRIAHILPAAAK 393
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 33/218 (15%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-------GFALVTFLM 387
E+ +FVRNL+++ T LT F+ V + +TD K GF V F
Sbjct: 606 ETSSLFVRNLNFSTTSQGLTDAFKHLDGF--VNAKVKTKTDPKKPGQVLSMGFGFVAFRT 663
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSK 447
+ A A + +DG V L + K + +D ER+ + + ++
Sbjct: 664 KDQAQAAQKVMDGHVLEAHKLSV-----KASHRGLD-----AAEERRREDMAKKAASQGT 713
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFN 501
+++ +KNLP+ +++ LF +G L + +P G EF +A AF
Sbjct: 714 KLV-IKNLPFEVTKNEVRTLFSTYGKLVALRIPKKFNQSSRGF-AFAEFSTAKEALNAFT 771
Query: 502 SLAYTKFKEVPLYLEWA------PEGVFAEAKEKSKGK 533
SL T L +++A PE A ++K++ +
Sbjct: 772 SLKDTHILGRRLVIDFAQAEDIDPEDQIAAMEKKTRAQ 809
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 21/151 (13%)
Query: 258 LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
+G ++ F+ + A + G L +K S S + AA++ M A
Sbjct: 654 MGFGFVAFRTKDQAQAA----QKVMDGHVLEAHKLSVKASHRGLDAAEERRREDM----A 705
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
K SQ ++ ++NL + VT++++ LF YG L + +P K +
Sbjct: 706 KKAASQ------------GTKLVIKNLPFEVTKNEVRTLFSTYGKLVALRIP-KKFNQSS 752
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRML 408
+GFA F + A A+ L T LGR L
Sbjct: 753 RGFAFAEFSTAKEALNAFTSLKDTHILGRRL 783
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 87/227 (38%), Gaps = 48/227 (21%)
Query: 29 ITQEQLKAKFEEKG-TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT+ + + F +G VTDV+L R F+GY + A A+ YFN +++ SR
Sbjct: 16 ITEAEFRKHFSAEGRQVTDVKLIPA-----RHIGFVGYKSAEDAARAVKYFNRSFIRMSR 70
Query: 88 IKVEKCSNLGDT--------------TKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTK 133
I V+ + D+ PK+ K P ++ + PK ++ P+ K
Sbjct: 71 IAVDIAKPIADSIPHHKSASRVPSKDVDPKNAPKVIPPNT--EVAAAAVPKVEVAPDAPK 128
Query: 134 DSKPGKKSKNDPTFSDFLQLHGKDVSK------------------LLPLSNKDGEEKEEE 175
K DP ++L + G SK +P +DGE +E
Sbjct: 129 -RKLDALDAADPKLQEYLDVMGAHPSKKMRNAEGLPITVDEVLAPAVPAGLEDGESDDEY 187
Query: 176 NEDESNNQIAHADISDMEYLKLKTKSKDTAPSDP-------SVPPVS 215
E + Q I+D E + + + + P S PPVS
Sbjct: 188 EEIPARTQNQPTHIADQEMVDAPPVAGVESSATPAAVEPSESAPPVS 234
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 125/329 (37%), Gaps = 85/329 (25%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH-----ATQ 393
I V+N+ T E+ L LFE++G + V++P + A+V F P A +
Sbjct: 499 ILVKNIKNTTIEE-LRTLFEEHGTVLRVLMP------PSGTIAIVQFAQPVQCRTAFARK 551
Query: 394 AYQHL-DGTVFL-----GRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSK 447
AY D +FL G + + V + ER DA Q +E S
Sbjct: 552 AYSRFKDSVLFLEKGPKGLFTDNVAAPTEARPAGVQKPSVADLLERD-DAEEQSLETSS- 609
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLVEFLQK 493
+ V+NL + T L F+ G+VL + G V F K
Sbjct: 610 --LFVRNLNFSTTSQGLTDAFKHLDGFVNAKVKTKTDPKKPGQVLSMGF---GFVAFRTK 664
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+QA+AA + + L ++ + G+ + EE ++E+
Sbjct: 665 DQAQAAQKVMDGHVLEAHKLSVKASHRGL--------------------DAAEERRREDM 704
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
A++ QG T L IKNL F T++ +R F G + ++ +
Sbjct: 705 AKKAASQG-------------------TKLVIKNLPFEVTKNEVRTLFSTYGKLVALRIP 745
Query: 614 RKKDPKSPGQFLSMGYGFVQFYT-RESLN 641
+K + S G+ F +F T +E+LN
Sbjct: 746 KKFNQS------SRGFAFAEFSTAKEALN 768
>gi|443895118|dbj|GAC72464.1| signal peptidase complex subunit [Pseudozyma antarctica T-34]
Length = 913
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 180/339 (53%), Gaps = 24/339 (7%)
Query: 435 LDAFNQVVEA-RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+DAF +A RS +LVKN+PY T +++ LFE G++ +VL+PP G LVE
Sbjct: 544 VDAFGTGAKAGRSDTTMLVKNIPYGTSVDEVQKLFEEHGEVDKVLIPPSGTIALVEMPVV 603
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
++AK AF +LAY +FK LYLE AP GV K+ G + K + + +
Sbjct: 604 SEAKVAFRALAYKRFKGGILYLEKAPVGVLT---SKTGGDKVVKQAPIKGKTIDTSANPS 660
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
A E E TLYIKNL+F++T+D + F A V
Sbjct: 661 ANLAAGGADDEAAEG------------ATLYIKNLSFSTTDDRLAGAFHGLSDYAFARVQ 708
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
K DPK PG LSMGYGFV F + + A K + +D H + + + RN ES T
Sbjct: 709 TKPDPKRPGARLSMGYGFVGFKSVAAARTAQKAMDGKVVDGHTLVVTFARRNAESSTTAS 768
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
S +KIL++N+PF+ + ++ +LF + G+LK VRLPKK RGFGFV
Sbjct: 769 LSSSGG-----STKILIKNLPFEVTKKDIRDLFASQGQLKSVRLPKKF--DNTTRGFGFV 821
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVED 772
E+ T EA+ A +AL + THL GR LVL+W+++ +N +D
Sbjct: 822 EYTTVREAQAAFEAL-KHTHLLGRHLVLQWSKQGENAQD 859
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 75/181 (41%), Gaps = 55/181 (30%)
Query: 308 NNASMENIKAKHWKSQEDSVQ----FAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL 363
N+ +E +A + E + + + I ESGR+FVRNL +T T+DD+ FE +G +
Sbjct: 287 NDEELERKQAAQRRKAEQAAERDQKIVDQIMESGRLFVRNLPFTATDDDIESFFESFGTV 346
Query: 364 ---------------------------------------------------AEVILPIDK 372
A+V +P+DK
Sbjct: 347 KQVSPPSSLPSQMCVAVVVIVAAVVALGHPYLHSMIGNRSLLTDACLGLFTAQVHIPLDK 406
Query: 373 ETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISE 432
+T +KG A V+F P HA AY+ DG+ F GR+LHL+P K+ + D K
Sbjct: 407 QTKASKGLAFVSFSDPAHALAAYRAKDGSTFQGRLLHLLPAVNKDAPADTDKKAATLKQT 466
Query: 433 R 433
R
Sbjct: 467 R 467
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T +L+ F +KG VTDV+L +G R+F F+GY E +AQ ALDYFN T++ +SRI
Sbjct: 13 LTDARLREHFSQKGAVTDVKLMRRPDGTSRKFGFVGYRSEQEAQEALDYFNRTFIDTSRI 72
Query: 89 KVEKCSNLGD 98
+E +GD
Sbjct: 73 TIEHAKKIGD 82
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 28/194 (14%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
++++NLS++ T+D L F A + + + + G+ V F A
Sbjct: 678 LYIKNLSFSTTDDRLAGAFHGLSDYAFARVQTKPDPKRPGARLSMGYGFVGFKSVAAART 737
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + +DG V G L + + S + IL+K
Sbjct: 738 AQKAMDGKVVDGHTLVVTFARRNAESSTTASLSSSGGSTK----------------ILIK 781
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAYTK 507
NLP+ D++ LF G L V +P G G VE+ +A+AAF +L +T
Sbjct: 782 NLPFEVTKKDIRDLFASQGQLKSVRLPKKFDNTTRGF-GFVEYTTVREAQAAFEALKHTH 840
Query: 508 FKEVPLYLEWAPEG 521
L L+W+ +G
Sbjct: 841 LLGRHLVLQWSKQG 854
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +I ++NL + VT+ D+ LF G L V LP K + T+GF V + A A+
Sbjct: 775 STKILIKNLPFEVTKKDIRDLFASQGQLKSVRLP-KKFDNTTRGFGFVEYTTVREAQAAF 833
Query: 396 QHLDGTVFLGRMLHLIPGKPKEN 418
+ L T LGR L L K EN
Sbjct: 834 EALKHTHLLGRHLVLQWSKQGEN 856
>gi|295673056|ref|XP_002797074.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226282446|gb|EEH38012.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 806
Score = 192 bits (487), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 183/334 (54%), Gaps = 25/334 (7%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F Q + + ILVKN + DL+ LFE FG++ R+L+PP G +VEF +
Sbjct: 450 LDSFRQREQGNTA--ILVKNFSFCVKAEDLRKLFESFGEIKRLLMPPSGTIAIVEFALAD 507
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+ + AF LAY K + L+LE AP+ +F E K + + + +
Sbjct: 508 ECQKAFKGLAYRKLGDSILFLERAPKDLFDE-KAIAVNAVLSAPKVVSQTFSTSDTFKAS 566
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
E D + + E +TL+++NLNF++T + F+ S V
Sbjct: 567 EADENETLLET---------------STLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKT 611
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K +PK PG+ LSMG+GFV+F T AL + LD+H++ +K S++ ++A +
Sbjct: 612 KPNPKRPGETLSMGFGFVEFRTSAQARAALATMNGYKLDQHELVIKTSHK--ATDAAEER 669
Query: 675 RKSSNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
R+ N K G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K + RGF F
Sbjct: 670 RREDNAKKLAMRGTKILIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTA--RGFAF 727
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
+F++ EA+ AM+AL + THL GRRLVLE+A E
Sbjct: 728 ADFVSAREAENAMEAL-KHTHLLGRRLVLEFASE 760
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 8/84 (9%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ E+GR+FVRNL Y +E DL LF + + D K+KGFA + ++ PE A
Sbjct: 282 LRETGRLFVRNLPYNASESDLEPLF--------IHVAFDTRQSKSKGFAYIQYVDPEAAI 333
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPK 416
QAY+ LDG F GR+LH++P PK
Sbjct: 334 QAYRVLDGKDFEGRLLHILPASPK 357
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 135/345 (39%), Gaps = 90/345 (26%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N S+ V +DL KLFE +G + +++P + A+V F + + +A++ L
Sbjct: 463 ILVKNFSFCVKAEDLRKLFESFGEIKRLLMP------PSGTIAIVEFALADECQKAFKGL 516
Query: 399 ------DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKL--------DAFNQVVEA 444
D +FL R PK+ V+ +S K+ D F + EA
Sbjct: 517 AYRKLGDSILFLERA-------PKDLFDEKAIAVNAVLSAPKVVSQTFSTSDTF-KASEA 568
Query: 445 RSKRIIL------VKNLPYRTLPTDLKALFEPFGDL--GRVLVPPY----GIT-----GL 487
+L V+NL + T L +F+P RV P G T G
Sbjct: 569 DENETLLETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRPGETLSMGFGF 628
Query: 488 VEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEE 547
VEF QA+AA ++ K + L ++ + + A EE
Sbjct: 629 VEFRTSAQARAALATMNGYKLDQHELVIKTSHKATDA--------------------AEE 668
Query: 548 EKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPI 607
++E+ A++ +G T + IKNL F +T+ IR F G +
Sbjct: 669 RRREDNAKKLAMRG-------------------TKILIKNLPFQATKKDIRNLFGAYGKL 709
Query: 608 ASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
SV V +K D + G+ F F + A++ L+++ L
Sbjct: 710 RSVRVPQKFDRT------ARGFAFADFVSAREAENAMEALKHTHL 748
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-------------PLASVRTTFLGMAYIGFKDEKNCN 272
T+ V+NL L F+PL P T +G ++ F+
Sbjct: 579 TLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRPGETLSMGFGFVEFRTSAQAR 638
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
AL + G +L+ ++ S K + AA++ + +ED+ A+
Sbjct: 639 AAL----ATMNGYKLDQHELVIKTSHKATDAAEE--------------RRREDN---AKK 677
Query: 333 IAESG-RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEH 390
+A G +I ++NL + T+ D+ LF YG L V +P ++ D+T +GFA F+
Sbjct: 678 LAMRGTKILIKNLPFQATKKDIRNLFGAYGKLRSVRVP--QKFDRTARGFAFADFVSARE 735
Query: 391 ATQAYQHLDGTVFLGRMLHL 410
A A + L T LGR L L
Sbjct: 736 AENAMEALKHTHLLGRRLVL 755
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 21/208 (10%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVI--LPIDKETDKT--KGFALVTF 385
E + E+ +FVRNL+++ T L ++F+ G L+ + P K +T GF V F
Sbjct: 572 ETLLETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRPGETLSMGFGFVEF 631
Query: 386 LMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
A A ++G L + K ER+ + + + R
Sbjct: 632 RTSAQARAALATMNGYKLDQHELVI----------KTSHKATDAAEERRREDNAKKLAMR 681
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP-YGIT----GLVEFLQKNQAKAAF 500
+ IL+KNLP++ D++ LF +G L V VP + T +F+ +A+ A
Sbjct: 682 GTK-ILIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTARGFAFADFVSAREAENAM 740
Query: 501 NSLAYTKFKEVPLYLEWAPEGVFAEAKE 528
+L +T L LE+A E KE
Sbjct: 741 EALKHTHLLGRRLVLEFASEDAIDPEKE 768
>gi|402217030|gb|EJT97112.1| hypothetical protein DACRYDRAFT_72431 [Dacryopinax sp. DJM-731 SS1]
Length = 766
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 183/345 (53%), Gaps = 38/345 (11%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS ILVKNLP T P ++ LF+P G L V+VPP G LVEF +++A A+ ++
Sbjct: 429 RSPTTILVKNLPAFTTPQAIRELFQPHGKLKSVVVPPSGAIALVEFDDESEAGVAWRNVN 488
Query: 505 YTKFKEVPLYLEWAPEGVF----AEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQ 560
Y +F +YLE P G++ A A K G E+ ED
Sbjct: 489 YRRFGGSIIYLERGPVGLWKPSGAAATAKGTGPER--------------------EDRVI 528
Query: 561 GVPEVEENVEEDEEREPE--PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
+PE +E+ PE P +TLYIKNL+F + ++ F V K +P
Sbjct: 529 VLPE--------DEQPPEAAPGSTLYIKNLSFTTASSTLSSLFSTLPGFVYARVQTKPNP 580
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNL-ESEATTVKRKS 677
K P L MGYGF F +RE +A K + ++ + H++ ++ + R E E
Sbjct: 581 KDPAGRLRMGYGFAGFGSREQAERARKAMDGATCEGHKLSVRFAGRGKEEDEQPAGPVGV 640
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
+ + +K++V+N+PF+A ++++ LF+ +G+LK VRLP K RGF F+EF++
Sbjct: 641 FALGNKKTAKVIVKNVPFEATKADIRSLFQGYGQLKSVRLPTKF--DRRTRGFAFLEFVS 698
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFG 782
+ EA+ M AL + THL GR LVL+WA++ ++++R+RT R FG
Sbjct: 699 RKEAENVMAAL-KHTHLLGRHLVLDWADDEQGMDNLRERTKRAFG 742
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 282 WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFV 341
WKG ++ S D GAAD N+ ++ ++ + K E Q AE I +GR+F+
Sbjct: 208 WKG-----FEQSDDED----GAADQPNSGAI-GVQEQSSKEAERH-QTAETILSTGRLFL 256
Query: 342 RNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGT 401
RNL+YT T +L + F ++G + +V LP+ + G A +TF P A AY+ LD +
Sbjct: 257 RNLAYTCTSAELQEHFSRFGEIQQVHLPL-TPSRTPSGLAFITFADPSCALAAYEALDTS 315
Query: 402 VFLGRMLHLI 411
F GR+LH++
Sbjct: 316 PFQGRLLHIL 325
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 198/523 (37%), Gaps = 86/523 (16%)
Query: 25 FIYKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
Y T +L+ F G + V L T AFI + A AA + + T F
Sbjct: 259 LAYTCTSAELQEHFSRFGEIQQVHLPLTPSRTPSGLAFITFADPSCALAAYEALD-TSPF 317
Query: 85 SSRI-----KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGK 139
R+ V+K T+ PKS KD K +
Sbjct: 318 QGRLLHILGAVDKRPAASVTSAPKS---------------------------LKDKKLDE 350
Query: 140 KSKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEE-ENEDESNN--QIAHADISDMEYLK 196
+ K+ D+ L+ + ++ K G EK E N +E N ++A A+ S ++ K
Sbjct: 351 RKKSSGHGWDWAMLYLNPDAVAAAVAGKLGVEKSEILNAEEGNAAVKLALAETSVVQETK 410
Query: 197 LKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRT 255
L +S S S P +R TI+VKNLPA + ++ F+P L SV
Sbjct: 411 LFLESNGVDISAFSGRP-------QRSPTTILVKNLPAFTTPQAIRELFQPHGKLKSVVV 463
Query: 256 TFLG-MAYIGFKDEKNCNKALNKNKSFWK-GKQLNIYKYSKDNSAKYSGAADDNNNASME 313
G +A + F DE A +N ++ + G + + K SGAA E
Sbjct: 464 PPSGAIALVEFDDESEAGVAW-RNVNYRRFGGSIIYLERGPVGLWKPSGAAATAKGTGPE 522
Query: 314 NIKAKHWKSQEDSV-QFAED-----IAESGRIFVRNLSYTVTEDDLTKLFEK-----YGP 362
+ED V ED A ++++NLS+T L+ LF Y
Sbjct: 523 ---------REDRVIVLPEDEQPPEAAPGSTLYIKNLSFTTASSTLSSLFSTLPGFVYAR 573
Query: 363 LAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-IPGKPKENEGN 421
+ P D G+ F E A +A + +DG G L + G+ KE +
Sbjct: 574 VQTKPNPKDPAGRLRMGYGFAGFGSREQAERARKAMDGATCEGHKLSVRFAGRGKEEDEQ 633
Query: 422 VDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP- 480
G V K A ++VKN+P+ D+++LF+ +G L V +P
Sbjct: 634 PAGPVGVFALGNKKTA-----------KVIVKNVPFEATKADIRSLFQGYGQLKSVRLPT 682
Query: 481 -----PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
G +EF+ + +A+ +L +T L L+WA
Sbjct: 683 KFDRRTRGF-AFLEFVSRKEAENVMAALKHTHLLGRHLVLDWA 724
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 43 TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVE 91
T+TD ++ +G R+F F+GY ++A A +++N TY+ S+RI VE
Sbjct: 38 TLTDARIARKPDGTSRKFGFVGYKTREEADRAREWWNRTYIDSTRITVE 86
>gi|145345423|ref|XP_001417211.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577438|gb|ABO95504.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 874
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 183/325 (56%), Gaps = 25/325 (7%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS ++L+KNLPY +L+ L E FG + R ++P +VEFL+ ++A+ AF LA
Sbjct: 534 RSNCVLLLKNLPYEAEEDELRELCEKFGGVARFILPDTHTIAVVEFLEASEARRAFTGLA 593
Query: 505 YTKFKEVPLYLEWAPEGVFAE-AKEKSKGKEKEKNEEEGEEGEEEKKENT-AEEDNQQGV 562
Y +++ VPLYLEWAPE +FA +K KG + + + +E ++ T A+ D +
Sbjct: 594 YKRYRHVPLYLEWAPENIFASTSKVDIKGAKALAVADASSDLAKEARDKTKAKVDAANDL 653
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHF-----KKCGPIASVTVARKKD 617
+ V +D ++++K L+F +T+ +R HF + G I + V +
Sbjct: 654 --AGKTVSDDA-------VSIFVKGLDFGTTDKKLRSHFAAAAQRVSGQIIAARVVTHRG 704
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS 677
P G+ LS G+GFV+F T L LQ SSLD ++L+ S+ + K+
Sbjct: 705 P--GGKMLSRGFGFVEFDTPMVAKSVLTALQGSSLDGKTLKLELSS---QGGGERDDDKA 759
Query: 678 SNVAKQ-TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
V K + +KI+VRN+ F+A + ++++LF FG+LK VRLPKK G HRGF FVEF
Sbjct: 760 GKVPKGFSATKIVVRNVAFEATKRDIQKLFNPFGQLKQVRLPKKF--DGAHRGFAFVEFN 817
Query: 737 TKNEAKRAMKALCQSTHLYGRRLVL 761
T+ E + AM AL + THLYGR +++
Sbjct: 818 TRRETQAAMDAL-RGTHLYGRHIII 841
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 64/84 (76%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E ++E+GRIFVRNL YT TE+++ +LFE++G L V + +D+ T ++KG A VTF++PE
Sbjct: 328 EALSETGRIFVRNLPYTATEEEVAELFEQFGKLTAVHILVDRSTKRSKGLAYVTFVIPED 387
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGK 414
+A + +DG++F GR++HL+P K
Sbjct: 388 GVKAMEAVDGSIFQGRLIHLLPAK 411
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ ++L+ F G VTDV++ T +G R+ AF+GY E A AL YF+ T++ +SR+
Sbjct: 12 LKDDRLREHFAAMGEVTDVKIVRTADGTSRQMAFVGYKTEAMATKALKYFDKTFIDTSRV 71
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKD 134
+V+ ++ P+ WSKY+ SSA ++ I K E D
Sbjct: 72 EVQYARSVHSAQIPRPWSKYSAGSSANKEKETIKSGHGGKGEAEAD 117
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 26/181 (14%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGP-LAEVILPIDKETDK-------TKGFALVTFLMPEH 390
IFV+ L + T+ L F ++ I+ T + ++GF V F P
Sbjct: 665 IFVKGLDFGTTDKKLRSHFAAAAQRVSGQIIAARVVTHRGPGGKMLSRGFGFVEFDTPMV 724
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
A L G+ G+ L L ++G ER D +V + S I
Sbjct: 725 AKSVLTALQGSSLDGKTLKL----ELSSQGG---------GERDDDKAGKVPKGFSATKI 771
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVP-----PYGITGLVEFLQKNQAKAAFNSLAY 505
+V+N+ + D++ LF PFG L +V +P + VEF + + +AA ++L
Sbjct: 772 VVRNVAFEATKRDIQKLFNPFGQLKQVRLPKKFDGAHRGFAFVEFNTRRETQAAMDALRG 831
Query: 506 T 506
T
Sbjct: 832 T 832
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 667 ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 726
E E+ V +TG +I VRN+P+ A + EV ELF+ FG+L V + +V
Sbjct: 316 EPESKDVNAADMEALSETG-RIFVRNLPYTATEEEVAELFEQFGKLTAVHI---LVDRST 371
Query: 727 HR--GFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
R G +V F+ + +AM+A+ S ++ RL+
Sbjct: 372 KRSKGLAYVTFVIPEDGVKAMEAVDGS--IFQGRLI 405
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 131/327 (40%), Gaps = 63/327 (19%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----GL--VEFLQKNQAKAAFNSL 503
I V+NLPY ++ LFE FG L V + T GL V F+ A ++
Sbjct: 336 IFVRNLPYTATEEEVAELFEQFGKLTAVHILVDRSTKRSKGLAYVTFVIPEDGVKAMEAV 395
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
+ F+ ++L A ++ G+ E GE++KK++
Sbjct: 396 DGSIFQGRLIHLLPAKRAPQLDSTMGGVGRTGE--------GEDDKKDSF---------- 437
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNF--NSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
E D ER+ + T +L ++ +I H+ VT A D +
Sbjct: 438 ----KTERDAERKADAGNTKAWNSLFMRQDTVAAAIAAHY-------GVTKAELLDSGAD 486
Query: 622 GQFLSMGYG--FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN 679
+ M G V T++ L +A +D +LE A + KS++
Sbjct: 487 DLAVRMALGEAHVIATTKQQLGEA-------GIDAE---------SLEQSAASSGAKSAS 530
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
K++ +L++N+P++A++ E+ EL + FG + LP VEF+ +
Sbjct: 531 RVKRSNCVLLLKNLPYEAEEDELRELCEKFGGVARFILPDTHT-------IAVVEFLEAS 583
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWAEE 766
EA+RA L + + L LEWA E
Sbjct: 584 EARRAFTGLAYKRYRH-VPLYLEWAPE 609
>gi|343427578|emb|CBQ71105.1| probable RNA-binding protein [Sporisorium reilianum SRZ2]
Length = 866
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 192/363 (52%), Gaps = 37/363 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
+DAF+ +RS ILVKN+PY T +++ LF G++ +VL+PP G +VE
Sbjct: 494 VDAFDGKKSSRSDTTILVKNIPYGTSVDEVQKLFAEHGEVDKVLIPPSGTIAVVEMPVVG 553
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE------KEKNEEEGEEGEEE 548
+A+ AF ++AY +FK LYLE P G+ K K + K +
Sbjct: 554 EARLAFRAIAYKRFKGGILYLEKVPLGLLTPQKAGEKVVKQAPIVGKSIDTTSNPSSNIT 613
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
N AE+D G TLYIKNL+F++T++ + F A
Sbjct: 614 ASANGAEDDAVDGA-------------------TLYIKNLSFSTTDERLASAFHGLSDFA 654
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES 668
+ K DP+ PG LSMGYGFV F + ++ A K + +D H + + + RN ES
Sbjct: 655 FARIQTKPDPRRPGARLSMGYGFVGFKSVDAARTAQKAMDGKVVDGHTLVVTFARRNAES 714
Query: 669 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 728
+ S++++ +KIL++N+PF+A + ++ +LF + G+LK VRLPKK S R
Sbjct: 715 STSA----STSLSSGGSTKILIKNLPFEATKKDIRDLFASQGQLKSVRLPKKFDNS--TR 768
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEA-DNVEDIRKRTNR----YFGT 783
GFGFVE+ T EA+ A +AL + THL GR LVL+W+ A D+ E+++ + ++ + G
Sbjct: 769 GFGFVEYTTVREAQAAFEAL-KHTHLLGRHLVLQWSHAAKDSREEVQMQRDKTKSGFVGA 827
Query: 784 AVG 786
A G
Sbjct: 828 AAG 830
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 72/122 (59%)
Query: 315 IKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET 374
++ K K+ E + + I ESGR+F+RNL + ED++ FE +G + +V +P+DK+T
Sbjct: 298 LQRKAEKAAEQDQKLVDQIMESGRLFIRNLPFAANEDEIQAFFESFGTVKQVHIPLDKQT 357
Query: 375 DKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERK 434
+KG A V+F P HA A++ DG+ F GR+LHL+P K+ + D K + + +
Sbjct: 358 KASKGLAFVSFSDPAHALAAFRAKDGSTFQGRLLHLLPAVNKDAPADADSKKAATLKQAR 417
Query: 435 LD 436
D
Sbjct: 418 AD 419
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T +L+ F +KG VTDV+L +G R+F F+GY +D+AQ ALDYF+ T++ +SRI
Sbjct: 13 LTDARLREHFSQKGAVTDVKLMRRPDGTSRKFGFVGYRSDDEAQQALDYFDRTFIDTSRI 72
Query: 89 KVEKCSNLGD 98
+E +GD
Sbjct: 73 SIELAKKIGD 82
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 120/325 (36%), Gaps = 53/325 (16%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKP--------LP----LASVRTTFLGMAYIGFKDEK 269
R TI+VKN+P G +++ F +P +A V +G A + F+
Sbjct: 504 RSDTTILVKNIPYGTSVDEVQKLFAEHGEVDKVLIPPSGTIAVVEMPVVGEARLAFR--A 561
Query: 270 NCNKALNKNKSFWKGKQLNIYKYSKDN-----SAKYSGAADDNNNASMENIKAKHWKSQE 324
K + + L + K A G + D + NI A +++
Sbjct: 562 IAYKRFKGGILYLEKVPLGLLTPQKAGEKVVKQAPIVGKSIDTTSNPSSNITASANGAED 621
Query: 325 DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKG 379
D+V + ++++NLS++ T++ L F A + + + + G
Sbjct: 622 DAV-------DGATLYIKNLSFSTTDERLASAFHGLSDFAFARIQTKPDPRRPGARLSMG 674
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFN 439
+ V F + A A + +DG V G L + + K
Sbjct: 675 YGFVGFKSVDAARTAQKAMDGKVVDGHTLVVTFARRNAESSTSASTSLSSGGSTK----- 729
Query: 440 QVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQK 493
IL+KNLP+ D++ LF G L V +P G G VE+
Sbjct: 730 ----------ILIKNLPFEATKKDIRDLFASQGQLKSVRLPKKFDNSTRGF-GFVEYTTV 778
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWA 518
+A+AAF +L +T L L+W+
Sbjct: 779 REAQAAFEALKHTHLLGRHLVLQWS 803
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 655 HQIELKRSNRNLESEATTVKRKSSNVAKQT--GSKILVRNIPFQAKQSEVEELFKAFGEL 712
H E +R L+ +A + + Q ++ +RN+PF A + E++ F++FG +
Sbjct: 287 HDQEFERKQAELQRKAEKAAEQDQKLVDQIMESGRLFIRNLPFAANEDEIQAFFESFGTV 346
Query: 713 KFVRLP--KKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
K V +P K+ S +G FV F A A +A ST GR L L
Sbjct: 347 KQVHIPLDKQTKAS---KGLAFVSFSDPAHALAAFRAKDGST-FQGRLLHL 393
>gi|444317805|ref|XP_004179560.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
gi|387512601|emb|CCH60041.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
Length = 868
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 195/352 (55%), Gaps = 13/352 (3%)
Query: 419 EGNVDGKVHCCISERKLDA--FNQVVEARSK--RIILVKNLPYRTLPTDLKALFEPFGDL 474
E +V G V + +D F+Q+ A K +ILVKN P+ T +L LF PFG L
Sbjct: 476 EAHVIGDVRKYFESKGVDLTKFSQMRSANDKDDTVILVKNFPFGTTREELGDLFLPFGKL 535
Query: 475 GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE 534
R L+P G ++++ +AAF LAY +FK+ +YLE P+ +F +E S +
Sbjct: 536 TRFLMPNVGTIAIIQYRDITSGRAAFTKLAYKRFKDGIIYLEKGPKNLFT--REPSSDES 593
Query: 535 KEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTE 594
E E+ E +E K + + ++ E + + DE+ P +++IKNLNF +T
Sbjct: 594 LESEEKSEVEAKEVKLSSHDIMEKREESSEKRTDDDGDEDIVDGPTVSIFIKNLNFTTTT 653
Query: 595 DSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDE 654
+ FK G V K DPK + LSMG+GFV+F T+E ++ + S +D
Sbjct: 654 SQLVERFKSFGGFVVAQVKTKPDPKDSQRTLSMGFGFVEFRTKEQALAVIEAMDGSVIDG 713
Query: 655 HQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKF 714
H+I++K S+R + T ++ K+ SKI+V+N+PF+A + ++ ELF +FG+LK
Sbjct: 714 HKIQMKLSHR----QGTNNNSNNAKDKKKKSSKIIVKNLPFEATRKDIFELFSSFGQLKS 769
Query: 715 VRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
VR+PKK S RGF FVEF+ EA+ AM L Q HL GRRLV+++AE+
Sbjct: 770 VRVPKKFDKSA--RGFAFVEFLLPKEAENAMDQL-QGVHLLGRRLVMQYAEQ 818
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I+ +GR+F+RN+ YT TE+D KLF +G + EV + +D T K+KGFA V F P
Sbjct: 316 EKISATGRLFLRNILYTSTENDFKKLFSSFGEIDEVHVALDTRTGKSKGFAYVLFKNPAD 375
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
A QAY LD +F GR+LH++P K+N
Sbjct: 376 AVQAYIELDKQIFQGRLLHILPADSKKN 403
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 80/193 (41%), Gaps = 27/193 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGP--LAEVIL---PIDKETDKTKGFALVTFLMPEHATQ 393
IF++NL++T T L + F+ +G +A+V P D + + GF V F E A
Sbjct: 642 IFIKNLNFTTTTSQLVERFKSFGGFVVAQVKTKPDPKDSQRTLSMGFGFVEFRTKEQALA 701
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ +DG+V G H I K +G + + + I+VK
Sbjct: 702 VIEAMDGSVIDG---HKIQMKLSHRQGTNNNSNNAKDK------------KKKSSKIIVK 746
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAYTK 507
NLP+ D+ LF FG L V VP G VEFL +A+ A + L
Sbjct: 747 NLPFEATRKDIFELFSSFGQLKSVRVPKKFDKSARGF-AFVEFLLPKEAENAMDQLQGVH 805
Query: 508 FKEVPLYLEWAPE 520
L +++A +
Sbjct: 806 LLGRRLVMQYAEQ 818
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 44 VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPK 103
+TDV++ G RRFAFIG+ ED A A+DYFN +Y+ ++++ V + D P+
Sbjct: 39 ITDVKILKDKNGNSRRFAFIGFRNEDDAYDAVDYFNGSYIDTAKLNVSIAKSFADPNVPQ 98
>gi|398398892|ref|XP_003852903.1| hypothetical protein MYCGRDRAFT_85600 [Zymoseptoria tritici IPO323]
gi|339472785|gb|EGP87879.1| hypothetical protein MYCGRDRAFT_85600 [Zymoseptoria tritici IPO323]
Length = 770
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 184/332 (55%), Gaps = 25/332 (7%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F + R ILVKN+P +LK LFE GD+ + L+PP G +VEFL
Sbjct: 419 LDSFKR--SQRGDTAILVKNIPSDCSRDELKRLFEEQGDVKKFLMPPAGTIAIVEFLNAA 476
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
Q KAAF +LAY K K L+LE AP+ VFA GK + ++G K +
Sbjct: 477 QCKAAFAALAYRKVKSSVLFLEKAPKDVFA-------GKPIGDGVSQAQDGVS-KVSTSD 528
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+D Q V E TL+++NLNF++ + FK S V
Sbjct: 529 LKDPDQTVAETGGTA------------TLFVRNLNFSTNNAVLTETFKPLDGFLSARVKT 576
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
+ DPK PG+ LSMG+GF++F + AL V+ SL+ H+++++ S++ ++ K
Sbjct: 577 RTDPKRPGEILSMGFGFLEFASARQAQAALSVMDGYSLEGHKLQIRASHKGADAAEERKK 636
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
++ A G+K+L++N+PF+A + +V LF A+G+L+ VR+PKKM + RGF F +
Sbjct: 637 ADAAKKAAGRGTKLLIKNLPFEATKKDVRALFGAYGQLRSVRVPKKMNSAA--RGFAFAD 694
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
F T EA+ AM+AL + THL GRRLV+++A E
Sbjct: 695 FTTVKEAQSAMEAL-RDTHLLGRRLVIDFASE 725
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 52/86 (60%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E + S R+FVRNL + V ++DL F YG L EV +P+D +T KGF + F P+
Sbjct: 241 EAVRSSMRLFVRNLPFNVQKEDLQAEFASYGNLEEVHVPLDPKTGAGKGFGYIQFSNPDS 300
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK 416
A QA+ DG F GR+LH++PG K
Sbjct: 301 AEQAFVDRDGQTFQGRLLHVLPGSAK 326
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 123/310 (39%), Gaps = 77/310 (24%)
Query: 58 RRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQK 117
RR ++GY + AQ A+ YFN T+V SRI VE + ++ + + A Q+
Sbjct: 40 RRIGYVGYKTPEDAQKAVKYFNRTFVRMSRIGVELARPIEESKSVRGGAPTARRDVVAQE 99
Query: 118 LHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKE---- 173
N + +LK ++S +K K DP +FL DV K P S K+ E E
Sbjct: 100 AAN--NENNLK--RKRESNVPEKEK-DPKLQEFL-----DVYK--PKSKKNAWESEKLPV 147
Query: 174 ---EENEDESNNQIAHADI-SDMEYLKLKTKSK------------DTAP----------- 206
E E+ + AD SD EY + K+K D AP
Sbjct: 148 PAVETEMSEAKDVTVVADAPSDNEYETVPKKAKKSKQEHAVTETSDGAPQEEVARVPVRT 207
Query: 207 -------SDPSV----PPVSKAPVHK----------RQYHTIVVKNLPAGVKKKDLKAYF 245
++P + PP+ + R + V+NLP V+K+DL+A F
Sbjct: 208 SKPDDQVTNPEISIPTPPMDDNEAQEASGDVEIEAVRSSMRLFVRNLPFNVQKEDLQAEF 267
Query: 246 KP--------LPLASVRTTFLGMAYIGFKDEKNCNKA-LNKNKSFWKGKQLNIYKYSKDN 296
+PL G YI F + + +A ++++ ++G+ L++
Sbjct: 268 ASYGNLEEVHVPLDPKTGAGKGFGYIQFSNPDSAEQAFVDRDGQTFQGRLLHVLP----G 323
Query: 297 SAKYSGAADD 306
SAK DD
Sbjct: 324 SAKRENKLDD 333
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 32/205 (15%)
Query: 333 IAESG---RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP-IDKETDKTK-------GFA 381
+AE+G +FVRNL+++ LT+ F+ PL + + TD + GF
Sbjct: 536 VAETGGTATLFVRNLNFSTNNAVLTETFK---PLDGFLSARVKTRTDPKRPGEILSMGFG 592
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQV 441
+ F A A +DG G L + K ERK +
Sbjct: 593 FLEFASARQAQAALSVMDGYSLEGHKLQI----------RASHKGADAAEERKKADAAKK 642
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQ 495
R + +L+KNLP+ D++ALF +G L V VP G +F +
Sbjct: 643 AAGRGTK-LLIKNLPFEATKKDVRALFGAYGQLRSVRVPKKMNSAARGF-AFADFTTVKE 700
Query: 496 AKAAFNSLAYTKFKEVPLYLEWAPE 520
A++A +L T L +++A E
Sbjct: 701 AQSAMEALRDTHLLGRRLVIDFASE 725
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 140/369 (37%), Gaps = 78/369 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ----- 393
I V+N+ + D+L +LFE+ G + + ++P A+V FL
Sbjct: 432 ILVKNIPSDCSRDELKRLFEEQGDVKKFLMP------PAGTIAIVEFLNAAQCKAAFAAL 485
Query: 394 AYQHLDGTV-FLGRM-LHLIPGKPKEN--EGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
AY+ + +V FL + + GKP + DG S+ K D V E
Sbjct: 486 AYRKVKSSVLFLEKAPKDVFAGKPIGDGVSQAQDGVSKVSTSDLK-DPDQTVAETGGTAT 544
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDL--------------GRVLVPPYGITGLVEFLQKNQ 495
+ V+NL + T L F+P G +L + G +EF Q
Sbjct: 545 LFVRNLNFSTNNAVLTETFKPLDGFLSARVKTRTDPKRPGEILSMGF---GFLEFASARQ 601
Query: 496 AKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAE 555
A+AA + + ++ EG + + KG + EE KK + A+
Sbjct: 602 AQAALSVMDG-----------YSLEGHKLQIRASHKG---------ADAAEERKKADAAK 641
Query: 556 EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARK 615
+ +G T L IKNL F +T+ +R F G + SV V +K
Sbjct: 642 KAAGRG-------------------TKLLIKNLPFEATKKDVRALFGAYGQLRSVRVPKK 682
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR 675
+ + G+ F F T + A++ L+++ L ++ + ++ + E +++
Sbjct: 683 MNSA------ARGFAFADFTTVKEAQSAMEALRDTHLLGRRLVIDFASEDPEDAEAEIEK 736
Query: 676 KSSNVAKQT 684
V Q
Sbjct: 737 MQQKVGAQV 745
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 73/198 (36%), Gaps = 34/198 (17%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRTTF----------LGMAYIGFKDEKNCN 272
T+ V+NL L FKPL A V+T +G ++ F +
Sbjct: 544 TLFVRNLNFSTNNAVLTETFKPLDGFLSARVKTRTDPKRPGEILSMGFGFLEFASARQAQ 603
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
AL S G L +K S K + AA++ A A
Sbjct: 604 AAL----SVMDGYSLEGHKLQIRASHKGADAAEERKKADAAKKAA--------------- 644
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
++ ++NL + T+ D+ LF YG L V +P K +GFA F + A
Sbjct: 645 -GRGTKLLIKNLPFEATKKDVRALFGAYGQLRSVRVP-KKMNSAARGFAFADFTTVKEAQ 702
Query: 393 QAYQHLDGTVFLGRMLHL 410
A + L T LGR L +
Sbjct: 703 SAMEALRDTHLLGRRLVI 720
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 681 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP-KKMVGSGLHRGFGFVEFITKN 739
A ++ ++ VRN+PF ++ +++ F ++G L+ V +P G+G +GFG+++F +
Sbjct: 242 AVRSSMRLFVRNLPFNVQKEDLQAEFASYGNLEEVHVPLDPKTGAG--KGFGYIQFSNPD 299
Query: 740 EAKRAM 745
A++A
Sbjct: 300 SAEQAF 305
>gi|358058378|dbj|GAA95897.1| hypothetical protein E5Q_02555 [Mixia osmundae IAM 14324]
Length = 680
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 148/512 (28%), Positives = 238/512 (46%), Gaps = 104/512 (20%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
ED + R+F+RNL++TV DL F ++G ++ V L +D++ + +G A VTF +
Sbjct: 180 EDTLTTNRLFLRNLAFTVRSSDLQTTFAQHGRVSHVHL-VDEDKTERRGLAYVTFETAKE 238
Query: 391 ATQAYQHLDGTVFLGRMLHLI-------------PGKPKENEGNVDGK------------ 425
A QA LDGT+ GR+LH++ PGK +++G +D +
Sbjct: 239 AEQARSALDGTILHGRLLHVMLAAARPGEADQARPGKNSKSKGLLDRRDLAWSSLQMTPD 298
Query: 426 -VHCCISER----KLD---------------AFNQVVE--------------------AR 445
V +++R K D A +Q+++ +
Sbjct: 299 AVMATMADRLGVSKDDLVGRGSENAAVRLALAESQLIDESRTYFAKAGVDLLALNKPGPK 358
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAY 505
SK ++LVKN+P T P+ LK +F+ G + VL+PP +VEF + A A+ +LAY
Sbjct: 359 SKTMLLVKNIPAGTQPSALKLMFDASGQVKNVLMPPSATLAIVEFTDVDGANKAYKTLAY 418
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEV 565
+ LYLE AP + N D+ P V
Sbjct: 419 KRIGNAVLYLERAPLALV----------------------------NQPIRDDDDVAPSV 450
Query: 566 EENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV-ARKKDPKSPGQ- 623
E +P+ + TLY+KNL+F T + ++ F V RK D +
Sbjct: 451 SAIPEGQPSEQPD-ENTLYVKNLSFQVTSERLQAMFSDLAGYRFARVQMRKTDVSGVAKT 509
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
S+GYGFV F T + A+ Q L+ + L R+ R +++ + + S +
Sbjct: 510 AASLGYGFVGFDTEGNAQAAMTRRQGQLLEGRPLLLARARRGQDAKGAGGEAQESKAGRP 569
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH-RGFGFVEFITKNEAK 742
T S ++++N+PF+ + E++ LFK++G +K +R+P+K + H RGF FVEF + EAK
Sbjct: 570 T-STLVIKNVPFEVSKKELQALFKSYGNIKSLRMPRK---ADRHTRGFAFVEFRSTAEAK 625
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEADNVEDIR 774
A +AL Q THL GR LV+E+ +AD +R
Sbjct: 626 EAKQALSQ-THLLGRHLVIEYG-QADQGASLR 655
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 149/694 (21%), Positives = 262/694 (37%), Gaps = 144/694 (20%)
Query: 30 TQEQLKAKFEE--KGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
T E+LK F + +TD ++ +G+ RR AF+G+ +QA A D++NNTY+ S+
Sbjct: 16 TAEELKKHFSAHLQVDITDSRIASKKDGRSRRIAFLGFATAEQAALARDHYNNTYLSGSK 75
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTF 147
I V D KP+ + A + PK + + E + + G +S P
Sbjct: 76 IIV-------DFAKPRVPTV---KQEALVVQEALLPKPEQQAEELQAA--GDRSSRSPPS 123
Query: 148 SDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPS 207
+D + D++ L +E + ED + S + AP
Sbjct: 124 AD--EAGDDDLAYLTRRLAGRQQEVSQPAEDAVRSASPVPSTSKIA----------EAPV 171
Query: 208 DPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS-------VRTTFLGM 260
PSV P + + + + ++NL V+ DL+ F S +T G+
Sbjct: 172 APSVAPEDEDTL---TTNRLFLRNLAFTVRSSDLQTTFAQHGRVSHVHLVDEDKTERRGL 228
Query: 261 AYIGFKDEKNCNKALNK-NKSFWKGKQLNIY----------KYSKDNSAKYSGAADDNN- 308
AY+ F+ K +A + + + G+ L++ + ++K G D +
Sbjct: 229 AYVTFETAKEAEQARSALDGTILHGRLLHVMLAAARPGEADQARPGKNSKSKGLLDRRDL 288
Query: 309 ---------NASMENIKAKHWKSQEDSVQFAED-------IAESGRIFVRNLSYTVTEDD 352
+A M + + S++D V + +AES I + D
Sbjct: 289 AWSSLQMTPDAVMATMADRLGVSKDDLVGRGSENAAVRLALAESQLIDESRTYFAKAGVD 348
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFAL-VTF---------LMPEHATQA---YQHLD 399
L L K GP ++ +L + T+ AL + F LMP AT A + +D
Sbjct: 349 LLAL-NKPGPKSKTMLLVKNIPAGTQPSALKLMFDASGQVKNVLMPPSATLAIVEFTDVD 407
Query: 400 G----------------TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVE 443
G ++L R + +P ++ +V V I E Q E
Sbjct: 408 GANKAYKTLAYKRIGNAVLYLERAPLALVNQPIRDDDDVAPSV-SAIPE------GQPSE 460
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGD--LGRVLVPPYGITGLVEFLQKNQAKAAFN 501
+ + VKNL ++ L+A+F RV + ++G+ AK A
Sbjct: 461 QPDENTLYVKNLSFQVTSERLQAMFSDLAGYRFARVQMRKTDVSGV--------AKTA-A 511
Query: 502 SLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNE---EEGEEGEEEKKENTAEEDN 558
SL Y ++ + EG A + +G+ E G++ K +++
Sbjct: 512 SLGYG-------FVGFDTEGNAQAAMTRRQGQLLEGRPLLLARARRGQDAKGAGGEAQES 564
Query: 559 QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
+ G P +TL IKN+ F ++ ++ FK G I S+ + RK D
Sbjct: 565 KAG----------------RPTSTLVIKNVPFEVSKKELQALFKSYGNIKSLRMPRKADR 608
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+ G+ FV+F + +A + L + L
Sbjct: 609 H------TRGFAFVEFRSTAEAKEAKQALSQTHL 636
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 118/308 (38%), Gaps = 42/308 (13%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKALNKNKSFW 282
++VKN+PAG + LK F V+ + +A + F D NKA K ++
Sbjct: 363 LLVKNIPAGTQPSALKLMFDAS--GQVKNVLMPPSATLAIVEFTDVDGANKAY-KTLAYK 419
Query: 283 KGKQLNIYKYSKDNSAKYSGAADDNNNA-SMENIKAKHWKSQEDSVQFAEDIAESGRIFV 341
+ +Y + DD++ A S+ I Q D ++V
Sbjct: 420 RIGNAVLYLERAPLALVNQPIRDDDDVAPSVSAIPEGQPSEQPDE----------NTLYV 469
Query: 342 RNLSYTVTEDDLTKLFEKYGPLAEVILPIDK-------ETDKTKGFALVTFLMPEHATQA 394
+NLS+ VT + L +F + + K +T + G+ V F +A A
Sbjct: 470 KNLSFQVTSERLQAMFSDLAGYRFARVQMRKTDVSGVAKTAASLGYGFVGFDTEGNAQAA 529
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKN 454
G + GR L L + ++ G+ + R +++KN
Sbjct: 530 MTRRQGQLLEGRPLLLARARRGQDAKGAGGEAQESKA------------GRPTSTLVIKN 577
Query: 455 LPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYTKFK 509
+P+ +L+ALF+ +G++ + +P VEF +AK A +L+ T
Sbjct: 578 VPFEVSKKELQALFKSYGNIKSLRMPRKADRHTRGFAFVEFRSTAEAKEAKQALSQTHLL 637
Query: 510 EVPLYLEW 517
L +E+
Sbjct: 638 GRHLVIEY 645
>gi|346973867|gb|EGY17319.1| multiple RNA-binding domain-containing protein [Verticillium
dahliae VdLs.17]
Length = 866
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 173/324 (53%), Gaps = 32/324 (9%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R ILVKN P+ T +L+ LF G + RVL+PP +V++ Q KAAF LA
Sbjct: 519 RGDSTILVKNFPHGTTLEELRTLFAEHGTVLRVLMPPSKTIAIVQY-APGQGKAAFGRLA 577
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT-AEEDNQQGVP 563
Y + K+ L+LE P+ +F G ++ + T A+ D GV
Sbjct: 578 YRRIKDSVLFLEKGPKDLF---------------------GPDDAVQVTPAQGDQPAGVQ 616
Query: 564 E--VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
+ V + +E D++ E +L+++NLNF++T + + FK S V K D K P
Sbjct: 617 KLNVTQLLERDDQEEEVVGQSLFVRNLNFSTTSEGLTNAFKSLEGFVSAKVKTKTDAKKP 676
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
GQ LSMG+GFV F + E+ A+K + LD H + ++ S+R +A +R+
Sbjct: 677 GQVLSMGFGFVAFRSSEAAQAAIKAMDGQVLDAHTLSVRASHRG--QDAAEERRREDKAK 734
Query: 682 KQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
G +KI+V+N+PF+ + E+ LF +G L+ VRLPKKM S RGF F EF T
Sbjct: 735 MMAGQRTKIVVKNLPFEISKKELRALFATYGTLRAVRLPKKMGQS--TRGFAFAEFSTPK 792
Query: 740 EAKRAMKALCQSTHLYGRRLVLEW 763
EA+ A+ AL Q THL GRRLVL++
Sbjct: 793 EAQNAIDAL-QHTHLLGRRLVLDY 815
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I ++ R+F RNL+++V+EDDL FE+YG + EV +P+ K + +KGFA V+F + A
Sbjct: 336 IRQTARLFARNLAFSVSEDDLRDHFEQYGEVEEVHIPVAK-SGTSKGFAYVSFASADAAV 394
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENE 419
A+Q DG F GR+LH++P + ++
Sbjct: 395 TAFQSSDGQTFQGRLLHVLPAAARRDQ 421
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 128/322 (39%), Gaps = 47/322 (14%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNK 279
KR TI+VKN P G ++L+ F + T L + K A + K
Sbjct: 517 QKRGDSTILVKNFPHGTTLEELRTLF------AEHGTVLRVLMPPSKTIAIVQYAPGQGK 570
Query: 280 SFW--------KGKQLNIYKYSKD----NSAKYSGAADDNNNASMENIKAKHWKSQEDSV 327
+ + K L + K KD + A A + A ++ + ++D
Sbjct: 571 AAFGRLAYRRIKDSVLFLEKGPKDLFGPDDAVQVTPAQGDQPAGVQKLNVTQLLERDD-- 628
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-------GF 380
Q E + +S +FVRNL+++ T + LT F+ V + +TD K GF
Sbjct: 629 QEEEVVGQS--LFVRNLNFSTTSEGLTNAFKSLEGF--VSAKVKTKTDAKKPGQVLSMGF 684
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQ 440
V F E A A + +DG V L + ++ R+ D
Sbjct: 685 GFVAFRSSEAAQAAIKAMDGQVLDAHTLSVRASHRGQD---------AAEERRREDKAKM 735
Query: 441 VVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT----GLVEFLQKNQ 495
+ R+K I+VKNLP+ +L+ALF +G L V +P G + EF +
Sbjct: 736 MAGQRTK--IVVKNLPFEISKKELRALFATYGTLRAVRLPKKMGQSTRGFAFAEFSTPKE 793
Query: 496 AKAAFNSLAYTKFKEVPLYLEW 517
A+ A ++L +T L L++
Sbjct: 794 AQNAIDALQHTHLLGRRLVLDY 815
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
I+ K F G VTDV++ RR ++G+ + A+ A+ YFN +Y+ SR
Sbjct: 24 ISDADFKKHFSAGGREVTDVKVILP-----RRIGYVGFKTSEDAKKAVRYFNKSYIRMSR 78
Query: 88 IKVEKCSNLGDTTKPKSW 105
I+V+ + D ++W
Sbjct: 79 IEVQLARPIADPALKRNW 96
>gi|255075605|ref|XP_002501477.1| predicted protein [Micromonas sp. RCC299]
gi|226516741|gb|ACO62735.1| predicted protein [Micromonas sp. RCC299]
Length = 951
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 191/352 (54%), Gaps = 25/352 (7%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS IL+KNLP+ + +L+ L E FG + R+++P +VE+L+ A+ AF LA
Sbjct: 586 RSNVAILLKNLPFESEVNELRGLCERFGGVARMVLPDTKTIAVVEWLEPGDARKAFKGLA 645
Query: 505 YTKFKEVPLYLEWAPEGVFA---EAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQ-Q 560
Y +++ VP+Y+EWAPEG+F + + + G G ++ +E A + + +
Sbjct: 646 YKRYRHVPIYVEWAPEGIFTGDQPVGTVNGAPARTPKIDGGGLGLQKMRERDAIVNAKAK 705
Query: 561 GVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK-----CGPIASVTVARK 615
+ +++ D E T L++K L+FN+T+ S+R HF + G + + TVA +
Sbjct: 706 NSDDDDDDTAGDAE-----ATRLFVKGLSFNTTDASLRAHFLRAAAAASGRVLAATVATQ 760
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR-----NLESEA 670
K P G LS GYGFV+F + + A + +Q LD + L+ S+R
Sbjct: 761 KGPG--GANLSRGYGFVEFDSPGAARSAKRAMQGKELDGRALRLEISSRGGGGGGGGGGG 818
Query: 671 TTVKRKSSNVAKQT-GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
+ V K T +KI+VRN+ F+A + ++++LF FG LK RLPKK GS HRG
Sbjct: 819 GGDDKDKDKVPKGTSATKIVVRNVAFEATKRDIQKLFNPFGTLKSCRLPKKFDGS--HRG 876
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
F FVE TK EA A THLYGRRL +E A E+D+VE IR++T F
Sbjct: 877 FAFVELSTKREAS-AALEALAGTHLYGRRLTIERAAESDDVETIREKTAARF 927
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 67/94 (71%)
Query: 321 KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGF 380
K +E + + E +AE+GR+FVRNL +T TE+++ F YG LA V + DK T ++KG
Sbjct: 362 KVEEVTAEDMEAVAETGRLFVRNLPFTATEEEVAAHFAPYGNLAGVFILADKATKRSKGL 421
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGK 414
A +T+ +PE+A++A + LDG++F GR++HL+P +
Sbjct: 422 AYITYALPENASRAMEELDGSIFQGRLIHLLPAR 455
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 60/91 (65%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++L+ F E+G VTDV++ T +GK R+ AF+GY A AL+YF+NT++ +SR+
Sbjct: 38 LKEDRLREHFAERGEVTDVKILKTGDGKSRQMAFVGYKTTADAVKALEYFHNTFIDTSRV 97
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLH 119
+VE + P+ WSK++ SSA+++ H
Sbjct: 98 QVEYARAVKSAQLPRPWSKHSEGSSAHRRTH 128
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Query: 540 EEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRR 599
E+ + +KK +E + P+VEE ED E E L+++NL F +TE+ +
Sbjct: 338 EKADASTPDKKPKATDEPKKDDKPKVEEVTAEDMEAVAE-TGRLFVRNLPFTATEEEVAA 396
Query: 600 HFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
HF G +A V + K K S G ++ + E+ ++A++ L S I L
Sbjct: 397 HFAPYGNLAGVFILADKATKR-----SKGLAYITYALPENASRAMEELDGSIFQGRLIHL 451
Query: 660 KRSNRNLESEATTVKRKSSNVAKQTGS 686
+ R +A N + G+
Sbjct: 452 LPARRPPSGDAVGANLNGENFNGEDGA 478
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 573 EEREPEPDTT-LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
EE+EP P ++ L +KN+ + ED +R HF + G + V + + D K S F
Sbjct: 18 EEQEPAPPSSRLCVKNIPKHLKEDRLREHFAERGEVTDVKILKTGDGK------SRQMAF 71
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIEL 659
V + T +AL+ N+ +D ++++
Sbjct: 72 VGYKTTADAVKALEYFHNTFIDTSRVQV 99
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 13/155 (8%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKY-----GPLAEVILPIDKE---TDKTKGFALVTF 385
AE+ R+FV+ LS+ T+ L F + G + + K + ++G+ V F
Sbjct: 718 AEATRLFVKGLSFNTTDASLRAHFLRAAAAASGRVLAATVATQKGPGGANLSRGYGFVEF 777
Query: 386 LMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
P A A + + G GR L L + + G ++V +
Sbjct: 778 DSPGAARSAKRAMQGKELDGRALRL-----EISSRGGGGGGGGGGGGGDDKDKDKVPKGT 832
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP 480
S I+V+N+ + D++ LF PFG L +P
Sbjct: 833 SATKIVVRNVAFEATKRDIQKLFNPFGTLKSCRLP 867
>gi|67623683|ref|XP_668124.1| RNA-binding domain protein [Cryptosporidium hominis TU502]
gi|54659302|gb|EAL37885.1| RNA-binding domain protein [Cryptosporidium hominis]
Length = 800
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 184/334 (55%), Gaps = 35/334 (10%)
Query: 445 RSKRIILVKNLPYRTLP-TDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
RSK I++K+LP + +DL+ + PFG + R+ + P +V+FL ++ A++AF L
Sbjct: 482 RSKDTIIIKHLPSDQVTLSDLQKICSPFGRINRLCLSPSKTIAIVQFLDESSAESAFKRL 541
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
A+ +FK VPLY+EWAP +F E K KE E V
Sbjct: 542 AFKRFKSVPLYIEWAPVNLFVSETETQKEKETE-----------------------SKVV 578
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
+E ++ +E+ + ++IKNL+F++T ++ F K T+ K S G
Sbjct: 579 NKKEILDMNEDLDNTNAVHVFIKNLSFDTTNKALENLFSKVEGFRKATITMKTHSDSDGN 638
Query: 624 FL--SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES---EATTV---KR 675
+ SMGYGF++F T E+ + +K +Q+ +LD H +ELK S ++ S E T++ K+
Sbjct: 639 IIKKSMGYGFLEFKTSENAKECVKRMQSITLDGHTLELKISKKSKTSQVDEKTSLPYGKQ 698
Query: 676 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
+ K +K+L++N+PFQA +S++ LF + G + +R+PKK G ++G+ F+EF
Sbjct: 699 LTDIGVKNVSNKLLIKNLPFQATKSDIMSLFNSVGTVTSIRIPKK--SDGTNKGYCFIEF 756
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN 769
+ K EA A++ Q THLYGR L++E AE D+
Sbjct: 757 LGKLEAISALEQF-QHTHLYGRHLIIEVAENDDD 789
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 290 YKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA----ESGRIFVRNLS 345
+ S DNS+ +D +S N ++ + E++V E + E+ R+ V N+S
Sbjct: 233 FNESDDNSSTNVSESD---LSSESNTDSEDNQELEEAVDIGEQMVTSPTETSRLMVVNIS 289
Query: 346 YTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLG 405
Y+ TE+DL K F K+G + V + E+ +KG+ V + EHA A ++ G
Sbjct: 290 YSTTEEDLNKFFSKWGEVKSVNIIRSPESGVSKGYGFVQYEFVEHAVSALSQAHLSLLHG 349
Query: 406 RMLHLIPG--KPKE------NEGNVDGKVHCCISERKLDAFNQ 440
R+L + P KP + NE NV VH S+ KL A N+
Sbjct: 350 RVLRVSPAFNKPTKTITDSFNESNV--IVH---SDYKLKALNK 387
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 58 RRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQK 117
R+F F+G++ E+ A+ L+YFN T++ + RI V+ G P+ WSKY+ SS Y K
Sbjct: 64 RKFGFVGFYSEEDAKKVLEYFNGTFIDTCRINVQYAFPPGSDLLPRPWSKYSVGSSQYNK 123
Query: 118 LHNI 121
+NI
Sbjct: 124 RNNI 127
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 131/322 (40%), Gaps = 44/322 (13%)
Query: 222 RQYHTIVVKNLPAG-VKKKDLKAYFKP------LPLASVRTTFLGMAYIGFKDEKNCNKA 274
R TI++K+LP+ V DL+ P L L+ +T +A + F DE + A
Sbjct: 482 RSKDTIIIKHLPSDQVTLSDLQKICSPFGRINRLCLSPSKT----IAIVQFLDESSAESA 537
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ----EDSVQFA 330
K +F + K + +Y A + + E K K +S+ ++ +
Sbjct: 538 F-KRLAFKRFKSVPLY---------IEWAPVNLFVSETETQKEKETESKVVNKKEILDMN 587
Query: 331 EDIAESG--RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETD-------KTKGFA 381
ED+ + +F++NLS+ T L LF K + + + +D K+ G+
Sbjct: 588 EDLDNTNAVHVFIKNLSFDTTNKALENLFSKVEGFRKATITMKTHSDSDGNIIKKSMGYG 647
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQV 441
+ F E+A + + + G L L K K VD K ++ D +
Sbjct: 648 FLEFKTSENAKECVKRMQSITLDGHTLELKISK-KSKTSQVDEKTSLPYGKQLTDIGVKN 706
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQA 496
V + +L+KNLP++ +D+ +LF G + + +P +EFL K +A
Sbjct: 707 VSNK----LLIKNLPFQATKSDIMSLFNSVGTVTSIRIPKKSDGTNKGYCFIEFLGKLEA 762
Query: 497 KAAFNSLAYTKFKEVPLYLEWA 518
+A +T L +E A
Sbjct: 763 ISALEQFQHTHLYGRHLIIEVA 784
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 544 EGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTT--LYIKNLNFNSTEDSIRRHF 601
E + + NT EDNQ E+EE V+ E+ P T L + N+++++TE+ + + F
Sbjct: 246 ESDLSSESNTDSEDNQ----ELEEAVDIGEQMVTSPTETSRLMVVNISYSTTEEDLNKFF 301
Query: 602 KKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
K G + SV + R SP +S GYGFVQ+ E + A+ L + L
Sbjct: 302 SKWGEVKSVNIIR-----SPESGVSKGYGFVQY---EFVEHAVSALSQAHL 344
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 12/79 (15%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELK---FVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
S+++V NI + + ++ + F +GE+K +R P+ SG+ +G+GFV++ +
Sbjct: 281 SRLMVVNISYSTTEEDLNKFFSKWGEVKSVNIIRSPE----SGVSKGYGFVQY---EFVE 333
Query: 743 RAMKALCQS--THLYGRRL 759
A+ AL Q+ + L+GR L
Sbjct: 334 HAVSALSQAHLSLLHGRVL 352
>gi|66475966|ref|XP_627799.1| 5x RRM. Mrd1p like, splicing related [Cryptosporidium parvum Iowa
II]
gi|32399047|emb|CAD98287.1| RNA-binding domain protein [Cryptosporidium parvum]
gi|46229208|gb|EAK90057.1| 5x RRM. Mrd1p like, splicing related [Cryptosporidium parvum Iowa
II]
Length = 806
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 186/334 (55%), Gaps = 35/334 (10%)
Query: 445 RSKRIILVKNLPYRTLP-TDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
RSK I++K+LP + +DL+ + PFG + R+ + P +V+FL+++ A++AF L
Sbjct: 488 RSKDTIIIKHLPSDQVTLSDLQKICSPFGRINRLCLSPSKTIAIVQFLEESSAESAFKRL 547
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
A+ +FK VPLY+EWAP +F E K KE E ++ N++ +
Sbjct: 548 AFKRFKSVPLYIEWAPVNLFVSETETQKEKETE-----------------SKVVNKKEIL 590
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
++ E+++ +++KNL+F++T ++ F K T+ K S G
Sbjct: 591 DINEDLDNTNA------VHVFVKNLSFDTTNKALENLFSKVEGFRKATITMKTHSDSDGN 644
Query: 624 FL--SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES---EATTVKRKSS 678
+ SMGYGF++F T E+ + +K +Q+ +LD H +ELK S ++ S E T++ S
Sbjct: 645 IIKKSMGYGFLEFKTSENAKECIKRMQSVTLDGHTLELKISKKSKTSQVDEKTSLPYGSQ 704
Query: 679 NV---AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
K +K+L++N+PFQA +S++ LF + G + +R+PKK G ++G+ F+EF
Sbjct: 705 LTDIGVKNVSNKLLIKNLPFQATKSDIMSLFNSVGTVTSIRIPKK--SDGTNKGYCFIEF 762
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN 769
+ K EA A++ Q THLYGR L++E AE D+
Sbjct: 763 LGKLEAISALEQF-QHTHLYGRHLIIEVAENDDD 795
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 17/129 (13%)
Query: 324 EDSVQFAEDIA----ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKG 379
E+ V E I E+ R+ V N+SY+ TE+DL K F K+G + V + E+ +KG
Sbjct: 270 EEVVDIGEQIVTSPMETSRLMVVNISYSTTEEDLNKFFSKWGEVKSVNIIRSPESGVSKG 329
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPG--KPKE------NEGNVDGKVHCCIS 431
+ V + EHA A ++ GR+L + P KP + NE NV VH S
Sbjct: 330 YGFVQYEFVEHAVSALSQAHLSLLHGRVLRVSPAFNKPTKTITDSFNESNV--IVH---S 384
Query: 432 ERKLDAFNQ 440
+ KL A N+
Sbjct: 385 DYKLKALNK 393
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 58 RRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQK 117
R+F F+G++ E+ A+ L+YFN T++ + RI V+ G P+ WSKY+ SS Y +
Sbjct: 64 RKFGFVGFYSEEDAKKVLEYFNGTFIDTCRINVQYAFPPGSDLLPRPWSKYSIGSSQYNR 123
Query: 118 LHNI 121
+NI
Sbjct: 124 RNNI 127
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 17/192 (8%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETD-------KTKGFALVTFLMPEHA 391
+FV+NLS+ T L LF K + + + +D K+ G+ + F E+A
Sbjct: 604 VFVKNLSFDTTNKALENLFSKVEGFRKATITMKTHSDSDGNIIKKSMGYGFLEFKTSENA 663
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
+ + + G L L K K VD K + D + V + +L
Sbjct: 664 KECIKRMQSVTLDGHTLELKISK-KSKTSQVDEKTSLPYGSQLTDIGVKNVSNK----LL 718
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYT 506
+KNLP++ +D+ +LF G + + +P +EFL K +A +A +T
Sbjct: 719 IKNLPFQATKSDIMSLFNSVGTVTSIRIPKKSDGTNKGYCFIEFLGKLEAISALEQFQHT 778
Query: 507 KFKEVPLYLEWA 518
L +E A
Sbjct: 779 HLYGRHLIIEVA 790
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 544 EGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTT--LYIKNLNFNSTEDSIRRHF 601
E + + NT +DNQ E+EE V+ E+ P T L + N+++++TE+ + + F
Sbjct: 252 ESDLSSESNTDSDDNQ----ELEEVVDIGEQIVTSPMETSRLMVVNISYSTTEEDLNKFF 307
Query: 602 KKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
K G + SV + R SP +S GYGFVQ+ E + A+ L + L
Sbjct: 308 SKWGEVKSVNIIR-----SPESGVSKGYGFVQY---EFVEHAVSALSQAHL 350
>gi|4582489|emb|CAB40378.1| putative protein [Arabidopsis thaliana]
gi|7268757|emb|CAB78963.1| putative protein [Arabidopsis thaliana]
Length = 772
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 196/365 (53%), Gaps = 48/365 (13%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLV---------------E 489
RSK I+LVKNLP+ + +L +F FG L ++++PP LV
Sbjct: 406 RSKHILLVKNLPFASTEKELAQMFGKFGSLDKIILPPTKTMALVLFFPCVLRQYIGRIAV 465
Query: 490 FLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEK 549
FL+ +A+AA +AY ++K+ PLYLEWAP + + KN + E +
Sbjct: 466 FLEPAEARAALKGMAYKRYKDAPLYLEWAPGNIL-----------EPKNLPDTNEERSDI 514
Query: 550 KENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC---GP 606
+EN N + E++ +V E ++ +L NL+F +T++ +++HF K G
Sbjct: 515 EENGVRRVNLEQQVEIDPDVTETKKVAY---VSLNWYNLSFKTTDEGLKKHFTKLVKQGK 571
Query: 607 IASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE-LKRSNRN 665
I SVT+ + K + ++LS GYGFV+F + E+ + LQ LD + L
Sbjct: 572 ILSVTIIKHKKNE---KYLSSGYGFVEFDSVETATSVYRDLQLIGLDGVEWHFLLWQGTV 628
Query: 666 LESEATTVK----RKSSNVAKQTG-----SKILVRNIPFQAKQSEVEELFKAFGELKFVR 716
L+ A ++ ++S V K + +K+ V+NI F+A + E+ +LF FG++K +R
Sbjct: 629 LDGHALILRFCENKRSDKVGKDSNKDKPCTKLHVKNIAFEATKRELRQLFSPFGQIKSMR 688
Query: 717 LPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKR 776
LPKK +G + G+ FVEF+TK EA A KAL STH YGR LVLEWA + +++E IRKR
Sbjct: 689 LPKKNIGQ--YAGYAFVEFVTKQEALNAKKALA-STHFYGRHLVLEWANDDNSMEAIRKR 745
Query: 777 TNRYF 781
+ F
Sbjct: 746 SAAKF 750
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 34/180 (18%)
Query: 52 TTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYAPD 111
+ +GK R+F FIG+ +AQ A+ YFNNTY+ +S I VE +GD P+ WS+
Sbjct: 3 SNDGKSRQFGFIGFRSAQEAQQAIKYFNNTYLGTSLIIVEIAHKVGDENAPRPWSRL--- 59
Query: 112 SSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQLHGKDVSKLL-------PL 164
S ++ + + LK + K K K +DP F +FL++H + SK+ P
Sbjct: 60 SHKKEEEAKKSSSEGLKDGNAKGGKKRKAEVDDPEFQEFLEVHQRSKSKIWSNDMSIPPA 119
Query: 165 SNKDGEEK------------------------EEENEDESNNQIAHADISDMEYLKLKTK 200
+ G+EK + E +S A D+SDMEY K + K
Sbjct: 120 PEETGKEKVLVKKADEQIVSNGVEPKKAKKSSDTEKTKKSKVVAASDDVSDMEYFKSRIK 179
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 148/356 (41%), Gaps = 44/356 (12%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYF------KPLPLASVRTTFLGM-------AYIG---- 264
R H ++VKNLP +K+L F + L +T L + YIG
Sbjct: 406 RSKHILLVKNLPFASTEKELAQMFGKFGSLDKIILPPTKTMALVLFFPCVLRQYIGRIAV 465
Query: 265 FKDEKNCNKALNKNKSFWKGKQLNIY-KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
F + AL K ++ + K +Y +++ N + D N S +
Sbjct: 466 FLEPAEARAAL-KGMAYKRYKDAPLYLEWAPGNILEPKNLPDTNEERSDIEENGVRRVNL 524
Query: 324 EDSVQFAEDIAESGRI-FVR----NLSYTVTEDDLTKLFEKY---GPLAEVILPIDKETD 375
E V+ D+ E+ ++ +V NLS+ T++ L K F K G + V + K+ +
Sbjct: 525 EQQVEIDPDVTETKKVAYVSLNWYNLSFKTTDEGLKKHFTKLVKQGKILSVTIIKHKKNE 584
Query: 376 K--TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNV-DGK---VHCC 429
K + G+ V F E AT Y+ L G H + +G V DG + C
Sbjct: 585 KYLSSGYGFVEFDSVETATSVYRDLQLIGLDGVEWHFLLW-----QGTVLDGHALILRFC 639
Query: 430 ISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP-----YGI 484
++R + + + VKN+ + +L+ LF PFG + + +P Y
Sbjct: 640 ENKRSDKVGKDSNKDKPCTKLHVKNIAFEATKRELRQLFSPFGQIKSMRLPKKNIGQYAG 699
Query: 485 TGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEA-KEKSKGKEKEKNE 539
VEF+ K +A A +LA T F L LEWA + EA +++S K E+N+
Sbjct: 700 YAFVEFVTKQEALNAKKALASTHFYGRHLVLEWANDDNSMEAIRKRSAAKFDEEND 755
>gi|452844020|gb|EME45954.1| hypothetical protein DOTSEDRAFT_168162 [Dothistroma septosporum
NZE10]
Length = 822
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 187/333 (56%), Gaps = 36/333 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F + R ILVKN+P +LK LFE GD+ + L+PP G +VEF
Sbjct: 473 LDSFKK--SHRGDTAILVKNIPADCSKDELKRLFEEQGDVHKFLMPPAGTIAIVEFANAA 530
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
Q KAAF +LAY + K L+LE AP+ +F AK S +E G EG K +TA
Sbjct: 531 QCKAAFGTLAYRRVKSSMLFLEKAPKDLFT-AKPAS-------TDETGPEGVS--KVSTA 580
Query: 555 E-EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
+ +D VPE V TL+++NLNF++T + F S V
Sbjct: 581 DFKDADHTVPETTGTV------------TLFVRNLNFSTTTKILSEAFTPLDGFLSARVK 628
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
++DPK LSMG+GF +F + + AL+ + +L+ H+++++ S++ ++
Sbjct: 629 TREDPKR--GTLSMGFGFAEFRSTKQAQAALETMDGYTLEGHKLQVRASHKGADAAE--- 683
Query: 674 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
+R+ ++VAK++ +KI+++N+PF+ + +V LF A+G+L+ VR+PKK+ + RGF
Sbjct: 684 ERRKADVAKRSAARSTKIIIKNLPFETTKKDVRALFGAYGQLRSVRVPKKIDRAA--RGF 741
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
F EF T EA+ AM AL + THL GRRLVL++
Sbjct: 742 AFAEFTTAKEAQSAMDAL-RDTHLLGRRLVLDF 773
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 56/89 (62%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E + +S R+FVRNL Y ++DL FE++G L EV + +DK+T KGFA + + P+
Sbjct: 295 EAVRKSMRLFVRNLPYDAQKEDLEAEFERFGNLEEVHIALDKKTGTAKGFAFIQYSDPDS 354
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
+ QA+ DG F GR+LH++PG K +
Sbjct: 355 SEQAFVDRDGQTFQGRLLHILPGTAKRED 383
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 122/319 (38%), Gaps = 59/319 (18%)
Query: 227 IVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCNKALNK- 277
I+VKN+PA K +LK F+ +P A +A + F + C A
Sbjct: 486 ILVKNIPADCSKDELKRLFEEQGDVHKFLMPPAGT------IAIVEFANAAQCKAAFGTL 539
Query: 278 NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG 337
K L + K KD + D+ + + +K + +V + +
Sbjct: 540 AYRRVKSSMLFLEKAPKDLFTAKPASTDETGPEGVSKVSTADFKDADHTVP---ETTGTV 596
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPID-------------KETDKTKGFALVT 384
+FVRNL+++ T TK+ L+E P+D K + GF
Sbjct: 597 TLFVRNLNFSTT----TKI------LSEAFTPLDGFLSARVKTREDPKRGTLSMGFGFAE 646
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEA 444
F + A A + +DG G L + K ER+ + A
Sbjct: 647 FRSTKQAQAALETMDGYTLEGHKLQV----------RASHKGADAAEERRKADVAKRSAA 696
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKA 498
RS +II +KNLP+ T D++ALF +G L V VP G EF +A++
Sbjct: 697 RSTKII-IKNLPFETTKKDVRALFGAYGQLRSVRVPKKIDRAARGF-AFAEFTTAKEAQS 754
Query: 499 AFNSLAYTKFKEVPLYLEW 517
A ++L T L L++
Sbjct: 755 AMDALRDTHLLGRRLVLDF 773
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 121/332 (36%), Gaps = 71/332 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N+ ++D+L +LFE+ G + + ++P A+V F A+ L
Sbjct: 486 ILVKNIPADCSKDELKRLFEEQGDVHKFLMP------PAGTIAIVEFANAAQCKAAFGTL 539
Query: 399 DGTVFLGRML-------HLIPGKPKE-NEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
ML L KP +E +G ++ K DA + V E +
Sbjct: 540 AYRRVKSSMLFLEKAPKDLFTAKPASTDETGPEGVSKVSTADFK-DADHTVPETTGTVTL 598
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGIT----GLVEFLQKNQAKAAFN 501
V+NL + T L F P V P G G EF QA+AA
Sbjct: 599 FVRNLNFSTTTKILSEAFTPLDGFLSARVKTREDPKRGTLSMGFGFAEFRSTKQAQAALE 658
Query: 502 SL-AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQ 560
++ YT EG + + KG + EE +K + A
Sbjct: 659 TMDGYTL------------EGHKLQVRASHKG---------ADAAEERRKADVA------ 691
Query: 561 GVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
+R T + IKNL F +T+ +R F G + SV V +K D
Sbjct: 692 -------------KRSAARSTKIIIKNLPFETTKKDVRALFGAYGQLRSVRVPKKID--- 735
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
+ G+ F +F T + A+ L+++ L
Sbjct: 736 ---RAARGFAFAEFTTAKEAQSAMDALRDTHL 764
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 76/197 (38%), Gaps = 34/197 (17%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP-LASVR----------TTFLGMAYIGFKDEKNCNKA 274
T+ V+NL K L F PL S R T +G + F+ K A
Sbjct: 597 TLFVRNLNFSTTTKILSEAFTPLDGFLSARVKTREDPKRGTLSMGFGFAEFRSTKQAQAA 656
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
L G L +K S K + AA++ A + A A
Sbjct: 657 LET----MDGYTLEGHKLQVRASHKGADAAEERRKADVAKRSA----------------A 696
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-TKGFALVTFLMPEHATQ 393
S +I ++NL + T+ D+ LF YG L V +P K+ D+ +GFA F + A
Sbjct: 697 RSTKIIIKNLPFETTKKDVRALFGAYGQLRSVRVP--KKIDRAARGFAFAEFTTAKEAQS 754
Query: 394 AYQHLDGTVFLGRMLHL 410
A L T LGR L L
Sbjct: 755 AMDALRDTHLLGRRLVL 771
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 28 KITQEQLKAKFEEKG-TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
K ++ +L+ F + +TD+ KY + RRF ++G+ + AQA + YFN TYV S
Sbjct: 15 KFSETELRKHFSQNDRLITDI--KYFPD---RRFGYVGFKTHEDAQAVVKYFNRTYVRMS 69
Query: 87 RIKVE 91
RI VE
Sbjct: 70 RIGVE 74
>gi|429859384|gb|ELA34169.1| pre-rRNA processing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 866
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 186/334 (55%), Gaps = 32/334 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LDAF + R ILVKN P+ T +L+ +FE G + RVL+PP G +VEF Q
Sbjct: 510 LDAFKS--QKRGDTTILVKNFPFGTTMEELRTMFEEHGTVLRVLMPPSGTIAIVEFAQAA 567
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
AKAAF LAY + K+ L+LE P+ +F + N +G+E
Sbjct: 568 HAKAAFAKLAYRRIKDTVLFLEKGPKDLFK--------NDASVNIMQGKE---------- 609
Query: 555 EEDNQQGVPE--VEENVEEDEEREPEPDTT-LYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
D GV + V E +E E+ E + TT L+++NLNF++T + + FK S
Sbjct: 610 --DRPVGVQKLSVTELLERGEQGEADIQTTSLFVRNLNFSTTTEKLAETFKPLDGFVSAR 667
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
V K DPK PGQ LSMG+GFV F T+E + ALK + LD H + +K S++ +A
Sbjct: 668 VKTKMDPKKPGQVLSMGFGFVVFKTKEQASTALKSMDGFVLDGHTLAVKASHKG--QDAA 725
Query: 672 TVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
+R+ K G +KI+++N+PF+A + ++ LF +G+L+ VRLPKK S RG
Sbjct: 726 EERRREDKARKAAGQRTKIVIKNLPFEATKKDIRTLFSTYGQLRAVRLPKKFGNS--TRG 783
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
F F EF+T EA+ A+ AL + THL GR+LVL++
Sbjct: 784 FAFAEFVTPREAENALNAL-RDTHLLGRKLVLDY 816
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 321 KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGF 380
K+ ED I + R+F RNL+Y+V E+DL FE++G L EV LP+ T +KG+
Sbjct: 323 KAAEDEDDTLATIKRTSRLFARNLAYSVNEEDLRAHFEQFGELQEVHLPV-TATGASKGY 381
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
A+V F + A A+Q DG F GR+LH++P K N G
Sbjct: 382 AMVQFTNADSAVTAFQSSDGQTFQGRLLHILPAAEKRNTG 421
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 81/202 (40%), Gaps = 36/202 (17%)
Query: 223 QYHTIVVKNLPAGVKKKDLKAYFKPLP---LASVRTTF----------LGMAYIGFKDEK 269
Q ++ V+NL + L FKPL A V+T +G ++ FK ++
Sbjct: 635 QTTSLFVRNLNFSTTTEKLAETFKPLDGFVSARVKTKMDPKKPGQVLSMGFGFVVFKTKE 694
Query: 270 NCNKALNKNKSF-WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQ 328
+ AL F G L + AS + A + +ED +
Sbjct: 695 QASTALKSMDGFVLDGHTLAV-------------------KASHKGQDAAEERRREDKAR 735
Query: 329 FAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP 388
A + +I ++NL + T+ D+ LF YG L V LP K + T+GFA F+ P
Sbjct: 736 KA--AGQRTKIVIKNLPFEATKKDIRTLFSTYGQLRAVRLP-KKFGNSTRGFAFAEFVTP 792
Query: 389 EHATQAYQHLDGTVFLGRMLHL 410
A A L T LGR L L
Sbjct: 793 REAENALNALRDTHLLGRKLVL 814
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 130/324 (40%), Gaps = 49/324 (15%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNK 279
KR TI+VKN P G ++L+ F+ +R I + A
Sbjct: 516 QKRGDTTILVKNFPFGTTMEELRTMFEEHGTV-LRVLMPPSGTIAIVEFAQAAHAKAAFA 574
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADD--NNNASMENIKAKHWKS---QEDSV------- 327
Y+ KD D N+AS+ ++ K + Q+ SV
Sbjct: 575 K-------LAYRRIKDTVLFLEKGPKDLFKNDASVNIMQGKEDRPVGVQKLSVTELLERG 627
Query: 328 -QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL-----AEVILPIDKETDK---TK 378
Q DI ++ +FVRNL+++ T + KL E + PL A V +D + +
Sbjct: 628 EQGEADI-QTTSLFVRNLNFSTTTE---KLAETFKPLDGFVSARVKTKMDPKKPGQVLSM 683
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAF 438
GF V F E A+ A + +DG V G L + K + D R+ D
Sbjct: 684 GFGFVVFKTKEQASTALKSMDGFVLDGHTLAV-----KASHKGQD----AAEERRREDKA 734
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT----GLVEFLQK 493
+ R+K I++KNLP+ D++ LF +G L V +P +G + EF+
Sbjct: 735 RKAAGQRTK--IVIKNLPFEATKKDIRTLFSTYGQLRAVRLPKKFGNSTRGFAFAEFVTP 792
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEW 517
+A+ A N+L T L L++
Sbjct: 793 REAENALNALRDTHLLGRKLVLDY 816
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 28 KITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
KIT + + F G VTDV++ RR ++GY D A A+ YFN +YV S
Sbjct: 24 KITDAEFRKHFSAGGREVTDVKVIPQ-----RRIGYVGYKTPDVAAKAVKYFNKSYVRMS 78
Query: 87 RIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKND 144
RI VE + D K+ P S + + AP L P +D KK K +
Sbjct: 79 RINVELARPIADPALQKTRGVSGP-SFVAKMSDSAAP---LPPSAEQDDGSKKKRKRE 132
>gi|258565855|ref|XP_002583672.1| multiple RNA-binding domain-containing protein 1 [Uncinocarpus
reesii 1704]
gi|237907373|gb|EEP81774.1| multiple RNA-binding domain-containing protein 1 [Uncinocarpus
reesii 1704]
Length = 772
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 178/329 (54%), Gaps = 29/329 (8%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F Q R ILVKN + DLK LF+P+G + R+L+PP G +VEF +
Sbjct: 467 LDSFKQ--RERGNTAILVKNFSFGVKAEDLKKLFDPYGQIIRLLMPPTGTIAIVEFSMPD 524
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+ + AF LAY K + L+LE AP+ +F EG+
Sbjct: 525 ECQKAFRGLAYRKLGDSILFLEKAPKDLF--------------------EGKPMAPVTVQ 564
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+ E + E+ +TLY++NLNF++T + FK S V
Sbjct: 565 PQRVVGPTFSTSETFKAGEQEAGVESSTLYVRNLNFSTTTVGLTDLFKPLDGFLSAQVKT 624
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PG+ LSMG+GFV+F T+ AL + LD+H++ +K S++ +++ +
Sbjct: 625 KPDPKKPGERLSMGFGFVEFKTKAQAQAALAAMNGYKLDQHELVIKPSHKGMDAAEQQRR 684
Query: 675 RKSS--NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
++ N A++T KI+++N+PFQA + +++ LF A+G+L+ +R+PKK + RGF F
Sbjct: 685 EDTAKKNAARRT--KIIIKNLPFQATKKDIQSLFGAYGQLRSLRVPKKFDRTA--RGFAF 740
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVL 761
+F++ EA+ AM AL ++THL GRRLVL
Sbjct: 741 ADFVSAREAENAMDAL-RNTHLLGRRLVL 768
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Query: 326 SVQFAED-----IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGF 380
SVQ +D I E+GR+F+RNL Y TE+DL LF ++G + E+ + D +KGF
Sbjct: 279 SVQEVDDPNLHLIRETGRLFLRNLPYNTTEEDLRSLFTRFGKIEELHVAFDTRHSTSKGF 338
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
A F+ P+ A +AY+ LDG F GR++H++P K+
Sbjct: 339 AYAQFVDPDSAIEAYKELDGRDFQGRLMHILPASSKK 375
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 135/336 (40%), Gaps = 76/336 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N S+ V +DL KLF+ YG + +++P T A+V F MP+ +A++ L
Sbjct: 480 ILVKNFSFGVKAEDLKKLFDPYGQIIRLLMP------PTGTIAIVEFSMPDECQKAFRGL 533
Query: 399 ------DGTVFLGRML-HLIPGKPKE----NEGNVDGKVHCCISERKLDAFNQVVEARSK 447
D +FL + L GKP V G K VE+ +
Sbjct: 534 AYRKLGDSILFLEKAPKDLFEGKPMAPVTVQPQRVVGPTFSTSETFKAGEQEAGVESST- 592
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDLGRVLV--------PPYGIT---GLVEFLQKNQA 496
+ V+NL + T L LF+P V P ++ G VEF K QA
Sbjct: 593 --LYVRNLNFSTTTVGLTDLFKPLDGFLSAQVKTKPDPKKPGERLSMGFGFVEFKTKAQA 650
Query: 497 KAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEE 556
+AA ++ K + L ++ + +G+ + E++++E+TA++
Sbjct: 651 QAALAAMNGYKLDQHELVIKPSHKGM--------------------DAAEQQRREDTAKK 690
Query: 557 DNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK 616
+ + T + IKNL F +T+ I+ F G + S+ V +K
Sbjct: 691 NAAR-------------------RTKIIIKNLPFQATKKDIQSLFGAYGQLRSLRVPKKF 731
Query: 617 DPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
D + G+ F F + A+ L+N+ L
Sbjct: 732 D------RTARGFAFADFVSAREAENAMDALRNTHL 761
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 311 SMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPI 370
S + + A + +ED+ + ++ A +I ++NL + T+ D+ LF YG L + +P
Sbjct: 672 SHKGMDAAEQQRREDTAK--KNAARRTKIIIKNLPFQATKKDIQSLFGAYGQLRSLRVP- 728
Query: 371 DKETDKT-KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
K+ D+T +GFA F+ A A L T LGR L L
Sbjct: 729 -KKFDRTARGFAFADFVSAREAENAMDALRNTHLLGRRLVL 768
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 111/272 (40%), Gaps = 31/272 (11%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKP----LPLASVRTTFLGMAYIGFKDEKNCNKALNK 277
R I+VKN GVK +DLK F P + L T + + DE C KA +
Sbjct: 475 RGNTAILVKNFSFGVKAEDLKKLFDPYGQIIRLLMPPTGTIAIVEFSMPDE--CQKAF-R 531
Query: 278 NKSFWK--GKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA- 334
++ K L + K KD + G + + + + E + + E A
Sbjct: 532 GLAYRKLGDSILFLEKAPKD---LFEGKPMAPVTVQPQRVVGPTFSTSE-TFKAGEQEAG 587
Query: 335 -ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMP 388
ES ++VRNL+++ T LT LF+ + + K + GF V F
Sbjct: 588 VESSTLYVRNLNFSTTTVGLTDLFKPLDGFLSAQVKTKPDPKKPGERLSMGFGFVEFKTK 647
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
A A ++G L + P ++G + +R+ D + R+K
Sbjct: 648 AQAQAALAAMNGYKLDQHELVIKPS----HKG-----MDAAEQQRREDTAKKNAARRTK- 697
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVP 480
I++KNLP++ D+++LF +G L + VP
Sbjct: 698 -IIIKNLPFQATKKDIQSLFGAYGQLRSLRVP 728
>gi|303277453|ref|XP_003058020.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460677|gb|EEH57971.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 930
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 182/342 (53%), Gaps = 21/342 (6%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS IL+KNLPY +L+ + E FG + R ++P + E+L+ A+ AF LA
Sbjct: 579 RSGTAILLKNLPYEGDKGELRGMCERFGGVSRFVLPDTKTIAVCEWLEPPDARKAFKGLA 638
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y ++K VP+Y+EWAPEG+F ++ + G G K A + G
Sbjct: 639 YKRYKHVPIYVEWAPEGIF-----------RDDAPKGGPAGGPAKTPRAAAPADDGGGGG 687
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC-----GPIASVTVARKKDPK 619
E + + D E L++K L+F +++ ++R HF + G + + TVA ++ P
Sbjct: 688 GEGDGDGDVAVADEDVAKLFVKGLSFQTSDAALRAHFLRAASAAGGRVLAATVATQRGPG 747
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN 679
G LS G+GFV+ + + + +Q +L+ ++++ S +
Sbjct: 748 --GATLSRGFGFVELDSPGTARSVRRAMQGKTLEGRALKIEMSAGGASGGDGGDGGDAKV 805
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
+ +KI+VRN+ F+A + ++++LF FG LK RLPKK G+ HRGF FVE TK
Sbjct: 806 PKGFSATKIVVRNVAFEATKRDIQKLFNPFGALKSCRLPKKFDGN--HRGFAFVELSTKR 863
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
EA A++AL + THLYGR+LV+E A E D+VE R++T +F
Sbjct: 864 EATSALEAL-RGTHLYGRKLVIERAAEGDDVETTREKTAAHF 904
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 61/84 (72%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E +AE+GR+FVRNL +T TE+++ F K+G L V + +D+ T +KG A +T+ +PE+
Sbjct: 372 EAVAETGRLFVRNLPFTATEEEVAAHFAKHGALTAVHVIVDRTTRASKGLAYITYALPEN 431
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGK 414
AT A + +DG++F GR++HL+P K
Sbjct: 432 ATTAMREMDGSIFQGRLIHLLPAK 455
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 20/145 (13%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T+++L+ F E+G VTDV++ T++GK R AF+G+ E A AL+YF+NT+V +S+I
Sbjct: 47 LTRDRLREHFAERGEVTDVKILKTSDGKSRCMAFVGFKTEADATKALEYFDNTFVDTSKI 106
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG-------KKS 141
VE + + P+ WS+++ SSA+ K P PE D G KK+
Sbjct: 107 AVEYARAMKSSALPRPWSRHSEGSSAHAKATKPKPDAKAPPEADPDRFIGVRELKKMKKA 166
Query: 142 KN-------------DPTFSDFLQL 153
K DP ++F++L
Sbjct: 167 KQREYEAELDRQIAEDPKLAEFMRL 191
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
+I VRN+++ T+ D+ KLF +G L LP K +GFA V AT A +
Sbjct: 813 KIVVRNVAFEATKRDIQKLFNPFGALKSCRLP-KKFDGNHRGFAFVELSTKREATSALEA 871
Query: 398 LDGTVFLGRML 408
L GT GR L
Sbjct: 872 LRGTHLYGRKL 882
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
ED+E P P + L +KN+ + T D +R HF + G + V + + D K S
Sbjct: 27 EDDEPAP-PSSRLCVKNIPKHLTRDRLREHFAERGEVTDVKILKTSDGK------SRCMA 79
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
FV F T +AL+ N+ +D +I ++ + R ++S A
Sbjct: 80 FVGFKTEADATKALEYFDNTFVDTSKIAVEYA-RAMKSSA 118
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
VEE +D E E L+++NL F +TE+ + HF K G + +V V + ++
Sbjct: 363 VEEVTADDMEAVAE-TGRLFVRNLPFTATEEEVAAHFAKHGALTAVHVIVDRTTRA---- 417
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
S G ++ + E+ A++ + S I L + + R S ++
Sbjct: 418 -SKGLAYITYALPENATTAMREMDGSIFQGRLIHLLPAKHGIAGADGAGSRGGSEAEREA 476
Query: 685 GSK 687
G K
Sbjct: 477 GFK 479
>gi|345308678|ref|XP_001519607.2| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Ornithorhynchus anatinus]
Length = 454
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/335 (35%), Positives = 183/335 (54%), Gaps = 25/335 (7%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS I++KNLP +L +F+ FG L R V P+G+ G+V++++K AK AF +LA
Sbjct: 138 RSDDTIIIKNLPPSADEMELLEMFKKFGALLRFAVSPFGVMGIVQYMEKRAAKIAFKNLA 197
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y ++ VPLYLEWAP F + E + E E A Q PE
Sbjct: 198 YKRYNTVPLYLEWAPVKFFHDDVEPRLPNPVVQQEVAAE----------AASHTQTMAPE 247
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
EE E+D + ++YI+NLNF +T++ +R+ K + + + RK P G
Sbjct: 248 EEEEEEDDFK---SLHASVYIRNLNFKTTDNGLRKFLKDLPGLITCKIIRKDGPD--GNP 302
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS------S 678
LS G+GF +F T + A+K L S +D +E+K + N E K + S
Sbjct: 303 LSAGFGFAEFDTISNAKNAIKTLTGSVVDGKLVEMKIATGNSEPRKHMTKLQHPKGALKS 362
Query: 679 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
N+ K + KI+V+N+ FQA + ++++LF +G +K +RLPK + HRGF FVEF++K
Sbjct: 363 NLEKPS-PKIIVKNLAFQATKRDLQKLFGFYGNVKSIRLPKTI--KNQHRGFAFVEFMSK 419
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDI 773
EA A++ L Q++HLYGR L+LE++ E VE +
Sbjct: 420 KEAIHAIEML-QNSHLYGRHLILEFSGETTGVEKL 453
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 128/315 (40%), Gaps = 22/315 (6%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGMAYIGFKDEKNCNKALNKNKS 280
R TI++KNLP + +L FK L + G+ I EK K KN +
Sbjct: 138 RSDDTIIIKNLPPSADEMELLEMFKKFGALLRFAVSPFGVMGIVQYMEKRAAKIAFKNLA 197
Query: 281 FWKGKQLNIY------KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI- 333
+ + + +Y K+ D+ + E + E+ + +D
Sbjct: 198 YKRYNTVPLYLEWAPVKFFHDDVEPRLPNPVVQQEVAAEAASHTQTMAPEEEEEEEDDFK 257
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDK--TKGFALVTFLMPEH 390
+ +++RNL++ T++ L K + G + I+ D + GF F +
Sbjct: 258 SLHASVYIRNLNFKTTDNGLRKFLKDLPGLITCKIIRKDGPDGNPLSAGFGFAEFDTISN 317
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
A A + L G+V G+++ + K GN + + H + A +E S +II
Sbjct: 318 AKNAIKTLTGSVVDGKLVEM-----KIATGNSEPRKHMTKLQHPKGALKSNLEKPSPKII 372
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVP-----PYGITGLVEFLQKNQAKAAFNSLAY 505
VKNL ++ DL+ LF +G++ + +P + VEF+ K +A A L
Sbjct: 373 -VKNLAFQATKRDLQKLFGFYGNVKSIRLPKTIKNQHRGFAFVEFMSKKEAIHAIEMLQN 431
Query: 506 TKFKEVPLYLEWAPE 520
+ L LE++ E
Sbjct: 432 SHLYGRHLILEFSGE 446
>gi|209882532|ref|XP_002142702.1| multiple RNA-binding domain-containing protein 1 [Cryptosporidium
muris RN66]
gi|209558308|gb|EEA08353.1| multiple RNA-binding domain-containing protein 1, putative
[Cryptosporidium muris RN66]
Length = 809
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 178/330 (53%), Gaps = 45/330 (13%)
Query: 445 RSKRIILVKNLP--YRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNS 502
RS I++K+LP Y T+ DL+ + P+G + R+ + P +V++L+ + A AF
Sbjct: 498 RSSDTIILKHLPSEYTTID-DLQKICSPYGSINRLCLSPSRTIAIVQYLEDSSATIAFKK 556
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
LA+ +FK PLYLEWAP +F + E+ N+ V
Sbjct: 557 LAFRRFKNAPLYLEWAPINIFLTNHD-------------------------TEDFNKPEV 591
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPG 622
P E E T ++IK LNF ++ED + + F T+ +K K
Sbjct: 592 PTTE----------LEDTTCIFIKGLNFKTSEDCLLKIFGNINGFRKSTIIKKTVNKDDN 641
Query: 623 QF-LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
Q LSMGYGF++F T E+ + +K +Q + +D+H I+L S R+ + + + N+
Sbjct: 642 QIKLSMGYGFLEFDTIENARECIKKMQGTVIDDHIIQLSMSKRDSKPKLNGIVNLDPNII 701
Query: 682 KQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
K+T +K+L++N+PFQA +++V+ LF A G + VR+PKK G +RG+ FVEF+ K
Sbjct: 702 KKTSKISNKLLIKNLPFQASKNDVKNLFGAIGSVVSVRIPKKY--DGTNRGYCFVEFLGK 759
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
EA A++ L Q +HLYGR L++E A+++D
Sbjct: 760 LEALAALEQL-QHSHLYGRHLIIELAKDSD 788
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 305 DDNNN----------ASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLT 354
DDNNN ++NI ++ + E+ + + ++ SGR+ V N Y+ +E+DL
Sbjct: 254 DDNNNKDEDKKLNDELDLDNIDEQNKMNIENKIDNGDSLS-SGRLMVLNFPYSTSEEDLI 312
Query: 355 KLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPG 413
+ F +G + + + T +KG V F PEHA +A ++F GR++ + P
Sbjct: 313 EYFSTWGEVKSTHIVKSERTGISKGCGFVQFAFPEHAVRALSESHMSLFQGRIIRVSPA 371
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 23/203 (11%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLF------EKYGPLAEVILPIDKETDKTKGFALVTF 385
++ ++ IF++ L++ +ED L K+F K + + + D + + G+ + F
Sbjct: 595 ELEDTTCIFIKGLNFKTSEDCLLKIFGNINGFRKSTIIKKTVNKDDNQIKLSMGYGFLEF 654
Query: 386 LMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEAR 445
E+A + + + GTV ++ L K ++++ ++G V+ LD +++
Sbjct: 655 DTIENARECIKKMQGTVIDDHIIQLSMSK-RDSKPKLNGIVN-------LDP--NIIKKT 704
Query: 446 SK--RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGITG----LVEFLQKNQAKA 498
SK +L+KNLP++ D+K LF G + V +P Y T VEFL K +A A
Sbjct: 705 SKISNKLLIKNLPFQASKNDVKNLFGAIGSVVSVRIPKKYDGTNRGYCFVEFLGKLEALA 764
Query: 499 AFNSLAYTKFKEVPLYLEWAPEG 521
A L ++ L +E A +
Sbjct: 765 ALEQLQHSHLYGRHLIIELAKDS 787
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 29 ITQEQLKAKFEE-KGTVTDVQL--KYTTEGK----FRRFAFIGYHREDQAQAALDYFNNT 81
+T+++L+ F T+TDV++ KY+ + K RRF F+G+ + A+ AL+YFN T
Sbjct: 39 LTEKRLREHFSSINCTITDVRIAKKYSKDPKKINLSRRFGFVGFLNTEDAKKALEYFNGT 98
Query: 82 YVFSSRIKVEKCSNLGDTTKPKSWSKYA 109
++ +SRI VE G + P S+Y+
Sbjct: 99 FINTSRITVEFALPPGSSDIPIPKSRYS 126
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 667 ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 726
E ++ K N + +++V N P+ + ++ E F +GE+K + K +G+
Sbjct: 276 EQNKMNIENKIDNGDSLSSGRLMVLNFPYSTSEEDLIEYFSTWGEVKSTHIVKSE-RTGI 334
Query: 727 HRGFGFVEFITKNEAKRAM 745
+G GFV+F A RA+
Sbjct: 335 SKGCGFVQFAFPEHAVRAL 353
>gi|449018190|dbj|BAM81592.1| probable RNA binding protein Mrd1p [Cyanidioschyzon merolae strain
10D]
Length = 815
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 178/332 (53%), Gaps = 45/332 (13%)
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAY 505
S+ I++KNLP RT DL +G LGR++V P G+ EFL +NQAKAAF LAY
Sbjct: 514 SRTTIILKNLPARTTSADLGPKLGRYGQLGRLVVAPGGLIAFAEFLDENQAKAAFRGLAY 573
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEV 565
T++ ++PLYLEWAP G++A + G++ E + A D+ E
Sbjct: 574 TRYADLPLYLEWAPRGIWA-----------DPTPPNGDDIAEASPKAYASVDDSGSGSE- 621
Query: 566 EENVEEDEEREPEPD---TTLYIKNLNFNSTEDSIRRHFKKCG--------PIASVTVAR 614
EP P+ T+L I+NL+ ++T + H + G P+ T +
Sbjct: 622 ----------EPPPNWSQTSLLIRNLSLDTTSGMLVEHLESLGVRPRIVRIPLDEETPS- 670
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
D +SP + Y F +F T + +AL +L S+L H++ S +++ S V
Sbjct: 671 -MDSRSPN--IPSKYAFAEFATCKEAWRALHILDGSALRGHRLSAAPSEKHVTSR---VA 724
Query: 675 RKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
+ V + G +K++++NI F+A + E+ +LF +FG +K +RLPKK+ GSG RGF F
Sbjct: 725 ASETAVVPEAGNETKLIIKNIAFEASKRELHQLFSSFGHVKSLRLPKKVDGSG--RGFCF 782
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
VE+ T E RA AL Q TH YGR+LV+E++
Sbjct: 783 VEYATPQETARAT-ALVQGTHFYGRKLVVEYS 813
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ S RIF+RNL + VT +DL KL E +G L +V L D+E+ +++GF F A
Sbjct: 308 LCRSSRIFIRNLGFNVTFEDLEKLLEPFGELEDVHLVRDRESGQSRGFGFARFKTVTSAQ 367
Query: 393 QAYQHLDGTVFLGRMLHLIP 412
QA LDG+V+ GR+LH++P
Sbjct: 368 QAMDALDGSVYQGRLLHIMP 387
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 25 FIYKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
F I++E+L+A F G VTDV++ T G+ R F F+GY +A AA +F+ T++
Sbjct: 63 FASYISEERLRAHFSRLGDVTDVRVSRTASGRSREFGFVGYRTPAEAAAAKAFFDQTFLD 122
Query: 85 SSRIKVE 91
+ RI VE
Sbjct: 123 TRRITVE 129
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+I +RN+ F ++E+L + FGEL+ V L + SG RGFGF F T A++AM
Sbjct: 312 SRIFIRNLGFNVTFEDLEKLLEPFGELEDVHLVRDR-ESGQSRGFGFARFKTVTSAQQAM 370
Query: 746 KALCQSTHLYGRRLVLEWAEEADNVE 771
AL S +Y RL+ EAD E
Sbjct: 371 DALDGS--VYQGRLLHIMPSEADRYE 394
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 110/272 (40%), Gaps = 35/272 (12%)
Query: 226 TIVVKNLPAGVKKKDLK---AYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFW 282
TI++KNLPA DL + L V L +A+ F DE N KA + ++
Sbjct: 517 TIILKNLPARTTSADLGPKLGRYGQLGRLVVAPGGL-IAFAEFLDE-NQAKAAFRGLAYT 574
Query: 283 KGKQLNIYKYSKDNSAKYSGAADDN--NNASMENIKAKHWKSQEDSVQFAEDIA---ESG 337
+ L +Y A AD N + K + S +DS +E+
Sbjct: 575 RYADLPLYL----EWAPRGIWADPTPPNGDDIAEASPKAYASVDDSGSGSEEPPPNWSQT 630
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVI-LPIDKETDKTKG--------FALVTFLMP 388
+ +RNLS T L + E G ++ +P+D+ET +A F
Sbjct: 631 SLLIRNLSLDTTSGMLVEHLESLGVRPRIVRIPLDEETPSMDSRSPNIPSKYAFAEFATC 690
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
+ A +A LDG+ G L P +E +V +V SE + V EA ++
Sbjct: 691 KEAWRALHILDGSALRGHRLSAAP-----SEKHVTSRV--AASETAV-----VPEAGNET 738
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVP 480
+++KN+ + +L LF FG + + +P
Sbjct: 739 KLIIKNIAFEASKRELHQLFSSFGHVKSLRLP 770
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQAYQ 396
++ ++N+++ ++ +L +LF +G + + LP K+ D + +GF V + P+ +A
Sbjct: 739 KLIIKNIAFEASKRELHQLFSSFGHVKSLRLP--KKVDGSGRGFCFVEYATPQETARATA 796
Query: 397 HLDGTVFLGRML 408
+ GT F GR L
Sbjct: 797 LVQGTHFYGRKL 808
>gi|340503643|gb|EGR30188.1| rbd protein, putative [Ichthyophthirius multifiliis]
Length = 379
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/323 (36%), Positives = 168/323 (52%), Gaps = 50/323 (15%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RSK IILVKNLP++ L LFE FG + R+L+ P G+V+F + A+ AF L+
Sbjct: 101 RSKNIILVKNLPFKIQEDGLSELFERFGFVTRLLISPNRSIGIVQFESEEHAQNAFEKLS 160
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y K PLYLEWAP G+ E
Sbjct: 161 YFSLKNCPLYLEWAPIGLLK-------------------------------------TEE 183
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK--CGPIASVTVARKKDPKSPG 622
VE++ + EE + E +YIKNL+F+ E ++ F+K G I +V + +K +
Sbjct: 184 VEKHQKIQEEIDDELARVVYIKNLDFSVQETELKEFFEKQNLGEIKAVKIIKKNNN---- 239
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS-NRNLESEATTVKRKSSNVA 681
S GYGFV++ ++ + +K LQNS + L S + + + ++K N
Sbjct: 240 ---SQGYGFVEYKNSSAVQECIKRLQNSLFQGRCLHLSVSKGKQQQEDNKGKQKKGKNNN 296
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+KI++RN+ F+ + EV EL K FGE+K VRLPKKM +G HRGF FVEF T EA
Sbjct: 297 IPISNKIVIRNLAFETDKKEVRELIKGFGEVKSVRLPKKM--NGQHRGFAFVEFTTTQEA 354
Query: 742 KRAMKALCQSTHLYGRRLVLEWA 764
K A AL ++TH YGR+LV+EWA
Sbjct: 355 KNAFTAL-ENTHFYGRKLVIEWA 376
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 37/307 (12%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS--VRTTFLGMAYIGFKDEKNCNKALNK 277
++R + I+VKNLP +++ L F+ + + + + + F+ E++ A K
Sbjct: 99 NERSKNIILVKNLPFKIQEDGLSELFERFGFVTRLLISPNRSIGIVQFESEEHAQNAFEK 158
Query: 278 NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG 337
+ +S N Y A + E KH K QE+ +++A
Sbjct: 159 -----------LSYFSLKNCPLYLEWAPIGLLKTEE--VEKHQKIQEE---IDDELARV- 201
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEV-ILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
++++NL ++V E +L + FEK L E+ + I K+ + ++G+ V + + +
Sbjct: 202 -VYIKNLDFSVQETELKEFFEKQN-LGEIKAVKIIKKNNNSQGYGFVEYKNSSAVQECIK 259
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
L ++F GR LHL K K+ + + GK + N++V ++NL
Sbjct: 260 RLQNSLFQGRCLHLSVSKGKQQQEDNKGKQK-KGKNNNIPISNKIV---------IRNLA 309
Query: 457 YRTLPTDLKALFEPFGDLGRVLVP-----PYGITGLVEFLQKNQAKAAFNSLAYTKFKEV 511
+ T +++ L + FG++ V +P + VEF +AK AF +L T F
Sbjct: 310 FETDKKEVRELIKGFGEVKSVRLPKKMNGQHRGFAFVEFTTTQEAKNAFTALENTHFYGR 369
Query: 512 PLYLEWA 518
L +EWA
Sbjct: 370 KLVIEWA 376
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 569 VEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
++ D + +KNL F ED + F++ G + + + SP +
Sbjct: 92 LDNDRRTNERSKNIILVKNLPFKIQEDGLSELFERFGFVTRLLI-------SPNR----S 140
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNL--ESEATTVKRKSSNVAKQTGS 686
G VQF + E A + L SL + L+ + L E ++ + +
Sbjct: 141 IGIVQFESEEHAQNAFEKLSYFSLKNCPLYLEWAPIGLLKTEEVEKHQKIQEEIDDELAR 200
Query: 687 KILVRNIPFQAKQSEVEELF--KAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ ++N+ F +++E++E F + GE+K V++ KK S +G+GFVE+ + +
Sbjct: 201 VVYIKNLDFSVQETELKEFFEKQNLGEIKAVKIIKKNNNS---QGYGFVEYKNSSAVQEC 257
Query: 745 MKALCQSTHLYGRRLVLEWAEEADNVED 772
+K L Q++ GR L L ++ ED
Sbjct: 258 IKRL-QNSLFQGRCLHLSVSKGKQQQED 284
>gi|320593340|gb|EFX05749.1| pre-rRNA processing protein [Grosmannia clavigera kw1407]
Length = 970
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 179/324 (55%), Gaps = 11/324 (3%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R R ILVKN Y T +++++FE FG + RVL+P G +V+F Q + A++ LA
Sbjct: 559 RGDRCILVKNFAYGTSSQEIRSMFEEFGPVVRVLMPTGGTIAIVQFAQAAHGRLAYSRLA 618
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y + + L LE PE +F ++ ++ E + + + K +E +Q
Sbjct: 619 YRRVNDTVLMLEKCPENLFGDSTHGQTLQDTEVGANDQKAKTKRPKVTASELLGEQ---- 674
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
VE +D ++L+++NLNF +T + + F S V K + K PG+
Sbjct: 675 VETEDVDDAADTEATTSSLFVRNLNFTTTTEQLAGAFSSLAGFVSARVNSKPNTKKPGET 734
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
LSMGYGFV+F T+ + A K + L H + ++ ++R + +A +R+S KQ
Sbjct: 735 LSMGYGFVEFRTKATAAAAGKAMDGFILHGHTLTVQAAHRG-QQDAAAERRESDRKRKQA 793
Query: 685 ---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
GSK++++N+PF+A +V L +G++K VRLP+K VG+G RG+ F EF+T +EA
Sbjct: 794 ANGGSKLIIKNLPFEATPKDVRTLLSTYGQVKAVRLPRK-VGNGT-RGYAFAEFLTASEA 851
Query: 742 KRAMKALCQSTHLYGRRLVLEWAE 765
AM AL + THL GRRLVL++AE
Sbjct: 852 AHAMDAL-RDTHLLGRRLVLQYAE 874
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
+ I E+ R+F+RNL Y TE + K FE +GP+ EV LP+ KGFA+V F
Sbjct: 370 DQIRETSRLFIRNLPYDATEAHIWKYFETFGPVKEVNLPV-TNAGANKGFAMVLFATAAS 428
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNV 422
A A+Q+ DG F GR+LH++P K K++ +V
Sbjct: 429 ALAAFQNGDGKTFQGRILHVLPAKAKKSATDV 460
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT+E L+ F G +TDV+L RR AF+GY ++A++A+ YFN +Y+ S+
Sbjct: 34 ITEESLRKHFSSGGRHITDVKLITR-----RRIAFLGYRTAEEAKSAVRYFNRSYIRMSK 88
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTF 147
+ VE +GD + P + S P Y+ A + K SK K + DP
Sbjct: 89 LFVEVAKPIGDLSLPGASSLKRP----YEG-QEAAQEDPQKVAEEDQSKRRKLDEADPKL 143
Query: 148 SDFLQL----HGKDVS 159
+FL++ HG+ +S
Sbjct: 144 REFLEVMKPQHGRGIS 159
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 101/254 (39%), Gaps = 38/254 (14%)
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TK 378
ED A+ A + +FVRNL++T T + L F + T K +
Sbjct: 678 EDVDDAADTEATTSSLFVRNLNFTTTTEQLAGAFSSLAGFVSARVNSKPNTKKPGETLSM 737
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAF 438
G+ V F A A + +DG + G L + + G D S+RK
Sbjct: 738 GYGFVEFRTKATAAAAGKAMDGFILHGHTLTVQAA----HRGQQDAAAERRESDRKR--- 790
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP---PYGITG--LVEFLQK 493
Q SK +++KNLP+ P D++ L +G + V +P G G EFL
Sbjct: 791 KQAANGGSK--LIIKNLPFEATPKDVRTLLSTYGQVKAVRLPRKVGNGTRGYAFAEFLTA 848
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWA------PEGVFAEAKEK-------------SKGKE 534
++A A ++L T L L++A PE A+ ++K + G+
Sbjct: 849 SEAAHAMDALRDTHLLGRRLVLQYAEAEALDPEEELAKMRKKVGSQMNTVALQQLTTGRR 908
Query: 535 KEKNEEEGEEGEEE 548
+ GEEG EE
Sbjct: 909 QRTKVHIGEEGAEE 922
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
S++ +RN+P+ A ++ + + F+ FG +K V LP + +G ++GF V
Sbjct: 376 SRLFIRNLPYDATEAHIWKYFETFGPVKEVNLP--VTNAGANKGFAMV 421
>gi|171695432|ref|XP_001912640.1| hypothetical protein [Podospora anserina S mat+]
gi|170947958|emb|CAP60122.1| unnamed protein product [Podospora anserina S mat+]
Length = 901
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 184/335 (54%), Gaps = 41/335 (12%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
++AF + R ILVKN+ T+ +++ LFE G + RVL+P G +V+F Q
Sbjct: 463 IEAFKS--QQRGDTSILVKNIKNATI-EEIRTLFEEHGSVLRVLMPTSGTIAIVQFAQPA 519
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+AAF AY++FK+ LYLE P+G+F + N A
Sbjct: 520 HCRAAFAKKAYSRFKDGVLYLEKGPKGLFVD--------------------------NLA 553
Query: 555 E-EDNQQGVPEVEEN-VEEDEEREPEPDT-TLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
+ D GV +V + + E ++ E +P+T +L+++NLNF++T + + FK S
Sbjct: 554 QPADRPAGVQKVSASYLLERDDGEDQPETASLFVRNLNFSTTTEGLTNAFKPLDGFVSAQ 613
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
V K DPK PGQ LSMG+GF F T+E A K + LD H++ +K S+R L++
Sbjct: 614 VKTKTDPKKPGQVLSMGFGFCAFRTKEQAQAARKAMDGHVLDGHKLLVKASHRGLDAAE- 672
Query: 672 TVKRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 728
+R+ ++AK+ +K++++N+PF+A + +V LF +G+L +R+PKK S R
Sbjct: 673 --ERRREDLAKKANAQRTKVVIKNLPFEASKKDVRALFSNYGKLVALRIPKKFNHSS--R 728
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
GF F EF T EA A+ AL + TH GRRLVL++
Sbjct: 729 GFAFAEFSTGKEALNAITAL-KDTHFLGRRLVLDF 762
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 165/419 (39%), Gaps = 94/419 (22%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
I++ + F +G VTDV+L RR F+GY + A A+ YFN +++
Sbjct: 15 ISEADFRKHFSLQGREVTDVKLIPN-----RRIGFVGYKSHEDAIKAVKYFNKSFI---- 65
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKND--- 144
P+S ++ A S + K D +P ++D KK K D
Sbjct: 66 -----------PAIPRSATQAAHVPSRDAAKASSLVKSDAEP--SEDDPSSKKRKRDVVD 112
Query: 145 ---PTFSDFLQLHGKDVSKLLPLSNKDGEEK-----EEENEDESNNQIAHADISDMEYLK 196
P +FL++ G K KDGE E E D + + SD EY
Sbjct: 113 EADPKLQEFLEVMGHPTKK-----AKDGEALGSGAFESEAADAIPSALIEGGESDDEYED 167
Query: 197 LKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTT 256
+ + K P+ +AP T V +P + A + +P S T
Sbjct: 168 IPVRPKR---------PIEEAPTSALPVATPVAAIIPPAPSQPAGDAA-REVPQVSAEAT 217
Query: 257 FLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDN-SAKYSGAADDNNNASMENI 315
D+ N+ L++ A+ +GA +
Sbjct: 218 ----------DDDWLRSRTNR--------LLDLVDPDDPGFPAQSAGAMPATTQTPLP-- 257
Query: 316 KAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL------- 368
+A+ ++QE + A S R+F+RNLSYTVTED++ F ++G L E ++
Sbjct: 258 EAQVQETQEPGLA-----AGSARLFLRNLSYTVTEDNVRDHFSQFGELEEHMMRTWARYF 312
Query: 369 ----------PIDKETDKT-KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
PI + KGFA++ + PE A A+Q DGTVF GR++H++P K
Sbjct: 313 SRCFEILKKGPIVVLLFRLYKGFAMIRYASPEAALSAFQ-TDGTVFQGRIIHILPAAAK 370
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 36/234 (15%)
Query: 260 MAYIGFKDEKNCNKALNKNK-SFWKGKQLNIYKYSK----DNSAKYSGAADDNNNASMEN 314
+A + F +C A K S +K L + K K DN A+ + + A ++
Sbjct: 510 IAIVQFAQPAHCRAAFAKKAYSRFKDGVLYLEKGPKGLFVDNLAQPA-----DRPAGVQK 564
Query: 315 IKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL-AEVILPIDKE 373
+ A + ++D ED E+ +FVRNL+++ T + LT F+ PL V + +
Sbjct: 565 VSASYLLERDD----GEDQPETASLFVRNLNFSTTTEGLTNAFK---PLDGFVSAQVKTK 617
Query: 374 TDKTK-------GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKV 426
TD K GF F E A A + +DG V G L + K + +D
Sbjct: 618 TDPKKPGQVLSMGFGFCAFRTKEQAQAARKAMDGHVLDGHKLLV-----KASHRGLDAA- 671
Query: 427 HCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP 480
ER+ + + A+ +++ +KNLP+ D++ALF +G L + +P
Sbjct: 672 ----EERRREDLAKKANAQRTKVV-IKNLPFEASKKDVRALFSNYGKLVALRIP 720
>gi|340382973|ref|XP_003389992.1| PREDICTED: probable RNA-binding protein 19-like [Amphimedon
queenslandica]
Length = 660
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 137/439 (31%), Positives = 216/439 (49%), Gaps = 59/439 (13%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
K T ++LK F + G +TDV+L YT G FRRFAF+GY AQ ++ YFNNTY+ +S+
Sbjct: 38 KATSKELKEHFSKCGQITDVKLMYTRSGTFRRFAFVGYSDSFSAQESIKYFNNTYIGTSK 97
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSA---YQKLHNIAPKQDLKPEHTKDSKPGKKSK-- 142
I+V + + GD++ P+ WSKY+ SS Y+K + E K+ + G+KSK
Sbjct: 98 IQVIEAKSFGDSSIPRPWSKYSTGSSTNQIYEKKRKSTKDSSIDEEEQKEKEEGRKSKRL 157
Query: 143 ----------------------NDPTFSDFLQLHGKDVSKLLPLSNKDGEEKE------- 173
++P F +FL + + S + G +
Sbjct: 158 KLNEDFHQSQLVSLVNELEELKSEPGFMEFLAANERGCSSETWSNEGKGSSENDKKKKKR 217
Query: 174 ---EENEDESNNQI-AHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVV 229
E NEDE NN + +SD+E+LK +K + + + HTI +
Sbjct: 218 KEVELNEDEDNNLARVPSSVSDLEFLK--SKVVEHVTDETREEEREEESEPSPPLHTIRM 275
Query: 230 KNLPAGVKKKDLKAYFKPLPLASVRTT------FLGMAYIGFKDEKNCNKALNKNKSFWK 283
+ LP +K + +F P+ L+++R G+A++ + + +A+ +NK
Sbjct: 276 RGLPYDASEKHVHKFFSPIQLSNIRLLKDDRERCSGLAFVDVMSKTDLKEAMKRNKGRMG 335
Query: 284 GKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRN 343
+ + + D + K+K +++ + E IA+SG+IF+RN
Sbjct: 336 RRYIEL-------------VVDTGSKEKTVKEKSKRPWEEKEDEETVESIADSGQIFIRN 382
Query: 344 LSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVF 403
L YT TE++LT+LFE+YG L+E+ L +DK T G VTF+ PEHA +A+ LDG VF
Sbjct: 383 LPYTTTEEELTELFEEYGQLSEINLLVDKSTGSFIGLGYVTFMFPEHAVKAFSELDGQVF 442
Query: 404 LGRMLHLIPGKPKENEGNV 422
GR+LHL+P KP E V
Sbjct: 443 QGRLLHLLPSKPPNKEVGV 461
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
Query: 434 KLDAF----NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVE 489
KL+ F N+V RSK ++LVKNLP+ T +L LF PFG L V++PP GI+ LVE
Sbjct: 551 KLNLFDTDENEVTRKRSKNVVLVKNLPFGTSTKELTELFGPFGSLSCVILPPAGISALVE 610
Query: 490 FLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFA 524
+ N AK AF L+Y +FK +PLYLEWA GV +
Sbjct: 611 YSSSN-AKVAFKKLSYCEFKHLPLYLEWASFGVMS 644
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 23/115 (20%)
Query: 652 LDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGE 711
L+ H ++L + + E+E T +++S NV +LV+N+PF E+ ELF FG
Sbjct: 545 LESHGVKLNLFDTD-ENEVT--RKRSKNV-------VLVKNLPFGTSTKELTELFGPFGS 594
Query: 712 LKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL--CQSTHLYGRRLVLEWA 764
L V LP + + VE+ + N AK A K L C+ HL L LEWA
Sbjct: 595 LSCVILPPAGISA-------LVEYSSSN-AKVAFKKLSYCEFKHL---PLYLEWA 638
>gi|452983642|gb|EME83400.1| hypothetical protein MYCFIDRAFT_164576, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 833
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 178/334 (53%), Gaps = 36/334 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F + R IL KN+PY +LK LFE GD+ R L+PP G +VE+
Sbjct: 484 LDSFKK--SQRGDTAILAKNIPYDFSRDELKRLFEEQGDVKRFLMPPSGTIAIVEYANAA 541
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
Q + AF +LAY + K L+LE AP+ +F G+ E++
Sbjct: 542 QCQTAFGALAYRRVKSSVLFLEKAPKNLFT-----------------GKPAPPVAAEHSV 584
Query: 555 EEDNQQGVPEVEE-NVEEDEEREPEPDT----TLYIKNLNFNSTEDSIRRHFKKCGPIAS 609
E +V E NV PDT TL+++NLNF +T + F S
Sbjct: 585 EAKASSSDLKVAELNV---------PDTAGPATLFVRNLNFTTTTKLLTDTFNTLDGFLS 635
Query: 610 VTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESE 669
V K DPK PGQ LSMG+GF++F + + AL+ + +L+ H+++++ S++ ++
Sbjct: 636 ARVKTKTDPKKPGQVLSMGFGFLEFRSAKQAQAALQAMDGYTLEGHKLQIRASHKGADAA 695
Query: 670 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 729
K + A +K++++N+PF+A + +V L A+G+L+ VR+PKKM + RG
Sbjct: 696 EERRKADAEKKAASAKTKLVIKNLPFEASKKDVRALLGAYGQLRSVRVPKKMDRAA--RG 753
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
FGF EF T EA+ AM+AL + THL GRRLV+++
Sbjct: 754 FGFAEFTTIKEAQSAMEAL-RDTHLLGRRLVIDF 786
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 160/387 (41%), Gaps = 69/387 (17%)
Query: 58 RRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQK 117
RR ++GY + AQ A+ YFN T++ SRI VE + D + K+ + A ++ Q
Sbjct: 40 RRIGYVGYKTPEDAQKAVKYFNKTFIRMSRIGVELARPVDDQVQAKA--RTAAQTATPQP 97
Query: 118 LHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENE 177
++ +LK + ++K + ++DP +FL + P S K E E
Sbjct: 98 SKDVG-SAELKRKSVSETK---EKESDPKLKEFLDAYK-------PKSKKREWEAEAAQV 146
Query: 178 DESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVK 237
D SN+ A D + + L + D A D +Y N+P K
Sbjct: 147 D-SNSHSAEGQAIDSQSMAL-VDAHDGASDD--------------EYE-----NVPKKTK 185
Query: 238 KKDLKAYF--KPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKD 295
+ L++ P + T + + GF +E + + + ++ + +
Sbjct: 186 RAKLESETPTAAAPEVTSVTPNVSDDWEGFDNEADAEERIETEAQ----APVSDMDWIRS 241
Query: 296 NSAKYSGAADD---NNNASMENIKAKHWKSQEDSVQFAED-------------------- 332
+++ G DD +NA+ K S D V ED
Sbjct: 242 KTSRTLGLLDDEEEQDNAARATPKDDIVASTPDPVPVPEDEPISVIPTPPAKDDGSQPPV 301
Query: 333 ------IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
+ + R+FVRNL Y V DDL FE +G L EV +P+DK++ KGFA + +
Sbjct: 302 DKDIESVRTTMRLFVRNLPYDVQRDDLEAEFEPFGNLEEVHIPLDKKSGSAKGFAYIQYS 361
Query: 387 MPEHATQAYQHLDGTVFLGRMLHLIPG 413
P+ A +A DG F GR++H+IP
Sbjct: 362 DPDSAERALVDRDGQTFQGRLIHIIPA 388
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP--KKMVGSGLHRGFGFVEFITKNE 740
+T ++ VRN+P+ ++ ++E F+ FG L+ V +P KK SG +GF ++++ +
Sbjct: 309 RTTMRLFVRNLPYDVQRDDLEAEFEPFGNLEEVHIPLDKK---SGSAKGFAYIQYSDPDS 365
Query: 741 AKRAM 745
A+RA+
Sbjct: 366 AERAL 370
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFL 386
D A +FVRNL++T T LT F + + K + GF + F
Sbjct: 602 DTAGPATLFVRNLNFTTTTKLLTDTFNTLDGFLSARVKTKTDPKKPGQVLSMGFGFLEFR 661
Query: 387 MPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARS 446
+ A A Q +DG G L + + + D RK DA + A++
Sbjct: 662 SAKQAQAALQAMDGYTLEGHKLQI-----RASHKGAD----AAEERRKADAEKKAASAKT 712
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAF 500
K +++KNLP+ D++AL +G L V VP G G EF +A++A
Sbjct: 713 K--LVIKNLPFEASKKDVRALLGAYGQLRSVRVPKKMDRAARGF-GFAEFTTIKEAQSAM 769
Query: 501 NSLAYT 506
+L T
Sbjct: 770 EALRDT 775
>gi|378731298|gb|EHY57757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 763
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 173/337 (51%), Gaps = 45/337 (13%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
+DAF +R R IL+KN + T +L + +GDL R++ P G+ + ++
Sbjct: 418 IDAFKN--RSRDDRTILLKNFSFGTTSEELSQMLNQYGDLERLVFPTTGVMAVAQYRDPA 475
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
A A LAY + LYLE APEG++ E+ A
Sbjct: 476 AASLALKQLAYRNLRGSVLYLEKAPEGLW---------------------------EHAA 508
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDT-TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
G + V ED E + T T++++NLNF++T + FK S V
Sbjct: 509 PLPADLGTQT--QQVPEDAESKTLGSTFTVFVRNLNFSTTTARLSEAFKPLSGFLSARVK 566
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQ--IELKRSNRNLESEAT 671
+ D K PG+ LSMG+GFV+F TR A+ + LD H+ ++L + +L E
Sbjct: 567 TRTDAKRPGEILSMGFGFVEFRTRAQAEAAIATMNGRRLDGHELLVQLSQKVTDLAEE-- 624
Query: 672 TVKRKSSNVAKQTGS---KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 728
R+ ++AK+ S KI+++N+PF+A + ++ LF A+G+L+ VRLPKK S R
Sbjct: 625 ---RRKEDIAKKLDSNKTKIVIKNLPFEATKKDIRALFGAYGQLRTVRLPKKFDNSA--R 679
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE 765
GF F EF+T EA+ AM+AL +THL GRRLVL++AE
Sbjct: 680 GFAFAEFVTPKEAENAMEALS-NTHLLGRRLVLDFAE 715
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
R+F+RNL + E DL K F +G ++EV + D KG A V F+ P A +A
Sbjct: 246 ARLFIRNLPFDAKEGDLRKTFAPFGRVSEVHIVTDTRKLTGKGLAYVQFVEPADAEKALL 305
Query: 397 HLDGTVFLGRMLHLIPGKPK 416
LDG F GR++H++P K
Sbjct: 306 ELDGRDFQGRLMHILPASEK 325
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP---LASVRTTF----------LGMAYIGFKDEKNCN 272
T+ V+NL L FKPL A V+T +G ++ F+
Sbjct: 535 TVFVRNLNFSTTTARLSEAFKPLSGFLSARVKTRTDAKRPGEILSMGFGFVEFRTRAQAE 594
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
A+ + G++L+ ++ S K + A++ E+I AK S +
Sbjct: 595 AAI----ATMNGRRLDGHELLVQLSQKVTDLAEERRK---EDI-AKKLDSNKT------- 639
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+I ++NL + T+ D+ LF YG L V LP K + +GFA F+ P+ A
Sbjct: 640 -----KIVIKNLPFEATKKDIRALFGAYGQLRTVRLP-KKFDNSARGFAFAEFVTPKEAE 693
Query: 393 QAYQHLDGTVFLGRMLHL 410
A + L T LGR L L
Sbjct: 694 NAMEALSNTHLLGRRLVL 711
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 128/322 (39%), Gaps = 63/322 (19%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T++QL++ F +K VTD + RR F+G+ + A++A +YFN T++ S+I
Sbjct: 24 LTKDQLRSHFADKYPVTDAHVIPD-----RRIGFVGFTTHENAKSAANYFNKTFIRMSKI 78
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHN-----IAPKQDLKPEHT--KDSKPGKKS 141
V + P + S K N ++ K+ + H ++ +P S
Sbjct: 79 SVTLAKPVEVRRDPSGQAAPVSQRSLRHKERNQDGAELSSKKRKRDIHDTGENDQPTASS 138
Query: 142 KN-------------------------------DPTFSDFLQLHGKDVSKLLPLSNKDGE 170
N D SD L GK S+LL L ++G+
Sbjct: 139 TNIKLDAHGQHQEGVNPSDHVMTSENNTMDVAEDAPRSDTDWLRGK-TSRLLDLVEQEGQ 197
Query: 171 EKEE--ENEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIV 228
+ +N +N + H + D S+D A SD S A V +
Sbjct: 198 DSHTALDNAPVTNETVPHV-VEDA------AGSEDKANSDAEARTGSTATVSIPNAR-LF 249
Query: 229 VKNLPAGVKKKDLKAYFKPLPLAS--------VRTTFLGMAYIGFKDEKNCNKALNK-NK 279
++NLP K+ DL+ F P S + T G+AY+ F + + KAL + +
Sbjct: 250 IRNLPFDAKEGDLRKTFAPFGRVSEVHIVTDTRKLTGKGLAYVQFVEPADAEKALLELDG 309
Query: 280 SFWKGKQLNIYKYSKDNSAKYS 301
++G+ ++I S+ K S
Sbjct: 310 RDFQGRLMHILPASEKKVQKLS 331
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILP-IDKETDKTK-------GFALVTFLMPEH 390
+FVRNL+++ T +L E + PL+ + + TD + GF V F
Sbjct: 536 VFVRNLNFSTTT---ARLSEAFKPLSGFLSARVKTRTDAKRPGEILSMGFGFVEFRTRAQ 592
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
A A ++G G L + + KV ER+ + + +++ +I+
Sbjct: 593 AEAAIATMNGRRLDGHELLV----------QLSQKVTDLAEERRKEDIAKKLDSNKTKIV 642
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLA 504
+KNLP+ D++ALF +G L V +P G EF+ +A+ A +L+
Sbjct: 643 -IKNLPFEATKKDIRALFGAYGQLRTVRLPKKFDNSARGF-AFAEFVTPKEAENAMEALS 700
Query: 505 YTKFKEVPLYLEWA 518
T L L++A
Sbjct: 701 NTHLLGRRLVLDFA 714
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 16/95 (16%)
Query: 666 LESEATTVKRKSSNVAKQTGS---------KILVRNIPFQAKQSEVEELFKAFG---ELK 713
+E A + + +S+ +TGS ++ +RN+PF AK+ ++ + F FG E+
Sbjct: 217 VEDAAGSEDKANSDAEARTGSTATVSIPNARLFIRNLPFDAKEGDLRKTFAPFGRVSEVH 276
Query: 714 FVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
V +K+ G GL +V+F+ +A++A+ L
Sbjct: 277 IVTDTRKLTGKGL----AYVQFVEPADAEKALLEL 307
>gi|118375162|ref|XP_001020766.1| probable RNA-binding protein [Tetrahymena thermophila]
gi|89302533|gb|EAS00521.1| probable RNA-binding protein [Tetrahymena thermophila SB210]
Length = 718
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 172/322 (53%), Gaps = 50/322 (15%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS ILVKN+ + K LF +G + + L+ P G+V+F ++ A AF L+
Sbjct: 442 RSNNTILVKNISSKVEQDSFKDLFSRYGYVSKFLLAPNKAIGVVQFEDQSHALNAFEKLS 501
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y K PLYLEWAP G+ V +
Sbjct: 502 YFSVKNNPLYLEWAPLGMI-------------------------------------DVEQ 524
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC--GPIASVTVARKKDPKSPG 622
EE E++ E E E LYIKNL+FN+TE +++ F+K G I SV + + K G
Sbjct: 525 AEEEKEKEIEIEDELSKILYIKNLSFNTTESTLQSLFEKAKVGTIRSVKIVKNK-----G 579
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK 682
Q S GYGFV+F E++ +++K LQNS LD H I+L S + +++ +RK V
Sbjct: 580 Q--SQGYGFVEFSDHEAVIKSIKKLQNSLLDGHSIQLSVSKK-EKNDPKKKERKQKQVDI 636
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+K+++RN+ F+ + EV +L K +GE+K VRLPKKM +G HRGF F EF + EAK
Sbjct: 637 PISTKLVIRNLAFECTKKEVRDLLKVYGEVKSVRLPKKM--NGQHRGFAFAEFSSAEEAK 694
Query: 743 RAMKALCQSTHLYGRRLVLEWA 764
A AL ++THLYGR+L +EWA
Sbjct: 695 NAFTAL-ENTHLYGRKLAIEWA 715
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
Query: 298 AKYSGAADDNNNASM----ENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDL 353
+K S ++N+N + EN + Q++S + + + R++V NL Y +TE+++
Sbjct: 207 SKKSKGNNENDNTNQDEQEENQEVSQDAKQKNSSSNNDPMIDDCRLYVLNLPYDITEEEV 266
Query: 354 TKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPG 413
+F KYG L E+ +P K + +GFA +T+ M A +A+ LD + GR+LH+ P
Sbjct: 267 KDVFRKYGKLLEIKMPKGK-GGQFRGFAYITYSMAGEAMRAFAELDNKIQFGRILHIRPA 325
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++LK F + G+VTD ++ + K RRF FIGY E A A +YFNNTY+ ++I
Sbjct: 14 VDEKKLKEIFSKFGSVTDAKVCLKGQ-KHRRFCFIGYKSEADATKAKEYFNNTYIQMNKI 72
Query: 89 KVE 91
+V+
Sbjct: 73 QVD 75
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 649 NSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKA 708
N++ DE + N+ + +A S+N ++ V N+P+ + EV+++F+
Sbjct: 218 NTNQDEQE-----ENQEVSQDAKQKNSSSNNDPMIDDCRLYVLNLPYDITEEEVKDVFRK 272
Query: 709 FGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
+G+L +++PK G RGF ++ + EA RA L +GR L
Sbjct: 273 YGKLLEIKMPKG--KGGQFRGFAYITYSMAGEAMRAFAELDNKIQ-FGRIL 320
>gi|323449244|gb|EGB05134.1| hypothetical protein AURANDRAFT_1296 [Aureococcus anophagefferens]
Length = 464
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 170/330 (51%), Gaps = 51/330 (15%)
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFN 501
+ARS+R +LVKNLP +L+ +F P G + VL+ P T +VEF + ++A+AAF
Sbjct: 186 ADARSRRSVLVKNLPADASAAELRKMFAPHGVVHDVLLAPSRTTAVVEFEEPSEARAAFK 245
Query: 502 SLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQG 561
LAY +F+ VPLYL WAPE K + A
Sbjct: 246 KLAYRRFRHVPLYLGWAPE-----------------------------KSDAAPAAPSST 276
Query: 562 VPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
VP+ +++E E T+++KNLNF +T ++R HF G A P +
Sbjct: 277 VPDAAAADDDEEVHE---GATVFVKNLNFKTTAAALRAHFSAFGVRACSL------PAAD 327
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
G+ + GYGF++F + A+ + LD H + L+ S R + ++ +
Sbjct: 328 GERNNRGYGFLEFDGADDARAAIATTR--PLDGHALGLELSKRKIA--------RAPDAK 377
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
K + +K++VRN+ F ++V++LF+AFG LK VRLPK+ G HRGF FVEF +A
Sbjct: 378 KTSKTKLVVRNLAFAVVVNDVKQLFEAFGALKKVRLPKRF--DGRHRGFAFVEFTNPRDA 435
Query: 742 KRAMKALCQSTHLYGRRLVLEWAEEADNVE 771
A +L +S HLYGR LV++WA+ VE
Sbjct: 436 AAARSSL-KSAHLYGRHLVIDWADPDPAVE 464
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
R++V NL Y +E+++ F +G ++EV P+ KET GFA VTF++P A A
Sbjct: 14 ARLYVANLPYDASEEEILAYFSPHGTVSEVHQPLSKETRAPLGFAFVTFVLPTAAEAATA 73
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERK 434
LDG F GR L + + K+ + + D + SER+
Sbjct: 74 SLDGASFRGRALSVAAAE-KQRKSSADDRAPRTFSERR 110
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 126/311 (40%), Gaps = 56/311 (18%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKP------LPLASVRTTFLGMAYIGFKDEKNCNKAL 275
R +++VKNLPA +L+ F P + LA RTT A + F++ A
Sbjct: 189 RSRRSVLVKNLPADASAAELRKMFAPHGVVHDVLLAPSRTT----AVVEFEEPSEARAAF 244
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
K ++ + + + +Y G A + ++A+ + + E++ E
Sbjct: 245 -KKLAYRRFRHVPLYL----------GWAPEKSDAAPAAPSST--VPDAAAADDDEEVHE 291
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+FV+NL++ T L F +G A + D E + +G+ + F + A A
Sbjct: 292 GATVFVKNLNFKTTAAALRAHFSAFGVRACSLPAADGERN-NRGYGFLEFDGADDARAAI 350
Query: 396 ---QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+ LDG LG L S+RK+ A + SK ++V
Sbjct: 351 ATTRPLDGHA-LGLEL----------------------SKRKI-ARAPDAKKTSKTKLVV 386
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPP-----YGITGLVEFLQKNQAKAAFNSLAYTK 507
+NL + + D+K LFE FG L +V +P + VEF A AA +SL
Sbjct: 387 RNLAFAVVVNDVKQLFEAFGALKKVRLPKRFDGRHRGFAFVEFTNPRDAAAARSSLKSAH 446
Query: 508 FKEVPLYLEWA 518
L ++WA
Sbjct: 447 LYGRHLVIDWA 457
>gi|429329749|gb|AFZ81508.1| hypothetical protein BEWA_009200 [Babesia equi]
Length = 687
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 176/333 (52%), Gaps = 36/333 (10%)
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
RS I++KNLP T+ +L +F FG L R + P+ + G+ +F A AF +L
Sbjct: 384 CRSDDTIIIKNLPPNTVEIELLEMFRQFGKLIRFSLSPFMVMGIAQFYDSKSANTAFKNL 443
Query: 504 AYTKFKEVPLYLEWAPEGVF-AEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
AY + +PLYLEWAP G+F +A ++ + EE E K
Sbjct: 444 AYKSYLSLPLYLEWAPIGMFHPDATIDDSLLNVTISDSKPEESSEPK------------- 490
Query: 563 PEVEENVEEDEEREPEPD-----TTLYIKNLNFNSTEDSIRRHFKKC-GPIASVTVARKK 616
E+ E V ++E+R+ P+ T++Y+KNL+F + ++ + HF G I+S V R
Sbjct: 491 -EIPEAVVQEEQRKDTPEESILHTSVYLKNLDFKTRDEDLHSHFSSYPGYISSKVVIRDG 549
Query: 617 DPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK 676
LSMG+GF++F + E A+ + +E+ S + + K+
Sbjct: 550 --------LSMGFGFIEFDSLEHAKAAIMKASGKLICGRLLEMSISKQEKKEVVKLKKQ- 600
Query: 677 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
V +KI+V+N+ FQA +SE+ +LF +G +K VR+PK + HRGF FV+F+
Sbjct: 601 ---VIATASTKIIVKNLAFQATKSEIHKLFSFYGNIKSVRIPKSV--KNQHRGFAFVDFM 655
Query: 737 TKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN 769
TK EA AM+AL Q +H YGR LVLE+AE+ ++
Sbjct: 656 TKQEAIHAMEAL-QHSHFYGRHLVLEFAEQEED 687
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 131/320 (40%), Gaps = 45/320 (14%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPLP--LASVRTTFLGMAYIGFKDEKNCNKALNKNK 279
R TI++KNLP + +L F+ + + F+ M F D K+ N A KN
Sbjct: 385 RSDDTIIIKNLPPNTVEIELLEMFRQFGKLIRFSLSPFMVMGIAQFYDSKSANTAF-KNL 443
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDS---------VQ-- 328
++ L +Y + A D+ S+ N+ K +E S VQ
Sbjct: 444 AYKSYLSLPLYLEWAPIGMFHPDATIDD---SLLNVTISDSKPEESSEPKEIPEAVVQEE 500
Query: 329 ----FAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDKTKGFALV 383
E+ ++++NL + ++DL F Y G ++ ++ D + GF +
Sbjct: 501 QRKDTPEESILHTSVYLKNLDFKTRDEDLHSHFSSYPGYISSKVVIRD---GLSMGFGFI 557
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVE 443
F EHA A G + GR+L + K + + + QV+
Sbjct: 558 EFDSLEHAKAAIMKASGKLICGRLLEMSISKQE--------------KKEVVKLKKQVIA 603
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-----PYGITGLVEFLQKNQAKA 498
S +II VKNL ++ +++ LF +G++ V +P + V+F+ K +A
Sbjct: 604 TASTKII-VKNLAFQATKSEIHKLFSFYGNIKSVRIPKSVKNQHRGFAFVDFMTKQEAIH 662
Query: 499 AFNSLAYTKFKEVPLYLEWA 518
A +L ++ F L LE+A
Sbjct: 663 AMEALQHSHFYGRHLVLEFA 682
>gi|389586278|dbj|GAB69007.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1121
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 191/340 (56%), Gaps = 17/340 (5%)
Query: 439 NQVVE-ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAK 497
N VV+ RS I+VKNL +T ++ +LF+ +G L +V PY +++F + AK
Sbjct: 723 NHVVKYKRSDDTIIVKNLSIQTNQKEVISLFKKYGVLSKVSFSPYNNIAILQFEKAENAK 782
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEED 557
AF S +Y ++K++PLYLEWAP +F ++ K + G GE KE + +
Sbjct: 783 KAFISNSYIRYKKLPLYLEWAPMNLFERKGDQDGVGSDSKGKTNG--GEIPAKEAVKKSE 840
Query: 558 NQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK------CGPIASVT 611
++ + + + E + E ++YIKNLNFN+ E+ +++ F+K C + S
Sbjct: 841 HEAAPKKEQHHSESESSDEEITHASIYIKNLNFNTKEEDLKKLFEKLEGFITCNIVKSKK 900
Query: 612 VARKKD----PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS-NRNL 666
KK+ ++ + +S GYGFV+F ++E +A+K L ++LD H +EL S NR
Sbjct: 901 AISKKNQEKGKETEQKLMSQGYGFVEFKSKELAVEAIKKLTATTLDGHVLELSLSRNRVK 960
Query: 667 ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 726
+ + K K+ K+LV+N+ FQ + E+ +LF AFG +K VR+PK
Sbjct: 961 KKNNKNNEEKEVVKEKKITKKLLVKNLAFQVTKEELRKLFSAFGNIKSVRIPKNAYNRS- 1019
Query: 727 HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
RG+ FVEF++KNE A+++L Q THLYGR L++++A++
Sbjct: 1020 -RGYAFVEFMSKNECLTAIESL-QHTHLYGRHLIIDFADD 1057
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 166/393 (42%), Gaps = 60/393 (15%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---GMAYIGFKDEKNCNKALN 276
+KR TI+VKNL +K++ + FK + S + +F +A + F+ +N KA
Sbjct: 728 YKRSDDTIIVKNLSIQTNQKEVISLFKKYGVLS-KVSFSPYNNIAILQFEKAENAKKAFI 786
Query: 277 KNKSFWKGKQL---------NIYKYSKDNSAKYSGAADDNNNASM---ENIKAKHWKSQE 324
N S+ + K+L N+++ D S + N + E +K ++
Sbjct: 787 SN-SYIRYKKLPLYLEWAPMNLFERKGDQDGVGSDSKGKTNGGEIPAKEAVKKSEHEAAP 845
Query: 325 DSVQFAEDIAES------GRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDK- 376
Q + S I+++NL++ E+DL KLFEK G + I+ K K
Sbjct: 846 KKEQHHSESESSDEEITHASIYIKNLNFNTKEEDLKKLFEKLEGFITCNIVKSKKAISKK 905
Query: 377 -------------TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVD 423
++G+ V F E A +A + L T G +L L + + +
Sbjct: 906 NQEKGKETEQKLMSQGYGFVEFKSKELAVEAIKKLTATTLDGHVLELSLSRNRVKK---- 961
Query: 424 GKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYG 483
+ + + V E + + +LVKNL ++ +L+ LF FG++ V +P
Sbjct: 962 ------KNNKNNEEKEVVKEKKITKKLLVKNLAFQVTKEELRKLFSAFGNIKSVRIPKNA 1015
Query: 484 IT-----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE-AKEKSKGKEKEK 537
VEF+ KN+ A SL +T L +++A + +F + E K KE+
Sbjct: 1016 YNRSRGYAFVEFMSKNECLTAIESLQHTHLYGRHLIIDFADDFIFDQNVNEFDKLKEEGV 1075
Query: 538 NEEEGEE------GEEEKKENTAEEDNQQGVPE 564
N G + E+ K++ T E++ + V E
Sbjct: 1076 NNNHGSKKQKCITSEQAKRKATYEKEKKNQVTE 1108
>gi|453086560|gb|EMF14602.1| multiple RNA-binding domain-containing protein 1 [Mycosphaerella
populorum SO2202]
Length = 828
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 187/332 (56%), Gaps = 30/332 (9%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F + AR +ILVKN+P +L+ LF+ GD+ R L+PP G +VE+
Sbjct: 478 LDSFKK--SARGDTVILVKNIPADCSRDELRRLFDEQGDVKRFLMPPAGTIAIVEYGNAA 535
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
Q KAAF +LAY + K L+LE AP+ VF+ + +E+ ++T
Sbjct: 536 QCKAAFGTLAYRRVKSSVLFLEKAPKDVFS-----------------AKPVDEQSAQSTP 578
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
E ++ E++++ D TL+++NLNF++T + FK + V
Sbjct: 579 EGVSKLSTSELKDSTVADTAGS----ATLFVRNLNFSTTTSLLTETFKPLDGFLNARVKM 634
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
+ DPK GQ LSMG+GF++F T + AL+ + SL+ H+++++ S++ +A +
Sbjct: 635 RTDPKR-GQ-LSMGFGFLEFQTPKHAQAALQAMDGYSLEGHKLQIRASHKG--EDAAEKR 690
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
+++ K +K++++N+PF+A + +V LF +G+L+ VR+PKKM RGF F +
Sbjct: 691 KQADKAKKAATTKVIIKNLPFEATKKDVRALFGEYGQLRSVRVPKKMDRGA--RGFAFAD 748
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
F T EA+ AM AL + THL GRRLVL++AEE
Sbjct: 749 FTTVKEAQSAMDAL-KDTHLLGRRLVLDFAEE 779
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 180/399 (45%), Gaps = 34/399 (8%)
Query: 33 QLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEK 92
Q + F +KG +TD ++ RR ++G+ + AQ A+ YFN T++ SRI VE
Sbjct: 19 QFRKHFGQKGQITDAKIFPN-----RRIGYVGFKTSEDAQKAVKYFNKTFIRMSRIGVEI 73
Query: 93 CSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGK-KSKNDPTFSDFL 151
+ ++ + + Q L A LK + DSKP + +K DP +FL
Sbjct: 74 ARPIDESPASRRNPTAKVTGANEQPL---AENNQLKRKRDTDSKPHEDAAKEDPKLKEFL 130
Query: 152 QLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSV 211
+ K +++ DE+ I A SD EY ++ K+K T S+
Sbjct: 131 DSYKSKSDKKALVADAMAHPIAMAENDETA-VIIEAGASDDEYEQVPKKAKRTT----SI 185
Query: 212 PPVSKAPVHKRQYHTI---VVKNLPAGVKKKDLKAYFKPL----PLASVRTTFLGMAYIG 264
P PVH+ VV PAG ++ +A K A RT+ L +G
Sbjct: 186 P----KPVHEDSMPDAPVEVVVAEPAGNIEQQPEASGKMAMTDDEWARSRTSRL----LG 237
Query: 265 FKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE 324
D+++ + ++ K + + S+ + + A + +S+ A+ + +
Sbjct: 238 LLDDED--EEISHAKQDDSDSDTEVVRPSRAETRLSTPAPE--PRSSIPTPPAEEEREDD 293
Query: 325 DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVT 384
+ E + + R+FVRNLSY V+ +DL F +G L ++ +P+DK T +KGFA V
Sbjct: 294 VPDKDIEAVRSTMRLFVRNLSYDVSYEDLEAEFSSFGNLEQIHIPLDKTTGSSKGFAYVQ 353
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVD 423
+ P+ A +A DG F GR++H++P K E +D
Sbjct: 354 YTDPDSAEKALVDRDGRTFQGRLIHILPATAK-RENKID 391
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 121/315 (38%), Gaps = 45/315 (14%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCNKALNK 277
I+VKN+PA + +L+ F +P A +A + + + C A
Sbjct: 490 VILVKNIPADCSRDELRRLFDEQGDVKRFLMPPAGT------IAIVEYGNAAQCKAAFGT 543
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
K L + K KD +S D +A + E D A S
Sbjct: 544 LAYRRVKSSVLFLEKAPKD---VFSAKPVDEQSAQSTPEGVSKLSTSELKDSTVADTAGS 600
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPL-----AEVILPID-KETDKTKGFALVTFLMPEH 390
+FVRNL+++ T LT+ F+ PL A V + D K + GF + F P+H
Sbjct: 601 ATLFVRNLNFSTTTSLLTETFK---PLDGFLNARVKMRTDPKRGQLSMGFGFLEFQTPKH 657
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
A A Q +DG G L + E+ + + +
Sbjct: 658 AQAALQAMDGYSLEGHKLQIRASHKGEDAAEKRKQADKAKKA-------------ATTKV 704
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVP---PYGITG--LVEFLQKNQAKAAFNSLAY 505
++KNLP+ D++ALF +G L V VP G G +F +A++A ++L
Sbjct: 705 IIKNLPFEATKKDVRALFGEYGQLRSVRVPKKMDRGARGFAFADFTTVKEAQSAMDALKD 764
Query: 506 TKFKEVPLYLEWAPE 520
T L L++A E
Sbjct: 765 THLLGRRLVLDFAEE 779
>gi|221061355|ref|XP_002262247.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193811397|emb|CAQ42125.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 1049
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 199/342 (58%), Gaps = 20/342 (5%)
Query: 439 NQVVE-ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAK 497
N VV+ RS I+VKNL +T ++ +LF+ +G L +V PY +++F + AK
Sbjct: 650 NHVVKYKRSDDTIIVKNLSIQTNQKEVISLFKKYGVLSKVSFSPYNNIAILQFEKAENAK 709
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEED 557
AF S +Y ++K++PLYLEWAP +F + KE G + N+ E + GE KE ++
Sbjct: 710 KAFISNSYIRYKKLPLYLEWAPMNLF-QKKENQDG-DGSSNKGETKSGEIPAKE-AVKKS 766
Query: 558 NQQGVPEVEENVEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKK------CGPIASV 610
Q+G P+ E++ E E + E ++Y+KNLNFN+ E+ +++ F+K C + S
Sbjct: 767 EQEGAPKEEQHYSESESSDEEITHASIYVKNLNFNTKEEDLKKLFEKLEGFITCNIVKSK 826
Query: 611 TVARKKDP---KSPGQ-FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE--LKRSNR 664
KK+ K P Q LS GYGFV+F ++E +A+K L ++LD H +E L R+
Sbjct: 827 KAISKKNDEKGKEPEQKLLSQGYGFVEFKSKELALEAIKKLTATTLDGHVLELSLSRNRV 886
Query: 665 NLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ +++ K+ K+LV+N+ FQ + E+ +LF AFG +K VR+PK
Sbjct: 887 KKKKNKNNEEKEVVKEKKKITKKLLVKNLAFQVTKEELRKLFSAFGNIKSVRIPKNAYNR 946
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
RG+ FVEF++KNE A+++L Q THLYGR L++++A++
Sbjct: 947 S--RGYAFVEFMSKNECLTAIESL-QHTHLYGRHLIIDFADD 985
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 163/373 (43%), Gaps = 57/373 (15%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---GMAYIGFKDEKNCNKALN 276
+KR TI+VKNL +K++ + FK + S + +F +A + F+ +N KA
Sbjct: 655 YKRSDDTIIVKNLSIQTNQKEVISLFKKYGVLS-KVSFSPYNNIAILQFEKAENAKKAFI 713
Query: 277 KNKSFWKGKQLNIYK-------YSKDNSAKYSGAADDNNNASMENIKAKHW--KSQEDSV 327
N S+ + K+L +Y + K + G+++ S E I AK KS+++
Sbjct: 714 SN-SYIRYKKLPLYLEWAPMNLFQKKENQDGDGSSNKGETKSGE-IPAKEAVKKSEQEGA 771
Query: 328 QFAED----------IAESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVIL----PIDK 372
E I+V+NL++ E+DL KLFEK G + I+ I K
Sbjct: 772 PKEEQHYSESESSDEEITHASIYVKNLNFNTKEEDLKKLFEKLEGFITCNIVKSKKAISK 831
Query: 373 ETDK----------TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNV 422
+ D+ ++G+ V F E A +A + L T G +L L +
Sbjct: 832 KNDEKGKEPEQKLLSQGYGFVEFKSKELALEAIKKLTATTLDGHVLELSLSR-------- 883
Query: 423 DGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY 482
+V ++ + + + + +LVKNL ++ +L+ LF FG++ V +P
Sbjct: 884 -NRVKKKKNKNNEEKEVVKEKKKITKKLLVKNLAFQVTKEELRKLFSAFGNIKSVRIPKN 942
Query: 483 GIT-----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE-AKEKSKGKEKE 536
VEF+ KN+ A SL +T L +++A + +F + E K KE+
Sbjct: 943 AYNRSRGYAFVEFMSKNECLTAIESLQHTHLYGRHLIIDFADDFIFDKNVNEFDKMKEEG 1002
Query: 537 KNEEEGEEGEEEK 549
N G G++EK
Sbjct: 1003 VNNNNG--GKKEK 1013
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 180/449 (40%), Gaps = 97/449 (21%)
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK-------ENEGNVDGKVHCC 429
K +A V F+ P +A Q L+ +F G++L + K K E E N V
Sbjct: 470 VKVYAFVNFMFPSACERAKQFLNHAIFRGKVLSVKYAKEKIGDYEYTEKEKN---NVFIK 526
Query: 430 ISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVE 489
+S ++ +++E + KR +N+ + L TD+ + F + P I +
Sbjct: 527 LSHDSKTSYKKILEIQKKRNCQNENI-WNILYTDINSSIHSFCKENKC--SPNSILNI-- 581
Query: 490 FLQKNQAKAAFNSLAYTKFKEVPLYLEWAP-EGVFAEAKEKSKGKEKEKNEEEGEEGEEE 548
K++ A SL T + EW EG++ EA E+ K E E GE
Sbjct: 582 ---KDRNIAVNVSLTETYI--INKMKEWIKKEGIYLEAFEQIYRKRDEGGEPSGET---- 632
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
+ + DN G N +R D T+ +KNL+ + + + FKK G ++
Sbjct: 633 --DGKTDGDNPPGEEPSHTNHVVKYKR---SDDTIIVKNLSIQTNQKEVISLFKKYGVLS 687
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL--------- 659
V+ SP +++ +QF E+ +A + NS + ++ L
Sbjct: 688 KVSF-------SPYNNIAI----LQFEKAENAKKAF--ISNSYIRYKKLPLYLEWAPMNL 734
Query: 660 --KRSNRNLESEATTVKRKSSNV-AKQ---------------------------TGSKIL 689
K+ N++ + + + KS + AK+ T + I
Sbjct: 735 FQKKENQDGDGSSNKGETKSGEIPAKEAVKKSEQEGAPKEEQHYSESESSDEEITHASIY 794
Query: 690 VRNIPFQAKQSEVEELF---KAFGELKFVR----LPKKMVGSG-------LHRGFGFVEF 735
V+N+ F K+ ++++LF + F V+ + KK G L +G+GFVEF
Sbjct: 795 VKNLNFNTKEEDLKKLFEKLEGFITCNIVKSKKAISKKNDEKGKEPEQKLLSQGYGFVEF 854
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+K A A+K L +T L G L L +
Sbjct: 855 KSKELALEAIKKLTATT-LDGHVLELSLS 882
>gi|124805915|ref|XP_001350574.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23496698|gb|AAN36254.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 1119
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 191/369 (51%), Gaps = 55/369 (14%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS I++KNL T D+ LF+ +G L RV PY ++++ + AK AF S +
Sbjct: 700 RSDDTIIIKNLSIYTNQNDIINLFKQYGILKRVSFSPYNNICIIQYENADNAKKAFISNS 759
Query: 505 YTKFKEVPLYLEWAPEGVFAEAK----EKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQ- 559
Y ++K++PLYLEWAP +FA+ K + + G ++ + E E++ NT + D++
Sbjct: 760 YIRYKKLPLYLEWAPLNLFAKQKDIEDDNNYGMNDKRTIKREETNEDDVTRNTDQYDHKN 819
Query: 560 ---------QGVPEVEENVEED-----------EEREPEPDTTLYIKNLNFNSTEDSIRR 599
NV + +E ++YIKN+NFN+ E+ ++
Sbjct: 820 GDTNDNNNNNNDDGDSHNVNVNDDGDDDEDDDDDEYGEGTHASIYIKNINFNTKEEDLKN 879
Query: 600 HFKK------CGPIASVTVARKKDPKS---PGQF--LSMGYGFVQFYTRESLNQALKVLQ 648
F K C + S V +KD +S Q+ +S GYGF +F +E +A+K L
Sbjct: 880 LFDKMEGFITCNIVKSKKVILQKDKESNKISNQYNTVSSGYGFAEFKNKELAMEAIKRLT 939
Query: 649 NSSLDEHQIELKRSNRNL-----------ESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
+ L++H +E+ S+ + E E +K K KQ K++V+N+ FQ
Sbjct: 940 GTRLNDHLLEMSLSHNRIRKKKNINQKKNEDEKLVLKNK-----KQVTKKLVVKNLAFQV 994
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ E+ +LF AFG +K VR+PK + RG+ F+EF++K E+ A+++L Q THLYGR
Sbjct: 995 NKEELRKLFSAFGNVKSVRIPKNVYNRS--RGYAFIEFMSKKESCNAIESL-QHTHLYGR 1051
Query: 758 RLVLEWAEE 766
L++++A++
Sbjct: 1052 HLIIDFADD 1060
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+ ++ V+NL++ V +++L KLF +G + V +P ++++G+A + F+ + + A
Sbjct: 982 TKKLVVKNLAFQVNKEELRKLFSAFGNVKSVRIP-KNVYNRSRGYAFIEFMSKKESCNAI 1040
Query: 396 QHLDGTVFLGRMLHLI 411
+ L T GR HLI
Sbjct: 1041 ESLQHTHLYGR--HLI 1054
>gi|294944087|ref|XP_002784080.1| RNA-binding domain protein, putative [Perkinsus marinus ATCC 50983]
gi|239897114|gb|EER15876.1| RNA-binding domain protein, putative [Perkinsus marinus ATCC 50983]
Length = 849
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 196/354 (55%), Gaps = 36/354 (10%)
Query: 444 ARSKRIILVKNLPYRTLP-TDLKALFEPF---------GDLGRVLVPPYGITGLVEFLQK 493
+RSK +++K+LP ++ +L+A+ + L ++L+ P + +F+ +
Sbjct: 469 SRSKDTLILKHLPAESVTLAELRAVIGKYVSAAKDSEHSALQKLLLAPTRTVAIAQFVDQ 528
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
A+ AF L+Y +FK PLY+EWAPE +F E K + KG +E + E E E++ +T
Sbjct: 529 KTAQHAFKKLSYRRFKNAPLYVEWAPENIF-EPKSEQKGVGEETRD---EREEAEEEVST 584
Query: 554 AEEDNQQGVPEVEEN--------------VEEDEEREPEPDTTLYIKNLNFNSTEDSIRR 599
E + EV+E EE+EE + ++++K L+F++TE+++R
Sbjct: 585 PMEGVEHETVEVQEQPRSASKEEEEEAVQEEEEEEEDGAGSVSVFVKGLSFDTTEETLRE 644
Query: 600 HFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
HFKK +++RK P G+ LSMG+GFV+F ++ + +K LQ SSLD +EL
Sbjct: 645 HFKKQAGYIKCSISRKTMP--DGRQLSMGFGFVEFKNHKAAKECIKRLQGSSLDGRTLEL 702
Query: 660 KRSNRNLESEATTVKRKSSNVAKQ----TGSKILVRNIPFQAKQSEVEELFKAFGELKFV 715
+ + K + V K +++ VRN+ F+A + ++ +LF +G + V
Sbjct: 703 QIGRGGKAGGGSQSKIGQAGVTKADTKGATNRLCVRNVAFEASRRDIRKLFSTYGNVVAV 762
Query: 716 RLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN 769
R+P K+ SG HRGF FVEF++++EA AM+AL Q THLYGRRLVLE A D
Sbjct: 763 RMPLKVDRSG-HRGFAFVEFVSRSEALAAMEAL-QHTHLYGRRLVLEPAAHEDT 814
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ ++ R+ + NL Y TEDD+ K F+K+G + +V++ D+++ K++G A VT+L PEHA
Sbjct: 259 LMDTARLLLVNLPYIATEDDIKKAFQKFGSIEDVVVLRDEDSKKSRGMAYVTYLFPEHAV 318
Query: 393 QAYQHLDGTVFLGRMLHL--IPGKPKEN 418
+A + G VF GR+L + +PK++
Sbjct: 319 RAKAEMHGKVFQGRVLRIKAAQARPKKH 346
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 33 QLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEK 92
+LK F G VTD ++ T +G+ R F F+G+ +A+ AL +NT++ +SR++V
Sbjct: 24 RLKEFFAAHGEVTDARVIKTKDGRSRCFGFVGFRSPAEAKKALRAVDNTFMDTSRLQVAM 83
Query: 93 CSNLGDTTKPKSWSKYAPDSSAYQ 116
T P++WSKY+ + Q
Sbjct: 84 ALAAHSTRLPRAWSKYSKATQQSQ 107
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+ R+ VRN+++ + D+ KLF YG + V +P+ + +GFA V F+ A A
Sbjct: 732 TNRLCVRNVAFEASRRDIRKLFSTYGNVVAVRMPLKVDRSGHRGFAFVEFVSRSEALAAM 791
Query: 396 QHLDGTVFLGRMLHLIPG 413
+ L T GR L L P
Sbjct: 792 EALQHTHLYGRRLVLEPA 809
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P + ++E F A GE+ R+ K G R FGFV F + EAK+A+
Sbjct: 9 SRVIVKNLPKHVDNARLKEFFAAHGEVTDARVIK--TKDGRSRCFGFVGFRSPAEAKKAL 66
Query: 746 KAL 748
+A+
Sbjct: 67 RAV 69
>gi|345561254|gb|EGX44350.1| hypothetical protein AOL_s00193g78 [Arthrobotrys oligospora ATCC
24927]
Length = 870
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 180/321 (56%), Gaps = 26/321 (8%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
R ++IL+KN Y T +L+AL FG+ RVL+PP G +VEF + +AAF L
Sbjct: 508 RGDKVILIKNFGYGTTVDELRALCNEFGETKRVLMPPTGTIAIVEFSDEPSGRAAFTRLY 567
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
K K+ L +E APE +F + + K+ E G N A+ P
Sbjct: 568 GRKLKDSMLKVEKAPEDLFTTPVDPT--KQTEVTPTTG---------NIAK-------PS 609
Query: 565 VEENVE-EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
+++ + +D E P +L++KNL+F + ++ ++ F + + K DPK+ G+
Sbjct: 610 IKDIISTDDAEAIPGETFSLFVKNLSFATPQEKLKDLFSPLEGFLAARIKMKPDPKNVGK 669
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
+LSMGYGFV+F ++ + A LD H++E++ S++ ++ A +RK +++ K
Sbjct: 670 YLSMGYGFVEFKSKVFADAAAATTNGYFLDGHKLEVRGSHKGDDAAA---ERKKADLRKN 726
Query: 684 TGS-KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
S KI+++N+ F+ + ++ LF +G+L+ VR+PKK + RGFGF +F++ EA+
Sbjct: 727 AASTKIIIKNLAFEVSEKQIRSLFGQYGKLRSVRVPKKF--NRTSRGFGFAQFVSVREAE 784
Query: 743 RAMKALCQSTHLYGRRLVLEW 763
AM+AL + THL+GR LVLEW
Sbjct: 785 NAMEAL-RHTHLHGRPLVLEW 804
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 189/411 (45%), Gaps = 55/411 (13%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
T LK+ F+ + T +Y E RR AFIGY +QA AA+ YF+ +Y+ +SR+
Sbjct: 29 FTTALLKSHFQTLSSTTITDCRYLPE---RRIAFIGYKTPEQANAAVKYFDRSYIKTSRL 85
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLH----------NIAPKQD--LKPEHTKDSK 136
VE + D + + WS P SSAY K H N+ K+D ++ + +D+K
Sbjct: 86 SVELAKSTKDDSLSRPWSANTPGSSAYAKKHSLDEPTAKARNLKRKRDEIVEAKKPEDTK 145
Query: 137 PGKKSKNDPTFSDFLQLH-GKDVSKLLPLSNKDGEEKEEENEDESNNQIAH-------AD 188
+NDP + +++QL G+ +K+ E E +E IA +
Sbjct: 146 GNSLDENDPKYKEYMQLMKGRANTKIW--------ENETAIINEEQPIIAQPPEDESEEE 197
Query: 189 ISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL 248
D+ L+ + K SD P K + + + + DL+ + L
Sbjct: 198 YEDLSGLRFEKKKSKKDTSDALPIPAPKESIPESTEPAV----------EADLEVDPEIL 247
Query: 249 PLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLN---IYKYSKDNSAKYSGAAD 305
P + +T G D + KA+ NK N I K S D A+
Sbjct: 248 PDVAAQT--------GLSD-ADWLKAMTSNKLETVEPPTNEEAIKKGSLDEWGGIDNDAE 298
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
+ +E ++ + KS+ D E I E+GR+F RNLSY++TE +L +LF +G L E
Sbjct: 299 MEDAPELEGVETEAPKSEFDLA--VEKIEETGRLFARNLSYSITESELEELFSPFGELEE 356
Query: 366 VILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
V LP+D ++ KGFA V F P A A++ LD ++F GR LH++PG K
Sbjct: 357 VHLPMDSKSHTPKGFAYVQFASPSSAISAFKALDTSIFQGRSLHILPGTAK 407
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH--RGFGFVEFITKNE 740
+TG ++ RN+ + +SE+EELF FGEL+ V LP + S H +GF +V+F + +
Sbjct: 326 ETG-RLFARNLSYSITESELEELFSPFGELEEVHLP---MDSKSHTPKGFAYVQFASPSS 381
Query: 741 AKRAMKALCQSTHLYGRRL 759
A A KAL S GR L
Sbjct: 382 AISAFKALDTSI-FQGRSL 399
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFK-DEKNCNKALN-------- 276
++ VKNL ++ LK F PL FL A I K D KN K L+
Sbjct: 628 SLFVKNLSFATPQEKLKDLFSPL------EGFLA-ARIKMKPDPKNVGKYLSMGYGFVEF 680
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
K+K F Y D + ++A+ E KA K+ A S
Sbjct: 681 KSKVFADAAAATTNGYFLDGHKLEVRGSHKGDDAAAERKKADLRKN-----------AAS 729
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
+I ++NL++ V+E + LF +YG L V +P K ++GF F+ A A +
Sbjct: 730 TKIIIKNLAFEVSEKQIRSLFGQYGKLRSVRVP-KKFNRTSRGFGFAQFVSVREAENAME 788
Query: 397 HLDGTVFLGRMLHL 410
L T GR L L
Sbjct: 789 ALRHTHLHGRPLVL 802
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 138/379 (36%), Gaps = 93/379 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I ++N Y T D+L L ++G V++P T A+V F A+ L
Sbjct: 513 ILIKNFGYGTTVDELRALCNEFGETKRVLMP------PTGTIAIVEFSDEPSGRAAFTRL 566
Query: 399 DGTVFLGRMLHL---------IPGKP-KENE-----GNV-DGKVHCCISERKLDAFNQVV 442
G ML + P P K+ E GN+ + IS +A
Sbjct: 567 YGRKLKDSMLKVEKAPEDLFTTPVDPTKQTEVTPTTGNIAKPSIKDIISTDDAEAIPGET 626
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPF--------------GDLGRVLVPPYGITGLV 488
+ + VKNL + T LK LF P ++G+ L YG V
Sbjct: 627 FS-----LFVKNLSFATPQEKLKDLFSPLEGFLAARIKMKPDPKNVGKYLSMGYG---FV 678
Query: 489 EFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEA-KEKSKGKEKEKNEEEGEEGEE 547
EF K A AA + G F + K + +G K G++
Sbjct: 679 EFKSKVFADAAAATT----------------NGYFLDGHKLEVRGSHK------GDDAAA 716
Query: 548 EKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPI 607
E+K+ + R+ T + IKNL F +E IR F + G +
Sbjct: 717 ERKKA--------------------DLRKNAASTKIIIKNLAFEVSEKQIRSLFGQYGKL 756
Query: 608 ASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLE 667
SV V +K + S G+GF QF + A++ L+++ L + L+ + +
Sbjct: 757 RSVRVPKKFN------RTSRGFGFAQFVSVREAENAMEALRHTHLHGRPLVLEWAKEEAK 810
Query: 668 SEATTVKRKSSNVAKQTGS 686
++R + V +Q S
Sbjct: 811 DAEEEIQRLTKKVGRQVES 829
>gi|355715636|gb|AES05391.1| RNA binding motif protein 19 [Mustela putorius furo]
Length = 823
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 141/247 (57%), Gaps = 25/247 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK +ILVKN+P TL +L+ F FG LGRVL+P G+T +VEF++
Sbjct: 578 LDSFSQAAAERSKTVILVKNVPAGTLAAELQETFGRFGSLGRVLLPEGGVTAIVEFVEPL 637
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ AF LAY+KF PLYLEWAP GVF+ S + KE + EE++ E
Sbjct: 638 EARKAFRHLAYSKFHHAPLYLEWAPVGVFS----GSAPQTKEPRDPPAGPAEEDRTEPET 693
Query: 555 EEDNQQGVPEVEENVEEDEEREPE-----------------PDTTLYIKNLNFNSTEDSI 597
DN+ PE E+ E P P TL+IKNLNFN+TE+++
Sbjct: 694 LPDNK--TPEDEKPAEGGAADSPAKVEEEEEEEEEEEEESLPGCTLFIKNLNFNTTEETL 751
Query: 598 RRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQI 657
+ F K G + S +V++KK+ G LSMG+GFV++ E +AL+ LQ +D H++
Sbjct: 752 KDVFSKAGTVKSCSVSKKKN--KAGALLSMGFGFVEYRKPEQAQKALRQLQGHVVDGHKL 809
Query: 658 ELKRSNR 664
E++ S R
Sbjct: 810 EVRISER 816
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 112/195 (57%), Gaps = 18/195 (9%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKN 278
+T+ ++ P V +K++ + PL ++R G ++ E+ +AL +
Sbjct: 298 YTVKLRGAPFNVTEKNVTEFLAPLRPVAIRIVRNAHGNKTGYIFVDLSSEEEVKQALRCH 357
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE-DSVQFAEDIAESG 337
+ + G+ + +++ +A+ A +++ A+ W+ + + ED+A+SG
Sbjct: 358 REYMGGRYIEVFREKNVPTAQ----------APLKS-SARPWQGRTLGENEEEEDLADSG 406
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+F+RNL YT TE+DL +LF K+GPL+E+ PID T K KGFA VTF+ PEHA +AY
Sbjct: 407 RLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVRAYAE 466
Query: 398 LDGTVFLGRMLHLIP 412
+DG VF GRMLH++P
Sbjct: 467 VDGQVFQGRMLHVLP 481
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 40/207 (19%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++A+ AL++FN +++ +SRI
Sbjct: 13 MKEERFRQLFGSFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEARTALNHFNKSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKP-EHTKDSKPGK------KS 141
VE C GD TKP++WS++A +S + N + +D P E KD K + K
Sbjct: 73 SVEFCKAFGDPTKPRAWSRHAQKTSQSK---NPSKDKDAVPTEPKKDDKTKRVASELEKL 129
Query: 142 KNDPTFSDFLQLH----------------------GKDVSKLLPLSNKDGEEKEEE---- 175
K D F +FL +H K S L + G+E +EE
Sbjct: 130 KEDTEFQEFLSVHQKRMQTATWANDALDTEASKGKSKAASDYLNFDSDSGQESDEEVASG 189
Query: 176 -NEDESNNQ---IAHADISDMEYLKLK 198
E+E ++ ++SDM+YLK K
Sbjct: 190 DPEEEGGHEPRAAVQTELSDMDYLKSK 216
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 22/183 (12%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
++EP T+ ++ FN TE ++ P+A V K+ GY FV
Sbjct: 291 QKEPTTPYTVKLRGAPFNVTEKNVTEFLAPLRPVAIRIVRNAHGNKT-------GYIFVD 343
Query: 634 FYTRESLNQALK------------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
+ E + QAL+ V + ++ Q LK S R + + ++A
Sbjct: 344 LSSEEEVKQALRCHREYMGGRYIEVFREKNVPTAQAPLKSSARPWQGRTLGENEEEEDLA 403
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
++ +RN+P+ + + ++E+LF FG L + P + + +GF FV F+ A
Sbjct: 404 DS--GRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSL-TKKPKGFAFVTFMFPEHA 460
Query: 742 KRA 744
RA
Sbjct: 461 VRA 463
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 651 SLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFG 710
+L E Q+ ++ R L ++ S A+++ + ILV+N+P +E++E F FG
Sbjct: 557 ALGETQL-VQEVRRFLLDNGVSLDSFSQAAAERSKTVILVKNVPAGTLAAELQETFGRFG 615
Query: 711 ELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
L V LP+ V + VEF+ EA++A + L S + L LEWA
Sbjct: 616 SLGRVLLPEGGVTA-------IVEFVEPLEARKAFRHLAYS-KFHHAPLYLEWA 661
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF +FG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFGSFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEARTAL 59
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM--VGSGLHRGFGFVEFITKNEAK 742
G + ++N+ F + ++++F G +K + KK G+ L GFGFVE+ +A+
Sbjct: 734 GCTLFIKNLNFNTTEETLKDVFSKAGTVKSCSVSKKKNKAGALLSMGFGFVEYRKPEQAQ 793
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEA 767
+A++ L Q + G +L + +E A
Sbjct: 794 KALRQL-QGHVVDGHKLEVRISERA 817
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEHATQ 393
+F++NL++ TE+ L +F K G + + K+ +K + GF V + PE A +
Sbjct: 737 LFIKNLNFNTTEETLKDVFSKAGTVKSC--SVSKKKNKAGALLSMGFGFVEYRKPEQAQK 794
Query: 394 AYQHLDGTVFLGRMLHL 410
A + L G V G L +
Sbjct: 795 ALRQLQGHVVDGHKLEV 811
>gi|399216364|emb|CCF73052.1| unnamed protein product [Babesia microti strain RI]
Length = 717
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 176/338 (52%), Gaps = 28/338 (8%)
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEF 490
S L+ + + RS I+VKNL ++T +L+ LF G L R + PY +V++
Sbjct: 380 SHNNLNGDDDSSKLRSCDTIIVKNLSFKTDEDELRDLFAKKGQLMRFSISPYRNMCIVQY 439
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
L AK AF LAY + +P+YLEWAP ++ K N EE++
Sbjct: 440 LNAEDAKKAFTGLAYKNYLGMPIYLEWAPCHLY------KKHAPTIDNLNTQTSNYEEEE 493
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
N E+D+ V + ++YIKNLNF + + + + C + +
Sbjct: 494 PNCYEDDSNDMVDGLH--------------ASIYIKNLNFITNNEKLHQLMSGCDGLITC 539
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V + D + LSMG+GF +F T ++ A+K+L LD H +E +++ S
Sbjct: 540 KVITRYDS-VKDKTLSMGFGFAEFVTLDAAKAAIKLLTGKLLDGHLLEFSLADKT-HSVK 597
Query: 671 TTVKRKSSNVAKQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 727
+VKR + T +K+ ++N+ FQA +SEV +LF +G ++ VR+PK M S +
Sbjct: 598 KSVKRTRARGKIGTCKVSNKLSIKNLAFQATKSEVRKLFSLYGNVRTVRIPKSMSNS--N 655
Query: 728 RGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE 765
RGF FVEF +K++A A++AL Q THLYGR L+L++A+
Sbjct: 656 RGFAFVEFESKSDAVNALEAL-QHTHLYGRHLILDFAQ 692
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 193/479 (40%), Gaps = 92/479 (19%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK--------TKGFALVTFLMPE 389
R+ + NL Y V+ED+L KL + +GP+ ++ +P K T+ T+GFA +TFL
Sbjct: 178 RVVLFNLPYNVSEDELRKLVKNFGPITQIHIPASKFTESDNNKVMNLTRGFAYITFLFDV 237
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A + Q D T+F GR+L ++P K G +D + IS +K D + +A K
Sbjct: 238 DAGRFLQEKDKTIFCGRLLSILPAKVNIT-GAIDDISNDRISIKKRDTCKRGYKAELKER 296
Query: 450 IL-------VKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNS 502
++ + N Y + T ++A+ + G + R + L+ + + +
Sbjct: 297 LMEDAENQDIWNTLYIDINTAIQAVSDELG-ISR-----------DQLLRTSDKHSVAVT 344
Query: 503 LAYTKFKEVPLYLEWA-PEGVFAEAKEKSKGKE-KEKNEEEGEEGEEEKKENTAEEDNQQ 560
A ++ + W EGV + ++S+ K K N G
Sbjct: 345 AASSETAVIAKLKNWLNEEGVDIDCFQRSQLKHFKSHNNLNG------------------ 386
Query: 561 GVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
+D+ + T+ +KNL+F + ED +R F K G + ++ S
Sbjct: 387 ----------DDDSSKLRSCDTIIVKNLSFKTDEDELRDLFAKKGQLMRFSI-------S 429
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNL-------------- 666
P + + + VQ+ E +A L + I L+ + +L
Sbjct: 430 PYRNMCI----VQYLNAEDAKKAFTGLAYKNYLGMPIYLEWAPCHLYKKHAPTIDNLNTQ 485
Query: 667 -----ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLP 718
E E + S+++ + I ++N+ F ++ +L L K +
Sbjct: 486 TSNYEEEEPNCYEDDSNDMVDGLHASIYIKNLNFITNNEKLHQLMSGCDGLITCKVITRY 545
Query: 719 KKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRT 777
+ L GFGF EF+T + AK A+K L L G L A++ +V+ KRT
Sbjct: 546 DSVKDKTLSMGFGFAEFVTLDAAKAAIKLL-TGKLLDGHLLEFSLADKTHSVKKSVKRT 603
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++ ++NL++ T+ ++ KLF YG + V +P ++ +GFA V F A A
Sbjct: 615 SNKLSIKNLAFQATKSEVRKLFSLYGNVRTVRIP-KSMSNSNRGFAFVEFESKSDAVNAL 673
Query: 396 QHLDGTVFLGRMLHLIPGKPKE 417
+ L T GR L L +P +
Sbjct: 674 EALQHTHLYGRHLILDFAQPTQ 695
>gi|196011704|ref|XP_002115715.1| hypothetical protein TRIADDRAFT_59687 [Trichoplax adhaerens]
gi|190581491|gb|EDV21567.1| hypothetical protein TRIADDRAFT_59687 [Trichoplax adhaerens]
Length = 319
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 172/353 (48%), Gaps = 75/353 (21%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L++ + + RSK +I+VKNLP+ T +L LF +G + RV++PP GIT LVE+ +
Sbjct: 27 LESLTKPCKERSKTVIIVKNLPFGTKKNELCELFSEYGSIERVIIPPSGITALVEYTKDI 86
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+A+ F LAY+KF ++ ++ E K K +N +
Sbjct: 87 EARNGFRKLAYSKF------VKCINHCIYLFVDEDGKVDAKTQNLQR------------- 127
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
T++I+NLNF + E +R+ +
Sbjct: 128 ---------------------------TIFIRNLNFQTDECRLRKVYH------------ 148
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKR---SNRNLESEAT 671
+ +G G + T + + K E IE ++ + S+ +
Sbjct: 149 --------LYFRLGSGLLAQLTNKFFQEFRK------FSEPNIETEKMPNGQSRIYSQTS 194
Query: 672 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
T+K+ S K +KILV+N+PF+A +SEV+++F FGE+K +R+P+K HRGF
Sbjct: 195 TIKKNMSVSNKPNTTKILVKNLPFEATKSEVKQIFSVFGEIKCIRIPRKYGQRKQHRGFT 254
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTA 784
F+EFITK +AKRA AL STHLYGRRL+L+WAEE ++ IR++T F T
Sbjct: 255 FIEFITKADAKRAFTALQDSTHLYGRRLILQWAEEDQDITAIRQKTATKFFTG 307
>gi|290993156|ref|XP_002679199.1| RNA binding domain-containing protein [Naegleria gruberi]
gi|284092815|gb|EFC46455.1| RNA binding domain-containing protein [Naegleria gruberi]
Length = 763
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 196/356 (55%), Gaps = 50/356 (14%)
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKA-LFEPFG----DLGRVLVPPYGITGLVEFLQK 493
NQV ++R+ ILVKN+P+ LK L++ F + R+++P L+EF +
Sbjct: 414 NQVKQSRT--TILVKNIPFNENTEKLKQELYDLFAFKTRRISRLIIPSSRTIALIEFYEP 471
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+A+ AF LAY F VPLYL+WAPEGV KE+ K ++KE+ E++ E+ +E
Sbjct: 472 VEARQAFTHLAYKNFYNVPLYLQWAPEGVLPPKKEEEKKEKKEEQEKKEEKKKEGPVRVA 531
Query: 554 AE-EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
E +DNQQ T L+IKNLNF +TEDS+R FK P + V
Sbjct: 532 DEGDDNQQS-------------------TVLFIKNLNFKTTEDSLRELFKSYNPRSVRIV 572
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN--RNLESEA 670
K G+GF +F + +A + L N+ LD H + + SN N+++ +
Sbjct: 573 VENGKSK--------GFGFAEFNNVKEAVKAHEELHNAQLDNHILVIHYSNIQSNVKT-S 623
Query: 671 TTVKRKSSNVAKQ--------TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV 722
T K K +V+ + T K++VRN+ F+A + ++ +LF A+G++K VRLPKK V
Sbjct: 624 TEPKLKKQDVSFKDEEKGVTVTFKKLVVRNVAFEATRQDLLQLFSAYGQVKTVRLPKK-V 682
Query: 723 GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEA--DNVEDIRKR 776
GS HRGF F+EF++ E A +AL S HLYGR L +E++E+ DN++D+ R
Sbjct: 683 GSNSHRGFAFIEFVSPKECHAAYQALKHS-HLYGRTLKIEFSEDVNMDNIKDVHAR 737
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 77/119 (64%), Gaps = 5/119 (4%)
Query: 305 DDNNNASMENIKAKHWK----SQEDSVQFAE-DIAESGRIFVRNLSYTVTEDDLTKLFEK 359
DDNN ++ + + + K +ED + F E D ++GR+FV NL +T TED+L +LFE
Sbjct: 190 DDNNESATKKKREEDSKIEPAEKEDVLYFDENDDEDTGRLFVYNLHFTTTEDELKELFEP 249
Query: 360 YGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
+G ++E+ +PID ET ++G A V FL+PE+A +A + L ++F GRM+H+ K K N
Sbjct: 250 FGEISELHIPIDNETKISRGVAFVHFLIPENADKAKKALHNSIFQGRMIHIAKAKEKPN 308
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 23/201 (11%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
+D +S +F++NL++ TED L +LF+ Y P + I+ E K+KGF F +
Sbjct: 534 GDDNQQSTVLFIKNLNFKTTEDSLRELFKSYNPRSVRIVV---ENGKSKGFGFAEFNNVK 590
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A +A++ L +L + + N+ V +E KL + + K +
Sbjct: 591 EAVKAHEELHNAQLDNHILVI-------HYSNIQSNVKTS-TEPKLKKQDVSFKDEEKGV 642
Query: 450 ------ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAK 497
++V+N+ + DL LF +G + V +P + +EF+ +
Sbjct: 643 TVTFKKLVVRNVAFEATRQDLLQLFSAYGQVKTVRLPKKVGSNSHRGFAFIEFVSPKECH 702
Query: 498 AAFNSLAYTKFKEVPLYLEWA 518
AA+ +L ++ L +E++
Sbjct: 703 AAYQALKHSHLYGRTLKIEFS 723
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T Q K FEE G VTD ++ T GK R F +IGY + ++A A++ + T++ ++I
Sbjct: 46 VTNSQFKKLFEEFGQVTDAKIMQTKTGKSRCFGYIGYKKHEEAVHAINERHQTFIGMAKI 105
Query: 89 KVEKCSNLGDTTKPKSWSKYA---PDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDP 145
VE D+ SK++ +SA + K+D+ E + GKK + P
Sbjct: 106 IVEFALPYNDSRLDAPRSKHSNVKAATSASGVKSSTFEKKDVNEEVDQFLNVGKKKASAP 165
Query: 146 TFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTA 205
F E + EDE ++Q+ I + + ++ +K
Sbjct: 166 KFW------------------------ENDLEDEFDDQLKKDKIINEKDDNNESATKKKR 201
Query: 206 PSDPSVPPVSKAPV------HKRQYHTIVVKNLPAGVKKKDLKAYFKP--------LPLA 251
D + P K V + V NL + +LK F+P +P+
Sbjct: 202 EEDSKIEPAEKEDVLYFDENDDEDTGRLFVYNLHFTTTEDELKELFEPFGEISELHIPID 261
Query: 252 SVRTTFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYK 291
+ G+A++ F +N +KA + S ++G+ ++I K
Sbjct: 262 NETKISRGVAFVHFLIPENADKAKKALHNSIFQGRMIHIAK 302
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 127/328 (38%), Gaps = 67/328 (20%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
+ V NL + T +LK LFEPFG++ + +P T V FL A A +L
Sbjct: 229 LFVYNLHFTTTEDELKELFEPFGEISELHIPIDNETKISRGVAFVHFLIPENADKAKKAL 288
Query: 504 AYTKFKEVPLYLEWAPE--GVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQG 561
+ F+ +++ A E E + GK K K E+ ++ +E N
Sbjct: 289 HNSIFQGRMIHIAKAKEKPNFNVEKENMFLGKSKFKREQL-----KKLREQAGSSHNWNA 343
Query: 562 VPEVEENVEEDEERE-PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
V E R+ + L + N +F++ +D+ A+V +A
Sbjct: 344 THMATNTVMESMSRQLGVSKSELLMNNKDFSNVDDN-----------AAVRMA------- 385
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNV 680
E + Q + LQ +H I L N K +N
Sbjct: 386 -------------LAETELIKQTKEELQ-----DHGINLDLLN------------KPANQ 415
Query: 681 AKQTGSKILVRNIPFQAKQSEV-EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
KQ+ + ILV+NIPF ++ +EL+ F K R+ + ++ S R +EF
Sbjct: 416 VKQSRTTILVKNIPFNENTEKLKQELYDLFA-FKTRRISRLIIPSS--RTIALIEFYEPV 472
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWAEEA 767
EA++A L + Y L L+WA E
Sbjct: 473 EARQAFTHLAYK-NFYNVPLYLQWAPEG 499
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 109/283 (38%), Gaps = 68/283 (24%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLA 504
I+VK LP + K LFE FG + +++ G + G + + + +A A N
Sbjct: 37 IIVKGLPSHVTNSQFKKLFEEFGQVTDAKIMQTKTGKSRCFGYIGYKKHEEAVHAINERH 96
Query: 505 YTKFKEVPLYLEWA-----------------------PEGVFAEAKEKSK---------- 531
T + +E+A GV + EK
Sbjct: 97 QTFIGMAKIIVEFALPYNDSRLDAPRSKHSNVKAATSASGVKSSTFEKKDVNEEVDQFLN 156
Query: 532 -GKEKE------KNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREP------- 577
GK+K +N+ E E ++ KK+ E + ++ EED + EP
Sbjct: 157 VGKKKASAPKFWENDLEDEFDDQLKKDKIINEKDDNNESATKKKREEDSKIEPAEKEDVL 216
Query: 578 -------EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
E L++ NL+F +TED ++ F+ G I+ + + + K +S G
Sbjct: 217 YFDENDDEDTGRLFVYNLHFTTTEDELKELFEPFGEISELHIPIDNETK-----ISRGVA 271
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRS----NRNLESE 669
FV F E+ ++A K L NS I + ++ N N+E E
Sbjct: 272 FVHFLIPENADKAKKALHNSIFQGRMIHIAKAKEKPNFNVEKE 314
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
++ V N+ F + E++ELF+ FGE+ + +P + + RG FV F+ A +A K
Sbjct: 228 RLFVYNLHFTTTEDELKELFEPFGEISELHIPIDN-ETKISRGVAFVHFLIPENADKAKK 286
Query: 747 ALCQSTHLYGRRLVLEWAEEADN 769
AL S GR + + A+E N
Sbjct: 287 ALHNSI-FQGRMIHIAKAKEKPN 308
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 160/551 (29%), Positives = 263/551 (47%), Gaps = 91/551 (16%)
Query: 227 IVVKNLPAGVKKKDLKAYFKP--------LPLASVRTTFLGMAYIGFKDEKNCNKALNK- 277
I+V NLP ++D++ F+ LP+ V G A++ + ++ KA N+
Sbjct: 215 ILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNEM 274
Query: 278 NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG 337
+ KG+ +++ Y+K + Y+ ++ + ++ KA K + S QF
Sbjct: 275 DGQVIKGRIIHV-NYAKADP--YAQTTEEKEAKTYKDKKANELKKRA-SNQF-----NWA 325
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
+++R + +T + E+ G E L ++ + TF++ E T+ Y
Sbjct: 326 TLYMR------PDTAITAVAEQLGMAKEKFLDVNSSNLAVRAALAETFVINE--TKKY-- 375
Query: 398 LDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
LG D V+C + E L+ E R I+VKN+
Sbjct: 376 ------LG-----------------DRGVNCTVLENGLN------EKRGNTAIIVKNIAA 406
Query: 458 RTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEW 517
++K +FE G L R L+P + EF+Q N AK AF + Y+++K VPLYLEW
Sbjct: 407 NADQGEIKTMFENCGKLKRFLMPKSKALAIAEFIQPNDAKTAFKRIVYSRYKGVPLYLEW 466
Query: 518 APEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREP 577
APE +F E+ K+ EE + EKKE+ E + V E
Sbjct: 467 APERLF---------NEEAKSTEEEVPKKVEKKESPKEGGELELVEEGTH---------- 507
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
TLYIKN+N +TED++R+ F + G I SV+++ K+P S + F++F
Sbjct: 508 ----TLYIKNVNPKTTEDTLRKVFTQYGQIHSVSIS--KNPTSSKNV----FCFLEFARH 557
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
S A+K Q +D + I ++ S + ++K+ +V T K+LV+N+PF+
Sbjct: 558 SSALNAMKNAQGQLVDGNAIAIELSIPKKDDFTHAKRKKAEDVTAST--KLLVKNLPFET 615
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+EV ELF+ +G L+ VR+PKK+ G +G+ F+E+ TK EA A A+ S HLYGR
Sbjct: 616 NLNEVRELFRVYGTLRGVRVPKKI--DGQLKGYAFIEYATKQEAANAKAAMANS-HLYGR 672
Query: 758 RLVLEWAEEAD 768
LV+E+A+E +
Sbjct: 673 HLVIEFAKETE 683
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query: 321 KSQEDSVQFAEDIA-ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKG 379
+S+ED +Q E+ E GRI V NL Y +E D+ + FEK+G + EV LPIDK + KTKG
Sbjct: 196 QSEEDEIQVPENENWEEGRILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKG 255
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
FA V +++P+ A +A+ +DG V GR++H+
Sbjct: 256 FAFVMYVVPQDAVKAFNEMDGQVIKGRIIHV 286
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 182/482 (37%), Gaps = 95/482 (19%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKY-TTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y +++ ++ FE+ G +T+V L GK + FAF+ Y A A + + +
Sbjct: 222 YACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNEMDGQVIKG 281
Query: 86 SRIKVE--KCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKN 143
I V K TT+ K Y KD K + K
Sbjct: 282 RIIHVNYAKADPYAQTTEEKEAKTY------------------------KDKKANELKKR 317
Query: 144 DPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKD 203
++ L+ + + + ++ + G KE+ + S+N A ++ E + K
Sbjct: 318 ASNQFNWATLYMRPDTAITAVAEQLGMAKEKFLDVNSSNLAVRAALA--ETFVINETKKY 375
Query: 204 TAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYI 263
+ + KR I+VKN+ A + ++K F
Sbjct: 376 LGDRGVNCTVLENGLNEKRGNTAIIVKNIAANADQGEIKTMF------------------ 417
Query: 264 GFKDEKNCNKALNKNKSFW--KGKQLNIYKYSKDNSAK----------YSGAA------- 304
+NC K K F K K L I ++ + N AK Y G
Sbjct: 418 -----ENCGKL----KRFLMPKSKALAIAEFIQPNDAKTAFKRIVYSRYKGVPLYLEWAP 468
Query: 305 ----DDNNNASMENI--KAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFE 358
++ ++ E + K + +S ++ + + ++++N++ TED L K+F
Sbjct: 469 ERLFNEEAKSTEEEVPKKVEKKESPKEGGELELVEEGTHTLYIKNVNPKTTEDTLRKVFT 528
Query: 359 KYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
+YG + V + + + K F + F A A ++ G + G + + PK+
Sbjct: 529 QYGQIHSVSISKNPTSSKN-VFCFLEFARHSSALNAMKNAQGQLVDGNAIAIELSIPKK- 586
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
D H ++RK + V A +K +LVKNLP+ T +++ LF +G L V
Sbjct: 587 ----DDFTH---AKRKKA---EDVTASTK--LLVKNLPFETNLNEVRELFRVYGTLRGVR 634
Query: 479 VP 480
VP
Sbjct: 635 VP 636
>gi|68075777|ref|XP_679808.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500633|emb|CAH98045.1| conserved hypothetical protein [Plasmodium berghei]
Length = 997
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 187/353 (52%), Gaps = 51/353 (14%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS I+VKNL T D+ LF+ G L ++ PY ++++ Q AK A S +
Sbjct: 603 RSDDTIIVKNLSMHTNENDIINLFKKHGILKKISFSPYKNIAILQYEQPENAKKALISNS 662
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y ++K++PLYLEWAP +F + + ++G EE E + +N A+ P
Sbjct: 663 YIRYKKLPLYLEWAPINLFEQNSKNTEG-----TIEENENSNDISYQNNAK-------PY 710
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK------CGPIASVTVARKK-- 616
E+ +E+ +++YIKN+NFN+ E+ ++ F+K C + S V ++K
Sbjct: 711 DSESSDEEITH-----SSIYIKNINFNTKEEDFKKLFEKLDGFITCNIVKSKKVIKQKHK 765
Query: 617 ------------DPKSPG-------QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQI 657
D + G +++S+GYGF +F ++E +A+K L + LD H +
Sbjct: 766 DNKKDKENDKNNDNEGTGDKTEEEHKYISLGYGFAEFKSKELAIEAIKKLTATRLDGHVL 825
Query: 658 EL----KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELK 713
EL R +N ++ +++ K+ K+LV+N+ FQ + E+++LF AFG +K
Sbjct: 826 ELSLSHNRIKKNKQAYKNNEEKQVIKDKKKITKKLLVKNLAFQVTKEELKKLFSAFGNIK 885
Query: 714 FVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
VR+PK RG+GFVEF++KNE A+ AL Q THLYGR L++++A +
Sbjct: 886 NVRIPKNAYNRS--RGYGFVEFMSKNECLAAINAL-QHTHLYGRHLIIDFAND 935
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 161/396 (40%), Gaps = 79/396 (19%)
Query: 200 KSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS--VRTTF 257
K +++ P + K +KR TI+VKNL + D+ FK + + +
Sbjct: 581 KKENSKPENDENDETDKVIKYKRSDDTIIVKNLSMHTNENDIINLFKKHGILKKISFSPY 640
Query: 258 LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIY------KYSKDNSAKYSGAADDNNNAS 311
+A + ++ +N KAL N S+ + K+L +Y + NS G ++N N++
Sbjct: 641 KNIAILQYEQPENAKKALISN-SYIRYKKLPLYLEWAPINLFEQNSKNTEGTIEENENSN 699
Query: 312 MENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPI 370
+I ++ DS E+I S I+++N+++ E+D KLFEK G + I+
Sbjct: 700 --DISYQNNAKPYDSESSDEEITHSS-IYIKNINFNTKEEDFKKLFEKLDGFITCNIVKS 756
Query: 371 -------------DKETDKTK------------------GFALVTFLMPEHATQAYQHLD 399
DKE DK G+ F E A +A + L
Sbjct: 757 KKVIKQKHKDNKKDKENDKNNDNEGTGDKTEEEHKYISLGYGFAEFKSKELAIEAIKKLT 816
Query: 400 GTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR----------- 448
T G +L L +S ++ Q + ++
Sbjct: 817 ATRLDGHVLEL------------------SLSHNRIKKNKQAYKNNEEKQVIKDKKKITK 858
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSL 503
+LVKNL ++ +LK LF FG++ V +P G VEF+ KN+ AA N+L
Sbjct: 859 KLLVKNLAFQVTKEELKKLFSAFGNIKNVRIPKNAYNRSRGYGFVEFMSKNECLAAINAL 918
Query: 504 AYTKFKEVPLYLEWAPEGVFAE-AKEKSKGKEKEKN 538
+T L +++A + +F + E K KE + N
Sbjct: 919 QHTHLYGRHLIIDFANDLIFDQNVDEFDKMKESQNN 954
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 181/440 (41%), Gaps = 92/440 (20%)
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK-ENEGNVD---GKVHCCISE 432
K +A V+F+ P +A +L+ T++ G++L + + K +N +++ + +S
Sbjct: 431 VKTYAFVSFVFPSSCEKAKNNLNETIYRGKILSVKYAREKIDNSEHLEKNKNNIFIKLSN 490
Query: 433 RKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQ 492
++ +++E + KR +++ + L TD+ + F P I + +
Sbjct: 491 ESKTSYKKILEIQKKRNCQNESI-WNILYTDINSNIYNF--CKETNCDPQSILNIRD--- 544
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWA-PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
KN A +++ T+ + EW EG+ EA E+ KE K
Sbjct: 545 KNIAV----NVSLTETFIINKMKEWIRKEGIALEAFEQIYKKENSK-------------- 586
Query: 552 NTAEEDNQQGVPEVEENVEEDEE-REPEPDTTLYIKNLNFNSTEDSIRRHFKKCG----- 605
PE +EN E D+ + D T+ +KNL+ ++ E+ I FKK G
Sbjct: 587 -----------PENDENDETDKVIKYKRSDDTIIVKNLSMHTNENDIINLFKKHGILKKI 635
Query: 606 ---PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVL----QNSSLDEHQIE 658
P ++ + + + P++ + L + +++ Y + L + QNS E IE
Sbjct: 636 SFSPYKNIAILQYEQPENAKKAL-ISNSYIR-YKKLPLYLEWAPINLFEQNSKNTEGTIE 693
Query: 659 LKRSNRNLESEATTVKRKSSNVAKQ--TGSKILVRNIPFQAKQSEVEELFK---AFGELK 713
+ N N S K S + + T S I ++NI F K+ + ++LF+ F
Sbjct: 694 -ENENSNDISYQNNAKPYDSESSDEEITHSSIYIKNINFNTKEEDFKKLFEKLDGFITCN 752
Query: 714 FVRLPKKMV--------------------GSG---------LHRGFGFVEFITKNEAKRA 744
V+ KK++ G+G + G+GF EF +K A A
Sbjct: 753 IVK-SKKVIKQKHKDNKKDKENDKNNDNEGTGDKTEEEHKYISLGYGFAEFKSKELAIEA 811
Query: 745 MKALCQSTHLYGRRLVLEWA 764
+K L +T L G L L +
Sbjct: 812 IKKLT-ATRLDGHVLELSLS 830
>gi|345313394|ref|XP_003429381.1| PREDICTED: probable RNA-binding protein 19-like, partial
[Ornithorhynchus anatinus]
Length = 271
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 145/249 (58%), Gaps = 27/249 (10%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD+F+Q RSK ++LVKNLP T T+L+ +F FG LGRVL+P G+T +VEFL+
Sbjct: 32 LDSFSQAAAERSKSVMLVKNLPAGTRATELEEIFGRFGGLGRVLLPDGGVTAIVEFLEPA 91
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFA------EAKEKSKGKEKEKNEEEGEEGEEE 548
QA+ AF LAY+KF VPLYLEWAP G+F EA + E+ E G +GE +
Sbjct: 92 QARRAFTHLAYSKFHHVPLYLEWAPMGIFGSSDPQKEAPPEGPAGEENARAEAGADGETD 151
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPE-----------PDTTLYIKNLNFNSTEDSI 597
N G+P E E++EE+E E P TL+IKNLNF++TE+++
Sbjct: 152 VDIN--------GLPGEEAEAEKEEEKEEEEEDEEDEDENLPGCTLFIKNLNFSTTEETL 203
Query: 598 RRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQI 657
+ F K G + + ++++K + G S+G+GFV + E +AL+ LQ +D H++
Sbjct: 204 KEAFSKAGAVRTCSISKKTN--RAGTQHSLGFGFVGYRRPEQAQKALRQLQGCLVDGHKV 261
Query: 658 ELKRSNRNL 666
E+K S R +
Sbjct: 262 EVKISERAI 270
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 651 SLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFG 710
+L E Q+ ++ R L + S A+++ S +LV+N+P + +E+EE+F FG
Sbjct: 11 ALGETQL-VQELRRFLLDHGVCLDSFSQAAAERSKSVMLVKNLPAGTRATELEEIFGRFG 69
Query: 711 ELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
L V LP V + VEF+ +A+RA L S + L LEWA
Sbjct: 70 GLGRVLLPDGGVTA-------IVEFLEPAQARRAFTHLAYS-KFHHVPLYLEWA 115
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-----GFALVTFLMPEHATQ 393
+F++NL+++ TE+ L + F K G A I K+T++ GF V + PE A +
Sbjct: 189 LFIKNLNFSTTEETLKEAFSKAG--AVRTCSISKKTNRAGTQHSLGFGFVGYRRPEQAQK 246
Query: 394 AYQHLDGTVFLG 405
A + L G + G
Sbjct: 247 ALRQLQGCLVDG 258
>gi|156084440|ref|XP_001609703.1| RNA-binding protein P22H7.02c [Babesia bovis T2Bo]
gi|154796955|gb|EDO06135.1| RNA-binding protein P22H7.02c, putative [Babesia bovis]
Length = 702
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 176/328 (53%), Gaps = 27/328 (8%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS I++KNL + +L LF +G L R+ + PY + G+V+++ A AF +A
Sbjct: 399 RSDDTIIIKNLSKESCEHELVELFSQYGTLMRLSISPYQVMGIVQYIDPKCASTAFKKMA 458
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y +K +P+Y+EWAP +F E + + E + +T G P+
Sbjct: 459 YRPYKGLPIYVEWAPVKLFHEDAPRPVLATTPTTLDPKPTEEVDYFTDTV------GDPD 512
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC-GPIASVTVARKKDPKSPGQ 623
+E +T++YIKNL+F + D+++ HF C G I S + + D
Sbjct: 513 MEHA-------SLGSNTSVYIKNLHFKTRNDALQHHFGSCKGYITSKVLLKDNDT----- 560
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
LS G+GFV+F + + A++ +D IE+ + R + A + K + K
Sbjct: 561 -LSRGFGFVEFDSLVNAKAAIRAKTGLIIDGKVIEMSIAKRVDKPVAEVPEHK---LLKA 616
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
T SKI+V+N+ FQA + ++ +LF +G +K VR+PK + + +RGF FVE+ +K E+ R
Sbjct: 617 T-SKIIVKNLAFQATKQDLYKLFSFYGNVKSVRIPKSLKSN--NRGFAFVEYSSKQESAR 673
Query: 744 AMKALCQSTHLYGRRLVLEWAEEADNVE 771
A+++L Q +HLYGR LVLE+AEE +N E
Sbjct: 674 AVESL-QHSHLYGRHLVLEFAEEDENSE 700
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-------TKGFALVTFLMPEH 390
R+ + NL Y VTE + +L +GP+ EV LP++K D TKG+ VT++ P
Sbjct: 190 RVVIFNLPYNVTESAIRELCRPFGPITEVHLPLNKSLDTDSTQDKLTKGYCYVTWVFPSD 249
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISER 433
A + + ++F GR++H+ KP+++ + DG + ++ R
Sbjct: 250 AIKFRDAKNRSIFCGRIIHVDLAKPRKSSAS-DGSTYDILNRR 291
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+ +I V+NL++ T+ DL KLF YG + V +P +++ +GFA V + + + +A
Sbjct: 617 TSKIIVKNLAFQATKQDLYKLFSFYGNVKSVRIPKSLKSN-NRGFAFVEYSSKQESARAV 675
Query: 396 QHLDGTVFLGRMLHLIPGKPKEN 418
+ L + GR L L + EN
Sbjct: 676 ESLQHSHLYGRHLVLEFAEEDEN 698
>gi|156103151|ref|XP_001617268.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148806142|gb|EDL47541.1| RNA binding protein, putative [Plasmodium vivax]
Length = 1127
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 194/363 (53%), Gaps = 38/363 (10%)
Query: 439 NQVVE-ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAK 497
N VV+ RS I+VKNL +T ++ +LF+ FG L +V PY +++F + AK
Sbjct: 704 NHVVKYKRSDDTIIVKNLSVQTNQKEVISLFKKFGVLSKVSFSPYNNIAILQFEKAENAK 763
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKS--------------------KGKEKEK 537
AF S +Y ++K++PLYLEWAP +F ++
Sbjct: 764 KAFISNSYIRYKKLPLYLEWAPMNLFERKGDQDGRGSGGSGGSGGSGESGGIGGSSGSRG 823
Query: 538 NEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDT--TLYIKNLNFNSTED 595
+ +GE E + N A + ++QG EE + E E T ++YIKNLNFN+ E+
Sbjct: 824 SGSKGETNEGDTPANEAVKKSEQGAAPKEEQHHSESESSDEEITHASIYIKNLNFNTKEE 883
Query: 596 SIRRHFKK------CGPIASVTVARKKD---PKSPGQ-FLSMGYGFVQFYTRESLNQALK 645
+++ F+K C + S KK+ K+P Q +S GYGFV+F ++E +A+K
Sbjct: 884 DLKKLFEKLDGFITCNIVKSKKAISKKNLEKGKAPEQKLMSQGYGFVEFKSKELAVEAIK 943
Query: 646 VLQNSSLDEHQIE--LKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVE 703
L ++LD H +E L R+ + +++ K+ K+LV+N+ FQ + E+
Sbjct: 944 KLTATTLDGHVLELSLSRNRVKKKKNKNNEEKEVVKEKKKITKKLLVKNLAFQVTKEELR 1003
Query: 704 ELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEW 763
+LF AFG +K VR+PK RG+ FVEF++KNE A+++L Q THLYGR L++++
Sbjct: 1004 KLFSAFGNIKSVRIPKNAYNRS--RGYAFVEFMSKNECLTAIESL-QHTHLYGRHLIIDF 1060
Query: 764 AEE 766
A++
Sbjct: 1061 ADD 1063
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 30/257 (11%)
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK--ENEGNVDGK--VHCCISE 432
K +A V F+ P +A L+ +F G++L + K K + E GK V +S
Sbjct: 500 VKVYAFVNFMFPSACERAKNILNNAIFRGKVLSVKYAKDKCGDYEYTEKGKNNVFIKLSH 559
Query: 433 RKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQ 492
++ +++E + KR +N+ + L TD+ + F + P I +
Sbjct: 560 DSKTSYKKILEIQKKRNCQNENI-WNLLYTDINSSIHSFCKENKC--SPQSILNI----- 611
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWA-PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
+++ A SL T + EW EG++ EA E+ K E E G+EG E +
Sbjct: 612 RDRNIAVNVSLTETYI--INKMKEWIRKEGIYLEAFEQIYKKRSEGEEPSGKEGGEPSGK 669
Query: 552 NTAEEDNQQGV-PEVEENVEEDEEREP--EP------------DTTLYIKNLNFNSTEDS 596
+AE D + G P +N E E P EP D T+ +KNL+ + +
Sbjct: 670 PSAETDGKAGGEPSANQNGETSGEGPPGEEPSRANHVVKYKRSDDTIIVKNLSVQTNQKE 729
Query: 597 IRRHFKKCGPIASVTVA 613
+ FKK G ++ V+ +
Sbjct: 730 VISLFKKFGVLSKVSFS 746
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 343 NLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTV 402
NL++ VT+++L KLF +G + V +P + ++++G+A V F+ A + L T
Sbjct: 992 NLAFQVTKEELRKLFSAFGNIKSVRIPKN-AYNRSRGYAFVEFMSKNECLTAIESLQHTH 1050
Query: 403 FLGRMLHLI 411
GR HLI
Sbjct: 1051 LYGR--HLI 1057
>gi|82793820|ref|XP_728191.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484422|gb|EAA19756.1| RNA recognition motif, putative [Plasmodium yoelii yoelii]
Length = 767
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 188/362 (51%), Gaps = 51/362 (14%)
Query: 436 DAFNQVVE-ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
D ++VV+ RS I+VKNL T D+ LF+ G L ++ PY ++++ +
Sbjct: 364 DETDKVVKYKRSDDTIIVKNLSMHTNENDIINLFKKHGILKKISFSPYKNIAILQYEKPE 423
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
AK A S +Y ++K++PLYLEWAP +F + + ++G EE E + +N A
Sbjct: 424 DAKKALISNSYIRYKKLPLYLEWAPVNLFEQNNKNTEGTT-----EENENYNDTSHQNNA 478
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
E P E+ +E+ +++YIKN+NFN+ E+ ++ F+K + + +
Sbjct: 479 E-------PYDSESSDEEITH-----SSIYIKNINFNTKEEDFKKLFEKLDGFITCNIVK 526
Query: 615 KK--------------------DPKSPG-------QFLSMGYGFVQFYTRESLNQALKVL 647
K D G +++S+GYGF +F ++E +A+K L
Sbjct: 527 SKKAIKQKHKDNKQDKENDKNNDSGGNGDKTEEENKYISLGYGFAEFKSKELAIEAIKKL 586
Query: 648 QNSSLDEHQIELKRSNRNLESEATTV---KRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ LD H +EL S+ ++ +++ K+ K+LV+N+ FQ + E+++
Sbjct: 587 TATKLDGHVLELSLSHNRIKKNKQAYNNEEKQVIKDKKKITKKLLVKNLAFQVTKEELKK 646
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
LF AFG +K VR+PK RG+GFVEF++KNE A+ AL Q THLYGR L++++A
Sbjct: 647 LFSAFGNIKNVRIPKNAYNRS--RGYGFVEFMSKNECLAAINAL-QHTHLYGRHLIIDFA 703
Query: 765 EE 766
+
Sbjct: 704 ND 705
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 160/393 (40%), Gaps = 74/393 (18%)
Query: 200 KSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLAS--VRTTF 257
K ++ P + K +KR TI+VKNL + D+ FK + + +
Sbjct: 352 KKENAKPENDENDETDKVVKYKRSDDTIIVKNLSMHTNENDIINLFKKHGILKKISFSPY 411
Query: 258 LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIY------KYSKDNSAKYSGAADDNNNAS 311
+A + ++ ++ KAL N S+ + K+L +Y + N+ G ++N N +
Sbjct: 412 KNIAILQYEKPEDAKKALISN-SYIRYKKLPLYLEWAPVNLFEQNNKNTEGTTEENENYN 470
Query: 312 MENIKAKHWKSQE--DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVIL 368
H + E DS E+I S I+++N+++ E+D KLFEK G + I+
Sbjct: 471 ----DTSHQNNAEPYDSESSDEEITHSS-IYIKNINFNTKEEDFKKLFEKLDGFITCNIV 525
Query: 369 PI-------------DKETDKTK------------------GFALVTFLMPEHATQAYQH 397
DKE DK G+ F E A +A +
Sbjct: 526 KSKKAIKQKHKDNKQDKENDKNNDSGGNGDKTEEENKYISLGYGFAEFKSKELAIEAIKK 585
Query: 398 LDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQ------VVEARSKRIIL 451
L T G +L L H I + K A+N + + + +L
Sbjct: 586 LTATKLDGHVLELSLS-------------HNRIKKNK-QAYNNEEKQVIKDKKKITKKLL 631
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYT 506
VKNL ++ +LK LF FG++ V +P G VEF+ KN+ AA N+L +T
Sbjct: 632 VKNLAFQVTKEELKKLFSAFGNIKNVRIPKNAYNRSRGYGFVEFMSKNECLAAINALQHT 691
Query: 507 KFKEVPLYLEWAPEGVFAE-AKEKSKGKEKEKN 538
L +++A + +F + E K KE + N
Sbjct: 692 HLYGRHLIIDFANDLIFDQNVDEFDKMKESQNN 724
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 183/451 (40%), Gaps = 114/451 (25%)
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK-ENEGNVD---GKVHCCISE 432
K +A V+F+ P +A +L+ T++ G++L + + K +N N++ + +S
Sbjct: 202 VKTYAFVSFVFPSSCEKAKNNLNETIYRGKVLSVKYAREKIDNSENLEKNKNNIFIKLSN 261
Query: 433 RKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQ 492
++ +++E + KR +N+ + L TD+ + F P I + +
Sbjct: 262 ESKTSYKKILEIQKKRNCQNENI-WNILYTDINSNIYNF--CKETNCDPQSILNIRD--- 315
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWA-PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
KN A +++ T+ + EW EG+ EA E+ KE K
Sbjct: 316 KNIAV----NVSLTETFIINKMKEWIRKEGIALEAFEQIYKKENAK-------------- 357
Query: 552 NTAEEDNQQGVPEVEENVEEDE-EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
PE +EN E D+ + D T+ +KNL+ ++ E+ I FKK G + +
Sbjct: 358 -----------PENDENDETDKVVKYKRSDDTIIVKNLSMHTNENDIINLFKKHGILKKI 406
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL----------K 660
+ SP + +++ +Q+ E +AL + NS + ++ L +
Sbjct: 407 SF-------SPYKNIAI----LQYEKPEDAKKAL--ISNSYIRYKKLPLYLEWAPVNLFE 453
Query: 661 RSNRNLESEATTVKRKSSNVAKQ----------------TGSKILVRNIPFQAKQSEVEE 704
++N+N +E TT + ++ N T S I ++NI F K+ + ++
Sbjct: 454 QNNKN--TEGTTEENENYNDTSHQNNAEPYDSESSDEEITHSSIYIKNINFNTKEEDFKK 511
Query: 705 LFK---AFGELKFVRLPKKMV-------------------GSG---------LHRGFGFV 733
LF+ F V+ K + G+G + G+GF
Sbjct: 512 LFEKLDGFITCNIVKSKKAIKQKHKDNKQDKENDKNNDSGGNGDKTEEENKYISLGYGFA 571
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
EF +K A A+K L +T L G L L +
Sbjct: 572 EFKSKELAIEAIKKLT-ATKLDGHVLELSLS 601
>gi|71028784|ref|XP_764035.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350989|gb|EAN31752.1| hypothetical protein, conserved [Theileria parva]
Length = 727
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 182/331 (54%), Gaps = 21/331 (6%)
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKF 508
I+L+KNLP+ T DL LF G + R P+ + GLV+F K++ AF +L+Y F
Sbjct: 405 ILLIKNLPHDTEDRDLIRLFSSCGKITRFTTSPFKLLGLVQFSSKSECDKAFRTLSYRMF 464
Query: 509 KEVPLYLEWAPEGVFAEAKE-KSKGKEKEKN-EEEGEEGEE--EKKENTAEEDNQQGVPE 564
+ +PLYL+ P+ + +S G E + + +G E E +K ++T + D+ E
Sbjct: 465 QGLPLYLQKVPKSLLPNVNTVQSDGIEIDSGPQRDGVESNEVVDKVDDTLDPDDTVDADE 524
Query: 565 VEEN-VEEDEEREPE--PDTTLYIKNLNFNSTEDSIRRHFKKC-GPIASVTV---ARKKD 617
V++N E+ ER E ++Y+ N++ + +E+ RHF G + S + K +
Sbjct: 525 VDQNGTAEEPERAVERIGHVSVYVSNIDESVSEEEFSRHFSGLKGFVISKIIKPHGTKLE 584
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS-NRNLESEATTVKRK 676
KS + YGF++F + + +A+K + + I L+ S N+ S ++ K K
Sbjct: 585 EKSSAR-----YGFIEFDSINNAKEAIKRRIGTVIGTKIISLELSKNKQTISNYSSRKHK 639
Query: 677 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
++ I+V+N+PFQA + E+ ELFK + +K VR+PK HRGFGFV F+
Sbjct: 640 DPGPTEE-NDVIIVKNLPFQATKKELLELFKYYSNVKTVRIPKS--AGNTHRGFGFVVFM 696
Query: 737 TKNEAKRAMKALCQSTHLYGRRLVLEWAEEA 767
+KN+AK AM+ L ++ HLYGRRLVL++ E +
Sbjct: 697 SKNDAKLAMENL-KNVHLYGRRLVLQYVENS 726
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPI------------DKETDKTKGFALVTF 385
R+ + NL Y VTE+ + KL + YG + ++ +P+ D ET T+G VTF
Sbjct: 198 RVVIFNLPYNVTEEMIRKLVKPYGKVEQIHIPLTKRNITEITSGNDIETFLTRGMCFVTF 257
Query: 386 LMPEHATQAYQHLDGTVFLGRML 408
A + + + T+F GR++
Sbjct: 258 TFESDALEFIEQKNNTIFSGRII 280
>gi|342878293|gb|EGU79648.1| hypothetical protein FOXB_09931 [Fusarium oxysporum Fo5176]
Length = 759
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 151/281 (53%), Gaps = 22/281 (7%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
L+AF + R ILVKN PY T +L+ LFE G + RVL+PP G +V+F Q N
Sbjct: 498 LEAFKS--KKRGDTAILVKNFPYGTTIDELRKLFEESGPVLRVLMPPSGTIAIVQFSQPN 555
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
AK+AF LAY + + L+LE AP +F +G ++ ++ +N +
Sbjct: 556 YAKSAFGKLAYRRIGDSVLFLEKAPSDIF-------RGGDQLDQAVSLKDRPAPTVQNLS 608
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
+D + EE++E T+L+++NLNF+++ + F+ S V
Sbjct: 609 VDDLLSRGDKPEEDLET---------TSLFVRNLNFSTSTSRLAEAFQSLDGFVSARVKT 659
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK 674
K DPK PGQ LSMG+GFV+F TR ALKV+ LD+H + +K S++ +A +
Sbjct: 660 KMDPKKPGQTLSMGFGFVEFRTRSQAQAALKVMDGHVLDDHALAVKASHKG--HDAAEER 717
Query: 675 RKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELK 713
R+ K G +KI+++N+PFQA + ++ LF +G+L+
Sbjct: 718 RREDKAKKAAGQRTKIIIKNLPFQATKKDIRSLFGTYGQLR 758
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E I + R+FVRNL Y+ T++DL + FE++G + EV LP+ + +KGFALV F P
Sbjct: 321 EAIRRTSRLFVRNLPYSATQEDLRETFERFGTIEEVHLPVSN-SGTSKGFALVLFTDPSG 379
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
A +A+Q +DG F GR+LH+IP K + G
Sbjct: 380 AVEAFQAMDGATFQGRILHIIPASAKRDTG 409
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 50/202 (24%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPI--------ASVTVARKKDPK-SPGQFLSMGYG 630
DT + +KN + +T D +R+ F++ GP+ ++ + + P + F + Y
Sbjct: 508 DTAILVKNFPYGTTIDELRKLFEESGPVLRVLMPPSGTIAIVQFSQPNYAKSAFGKLAYR 567
Query: 631 FVQ-------------FYTRESLNQALKV-------LQNSSLDEHQIELKRSNRNLESEA 670
+ F + L+QA+ + +QN S+D+ L R ++ E
Sbjct: 568 RIGDSVLFLEKAPSDIFRGGDQLDQAVSLKDRPAPTVQNLSVDDL---LSRGDKPEEDLE 624
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM----VGSGL 726
TT + VRN+ F S + E F++ R+ KM G L
Sbjct: 625 TT--------------SLFVRNLNFSTSTSRLAEAFQSLDGFVSARVKTKMDPKKPGQTL 670
Query: 727 HRGFGFVEFITKNEAKRAMKAL 748
GFGFVEF T+++A+ A+K +
Sbjct: 671 SMGFGFVEFRTRSQAQAALKVM 692
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 173/477 (36%), Gaps = 84/477 (17%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
Y TQE L+ FE GT+ +V L + G + FA + + A A + F
Sbjct: 336 YSATQEDLRETFERFGTIEEVHLPVSNSGTSKGFALVLFTDPSGAVEAFQAMDGA-TFQG 394
Query: 87 RI-KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDP 145
RI + S DT ++A +K + I KQ+ T + D
Sbjct: 395 RILHIIPASAKRDT----GLDEFAISKLPLKKQNMIRKKQEAA--ATTFNWNALYMSQDA 448
Query: 146 TFSDFLQLHGKDVSKLLPLSNKDGEEKE---EENEDESNNQIAHADISDMEYLKLKTKSK 202
+ G S+LL ++ D K+ E + + A+ D+E K K K
Sbjct: 449 VNASVADRLGVSKSELLDPTSADAAIKQAIAETSVIQETKAYFTANGVDLEAFKSK-KRG 507
Query: 203 DTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYF-KPLPLASVRTTFLG-M 260
DTA I+VKN P G +L+ F + P+ V G +
Sbjct: 508 DTA---------------------ILVKNFPYGTTIDELRKLFEESGPVLRVLMPPSGTI 546
Query: 261 AYIGFKDEKNCNKALNK-----------------NKSFWKGKQLNIYKYSKDNSAKYSGA 303
A + F A K + F G QL+ KD A
Sbjct: 547 AIVQFSQPNYAKSAFGKLAYRRIGDSVLFLEKAPSDIFRGGDQLDQAVSLKDRPAPTV-- 604
Query: 304 ADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL 363
N S++++ ++ K +ED E+ +FVRNL+++ + L + F+
Sbjct: 605 ----QNLSVDDLLSRGDKPEED--------LETTSLFVRNLNFSTSTSRLAEAFQSLDGF 652
Query: 364 AEVILPIDKETDK-----TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
+ + K + GF V F A A + +DG V L +
Sbjct: 653 VSARVKTKMDPKKPGQTLSMGFGFVEFRTRSQAQAALKVMDGHVLDDHALAV-------- 704
Query: 419 EGNVDGKVHCCISERKL-DAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL 474
K H ER+ D + R+K I++KNLP++ D+++LF +G L
Sbjct: 705 --KASHKGHDAAEERRREDKAKKAAGQRTK--IIIKNLPFQATKKDIRSLFGTYGQL 757
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S++ VRN+P+ A Q ++ E F+ FG ++ V LP + SG +GF V F + A A
Sbjct: 327 SRLFVRNLPYSATQEDLRETFERFGTIEEVHLP--VSNSGTSKGFALVLFTDPSGAVEAF 384
Query: 746 KALCQSTHLYGRRL 759
+A+ +T GR L
Sbjct: 385 QAMDGAT-FQGRIL 397
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 9/129 (6%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
I++ + F +G +TDV+L RR ++GY + A A+ YFN +Y+ S+
Sbjct: 15 ISEADFRKHFSAQGREITDVKLIPQ-----RRIGYVGYKTPEDASKAVKYFNRSYIRMSK 69
Query: 88 IKVEKCSNLGD---TTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKND 144
I VE + D T +W A + + N P + + K + D
Sbjct: 70 IAVETARPISDPALTKGQSAWHSKAASTPSTTIKGNEQPAERESDSSLRKRKRDEPQPAD 129
Query: 145 PTFSDFLQL 153
P +FL +
Sbjct: 130 PKLREFLHV 138
>gi|387196381|gb|AFJ68758.1| rna binding motif protein 19 [Nannochloropsis gaditana CCMP526]
Length = 291
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 126/213 (59%), Gaps = 24/213 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFK-------------KCGPIASVTVARKKDPKSPGQ--FLS 626
TL++KNLNF ++E+ + HFK K P+ + K+ KS LS
Sbjct: 53 TLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPALS 112
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGS 686
MGYGFV++ AL+ ++ + LD H+++ K S + L + K N K+T
Sbjct: 113 MGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSARVPPAK----NREKRT-- 166
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
K++VRN+ FQA EV+ELF FG++K VRLPKK GS HRGF FVEF+T EA A
Sbjct: 167 KLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGS--HRGFAFVEFLTAQEANNAFV 224
Query: 747 ALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNR 779
AL STHLYG+RLVLEWAE+ ++VE +R++ +
Sbjct: 225 ALS-STHLYGKRLVLEWAEDKEDVETLREKATK 256
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 46/209 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFE-KYGPLAEVILP-----------IDKETDKTK-------- 378
+FV+NL++ +E+ L F+ K + V +P + KET K+
Sbjct: 54 LFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPALSM 113
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDA 437
G+ V + A A + ++GT ++DG ++ C +S ++L A
Sbjct: 114 GYGFVEYAGVAQAQAALRAMEGT-------------------DLDGHRLQCKLSTKRLSA 154
Query: 438 FNQVVEARSKRI-ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-----PYGITGLVEFL 491
+ R KR ++V+N+ ++ P ++K LF FG + V +P + VEFL
Sbjct: 155 RVPPAKNREKRTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFL 214
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPE 520
+A AF +L+ T L LEWA +
Sbjct: 215 TAQEANNAFVALSSTHLYGKRLVLEWAED 243
>gi|313234383|emb|CBY24582.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 131/198 (66%), Gaps = 10/198 (5%)
Query: 583 LYIKNLNFNSTEDSIRRHF-KKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+++KN+NF +T++S++ F KK G + +++++ + G++LSMGYG+V+ + + +
Sbjct: 8 IFVKNVNFGTTDESLKELFEKKIGKVVECSISKRLER---GKYLSMGYGWVKMASPDLAS 64
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGS-KILVRNIPFQAKQS 700
+A+K +Q LD H+I LK S + E E ++++ N + GS KI+VRN+PFQ +
Sbjct: 65 KAVKTIQGIELDGHRINLKISKK--EEEKLNNRQEAKNQDQPEGSCKIMVRNVPFQCQVP 122
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
E+E+LF FGELKFVR+PK G HRGF FVEF +A A KAL STH+YGRRLV
Sbjct: 123 ELEQLFSTFGELKFVRMPKNPTGK--HRGFAFVEFKLAADASSAFKALKLSTHIYGRRLV 180
Query: 761 LEWAEE-ADNVEDIRKRT 777
LEWA+ +++ IR +T
Sbjct: 181 LEWADSNTESISAIRTKT 198
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 339 IFVRNLSYTVTEDDLTKLFEK-YGPLAEVILPIDKETDK--TKGFALVTFLMPEHATQAY 395
IFV+N+++ T++ L +LFEK G + E + E K + G+ V P+ A++A
Sbjct: 8 IFVKNVNFGTTDESLKELFEKKIGKVVECSISKRLERGKYLSMGYGWVKMASPDLASKAV 67
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ + G G ++L K +E + N + +A NQ S +I +V+N+
Sbjct: 68 KTIQGIELDGHRINLKISKKEEEKLN-----------NRQEAKNQDQPEGSCKI-MVRNV 115
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVP--PYGIT---GLVEFLQKNQAKAAFNSLAY-TKFK 509
P++ +L+ LF FG+L V +P P G VEF A +AF +L T
Sbjct: 116 PFQCQVPELEQLFSTFGELKFVRMPKNPTGKHRGFAFVEFKLAADASSAFKALKLSTHIY 175
Query: 510 EVPLYLEWA 518
L LEWA
Sbjct: 176 GRRLVLEWA 184
>gi|401399856|ref|XP_003880652.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
gi|325115063|emb|CBZ50619.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
Length = 1099
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 177/351 (50%), Gaps = 46/351 (13%)
Query: 445 RSKRIILVKNLPYRTL-PTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSL 503
RS+ ++VK+LP + +L LFE G L R L+ P +V++ ++ A+ AF L
Sbjct: 757 RSRDTLIVKHLPTAHVDGAELLRLFERVGPLARFLLAPSKTVAIVQYEREKDAEVAFRRL 816
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
AY ++K VPL+LE AP VF E +E+ + K EE ++ V
Sbjct: 817 AYRQYKNVPLFLEKAPVNVFVEREEEMQAARKRAAEE-------------VRAAKKRKVK 863
Query: 564 EVEE----NVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--- 616
++EE + D+ E +L++KN+NF+++E ++ F C + + KK
Sbjct: 864 DIEELIGNDATGDDFEEEVQGVSLFVKNVNFSTSEATLNDVFAGCPGLRRTKLMTKKKAI 923
Query: 617 ------------DPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEH--QIELKR- 661
DP+S LSMGY FV+F + + A K +Q +D+H QI + R
Sbjct: 924 TSNATGSTENGDDPQSAAS-LSMGYAFVEFDSAANALAACKRMQGVVVDDHVLQISISRA 982
Query: 662 SNRNLESEATTVKRKSSNVA------KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFV 715
S + T K + + + +K+LV+N+ FQA S++ LF A+G + V
Sbjct: 983 SGAHRRVPGTGAKARGGASSAGGKGHQAQSNKVLVKNLAFQASASDLRGLFSAYGNVTRV 1042
Query: 716 RLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
+P++ G RGF FV+F TK EA+ A+ AL S HLYGRRLVLE A +
Sbjct: 1043 CIPRQH--EGRSRGFAFVDFATKQEAQNAVDALSGS-HLYGRRLVLEPANQ 1090
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ GR+ ++NL + D+L L E+YG +AE L +D+ET K +GF VTF+ PEHA
Sbjct: 490 LGSHGRLLIQNLPFATAVDELRALCEEYGEVAEAHLVVDEETRKPRGFGFVTFVFPEHAV 549
Query: 393 QAYQHLDGTVFLGRMLHLIPGKP 415
A L+G++F GR+L P +P
Sbjct: 550 AALPRLNGSIFQGRLLGAFPARP 572
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A+S ++ V+NL++ + DL LF YG + V +P E +++GFA V F + A
Sbjct: 1010 AQSNKVLVKNLAFQASASDLRGLFSAYGNVTRVCIPRQHE-GRSRGFAFVDFATKQEAQN 1068
Query: 394 AYQHLDGTVFLGRMLHLIP 412
A L G+ GR L L P
Sbjct: 1069 AVDALSGSHLYGRRLVLEP 1087
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 29 ITQEQLKAKFEE-KGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT +LK K G +TDV L GK R+ AF+G+ + QA D+F+NT++ + +
Sbjct: 224 ITTTELKQKLTSLGGEITDVCLLRNERGKSRQCAFVGFKTQQQAANVKDHFHNTFIHTRK 283
Query: 88 IKV 90
+++
Sbjct: 284 VEI 286
>gi|452823111|gb|EME30124.1| RNA-binding protein [Galdieria sulphuraria]
Length = 713
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 139/252 (55%), Gaps = 35/252 (13%)
Query: 435 LDAFNQVVEA-RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+DA N + RSK +ILVKNLP TL ++ LF FG L +V++ P + GLVEF++
Sbjct: 469 VDALNDSKDGPRSKTVILVKNLPATTLEKEVVDLFMKFGALRQVIMAPSCLIGLVEFIEA 528
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
N AK A+ +LAY+KFK+ PLYLEWA + +F
Sbjct: 529 NDAKRAYRALAYSKFKDRPLYLEWASQDIF-----------------------------L 559
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFKKCGPIAS 609
+ + V +EE EEDE D T+L++KNL+FN+TED +RR F+K P+ S
Sbjct: 560 MKPSSDSNVMMIEEKQEEDEPSSNNLDRIGRTSLFVKNLDFNTTEDQLRRVFEKVAPVRS 619
Query: 610 VTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESE 669
VT+A KK+ S +S+G+GFV++ T + +AL LQ + +D H + LK S R+ +
Sbjct: 620 VTIA-KKNKISASAPVSLGFGFVEYATEKDAQRALNQLQGTVIDGHAVVLKLSERSGGKK 678
Query: 670 ATTVKRKSSNVA 681
+ K+ S +V
Sbjct: 679 ISEPKKVSDSVC 690
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
+NN+ EN ++ K +S + ++ E+GR+FVRNL+Y+VT+++LTKLFEKYG L++
Sbjct: 266 ENNDTKSENFSVENTKDSTNS--NSSNVLETGRLFVRNLAYSVTDEELTKLFEKYGLLSD 323
Query: 366 VILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPG-KPKENE 419
V + ID ET K KGFA +TF++PE+A QA LDG +F GR+LH++P P NE
Sbjct: 324 VHVCIDSETQKAKGFAFITFVLPENAAQAMAELDGHIFQGRLLHILPAMAPIRNE 378
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 18/125 (14%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
I +++LK F +G VTDV++ +G RRF F+G+ QA+AA DYF+ T++ +SRI
Sbjct: 18 IAEKRLKDIFSSQGEVTDVKVLRKKDGTCRRFGFVGFKTVKQAKAAKDYFHETFIDTSRI 77
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
+VE +GD P+ K P + + N PK+ + E + DP F
Sbjct: 78 QVEYAKPVGDQNLPR---KRKP-----KLVENELPKRYREKEQER----------DPAFQ 119
Query: 149 DFLQL 153
+FLQ+
Sbjct: 120 EFLQV 124
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
D + P T + +KNL + E + F K G + V +A P + G
Sbjct: 474 DSKDGPRSKTVILVKNLPATTLEKEVVDLFMKFGALRQVIMA-------PSCLI----GL 522
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNL-------ESEATTVKRK-------S 677
V+F +A + L S + + L+ +++++ +S ++ K S
Sbjct: 523 VEFIEANDAKRAYRALAYSKFKDRPLYLEWASQDIFLMKPSSDSNVMMIEEKQEEDEPSS 582
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK---MVGSGLHRGFGFVE 734
+N+ + + + V+N+ F + ++ +F+ ++ V + KK + + GFGFVE
Sbjct: 583 NNLDRIGRTSLFVKNLDFNTTEDQLRRVFEKVAPVRSVTIAKKNKISASAPVSLGFGFVE 642
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEA 767
+ T+ +A+RA+ L Q T + G +VL+ +E +
Sbjct: 643 YATEKDAQRALNQL-QGTVIDGHAVVLKLSERS 674
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 29/212 (13%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVR------TTFLGMA-YIGFKDEKNCNKA 274
R I+VKNLPA +K++ F + ++R + +G+ +I D K +A
Sbjct: 480 RSKTVILVKNLPATTLEKEVVDLF--MKFGALRQVIMAPSCLIGLVEFIEANDAKRAYRA 537
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
L +K +K + L + S+D + D+N +E + QE+ + ++
Sbjct: 538 LAYSK--FKDRPLYLEWASQD--IFLMKPSSDSNVMMIE-------EKQEEDEPSSNNLD 586
Query: 335 ESGR--IFVRNLSYTVTEDDLTKLFEKYGPLAEVILP----IDKETDKTKGFALVTFLMP 388
GR +FV+NL + TED L ++FEK P+ V + I + GF V +
Sbjct: 587 RIGRTSLFVKNLDFNTTEDQLRRVFEKVAPVRSVTIAKKNKISASAPVSLGFGFVEYATE 646
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
+ A +A L GTV G H + K E G
Sbjct: 647 KDAQRALNQLQGTVIDG---HAVVLKLSERSG 675
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 648 QNSSLDEHQIEL------KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE 701
+N + E +I L K N ++E+ + SSNV +TG ++ VRN+ + E
Sbjct: 253 KNDEMVEKEITLTENNDTKSENFSVENTKDSTNSNSSNVL-ETG-RLFVRNLAYSVTDEE 310
Query: 702 VEELFKAFGELKFVRLPKKMVGSGLH--RGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
+ +LF+ +G L V + + S +GF F+ F+ A +AM L H++ RL
Sbjct: 311 LTKLFEKYGLLSDVHV---CIDSETQKAKGFAFITFVLPENAAQAMAEL--DGHIFQGRL 365
Query: 760 V 760
+
Sbjct: 366 L 366
>gi|145538427|ref|XP_001454919.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422696|emb|CAK87522.1| unnamed protein product [Paramecium tetraurelia]
Length = 656
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/323 (36%), Positives = 168/323 (52%), Gaps = 51/323 (15%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RS I VKN+ +R TDL LF +G + +V + P G++ QA AF++L
Sbjct: 383 RSNITIFVKNIQFRVNETDLNELFSRYGQVNKVYLAPNRSIGIITMQDDKQANNAFSNLQ 442
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
KFK LYLEWAP + E+ N E NQQ
Sbjct: 443 NYKFKGSILYLEWAPTTLMGES-------------------------NKTNEVNQQV--- 474
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK-KCGPIASVTVARKKDPKSPGQ 623
EE+E E LY+KNLNF++TE ++ + K I VT+ K+
Sbjct: 475 --------EEQENELTRILYVKNLNFSTTEKNLLKFMSSKVNDIKKVTIINKEG------ 520
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
+S GYGF++F ES + L+ L N LD+H ++L +S + + KRK +
Sbjct: 521 -VSQGYGFIEFDKPESAQKVLR-LNNLILDDHLLQLSQSKPKPKQDLN--KRKQKQEIEP 576
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
T +K+L++N+PF+A E+ L K +GELK +RLPKK+ GS RGF F EF+ EA+
Sbjct: 577 T-NKLLIKNLPFEANAQELRRLVKQYGELKKLRLPKKLDGS--IRGFAFAEFLNNEEAQN 633
Query: 744 AMKALCQSTHLYGRRLVLEWAEE 766
A ++L QSTH YGRRLV+E+++E
Sbjct: 634 AAESL-QSTHFYGRRLVIEYSKE 655
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 30/223 (13%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+ QLK FE+KG V+DV++ + K RRF FIGY E A A ++F+ T+V S+I
Sbjct: 13 ITEAQLKTIFEKKGEVSDVKVIFKG-NKNRRFCFIGYKNESDAIKAKEHFDKTFVMMSKI 71
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHN-----IAPKQDLKPEHTKDSKPGKKSKN 143
V+ + D P++WS++ P SSA+QK++ + K E ++ + K
Sbjct: 72 SVDFAKTVDDPALPRAWSRHTPGSSAFQKINKSQEPPVTKKVKQNKEDQQEQEEPKNEVK 131
Query: 144 DPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKL-KTKSK 202
F +FL+L +NK ++ N D NNQ+ D + K+ K K K
Sbjct: 132 SKKFQEFLELMK---------TNKKTNQEISWN-DNVNNQV------DEIFEKIEKEKPK 175
Query: 203 DTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYF 245
S P A V++R+ + V N+P +++LK F
Sbjct: 176 VVQQPQKSTP----ANVNERRLY---VTNIPYTSTEQELKTVF 211
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R++V N+ YT TE +L +FEKYG ++ + +P + GF V + +PE A +A+
Sbjct: 192 RLYVTNIPYTSTEQELKTVFEKYGTVSSIKIP-KQRGGSLSGFCFVEYQLPEEAIRAFSE 250
Query: 398 LDGTVFLGRMLHLIPG 413
LD + LGR+ H+ P
Sbjct: 251 LDNKIVLGRIFHVRPA 266
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 128/518 (24%), Positives = 209/518 (40%), Gaps = 86/518 (16%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
Y T+++LK FE+ GTV+ +++ G F F+ Y ++A A +N V
Sbjct: 200 YTSTEQELKTVFEKYGTVSSIKIPKQRGGSLSGFCFVEYQLPEEAIRAFSELDNKIVLGR 259
Query: 87 RIKV------EKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKK 140
V +K L + K + S+Y+K + L
Sbjct: 260 IFHVRPAFKDDKEEQLKQEQQMKQEKMIGEEKSSYKKFKKQQMLERL------------- 306
Query: 141 SKNDPTFSDFLQLHG----KDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLK 196
ND T + L L+ + + K L K E EEN+D + ++ ME
Sbjct: 307 --NDTTSWNTLFLNPNTIIEGICKKYSLDKK--EILSEENDDMA------VKMAQMETQV 356
Query: 197 LKTKSKDTAPS---DPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASV 253
+K ++KD S + V K R TI VKN+ V + DL F V
Sbjct: 357 IK-ETKDWLKSIGLNIDFLKVEKNQCE-RSNITIFVKNIQFRVNETDLNELFS--RYGQV 412
Query: 254 RTTFLG----MAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNN 309
+L + I +D+K N A + N+ Y S Y A
Sbjct: 413 NKVYLAPNRSIGIITMQDDKQANNAFS-----------NLQNYKFKGSILYLEWAPT--- 458
Query: 310 ASMENIKAKHWKSQEDSVQFAEDIAESGRI-FVRNLSYTVTEDDLTKLF-EKYGPLAEVI 367
+ + K+ E + Q E E RI +V+NL+++ TE +L K K + +V
Sbjct: 459 ----TLMGESNKTNEVNQQVEEQENELTRILYVKNLNFSTTEKNLLKFMSSKVNDIKKVT 514
Query: 368 LPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVH 427
+ I+KE ++G+ + F PE A Q L+ + +L L KPK +
Sbjct: 515 I-INKE-GVSQGYGFIEFDKPESA-QKVLRLNNLILDDHLLQLSQSKPKPKQD------- 564
Query: 428 CCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY---GI 484
+++RK Q +E +K +L+KNLP+ +L+ L + +G+L ++ +P I
Sbjct: 565 --LNKRKQK---QEIEPTNK--LLIKNLPFEANAQELRRLVKQYGELKKLRLPKKLDGSI 617
Query: 485 TG--LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPE 520
G EFL +A+ A SL T F L +E++ E
Sbjct: 618 RGFAFAEFLNNEEAQNAAESLQSTHFYGRRLVIEYSKE 655
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
++ V NIP+ + + E++ +F+ +G + +++PK+ GS GF FVE+ EA RA
Sbjct: 192 RLYVTNIPYTSTEQELKTVFEKYGTVSSIKIPKQRGGS--LSGFCFVEYQLPEEAIRAFS 249
Query: 747 AL 748
L
Sbjct: 250 EL 251
>gi|13548328|emb|CAC35875.1| putative protein [Arabidopsis thaliana]
Length = 768
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 173/349 (49%), Gaps = 69/349 (19%)
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFN 501
V+ RSK I+LVK+LP+ + +L +F FG L ++++PP LV FL+ +A+AA N
Sbjct: 455 VKNRSKHILLVKHLPFASTEKELAQMFRKFGSLDKIVLPPTKTMALVVFLEAAEARAAMN 514
Query: 502 SLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQG 561
LAYT++K+ PLYLEWAP + E K + KEK+ EE + ++ N D Q G
Sbjct: 515 GLAYTRYKDAPLYLEWAPRDIL-EPKALADNKEKKSAVEENDA----RRVNL---DQQVG 566
Query: 562 VPE--VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKK 616
+ E NV L++KNL+F +T++ +++H K G I SV + R
Sbjct: 567 IYSDITESNV-------------LHVKNLSFKTTDEGLKKHLTGVVKQGKILSVKIIRDW 613
Query: 617 DPKSPGQFLSMGYGFVQFYTRESLNQALKVL--QNSSLDEHQIELKRSNRNLESEATTVK 674
+ S GYGFV+F + E+ + L + + LD H + L S N SE TV
Sbjct: 614 TRRR-----SSGYGFVEFDSVETATSVYRDLPVEGNVLDGHSLILNFSE-NKRSE--TVG 665
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
S V K FK G LP K V + G+ FVE
Sbjct: 666 EGSDKVTK-----------------------FKRVG------LPLKNVRK--YAGYAFVE 694
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRT-NRYFG 782
F T EA A KAL +TH YGR LVLEWA + +++E I+K +Y G
Sbjct: 695 FGTMQEALNAKKALS-NTHFYGRHLVLEWARDDESMEAIQKSCAAKYMG 742
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
++D+ ++GR+FV L Y+ TE++L + F K+G ++EV L +DK+T +G A V +L+PE
Sbjct: 248 SDDVLDAGRLFVHGLPYSTTEEELMEHFSKFGDISEVHLVLDKDTRSCRGMAFVLYLIPE 307
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPK 416
A A LD F GR LH++P KP+
Sbjct: 308 SAKMAMDKLDKLPFQGRTLHILPAKPR 334
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T++QL+ F EKG +TDV+LK ++G+ R+FA+IG+ E +AQ A+ YFN + S +I
Sbjct: 43 VTEDQLRGIFSEKGEITDVKLKRLSDGRSRQFAYIGFRSEQKAQDAITYFNKNFKHSHQI 102
Query: 89 KV 90
V
Sbjct: 103 SV 104
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 123/340 (36%), Gaps = 81/340 (23%)
Query: 216 KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP--------------------LPLASVRT 255
K V R H ++VK+LP +K+L F+ L A R
Sbjct: 452 KGDVKNRSKHILLVKHLPFASTEKELAQMFRKFGSLDKIVLPPTKTMALVVFLEAAEARA 511
Query: 256 TFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENI 315
G+AY +KD + W + + K DN K S A + N+A N+
Sbjct: 512 AMNGLAYTRYKDAPLYLE--------WAPRDILEPKALADNKEKKS--AVEENDARRVNL 561
Query: 316 KAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFE---KYGPLAEVILPIDK 372
+ V DI ES + V+NLS+ T++ L K K G + V + D
Sbjct: 562 --------DQQVGIYSDITESNVLHVKNLSFKTTDEGLKKHLTGVVKQGKILSVKIIRDW 613
Query: 373 ETDKTKGFALVTFLMPEHATQAYQHL--DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCI 430
++ G+ V F E AT Y+ L +G V G L L + K +E +G
Sbjct: 614 TRRRSSGYGFVEFDSVETATSVYRDLPVEGNVLDGHSLILNFSENKRSETVGEG------ 667
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEF 490
K+ F +V LP + V Y VEF
Sbjct: 668 -SDKVTKFKRV------------GLPLKN-------------------VRKYAGYAFVEF 695
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKS 530
+A A +L+ T F L LEWA + EA +KS
Sbjct: 696 GTMQEALNAKKALSNTHFYGRHLVLEWARDDESMEAIQKS 735
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 137/356 (38%), Gaps = 60/356 (16%)
Query: 422 VDGKVHCCISERKLDAFNQVVEARSKRIIL------VKNLPYRTLPTDLKALFEPFGDLG 475
+DG+V ++ D VEA +L V LPY T +L F FGD+
Sbjct: 223 IDGEVKADRVDKDDDGHAMEVEADGSDDVLDAGRLFVHGLPYSTTEEELMEHFSKFGDIS 282
Query: 476 RVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA-PEGVFAEAKE 528
V + T V +L AK A + L F+ L++ A P + A+
Sbjct: 283 EVHLVLDKDTRSCRGMAFVLYLIPESAKMAMDKLDKLPFQGRTLHILPAKPRAMSAK--- 339
Query: 529 KSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNL 588
++ + + DN +P+ + E++ + E N
Sbjct: 340 --------------QDFHQMFIMDFPNRDNSSNLPKSFKKEREEQRKASEACGNTNAWNS 385
Query: 589 NFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQ 648
F + + + G S + R + + P L++G V T+E+L +A ++
Sbjct: 386 FFMRPDTILENLVRSYGVTKSELLDR--ECEDPAVRLALGETRVIMETKEALAKA--GVR 441
Query: 649 NSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKA 708
+SL+E + VK +S ++ +LV+++PF + + E+ ++F+
Sbjct: 442 VTSLEE-----------FAARKGDVKNRSKHI-------LLVKHLPFASTEKELAQMFRK 483
Query: 709 FGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
FG L + LP + V F+ EA+ AM L T L LEWA
Sbjct: 484 FGSLDKIVLPPT-------KTMALVVFLEAAEARAAMNGLAY-TRYKDAPLYLEWA 531
>gi|281427346|ref|NP_001163962.1| RNA binding motif protein 19 [Xenopus (Silurana) tropicalis]
gi|189442184|gb|AAI67335.1| Unknown (protein for MGC:135501) [Xenopus (Silurana) tropicalis]
Length = 542
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 119/203 (58%), Gaps = 17/203 (8%)
Query: 225 HTIVVKNLPAGVKKKDLKAYF---KPLPLASVRTTF---LGMAYIGFKDEKNCNKALNKN 278
+T+ ++ P V +++++ + KP+ + R T+ G ++ E+ KAL +N
Sbjct: 279 YTVKLRGAPFNVTEQNVREFLVPLKPVAIRIARNTYGNKTGYVFVDLNSEEEVQKALKRN 338
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
K + G+ + +++ DN K + +++ W+ ++ + ED++ESGR
Sbjct: 339 KDYMGGRYIEVFR---DNYTKSPSVP--------QKTQSRPWEQRDKQEELQEDVSESGR 387
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVRNL YT EDDL KLF KYGP++E+ PID T K KGFA VTFL+ EHA +AY +
Sbjct: 388 LFVRNLPYTCNEDDLEKLFSKYGPISEIHFPIDSLTKKPKGFAFVTFLITEHAVKAYAEV 447
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG +F GRMLH++P K++E N
Sbjct: 448 DGQIFQGRMLHVLPSAAKKDEVN 470
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 59/81 (72%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
I +++ + F GT+TD LKYT +GKFR+F FIG+ E++A+AAL +FN +++ +SR+
Sbjct: 13 IKEDRFRELFAAFGTLTDCSLKYTKDGKFRKFGFIGFVSEEEAKAALGHFNKSFIDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYA 109
VE C + GD KPK+WSK++
Sbjct: 73 SVEFCKSFGDPDKPKAWSKHS 93
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 21/218 (9%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
+ EP T+ ++ FN TE ++R P+A + +AR + G GY FV
Sbjct: 272 QNEPTTSYTVKLRGAPFNVTEQNVREFLVPLKPVA-IRIARN----TYGN--KTGYVFVD 324
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSN--------RNLESEATTVKRKSSNVAKQTG 685
+ E + +ALK + IE+ R N + +S + K + +
Sbjct: 325 LNSEEEVQKALK-RNKDYMGGRYIEVFRDNYTKSPSVPQKTQSRPWEQRDKQEELQEDVS 383
Query: 686 --SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
++ VRN+P+ + ++E+LF +G + + P + + +GF FV F+ A +
Sbjct: 384 ESGRLFVRNLPYTCNEDDLEKLFSKYGPISEIHFPIDSL-TKKPKGFAFVTFLITEHAVK 442
Query: 744 AMKALCQSTHLYGRRL-VLEWAEEADNVEDIRKRTNRY 780
A A GR L VL A + D V + + Y
Sbjct: 443 AY-AEVDGQIFQGRMLHVLPSAAKKDEVNESEGEASGY 479
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ ELF AFG L L K G R FGF+ F+++ EAK A+
Sbjct: 2 SRLIVKNLPNGIKEDRFRELFAAFGTLTDCSL--KYTKDGKFRKFGFIGFVSEEEAKAAL 59
>gi|297807131|ref|XP_002871449.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317286|gb|EFH47708.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 745
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 160/329 (48%), Gaps = 71/329 (21%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RSK I+LVKNLP+ + +L +F FG L ++++PP LV FL+ +A+AA N +A
Sbjct: 443 RSKHILLVKNLPFASTEKELAQMFRKFGSLDKIILPPTKTMALVVFLEPAEARAALNGMA 502
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
Y ++K+VPLYLEWAP + E K + KE++ EE + ++ N D Q G+
Sbjct: 503 YKRYKDVPLYLEWAPRDIL-EPKALADNKEEKSAVEEN----DARRVNL---DQQVGIYS 554
Query: 565 --VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKKDPK 619
E NV L++KNL+F +T++ +++H K G I SV + R +
Sbjct: 555 DIAESNV-------------LHVKNLSFKTTDEGLKKHLTGLVKQGKILSVKIIRDWKRR 601
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVL--QNSSLDEHQIELKRSNRNLESEATTVKRKS 677
S GYGFV+F + E+ + L + + LD H + L S + K
Sbjct: 602 R-----SSGYGFVEFDSVETATSVYRDLPVEGNVLDGHSLILSYS-----------ENKR 645
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
S + KI K V LP K VG + GFGFVEF T
Sbjct: 646 SETVGEGSDKI------------------------KRVGLPLKTVGK--YAGFGFVEFGT 679
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
EA A KA +TH YGR+LVLEWA +
Sbjct: 680 MQEALNAKKAFS-NTHFYGRQLVLEWAHD 707
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 58/85 (68%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
+D+ ++ R+FV L Y+ E++LT+ F K+G ++EV L +DK+T ++G A V +L+PE
Sbjct: 234 DDVLDTSRLFVHGLPYSTAEEELTEHFSKFGDISEVHLVLDKDTRNSRGMAYVLYLIPES 293
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKP 415
A +A + LD F GR LH++P KP
Sbjct: 294 AKRAMEKLDKLPFQGRTLHILPAKP 318
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 32/194 (16%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T++QL+ F KG +TDV+LK ++G R+FA+IG+ E +AQ A+ YFN +++ + RI
Sbjct: 17 VTEDQLRGIFSRKGEITDVKLKRLSDGTSRQFAYIGFRNEQEAQDAITYFNKSFIDTLRI 76
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
V L P++ K D + K KPE + +DP
Sbjct: 77 SV-----LVADPPPRTQGK--ADEKSEHAYAKGDKKIKKKPE----------ADHDPQLQ 119
Query: 149 DFLQLHGK------DVS--------KLLPLSNKDGEEKEEENEDESNNQIAHADISDMEY 194
+FL H K D+ K+ P+S +G ++ + ++ D+SDMEY
Sbjct: 120 EFLHEHKKLKFWSNDMCIPPSTGKEKVSPVSFSNGAKRSFLDPKKTRKNKVGDDVSDMEY 179
Query: 195 LKLKTKSKDTAPSD 208
LK + K K+ + SD
Sbjct: 180 LKSRIK-KNLSDSD 192
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 119/307 (38%), Gaps = 54/307 (17%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----GMAYIGFKDEKNCNKALNK 277
R H ++VKNLP +K+L F+ S+ L MA + F + ALN
Sbjct: 443 RSKHILLVKNLPFASTEKELAQMFRKF--GSLDKIILPPTKTMALVVFLEPAEARAALN- 499
Query: 278 NKSFWKGKQLNIY-KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
++ + K + +Y +++ + + AD+ S + + V DIAES
Sbjct: 500 GMAYKRYKDVPLYLEWAPRDILEPKALADNKEEKSAVEENDARRVNLDQQVGIYSDIAES 559
Query: 337 GRIFVRNLSYTVTEDDLTKLFE---KYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
+ V+NLS+ T++ L K K G + V + D + ++ G+ V F E AT
Sbjct: 560 NVLHVKNLSFKTTDEGLKKHLTGLVKQGKILSVKIIRDWKRRRSSGYGFVEFDSVETATS 619
Query: 394 AYQHL--DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
Y+ L +G V G L L + K +E +G + KR+
Sbjct: 620 VYRDLPVEGNVLDGHSLILSYSENKRSETVGEG------------------SDKIKRV-- 659
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEV 511
LP +T V Y G VEF +A A + + T F
Sbjct: 660 --GLPLKT-------------------VGKYAGFGFVEFGTMQEALNAKKAFSNTHFYGR 698
Query: 512 PLYLEWA 518
L LEWA
Sbjct: 699 QLVLEWA 705
>gi|312086145|ref|XP_003144962.1| RNA recognition domain-containing protein [Loa loa]
Length = 190
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 105/159 (66%), Gaps = 8/159 (5%)
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGS 686
MG+GF+ FY E QA+K +Q LD H + LK S+R + + T ++ + + +
Sbjct: 1 MGFGFITFYQPEDAQQAIKEMQGVLLDGHCLMLKLSHREVVPDKITARKGVVELEQGEAT 60
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK------MVGSGL--HRGFGFVEFITK 738
KIL+RNIPFQA + EV++LF FGE++ R+PKK VG+ HRGFGFV+F+T+
Sbjct: 61 KILIRNIPFQATRKEVKQLFATFGEIRSFRMPKKAGLFDSFVGASAEGHRGFGFVDFLTR 120
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRT 777
++A+RA L STH YGRRLVLEWA+ +N+E++R++
Sbjct: 121 SDARRAFSGLVHSTHFYGRRLVLEWAKPDNNLEELREKA 159
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 42/176 (23%)
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHL-------IPGKPKENEGNVDGKVHCCIS 431
GF +TF PE A QA + + G + G L L +P K +G V+
Sbjct: 2 GFGFITFYQPEDAQQAIKEMQGVLLDGHCLMLKLSHREVVPDKITARKGVVE-------- 53
Query: 432 ERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP--------YG 483
+E IL++N+P++ ++K LF FG++ +P G
Sbjct: 54 ----------LEQGEATKILIRNIPFQATRKEVKQLFATFGEIRSFRMPKKAGLFDSFVG 103
Query: 484 IT-------GLVEFLQKNQAKAAFNSLAY-TKFKEVPLYLEWA-PEGVFAEAKEKS 530
+ G V+FL ++ A+ AF+ L + T F L LEWA P+ E +EK+
Sbjct: 104 ASAEGHRGFGFVDFLTRSDARRAFSGLVHSTHFYGRRLVLEWAKPDNNLEELREKA 159
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP---------IDKETDKTKGFALVT 384
E+ +I +RN+ + T ++ +LF +G + +P + + +GF V
Sbjct: 57 GEATKILIRNIPFQATRKEVKQLFATFGEIRSFRMPKKAGLFDSFVGASAEGHRGFGFVD 116
Query: 385 FLMPEHATQAYQHL-DGTVFLGRMLHLIPGKPKEN 418
FL A +A+ L T F GR L L KP N
Sbjct: 117 FLTRSDARRAFSGLVHSTHFYGRRLVLEWAKPDNN 151
>gi|159163840|pdb|2CPH|A Chain A, Solution Structure Of The C-Terminal Rna Recognition Motif
Of Hypothetical Rna-Binding Protein Rbm19
Length = 107
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 73/91 (80%)
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
KQT SKILVRNIPFQA Q E+ ELF FGELK VRLPKKM G+G HRGFGFV+FITK +A
Sbjct: 12 KQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDA 71
Query: 742 KRAMKALCQSTHLYGRRLVLEWAEEADNVED 772
K+A ALC STHLYGRRLVLEWA+ V+
Sbjct: 72 KKAFNALCHSTHLYGRRLVLEWADSEVTVQS 102
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFL 491
QV + ++ ILV+N+P++ +++ LF FG+L V +P + G V+F+
Sbjct: 7 GQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFI 66
Query: 492 QKNQAKAAFNSLAY-TKFKEVPLYLEWA 518
K AK AFN+L + T L LEWA
Sbjct: 67 TKQDAKKAFNALCHSTHLYGRRLVLEWA 94
>gi|84996687|ref|XP_953065.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304061|emb|CAI76440.1| hypothetical protein, conserved [Theileria annulata]
Length = 716
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 165/321 (51%), Gaps = 18/321 (5%)
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKF 508
++L+KNLP+ T +L LF G + + P+ + GLV+F K +++ AF +L+Y F
Sbjct: 412 VLLIKNLPHDTEDRELIRLFSSCGKIIKFTTSPFKLLGLVQFSSKTESEKAFRTLSYKMF 471
Query: 509 KEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN 568
+ +PLYL+ P+ + N + ++ E + D+ ++++
Sbjct: 472 QNLPLYLQKVPKSLLPNL-----------NTVNSDHTDDSINELNDKVDDTDSDDQLDDK 520
Query: 569 VEEDEEREPE-PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSM 627
+E D+ E ++Y+ N++ N +E+ +HF + + K + +
Sbjct: 521 IESDDRIENRIGHVSVYVSNIDGNVSEEEFEKHFSSLKGFVISKIIKPHGSKLEEKG-GV 579
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSK 687
YGF++F + +A+K L + + I L+ S + + R K+
Sbjct: 580 RYGFIEFDNVNNAKEAIKRLCGTVIGSKIITLELSKN--KQTISKYDRNKEEGPKEENDV 637
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I+V+N+PFQA + E+ ELFK + +K VR+PK HRGFGFV F++KN+AK AM+
Sbjct: 638 IIVKNLPFQATKKELLELFKYYANVKTVRIPKS--AGNTHRGFGFVVFMSKNDAKLAMEN 695
Query: 748 LCQSTHLYGRRLVLEWAEEAD 768
L ++ HLYGRRLVL++ E ++
Sbjct: 696 L-KNVHLYGRRLVLQYVENSN 715
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 13/86 (15%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDK-------------ETDKTKGFALVT 384
R+ + NL Y VTE+ + KL + +G + ++ +P++K E+ T+G VT
Sbjct: 207 RVVIFNLPYNVTEEMIRKLVKPFGKVEQIHIPLNKRNISEITTGNNVSESAITRGMCFVT 266
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHL 410
F A + + + ++F GR++ +
Sbjct: 267 FCFESDALKFIEEKNNSIFSGRIITI 292
>gi|340517170|gb|EGR47415.1| predicted protein [Trichoderma reesei QM6a]
Length = 797
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 119/199 (59%), Gaps = 3/199 (1%)
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
V+++V E+ P +L+++NLNF +T + + F+ S V K DPK PGQ
Sbjct: 552 VKDSVLFLEKAPPAETASLFVRNLNFATTTNRLAEIFEPLDGFVSARVKTKIDPKRPGQT 611
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
LSMG+GFV+F +++ ALK + LD H + +K S+R ++ + ++ A
Sbjct: 612 LSMGFGFVEFRSKDQAQAALKAMDGYVLDGHALGVKASHRGHDAAEERRREDAAKKAAAQ 671
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+KI+++N+PFQA + ++ LF +G+L+ VR+PKK RGF F +F+T EA+ A
Sbjct: 672 RTKIVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKK--ADYTARGFAFADFVTPREAENA 729
Query: 745 MKALCQSTHLYGRRLVLEW 763
+ AL + THL GRRLVL++
Sbjct: 730 LNAL-KDTHLLGRRLVLDF 747
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 115/258 (44%), Gaps = 72/258 (27%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I+ + R+FVRNL YT TE+DL + F K+G + EV LP + + KGFALV F P A
Sbjct: 307 ISRTSRLFVRNLPYTTTEEDLYEAFGKFGTIQEVHLPTNA-SGAGKGFALVLFDNPSDAV 365
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKL----------------- 435
A+Q LDG F GR+LH+IP + K+ + G + ++ +
Sbjct: 366 NAFQALDGVTFQGRILHIIPAEAKKQSLDEFGMSKLPLKKQNMIRKKAEAATSVFNWNSM 425
Query: 436 ----DAFNQVVEAR---SKRIIL--------VKN-LPYRTLPTDLKALFE---------- 469
DA N V AR SK +L VK + T+ + KA F
Sbjct: 426 YMSQDAVNASVAARLGVSKSEVLDPTSADAAVKQAIAETTVIQETKAYFASNGVDLDAFK 485
Query: 470 --------------PFG-----------DLGRVL---VPPYGITGLVEFLQKNQAKAAFN 501
P+G + G VL +PP G +V+F Q N AKAAF
Sbjct: 486 SHKRGGTSILVKNFPYGTSMEELRKMFEECGPVLRVLMPPTGTIAIVQFAQLNHAKAAFG 545
Query: 502 SLAYTKFKEVPLYLEWAP 519
+AY + K+ L+LE AP
Sbjct: 546 KMAYRRVKDSVLFLEKAP 563
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 130/315 (41%), Gaps = 71/315 (22%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGMAYIGFKDEKNCNKALNKN 278
HKR +I+VKN P G ++L+ F+ P+ V G
Sbjct: 487 HKRGGTSILVKNFPYGTSMEELRKMFEECGPVLRVLMPPTGT------------------ 528
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI--AES 336
+ I ++++ N AK + ++ +DSV F E AE+
Sbjct: 529 --------IAIVQFAQLNHAKAA-------------FGKMAYRRVKDSVLFLEKAPPAET 567
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPL-----AEVILPID-KETDKT--KGFALVTFLMP 388
+FVRNL++ T + L ++FE PL A V ID K +T GF V F
Sbjct: 568 ASLFVRNLNFATTTNRLAEIFE---PLDGFVSARVKTKIDPKRPGQTLSMGFGFVEFRSK 624
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKL-DAFNQVVEARSK 447
+ A A + +DG V G L G + G H ER+ DA + R+K
Sbjct: 625 DQAQAALKAMDGYVLDGHAL----GVKASHRG------HDAAEERRREDAAKKAAAQRTK 674
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP---PYGITG--LVEFLQKNQAKAAFNS 502
I++KNLP++ D++ LF +G L V VP Y G +F+ +A+ A N+
Sbjct: 675 --IVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYTARGFAFADFVTPREAENALNA 732
Query: 503 LAYTKFKEVPLYLEW 517
L T L L++
Sbjct: 733 LKDTHLLGRRLVLDF 747
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 119/326 (36%), Gaps = 93/326 (28%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+N Y + ++L K+FE+ GP+ V++P T A+V F HA A+ +
Sbjct: 494 ILVKNFPYGTSMEELRKMFEECGPVLRVLMP------PTGTIAIVQFAQLNHAKAAFGKM 547
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+L L P E + V+NL +
Sbjct: 548 AYRRVKDSVLFLEKAPPAETAS-----------------------------LFVRNLNFA 578
Query: 459 TLPTDLKALFEPFGDLGRVLV--------PPYGIT---GLVEFLQKNQAKAAFNSL-AYT 506
T L +FEP V P ++ G VEF K+QA+AA ++ Y
Sbjct: 579 TTTNRLAEIFEPLDGFVSARVKTKIDPKRPGQTLSMGFGFVEFRSKDQAQAALKAMDGYV 638
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
L+ GV K +G + EE ++E+ A++ Q
Sbjct: 639 --------LDGHALGV----KASHRGHDA---------AEERRREDAAKKAAAQ------ 671
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T + IKNL F +T+ IR F G + SV V +K D + +
Sbjct: 672 -------------RTKIVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKAD------YTA 712
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSL 652
G+ F F T AL L+++ L
Sbjct: 713 RGFAFADFVTPREAENALNALKDTHL 738
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S++ VRN+P+ + ++ E F FG ++ V LP G+G +GF V F ++A A
Sbjct: 311 SRLFVRNLPYTTTEEDLYEAFGKFGTIQEVHLPTNASGAG--KGFALVLFDNPSDAVNAF 368
Query: 746 KALCQSTHLYGRRLVLEWAE 765
+AL T GR L + AE
Sbjct: 369 QALDGVT-FQGRILHIIPAE 387
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 29 ITQEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT+ + + F K +TDV+L RR ++GY A A+ YFN +Y+ S+
Sbjct: 15 ITEAEFRKHFSAKNREITDVKLIPQ-----RRIGYVGYKTPQDASGAVKYFNKSYIRMSK 69
Query: 88 IKVEKCSNLG 97
I VE +G
Sbjct: 70 ISVEPARPVG 79
>gi|339237553|ref|XP_003380331.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316976854|gb|EFV60053.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 645
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 125/218 (57%), Gaps = 19/218 (8%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTV-----------ARKKDPKSPGQFLSMG-Y 629
+ +KNL + IRR F K G + V + D K+ Q L+ Y
Sbjct: 415 VMLVKNLPAKTETAQIRRLFGKFGRLGRVVLPPSGLTAIVEFLLDSDAKAAFQNLAFKRY 474
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNV------AKQ 683
GFV++ + +A++ LQN L I+++ S R S ++ V R+SS V +
Sbjct: 475 GFVEYENDQHAQEAIRRLQNGELKGSIIQIQLSKRQTSSSSSVVDRQSSIVPYSEKTKPK 534
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ +KI+VRNIPFQA E+ +LFK FG ++ VRLPKK +G HRGFGFVEF K +A++
Sbjct: 535 SQTKIIVRNIPFQASVKEITKLFKVFGNVQSVRLPKKS-PNGQHRGFGFVEFNCKADAEK 593
Query: 744 AMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
A K L STHLYGRRLVLEWA+ +++++R +T YF
Sbjct: 594 AFKHLGVSTHLYGRRLVLEWADLEGDLQELRDKTAEYF 631
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 104/185 (56%), Gaps = 9/185 (4%)
Query: 236 VKKKDLKAYFKPLPLASVRTTFLGM-AYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSK 294
+K+K L + P+ + G+ A + + + + + +N S+ G ++ I +
Sbjct: 129 LKRKHLLVFLSPIKPCKIILVDDGLTALVHLQRKGDATAIIKRNGSYICGNKIEI---TL 185
Query: 295 DNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLT 354
D+ K S +D+ NA K + + + E+ Q A+ IAESG IF+RNL Y TE+DL
Sbjct: 186 DD--KTSAHHEDDKNAFSS--KRRQYPA-ENPKQQADLIAESGCIFLRNLPYQCTEEDLK 240
Query: 355 KLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGK 414
+ +GP+AEV +D +T K KGFALV F+ PE+A + + DG++F GR++H++ G
Sbjct: 241 NWLKTFGPIAEVNFHVDSKTGKPKGFALVKFVFPENALKVFTECDGSIFQGRVVHILAGF 300
Query: 415 PKENE 419
E+E
Sbjct: 301 ENEDE 305
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)
Query: 434 KLDAFN-QVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQ 492
+L++F+ +V RS ++LVKNLP +T ++ LF FG LGRV++PP G+T +VEFL
Sbjct: 399 QLESFSGNLVTKRSTNVMLVKNLPAKTETAQIRRLFGKFGRLGRVVLPPSGLTAIVEFLL 458
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
+ AKAAF +LA+ ++ ++E+ + EA + + E + + + + + + +
Sbjct: 459 DSDAKAAFQNLAFKRYG----FVEYENDQHAQEAIRRLQNGELKGSIIQIQLSKRQTSSS 514
Query: 553 TAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
++ D Q + V E+ +P+ T + ++N+ F ++ I + FK G + SV +
Sbjct: 515 SSVVDRQSSI------VPYSEKTKPKSQTKIIVRNIPFQASVKEITKLFKVFGNVQSVRL 568
Query: 613 ARKKDPKSP-GQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
+ KSP GQ G+GFV+F + +A K L S+
Sbjct: 569 PK----KSPNGQ--HRGFGFVEFNCKADAEKAFKHLGVST 602
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 141/317 (44%), Gaps = 37/317 (11%)
Query: 31 QEQLKAKFEEKGTVTDVQLKYTTEGK-FRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
+ +A FEE GT+TD QL++ + FR F F+G+ D A+AA + +NT+V SS+IK
Sbjct: 30 EAHFRALFEEYGTLTDCQLRFNEQNNNFRGFGFVGFQNADNAKAAKNALDNTFVKSSKIK 89
Query: 90 VEKCSNLGDTT-----KPKSWSKYAPDSSAYQKLHNIAPKQDLKPEH----TKDSKPGKK 140
VE C L + + +S SK ++ P LK +H KP K
Sbjct: 90 VEYCHPLCSSVSKNDKRVQSKSKSVASGKTVIRIQCQFP---LKRKHLLVFLSPIKPCKI 146
Query: 141 SKNDPTFSDFLQLHGKDVSKLLPLSNKD---GEEKEEENEDESNNQIAHADISDMEYLKL 197
D + + L K + + N G + E +D+++ AH + D
Sbjct: 147 ILVDDGLTALVHLQRKGDATAIIKRNGSYICGNKIEITLDDKTS---AHHE-DDKNAFSS 202
Query: 198 KTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT 256
K + P+ P +A + + I ++NLP ++DLK + K P+A V
Sbjct: 203 KRRQY------PAENPKQQADLIA-ESGCIFLRNLPYQCTEEDLKNWLKTFGPIAEVNFH 255
Query: 257 F-------LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYK-YSKDNSAKYSGAADDN 307
G A + F +N K + + S ++G+ ++I + ++ K + + +D+
Sbjct: 256 VDSKTGKPKGFALVKFVFPENALKVFTECDGSIFQGRVVHILAGFENEDETKNAKSEEDD 315
Query: 308 NNASMENIKAKHWKSQE 324
++ ++ +AK K Q+
Sbjct: 316 DDGTVTFKEAKERKQQQ 332
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 132/337 (39%), Gaps = 73/337 (21%)
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG------LVEFLQKNQAKAAFNS 502
I ++NLPY+ DLK + FG + V TG LV+F+ A F
Sbjct: 224 CIFLRNLPYQCTEEDLKNWLKTFGPIAEVNFHVDSKTGKPKGFALVKFVFPENALKVFTE 283
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
+ F+ +++ G E E+E K +EED+ G
Sbjct: 284 CDGSIFQGRVVHIL------------------------AGFENEDETKNAKSEEDDDDGT 319
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK-KCGPIASVTVARKKDPKSP 621
+E E +++ T L N+ D + + G I +V S
Sbjct: 320 VTFKEAKERKQQQAASDKRTWNSLFLGVNAVADIMAETLDVEKGAILNVHCH-----SSL 374
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
G +++G + TRE L Q + ++L+ + NL V ++S+NV
Sbjct: 375 GVRMALGESRIVRETREFLEQ------------NGVQLESFSGNL------VTKRSTNV- 415
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+LV+N+P + + +++ LF FG L V LP SGL VEF+ ++A
Sbjct: 416 ------MLVKNLPAKTETAQIRRLFGKFGRLGRVVLPP----SGLT---AIVEFLLDSDA 462
Query: 742 KRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTN 778
K A + L + R +E+ + E IR+ N
Sbjct: 463 KAAFQNLA-----FKRYGFVEYENDQHAQEAIRRLQN 494
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 20/208 (9%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLP-LASVRTTFLGM-AYIGFKDEKNCNKALN 276
V KR + ++VKNLPA + ++ F L V G+ A + F + + KA
Sbjct: 408 VTKRSTNVMLVKNLPAKTETAQIRRLFGKFGRLGRVVLPPSGLTAIVEFLLDSDA-KAAF 466
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
+N +F K+ +Y D A+ + N I+ + K Q S D S
Sbjct: 467 QNLAF---KRYGFVEYENDQHAQEAIRRLQNGELKGSIIQIQLSKRQTSSSSSVVDRQSS 523
Query: 337 -------------GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
+I VRN+ + + ++TKLF+ +G + V LP + +GF V
Sbjct: 524 IVPYSEKTKPKSQTKIIVRNIPFQASVKEITKLFKVFGNVQSVRLPKKSPNGQHRGFGFV 583
Query: 384 TFLMPEHATQAYQHLDGTVFL-GRMLHL 410
F A +A++HL + L GR L L
Sbjct: 584 EFNCKADAEKAFKHLGVSTHLYGRRLVL 611
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 117/318 (36%), Gaps = 58/318 (18%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+ R+ V+NL E LFE+YG L + L +++ + +GF V F ++A A
Sbjct: 16 TSRLIVKNLPKNFKEAHFRALFEEYGTLTDCQLRFNEQNNNFRGFGFVGFQNADNAKAAK 75
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
LD T + + P C S K D + V+++SK + K +
Sbjct: 76 NALDNTFVKSSKIKVEYCHP------------LCSSVSKND---KRVQSKSKSVASGKTV 120
Query: 456 PYRTLPTDLK-----ALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAF-NSLAYTKFK 509
LK P +LV G+T LV +K A A + +Y
Sbjct: 121 IRIQCQFPLKRKHLLVFLSPIKPCKIILVDD-GLTALVHLQRKGDATAIIKRNGSYICGN 179
Query: 510 EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
++ + L+ K +E++ ++++ AE QQ E
Sbjct: 180 KIEITLD---------------DKTSAHHEDDKNAFSSKRRQYPAENPKQQADLIAESGC 224
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
++++NL + TE+ ++ K GPIA V P G+
Sbjct: 225 -------------IFLRNLPYQCTEEDLKNWLKTFGPIAEVNFHVDSKTGKP-----KGF 266
Query: 630 GFVQFYTRESLNQALKVL 647
V+F E+ ALKV
Sbjct: 267 ALVKFVFPEN---ALKVF 281
>gi|403224006|dbj|BAM42136.1| uncharacterized protein TOT_040000506 [Theileria orientalis strain
Shintoku]
Length = 760
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 172/354 (48%), Gaps = 43/354 (12%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFK 509
+++KNLPY +L LF G + R PY + GLV++ K++ AF +L+Y +K
Sbjct: 409 LMIKNLPYNADDRELIRLFGSCGQIVRFATSPYKLLGLVQYSNKHECDRAFRTLSYKMYK 468
Query: 510 EVPLYL---------------------EWAPEGV---FAEAKEKSKGKEKEKNEEEGEEG 545
+P+YL E A EG+ + + S G E+ G+
Sbjct: 469 SLPIYLQRVAKKLLPNSATIKTNTKLIEEAREGMESDHVDGRSTSSGTRVGGTEDVGQSD 528
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPE----------PDTTLYIKNLNFNSTED 595
E + ++D + N++ D++ E E ++Y+ N++ + E+
Sbjct: 529 LEHTSRSRDDKDATNYRGDDATNLDPDDDNEDEFTKEEENNRIGHVSVYVSNIDASVDEE 588
Query: 596 SIRRHFKKCGPIASVTVAR----KKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
+ +HF + R D + YGF++F + E+ +A+K +
Sbjct: 589 ELEKHFASLKGYVISKIIRPIQGGSDESDKSKADRPRYGFIEFDSIENAKEAIKRRCGTV 648
Query: 652 LDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGE 711
+ I L+ S +N ++ + K+K ++ I+V+N+PFQA + E+ +LFK +
Sbjct: 649 VAGKLINLELS-KNKQTISKHRKKKEGGPTEENDV-IIVKNLPFQATKKELSDLFKHYAN 706
Query: 712 LKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE 765
+K VRLPK HRGFGFVEF++K++AK AM+ L ++ HLYGRRLVL++ E
Sbjct: 707 VKTVRLPKS--AGNTHRGFGFVEFMSKSDAKTAMENL-KNVHLYGRRLVLQYVE 757
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 32/190 (16%)
Query: 339 IFVRNLSYTVTEDDLTKLFE--KYGPLAEVILPI---DKETDKTKG----FALVTFLMPE 389
++V N+ +V E++L K F K ++++I PI E+DK+K + + F E
Sbjct: 576 VYVSNIDASVDEEELEKHFASLKGYVISKIIRPIQGGSDESDKSKADRPRYGFIEFDSIE 635
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
+A +A + GTV G++++L K K+ IS+ + E +
Sbjct: 636 NAKEAIKRRCGTVVAGKLINLELSKNKQT-----------ISKHRKKKEGGPTEEND--V 682
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT----GLVEFLQKNQAKAAFNSLA 504
I+VKNLP++ +L LF+ + ++ V +P G T G VEF+ K+ AK A +L
Sbjct: 683 IIVKNLPFQATKKELSDLFKHYANVKTVRLPKSAGNTHRGFGFVEFMSKSDAKTAMENL- 741
Query: 505 YTKFKEVPLY 514
K V LY
Sbjct: 742 ----KNVHLY 747
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDK---------ETDKTKGFALVTFLMP 388
R+ + NL Y+VTE+ + L + +G + ++ +P+ K E+ TKG VTF
Sbjct: 209 RVVIFNLPYSVTEEAIRSLVKPFGKVEQIHIPLLKYDYSDPSSMESRATKGMCYVTFCFE 268
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
A + + ++F GR++ + K K E
Sbjct: 269 SDAVNFVEQKNKSIFSGRIITIALAKSKHQE 299
>gi|159112569|ref|XP_001706513.1| Polyadenylate-binding protein, putative [Giardia lamblia ATCC
50803]
gi|157434610|gb|EDO78839.1| Polyadenylate-binding protein, putative [Giardia lamblia ATCC
50803]
Length = 663
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 134/528 (25%), Positives = 226/528 (42%), Gaps = 108/528 (20%)
Query: 302 GAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYG 361
A DN+ E+ +A +D + + ++ RI + L+ TED L + F YG
Sbjct: 161 AGAGDNSQVKTEDGQAATEDYGQDLIDTNDIEIDAVRIKLTGLANVTTEDHLLQHFSSYG 220
Query: 362 PLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRML------------- 408
++E ++ +DK T K G VTF +PE A +A + D T+ G+++
Sbjct: 221 EISEAVVCLDKLTHKPTGVGFVTFCLPEAAFRAKKQRD-TIINGKVVRITPARAIILPGS 279
Query: 409 ---HLIPGKPKENEG--------------------NVD------GKVHCCISERKL---- 435
+L+ G K N+ N+D V ++E L
Sbjct: 280 HKEYLVKGLDKHNKLAWNPSYMRSNTVASVAAERLNLDQTALASNAVGLAVAEAHLVEEA 339
Query: 436 -------------DAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY 482
+A RSK +IL KNLP +++ FE +G + R + P
Sbjct: 340 TAILKTHGILIVDEAVRATDTQRSKTVILCKNLPGDVDISEISQQFEQYGAVLRCIQPCP 399
Query: 483 GITGLVEFLQKNQAKAAFNSLAYTKFK--EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
G +VE A+ AFN LA+ + +VP++LE+A + + + ++KN++
Sbjct: 400 GF-AIVEMGAPQDARKAFNMLAFKRVGKLKVPMFLEFAMMQNTVDQIKDDGSQTQQKNQD 458
Query: 541 EGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRH 600
E + +P + E TT+YIKN++F++T D +
Sbjct: 459 -------------CEGTSTAPLP------------KREAPTTIYIKNISFSTTPDRVYAI 493
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQ--IE 658
K AS + GYGF +F T+ + +A+ + N +LD H+
Sbjct: 494 IKDLPKNASCRLVLHAHGHK-------GYGFAEFLTKAAAQEAIDKISNITLDGHKWSAS 546
Query: 659 LKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP 718
L R N + + ++ T K++++N+ FQA E+++L FG + R P
Sbjct: 547 LARGNDG------EIAQHAAEAGATT--KLIIKNLAFQANGKELKQLVSQFGRVVSFRAP 598
Query: 719 KKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
KK+ G RGF FV++ T+ EA+ A+ + + TH YGR LV E+ E
Sbjct: 599 KKL--DGRLRGFAFVQYATEKEAEVALNRI-KLTHFYGRHLVPEFTTE 643
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
K T+ ++ F+ G +T+++L +G RR A++G+ E A A+ N++Y+ +SR
Sbjct: 12 KATESDIQKHFQSIGPITEIRLLLKEDGTSRRVAYVGFLDEASANKAIAKLNHSYIRTSR 71
Query: 88 IKVEKC 93
I VEK
Sbjct: 72 ISVEKA 77
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 32/230 (13%)
Query: 196 KLKTKSKDTAPSDPSVPPVSKAPVHKRQY-HTIVVKNLPAGVKKKDLKAYFKPLPL-ASV 253
++K T + S AP+ KR+ TI +KN+ + A K LP AS
Sbjct: 444 QIKDDGSQTQQKNQDCEGTSTAPLPKREAPTTIYIKNISFSTTPDRVYAIIKDLPKNASC 503
Query: 254 RTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASME 313
R + G+ + KA + A D +N +++
Sbjct: 504 RLVLHAHGHKGYGFAEFLTKAAAQE------------------------AIDKISNITLD 539
Query: 314 NIKAKHWKSQEDSVQFAEDIAESG---RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPI 370
K ++ + + A+ AE+G ++ ++NL++ +L +L ++G + P
Sbjct: 540 GHKWSASLARGNDGEIAQHAAEAGATTKLIIKNLAFQANGKELKQLVSQFGRVVSFRAP- 598
Query: 371 DKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
K + +GFA V + + A A + T F GR HL+P E++G
Sbjct: 599 KKLDGRLRGFAFVQYATEKEAEVALNRIKLTHFYGR--HLVPEFTTEDQG 646
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+FV+NL+ TE D+ K F+ GP+ E+ L + KE ++ A V FL A +A
Sbjct: 3 RVFVKNLAKKATESDIQKHFQSIGPITEIRLLL-KEDGTSRRVAYVGFLDEASANKAIAK 61
Query: 398 LD 399
L+
Sbjct: 62 LN 63
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+++KNL +TE I++HF+ GPI + + K+D S +V F S N+
Sbjct: 4 VFVKNLAKKATESDIQKHFQSIGPITEIRLLLKEDGT------SRRVAYVGFLDEASANK 57
Query: 643 ALKVLQNSSLDEHQIELKRS 662
A+ L +S + +I ++++
Sbjct: 58 AIAKLNHSYIRTSRISVEKA 77
>gi|149063465|gb|EDM13788.1| RNA binding motif protein 19 (predicted) [Rattus norvegicus]
Length = 451
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 194/429 (45%), Gaps = 111/429 (25%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++ + F GT+TD LK+T EGKFR+F FIG+ E++AQAAL++F+ +++ +SRI
Sbjct: 13 MKEDRFRQLFAAFGTLTDCSLKFTKEGKFRKFGFIGFKSEEEAQAALNHFHRSFIDTSRI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPG-------KKS 141
VE C + GD +KP++WSK+A S ++ P QD P TK K +K
Sbjct: 73 TVEFCKSFGDPSKPRAWSKHAQKPSQPKQ-----PSQDSIPSDTKKDKKKKKVPSDLEKL 127
Query: 142 KNDPTFSDFLQLHGKDV----------------SKLLPL---------SNKD-GEEKEEE 175
K D F +FL +H K +K P SN D G+E EEE
Sbjct: 128 KEDAEFQEFLSIHQKRTQVATWANDALEAELPKAKAKPSSDYLNFDSDSNSDSGQESEEE 187
Query: 176 -----NEDESNNQIAHA---DISDMEYLKLKTKSKDT----------------------- 204
E+E Q A ++SDM+YLK K +
Sbjct: 188 PAGEDGEEEQGLQPKAAVQKELSDMDYLKSKMVRAEVSSEDEDKEDSEDEAVNCEEGSEA 247
Query: 205 -----APSDP-------------SVPPVSKA-----PVHKRQYHT---IVVKNLPAGVKK 238
+P+ P S+ P A P +++ T + ++ P V +
Sbjct: 248 EEEEGSPTCPAQQAGVNRGAVLGSLRPQEAAGKVEKPASQKEPTTPYTVKLRGAPFNVTE 307
Query: 239 KDLKAYFKPLPLASVRTTF------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKY 292
K++ + PL ++R G ++ E+ KAL N+ + G+ + +++
Sbjct: 308 KNVLEFLAPLKPVAIRIVRNAHGNKTGYVFVDLSSEEEVKKALKCNREYMGGRYIEVFRE 367
Query: 293 SKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+ ++A+ GA ++ +H + ED+A+SGR+FVRNLSYT +E+D
Sbjct: 368 KQASAAR--GAPKSSSAPWQGRTLGEHEEE--------EDLADSGRLFVRNLSYTSSEED 417
Query: 353 LTKLFEKYG 361
L KLF YG
Sbjct: 418 LEKLFSAYG 426
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+ A+
Sbjct: 2 SRLIVKNLPNGMKEDRFRQLFAAFGTLTDCSL--KFTKEGKFRKFGFIGFKSEEEAQAAL 59
>gi|296412291|ref|XP_002835858.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629654|emb|CAZ80015.1| unnamed protein product [Tuber melanosporum]
Length = 772
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 110/181 (60%), Gaps = 9/181 (4%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+TL+++NLNF +T + FK S V K DPK+PG LSMG+GF +F ++
Sbjct: 551 STLFVQNLNFTTTTAKLTELFKPINGFLSARVKTKPDPKNPGGTLSMGFGFAEFRSKTDG 610
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
A+ L LD H++ +K S ++ ++ K ++AK+T KI+++N+PF+A +
Sbjct: 611 MAAMAALNGYVLDGHKLSIKPSQKHTSPSSSQEK----SIAKRT--KIIIKNLPFEASKR 664
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
E+ LF A+G L+ VR+PKK G RGFGF +F T EA+ AM AL + THL GRRLV
Sbjct: 665 ELRALFSAYGTLRSVRVPKKF--GGATRGFGFADFATAREAQGAMDAL-KDTHLLGRRLV 721
Query: 761 L 761
L
Sbjct: 722 L 722
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 61/89 (68%)
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
Q I++SGR+F+RNLSY+ TE DL + F YG L EV LP+D +T +KGFA + +
Sbjct: 259 QAIHAISQSGRLFLRNLSYSSTEGDLRQYFAPYGDLEEVHLPVDNKTHLSKGFAYILYKN 318
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
P+HA QAYQ LD +F GR+LH++ PK
Sbjct: 319 PQHAVQAYQSLDRKIFQGRLLHILAASPK 347
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 29/186 (15%)
Query: 330 AEDIAESGR--IFVRNLSYTVTEDDLTKLFEKYGPLAEVIL-----PIDKETDKTKGFAL 382
A D AE+G +FV+NL++T T LT+LF+ + P + + GF
Sbjct: 542 ATDEAEAGTSTLFVQNLNFTTTTAKLTELFKPINGFLSARVKTKPDPKNPGGTLSMGFGF 601
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
F A L+G V G L + P + H S + + +
Sbjct: 602 AEFRSKTDGMAAMAALNGYVLDGHKLSIKPSQK-----------HTSPSSSQ----EKSI 646
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY--GIT---GLVEFLQKNQAK 497
R+K I++KNLP+ +L+ALF +G L V VP G T G +F +A+
Sbjct: 647 AKRTK--IIIKNLPFEASKRELRALFSAYGTLRSVRVPKKFGGATRGFGFADFATAREAQ 704
Query: 498 AAFNSL 503
A ++L
Sbjct: 705 GAMDAL 710
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFL 491
+ IL KN PY T D+ L EPFG R+L+PP G +VEF+
Sbjct: 451 KTILFKNFPYGTRTEDIHNLVEPFGKTARMLMPPAGTIAVVEFI 494
>gi|186521407|ref|NP_001119193.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332003956|gb|AED91339.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 690
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 150/277 (54%), Gaps = 35/277 (12%)
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFN 501
V+ RSK I+LVK+LP+ + +L +F FG L ++++PP LV FL+ +A+AA N
Sbjct: 415 VKNRSKHILLVKHLPFASTEKELAQMFRKFGSLDKIVLPPTKTMALVVFLEAAEARAAMN 474
Query: 502 SLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQG 561
LAYT++K+ PLYLEWAP + E K + KEK+ EE + ++ N D Q G
Sbjct: 475 GLAYTRYKDAPLYLEWAPRDIL-EPKALADNKEKKSAVEEN----DARRVNL---DQQVG 526
Query: 562 VPE--VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK---KCGPIASVTVARKK 616
+ E NV L++KNL+F +T++ +++H K G I SV K+
Sbjct: 527 IYSDITESNV-------------LHVKNLSFKTTDEGLKKHLTGVVKQGKILSV----KQ 569
Query: 617 DPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK 676
+ + S GYGFV+F + E+ + L + LD H + L S N SE TV
Sbjct: 570 IIRDWTRRRSSGYGFVEFDSVETATSVYRDLPGNVLDGHSLILNFSE-NKRSE--TVGEG 626
Query: 677 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELK 713
S V K +K+ V+N+ F+A + E+ +LF FG+++
Sbjct: 627 SDKVTKL--AKLHVKNVAFEATKKELRQLFSPFGQIQ 661
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
++D+ ++GR+FV L Y+ TE++L + F K+G ++EV L +DK+T +G A V +L+PE
Sbjct: 220 SDDVLDAGRLFVHGLPYSTTEEELMEHFSKFGDISEVHLVLDKDTRSCRGMAFVLYLIPE 279
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPK 416
A A LD F GR LH++P KP+
Sbjct: 280 SAKMAMDKLDKLPFQGRTLHILPAKPR 306
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T++QL+ F EKG +TDV+LK ++G+ R+FA+IG+ E +AQ A+ YFN + S +I
Sbjct: 15 VTEDQLRGIFSEKGEITDVKLKRLSDGRSRQFAYIGFRSEQKAQDAITYFNKNFKHSHQI 74
Query: 89 KV 90
V
Sbjct: 75 SV 76
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 184/485 (37%), Gaps = 97/485 (20%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGK-FRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y T+E+L F + G +++V L + + R AF+ Y + A+ A+D
Sbjct: 236 YSTTEEELMEHFSKFGDISEVHLVLDKDTRSCRGMAFVLYLIPESAKMAMD--------- 286
Query: 86 SRIKVEKCSNLGDT-----TKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKK 140
K++K G T KP++ S D+S+ N+ PK K E + K +
Sbjct: 287 ---KLDKLPFQGRTLHILPAKPRAMSAKQVDNSS-----NL-PKS-FKKEREEQRKASEA 336
Query: 141 SKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTK 200
N ++ F + + L L G K E + E + + + + ++TK
Sbjct: 337 CGNTNAWNSFFM---RPDTILENLVRSYGVTKSELLDRECEDPAVRLALGETRVI-METK 392
Query: 201 SKDTAPSDPSVPPVS-------KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKP------ 247
A + V S K V R H ++VK+LP +K+L F+
Sbjct: 393 E---ALAKAGVRVTSLEEFAARKGDVKNRSKHILLVKHLPFASTEKELAQMFRKFGSLDK 449
Query: 248 --------------LPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYS 293
L A R G+AY +KD + W + + K
Sbjct: 450 IVLPPTKTMALVVFLEAAEARAAMNGLAYTRYKDAPLYLE--------WAPRDILEPKAL 501
Query: 294 KDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDL 353
DN K S + N+A N+ + V DI ES + V+NLS+ T++ L
Sbjct: 502 ADNKEKKSAV--EENDARRVNL--------DQQVGIYSDITESNVLHVKNLSFKTTDEGL 551
Query: 354 TKLFE---KYGPLAEVILPI-DKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLH 409
K K G + V I D ++ G+ V F E AT Y+ L G V G L
Sbjct: 552 KKHLTGVVKQGKILSVKQIIRDWTRRRSSGYGFVEFDSVETATSVYRDLPGNVLDGHSLI 611
Query: 410 LIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFE 469
L + K +E +G D ++ + + VKN+ + +L+ LF
Sbjct: 612 LNFSENKRSETVGEGS----------DKVTKLAK------LHVKNVAFEATKKELRQLFS 655
Query: 470 PFGDL 474
PFG +
Sbjct: 656 PFGQI 660
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 136/356 (38%), Gaps = 72/356 (20%)
Query: 422 VDGKVHCCISERKLDAFNQVVEARSKRIIL------VKNLPYRTLPTDLKALFEPFGDLG 475
+DG+V ++ D VEA +L V LPY T +L F FGD+
Sbjct: 195 IDGEVKADRVDKDDDGHAMEVEADGSDDVLDAGRLFVHGLPYSTTEEELMEHFSKFGDIS 254
Query: 476 RVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA-PEGVFAEAKE 528
V + T V +L AK A + L F+ L++ A P + A+ +
Sbjct: 255 EVHLVLDKDTRSCRGMAFVLYLIPESAKMAMDKLDKLPFQGRTLHILPAKPRAMSAKQVD 314
Query: 529 KSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNL 588
S K +E E Q+ E N PDT L
Sbjct: 315 NSSNLPKSFKKEREE---------------QRKASEACGNTNAWNSFFMRPDTIL----- 354
Query: 589 NFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQ 648
E+ +R + G S + R + + P L++G V T+E+L +A ++
Sbjct: 355 -----ENLVRSY----GVTKSELLDR--ECEDPAVRLALGETRVIMETKEALAKA--GVR 401
Query: 649 NSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKA 708
+SL+E + VK +S ++ +LV+++PF + + E+ ++F+
Sbjct: 402 VTSLEE-----------FAARKGDVKNRSKHI-------LLVKHLPFASTEKELAQMFRK 443
Query: 709 FGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
FG L + LP + V F+ EA+ AM L T L LEWA
Sbjct: 444 FGSLDKIVLPPT-------KTMALVVFLEAAEARAAMNGLAY-TRYKDAPLYLEWA 491
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V++L + TE +L ++F K+G L +++LP TK ALV FL A A L
Sbjct: 423 LLVKHLPFASTEKELAQMFRKFGSLDKIVLP------PTKTMALVVFLEAAEARAAMNGL 476
Query: 399 DGTVFLGRMLHL--IPGKPKENEGNVDGKVHCCISE----RKLDAFNQV---VEARSKRI 449
T + L+L P E + D K E R+++ QV + +
Sbjct: 477 AYTRYKDAPLYLEWAPRDILEPKALADNKEKKSAVEENDARRVNLDQQVGIYSDITESNV 536
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
+ VKNL ++T LK G++L
Sbjct: 537 LHVKNLSFKTTDEGLKKHLTGVVKQGKIL 565
>gi|38567159|emb|CAE76453.1| related to MRD1 [Neurospora crassa]
Length = 790
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 3/168 (1%)
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
FK V K DPK PGQ LSMG+GFV F T++ ALKV+ LD H+I +K
Sbjct: 582 FKHLDGFVQAKVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQAALKVMDGQVLDAHKISVK 641
Query: 661 RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
S+R L++ + + A G+K++V+N+PF+ + EV LF A+G+L +R+PKK
Sbjct: 642 ASHRGLDAAEERRREDMAKKAANQGTKLVVKNLPFEVTKKEVRTLFSAYGKLVALRIPKK 701
Query: 721 MVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
S RGF F EF T EA A +L + TH+ GRRLV+++A+ D
Sbjct: 702 FNQSS--RGFAFAEFSTAKEALNAFNSL-KDTHILGRRLVIDFAQAED 746
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 176/424 (41%), Gaps = 90/424 (21%)
Query: 29 ITQEQLKAKFEEKG-TVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT+ + + F +G VTDV+L R F+GY + A A+ YFN +++ SR
Sbjct: 16 ITEAEFRKHFSAEGRQVTDVKLIPA-----RHIGFVGYKSAEDAARAVKYFNRSFIRMSR 70
Query: 88 IKVEKCSNLGDT--------------TKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTK 133
I V+ + D+ PK+ K P ++ PK + P+ K
Sbjct: 71 ISVDIAKPIADSKPQHKSPSKGSSKDADPKNAPKVLPPNTKVTA--AAVPKVEAAPDAPK 128
Query: 134 DSKPGKKSKNDPTFSDFLQLHGKDVSK------------------LLPLSNKDGEEKEEE 175
K + DP ++L + G SK +P +DGE ++E
Sbjct: 129 -RKLDVLDEADPKLQEYLDVMGAHPSKKMRNAEGLPTTVDEVLAPAVPAGLEDGES-DDE 186
Query: 176 NEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAG 235
ED + + +D E + AP S P AP P
Sbjct: 187 YEDIPSRTHNQSHTADQEMVD--------APLAASAEPSESAP--------------PVS 224
Query: 236 VKKKD---LKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKY 292
+ D L++ RT L + D ++ AL S +++
Sbjct: 225 LDATDDDWLRS----------RTNRL----LDLVDPEDAAFALRPAAS--GSAAVSVPST 268
Query: 293 SKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
S +N+A S +++ + A E ++ E ++ R+F+RNLSYTVTEDD
Sbjct: 269 SVENTA--SAKPEEHPAEDSREMAATSTHDPESAISLIE---KTSRLFLRNLSYTVTEDD 323
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
+ + F K+G L EV +P+D + +KGFA++ + P A A+Q DGTVF GR++H++P
Sbjct: 324 VREHFAKFGILVEVHVPLDSK-GHSKGFAMIRYEKPASALAAFQ-TDGTVFQGRIVHILP 381
Query: 413 GKPK 416
K
Sbjct: 382 AAAK 385
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 56/254 (22%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
++AF + R ILVKN+ T+ +L+ LFE G + RVL+PP G +V+F Q
Sbjct: 478 IEAFK--TQQRGDTTILVKNIKNTTI-EELRTLFEEHGTVLRVLMPPSGTIAIVQFAQPV 534
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPE----------------GV---------FAEAKEK 529
Q + AF AY++FK+ L+LE P+ G+ F +AK K
Sbjct: 535 QCRTAFARKAYSRFKDSVLFLEKGPKVSLPIMWLYPLMLVLPGLTDAFKHLDGFVQAKVK 594
Query: 530 SKGKEKE----------------KNEEEGE----EGEEEKKENTAEEDNQQGVPEVEENV 569
+K K+ K++ + +G+ + + + +G+ EE
Sbjct: 595 TKTDPKKPGQVLSMGFGFVAFRTKDQAQAALKVMDGQVLDAHKISVKASHRGLDAAEERR 654
Query: 570 EED-EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
ED ++ T L +KNL F T+ +R F G + ++ + +K + S G
Sbjct: 655 REDMAKKAANQGTKLVVKNLPFEVTKKEVRTLFSAYGKLVALRIPKKFNQS------SRG 708
Query: 629 YGFVQFYT-RESLN 641
+ F +F T +E+LN
Sbjct: 709 FAFAEFSTAKEALN 722
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 21/151 (13%)
Query: 258 LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
+G ++ F+ + AL G+ L+ +K S AS + A
Sbjct: 608 MGFGFVAFRTKDQAQAALK----VMDGQVLDAHKISV--------------KASHRGLDA 649
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
+ +ED + A + + ++ V+NL + VT+ ++ LF YG L + +P K +
Sbjct: 650 AEERRREDMAKKAAN--QGTKLVVKNLPFEVTKKEVRTLFSAYGKLVALRIP-KKFNQSS 706
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRML 408
+GFA F + A A+ L T LGR L
Sbjct: 707 RGFAFAEFSTAKEALNAFNSLKDTHILGRRL 737
>gi|170593753|ref|XP_001901628.1| RNA recognition motif. [Brugia malayi]
gi|158590572|gb|EDP29187.1| RNA recognition motif [Brugia malayi]
Length = 358
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 110/200 (55%), Gaps = 36/200 (18%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P TTL++KNL+F +T++ +R F+ I S T+++K+D + LSMG+GF+ FY E
Sbjct: 161 PGTTLFVKNLSFKTTDEGLRNKFESRFRIRSATISKKRDATDATKTLSMGFGFITFYQPE 220
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
QA+K +Q LD H + LK S+R + S+ KI+ R + +
Sbjct: 221 DAQQAIKDMQGVLLDGHCLMLKLSHREVVSD-----------------KIIARKGVDKLE 263
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGL--HRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
Q E + VG+ HRGFGFV+F+T+ +A+RA L STH YG
Sbjct: 264 QGEATK-----------------VGASAEGHRGFGFVDFLTRADARRAFNGLVHSTHFYG 306
Query: 757 RRLVLEWAEEADNVEDIRKR 776
RRLVLEWA+ N+E++R++
Sbjct: 307 RRLVLEWAKPDSNLEELREK 326
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 53/280 (18%)
Query: 496 AKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT-A 554
A+ AFN+LAY +F+ PL+LEWAP +F K +S ++++++ E + E+K+N
Sbjct: 7 AQKAFNTLAYARFRSQPLFLEWAPYDLFKLRKLESXDEDQKQHR---PEIQTERKDNEFI 63
Query: 555 EEDNQQGVPE----VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHF--KKCGPIA 608
+ED + + EE+VE E + E T +KN+ S ++ I+ F + +
Sbjct: 64 KEDKKLRRSKKHRLTEESVEAIELQ--EKGTKTLVKNI-ITSLQECIKLLFLVESVETVK 120
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES 668
S T+A+ D +Q S E QI NRN +S
Sbjct: 121 SGTIAKDGD-----------------------------MQQQSAVEMQIA---ENRNDDS 148
Query: 669 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--- 725
+ K K + G+ + V+N+ F+ + F++ ++ + KK +
Sbjct: 149 D-DNAKEKDDQLL--PGTTLFVKNLSFKTTDEGLRNKFESRFRIRSATISKKRDATDATK 205
Query: 726 -LHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
L GFGF+ F +A++A+K + Q L G L+L+ +
Sbjct: 206 TLSMGFGFITFYQPEDAQQAIKDM-QGVLLDGHCLMLKLS 244
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 79/199 (39%), Gaps = 43/199 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE-TDKTK----GFALVTFLMPEHATQ 393
+FV+NLS+ T++ L FE + + ++ TD TK GF +TF PE A Q
Sbjct: 165 LFVKNLSFKTTDEGLRNKFESRFRIRSATISKKRDATDATKTLSMGFGFITFYQPEDAQQ 224
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + + G + G L L +S R E S +II K
Sbjct: 225 AIKDMQGVLLDGHCLML------------------KLSHR---------EVVSDKIIARK 257
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAY-TKFKEVP 512
+ K G G G V+FL + A+ AFN L + T F
Sbjct: 258 GVDKLEQGEATKVGASAEGHRG---------FGFVDFLTRADARRAFNGLVHSTHFYGRR 308
Query: 513 LYLEWA-PEGVFAEAKEKS 530
L LEWA P+ E +EK+
Sbjct: 309 LVLEWAKPDSNLEELREKA 327
>gi|312091340|ref|XP_003146943.1| hypothetical protein LOAG_11374 [Loa loa]
Length = 620
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 118/206 (57%), Gaps = 19/206 (9%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASV---RTTFLGMAYIGFKDEKNCNKALNKNKSFW 282
++++ P VK K +K +F P+ L + R + +A++ F + + KAL +N F+
Sbjct: 176 SLIISGFPRTVKAKGIKDWFSPIKLKGIKISRGSTEAIAFVTFFQQSDVRKALRRNGQFF 235
Query: 283 KGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA-EDIAESGRIFV 341
G +L + K S +N S + ++ K++E V+ + I E+GR+FV
Sbjct: 236 GGSKLEVTKVS-------------SNRVSDDGMEDYIHKTREAEVEASVAKILETGRLFV 282
Query: 342 RNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGT 401
RNL Y +++DL LF+KYG ++++ + I K+T + KGFA+VT++ PE A A+ LDG+
Sbjct: 283 RNLPYVCSDEDLRYLFKKYGEISDLQVIISKKTGQCKGFAIVTYVFPESAVAAFSALDGS 342
Query: 402 VFLGRMLHLIPGKPKE--NEGNVDGK 425
+ GRMLH++PG+ K E + GK
Sbjct: 343 ILKGRMLHILPGEEKREVEETGITGK 368
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 84/129 (65%), Gaps = 4/129 (3%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E+L+ F GT+TD LKYT +GKFRRFAF+G+ + AQ A + +NT++ +SR+
Sbjct: 14 TEEKLRDHFGSFGTITDCSLKYTIDGKFRRFAFVGFETDGNAQKARENLHNTFMGASRLT 73
Query: 90 VEKCSNLGDTTKPKSWSKYAPDSSAYQKLH-NIAPKQDLKPEHTKDSKPGKK---SKNDP 145
VE+C GD TKP++WSKYA SSAY++LH ++ + KDS P K ++ND
Sbjct: 74 VEECKPFGDDTKPRAWSKYAKGSSAYKRLHPEEEEEKTKEIVSVKDSSPSPKKMRNENDE 133
Query: 146 TFSDFLQLH 154
F DF+Q+
Sbjct: 134 EFHDFIQVQ 142
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 73/126 (57%)
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
LD F++ RS +I++KNL + +LK +F G + ++L+PP GIT ++E
Sbjct: 449 LDVFSRPAAKRSNTVIIIKNLTTKVDIDELKRMFARHGPVKQLLMPPGGITAILEMENSI 508
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
A+ AF++LAYT+F+ PL+LEWAP +F K +SK ++K + + E E +
Sbjct: 509 DAQKAFSTLAYTRFRSQPLFLEWAPYDLFKSGKLESKDEDKSQKQHSLEVQTERNDNEFS 568
Query: 555 EEDNQQ 560
ED ++
Sbjct: 569 AEDKKK 574
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 28/160 (17%)
Query: 630 GFVQFYTRESLNQAL---------------KVLQNSSLDEHQIELKRSNRNLESEATTVK 674
FV F+ + + +AL KV N D+ + R E EA+ K
Sbjct: 214 AFVTFFQQSDVRKALRRNGQFFGGSKLEVTKVSSNRVSDDGMEDYIHKTREAEVEASVAK 273
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGF 732
+TG ++ VRN+P+ ++ LFK +GE+ V + KK +G +GF
Sbjct: 274 ------ILETG-RLFVRNLPYVCSDEDLRYLFKKYGEISDLQVIISKK---TGQCKGFAI 323
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVED 772
V ++ A A AL S L GR L + EE VE+
Sbjct: 324 VTYVFPESAVAAFSALDGSI-LKGRMLHILPGEEKREVEE 362
>gi|342182689|emb|CCC92168.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 861
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 172/378 (45%), Gaps = 62/378 (16%)
Query: 437 AFNQVVEARSKRIILVKNLPYRTL--PTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
A + +++ARS ILVKN+ L +F +G L P G L ++ +
Sbjct: 501 ARDNLLKARSNTTILVKNITLADSEDAAQLSKMFLRYGTLEATAFPSVGAFALFRYVHQQ 560
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
A+ AF L+Y FK VPL+LEWAP G + KE GE G+ KE
Sbjct: 561 DARVAFQRLSYKPFKNVPLFLEWAPIGSIST---------KEDRGACGETGDGNTKECVR 611
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT--- 611
D +++ E D TL+I N+ F ST++ + P +
Sbjct: 612 SAD-------AKDDGENDGIAAVTRVFTLFITNIPFCSTKEDFNTYLLDLCPRLAKNPDK 664
Query: 612 -VARKKDPKSPGQ-FLSMGYGFVQFYTRESLN------QALKVL---QNSSLDEHQIELK 660
+ R + G+ FL++ Y ++ LN + L + Q ++ + + K
Sbjct: 665 HIERLDYEQEKGRAFLTLRDASTMNYVQQRLNGGNFAKRTLSCVISKQTAATLQAPLLTK 724
Query: 661 RSNRNLESEATT----VKRKSSNVAKQ--------------------TGSKILVRNIPFQ 696
R+ E EA V + SS +A++ G K++V+N+PF+
Sbjct: 725 RAIVPDEGEAVNAGEDVAKISSVIARRGTTQNPLDRNKIDSDMPSGCNGLKLVVKNVPFE 784
Query: 697 AKQSEVEELFKAFGELKFVRLPKK-----MVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
A + ++ +LF A E++ VRLP+K HRGF FVEF+T+ EA+RA + L S
Sbjct: 785 ATERDIRDLFSAVSEVRSVRLPRKNNQFSSHRENNHRGFAFVEFLTEEEARRAKQTL-GS 843
Query: 752 THLYGRRLVLEWAEEADN 769
THLYGR LVL++A+ D+
Sbjct: 844 THLYGRHLVLQYAQLDDS 861
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 284 GKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA-ESGRIFVR 342
K+ +I K NS + + E + D + E+IA ES R+ +
Sbjct: 260 AKEADIAPAQKGNSEAKESLPNKKEDNVAEQLHVSSHNPPTDGGENQEEIARESHRVRIG 319
Query: 343 NLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGT 401
N+ + +E+D+ + + GP+ V +P+ ++T ++KG A V F+ + A +A G
Sbjct: 320 NIPFIASEEDVKQFASSHVGPVEAVHIPLTRDTRQSKGAAFVKFVRGDDAVRALSLCRGA 379
Query: 402 VFLGRMLHL 410
+F+GR+L +
Sbjct: 380 IFMGRLLRV 388
>gi|256092948|ref|XP_002582139.1| rna binding motif protein [Schistosoma mansoni]
gi|353228818|emb|CCD74989.1| putative rna binding motif protein [Schistosoma mansoni]
Length = 692
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 170/361 (47%), Gaps = 60/361 (16%)
Query: 451 LVKNLPYRTLPTDLKALFEPF---------------GDLGRVLVPPYGITGLVEFLQKNQ 495
L+KNLP T +++ L + + L RVLVPP GIT +VE+ Q
Sbjct: 345 LIKNLPAGTTEFEVRDLLKRYTKSSVTVDVNTPSIRSGLKRVLVPPLGITAIVEYAHSQQ 404
Query: 496 AKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAE 555
A+ + +LAY F++ L+L+W P+G A + S + E E + E+ K +
Sbjct: 405 ARLMYKALAYEPFRDSVLFLQWLPDG----ALKSSTPDDNEYEEIKSEDASIHKPKKVKH 460
Query: 556 EDNQQGVPEVEENVEEDEERE---------------------PEPDTTLYIKNLNFNSTE 594
E + V EVE+ + D+E E D + + N N NS +
Sbjct: 461 E--KSSVNEVEKIEQSDDEFELITSIPTGKHKFRDDDDDEAVAVTDHSSHHDNKN-NSCQ 517
Query: 595 DS----IRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY-----GFVQFYTRESLNQALK 645
S ++++ K I + ++ + + + MG+ F E NQ
Sbjct: 518 ISKSQRVKKYLNKKQKIVQIASSKSSELEIADKI--MGHKSKKDKFTNDIKVECTNQ--- 572
Query: 646 VLQNSSLDEHQIELKRSNRNLE-SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ N+ +Q + +N N + + +K+ S+ + ++VRNIPFQA Q E+ E
Sbjct: 573 LHSNNGNVINQCDTTTTNINKQHKDEIDIKKPISSKQLKKNKILIVRNIPFQATQKELIE 632
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
LF+ G L VRLPKK HRGF FVEF T ++AK A++ L STHL GRRL++E+A
Sbjct: 633 LFQPIGGLVNVRLPKKPTSG--HRGFAFVEFDTLDKAKIALETLGVSTHLLGRRLLMEYA 690
Query: 765 E 765
+
Sbjct: 691 Q 691
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 90/158 (56%), Gaps = 16/158 (10%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
GM + F E++ KAL K K G+ + + ++ + ++ + ++N+
Sbjct: 42 GMGLVFFWKEQDLYKALKK-KGKVGGRAVKVEEHIRK----------EDETSCVQNVDVP 90
Query: 319 HW--KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
W K+ E++V I E+GR+FVRNLSY TE L KLF +G L+++ L + +
Sbjct: 91 KWLVKTNEETVS---AILETGRLFVRNLSYACTEQHLEKLFSVHGSLSDIHLAFEPWSQV 147
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGK 414
+KGFA +TFL P A +AY+ LD T F+ R++H++PG+
Sbjct: 148 SKGFAFITFLFPSDAVKAYKSLDKTKFMNRLIHILPGQ 185
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ VRN+ + T+ +L +LF+ G L V LP K T +GFA V F + A A + L
Sbjct: 616 LIVRNIPFQATQKELIELFQPIGGLVNVRLP-KKPTSGHRGFAFVEFDTLDKAKIALETL 674
Query: 399 D-GTVFLGRML 408
T LGR L
Sbjct: 675 GVSTHLLGRRL 685
>gi|76156231|gb|AAX27453.2| SJCHGC02231 protein [Schistosoma japonicum]
Length = 216
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 113/198 (57%), Gaps = 16/198 (8%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKN 278
V K H VK L VK KD+K +FKP+ + R G+ F+++++ ++AL K
Sbjct: 2 VLKTAAHVAKVKGLSREVKIKDVKKFFKPIRIKDFRVLKNGIGIAFFRNDRDLSEALKKK 61
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHW--KSQEDSVQFAEDIAES 336
S G+ + I ++ ++N + S ++I W K+ E++V I E+
Sbjct: 62 GSVC-GRAVRIEEHVRENQETTT------EQKSAQSI----WPVKTSEETVS---AILET 107
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
GR+FVRNL Y TE++L KLF YGPL+++ L D + +KGFA VT+L P A +AY+
Sbjct: 108 GRLFVRNLPYDCTENELEKLFSPYGPLSDIHLAFDSWSQVSKGFAFVTYLFPSDAVKAYK 167
Query: 397 HLDGTVFLGRMLHLIPGK 414
LD T F+ R++H++PG+
Sbjct: 168 SLDKTKFMDRLIHILPGQ 185
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN--- 679
+ L G G F L++ALK + S+ + ++ R E++ TT ++KS+
Sbjct: 37 RVLKNGIGIAFFRNDRDLSEALK--KKGSVCGRAVRIEEHVR--ENQETTTEQKSAQSIW 92
Query: 680 ---VAKQTGSKIL------VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
+++T S IL VRN+P+ ++E+E+LF +G L + L S + +GF
Sbjct: 93 PVKTSEETVSAILETGRLFVRNLPYDCTENELEKLFSPYGPLSDIHLAFDS-WSQVSKGF 151
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFG 782
FV ++ ++A +A K+L ++ + +L E ++ RK N G
Sbjct: 152 AFVTYLFPSDAVKAYKSLDKTKFMDRLIHILPGQEHTESNHSFRKSLNNSHG 203
>gi|261330461|emb|CBH13445.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 857
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 168/695 (24%), Positives = 281/695 (40%), Gaps = 124/695 (17%)
Query: 134 DSKP-GKKSKNDPTFSDFLQLHGKDVSKLLPLSNKD---GEEKEEENEDESNNQIAHADI 189
D++P GKK + DP L+ + KL +S+ D KE N+ S+N +
Sbjct: 218 DAEPQGKKEQEDPNIE--LEKALERQKKLGEISDMDFLSSLAKESANQACSSNDASGGGG 275
Query: 190 SDMEYLKLKTKSKDT------APSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKA 243
SD ++ K ++ P +PS P R+ I + N+P ++D+K
Sbjct: 276 SDKRKGEVLEKGDESEEDQLLCPENPS--PRDDQEEVVRESRRIRLGNIPFIATEEDVKQ 333
Query: 244 YFKP---------LPLASVRTTFLGMAYIGFKDEKNCNKALNKNK-SFWKGKQLNIYKYS 293
+ +PL G A++ F ++ AL++ + + + G+ L + +
Sbjct: 334 FASSHVGPVEAVHIPLTRDTKQSKGAAFVKFARVEDAVNALSRCQGAIFMGRLLRVSAAT 393
Query: 294 KDNSAKYS--GAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTED 351
+D AK S A N+ + KAK + + + +A S +Y +
Sbjct: 394 EDPYAKRSEETAGGLAGNSEFKRQKAKDRRKEGEGTSGVAPVAWSS-------TYMNSHT 446
Query: 352 DLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLI 411
+ + ++ G A+ ++ +D + +L E
Sbjct: 447 AVETVAKRLGVTADAVVSVDARGAAVRAAIAEAYLTSE---------------------- 484
Query: 412 PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTD---LKALF 468
KE G D + + E A +++ARS ILVKN+ P D L +F
Sbjct: 485 ---IKEVLG--DEGIDFSLLE---SARENLLKARSNTTILVKNVTLGD-PADAAQLSKMF 535
Query: 469 EPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKE 528
+G L P G L ++ + A+ A L+Y FK PL+LEWAP G + A++
Sbjct: 536 LKYGTLEATAFPSAGAFALFRYVHQQDARVALQRLSYKLFKNAPLFLEWAPIGSLSTAED 595
Query: 529 KSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNL 588
+ N+ + ++ E+ N GV P TL+I N+
Sbjct: 596 GG-----DCNDRVPSHSGNGRVDDVDEDGNHVGVAA------------GTPHFTLFITNI 638
Query: 589 NFNST-EDSIRRHFKKCGPIASVT---VARKKDPKSPGQ-FLSMGYGFVQFYTRESLN-- 641
FNST ED C +A V R + + G+ FL++ Y ++ LN
Sbjct: 639 PFNSTKEDFNTFLLDSCPRLARAHDKFVERLELEQGKGRAFLTLCDASTMSYVQQRLNGR 698
Query: 642 -QALKVL------QNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGS-------- 686
A + L Q ++ R+ N + K NV + G+
Sbjct: 699 TMAGRTLACVVSKQTTAAINGASPASRATGNGGGDGEDGVAKVFNVISRRGAGQSNGNIN 758
Query: 687 ------------KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRG 729
K++V+N+PF+A + ++ +LF A E++ VRLP+K HRG
Sbjct: 759 SDSNVPPGCDGLKLVVKNVPFEATERDIRDLFTAISEVRSVRLPRKSHQFSSHRENNHRG 818
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
F FVEF+T+ EA+RA + L STHLYGR LV+++A
Sbjct: 819 FAFVEFLTEEEARRAKQTL-GSTHLYGRHLVIQYA 852
>gi|72392895|ref|XP_847248.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176082|gb|AAX70201.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70803278|gb|AAZ13182.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 857
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 167/694 (24%), Positives = 281/694 (40%), Gaps = 122/694 (17%)
Query: 134 DSKP-GKKSKNDPTFSDFLQLHGKDVSKLLPLSNKD---GEEKEEENEDESNNQIAHADI 189
D++P GKK + DP L+ + KL +S+ D KE N+ S+N +
Sbjct: 218 DAEPQGKKEQEDPNIE--LEKALERQKKLGEISDMDFLSSLAKESANQACSSNDASGGGG 275
Query: 190 SDMEYLKLKTKSKDT------APSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKA 243
SD ++ K ++ P +PS P R+ I + N+P ++D+K
Sbjct: 276 SDKRKGEVLEKGDESEEDQLLCPENPS--PRDDQEEVVRESRRIRLGNIPFIATEEDVKQ 333
Query: 244 YFKP---------LPLASVRTTFLGMAYIGFKDEKNCNKALNKNK-SFWKGKQLNIYKYS 293
+ +PL G A++ F ++ AL++ + + + G+ L + +
Sbjct: 334 FASSHVGPVEAVHIPLTRDTKQSKGAAFVKFARVEDAVNALSRCQGAIFMGRLLRVSAAT 393
Query: 294 KDNSAKYS--GAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTED 351
+D AK S A N+ + KAK + + + +A S +Y +
Sbjct: 394 EDPYAKRSEETAGGLAGNSEFKRQKAKDRRKEGEGTSGVAPVAWSS-------TYMNSHT 446
Query: 352 DLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLI 411
+ + ++ G A+ ++ +D + +L E
Sbjct: 447 AVETVAKRLGVTADAVVSVDARGAAVRAAIAEAYLTSEI--------------------- 485
Query: 412 PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR--TLPTDLKALFE 469
KE G D + + E A +++ARS ILVKN+ L +F
Sbjct: 486 ----KEVLG--DEGIDFSLLE---SARENLLKARSNTTILVKNVTLGDPAYAAQLSKMFL 536
Query: 470 PFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEK 529
+G L P G L ++ + A+ AF L+Y FK PL+LEWAP G + A++
Sbjct: 537 KYGTLEATAFPSAGAFALFRYVHQQDARVAFQRLSYKLFKNAPLFLEWAPIGSLSTAEDG 596
Query: 530 SKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLN 589
+ N+ + ++ E+ N GV P TL+I N+
Sbjct: 597 G-----DCNDRVPSHSGNGRVDDVDEDGNHVGVAA------------GTPHFTLFITNIP 639
Query: 590 FNST-EDSIRRHFKKCGPIASVT---VARKKDPKSPGQ-FLSMGYGFVQFYTRESLN--- 641
FNST ED C +A V R + + G+ FL++ Y ++ LN
Sbjct: 640 FNSTKEDFNTFLLDSCPRLARAPDKFVERLELEQGKGRAFLTLRDASTMSYVQQRLNGRT 699
Query: 642 QALKVL------QNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGS--------- 686
A + L Q ++ R+ N + + K NV + G+
Sbjct: 700 MAGRTLACVVSKQTTAAINGASPASRAAGNGDGDGEDGVAKVFNVISRRGAGQSNGNISS 759
Query: 687 -----------KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGF 730
K++V+N+PF+A + ++ +LF A E++ VRLP+K HRGF
Sbjct: 760 DSNVPPGCDGLKLVVKNVPFEATERDIRDLFTAVSEVRSVRLPRKSHQFSSHRENNHRGF 819
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
FVEF+T+ EA+RA + L STHLYGR LV+++A
Sbjct: 820 AFVEFLTEEEARRAKQTL-GSTHLYGRHLVIQYA 852
>gi|225560420|gb|EEH08701.1| RNA recognition domain-containing protein-containing protein
[Ajellomyces capsulatus G186AR]
Length = 740
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 166/346 (47%), Gaps = 46/346 (13%)
Query: 336 SGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
SGR +FVR+L + T + LT+ F + PL + +D +T ++KG+ VTF E A +A
Sbjct: 45 SGRTLFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKA 104
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI----I 450
+ +G+ F GR L + +P+ E + +G IS K QV E R + +
Sbjct: 105 LEEFNGSDFDGRKLKIEVAEPRHREIDENGGKSVSISHLK-----QVREIRKTQAQPPKL 159
Query: 451 LVKNLPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAY 505
+++NLP+ P L +LF FG + ++P G G V + A+ A N++
Sbjct: 160 IIRNLPWSIAEPDQLSSLFRSFGKVKHAVIPKRGTKHSGFGFVVLRGRKNAEKALNAVNG 219
Query: 506 TKFKEVPLYLEWAPE-GVFAEAKEKS------KGKEKEKNEEEGEEGEEEKKENTAEEDN 558
+ L ++WA E V+ E + + KGKEKE + + + E+E + +T +E N
Sbjct: 220 KEVDGRTLAVDWAVEKSVWDEFQNHTDDVIDGKGKEKEGPDNDNKLNEKEDESSTDDELN 279
Query: 559 QQ-------------GVPEVEENVEE-----DEEREPEPD-TTLYIKNLNFNSTEDSIRR 599
+ + ++E + E+ DEE E E + +T++I+NL FN+T+DS+
Sbjct: 280 GRLEDDEGEEDEDDISMTDLEGDEEDAGKKIDEEVEDERNASTVFIRNLPFNATDDSLYE 339
Query: 600 HFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK 645
HF + GP+ V + P G FV F+ E L+
Sbjct: 340 HFVQFGPLRYARVVVDAETDRP-----RGTAFVCFWKNEDAISCLR 380
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 20/203 (9%)
Query: 575 REPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQF 634
++P+ TL++++L ++T +S+ +F + P+ TV DP++ S GYGFV F
Sbjct: 41 QKPKSGRTLFVRSLPASATTESLTEYFSQSYPLKHATVVL--DPQTK---QSKGYGFVTF 95
Query: 635 YTRESLNQALKVLQNSSLDEHQIELKRSN-RNLESEATTVKRKSSNVAKQTGS------- 686
E +AL+ S D +++++ + R+ E + K S + KQ
Sbjct: 96 ADHEDAAKALEEFNGSDFDGRKLKIEVAEPRHREIDENGGKSVSISHLKQVREIRKTQAQ 155
Query: 687 --KILVRNIPFQ-AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
K+++RN+P+ A+ ++ LF++FG++K +PK+ H GFGFV + A++
Sbjct: 156 PPKLIIRNLPWSIAEPDQLSSLFRSFGKVKHAVIPKRGTK---HSGFGFVVLRGRKNAEK 212
Query: 744 AMKALCQSTHLYGRRLVLEWAEE 766
A+ A+ + GR L ++WA E
Sbjct: 213 ALNAV-NGKEVDGRTLAVDWAVE 234
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 42/225 (18%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFLGMAYIGFKDEKNCNKALN 276
T+ V++LPA + L YF PL A+V G ++ F D ++ KAL
Sbjct: 47 RTLFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALE 106
Query: 277 K-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
+ N S + G++L I + + D+N S + H K + + A+
Sbjct: 107 EFNGSDFDGRKLKI-----EVAEPRHREIDENGGKS---VSISHLKQVR---EIRKTQAQ 155
Query: 336 SGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
++ +RNL +++ E D L+ LF +G + ++P K K GF V ++A +A
Sbjct: 156 PPKLIIRNLPWSIAEPDQLSSLFRSFGKVKHAVIP--KRGTKHSGFGFVVLRGRKNAEKA 213
Query: 395 YQHLDGTVFLGRML-------------------HLIPGKPKENEG 420
++G GR L +I GK KE EG
Sbjct: 214 LNAVNGKEVDGRTLAVDWAVEKSVWDEFQNHTDDVIDGKGKEKEG 258
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
ED + +F+RNL + T+D L + F ++GPL + +D ETD+ +G A V F E
Sbjct: 315 EDERNASTVFIRNLPFNATDDSLYEHFVQFGPLRYARVVVDAETDRPRGTAFVCFWKNED 374
Query: 391 A 391
A
Sbjct: 375 A 375
>gi|157865391|ref|XP_001681403.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68124699|emb|CAJ02743.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 950
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 168/403 (41%), Gaps = 100/403 (24%)
Query: 437 AFNQVVEARSKRIILVKNLPYR--TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
A +++RS ILVKNL + +L LF FG L P G L +
Sbjct: 569 ATQNFLKSRSNTTILVKNLQLKDGNDAAELTKLFVRFGVLETSAFPSAGTCALFRYTHPQ 628
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
A+ AF L+Y FK PL+LEWAP G E +GE A
Sbjct: 629 DARIAFTRLSYKLFKTAPLFLEWAPVGALME------------------DGEGGSAPAVA 670
Query: 555 EED-------NQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPI 607
D + G PE + TL++ N+ F +TED + P
Sbjct: 671 ASDLGLTAGPSADGDPEADTGGSSATAVAKAMVYTLFLTNIPFQATEDELHAFLLDACP- 729
Query: 608 ASVTVARKKDPKSPGQFLSM----GYGFVQFYTRESLNQALKVLQNSSL---------DE 654
+AR P++ + L + G F+ + +L + L +L +
Sbjct: 730 ---RLARA--PEALIKRLVLQQEQGRAFLTVADQSTLAYCVSKLNGKTLAGRTLSCVVSK 784
Query: 655 HQIELKRSNRNLESEAT---TVKR-----------------KSSNVAKQ-TGS------- 686
H +L++ R ++ AT T +R K++ +A++ GS
Sbjct: 785 HTAQLQQQARVADTTATPQGTTRRCAGADADDDNDNESDPTKTAVLARRRAGSANPDNGG 844
Query: 687 --------------------KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG--- 723
K++V+N+PF+A + +V ELF AF E++ VR+P+K
Sbjct: 845 SGTISNSASASRVPPGSDPQKLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSS 904
Query: 724 --SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
HRGF FVEF+++ EA RA++ L ++THLYGR LVL++A
Sbjct: 905 HRENNHRGFAFVEFLSEAEAARALETL-KATHLYGRHLVLQYA 946
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 331 EDIAE-SGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDKTKGFALVTFLMP 388
E+IA S RI + N+ Y TE+ L + GP+ V +P+ K+T + KG A V F
Sbjct: 360 EEIARASHRIRLGNIPYIATEEHLKQFAASLVGPVEAVHIPLTKDTRQNKGAAFVRFSSA 419
Query: 389 EHATQAYQHLDGTVFLGRMLHL 410
E A +A Q G + +GR+L +
Sbjct: 420 EDAVRALQLCRGAILMGRLLRV 441
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET------DKTKGFALVTFLMPEHA 391
++ V+NL + TE D+ +LF + + V +P T + +GFA V FL A
Sbjct: 865 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSSHRENNHRGFAFVEFLSEAEA 924
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A + L T GR L L
Sbjct: 925 ARALETLKATHLYGRHLVL 943
>gi|255582596|ref|XP_002532080.1| RNA binding motif protein, putative [Ricinus communis]
gi|223528250|gb|EEF30303.1| RNA binding motif protein, putative [Ricinus communis]
Length = 181
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 100/156 (64%), Gaps = 11/156 (7%)
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK-QTG 685
MG+GF++F E+ LQ LD H + L+ + + + RK NV K ++
Sbjct: 1 MGFGFIEFDAVETATNVCTDLQGIVLDGHALILQLCHAKKDEQV----RK--NVEKDKSS 54
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVE++TK EA+ A+
Sbjct: 55 TKLLVRNVAFEATEKDLRQLFSPFGQIKRLRLPVKF---GNHRGFAFVEYVTKQEAQNAL 111
Query: 746 KALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+AL STHLYGR LVLE A+E +++E++R RT +F
Sbjct: 112 QAL-SSTHLYGRHLVLERAKEGESLEELRARTAAHF 146
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK 378
H K E + E S ++ VRN+++ TE DL +LF +G + + LP+ + +
Sbjct: 37 HAKKDEQVRKNVEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKRLRLPV--KFGNHR 94
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENE 419
GFA V ++ + A A Q L T GR HL+ + KE E
Sbjct: 95 GFAFVEYVTKQEAQNALQALSSTHLYGR--HLVLERAKEGE 133
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 20/147 (13%)
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAF 438
GF + F E AT L G V G L L C +++
Sbjct: 2 GFGFIEFDAVETATNVCTDLQGIVLDGHALIL----------------QLCHAKKDEQVR 45
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-PYGIT---GLVEFLQKN 494
V + +S +LV+N+ + DL+ LF PFG + R+ +P +G VE++ K
Sbjct: 46 KNVEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKRLRLPVKFGNHRGFAFVEYVTKQ 105
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEG 521
+A+ A +L+ T L LE A EG
Sbjct: 106 EAQNALQALSSTHLYGRHLVLERAKEG 132
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
+V +NVE+D+ T L ++N+ F +TE +R+ F G I R + P G
Sbjct: 43 QVRKNVEKDK-----SSTKLLVRNVAFEATEKDLRQLFSPFGQI-----KRLRLPVKFGN 92
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS 662
G+ FV++ T++ AL+ L ++ L + L+R+
Sbjct: 93 --HRGFAFVEYVTKQEAQNALQALSSTHLYGRHLVLERA 129
>gi|294460856|gb|ADE76001.1| unknown [Picea sitchensis]
Length = 181
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 98/154 (63%), Gaps = 6/154 (3%)
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSK 687
G+ F++F T E+ K LQ + LD H + L+ S+ E+++T K+ + ++ +K
Sbjct: 13 GFCFIEFDTDETARDVCKKLQGAVLDGHALSLQLSHSRKEAKSTHEKKYDKS---KSSTK 69
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I+VRN+ F+A + ++ +LF FG++K +RLPKK S HRGF F+EF+TK EA+ A A
Sbjct: 70 IIVRNVAFEATKKDLSQLFSPFGQIKSLRLPKKADQS--HRGFAFIEFVTKQEAENAFNA 127
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
L S+HLYGR LVLE A E +++ ++R R F
Sbjct: 128 L-SSSHLYGRHLVLEQAREDESLTELRARIASKF 160
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 293 SKDNSAKYSGAADDNNNASME------NIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSY 346
++D K GA D + S++ K+ H K + S S +I VRN+++
Sbjct: 25 ARDVCKKLQGAVLDGHALSLQLSHSRKEAKSTHEKKYDKS-------KSSTKIIVRNVAF 77
Query: 347 TVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQAYQHLDGTVFLG 405
T+ DL++LF +G + + LP K+ D++ +GFA + F+ + A A+ L + G
Sbjct: 78 EATKKDLSQLFSPFGQIKSLRLP--KKADQSHRGFAFIEFVTKQEAENAFNALSSSHLYG 135
Query: 406 RMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
R HL+ + +E+E + + I+ + +D N + SKR K +PY
Sbjct: 136 R--HLVLEQAREDESLTELRAR--IASKFVDD-NDITLGSSKR---RKGMPY 179
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF + F E A + L G V G L L ++ + E+K D
Sbjct: 12 KGFCFIEFDTDETARDVCKKLQGAVLDGHALSLQLSHSRKEAKST--------HEKKYD- 62
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-----PYGITGLVEFLQ 492
+++S I+V+N+ + DL LF PFG + + +P + +EF+
Sbjct: 63 -----KSKSSTKIIVRNVAFEATKKDLSQLFSPFGQIKSLRLPKKADQSHRGFAFIEFVT 117
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPE 520
K +A+ AFN+L+ + L LE A E
Sbjct: 118 KQEAENAFNALSSSHLYGRHLVLEQARE 145
>gi|401416828|ref|XP_003872908.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489134|emb|CBZ24386.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 819
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 166/410 (40%), Gaps = 114/410 (27%)
Query: 437 AFNQVVEARSKRIILVKNLPYR--TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
A +++RS ILVKNL + +L LF FG L P G L +
Sbjct: 438 ATQNFLKSRSNTTILVKNLQLKDGNDAAELTKLFVRFGVLETSAFPSAGTFALFRYTHPQ 497
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
A+ AF L+Y FK PL+LEWAP G E +GE G A
Sbjct: 498 DARIAFTRLSYKLFKTAPLFLEWAPVGALME---------------DGEGGSASAV--AA 540
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDT--------------TLYIKNLNFNSTEDSIRRH 600
+ G P + + P+ DT TL++ N+ F +TED +
Sbjct: 541 SDLGLVGGPSADND--------PDADTGDSAAAVVAKAMVYTLFLTNIPFQTTEDELHAF 592
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSM----GYGFVQFYTRESLNQALKVLQNSSL---- 652
P +AR P++ + L + G F+ + +L + L +L
Sbjct: 593 LLDACP----RLARA--PETLIKRLVLQQEQGRAFLTVADQSTLAYCVAKLNGKTLAGRT 646
Query: 653 -----DEHQIELKRSNRNLESEAT----------------------------TVKRKSSN 679
+H +L++ R ++ A +R++
Sbjct: 647 LSCVVSKHTAQLQQQARVADTTAAPQGTTRRFAGADADGGNHDEFDPTKTAVIARRRAGG 706
Query: 680 VAKQTGS--------------------KILVRNIPFQAKQSEVEELFKAFGELKFVRLPK 719
V+ G K++V+N+PF+A + +V ELF AF E++ VR+P+
Sbjct: 707 VSPDNGGSGAISNSASVSKVPPGSDPQKLIVKNLPFEATEKDVRELFSAFSEIRTVRVPR 766
Query: 720 KMVG-----SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
K HRGF FVEF+++ EA RA++ L ++THLYGR LVL++A
Sbjct: 767 KSHAFSSHRENNHRGFAFVEFLSEAEAARALETL-KATHLYGRHLVLQYA 815
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 331 EDIAE-SGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDKTKGFALVTFLMP 388
E+IA S RI + N+ Y TE+ L + GP+ V +P+ K+T + KG A + F
Sbjct: 229 EEIARASHRIRLANIPYIATEEHLKQFAASLVGPVESVHIPLTKDTRQNKGAAFMRFSSG 288
Query: 389 EHATQAYQHLDGTVFLGRMLHL 410
E A +A Q G + +GR+L +
Sbjct: 289 EDAVRALQLCRGAILMGRLLRV 310
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET------DKTKGFALVTFLMPEHA 391
++ V+NL + TE D+ +LF + + V +P + +GFA V FL A
Sbjct: 734 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHAFSSHRENNHRGFAFVEFLSEAEA 793
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A + L T GR L L
Sbjct: 794 ARALETLKATHLYGRHLVL 812
>gi|324531966|gb|ADY49202.1| RNA-binding protein 19, partial [Ascaris suum]
Length = 174
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 82/130 (63%), Gaps = 3/130 (2%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+ +L+ FE+ G +TD LKYT +GKFRRFAF+G+ E A+ AL NNT++ +SRI+
Sbjct: 14 TEAKLRVVFEKYGQLTDCSLKYTKDGKFRRFAFVGFGDEHNAKRALSDLNNTFINASRIQ 73
Query: 90 VEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSK---NDPT 146
VE+C GD TKP++WSKYA DSSAY++ H + K D+ KK K D
Sbjct: 74 VEECKPFGDETKPRAWSKYAKDSSAYKRAHPEEANEKSKKIKFDDTPMNKKKKLEHRDEK 133
Query: 147 FSDFLQLHGK 156
F +FLQ+ K
Sbjct: 134 FIEFLQVQNK 143
>gi|221483682|gb|EEE21994.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 997
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 24/224 (10%)
Query: 562 VPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKC-GPIASVTVARKKDPKS 620
+ + +V D E E + +L++KN+NF ++E ++ F C G ++ + +KK S
Sbjct: 768 IETIGNDVRGDFEEEVQ-GVSLFVKNVNFCTSEATLNDVFAGCPGLRRTILMVKKKAVSS 826
Query: 621 PGQ----------FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL---KRSNRNLE 667
LSMGY FV+F + E+ A K +Q +D+H +++ K + R
Sbjct: 827 SAAEATENGDAQTLLSMGYAFVEFDSAENALAACKRMQGVVVDDHVLQISISKAAGRRPR 886
Query: 668 SE-ATTVKRKSSNVA-----KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM 721
E T VK + + + +K+LVRN+ FQA S++ LF A+G + V +P++
Sbjct: 887 GEPGTGVKVRGGASSGSGKSQAQSNKVLVRNLAFQASASDLRGLFSAYGNVTRVCIPRQH 946
Query: 722 VGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE 765
G RGFGFV+F TK EA+ A++AL S HLYGRRLVLE A+
Sbjct: 947 --EGRSRGFGFVDFATKQEAQNAVEALTGS-HLYGRRLVLEPAQ 987
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Query: 325 DSVQFAED-------IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
DS + AE+ + GR+ ++NL + T D+L L E+YG +AE L +D+ET +
Sbjct: 305 DSTEMAENEAADLALLGSHGRLLIQNLPFATTVDELRALCEEYGEVAETHLVVDEETQRP 364
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKP 415
+GF V+F+ PEHA + L+G++F GR+L P +P
Sbjct: 365 RGFGFVSFVFPEHAVASLPRLNGSIFQGRILRAFPARP 402
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 444 ARSKRIILVKNLPYRTL-PTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNS 502
ARS+ ++VK+LP + +L LFE G L R L+ P +V++ ++ A+ AF
Sbjct: 579 ARSRDTLIVKHLPTAHVNEAELLRLFERVGPLARFLLAPSKTVAIVQYEREKDAEVAFRH 638
Query: 503 LAYTKFKEVPLYLEWAPEGVF 523
LAY ++K VPL+LE AP VF
Sbjct: 639 LAYRQYKNVPLFLEKAPVNVF 659
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A+S ++ VRNL++ + DL LF YG + V +P E +++GF V F + A
Sbjct: 908 AQSNKVLVRNLAFQASASDLRGLFSAYGNVTRVCIPRQHE-GRSRGFGFVDFATKQEAQN 966
Query: 394 AYQHLDGTVFLGRMLHLIPGK 414
A + L G+ GR L L P +
Sbjct: 967 AVEALTGSHLYGRRLVLEPAQ 987
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 38/262 (14%)
Query: 285 KQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQ--FAEDIAESGRIFVR 342
+Q + +S D+S SG A + S++ K K ++ + V+ F E++ + +FV+
Sbjct: 735 RQKPLGSHSLDSS--ESGPAKQDPPTSLKKRKVKEIETIGNDVRGDFEEEV-QGVSLFVK 791
Query: 343 NLSYTVTEDDLTKLFEKYGPLAEVILPI----------------DKETDKTKGFALVTFL 386
N+++ +E L +F L IL + D +T + G+A V F
Sbjct: 792 NVNFCTSEATLNDVFAGCPGLRRTILMVKKKAVSSSAAEATENGDAQTLLSMGYAFVEFD 851
Query: 387 MPEHATQAYQHLDGTVFLGRMLHL----IPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
E+A A + + G V +L + G+ E KV S
Sbjct: 852 SAENALAACKRMQGVVVDDHVLQISISKAAGRRPRGEPGTGVKVRGGASSGS-----GKS 906
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQA 496
+A+S ++ LV+NL ++ +DL+ LF +G++ RV +P G G V+F K +A
Sbjct: 907 QAQSNKV-LVRNLAFQASASDLRGLFSAYGNVTRVCIPRQHEGRSRGF-GFVDFATKQEA 964
Query: 497 KAAFNSLAYTKFKEVPLYLEWA 518
+ A +L + L LE A
Sbjct: 965 QNAVEALTGSHLYGRRLVLEPA 986
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 29 ITQEQLKAKFEE-KGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT +LK K G +TDV L GK R+ AF+G+ ++QA D+F +T++ + +
Sbjct: 62 ITTAELKQKLSSLGGEITDVCLLRNERGKSRQCAFVGFKTQEQAMNVKDHFQSTFIHTRK 121
Query: 88 IKV 90
+++
Sbjct: 122 VEI 124
>gi|237841019|ref|XP_002369807.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|211967471|gb|EEB02667.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
Length = 997
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 114/205 (55%), Gaps = 23/205 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKC-GPIASVTVARKKDPKSPGQ----------FLSMGY 629
+L++KN+NF ++E ++ F C G ++ + +KK S LSMGY
Sbjct: 786 VSLFVKNVNFCTSEATLNDVFAGCPGLRRTILMVKKKAVSSSAAEATENGDAQTLLSMGY 845
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIEL---KRSNRNLESE-ATTVKRKSSNVA---- 681
FV+F + E+ A K +Q +D+H +++ K + R E T VK + +
Sbjct: 846 AFVEFDSAENALAACKRMQGVVVDDHVLQISISKAAGRRPRGEPGTGVKVRGGASSGSGK 905
Query: 682 -KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 740
+ +K+LVRN+ FQA S++ LF A+G + V +P++ G RGFGFV+F TK E
Sbjct: 906 SQAQSNKVLVRNLAFQASASDLRGLFSAYGNVTRVCIPRQH--EGRSRGFGFVDFATKQE 963
Query: 741 AKRAMKALCQSTHLYGRRLVLEWAE 765
A+ A++AL S HLYGRRLVLE A+
Sbjct: 964 AQNAVEALTGS-HLYGRRLVLEPAQ 987
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Query: 325 DSVQFAED-------IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
DS + AE+ + GR+ ++NL + T D+L L E+YG +AE L +D+ET +
Sbjct: 305 DSTEMAENEAADLALLGSHGRLLIQNLPFATTVDELRALCEEYGEVAETHLVVDEETQRP 364
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKP 415
+GF V+F+ PEHA + L+G++F GR+L P +P
Sbjct: 365 RGFGFVSFVFPEHAVASLPRLNGSIFQGRILRAFPARP 402
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 444 ARSKRIILVKNLPYRTL-PTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNS 502
ARS+ ++VK+LP + +L LFE G L R L+ P +V++ ++ A+ AF
Sbjct: 579 ARSRDTLIVKHLPTAHVNEAELLRLFERVGPLARFLLAPSKTVAIVQYEREKDAEVAFRH 638
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
LAY ++K VPL+LE AP VF E +E+ + K EE
Sbjct: 639 LAYRQYKNVPLFLEKAPVNVFVEREEEIETARKGAVEE 676
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A+S ++ VRNL++ + DL LF YG + V +P E +++GF V F + A
Sbjct: 908 AQSNKVLVRNLAFQASASDLRGLFSAYGNVTRVCIPRQHE-GRSRGFGFVDFATKQEAQN 966
Query: 394 AYQHLDGTVFLGRMLHLIPGK 414
A + L G+ GR L L P +
Sbjct: 967 AVEALTGSHLYGRRLVLEPAQ 987
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 38/262 (14%)
Query: 285 KQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQ--FAEDIAESGRIFVR 342
+Q + +S D+S SG A + S++ K K ++ + V+ F E++ + +FV+
Sbjct: 735 RQKPLGSHSLDSS--ESGPAKQDPPTSLKKRKVKEIETIGNDVRGDFEEEV-QGVSLFVK 791
Query: 343 NLSYTVTEDDLTKLFEKYGPLAEVILPI----------------DKETDKTKGFALVTFL 386
N+++ +E L +F L IL + D +T + G+A V F
Sbjct: 792 NVNFCTSEATLNDVFAGCPGLRRTILMVKKKAVSSSAAEATENGDAQTLLSMGYAFVEFD 851
Query: 387 MPEHATQAYQHLDGTVFLGRMLHL----IPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
E+A A + + G V +L + G+ E KV + +
Sbjct: 852 SAENALAACKRMQGVVVDDHVLQISISKAAGRRPRGEPGTGVKVR-----GGASSGSGKS 906
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQA 496
+A+S ++ LV+NL ++ +DL+ LF +G++ RV +P G G V+F K +A
Sbjct: 907 QAQSNKV-LVRNLAFQASASDLRGLFSAYGNVTRVCIPRQHEGRSRGF-GFVDFATKQEA 964
Query: 497 KAAFNSLAYTKFKEVPLYLEWA 518
+ A +L + L LE A
Sbjct: 965 QNAVEALTGSHLYGRRLVLEPA 986
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 29 ITQEQLKAKFEE-KGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
IT +LK K G +TDV L GK R+ AF+G+ ++QA D+F +T++ + +
Sbjct: 62 ITTAELKQKLSSLGGEITDVCLLRNERGKSRQCAFVGFKTQEQAMNVKDHFQSTFIHTRK 121
Query: 88 IKV 90
+++
Sbjct: 122 VEI 124
>gi|341898154|gb|EGT54089.1| hypothetical protein CAEBREN_31614 [Caenorhabditis brenneri]
Length = 820
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 147/325 (45%), Gaps = 53/325 (16%)
Query: 46 DVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR-IKVEKCSNLGDTTKPKS 104
D YT EGKFR FAF G+ E A A+ N T+ S R VE+C GD KP++
Sbjct: 525 DXXXXYTKEGKFRGFAFAGFLDEGSAANAISKSNQTFFNSKRKTVVEECRPFGDANKPRA 584
Query: 105 WSKYAPDSSAYQKLHNIAPKQ-DLKP--EHTKDSKPGKKSKNDPTFSDFLQLHGKDVSKL 161
WSKYA DSSAY++ H P Q D KP + D KK K D FL+ G V K
Sbjct: 585 WSKYAKDSSAYKRAH---PDQVDEKPGKSGSSDEPTAKKQKKDEKLDQFLEAKGVAVEKE 641
Query: 162 LPLS-NKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPVH 220
+ LS +K E K+ AD+ ME ++ DT+ S
Sbjct: 642 VRLSKDKSAEAKK-----------LMADL--MEGIE-----GDTSLS------------- 670
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASV---RTTFLGMAYIGFKDEKNCNKALNK 277
++ LP+ K K++K + P+ + ++ R + A++ F + +AL K
Sbjct: 671 ------LIFSGLPSSAKGKNIKEWLNPIRVKAMKISRNEDVAAAFVTFNRPPDVRRALQK 724
Query: 278 NKSFWKGKQLNIYKYSKDN-----SAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+ F G ++ I K + N + + + ++E A+ +++ E
Sbjct: 725 DGQFLGGFKIGIEKVRQVNDYFSVNIDFKIETPEPTVEAVEEHGAELQSREKEEETVREK 784
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLF 357
I E+GR+F+RNL Y EDDL LF
Sbjct: 785 ILETGRLFIRNLPYATKEDDLQFLF 809
>gi|444723045|gb|ELW63710.1| putative RNA-binding protein 19 [Tupaia chinensis]
Length = 143
Score = 112 bits (279), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/73 (65%), Positives = 59/73 (80%)
Query: 709 FGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
FGELK VRLPKKM G+G HRGFGFV+F+TK +AKRA ALC STHLYGRRLVLEWA+
Sbjct: 36 FGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADAEV 95
Query: 769 NVEDIRKRTNRYF 781
++ +R++T +F
Sbjct: 96 TLQALRRKTAEHF 108
>gi|281201992|gb|EFA76199.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 874
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 65/84 (77%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
ED+ E+GR+F+RNL+YTVTEDDL KLFE +G L+E+ +PID+ + K+KG A + F++PE+
Sbjct: 320 EDVGETGRLFIRNLAYTVTEDDLKKLFEPFGKLSEIYIPIDRNSKKSKGIAFLLFMIPEN 379
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGK 414
A +A +DG GR++H++P K
Sbjct: 380 AMRAMTEMDGKAIQGRLVHILPAK 403
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 58/80 (72%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
RSK +ILVKN+P++T T+L+ +F FG+L RVL+ P L+EF ++AK AF +LA
Sbjct: 512 RSKTVILVKNIPHKTTQTELETMFSRFGELARVLLTPARTLALLEFYHVSEAKLAFQNLA 571
Query: 505 YTKFKEVPLYLEWAPEGVFA 524
YTKF VPLYLEWAP GVF
Sbjct: 572 YTKFHHVPLYLEWAPIGVFT 591
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+T+++LK FE GTVTD ++ + +GK R F FIG+ E A+ AL NNTY+ +S+I
Sbjct: 14 LTEKRLKDHFERFGTVTDCKIMKSRDGKSRMFGFIGFSSESAAKQAL-VLNNTYLDTSKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTK 133
VEK + ++P WSKY+ SSA+ K + ++ L + K
Sbjct: 73 IVEKAVDSESVSRP--WSKYSAGSSAFNKAQELEKQKQLTEQQKK 115
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 666 LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 725
LE E +++ +++ + ILV+NIP + Q+E+E +F FGEL V L
Sbjct: 495 LEEEGVVIEKIGGKGIERSKTVILVKNIPHKTTQTELETMFSRFGELARVLLTPA----- 549
Query: 726 LHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
R +EF +EAK A + L T + L LEWA
Sbjct: 550 --RTLALLEFYHVSEAKLAFQNLAY-TKFHHVPLYLEWA 585
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +I V+N+ + + ++ KLF YG L V +P K T +GF V +L + A A
Sbjct: 776 STKISVKNIPFEASPAEVRKLFATYGELQSVRIP-KKPTGGHRGFGFVQYLTEQEAKNAM 834
Query: 396 QHLDGTVFLGRMLHL 410
L + GR L L
Sbjct: 835 DALRNSHLYGRHLVL 849
>gi|358340327|dbj|GAA48246.1| multiple RNA-binding domain-containing protein 1, partial
[Clonorchis sinensis]
Length = 518
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 140/311 (45%), Gaps = 33/311 (10%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGR----------------VLVPPYGITGLVEFLQK 493
L+KNLP T +++ L + R V+VPP GIT +VEF
Sbjct: 152 FLIKNLPAGTTAVEVRELLNRYSKSARPEDSQTLTTSRIRPKSVIVPPLGITAIVEFSLP 211
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
QA+ + LAY +++ LYL+W PEG K++S + +EEEG + ++K
Sbjct: 212 QQARLMYRYLAYEPYRDSILYLQWLPEGAL---KDRSDAAAEPTDEEEGRSEKSKRKRKR 268
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
A E P N + E E T+L +++ + H ++C S
Sbjct: 269 AHETPLD--PTATGNEPRTTQDEFELITSLPLEHTGAETNSG----HRQQCPRTTSDESM 322
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKR--SNRNLESEAT 671
P+ P + + Y ++ L Q L+ + E +L+ S+R E+E
Sbjct: 323 DTDYPEEPAKPKARKYQ----NKKDRLKQQLQASDGAPPTEASPDLEHPSSSREKETEQE 378
Query: 672 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
+ K + T +L RN+ FQA Q E+ ELF G L VRLP+K SG HRGF
Sbjct: 379 KKRNKDKKPPEPTKPVLLCRNVSFQATQKELTELFSPVGGLIRVRLPQKP--SGGHRGFA 436
Query: 732 FVEFITKNEAK 742
F+EF T ++AK
Sbjct: 437 FLEFATIDQAK 447
>gi|159163365|pdb|1WHW|A Chain A, Solution Structure Of The N-Terminal Rna Binding Domain
From Hypothetical Protein Bab23448
Length = 99
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 58/75 (77%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+FVRNLSYT +E+DL KLF YGPL+E+ PID T K KGFA VTF+ PEHA +AY
Sbjct: 10 RLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69
Query: 398 LDGTVFLGRMLHLIP 412
+DG VF GRMLH++P
Sbjct: 70 VDGQVFQGRMLHVLP 84
>gi|19112906|ref|NP_596114.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|74676076|sp|O74400.1|YOCE_SCHPO RecName: Full=Uncharacterized RNA-binding protein C4F6.14
gi|3560147|emb|CAA20734.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 674
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 153/346 (44%), Gaps = 53/346 (15%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVRNL++ +DDLT F GP+ ++ + ET + +G+ VTF M E A +A + L
Sbjct: 7 LFVRNLAFQTKQDDLTNFFSDVGPIKHAVVVTNPETGENRGYGFVTFSMLEDAQRAAKEL 66
Query: 399 DGTVFLGRMLHLIPGKP-KENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
GR+L L P K +E + D A + + ++ ++++NLP+
Sbjct: 67 KNKKLHGRILRLDFATPRKRSEVDTDQN----------KAVKKTIRQDNRPRLIIRNLPW 116
Query: 458 RT-LPTDLKALFEPFGDLGRVLVPPYGITGLVEFL-----QKNQAKAAFNSLAYTKFKEV 511
P L+ F FG + + +P G + F + A+ A NSL T+
Sbjct: 117 SIKKPQHLEPHFSKFGKVREIKIPTKGGGRMCGFAFVWMKDRKAAEEAMNSLNGTEIDGR 176
Query: 512 PLYLEWA-------------------------PEG---VFAEAKEKSKGKEKEKNEEEGE 543
P+ ++WA EG V +A S+ +E+ EG+
Sbjct: 177 PIAVDWAVSKDAFEATTLKDASSEEENKEFVSDEGHSIVTEDASADSESEEEVDGHSEGK 236
Query: 544 E--GEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEP-DTTLYIKNLNFNSTEDSIRRH 600
E GE E++ + ++ G ++N E R+ E + T++++NL F TE + H
Sbjct: 237 ELAGESEEEGSNVDDVEDSGDSSSDKNSINHEIRDNEGLEDTVFVRNLLFECTEQELYNH 296
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKV 646
F++ GP+A + K P S+G GF++F + L++
Sbjct: 297 FRQFGPLAYAKLV-----KDPATDRSLGRGFIKFRYEKDCQNCLEM 337
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
++TL+++NL F + +D + F GPI V +P + GYGFV F E
Sbjct: 4 NSTLFVRNLAFQTKQDDLTNFFSDVGPIKHAVVV-----TNPETGENRGYGFVTFSMLED 58
Query: 640 LNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS--SNVAKQTGSKILVRNIPFQA 697
+A K L+N L + L + SE T + K+ + + ++++RN+P+
Sbjct: 59 AQRAAKELKNKKLHGRILRLDFATPRKRSEVDTDQNKAVKKTIRQDNRPRLIIRNLPWSI 118
Query: 698 KQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
K+ + +E F FG+++ +++P K G G GF FV + A+ AM +L T + G
Sbjct: 119 KKPQHLEPHFSKFGKVREIKIPTK--GGGRMCGFAFVWMKDRKAAEEAMNSL-NGTEIDG 175
Query: 757 RRLVLEWAEEADNVE 771
R + ++WA D E
Sbjct: 176 RPIAVDWAVSKDAFE 190
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELK---FVRLPKKMVGSGLHRGFGFVEFITKNE 740
+ S + VRN+ FQ KQ ++ F G +K V P+ +G +RG+GFV F +
Sbjct: 3 SNSTLFVRNLAFQTKQDDLTNFFSDVGPIKHAVVVTNPE----TGENRGYGFVTFSMLED 58
Query: 741 AKRAMKALCQSTHLYGRRLVLEWA 764
A+RA K L ++ L+GR L L++A
Sbjct: 59 AQRAAKEL-KNKKLHGRILRLDFA 81
>gi|396465644|ref|XP_003837430.1| similar to ribosome biogenesis (Nop4) [Leptosphaeria maculans JN3]
gi|312213988|emb|CBX93990.1| similar to ribosome biogenesis (Nop4) [Leptosphaeria maculans JN3]
Length = 759
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 173/355 (48%), Gaps = 48/355 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR L+ TVT +DLT F + P+ ++ +DKET ++KG+ VTF E A +A + L
Sbjct: 51 LFVRGLAPTVTTEDLTNHFSESYPIKNALVVLDKETRESKGYGFVTFADVEDAQRAKEEL 110
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ + G+ + + + ++ EG + K K + Q+ +A++ ++I ++NLP+
Sbjct: 111 NNSELKGKKIKVDVAEARQREG--EEKRPKAGDRAKAERAQQIKDAQTPKLI-IRNLPWT 167
Query: 459 T-LPTDLKALFEPFGDLGRVLVP--PYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVP 512
P DL+ LF FG + V +P P G G V + A+ A L + + P
Sbjct: 168 VKTPEDLQKLFRSFGKVNFVNLPKKPNGELRGFGFVSLRGRKNAENAIRELNGKEIDDRP 227
Query: 513 LYLEWAPEGVFAEAKEKS--KGKEKEKN-EEEGEEGEEEKKENTAEEDNQ---------- 559
+ ++WA + + +KS +G+E + E+E +E E+ + NT++ D+
Sbjct: 228 IAVDWAVDRDTWQTLQKSEQEGEETQSGTEKEDKEMEDAESSNTSDGDDNDDSEAEADDS 287
Query: 560 ------------QGVPEVEE----NVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK 603
+ + E +E +++E+ ++ + T++I+NL F ++ ++ HF++
Sbjct: 288 EDEDMDDSNTDYEDISEDDEDGGFDLDEENDKPKREEYTIFIRNLPFTVDDERLKEHFQQ 347
Query: 604 CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK-----VLQNSSLD 653
G + V ++ + P G GFV F+T E + LK LQ +LD
Sbjct: 348 FGGVRFARVVIDRETERP-----KGTGFVSFFTEEDMINCLKGVPRVKLQKKNLD 397
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+++ L T + + HF + PI + V K+ + S GYGFV F E +
Sbjct: 51 LFVRGLAPTVTTEDLTNHFSESYPIKNALVVLDKETRE-----SKGYGFVTFADVEDAQR 105
Query: 643 ALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGS----KILVRNIP 694
A + L NS L +I++ R E R + A+Q K+++RN+P
Sbjct: 106 AKEELNNSELKGKKIKVDVAEARQREGEEKRPKAGDRAKAERAQQIKDAQTPKLIIRNLP 165
Query: 695 FQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTH 753
+ K E +++LF++FG++ FV LPKK +G RGFGFV + A+ A++ L
Sbjct: 166 WTVKTPEDLQKLFRSFGKVNFVNLPKKP--NGELRGFGFVSLRGRKNAENAIREL-NGKE 222
Query: 754 LYGRRLVLEWAEEADNVEDIRK 775
+ R + ++WA + D + ++K
Sbjct: 223 IDDRPIAVDWAVDRDTWQTLQK 244
>gi|147769692|emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
Length = 555
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 179/442 (40%), Gaps = 86/442 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L V+E +L +F GPL V L D + K+ +A V F P A++A L
Sbjct: 31 LYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFYPSDASKALACL 90
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T +G+ + ++ H RK N + VKNL
Sbjct: 91 NHTKLMGKPMRIMWS-------------HRDPLPRKTGLAN----------LFVKNLDPS 127
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYG----ITGLVEFLQKNQAKAAFNSLAYTKFKEVPLY 514
L+ +F FG++ V G V+F + A AA N+L T L+
Sbjct: 128 INSASLQDIFCKFGNILSCKVAEENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLF 187
Query: 515 LEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEE 574
V + + E E
Sbjct: 188 -----------------------------------------------VSKFVKKCERKEA 200
Query: 575 REPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQF 634
E T +Y+KNL + TED IR F + G + +V + + + KS G+GFV F
Sbjct: 201 SEETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKS------RGFGFVNF 254
Query: 635 YTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK---SSNVAKQTGSKILVR 691
+ + +A++ L + L ++ + R+ + E + K + N+ K+ S + V+
Sbjct: 255 ESPDEAKKAVEALNGAMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIGKEKASNLYVK 314
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
N+ +++E F + G++ ++ + SGL +GFGFV F T EA++A+ L
Sbjct: 315 NLDASVDDDKLQEHFSSCGQITSAKVMRH--DSGLSKGFGFVCFSTSEEAQKALTTL-NG 371
Query: 752 THLYGRRLVLEWAEEADNVEDI 773
T L+GR L + A+ ++ + I
Sbjct: 372 TLLHGRSLYIAMAQRKEDRQRI 393
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 575 REPEPDTT----LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
R+P P T L++KNL+ + S++ F K G I S VA + S +G
Sbjct: 107 RDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGK-------SKCFG 159
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILV 690
FVQF + +S AL L ++ LD ++ + + + E + + + K +NV V
Sbjct: 160 FVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCERKEASEETKFTNV--------YV 211
Query: 691 RNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQ 750
+N+ + + + F FG++ V + K G+G RGFGFV F + +EAK+A++AL
Sbjct: 212 KNLGEDLTEDIIRDKFSEFGKVGTVVIMKD--GNGKSRGFGFVNFESPDEAKKAVEAL-N 268
Query: 751 STHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTAVG 786
L ++L + A++ +++ K +G
Sbjct: 269 GAMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIG 304
>gi|295665859|ref|XP_002793480.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226277774|gb|EEH33340.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 691
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 144/313 (46%), Gaps = 36/313 (11%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT F + PL + +D +T ++KG+ VTF E +A +
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADCEDVARALEEF 109
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G+ F G+ L + +P+ + + G S+ K + N+ + ++I ++NLP+
Sbjct: 110 NGSAFDGKKLKIEVAEPRHRKVDEKGGKSVSTSKPKRERENKRALVQPPKLI-IRNLPWS 168
Query: 459 TL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
P L+ALF FG + ++P G G V + A+ A ++ + L
Sbjct: 169 IAEPEQLEALFRSFGKVKHAVIPKKGNKHSGFGFVVLRGRKNAEKALEAVNGKEVDGRTL 228
Query: 514 YLEWAPE-GVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEED 572
++WA E ++ E + + G K + T +EDN + EVE++
Sbjct: 229 AVDWAAEKNIWDELQNHTDG---------------VKDDGTEKEDNNKVHAEVEDDRNA- 272
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
+T++I+NL F +T++S+ HF + GP+ V + P G FV
Sbjct: 273 --------STIFIRNLPFTATDESLYEHFVQFGPLRYARVVFDPETDRP-----RGTAFV 319
Query: 633 QFYTRESLNQALK 645
F+ +E+ N L+
Sbjct: 320 CFWDKENANSCLR 332
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 30/282 (10%)
Query: 217 APVHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFLGMAYIGFKDE 268
+P+ + T+ V++LP + L YF PL A+V G ++ F D
Sbjct: 40 SPIKAKNRRTLFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADC 99
Query: 269 KNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSV 327
++ +AL + N S + GK+L I + + D+ S+ K K + + +
Sbjct: 100 EDVARALEEFNGSAFDGKKLKI-----EVAEPRHRKVDEKGGKSVSTSKPKRERENKRA- 153
Query: 328 QFAEDIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
+ + ++ +RNL +++ E + L LF +G + ++P K+ +K GF V
Sbjct: 154 -----LVQPPKLIIRNLPWSIAEPEQLEALFRSFGKVKHAVIP--KKGNKHSGFGFVVLR 206
Query: 387 MPEHATQAYQHLDGTVFLGRMLHLIPGKPK----ENEGNVDG-KVHCCISERKLDAFNQV 441
++A +A + ++G GR L + K E + + DG K E +V
Sbjct: 207 GRKNAEKALEAVNGKEVDGRTLAVDWAAEKNIWDELQNHTDGVKDDGTEKEDNNKVHAEV 266
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPP 481
+ R+ I ++NLP+ L F FG L RV+ P
Sbjct: 267 EDDRNASTIFIRNLPFTATDESLYEHFVQFGPLRYARVVFDP 308
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 19/181 (10%)
Query: 227 IVVKNLPAGVKK-KDLKAYFKPLPLASVRTTFL--------GMAYIGFKDEKNCNKALNK 277
++++NLP + + + L+A F+ V+ + G ++ + KN KAL
Sbjct: 160 LIIRNLPWSIAEPEQLEALFRSF--GKVKHAVIPKKGNKHSGFGFVVLRGRKNAEKALEA 217
Query: 278 NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE--DIAE 335
GK+++ + D +A+ + + N+ + +K + ++++ AE D
Sbjct: 218 ----VNGKEVDGRTLAVDWAAEKNIWDELQNH--TDGVKDDGTEKEDNNKVHAEVEDDRN 271
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+ IF+RNL +T T++ L + F ++GPL + D ETD+ +G A V F E+A
Sbjct: 272 ASTIFIRNLPFTATDESLYEHFVQFGPLRYARVVFDPETDRPRGTAFVCFWDKENANSCL 331
Query: 396 Q 396
+
Sbjct: 332 R 332
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 31/192 (16%)
Query: 583 LYIKNLNFNSTE-DSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
L I+NL ++ E + + F+ G + + +K + S G+GFV R++
Sbjct: 160 LIIRNLPWSIAEPEQLEALFRSFGKVKHAVIPKKGNKHS-------GFGFVVLRGRKNAE 212
Query: 642 QALKVLQNSSLDEHQI------------ELKRSNRNLESEATTVKRKSSNVAK----QTG 685
+AL+ + +D + EL+ ++ + T + + A+ +
Sbjct: 213 KALEAVNGKEVDGRTLAVDWAAEKNIWDELQNHTDGVKDDGTEKEDNNKVHAEVEDDRNA 272
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRL---PKKMVGSGLHRGFGFVEFITKNEAK 742
S I +RN+PF A + E F FG L++ R+ P+ + RG FV F K A
Sbjct: 273 STIFIRNLPFTATDESLYEHFVQFGPLRYARVVFDPE----TDRPRGTAFVCFWDKENAN 328
Query: 743 RAMKALCQSTHL 754
++ + T L
Sbjct: 329 SCLRDAPKRTDL 340
>gi|385301644|gb|EIF45821.1| multiple rna-binding domain-containing protein 1 [Dekkera
bruxellensis AWRI1499]
Length = 633
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Query: 305 DDNNNASMENIKAKHWKSQEDSVQF-AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL 363
DD+ N E+ A ++ V+ E+I ++GR+F+RN+ YT TE D LFE YG L
Sbjct: 300 DDHENLKSEHPTAIKKPERKSQVEIDCEEIEKTGRLFLRNILYTSTESDFQTLFESYGEL 359
Query: 364 AEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
EV + +D T +KGFA V F P A AY+ LDG++F GR+LH+I GKPK+ G
Sbjct: 360 KEVHVAVDSRTGASKGFAYVQFKNPSEAIXAYKELDGSIFQGRLLHIIAGKPKKETG 416
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
E +V G V + +D + + R+ILVKN + T ++ F +G L R+L
Sbjct: 487 EAHVIGDVRKYFEGKGVDLTKFQGKEKDDRVILVKNFQHGTTKEEIGEKFAMYGKLNRIL 546
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKE 528
+PP G +VEF ++AFN L++ + + LYLE P+ +F + E
Sbjct: 547 MPPAGTIAIVEFRDAPSGRSAFNKLSFKRLGKSILYLEKGPKDLFVKEPE 596
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 31 QEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKV 90
+++L+ F E G VTDV+L G+ RRFAFIG+ + A+ + + + TY ++++ V
Sbjct: 15 EDKLRKVFSEDGPVTDVKLVRKRNGQSRRFAFIGFKTMEDAERVVKFRDGTYXDTAKVTV 74
Query: 91 EKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLK 128
+ + D T P SW + Q+L ++DLK
Sbjct: 75 QLAKTMRDPTLPLSWR----ERRKQQRLQERKLEEDLK 108
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+TG ++ +RNI + + +S+ + LF+++GELK V + +G +GF +V+F +EA
Sbjct: 331 KTG-RLFLRNILYTSTESDFQTLFESYGELKEVHVAVDS-RTGASKGFAYVQFKNPSEAI 388
Query: 743 RAMKALCQSTHLYGRRL 759
A K L S GR L
Sbjct: 389 XAYKELDGSI-FQGRLL 404
>gi|395744907|ref|XP_002823849.2| PREDICTED: probable RNA-binding protein 19-like [Pongo abelii]
Length = 336
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 96/178 (53%), Gaps = 16/178 (8%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F FIG+ E++AQ AL +FN +++ +SRI
Sbjct: 50 MKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKHFNKSFIDTSRI 109
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
VE C + GD KP++WSK+A S PKQ K T + K ND +
Sbjct: 110 TVEFCKSFGDPAKPRAWSKHAQKPS--------QPKQPPKDSATPEIKKAATWANDGPDA 161
Query: 149 DFLQLHGKDVSKLLPLSNKDGEEKEEEN-----EDESN---NQIAHADISDMEYLKLK 198
+ + K S L + G+E EEE E+E++ ++SDM+YLK K
Sbjct: 162 ESSKGKSKPASDYLNFDSDSGQESEEEGAGKDLEEEASLEPKTAVQKELSDMDYLKSK 219
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++A+
Sbjct: 39 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKAL 96
Query: 746 K 746
K
Sbjct: 97 K 97
>gi|313212745|emb|CBY36675.1| unnamed protein product [Oikopleura dioica]
Length = 3413
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 103/211 (48%), Gaps = 19/211 (9%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLG--------MAYIGF---KDEKNCNKAL 275
I VKNL +K L+ +F L +A+IGF +D KN L
Sbjct: 12 ICVKNLTKSCDEKSLRTFFGRTGAKITDCRLLKNDEGVSRRIAFIGFARPEDAKNALNEL 71
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDS--------V 327
+ K ++ + K + N+ + N I +K K DS
Sbjct: 72 DGAKVGVNKIKVELAKDFRGNTGSKKARKEKPKNEKKAFIDSKVDKDLVDSDEENEKEKE 131
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
+ ED+A++GR+F+RN+SY TE DL L YG L E++LP D+ T + KGFA V + M
Sbjct: 132 EKVEDVADTGRLFIRNMSYLCTETDLKDLLGSYGTLTELVLPTDEVTKRPKGFAFVEYQM 191
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
PE+A +A LDG+ F GR++H++P K+N
Sbjct: 192 PENAVRAMAELDGSSFQGRIMHVLPAVAKKN 222
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 31 QEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
++ L+ F G +TD +L EG RR AFIG+ R + A+ AL+ + V ++IK
Sbjct: 23 EKSLRTFFGRTGAKITDCRLLKNDEGVSRRIAFIGFARPEDAKNALNELDGAKVGVNKIK 82
Query: 90 VEKCSNLGDTTKPKSWSKYAP 110
VE + T K K P
Sbjct: 83 VELAKDFRGNTGSKKARKEKP 103
>gi|154270523|ref|XP_001536116.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409920|gb|EDN05308.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 633
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 145/317 (45%), Gaps = 44/317 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT+ F + PL + +D +T ++KG+ VTF E A +A +
Sbjct: 44 LFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALEEF 103
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI----ILVKN 454
+G+ F GR L + +P+ E + + IS K QV E R + ++++N
Sbjct: 104 NGSDFDGRKLKIEVAEPRHREIDENQGKSVSISHLK-----QVREIRKTQAQPPKLIIRN 158
Query: 455 LPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFK 509
LP+ P L LF FG + ++P G G V + A+ A N++ +
Sbjct: 159 LPWSIAEPDQLSNLFRSFGKVKHAVIPKRGTKHSGFGFVVLRGRKNAEKALNAVNGKEVD 218
Query: 510 EVPLYLEWAPE-GVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN 568
L ++WA E V+ E + + + +EG E + KK ++E+
Sbjct: 219 GRTLAVDWAVEKSVWDEFQNHT-----DDVIDEGVEEDAGKK--------------IDED 259
Query: 569 VEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
VE++ +T++I+NL FN+T+DS+ HF + GP+ V + P G
Sbjct: 260 VEDERNA-----STVFIRNLPFNATDDSLYEHFVQFGPLRYARVVVDAETDRP-----RG 309
Query: 629 YGFVQFYTRESLNQALK 645
FV F+ E L+
Sbjct: 310 TAFVCFWKNEDAISCLR 326
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 20/203 (9%)
Query: 575 REPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQF 634
++P+ TL++++L ++T +S+ +F + P+ TV DP++ S GYGFV F
Sbjct: 36 QKPKSRRTLFVRSLPASATTESLTEYFSQSYPLKHATVVL--DPQTK---QSKGYGFVTF 90
Query: 635 YTRESLNQALKVLQNSSLDEHQIELKRSN-RNLESEATTVKRKSSNVAKQTGS------- 686
E +AL+ S D +++++ + R+ E + K S + KQ
Sbjct: 91 ADHEDAAKALEEFNGSDFDGRKLKIEVAEPRHREIDENQGKSVSISHLKQVREIRKTQAQ 150
Query: 687 --KILVRNIPFQ-AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
K+++RN+P+ A+ ++ LF++FG++K +PK+ H GFGFV + A++
Sbjct: 151 PPKLIIRNLPWSIAEPDQLSNLFRSFGKVKHAVIPKRGTK---HSGFGFVVLRGRKNAEK 207
Query: 744 AMKALCQSTHLYGRRLVLEWAEE 766
A+ A+ + GR L ++WA E
Sbjct: 208 ALNAV-NGKEVDGRTLAVDWAVE 229
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 34/273 (12%)
Query: 226 TIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFLGMAYIGFKDEKNCNKALNK 277
T+ V++LPA + L YF PL A+V G ++ F D ++ KAL +
Sbjct: 43 TLFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALEE 102
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N S + G++L I + + D+N S + H K + + A+
Sbjct: 103 FNGSDFDGRKLKI-----EVAEPRHREIDENQGKS---VSISHLKQVR---EIRKTQAQP 151
Query: 337 GRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
++ +RNL +++ E D L+ LF +G + ++P K K GF V ++A +A
Sbjct: 152 PKLIIRNLPWSIAEPDQLSNLFRSFGKVKHAVIP--KRGTKHSGFGFVVLRGRKNAEKAL 209
Query: 396 QHLDGTVFLGRMLHLIPGKPK----ENEGNVDGKVHCCISE---RKLDAFNQVVEARSKR 448
++G GR L + K E + + D + + E +K+D V + R+
Sbjct: 210 NAVNGKEVDGRTLAVDWAVEKSVWDEFQNHTDDVIDEGVEEDAGKKID--EDVEDERNAS 267
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDL--GRVLV 479
+ ++NLP+ L F FG L RV+V
Sbjct: 268 TVFIRNLPFNATDDSLYEHFVQFGPLRYARVVV 300
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 227 IVVKNLPAGVKKKD-LKAYFKPLP------LASVRTTFLGMAYIGFKDEKNCNKALNK-N 278
++++NLP + + D L F+ + T G ++ + KN KALN N
Sbjct: 154 LIIRNLPWSIAEPDQLSNLFRSFGKVKHAVIPKRGTKHSGFGFVVLRGRKNAEKALNAVN 213
Query: 279 KSFWKGKQLNI-YKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG 337
G+ L + + K ++ DD + +E K K ED ED +
Sbjct: 214 GKEVDGRTLAVDWAVEKSVWDEFQNHTDDVIDEGVEEDAGK--KIDED----VEDERNAS 267
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
+F+RNL + T+D L + F ++GPL + +D ETD+ +G A V F E A
Sbjct: 268 TVFIRNLPFNATDDSLYEHFVQFGPLRYARVVVDAETDRPRGTAFVCFWKNEDA 321
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 180/444 (40%), Gaps = 86/444 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L V+E +L +F GPL V L D + K+ +A V F P A++A L
Sbjct: 31 LYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDASKALACL 90
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T +G+ + ++ H RK N + VKNL
Sbjct: 91 NHTKLMGKPMRIMWS-------------HRDPLPRKTGLAN----------LFVKNLDPS 127
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYG----ITGLVEFLQKNQAKAAFNSLAYTKFKEVPLY 514
L+ +F FG++ V G V+F + A AA N+L T L+
Sbjct: 128 INSASLQDIFCKFGNILSCKVAEENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLF 187
Query: 515 LEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEE 574
V + + E E
Sbjct: 188 -----------------------------------------------VSKFVKKCERKEA 200
Query: 575 REPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQF 634
E T +Y+KNL + TED IR F + G + +V + + + KS G+GFV F
Sbjct: 201 SEETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKS------RGFGFVNF 254
Query: 635 YTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK---SSNVAKQTGSKILVR 691
+ + +A++ L + L ++ + R+ + E + K + N+ K+ S + V+
Sbjct: 255 ESPDEAKKAVEALNGAMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIGKEKASNLYVK 314
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
N+ +++E F + G++ ++ + SGL +GFGFV F T EA++A+ L
Sbjct: 315 NLDASVDDDKLQEHFSSCGQITSAKVMRH--DSGLSKGFGFVCFSTSEEAQKALTTL-NG 371
Query: 752 THLYGRRLVLEWAEEADNVEDIRK 775
T L+GR L + A+ ++ + + +
Sbjct: 372 TLLHGRSLYIAMAQRKEDRQRVLR 395
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 575 REPEPDTT----LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
R+P P T L++KNL+ + S++ F K G I S VA + S +G
Sbjct: 107 RDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGK-------SKCFG 159
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILV 690
FVQF + +S AL L ++ LD ++ + + + E + + + K +NV V
Sbjct: 160 FVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCERKEASEETKFTNV--------YV 211
Query: 691 RNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQ 750
+N+ + + + F FG++ V + K G+G RGFGFV F + +EAK+A++AL
Sbjct: 212 KNLGEDLTEDIIRDKFSEFGKVGTVVIMKD--GNGKSRGFGFVNFESPDEAKKAVEAL-N 268
Query: 751 STHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTAVG 786
L ++L + A++ +++ K +G
Sbjct: 269 GAMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIG 304
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
++ ++V+NL +V +D L + F G + + + ++ +KGF V F E A +A
Sbjct: 307 KASNLYVKNLDASVDDDKLQEHFSSCGQITSAKV-MRHDSGLSKGFGFVCFSTSEEAQKA 365
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNV 422
L+GT+ GR L++ + KE+ V
Sbjct: 366 LTTLNGTLLHGRSLYIAMAQRKEDRQRV 393
>gi|325088692|gb|EGC42002.1| ribosome biogenesis [Ajellomyces capsulatus H88]
Length = 699
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 48/329 (14%)
Query: 357 FEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
F + PL + +D +T ++KG+ VTF E A +A + +G+ F GR L + +P+
Sbjct: 25 FSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALEEFNGSDFDGRKLKIEVAEPR 84
Query: 417 ENEGNVDGKVHCCISERKLDAFNQVVEARSKRI----ILVKNLPYRTL-PTDLKALFEPF 471
E + +G IS K QV E R ++ ++++NLP+ P L +LF F
Sbjct: 85 HREIDENGGKSVSISHLK-----QVREIRKTQVQPPKLIIRNLPWSIAEPDQLSSLFRSF 139
Query: 472 GDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPE-GVFAEA 526
G + ++P G G V A+ A N++ + L ++WA E V+ E
Sbjct: 140 GKVKHAVIPKRGTKHSGFGFVVLRGWKNAEKALNAVNGKEVDGRTLAVDWAVEKSVWDEF 199
Query: 527 KEKS------KGKEKEKNEEEGEEGEEEKKENTAEEDNQQ-------------GVPEVEE 567
+ + KGKEKE + + + E+E + +T +E N + + ++E
Sbjct: 200 QNHTDDVIDGKGKEKEGPDNDNKLNEKEDESSTDDELNGRLEDDEGEEDEDDISMSDLEG 259
Query: 568 NVEE-----DEEREPEPD-TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
+ E+ DEE E E + +T++I+NL FN+T+DS+ HF + GP+ V + P
Sbjct: 260 DEEDAGKKIDEEVEDERNASTVFIRNLPFNATDDSLYEHFVQFGPLRYARVVVDAETDRP 319
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNS 650
G FV F+ E A+ L++S
Sbjct: 320 -----RGTAFVCFWKNE---DAISCLRDS 340
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 20/179 (11%)
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
++F + P+ TV DP++ S GYGFV F E +AL+ S D +++
Sbjct: 23 QYFSQSYPLKHATVVL--DPQTK---QSKGYGFVTFADHEDAAKALEEFNGSDFDGRKLK 77
Query: 659 LKRSN-RNLESEATTVKRKSSNVAKQTGS---------KILVRNIPFQ-AKQSEVEELFK 707
++ + R+ E + K S + KQ K+++RN+P+ A+ ++ LF+
Sbjct: 78 IEVAEPRHREIDENGGKSVSISHLKQVREIRKTQVQPPKLIIRNLPWSIAEPDQLSSLFR 137
Query: 708 AFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
+FG++K +PK+ H GFGFV A++A+ A+ + GR L ++WA E
Sbjct: 138 SFGKVKHAVIPKRGTK---HSGFGFVVLRGWKNAEKALNAV-NGKEVDGRTLAVDWAVE 192
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
ED + +F+RNL + T+D L + F ++GPL + +D ETD+ +G A V F E
Sbjct: 273 EDERNASTVFIRNLPFNATDDSLYEHFVQFGPLRYARVVVDAETDRPRGTAFVCFWKNED 332
Query: 391 ATQAYQ 396
A +
Sbjct: 333 AISCLR 338
>gi|313234382|emb|CBY24581.1| unnamed protein product [Oikopleura dioica]
Length = 1430
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLG--------MAYIGF---KDEKNCNKAL 275
I VKNL +K L+ +F L +A+IGF +D KN L
Sbjct: 1035 ICVKNLTKSCDEKSLRTFFGRTGAKITDCRLLKNDEGVSRRIAFIGFARPEDAKNALNEL 1094
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDS--------V 327
+ K ++ + K + N+ + N I +K K DS
Sbjct: 1095 DGAKVGVNKIKVELAKDFRGNTGSKKARKEKPKNEKKAFIDSKVDKDLVDSDEENEKEKE 1154
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
+ ED+A++GR+F+RN+SY TE DL L YG L E++LP D+ T + KGFA V + M
Sbjct: 1155 EKVEDVADTGRLFIRNMSYLCTETDLKDLLGSYGTLTELVLPTDEVTKRPKGFAFVEYQM 1214
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGK 414
PE+A +A LDG+ F GR++H++PG+
Sbjct: 1215 PENAVRAMAELDGSSFQGRIMHVLPGR 1241
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 434 KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
KLD F + +RS +IILVKNLP LPT+L+ FE FG LGR+++PP G+ L+EF
Sbjct: 1336 KLDTFKKDA-SRSDKIILVKNLPSGALPTELRFKFEKFGGLGRIIMPPSGLAALIEFDGS 1394
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVF 523
AK AF ++AY++F + PLYLEWAP V+
Sbjct: 1395 INAKRAFKAVAYSRFGDRPLYLEWAPSVVW 1424
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 31 QEQLKAKFEEKGT-VTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
++ L+ F G +TD +L EG RR AFIG+ R + A+ AL+ + V ++IK
Sbjct: 1046 EKSLRTFFGRTGAKITDCRLLKNDEGVSRRIAFIGFARPEDAKNALNELDGAKVGVNKIK 1105
Query: 90 VEKCSNLGDTTKPKSWSKYAP 110
VE + T K K P
Sbjct: 1106 VELAKDFRGNTGSKKARKEKP 1126
>gi|225683698|gb|EEH21982.1| nucleolar protein [Paracoccidioides brasiliensis Pb03]
Length = 730
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 155/332 (46%), Gaps = 35/332 (10%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT F + PL + +D +T ++KG+ VTF E +A +
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADSEDVARALEEF 109
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G+VF G+ L + +P+ + + G S+ K + N+ + ++I ++NLP+
Sbjct: 110 NGSVFDGKKLKIEVAEPRHRKVDEKGGKSVSTSKPKRERENKQALVQPPKLI-IRNLPWS 168
Query: 459 TL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
P L+ LF FG + ++P G G V + A+ A ++ + L
Sbjct: 169 IAEPEQLEVLFRSFGKVKHAVIPKKGNKHSGFGFVVLRGRKNAEKALEAVNGKEVDGRTL 228
Query: 514 YLEWAPE-GVFAEAKE-----KSKGKEKEKNEEEGEEGEEEKKEN--------------T 553
++WA E ++ E + K G EKE N + GEE EE K ++
Sbjct: 229 AVDWAAEKNIWDELQNHTDGVKDNGTEKEDN-KSGEEDEETKNQDDDVAMGEVDDEDEGE 287
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
+D+ + E + E +++R +T++I+NL F +T++S+ HF + GP+ V
Sbjct: 288 DVDDDDDDDDDEEVHAEVEDDRNA---STVFIRNLPFTATDESLYEHFVQFGPLRYARVV 344
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALK 645
+ P G FV F+ +E+ N L+
Sbjct: 345 FDPETDRP-----RGTAFVCFWDKENANSCLR 371
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L ++T +S+ +F + P+ TV DP++ S GYGFV F E +
Sbjct: 49 TLFVRSLPLSATTESLTDYFSQSYPLKHATVVL--DPQTK---QSKGYGFVTFADSEDVA 103
Query: 642 QALKVLQNSSLDEHQIELKRS---NRNLESEA----TTVKRKSSNVAKQT---GSKILVR 691
+AL+ S D +++++ + +R ++ + +T K K KQ K+++R
Sbjct: 104 RALEEFNGSVFDGKKLKIEVAEPRHRKVDEKGGKSVSTSKPKRERENKQALVQPPKLIIR 163
Query: 692 NIPFQ-AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQ 750
N+P+ A+ ++E LF++FG++K +PKK H GFGFV + A++A++A+
Sbjct: 164 NLPWSIAEPEQLEVLFRSFGKVKHAVIPKK---GNKHSGFGFVVLRGRKNAEKALEAV-N 219
Query: 751 STHLYGRRLVLEWAEEADNVEDIRKRTN 778
+ GR L ++WA E + ++++ T+
Sbjct: 220 GKEVDGRTLAVDWAAEKNIWDELQNHTD 247
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 210 SVPPVSKA--PVHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFLG 259
++P V A P+ + T+ V++LP + L YF PL A+V G
Sbjct: 31 ALPDVDAALSPIKAKNRRTLFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKG 90
Query: 260 MAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
++ F D ++ +AL + N S + GK+L I + + D+ S+ K K
Sbjct: 91 YGFVTFADSEDVARALEEFNGSVFDGKKLKI-----EVAEPRHRKVDEKGGKSVSTSKPK 145
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKT 377
+ + + + + ++ +RNL +++ E + L LF +G + ++P K+ +K
Sbjct: 146 RERENKQA------LVQPPKLIIRNLPWSIAEPEQLEVLFRSFGKVKHAVIP--KKGNKH 197
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
GF V ++A +A + ++G GR L +
Sbjct: 198 SGFGFVVLRGRKNAEKALEAVNGKEVDGRTLAV 230
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
ED + +F+RNL +T T++ L + F ++GPL + D ETD+ +G A V F E+
Sbjct: 306 EDDRNASTVFIRNLPFTATDESLYEHFVQFGPLRYARVVFDPETDRPRGTAFVCFWDKEN 365
Query: 391 ATQAYQ 396
A +
Sbjct: 366 ANSCLR 371
>gi|156379079|ref|XP_001631286.1| predicted protein [Nematostella vectensis]
gi|156218324|gb|EDO39223.1| predicted protein [Nematostella vectensis]
Length = 683
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 221/543 (40%), Gaps = 132/543 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET-DKTKGFALVTFLMPEHATQAYQH 397
IFVRNL Y +T+ + FE+ GPL + DK+ ++ +GF VTF + E A +A +
Sbjct: 2 IFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFALEEDALKAKDN 61
Query: 398 LDGTVFLGRMLHL---------IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
+ GR +HL PG+ EG V KV I + + + +
Sbjct: 62 IKS--IKGRPIHLDFSEKKARTKPGR----EGTV--KVKAVIESKDKSSSPKGSKKSR-- 111
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAF 500
++++NL + LK F FG++ VP + G V+F A A
Sbjct: 112 -LIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKAL 170
Query: 501 NSLAYTKFKEVPLYLEWA-PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQ 559
+ K P+ ++WA P+ ++ E +EK K K+ N + +E E E T E N+
Sbjct: 171 EEMNAKKILGRPVAVDWAVPKSMYTENQEKHK-KDYNSNTLQDDEKGGEDLEGTTEHKNR 229
Query: 560 QG----------VPEVEENVEEDE--------------EREPEPDT----TLYIKNLNFN 591
V + ++ +E +R D T++I+NL+F+
Sbjct: 230 DDDDDDSDDDEDVKHMSKDDNNNEKSDEDDASEDDNHSQRSKPSDVKEGLTVFIRNLSFD 289
Query: 592 STEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
ST+ +I FK+ G IA V + S G FV++ + ES+ Q L S
Sbjct: 290 STQKNITNLFKQFGDIAYCKVVVDHLTQH-----SKGSAFVKYRSAESVTQCLAATDEDS 344
Query: 652 ----LDEHQIELK----------------------RSNRNLE-----------------S 668
LD +++++ + RNL S
Sbjct: 345 EGLFLDGNRLQVDLAVTPGKLEQMSRQQKEERRDPKDKRNLYLAREGVIKPGSDAAKDLS 404
Query: 669 EATTVKRKSSNVAKQ----------TGSKILVRNIPFQAKQSEVEELFKAFGELK----- 713
+A +KR+ + K+ + +++ RN+P + + E+ ++F G L
Sbjct: 405 KADLLKRQKAEAEKKSKLQNPNYFVSKTRLCARNLPLKLNEKELSKVFSKAGTLDNHKPA 464
Query: 714 ------FVRLPKKMVGSGLHR--GFGFVEFITKNEAKRAMKALCQSTHLYG--RRLVLEW 763
+R +++ SG R GF FVEF EA A++A + L+G RR ++E+
Sbjct: 465 KVVSVLLMRSKERLDSSGKGRPLGFAFVEFTNHKEALAALRATNNNPELFGPDRRPIVEF 524
Query: 764 AEE 766
+ E
Sbjct: 525 SIE 527
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 21/196 (10%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T++++NL +N T+ + F++ GP+ + + KD Q G+G+V F E
Sbjct: 1 TIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKD----NQNRCRGFGYVTFALEED-- 54
Query: 642 QALKVLQN-SSLDEHQIEL---KRSNRNLESEATTVKRKS--------SNVAKQTGSKIL 689
ALK N S+ I L ++ R TVK K+ S+ S+++
Sbjct: 55 -ALKAKDNIKSIKGRPIHLDFSEKKARTKPGREGTVKVKAVIESKDKSSSPKGSKKSRLI 113
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR-GFGFVEFITKNEAKRAMKAL 748
+RN+ F ++ ++E F AFGE+ +P+K VG + GFGFV+F +A +A++ +
Sbjct: 114 IRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKALEEM 173
Query: 749 CQSTHLYGRRLVLEWA 764
+ + GR + ++WA
Sbjct: 174 -NAKKILGRPVAVDWA 188
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D+ E +F+RNLS+ T+ ++T LF+++G +A + +D T +KG A V + E
Sbjct: 274 DVKEGLTVFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESV 333
Query: 392 TQAYQHLD----GTVFLGRMLH----LIPGK 414
TQ D G G L + PGK
Sbjct: 334 TQCLAATDEDSEGLFLDGNRLQVDLAVTPGK 364
>gi|296423589|ref|XP_002841336.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637573|emb|CAZ85527.1| unnamed protein product [Tuber melanosporum]
Length = 732
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 156/353 (44%), Gaps = 68/353 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F+R+L YT T + L+ F PL + D T K++GF VTFL PE A +A +
Sbjct: 49 VFIRSLPYTATTESLSTHFSFIAPLKHATVVADPVTKKSRGFGFVTFLDPEDAQKAVKQF 108
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQV----VEARSKRIILVKN 454
+G F GR L + + + E +SE ++ V V+ R+ R+I V+N
Sbjct: 109 NGAEFGGRRLKVEIAEKRHRE--------TALSEGEVKKGKTVDGEGVKKRAPRLI-VRN 159
Query: 455 LPYRT-LPTDLKALFEPFGDLGRVLVP-----PYGITGLVEFLQKNQAKAAFNSLAYTKF 508
LP+ P DL +F+ +G + V++P P G F+ K A N++ T
Sbjct: 160 LPWSVKKPEDLVKIFQSYGKVRGVIIPRKGNMPNGPMSGFAFVTMKGYKNAENAIEKTNG 219
Query: 509 KEV---PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEE-DNQQGVPE 564
E+ + ++WA AE E + KE E + +G+ EEEK E+ AE+ D GV
Sbjct: 220 MEIDGRTVAVDWA-----AEKNEWEQKKEAEDMDIDGD--EEEKGEDAAEDSDEGSGVGV 272
Query: 565 VEENVEEDEER--------------------------------EPEPDTTLYIKNLNFNS 592
+ ++ E + E E T++I+NL F++
Sbjct: 273 IGDDDAESMDNASDASSDEGSDIEDFDDDEDERNGTQKKFYSVEEEKSLTVFIRNLPFST 332
Query: 593 TEDSIRRHFKKC-GPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
++++ HFK GP+ + + P G GFV F+ +E ++ L
Sbjct: 333 DDETLHEHFKSSFGPVRYARIVMDHATERP-----RGTGFVCFFNKEDCDRCL 380
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T++I++L + +T +S+ HF P+ TV DP + S G+GFV F E
Sbjct: 48 TVFIRSLPYTATTESLSTHFSFIAPLKHATVV--ADPVTK---KSRGFGFVTFLDPEDAQ 102
Query: 642 QALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNV--AKQTGSKILVRNIPF 695
+A+K + ++++ KR SE K K+ + K+ +++VRN+P+
Sbjct: 103 KAVKQFNGAEFGGRRLKVEIAEKRHRETALSEGEVKKGKTVDGEGVKKRAPRLIVRNLPW 162
Query: 696 QAKQSE-VEELFKAFGELKFVRLPKKM-VGSGLHRGFGFVEFITKNEAKRAMKALCQSTH 753
K+ E + ++F+++G+++ V +P+K + +G GF FV A+ A++
Sbjct: 163 SVKKPEDLVKIFQSYGKVRGVIIPRKGNMPNGPMSGFAFVTMKGYKNAENAIEK-TNGME 221
Query: 754 LYGRRLVLEWAEEADNVE 771
+ GR + ++WA E + E
Sbjct: 222 IDGRTVAVDWAAEKNEWE 239
>gi|226293059|gb|EEH48479.1| nucleolar protein [Paracoccidioides brasiliensis Pb18]
Length = 691
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 144/313 (46%), Gaps = 36/313 (11%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT F + PL + +D +T ++KG+ VTF E +A +
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADSEDVARALEEF 109
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G+VF G+ L + +P+ + + G S+ K + N+ + ++I ++NLP+
Sbjct: 110 NGSVFDGKKLKIEVAEPRHRKVDEKGGKSVSTSKPKRERENKQALVQPPKLI-IRNLPWS 168
Query: 459 TL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
P L+ LF FG + ++P G G V + A+ A ++ + L
Sbjct: 169 IAEPEQLEVLFRSFGKVKYAVIPKKGNKHSGFGFVVLRGRKNAEKALEAVNGKEVDGRTL 228
Query: 514 YLEWAPE-GVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEED 572
++WA E V+ E + + G K T +EDN++ EVE++
Sbjct: 229 AVDWAAEKNVWDELQNHTDG---------------VKDNGTEKEDNKKVHAEVEDDRNA- 272
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
+T++I+NL F +T++S+ HF + GP+ V + P G FV
Sbjct: 273 --------STVFIRNLPFTATDESLYEHFVQFGPLRYARVVFDPETDRP-----RGTAFV 319
Query: 633 QFYTRESLNQALK 645
F+ +++ N L+
Sbjct: 320 CFWDKKNANSCLR 332
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 227 IVVKNLPAGVKK-KDLKAYFKPLPLASVRTTFL--------GMAYIGFKDEKNCNKALNK 277
++++NLP + + + L+ F+ V+ + G ++ + KN KAL
Sbjct: 160 LIIRNLPWSIAEPEQLEVLFRSF--GKVKYAVIPKKGNKHSGFGFVVLRGRKNAEKALEA 217
Query: 278 -NKSFWKGKQLNI----YKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
N G+ L + K D ++ DN +N K H + ED
Sbjct: 218 VNGKEVDGRTLAVDWAAEKNVWDELQNHTDGVKDNGTEKEDNKKV-HAE--------VED 268
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF 385
+ +F+RNL +T T++ L + F ++GPL + D ETD+ +G A V F
Sbjct: 269 DRNASTVFIRNLPFTATDESLYEHFVQFGPLRYARVVFDPETDRPRGTAFVCF 321
Score = 38.9 bits (89), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 31/192 (16%)
Query: 583 LYIKNLNFNSTE-DSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
L I+NL ++ E + + F+ G + + +K + S G+GFV R++
Sbjct: 160 LIIRNLPWSIAEPEQLEVLFRSFGKVKYAVIPKKGNKHS-------GFGFVVLRGRKNAE 212
Query: 642 QALKVLQNSSLDEHQI------------ELKRSNRNLESEATTVKRKSSNVAK----QTG 685
+AL+ + +D + EL+ ++ T + A+ +
Sbjct: 213 KALEAVNGKEVDGRTLAVDWAAEKNVWDELQNHTDGVKDNGTEKEDNKKVHAEVEDDRNA 272
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRL---PKKMVGSGLHRGFGFVEFITKNEAK 742
S + +RN+PF A + E F FG L++ R+ P+ + RG FV F K A
Sbjct: 273 STVFIRNLPFTATDESLYEHFVQFGPLRYARVVFDPE----TDRPRGTAFVCFWDKKNAN 328
Query: 743 RAMKALCQSTHL 754
++ + T L
Sbjct: 329 SCLRDAPKRTDL 340
>gi|240279975|gb|EER43479.1| RNA recognition domain-containing protein-containing protein
[Ajellomyces capsulatus H143]
Length = 534
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 163/351 (46%), Gaps = 58/351 (16%)
Query: 336 SGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
SGR +FVR+L + PL + +D +T ++KG+ VTF E A +A
Sbjct: 45 SGRTLFVRSLPAVLL---------AIIPLEHATVVLDPQTKQSKGYGFVTFADHEDAAKA 95
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI----I 450
+ +G+ F GR L + +P+ E + +G IS K QV E R ++ +
Sbjct: 96 LEEFNGSDFDGRKLKIEVAEPRHREIDENGGKSVSISHLK-----QVREIRKTQVQPPKL 150
Query: 451 LVKNLPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAY 505
+++NLP+ P L +LF FG + ++P G G V A+ A N++
Sbjct: 151 IIRNLPWSIAEPDQLSSLFRSFGKVKHAVIPKRGTKHSGFGFVVLRGWKNAEKALNAVNG 210
Query: 506 TKFKEVPLYLEWAPE-GVFAEAKEKS------KGKEKEKNEEEGEEGEEEKKENTAEEDN 558
+ L ++WA E V+ E + + KGKEKE + + + E+E + +T +E N
Sbjct: 211 KEVDGRTLAVDWAVEKSVWDEFQNHTDDVIDGKGKEKEGPDNDNKLNEKEDESSTDDELN 270
Query: 559 QQ-------------GVPEVEENVEE-----DEEREPEPD-TTLYIKNLNFNSTEDSIRR 599
+ + ++E + E+ DEE E E + +T++I+NL FN+T+DS+
Sbjct: 271 GRLEDDEGEEDEDDISMSDLEGDEEDAGKKIDEEVEDERNASTVFIRNLPFNATDDSLYE 330
Query: 600 HFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNS 650
HF + GP+ V + P G FV F+ E A+ L++S
Sbjct: 331 HFVQFGPLRYARVVVDAETDRP-----RGTAFVCFWKNE---DAISCLRDS 373
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 15/152 (9%)
Query: 626 SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN-RNLESEATTVKRKSSNVAKQT 684
S GYGFV F E +AL+ S D +++++ + R+ E + K S + KQ
Sbjct: 78 SKGYGFVTFADHEDAAKALEEFNGSDFDGRKLKIEVAEPRHREIDENGGKSVSISHLKQV 137
Query: 685 GS---------KILVRNIPFQ-AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
K+++RN+P+ A+ ++ LF++FG++K +PK+ H GFGFV
Sbjct: 138 REIRKTQVQPPKLIIRNLPWSIAEPDQLSSLFRSFGKVKHAVIPKRGTK---HSGFGFVV 194
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
A++A+ A+ + GR L ++WA E
Sbjct: 195 LRGWKNAEKALNAV-NGKEVDGRTLAVDWAVE 225
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
ED + +F+RNL + T+D L + F ++GPL + +D ETD+ +G A V F E
Sbjct: 306 EDERNASTVFIRNLPFNATDDSLYEHFVQFGPLRYARVVVDAETDRPRGTAFVCFWKNED 365
Query: 391 ATQAYQ 396
A +
Sbjct: 366 AISCLR 371
>gi|213406493|ref|XP_002174018.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
gi|212002065|gb|EEB07725.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
Length = 690
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 156/359 (43%), Gaps = 69/359 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVRNL+++ T +DLT F P+ ++ DKET ++KGF VTF + E A +A + L
Sbjct: 9 LFVRNLTFSTTSNDLTDFFSNAAPVKHAVVVTDKETGQSKGFGFVTFSLHEDAVRALEEL 68
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
GR+L + P++ G K RK + R + ++V+NLP+
Sbjct: 69 KNKKLDGRILRMEFAAPRKRNGETSDKPKKPEQVRK--------DTRPR--LIVRNLPWS 118
Query: 459 T-LPTDLKALFEPFGDLGRVLVPPYG---ITGLVEFLQKNQAKA--AFNSLAYTKFKEVP 512
P L+ F FG + + VP G + G K++A A A ++L T+
Sbjct: 119 VKKPKHLEPYFAKFGKVREIKVPTKGGGRMCGFAFVWMKDRASAQKAMDTLNATEIDGRV 178
Query: 513 LYLEWAPEGVFAEAKEKSKGKEKEK----------------------------------N 538
+ ++WA E K+ KG+ + N
Sbjct: 179 VAVDWAVSKDEFEQKKTEKGESNDSEESEDESEEESADEDESEEQEENESEVDEEVLVHN 238
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREP---------EPDTTLYIKNLN 589
+ G + E + ED+++ + + +E+ E DE +P++T++I+NL
Sbjct: 239 SDSGSD-----LEASEAEDSEKNLEKDKEDAEADESENSASEEEEDSGKPESTIFIRNLL 293
Query: 590 FNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQ 648
F +TE ++ +HF++ GP+ + K LS G GFV+F + L++ Q
Sbjct: 294 FETTEQALYQHFRQFGPLEYAKIV-----KDYATGLSQGRGFVKFRYQNDYEACLELAQ 347
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 100/193 (51%), Gaps = 10/193 (5%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
++L+++NL F++T + + F P+ V K+ GQ S G+GFV F E
Sbjct: 7 SSLFVRNLTFSTTSNDLTDFFSNAAPVKHAVVVTDKET---GQ--SKGFGFVTFSLHEDA 61
Query: 641 NQALKVLQNSSLDEHQIELK-RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQ 699
+AL+ L+N LD + ++ + R E + +K V K T +++VRN+P+ K+
Sbjct: 62 VRALEELKNKKLDGRILRMEFAAPRKRNGETSDKPKKPEQVRKDTRPRLIVRNLPWSVKK 121
Query: 700 -SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
+E F FG+++ +++P K G G GF FV + A++AM L +T + GR
Sbjct: 122 PKHLEPYFAKFGKVREIKVPTK--GGGRMCGFAFVWMKDRASAQKAMDTL-NATEIDGRV 178
Query: 759 LVLEWAEEADNVE 771
+ ++WA D E
Sbjct: 179 VAVDWAVSKDEFE 191
>gi|390332535|ref|XP_001184447.2| PREDICTED: probable RNA-binding protein 19-like [Strongylocentrotus
purpuratus]
Length = 513
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 15/148 (10%)
Query: 22 EVEFIYKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNT 81
EVE I +E+L+ F +G VTD+QLK+T G FR+FAFIG+ E +AQ A+D+FN +
Sbjct: 49 EVEAQNAIKEEKLRNTFASRGDVTDIQLKFTKGGVFRKFAFIGFKTEVEAQNAVDFFNKS 108
Query: 82 YVFSSRIKVEKCSNLGDTTKPKSWSKYAPDSSAY----QKLHNIAPKQDLKPEHTKDSKP 137
YV SSRI+VE NLGD + WSKY+ SSA+ + D K T+D+
Sbjct: 109 YVDSSRIQVELAKNLGDANLDRPWSKYSEKSSAFQKKQKAKEEKESTDDKKTTATQDTLT 168
Query: 138 GKKS-----------KNDPTFSDFLQLH 154
KK ++DP F +FL+ H
Sbjct: 169 KKKKKKKGLEGLGDLEDDPKFQEFLEAH 196
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 53/196 (27%)
Query: 214 VSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTF------LGMAYIGFKD 267
V K ++R TI ++ +P VK++D+ +F PL + ++R G+ ++ F
Sbjct: 361 VRKDEKYERGDFTIKMRGVPFNVKEEDVVKFFAPLSMKTIRAPLNEKGQRTGVIFVEFAS 420
Query: 268 EKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSV 327
E + KA+ +N+ + + + +++ N Y+ K QE+
Sbjct: 421 EDDITKAMKRNREYMGRRYVELFREEAWNKDAYT-------------------KHQEEP- 460
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
+A+ + GPL EV LPID T K KGFA VTF+M
Sbjct: 461 PWAKQV---------------------------GPLTEVNLPIDTFTKKIKGFAFVTFMM 493
Query: 388 PEHATQAYQHLDGTVF 403
PEHA +AY LDGT F
Sbjct: 494 PEHAVRAYTELDGTSF 509
>gi|159163366|pdb|1WHX|A Chain A, Solution Structure Of The Second Rna Binding Domain From
Hypothetical Protein Bab23448
Length = 111
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYT 506
K +IL KNLP TL +++ F FG LGRVL+P GIT +VEFL+ +A+ AF LAY+
Sbjct: 10 KTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYS 69
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG 545
KF VPLYLEWAP GVF A +K K + E+ E+ E G
Sbjct: 70 KFHHVPLYLEWAPIGVFGAAPQK-KDSQHEQPAEKAESG 107
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
IL +N+P +E++E F FG L V LP+ + + VEF+ EA++A +
Sbjct: 13 ILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITA-------IVEFLEPLEARKAFRH 65
Query: 748 LCQSTHLYGRRLVLEWA 764
L S + L LEWA
Sbjct: 66 LAYSK-FHHVPLYLEWA 81
>gi|196011702|ref|XP_002115714.1| hypothetical protein TRIADDRAFT_59686 [Trichoplax adhaerens]
gi|190581490|gb|EDV21566.1| hypothetical protein TRIADDRAFT_59686 [Trichoplax adhaerens]
Length = 341
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 165/359 (45%), Gaps = 54/359 (15%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
I++++L+A F E G +TDVQLK+T + FRRFAFIGY + A A +FNN+Y+ +S+I
Sbjct: 13 ISEDRLRALFSEFGELTDVQLKFTEDKIFRRFAFIGYRHKCDASTAQKFFNNSYIDTSKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAP-DSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTF 147
++E C L + + W KY+ D ++ K+ + +D + K +N
Sbjct: 73 EIEPCYPLNERIAARVWKKYSKRDHASTSKVRHEGFSRDTS------KRDQSKIENLEER 126
Query: 148 SDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPS 207
++ +H K+V PL NK E ++ + + +D L L + T +
Sbjct: 127 TNITLIHDKNV----PLQNKISEPMDKATVTANFETVMSKRSTDKVCLFLLDAYQTTDNT 182
Query: 208 DPSVPPVSKAPVHKRQYH-----------TIVVKNLPAGVKKKDLKAYFKPLPLASVRTT 256
V VS + ++ TI ++ LP V ++++K +F P L + R
Sbjct: 183 RSKVSNVSMTQLPNKESDTEDNAPAKNIITIKLRGLPFDVNEEEIKEFFHPTKLENTRLM 242
Query: 257 F------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIY----KYSKDNSAKYSGAADD 306
G+A++ F +E++ KA+ NK + + + + ++ K+ + + + A
Sbjct: 243 TNHKGKPNGVAFVDFTNEEDACKAMKSNKDYIRNRYIELFPDEGKHLEISDTPVTSAI-- 300
Query: 307 NNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
N+ S+E +QEDS++ R SY + ++ LF K G + E
Sbjct: 301 NSQISLE--------TQEDSMK------------RRQESYVADIERVSTLFTKIGIMCE 339
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 181/448 (40%), Gaps = 90/448 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L V+E +L +F GPL V L D + K+ +A V F P A++A L
Sbjct: 31 LYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDASKALACL 90
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T +G+ + ++ H RK N + VKNL
Sbjct: 91 NHTKLMGKPMRIMWS-------------HRDPLPRKTGLAN----------LFVKNLDPS 127
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYG----ITGLVEFLQKNQAKAAFNSLAYTKFKEVPLY 514
L+ +F FG++ V G V+F + A AA N+L T L+
Sbjct: 128 INSASLQDIFCKFGNILSCKVAEENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLF 187
Query: 515 LEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEE 574
V + + E E
Sbjct: 188 -----------------------------------------------VSKFVKKCERKEA 200
Query: 575 REPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQF 634
E T +Y+KNL + TED IR F + G + +V + + + KS G+GFV F
Sbjct: 201 SEETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKS------RGFGFVNF 254
Query: 635 YTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK---SSNVAKQTGSKILVR 691
+ + +A++ L + L ++ + R+ + E + K + N+ K+ S + V+
Sbjct: 255 ESPDEAKKAVEALNGAMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIGKEKASNLYVK 314
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
N+ +++E F + G++ ++ + SGL +GFGFV F T EA++A+ L
Sbjct: 315 NLDASVDDDKLQEHFSSCGQITSAKVMRH--DSGLSKGFGFVCFSTSEEAQKALTTL-NG 371
Query: 752 THLYGRRLVLEWAEEADNVEDIRKRTNR 779
T L+GR L + A+ ++ R+R R
Sbjct: 372 TLLHGRSLYIAMAQRKED----RQRVLR 395
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 575 REPEPDTT----LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
R+P P T L++KNL+ + S++ F K G I S VA + S +G
Sbjct: 107 RDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGK-------SKCFG 159
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILV 690
FVQF + +S AL L ++ LD ++ + + + E + + + K +NV V
Sbjct: 160 FVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCERKEASEETKFTNV--------YV 211
Query: 691 RNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQ 750
+N+ + + + F FG++ V + K G+G RGFGFV F + +EAK+A++AL
Sbjct: 212 KNLGEDLTEDIIRDKFSEFGKVGTVVIMKD--GNGKSRGFGFVNFESPDEAKKAVEAL-N 268
Query: 751 STHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTAVG 786
L ++L + A++ +++ K +G
Sbjct: 269 GAMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIG 304
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
++ ++V+NL +V +D L + F G + + + ++ +KGF V F E A +A
Sbjct: 307 KASNLYVKNLDASVDDDKLQEHFSSCGQITSAKV-MRHDSGLSKGFGFVCFSTSEEAQKA 365
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNV 422
L+GT+ GR L++ + KE+ V
Sbjct: 366 LTTLNGTLLHGRSLYIAMAQRKEDRQRV 393
>gi|189205843|ref|XP_001939256.1| nucleolar protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975349|gb|EDU41975.1| nucleolar protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 756
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 168/359 (46%), Gaps = 56/359 (15%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR L+ VT +DLT+ F + P+ ++ +DKET ++K + VTF E A +A + L
Sbjct: 43 LFVRGLAPNVTSEDLTEYFSESYPIKNALVVLDKETRESKSYGFVTFADVEDAQRAKEEL 102
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + + + ++ EG + K K + Q+ EA++ ++I ++NLP+
Sbjct: 103 NNTEIKGKKIKVDFAEARQREG--EEKRPRAGDRAKAEREQQIKEAQTPKLI-IRNLPW- 158
Query: 459 TLPT--DLKALFEPFGDLGRVLVP--PYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEV 511
T+ T DL+ LF +G + V +P P G G V K A+ A L + E
Sbjct: 159 TIKTQEDLQKLFRSYGKVNFVNLPKKPNGELRGFGFVSLRGKKNAERAIQELNGKEIDER 218
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE-NTAEEDNQQGVPEVE---- 566
P+ ++WA + ++ +K+ E+E ++E E+E K+ + AE + E
Sbjct: 219 PIAVDWAVDRDTWQSLQKT---EQEGDDEAKAGAEDEDKDMDDAESSVVSSDDDSEADGS 275
Query: 567 ------------------ENVEEDEE---------REPEPDTTLYIKNLNFNSTEDSIRR 599
E++ ED+E R + TL+++N+ F ++ ++
Sbjct: 276 DEDEEDDDDNEDDSNTDYEDISEDDEEGGIQLDDNRPKREEYTLFVRNVPFTVDDERLKE 335
Query: 600 HFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK-----VLQNSSLD 653
HF++ G I V ++ + P G GFV F+T E + LK LQ +LD
Sbjct: 336 HFQQFGGIRFARVVVDRETERP-----KGTGFVSFFTEEDMINCLKGVPRVKLQKKNLD 389
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+++ L N T + + +F + PI + V K+ + S YGFV F E +
Sbjct: 43 LFVRGLAPNVTSEDLTEYFSESYPIKNALVVLDKETRE-----SKSYGFVTFADVEDAQR 97
Query: 643 ALKVLQNSSLDEHQIELKRSN-RNLESEATTVK-------RKSSNVAKQTGSKILVRNIP 694
A + L N+ + +I++ + R E E + + + + K+++RN+P
Sbjct: 98 AKEELNNTEIKGKKIKVDFAEARQREGEEKRPRAGDRAKAEREQQIKEAQTPKLIIRNLP 157
Query: 695 FQAK-QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTH 753
+ K Q ++++LF+++G++ FV LPKK +G RGFGFV K A+RA++ L
Sbjct: 158 WTIKTQEDLQKLFRSYGKVNFVNLPKKP--NGELRGFGFVSLRGKKNAERAIQEL-NGKE 214
Query: 754 LYGRRLVLEWAEEADNVEDIRK 775
+ R + ++WA + D + ++K
Sbjct: 215 IDERPIAVDWAVDRDTWQSLQK 236
>gi|70946045|ref|XP_742777.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521947|emb|CAH81719.1| hypothetical protein PC000778.04.0 [Plasmodium chabaudi chabaudi]
Length = 244
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 92/148 (62%), Gaps = 7/148 (4%)
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSS 678
+++S+GYGF +F ++E +A+K L + LD H +EL R +N ++ +++
Sbjct: 38 KYISLGYGFAEFKSKELAIEAIKKLTATKLDGHVLELSLSHNRIKKNKQASKNNEEKQVI 97
Query: 679 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
K+ K+LV+N+ FQ + E+ +LF AFG +K VR+PK RG+GFVEF++K
Sbjct: 98 KDKKKITKKLLVKNLAFQVTKEELRKLFSAFGNIKNVRIPKNAYNRS--RGYGFVEFMSK 155
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAEE 766
NE A+ AL Q THLYGR L++++A +
Sbjct: 156 NECLAAINAL-QHTHLYGRHLIIDFAND 182
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 32/172 (18%)
Query: 371 DKETDKTK--------GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNV 422
DKE DKT+ G+ F E A +A + L T G +L L
Sbjct: 27 DKENDKTEQENKYISLGYGFAEFKSKELAIEAIKKLTATKLDGHVLELSLS--------- 77
Query: 423 DGKVHCCISERKLDAFNQ------VVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGR 476
H I + K + N + + + +LVKNL ++ +L+ LF FG++
Sbjct: 78 ----HNRIKKNKQASKNNEEKQVIKDKKKITKKLLVKNLAFQVTKEELRKLFSAFGNIKN 133
Query: 477 VLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVF 523
V +P G VEF+ KN+ AA N+L +T L +++A + +F
Sbjct: 134 VRIPKNAYNRSRGYGFVEFMSKNECLAAINALQHTHLYGRHLIIDFANDLIF 185
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 343 NLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTV 402
NL++ VT+++L KLF +G + V +P + ++++G+ V F+ A L T
Sbjct: 111 NLAFQVTKEELRKLFSAFGNIKNVRIPKN-AYNRSRGYGFVEFMSKNECLAAINALQHTH 169
Query: 403 FLGRMLHLI 411
GR HLI
Sbjct: 170 LYGR--HLI 176
>gi|327301713|ref|XP_003235549.1| Nucleolar protein 4 [Trichophyton rubrum CBS 118892]
gi|326462901|gb|EGD88354.1| Nucleolar protein 4 [Trichophyton rubrum CBS 118892]
Length = 696
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 154/345 (44%), Gaps = 50/345 (14%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T T + LT+ F + PL + +D +T ++KG+ VTF E A A + L
Sbjct: 49 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAREL 108
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-------IL 451
+ +VF G+ + + +P+ E +D K + A ++ E + KR ++
Sbjct: 109 NNSVFEGKKIKIELAEPRHRE--IDEKQGKSVPS---SAPSKAKELKEKRRLESLPPKLI 163
Query: 452 VKNLPYR-TLPTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYT 506
++NLP+ T P L+ LF +G + +VP G G V + A+ A +
Sbjct: 164 IRNLPWSITEPQHLELLFRSYGKIKHAVVPKKGSRVAGFGFVVMRGRKNAERAIEGVNGK 223
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKEN-------------T 553
+ L ++WA E E+ K+ G+ K EE + EE EN
Sbjct: 224 EVDGRTLAVDWAVEKDEWESMNKAAGESDGK--EEAGDCEEAVAENEHLDVVDDGESDAN 281
Query: 554 AEEDNQQGVPEVEENVEED-------------EEREPEPDTTLYIKNLNFNSTEDSIRRH 600
+E++ GV V E+ +ED EE + +T++I+NL F++T++++ H
Sbjct: 282 SEDEEDGGVELVNEDEDEDISMGDAEDDELEEEEEDDRNASTIFIRNLPFSATDETLHEH 341
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK 645
F K GP+ V P G FV FY E + ++
Sbjct: 342 FSKFGPVRYARVVL-----DPATERPKGTAFVCFYKAEDASSCIR 381
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L +T +S+ +F + P+ TV DP++ S GYGFV F E
Sbjct: 48 TLFVRSLPTTATTESLTEYFSQSYPLKHATVVL--DPQTK---QSKGYGFVTFTDHEDAQ 102
Query: 642 QALKVLQNSSLDEHQIELK----RSNRNLESEATTVKRKSSNVAKQTGS---------KI 688
A + L NS + +I+++ R E + +V + + AK+ K+
Sbjct: 103 SAARELNNSVFEGKKIKIELAEPRHREIDEKQGKSVPSSAPSKAKELKEKRRLESLPPKL 162
Query: 689 LVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
++RN+P+ + + +E LF+++G++K +PKK GS + GFGFV + A+RA++
Sbjct: 163 IIRNLPWSITEPQHLELLFRSYGKIKHAVVPKK--GSRVA-GFGFVVMRGRKNAERAIEG 219
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRK 775
+ + GR L ++WA E D E + K
Sbjct: 220 V-NGKEVDGRTLAVDWAVEKDEWESMNK 246
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 36/222 (16%)
Query: 207 SDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFL 258
++ + P +AP +R+ T+ V++LP + L YF PL A+V
Sbjct: 29 AEKTAPDAEQAPAKERKTRTLFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSK 88
Query: 259 GMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G ++ F D ++ A + N S ++GK++ I + I
Sbjct: 89 GYGFVTFTDHEDAQSAARELNNSVFEGKKIKI----------------ELAEPRHREIDE 132
Query: 318 KHWKSQEDSV-QFAEDIAESGR-------IFVRNLSYTVTE-DDLTKLFEKYGPLAEVIL 368
K KS S A+++ E R + +RNL +++TE L LF YG + ++
Sbjct: 133 KQGKSVPSSAPSKAKELKEKRRLESLPPKLIIRNLPWSITEPQHLELLFRSYGKIKHAVV 192
Query: 369 PIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
P K+ + GF V ++A +A + ++G GR L +
Sbjct: 193 P--KKGSRVAGFGFVVMRGRKNAERAIEGVNGKEVDGRTLAV 232
>gi|302498318|ref|XP_003011157.1| hypothetical protein ARB_02679 [Arthroderma benhamiae CBS 112371]
gi|291174705|gb|EFE30517.1| hypothetical protein ARB_02679 [Arthroderma benhamiae CBS 112371]
Length = 803
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 156/344 (45%), Gaps = 48/344 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T T + LT+ F + PL + +D +T ++KG+ VTF E A A + L
Sbjct: 97 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAREL 156
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-------IL 451
+ +VF G+ + + +P+ E +D K + A ++ E + KR ++
Sbjct: 157 NNSVFEGKKIKIELAEPRHRE--IDEKAGKSVPS---SAPSKAKELKEKRRLESLPPKLI 211
Query: 452 VKNLPYR-TLPTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYT 506
++NLP+ T P L+ LF +G + +VP G G V + A+ A +
Sbjct: 212 IRNLPWSITEPQHLELLFRSYGKIKHAVVPKKGSRVAGFGFVVMRGRKNAERAIEGVNGK 271
Query: 507 KFKEVPLYLEWAPEG----VFAEAKEKSKGKEKEKNEEEG-EEGE-----EEKKENTAEE 556
+ L ++WA E +A E+S GK++ + EE E E ++ + + E
Sbjct: 272 EVDGRTLAVDWAVEKDEWENMNKAAEESDGKQEAGDSEEAVAENEHLDVVDDGESDAISE 331
Query: 557 DNQQGVPEVEENVEEDEE---------------REPEPDTTLYIKNLNFNSTEDSIRRHF 601
D + G E+ N +EDE+ + +T++I+NL F++T++++ HF
Sbjct: 332 DEEDGGVEL-GNEDEDEDISMGDAEDDEQEEEEEDDRNASTIFIRNLPFSATDETLHEHF 390
Query: 602 KKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK 645
K GP+ V P G FV FY E + ++
Sbjct: 391 SKFGPVRYARVV-----LDPATERPKGTAFVCFYKAEDASSCIR 429
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 112/208 (53%), Gaps = 23/208 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L +T +S+ +F + P+ TV DP++ S GYGFV F E
Sbjct: 96 TLFVRSLPTTATTESLTEYFSQSYPLKHATVVL--DPQTK---QSKGYGFVTFTDHEDAQ 150
Query: 642 QALKVLQNSSLDEHQIELKRS---NRNLESEA-TTVKRKSSNVAKQTGS---------KI 688
A + L NS + +I+++ + +R ++ +A +V + + AK+ K+
Sbjct: 151 SAARELNNSVFEGKKIKIELAEPRHREIDEKAGKSVPSSAPSKAKELKEKRRLESLPPKL 210
Query: 689 LVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
++RN+P+ + + +E LF+++G++K +PKK GS + GFGFV + A+RA++
Sbjct: 211 IIRNLPWSITEPQHLELLFRSYGKIKHAVVPKK--GSRVA-GFGFVVMRGRKNAERAIEG 267
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRK 775
+ + GR L ++WA E D E++ K
Sbjct: 268 V-NGKEVDGRTLAVDWAVEKDEWENMNK 294
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 204 TAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RT 255
+ ++ +VP +AP +R+ T+ V++LP + L YF PL A+V
Sbjct: 74 SVAAEKTVPDAEQAPAKERKTRTLFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTK 133
Query: 256 TFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMEN 314
G ++ F D ++ A + N S ++GK++ I + ++ + A + +S +
Sbjct: 134 QSKGYGFVTFTDHEDAQSAARELNNSVFEGKKIKI-ELAEPRHREIDEKAGKSVPSSAPS 192
Query: 315 IKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKE 373
KAK K + ++ +RNL +++TE L LF YG + ++P K+
Sbjct: 193 -KAKELKEKRRLESLPP------KLIIRNLPWSITEPQHLELLFRSYGKIKHAVVP--KK 243
Query: 374 TDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+ GF V ++A +A + ++G GR L +
Sbjct: 244 GSRVAGFGFVVMRGRKNAERAIEGVNGKEVDGRTLAV 280
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 178/441 (40%), Gaps = 88/441 (19%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A ++V +L VT+ L F + LA V + D T ++ + V F+ P+ AT
Sbjct: 11 ASPASLYVGDLHPDVTDGQLFDAFSGFKSLASVRICRDSSTGRSLSYGYVNFISPQDATN 70
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + ++ ++ GR + ++ S R DA + + VK
Sbjct: 71 AIEVMNHSMLNGRAIRVM------------------WSRRDADARKSGIGN-----VFVK 107
Query: 454 NLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKF 508
NL L+ LF+ FG++ +V G + G V+F + A AA SL
Sbjct: 108 NLSDSINSLGLQELFKKFGNVLSSKVATSDDGKSKGYGFVQFESEESANAAIESLNGFTV 167
Query: 509 KEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN 568
+ +Y+ G F + D P+++
Sbjct: 168 GDKQIYV-----GKFVR-----------------------------KSDRVLANPDIKY- 192
Query: 569 VEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
T LY+KNL+ E+ ++ F + G I+S+ ++R ++ +S G
Sbjct: 193 ------------TNLYVKNLDPEIGEEHLQEKFSEFGKISSMIISRDENG------VSRG 234
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK----RKSSNVAKQT 684
+GF+ F + +AL+ L S L I + R+ + E E + + V K
Sbjct: 235 FGFINFENSDDAKRALETLNGSQLGSKVIYIARAQKKTEREEVLRRHYEEKCKEQVLKYK 294
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
GS + V+NI E+ E F FG + +L + G+++GFGFV F +EAKRA
Sbjct: 295 GSNVYVKNIDDDVTDEELRERFSQFGTITSSKLMRD--DKGINKGFGFVCFSNPDEAKRA 352
Query: 745 MKALCQSTHLYGRRLVLEWAE 765
+ L Q +G+ L L A+
Sbjct: 353 VNTL-QGCMFHGKPLYLAIAQ 372
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+++KNL+ + ++ FKK G + S VA D KS G YGFVQF + ES N
Sbjct: 104 VFVKNLSDSINSLGLQELFKKFGNVLSSKVATSDDGKSKG------YGFVQFESEESANA 157
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ L ++ + QI + + R + K +N + V+N+ + + +
Sbjct: 158 AIESLNGFTVGDKQIYVGKFVRKSDRVLANPDIKYTN--------LYVKNLDPEIGEEHL 209
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
+E F FG++ + + + +G+ RGFGF+ F ++AKRA++ L + L + + +
Sbjct: 210 QEKFSEFGKISSMIISRDE--NGVSRGFGFINFENSDDAKRALETL-NGSQLGSKVIYIA 266
Query: 763 WAEEADNVEDIRKR 776
A++ E++ +R
Sbjct: 267 RAQKKTEREEVLRR 280
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 130/315 (41%), Gaps = 50/315 (15%)
Query: 217 APVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLP--LASVRTTF-----LGMAYIGFKDEK 269
A K + VKNL + L+ FK L+S T G ++ F+ E+
Sbjct: 94 ADARKSGIGNVFVKNLSDSINSLGLQELFKKFGNVLSSKVATSDDGKSKGYGFVQFESEE 153
Query: 270 NCNKALNKNKSFWKG-KQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQ 328
+ N A+ F G KQ+ + K+ + + D V
Sbjct: 154 SANAAIESLNGFTVGDKQIYVGKFVR----------------------------KSDRVL 185
Query: 329 FAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP 388
DI + ++V+NL + E+ L + F ++G ++ +I+ D E ++GF + F
Sbjct: 186 ANPDIKYT-NLYVKNLDPEIGEEHLQEKFSEFGKISSMIISRD-ENGVSRGFGFINFENS 243
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
+ A +A + L+G+ +++++ + K V + + E K QV++ +
Sbjct: 244 DDAKRALETLNGSQLGSKVIYIARAQKKTEREEVLRRHY----EEKCK--EQVLKYKGSN 297
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSL 503
+ VKN+ +L+ F FG + +++ GI G V F ++AK A N+L
Sbjct: 298 V-YVKNIDDDVTDEELRERFSQFGTITSSKLMRDDKGINKGFGFVCFSNPDEAKRAVNTL 356
Query: 504 AYTKFKEVPLYLEWA 518
F PLYL A
Sbjct: 357 QGCMFHGKPLYLAIA 371
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+N+ VT+++L + F ++G + L D + KGF V F P+ A +A L
Sbjct: 298 VYVKNIDDDVTDEELRERFSQFGTITSSKLMRD-DKGINKGFGFVCFSNPDEAKRAVNTL 356
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
G +F G+ L+L + KE+
Sbjct: 357 QGCMFHGKPLYLAIAQRKED 376
>gi|302657509|ref|XP_003020475.1| hypothetical protein TRV_05442 [Trichophyton verrucosum HKI 0517]
gi|291184312|gb|EFE39857.1| hypothetical protein TRV_05442 [Trichophyton verrucosum HKI 0517]
Length = 793
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 152/349 (43%), Gaps = 58/349 (16%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T T + LT+ F + PL + +D +T ++KG+ VTF E A A + L
Sbjct: 87 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAREL 146
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-------IL 451
+ +VF G+ + + +P+ E +D K + A ++ E + KR ++
Sbjct: 147 NNSVFEGKKIKIELAEPRHRE--IDEKAGKSVPS---SAPSKAKELKEKRRLESLPPKLI 201
Query: 452 VKNLPYR-TLPTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYT 506
++NLP+ T P L+ LF +G + +VP G G V + A+ A +
Sbjct: 202 IRNLPWSITEPQHLELLFRSYGKIKHAVVPKKGSRLAGFGFVVMRGRKNAERAIEGVNGK 261
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
+ L ++WA E K++ + + K E +G+E + +E AE + V + E
Sbjct: 262 EVDGRTLAVDWAVE------KDEWENRNKAAEESDGKEEAGDSEEAVAENEQLDVVDDGE 315
Query: 567 EN-VEEDEE-----------------------------REPEPDTTLYIKNLNFNSTEDS 596
+ + EDEE + +T++I+NL F++T+++
Sbjct: 316 SDAISEDEEDGGVELDNEDEDEDISMDDAEYDEQEEEEEDDRNASTIFIRNLPFSATDET 375
Query: 597 IRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK 645
+ HF K GP+ V P G FV FY E + ++
Sbjct: 376 LHEHFSKFGPVRYARVV-----LDPATERPKGTAFVCFYKAEDASSCIR 419
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%), Gaps = 26/223 (11%)
Query: 567 ENVEEDEEREPEPDT---TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
EN D E+ P + TL++++L +T +S+ +F + P+ TV DP++
Sbjct: 68 ENTAPDAEQAPAKERKTRTLFVRSLPTTATTESLTEYFSQSYPLKHATVV--LDPQTK-- 123
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS---NRNLESEA-TTVKRKSSN 679
S GYGFV F E A + L NS + +I+++ + +R ++ +A +V + +
Sbjct: 124 -QSKGYGFVTFTDHEDAQSAARELNNSVFEGKKIKIELAEPRHREIDEKAGKSVPSSAPS 182
Query: 680 VAKQTGS---------KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRG 729
AK+ K+++RN+P+ + + +E LF+++G++K +PKK GS L G
Sbjct: 183 KAKELKEKRRLESLPPKLIIRNLPWSITEPQHLELLFRSYGKIKHAVVPKK--GSRLA-G 239
Query: 730 FGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVED 772
FGFV + A+RA++ + + GR L ++WA E D E+
Sbjct: 240 FGFVVMRGRKNAERAIEGV-NGKEVDGRTLAVDWAVEKDEWEN 281
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 210 SVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFLGMA 261
+ P +AP +R+ T+ V++LP + L YF PL A+V G
Sbjct: 70 TAPDAEQAPAKERKTRTLFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYG 129
Query: 262 YIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHW 320
++ F D ++ A + N S ++GK++ I + ++ + A + +S + KAK
Sbjct: 130 FVTFTDHEDAQSAARELNNSVFEGKKIKI-ELAEPRHREIDEKAGKSVPSSAPS-KAKEL 187
Query: 321 KSQEDSVQFAEDIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKTKG 379
K + ++ +RNL +++TE L LF YG + ++P K+ + G
Sbjct: 188 KEKRRLESLPP------KLIIRNLPWSITEPQHLELLFRSYGKIKHAVVP--KKGSRLAG 239
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
F V ++A +A + ++G GR L +
Sbjct: 240 FGFVVMRGRKNAERAIEGVNGKEVDGRTLAV 270
>gi|345561947|gb|EGX45019.1| hypothetical protein AOL_s00173g120 [Arthrobotrys oligospora ATCC
24927]
Length = 732
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 154/345 (44%), Gaps = 40/345 (11%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
DI+ +FVR+L+Y+ T D L+ F PL + ID T ++GF VTF P A
Sbjct: 34 DISGQRTVFVRSLNYSTTTDSLSAHFSFIAPLKHATVVIDPATKASRGFGFVTFTDPADA 93
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
+A Q +G VF GR + + + + +G+ A + ++ R+ R+I
Sbjct: 94 VKAVQEFNGKVFEGRHIKVEIAQARHRDGDKPAITSTTAVPVGKPAKDVDIKKRNPRLI- 152
Query: 452 VKNLPYRT-LPTDLKALFEPFGDLGRVLVP--------PYGITGLVEFLQKNQAKAAFNS 502
V+NLP+ P L F FG + V++P P V ++ A+ A +
Sbjct: 153 VRNLPWSVKKPEQLTPYFTKFGKVKEVIIPRKDGSKFGPMAGFAFVTLRKEESARKAIEA 212
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG-----EEEKKENTAEED 557
+ T+ + + ++WA E E K+K+ +E++ +E + E G EEE + EE
Sbjct: 213 INGTEIEGRTVAVDWAVEK--NEWKQKTTEEEEDDDESDEEAGGKGEKEEEDPMDIDEEL 270
Query: 558 NQQGVPEVEENVEEDEERE---------------PEP--DTTLYIKNLNFNSTEDSIRRH 600
NQ + ++ +D+ ++ P+ DT ++I+N+ F + +D + H
Sbjct: 271 NQAAIESDSDSGSDDDMKDIEDQEDDEDEEEDDVPQSTNDTVVFIRNIPFTTDDDGLFEH 330
Query: 601 FKK-CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
FK+ GPI V + D P G FV FY + +
Sbjct: 331 FKENFGPIRYARVVLEHDTGRP-----RGTAFVSFYNESDFEECV 370
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 574 EREPEPDT------TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSM 627
+++P PD T+++++LN+++T DS+ HF P+ TV P S
Sbjct: 26 DQKPAPDADISGQRTVFVRSLNYSTTTDSLSAHFSFIAPLKHATVV-----IDPATKASR 80
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIEL---KRSNRNLESEATT------VKRKSS 678
G+GFV F +A++ + I++ + +R+ + A T V + +
Sbjct: 81 GFGFVTFTDPADAVKAVQEFNGKVFEGRHIKVEIAQARHRDGDKPAITSTTAVPVGKPAK 140
Query: 679 NV-AKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGS--GLHRGFGFVE 734
+V K+ +++VRN+P+ K+ E + F FG++K V +P+K GS G GF FV
Sbjct: 141 DVDIKKRNPRLIVRNLPWSVKKPEQLTPYFTKFGKVKEVIIPRKD-GSKFGPMAGFAFVT 199
Query: 735 FITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
+ A++A++A+ T + GR + ++WA E
Sbjct: 200 LRKEESARKAIEAI-NGTEIEGRTVAVDWAVE 230
>gi|212528572|ref|XP_002144443.1| ribosome biogenesis (Nop4), putative [Talaromyces marneffei ATCC
18224]
gi|210073841|gb|EEA27928.1| ribosome biogenesis (Nop4), putative [Talaromyces marneffei ATCC
18224]
Length = 728
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 172/364 (47%), Gaps = 42/364 (11%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT+ F + L + ID ET K+KG+ VTF E A +A +
Sbjct: 49 LFVRSLPASATTEKLTEFFSQSYVLKHATVVIDPETKKSKGYGFVTFADIEDAQRALEEF 108
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISER---KLDAFNQVVEARSKRIILVKNL 455
+G F GR + + +P++ E + G +E K + + + R+I V+NL
Sbjct: 109 NGADFEGRKIKVEVAQPRKREIDEKGGKSVPTAESVRLKAERTKEREQTAPPRLI-VRNL 167
Query: 456 PYRTLPTD-LKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKE 510
P+ +D L ALF FG + +VP G G V + A+ A ++ +
Sbjct: 168 PWTIKESDQLAALFRSFGKVKHAVVPKKGNVQAGFGFVVLRGRKNAEKALEAVNGKEVDG 227
Query: 511 VPLYLEWAPE-GVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
L ++WA E V+ EA++ + ++K+ +E+ E E+ KE A+ D + V E
Sbjct: 228 RTLAVDWAVEKSVWEEAQQNA--EKKDVDEDAMEVDAEDDKETGAKNDEDESVEVGSEEE 285
Query: 570 EEDEEREPEPD-------------------TTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
+EDE+ + E T++I+NL F ST++++ HFK+ GP+
Sbjct: 286 DEDEDLDDEDLDEDEDEDEDEEDEEDDRNAATIFIRNLPFTSTDETLYEHFKQFGPLRYA 345
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
+ + + P G GFV F+ E A++ L+ + Q++ + + N + +
Sbjct: 346 RIVVDHETERP-----RGTGFVCFWNAED---AIECLRGAP---RQVDAGKEDTNSKKNS 394
Query: 671 TTVK 674
T++K
Sbjct: 395 TSIK 398
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 106/204 (51%), Gaps = 23/204 (11%)
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
P+ L++++L ++T + + F + + TV DP++ S GYGFV F
Sbjct: 43 PQMRRELFVRSLPASATTEKLTEFFSQSYVLKHATVV--IDPETKK---SKGYGFVTFAD 97
Query: 637 RESLNQALKVLQNSSLDEHQIELKRSN---RNLE---------SEATTVKRKSSNVAKQT 684
E +AL+ + + +I+++ + R ++ +E+ +K + + +QT
Sbjct: 98 IEDAQRALEEFNGADFEGRKIKVEVAQPRKREIDEKGGKSVPTAESVRLKAERTKEREQT 157
Query: 685 GS-KILVRNIPFQAKQS-EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+++VRN+P+ K+S ++ LF++FG++K +PKK + GFGFV + A+
Sbjct: 158 APPRLIVRNLPWTIKESDQLAALFRSFGKVKHAVVPKK---GNVQAGFGFVVLRGRKNAE 214
Query: 743 RAMKALCQSTHLYGRRLVLEWAEE 766
+A++A+ + GR L ++WA E
Sbjct: 215 KALEAV-NGKEVDGRTLAVDWAVE 237
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 48/216 (22%)
Query: 227 IVVKNLPAGVKKKD-LKAYFKPLPLASVRTTFL--------GMAYIGFKDEKNCNKALNK 277
++V+NLP +K+ D L A F+ V+ + G ++ + KN KAL
Sbjct: 162 LIVRNLPWTIKESDQLAALFRSF--GKVKHAVVPKKGNVQAGFGFVVLRGRKNAEKALEA 219
Query: 278 -----------------NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMEN------ 314
KS W+ Q N K D A A DD + +
Sbjct: 220 VNGKEVDGRTLAVDWAVEKSVWEEAQQNAEKKDVDEDAMEVDAEDDKETGAKNDEDESVE 279
Query: 315 --------------IKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
+ +++ + ED + IF+RNL +T T++ L + F+++
Sbjct: 280 VGSEEEDEDEDLDDEDLDEDEDEDEDEEDEEDDRNAATIFIRNLPFTSTDETLYEHFKQF 339
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
GPL + +D ET++ +G V F E A + +
Sbjct: 340 GPLRYARIVVDHETERPRGTGFVCFWNAEDAIECLR 375
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 111/212 (52%), Gaps = 21/212 (9%)
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E EE ++ + +P L++ NL++N E+ + R F++ G I +V V +D
Sbjct: 236 EPEETSKKTKTEDPAATGNLFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRD-----S 290
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK----RSNRNLESEATTVKRKSSN 679
S GYG+V+F + + +AL+ +LD ++ + R+ RN + T +++S++
Sbjct: 291 GRSKGYGYVEFESADDAAKALEARHGYTLDNRELRVDLGTPRAQRN---DGQTPQQRSND 347
Query: 680 VAKQTG-------SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
KQ G + + V NI F A Q V E+F+ +G + VRLP +G +GFG+
Sbjct: 348 RQKQYGDTPSQPSATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRE-TGAPKGFGY 406
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
VEF + EAK AM+ L + GR + L+++
Sbjct: 407 VEFSSIEEAKSAMENLT-GVDIAGRPIRLDYS 437
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
ED A +G +FV NLS+ V E+ LT+ FE++G + V + D+++ ++KG+ V F +
Sbjct: 247 EDPAATGNLFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADD 306
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
A +A + G R L + G P+ DG+ S + + ++ +
Sbjct: 307 AAKALEARHGYTLDNRELRVDLGTPRAQRN--DGQTPQQRSNDRQKQYGDT-PSQPSATL 363
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSL 503
V N+ + + +F+ +G + V +P P G G VEF +AK+A +L
Sbjct: 364 FVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGF-GYVEFSSIEEAKSAMENL 422
Query: 504 AYTKFKEVPLYLEWA 518
P+ L+++
Sbjct: 423 TGVDIAGRPIRLDYS 437
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +FV N+S+ T+D +T++F++YG + V LP D+ET KGF V F E A A
Sbjct: 360 SATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAM 419
Query: 396 QHLDGTVFLGRMLHL---IPGKPKE 417
++L G GR + L P P+E
Sbjct: 420 ENLTGVDIAGRPIRLDYSTPKPPRE 444
>gi|196015807|ref|XP_002117759.1| hypothetical protein TRIADDRAFT_61835 [Trichoplax adhaerens]
gi|190579644|gb|EDV19735.1| hypothetical protein TRIADDRAFT_61835 [Trichoplax adhaerens]
Length = 741
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 144/646 (22%), Positives = 265/646 (41%), Gaps = 176/646 (27%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL-----------GMAYIGFKDEKNCNKA 274
TI V+NLP + + + F + +R++FL G Y+ F +++ +A
Sbjct: 15 TIFVRNLPYDITETQFEQLFDDV--GPIRSSFLVRDKGTKDECRGFGYVTFTLQEDAERA 72
Query: 275 LNKNKSFWKGKQLNIYKYSK--DNSAKYSGAADD---NNNASMEN--IKAKHWKSQEDSV 327
KS +G+ + I + D + K D+ N++ +E IK SQ D+V
Sbjct: 73 TTLKKSI-RGRHIQILLAQRKFDTNTKRKQNHDEIEEVNSSHLEAPVIKKSRSYSQLDNV 131
Query: 328 QFAEDI------AESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGF 380
Q I A SGR I ++NLS ++ L
Sbjct: 132 QLENTISSIVSRANSGRTILIQNLSPDISRKRL--------------------------- 164
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQ 440
Y+ L V + + + +PG ++ NV +S K+D Q
Sbjct: 165 --------------YKRLRKKVDIEELKYPLPG----SQLNVQ-----IVS--KIDK-TQ 198
Query: 441 VVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAF 500
++ +K I+V+NL + DLK +F FG++ V +PP G ++F A A
Sbjct: 199 SKKSLNKAKIIVRNLCFNCRERDLKEIFSQFGNVITVNIPPKGGFAFIQFENVFHAANAI 258
Query: 501 NSLAYTKFKEVPLYLEWA-PEGVFAE-AKEKSKGKEKEK----------NEEEGEEGEEE 548
L T+ + L+WA P+ ++ + E SK E EK + + E +
Sbjct: 259 KELNMTEVMNRRISLDWALPKSLYLKNTAENSKEHEGEKVTSDNCDSDLTDSDCEAVAKT 318
Query: 549 KKENT---AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
NT AEE+ ++ E++E+V+E + TL+I+NL+F+ ED ++ F K G
Sbjct: 319 DSANTTENAEEETKRNRHEIKEDVQEGK--------TLFIRNLSFDCKEDELKEFFSKFG 370
Query: 606 PI--ASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNS----SLDEHQIEL 659
I + + R D S G FV++ + S ++ L+ N +L + ++ +
Sbjct: 371 KIRYCKIVIDRAND-------YSRGVAFVKYVEKGSADKCLESYNNGDYDFTLHDRKLII 423
Query: 660 KRS---------------------NRNLESEA--------------TTVKRKSSNVAKQ- 683
R+ N L SE + +K+++ K
Sbjct: 424 CRAVSRTDACNFSVTKPSKDQDKRNLYLASEGVITADSAAAGGLSKSDLKKRAMTEMKNK 483
Query: 684 ----------TGSKILVRNIPFQAKQSEVEE-LFKAFGELKFVRLPKKMV---------- 722
+ +++ +RNIP Q +++++ + + E + VR+ K +
Sbjct: 484 AKLKNPNYFVSKTRLCIRNIPIQVSDADLKKVIISSVDEKRPVRIKKVTIMRDRNRINSH 543
Query: 723 GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG--RRLVLEWAEE 766
G RGFGF+E + ++A + ++A+ + H++G +RL++ +A E
Sbjct: 544 GIAKSRGFGFMELLNHDDALKILRAINNNPHIFGSEKRLIVGFAIE 589
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET-DKTKGFALVTFLMP 388
+E + IFVRNL Y +TE +LF+ GP+ L DK T D+ +GF VTF +
Sbjct: 7 SEIVTSRSTIFVRNLPYDITETQFEQLFDDVGPIRSSFLVRDKGTKDECRGFGYVTFTLQ 66
Query: 389 EHATQA 394
E A +A
Sbjct: 67 EDAERA 72
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
S I VRN+P+ +++ E+LF G ++ L + RGFG+V F + +A+RA
Sbjct: 14 STIFVRNLPYDITETQFEQLFDDVGPIRSSFLVRDKGTKDECRGFGYVTFTLQEDAERA 72
>gi|330935481|ref|XP_003304989.1| hypothetical protein PTT_17723 [Pyrenophora teres f. teres 0-1]
gi|311318179|gb|EFQ86926.1| hypothetical protein PTT_17723 [Pyrenophora teres f. teres 0-1]
Length = 756
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 164/369 (44%), Gaps = 76/369 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR L+ VT +DLT+ F + P+ ++ +DKET ++K + VTF E A +A + L
Sbjct: 43 LFVRGLAPNVTSEDLTEYFSESYPIKNALVVLDKETRESKSYGFVTFADVEDAQRAKEEL 102
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + + + ++ EG + K K + Q+ EA++ ++I ++NLP+
Sbjct: 103 NNTEIKGKKIKVDFAEARQREG--EEKRPSAGDRAKAEREQQIKEAQTPKLI-IRNLPWT 159
Query: 459 T-LPTDLKALFEPFGDLGRVLVP--PYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVP 512
P DL+ +F +G + V +P P G G V K A+ A L + E P
Sbjct: 160 IKTPEDLQKIFRSYGKVNFVNLPKKPNGELRGFGFVSLRGKKNAERAIQELNGKEIGERP 219
Query: 513 LYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEE---------------------------- 544
+ ++WA ++ + +K E+EG++
Sbjct: 220 IAVDWAV--------DRDTWQNLQKTEQEGDDEAKAGADDEDEDMDDAESSVVSSDDDSE 271
Query: 545 -----------GEEEKKENTAEED----NQQGVPEVEENVEEDEEREPEPDTTLYIKNLN 589
++E NT ED +++G E+E+N + EE TL+++N+
Sbjct: 272 ADGSDEDDEDEDDDEDDSNTDYEDISEDDEEGGVELEDNRPKREE------YTLFVRNVP 325
Query: 590 FNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK---- 645
F ++ ++ HF++ G I V ++ + P G GFV F+ E + LK
Sbjct: 326 FTVDDERLKEHFQQFGGIRFARVVVDRETERP-----KGTGFVSFFAEEDMINCLKGVPR 380
Query: 646 -VLQNSSLD 653
LQ +LD
Sbjct: 381 VKLQKKNLD 389
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+++ L N T + + +F + PI + V K+ + S YGFV F E +
Sbjct: 43 LFVRGLAPNVTSEDLTEYFSESYPIKNALVVLDKETRE-----SKSYGFVTFADVEDAQR 97
Query: 643 ALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGS----KILVRNIP 694
A + L N+ + +I++ R E + R + +Q K+++RN+P
Sbjct: 98 AKEELNNTEIKGKKIKVDFAEARQREGEEKRPSAGDRAKAEREQQIKEAQTPKLIIRNLP 157
Query: 695 FQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTH 753
+ K E ++++F+++G++ FV LPKK +G RGFGFV K A+RA++ L
Sbjct: 158 WTIKTPEDLQKIFRSYGKVNFVNLPKKP--NGELRGFGFVSLRGKKNAERAIQEL-NGKE 214
Query: 754 LYGRRLVLEWAEEADNVEDIRK 775
+ R + ++WA + D ++++K
Sbjct: 215 IGERPIAVDWAVDRDTWQNLQK 236
>gi|169610962|ref|XP_001798899.1| hypothetical protein SNOG_08590 [Phaeosphaeria nodorum SN15]
gi|111062638|gb|EAT83758.1| hypothetical protein SNOG_08590 [Phaeosphaeria nodorum SN15]
Length = 742
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 165/353 (46%), Gaps = 38/353 (10%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
++FVR L+ +VT DLT F + P+ ++ +DKET ++K F VTF E A +A +
Sbjct: 42 QLFVRGLAPSVTTQDLTDFFSESYPIKNALVVLDKETKESKKFGFVTFADVEDAQRAKEE 101
Query: 398 LDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
+ G G+ + + + ++ EG + K + K+ ++ +A++ +II V+NLP+
Sbjct: 102 MKGKELQGKKIVMDFAEARQREG--EPKDPKLANRFKVQREQEMKDAQAPKII-VRNLPW 158
Query: 458 RT-LPTDLKALFEPFGDLGRVLVP--PYG-ITG--LVEFLQKNQAKAAFNSLAYTKFKEV 511
P L F +G + V +P P G + G V K A+ A L +
Sbjct: 159 SIKTPEQLGKHFLSYGKVNFVTLPKKPSGELRGFAFVALRGKKHAERAIQGLNGKEIDGR 218
Query: 512 PLYLEWAPEGVFAEAKEKSK--GKEKEKNEEEGEE-----------------GEEEKKEN 552
+ ++WA + + +K++ G + + E+ +E EE ++N
Sbjct: 219 TIAVDWAVDRDTWQGLQKTEQDGDDAKAGAEDDDEDMSDAESSVVSSEDDSDAEEGSEDN 278
Query: 553 TAEEDNQQGVPEVEENVEE-----DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPI 607
+D+ +V+++ EE D+ER + T++++NL F T++S++ HF++ G +
Sbjct: 279 EDLDDSNTDYEDVDDSDEEGGVQLDDERPKREEFTVFVRNLPFTVTDESLKEHFEQFGGV 338
Query: 608 ASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
V ++ + P G GFV FY E + LK + L ++ K
Sbjct: 339 RFARVVLDRETERP-----KGTGFVSFYGEEDMINCLKGVPKVKLQSRNVDKK 386
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+++ L + T + F + PI + V K+ K +F GFV F E +
Sbjct: 43 LFVRGLAPSVTTQDLTDFFSESYPIKNALVVLDKETKESKKF-----GFVTFADVEDAQR 97
Query: 643 ALKVLQNSSLDEHQIELKRSN-RNLESEATTVK-------RKSSNVAKQTGSKILVRNIP 694
A + ++ L +I + + R E E K ++ + KI+VRN+P
Sbjct: 98 AKEEMKGKELQGKKIVMDFAEARQREGEPKDPKLANRFKVQREQEMKDAQAPKIIVRNLP 157
Query: 695 FQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTH 753
+ K E + + F ++G++ FV LPKK SG RGF FV K A+RA++ L
Sbjct: 158 WSIKTPEQLGKHFLSYGKVNFVTLPKKP--SGELRGFAFVALRGKKHAERAIQGL-NGKE 214
Query: 754 LYGRRLVLEWAEEADNVEDIRK 775
+ GR + ++WA + D + ++K
Sbjct: 215 IDGRTIAVDWAVDRDTWQGLQK 236
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 102/267 (38%), Gaps = 79/267 (29%)
Query: 223 QYHTIVVKNLPAGVKKKDL---------KAYFKPLPLASVRTTFLGMAYIGFKDEKNCNK 273
Q I+V+NLP +K + K F LP G A++ + +K+ +
Sbjct: 147 QAPKIIVRNLPWSIKTPEQLGKHFLSYGKVNFVTLP-KKPSGELRGFAFVALRGKKHAER 205
Query: 274 ALNK-----------------NKSFWKGKQLNIYKYSKDNSAKYSGAADDN---NNASME 313
A+ ++ W+G Q K +D +GA DD+ ++A
Sbjct: 206 AIQGLNGKEIDGRTIAVDWAVDRDTWQGLQ----KTEQDGDDAKAGAEDDDEDMSDAESS 261
Query: 314 NIKAKHWKSQEDSVQFAEDIAESGR---------------------------IFVRNLSY 346
+ ++ E+ + ED+ +S +FVRNL +
Sbjct: 262 VVSSEDDSDAEEGSEDNEDLDDSNTDYEDVDDSDEEGGVQLDDERPKREEFTVFVRNLPF 321
Query: 347 TVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGR 406
TVT++ L + FE++G + + +D+ET++ KG V+F E
Sbjct: 322 TVTDESLKEHFEQFGGVRFARVVLDRETERPKGTGFVSFYGEED---------------- 365
Query: 407 MLHLIPGKPKE--NEGNVDGKVHCCIS 431
M++ + G PK NVD K I+
Sbjct: 366 MINCLKGVPKVKLQSRNVDKKDGSTIT 392
>gi|147838149|emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
Length = 544
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 185/429 (43%), Gaps = 83/429 (19%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A ++V +L +T+ L F ++ LA V + D + ++ + V F+ P+ A+
Sbjct: 9 AAPASLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASH 68
Query: 394 AYQHLDGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
A + + T+ G+++ ++ P + GNV KV+ L A +++A
Sbjct: 69 AIEAKNHTMLHGKVIRVMWSHRDPDARRSGIGNVFVKVY-------LFAVTSIIDAELYF 121
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSL 503
++ + NL L+A+F+ FG++ +V+V G + G V+F + A AA L
Sbjct: 122 LVCL-NLSDSIDNVRLQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKL 180
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
G + K+ GK
Sbjct: 181 ----------------NGFIIDGKQIYAGK------------------------------ 194
Query: 564 EVEENVEEDEEREPEPD---TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
V + + P PD T LYIKNL+ + TE+++R F + G IAS+ +++ ++
Sbjct: 195 ----FVRKTDRVLPNPDAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENG-- 248
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK----RK 676
+S G+GFV F + E +AL+ L L + + R+ + E E + ++
Sbjct: 249 ----MSRGFGFVNFESPEDAKRALEALNGLQLGSKVLYVARAQKKAEREQLLRRQFEEKR 304
Query: 677 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
+ + K GS + V+NI ++ E F G++ +L + G+ +GFGFV F
Sbjct: 305 NEQILKYRGSNVYVKNIDDNVNDDDLREHFSVCGKITSAKLMRDQ--KGISKGFGFVCFS 362
Query: 737 TKNEAKRAM 745
T +EA +A+
Sbjct: 363 TPDEASKAV 371
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 20/200 (10%)
Query: 580 DTTLY-IKNLNFNSTEDSIRRH--FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
D LY + LN + + D++R F+K G I S V +D KS GYGFVQF +
Sbjct: 116 DAELYFLVCLNLSDSIDNVRLQAMFQKFGNILSCKVVVTEDGKS------KGYGFVQFES 169
Query: 637 RESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
E N A++ L +D QI + R + K +N + ++N+
Sbjct: 170 EEYANAAIEKLNGFIIDGKQIYAGKFVRKTDRVLPNPDAKYTN--------LYIKNLDPD 221
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
+ + E F FG++ + + K +G+ RGFGFV F + +AKRA++AL L
Sbjct: 222 VTEEALREKFFEFGKIASLVISKDE--NGMSRGFGFVNFESPEDAKRALEAL-NGLQLGS 278
Query: 757 RRLVLEWAEEADNVEDIRKR 776
+ L + A++ E + +R
Sbjct: 279 KVLYVARAQKKAEREQLLRR 298
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 174/450 (38%), Gaps = 89/450 (19%)
Query: 250 LASVRTT-------FLGMAYIGFKDEKNCNKALN-KNKSFWKGKQLNIYKYSKDNSAKYS 301
LASVR L Y+ F ++ + A+ KN + GK + + +D A+ S
Sbjct: 38 LASVRICRDSSSGRSLCYGYVNFISPQDASHAIEAKNHTMLHGKVIRVMWSHRDPDARRS 97
Query: 302 GAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYG 361
G + N+ K + S+ AE + NLS ++ L +F+K+G
Sbjct: 98 G---------IGNVFVKVYLFAVTSIIDAELYF----LVCLNLSDSIDNVRLQAMFQKFG 144
Query: 362 PLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGN 421
+ + + E K+KG+ V F E+A A + L+G +
Sbjct: 145 NILSCKV-VVTEDGKSKGYGFVQFESEEYANAAIEKLNGFI------------------- 184
Query: 422 VDGK-VHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP 480
+DGK ++ RK D +A+ + +KNL L+ F FG + +++
Sbjct: 185 IDGKQIYAGKFVRKTDRVLPNPDAKYTNL-YIKNLDPDVTEEALREKFFEFGKIASLVIS 243
Query: 481 P--YGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEK 535
G++ G V F AK A +L + LY+ A A++K+
Sbjct: 244 KDENGMSRGFGFVNFESPEDAKRALEALNGLQLGSKVLYV--------ARAQKKA----- 290
Query: 536 EKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTED 595
E E+ + E+ N+Q + NV Y+KN++ N +D
Sbjct: 291 --------EREQLLRRQFEEKRNEQILKYRGSNV--------------YVKNIDDNVNDD 328
Query: 596 SIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEH 655
+R HF CG I S + R + + +S G+GFV F T + ++A+
Sbjct: 329 DLREHFSVCGKITSAKLMRDQ------KGISKGFGFVCFSTPDEASKAVNTFHGYMFHRK 382
Query: 656 QIELKRSNRNLESEATTVKRKSSNVAKQTG 685
+ + + R + +A + +A G
Sbjct: 383 PLYVAIAQRKEDRQAQLQLHYAQRMAGLAG 412
>gi|451856277|gb|EMD69568.1| hypothetical protein COCSADRAFT_32266 [Cochliobolus sativus ND90Pr]
Length = 754
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 170/371 (45%), Gaps = 40/371 (10%)
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
D A A S +V A+++A ++FVR+L+ VT +DLT+ F + P+
Sbjct: 13 DGAEAITATADADQPSSNAAAVGTAKEVARR-QLFVRSLAPDVTSEDLTEYFSESYPIKN 71
Query: 366 VILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGK 425
++ +DKET ++KG+ VTF E A +A + L+ T G+ + + + ++ EG + K
Sbjct: 72 ALVVLDKETRESKGYGFVTFADVEDAQRAKEELNNTQIKGKKIKVDFAEARQREG--EEK 129
Query: 426 VHCCISERKLDAFNQVVEARSKRIILVKNLPYRT-LPTDLKALFEPFGDLGRVLVP--PY 482
K + QV EA+ +II V+NLP+ P DL+ LF +G + +P P
Sbjct: 130 RPRAADRIKAEREQQVKEAQVPKII-VRNLPWTIKTPEDLEKLFRCYGKVNFANLPKKPN 188
Query: 483 GIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAP--------EGVFAEAKEKSK 531
G G V K A+ A L + P+ ++WA + E K+
Sbjct: 189 GELRGFGFVSLRGKKNAEKAMQELNGKEIGGRPIAVDWAVDRDTWLNLQQTEQEGDAKAD 248
Query: 532 GKE---------------KEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEE-- 574
G E ++++EE +E++ +N+ +D + E VE D++
Sbjct: 249 GNEDMDDAESSVVSSDEDDDEDDEEMNSEDEDESDNSDIDDEDMSEDDEEGGVELDQQDH 308
Query: 575 REPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQF 634
R D T++++N+ F ++ ++ HF++ G I V +D + P G FV F
Sbjct: 309 RPKREDYTVFVRNVPFTVDDERLKEHFQQFGGIRYARVVVDRDTERP-----KGTAFVAF 363
Query: 635 YTRESLNQALK 645
+T E + LK
Sbjct: 364 FTEEDMVNCLK 374
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 17/195 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++++L + T + + +F + PI + V K+ + S GYGFV F E +
Sbjct: 45 LFVRSLAPDVTSEDLTEYFSESYPIKNALVVLDKETRE-----SKGYGFVTFADVEDAQR 99
Query: 643 ALKVLQNSSLDEHQIELKRSN-RNLESE------ATTVK-RKSSNVAKQTGSKILVRNIP 694
A + L N+ + +I++ + R E E A +K + V + KI+VRN+P
Sbjct: 100 AKEELNNTQIKGKKIKVDFAEARQREGEEKRPRAADRIKAEREQQVKEAQVPKIIVRNLP 159
Query: 695 FQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTH 753
+ K E +E+LF+ +G++ F LPKK +G RGFGFV K A++AM+ L
Sbjct: 160 WTIKTPEDLEKLFRCYGKVNFANLPKKP--NGELRGFGFVSLRGKKNAEKAMQEL-NGKE 216
Query: 754 LYGRRLVLEWAEEAD 768
+ GR + ++WA + D
Sbjct: 217 IGGRPIAVDWAVDRD 231
>gi|89273975|emb|CAJ81490.1| RNA binding motif protein 19 [Xenopus (Silurana) tropicalis]
Length = 261
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 59/81 (72%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
I +++ + F GT+TD LKYT +GKFR+F FIG+ E++A+AAL +FN +++ +SR+
Sbjct: 13 IKEDRFRELFAAFGTLTDCSLKYTKDGKFRKFGFIGFVSEEEAKAALGHFNKSFIDTSRV 72
Query: 89 KVEKCSNLGDTTKPKSWSKYA 109
VE C + GD KPK+WSK++
Sbjct: 73 SVEFCKSFGDPDKPKAWSKHS 93
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K+ ELF AFG L L K G R FGF+ F+++ EAK A+
Sbjct: 2 SRLIVKNLPNGIKEDRFRELFAAFGTLTDCSL--KYTKDGKFRKFGFIGFVSEEEAKAAL 59
>gi|6474847|dbj|BAA87307.1| Hypothetical protein YPR112c [Schizosaccharomyces pombe]
Length = 160
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Query: 323 QEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFAL 382
QE ++Q I+E+ R+F+RNL+Y+ EDDL LF +G L +V +PIDK+T+ KGFA
Sbjct: 9 QERNIQL---ISETKRLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAY 65
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
+ F + A +AY LD F GR+LH++P K + +
Sbjct: 66 IDFHDADDAVRAYLELDAKPFQGRLLHVLPAKARSS 101
>gi|328768982|gb|EGF79027.1| hypothetical protein BATDEDRAFT_12759 [Batrachochytrium
dendrobatidis JAM81]
Length = 820
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 150/340 (44%), Gaps = 47/340 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV L +T DDL + F + GP+ + K T + G V F + E A +A L
Sbjct: 69 LFVSTLPFTAKADDLEEFFSQIGPVRSCFIAKQKLTGLSSGCGYVHFALAEDAQRALVEL 128
Query: 399 DGTVFL-GRMLHL-IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
F+ GR L + I + GK I + + +A+ + ++++NL
Sbjct: 129 KKQKFMGGRTLKMKIALRKSIVVQRKSGKPRATIK-----SVIEPTKAKQRARLIIRNLS 183
Query: 457 YRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSLAYTKFKE 510
+ P +L+ +F FG + VP G G VEF + A+ A ++ TK
Sbjct: 184 FNCKPENLQNVFSAFGIVKDCSVPHLDDGKARGF-GFVEFETMDCAQRALQAVNGTKILN 242
Query: 511 VPLYLEWA-PEGVF--AEAKEKSKGKEKEKNEEEGEEGEEEKKENTA------------- 554
P+ ++WA + F A ++G++ NE++ + + E T
Sbjct: 243 RPVAVDWALAKATFDRLSALPTAEGEDSSDNEDQVADAAQHDNEMTTSLKPQNSLHESMM 302
Query: 555 EEDNQQG--VPEVEENVEEDE------EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGP 606
E D + G + +E+ EED+ + E + DTTL+I+NL+F +TE + F G
Sbjct: 303 EVDGEDGMEITMDDESSEEDDGIEIIMDNEDDADTTLFIRNLSFETTEKELYNAFSTFGK 362
Query: 607 I--ASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ A +T+ K+ G LS G GFV FY ++ + L
Sbjct: 363 LRYAKITM-----DKTSG--LSRGTGFVCFYDEKNTSDCL 395
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+TL++ L F + D + F + GP+ S +A++K LS G G+V F E
Sbjct: 67 STLFVSTLPFTAKADDLEEFFSQIGPVRSCFIAKQK-----LTGLSSGCGYVHFALAEDA 121
Query: 641 NQAL------KVLQNSSLDEHQIELKRS---NRNLESEATTVKRKSSNVAKQTGSKILVR 691
+AL K + +L + +I L++S R T+K + +++++R
Sbjct: 122 QRALVELKKQKFMGGRTL-KMKIALRKSIVVQRKSGKPRATIKSVIEPTKAKQRARLIIR 180
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
N+ F K ++ +F AFG +K +P + G RGFGFVEF T + A+RA++A+
Sbjct: 181 NLSFNCKPENLQNVFSAFGIVKDCSVPH--LDDGKARGFGFVEFETMDCAQRALQAV-NG 237
Query: 752 THLYGRRLVLEWA 764
T + R + ++WA
Sbjct: 238 TKILNRPVAVDWA 250
>gi|359495203|ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 171/423 (40%), Gaps = 94/423 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L + E L LF++ P+ + + D+ + G+A V F P+ AT A +HL
Sbjct: 475 LYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNALEHL 534
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + ++ H S RK N + +KNL
Sbjct: 535 NFTPLNGKPIRIM-------------FSHRDPSIRKSGFAN----------VFIKNL--- 568
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL + F G VL + G V+F Q+ A+ A L +
Sbjct: 569 DPSIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLIND 628
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G+F +E+++G G P+
Sbjct: 629 KQVYV-----GLFVRHQERNRGN---------------------------GSPKF----- 651
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
T +Y+KNL+ +T+D ++ F K G I S V R +S +G
Sbjct: 652 ----------TNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASG------MSKCFG 695
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQI-----ELKRSNRNLESEATTVKRKSSNVAKQTG 685
FV F + +S A++ L ++ ++ ++ ++S R E A + + + K G
Sbjct: 696 FVNFQSSDSAAAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKG 755
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ + ++N+ +++ELF FG + ++ + GL +G GFV F+T EA RA+
Sbjct: 756 TNLYLKNLDDSVNDEKLKELFSEFGTITSCKV--MLDPQGLSKGSGFVAFLTPEEATRAL 813
Query: 746 KAL 748
+
Sbjct: 814 NVM 816
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 173/461 (37%), Gaps = 111/461 (24%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------FLGMAYIGFKDEKNCNKAL-N 276
++ V +L + + L F+ + P+ S+R LG AY+ F ++ AL +
Sbjct: 474 SLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNALEH 533
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N + GK + I +D S + SG A+
Sbjct: 534 LNFTPLNGKPIRIMFSHRDPSIRKSGFAN------------------------------- 562
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
+F++NL ++ L F +G + + +D ++KG+ V F E A A +
Sbjct: 563 --VFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNN-GQSKGYGFVQFEQEEAAQNAIK 619
Query: 397 HLDGTVFLGRMLH--LIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKN 454
L+G + + ++ L + N GN K F V VKN
Sbjct: 620 RLNGMLINDKQVYVGLFVRHQERNRGNGSPK------------FTNV---------YVKN 658
Query: 455 LPYRTLPTDLKALFEPFGDLGRVLV--PPYGIT---GLVEFLQKNQAKAAFNSLAYTKFK 509
L T DLK +F +G + +V G++ G V F + A AA L F
Sbjct: 659 LSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAAAVEHLNGATFN 718
Query: 510 EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
+ ++ GK + K+E E E + ++E + + +G
Sbjct: 719 DDKVWY---------------VGKAQRKSEREAELRAKFEQERKNKFEKFKG-------- 755
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
T LY+KNL+ + ++ ++ F + G I S V DP Q LS G
Sbjct: 756 -----------TNLYLKNLDDSVNDEKLKELFSEFGTITSCKVML--DP----QGLSKGS 798
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
GFV F T E +AL V+ + + + + R E +A
Sbjct: 799 GFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQRKEERKA 839
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G + S +A + GQ S GYGFVQF E+
Sbjct: 563 VFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNN----GQ--SKGYGFVQFEQEEAAQN 616
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A+K L +++ Q+ + R+ E K +NV V+N+ ++
Sbjct: 617 AIKRLNGMLINDKQVYVGLFVRHQERNRGNGSPKFTNV--------YVKNLSETTTDDDL 668
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
+ +F +G + + + SG+ + FGFV F + + A A++ L +T
Sbjct: 669 KNIFGKYGSITSAVVMRD--ASGMSKCFGFVNFQSSDSAAAAVEHLNGAT 716
>gi|326484107|gb|EGE08117.1| ribosome biogenesis [Trichophyton equinum CBS 127.97]
Length = 750
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 169/382 (44%), Gaps = 50/382 (13%)
Query: 301 SGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
SG+ + N N+ A+ K+ D+ Q ++ +FVR+L T T + LT+ F +
Sbjct: 13 SGSFKMDENVPTGNLAAE--KTAPDAEQAPAKERKTRTLFVRSLPTTATTESLTEYFSQS 70
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
PL + +D +T ++KG+ VTF E A A + L+ +VF G+ + + +P+ E
Sbjct: 71 YPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAKELNNSVFEGKKIKIELAEPRHRE- 129
Query: 421 NVDGKVHCCISERKLDAFNQVVEARSKRI-------ILVKNLPYR-TLPTDLKALFEPFG 472
+D K + A ++ E + KR ++++NLP+ T P L+ LF +G
Sbjct: 130 -IDEKEGKSVPS---SAPSKAKELKEKRRLESLPPKLIIRNLPWSITEPQHLELLFRSYG 185
Query: 473 DLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEG----VFA 524
+ +VP G G V + A+ A + + L ++WA E
Sbjct: 186 KIKHAVVPKKGSRVAGFGFVVMRGRKNAERAIEGVNGKEVDGRTLAVDWAVEKDEWENMN 245
Query: 525 EAKEKSKGKEKEKNEEEGEEGE------EEKKENTAEEDNQQGVPEVEENVEEDEE---- 574
+A E+S GKE+ EE ++ + + ED + G E+ +N +ED +
Sbjct: 246 KAAEESDGKEEAGESEEAAAENEHLDVVDDGESDAISEDEEDGGVEL-DNEDEDGDISMG 304
Query: 575 -----------REPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
+ +T++I+NL F++T++++ HF K GP+ V P
Sbjct: 305 DAEDDELEEEEEDDRNASTIFIRNLPFSATDEALHEHFSKFGPVRYARVVL-----DPAT 359
Query: 624 FLSMGYGFVQFYTRESLNQALK 645
G FV FY E + ++
Sbjct: 360 ERPKGTAFVCFYKAEDASSCIR 381
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 23/208 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L +T +S+ +F + P+ TV DP++ S GYGFV F E
Sbjct: 48 TLFVRSLPTTATTESLTEYFSQSYPLKHATVVL--DPQTK---QSKGYGFVTFTDHEDAQ 102
Query: 642 QALKVLQNSSLDEHQIELK----RSNRNLESEATTVKRKSSNVAKQTGS---------KI 688
A K L NS + +I+++ R E E +V + + AK+ K+
Sbjct: 103 SAAKELNNSVFEGKKIKIELAEPRHREIDEKEGKSVPSSAPSKAKELKEKRRLESLPPKL 162
Query: 689 LVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
++RN+P+ + + +E LF+++G++K +PKK GS + GFGFV + A+RA++
Sbjct: 163 IIRNLPWSITEPQHLELLFRSYGKIKHAVVPKK--GSRVA-GFGFVVMRGRKNAERAIEG 219
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRK 775
+ + GR L ++WA E D E++ K
Sbjct: 220 V-NGKEVDGRTLAVDWAVEKDEWENMNK 246
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 36/222 (16%)
Query: 207 SDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFL 258
++ + P +AP +R+ T+ V++LP + L YF PL A+V
Sbjct: 29 AEKTAPDAEQAPAKERKTRTLFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSK 88
Query: 259 GMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G ++ F D ++ A + N S ++GK++ I + I
Sbjct: 89 GYGFVTFTDHEDAQSAAKELNNSVFEGKKIKI----------------ELAEPRHREIDE 132
Query: 318 KHWKSQEDSV-QFAEDIAESGR-------IFVRNLSYTVTE-DDLTKLFEKYGPLAEVIL 368
K KS S A+++ E R + +RNL +++TE L LF YG + ++
Sbjct: 133 KEGKSVPSSAPSKAKELKEKRRLESLPPKLIIRNLPWSITEPQHLELLFRSYGKIKHAVV 192
Query: 369 PIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
P K+ + GF V ++A +A + ++G GR L +
Sbjct: 193 P--KKGSRVAGFGFVVMRGRKNAERAIEGVNGKEVDGRTLAV 232
>gi|297739370|emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 176/433 (40%), Gaps = 96/433 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L + E L LF++ P+ + + D+ + G+A V F P+ AT A +HL
Sbjct: 15 LYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNALEHL 74
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + ++ H S RK N + +KNL
Sbjct: 75 NFTPLNGKPIRIM-------------FSHRDPSIRKSGFAN----------VFIKNL--- 108
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL + F G VL + G V+F Q+ A+ A L +
Sbjct: 109 DPSIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLIND 168
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G+F +E+++G G P+
Sbjct: 169 KQVYV-----GLFVRHQERNRGN---------------------------GSPKF----- 191
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
T +Y+KNL+ +T+D ++ F K G I S V R +S +G
Sbjct: 192 ----------TNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASG------MSKCFG 235
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQI-----ELKRSNRNLESEATTVKRKSSNVAKQTG 685
FV F + +S A++ L ++ ++ ++ ++S R E A + + + K G
Sbjct: 236 FVNFQSSDSAAAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKG 295
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ + ++N+ +++ELF FG + ++ + GL +G GFV F+T EA RA+
Sbjct: 296 TNLYLKNLDDSVNDEKLKELFSEFGTITSCKV--MLDPQGLSKGSGFVAFLTPEEATRAL 353
Query: 746 KALCQSTHLYGRR 758
+ + + GR+
Sbjct: 354 NVM--NGKMIGRK 364
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 173/461 (37%), Gaps = 111/461 (24%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------FLGMAYIGFKDEKNCNKAL-N 276
++ V +L + + L F+ + P+ S+R LG AY+ F ++ AL +
Sbjct: 14 SLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNALEH 73
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N + GK + I +D S + SG A+
Sbjct: 74 LNFTPLNGKPIRIMFSHRDPSIRKSGFAN------------------------------- 102
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
+F++NL ++ L F +G + + +D ++KG+ V F E A A +
Sbjct: 103 --VFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDN-NGQSKGYGFVQFEQEEAAQNAIK 159
Query: 397 HLDGTVFLGRMLH--LIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKN 454
L+G + + ++ L + N GN K F V VKN
Sbjct: 160 RLNGMLINDKQVYVGLFVRHQERNRGNGSPK------------FTNV---------YVKN 198
Query: 455 LPYRTLPTDLKALFEPFGDLGRVLV--PPYGIT---GLVEFLQKNQAKAAFNSLAYTKFK 509
L T DLK +F +G + +V G++ G V F + A AA L F
Sbjct: 199 LSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAAAVEHLNGATFN 258
Query: 510 EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
+ ++ GK + K+E E E + ++E + + +G
Sbjct: 259 DDKVWY---------------VGKAQRKSEREAELRAKFEQERKNKFEKFKG-------- 295
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
T LY+KNL+ + ++ ++ F + G I S V DP Q LS G
Sbjct: 296 -----------TNLYLKNLDDSVNDEKLKELFSEFGTITSCKVML--DP----QGLSKGS 338
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
GFV F T E +AL V+ + + + + R E +A
Sbjct: 339 GFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQRKEERKA 379
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T+ +KNL++N +D ++ F++CG I SV V + S G+GF+ F T +++
Sbjct: 289 TIIVKNLSWNVDDDWLKTEFEECGEIVSVRVQLDRQ-----SGRSRGFGFIDFSTSDAVA 343
Query: 642 QALKVLQNSSLDEHQIELKRSN---RNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL+ +Q +D I + ++ RN ++ A K + + I V N+ F A
Sbjct: 344 KALETMQGKEVDGRAIAVDKTESNPRNTQARAA----KFGDTPSEPSQTIFVGNVAFSAD 399
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
+ + + F +G ++ VRLP +G +GF +VEF + A A +A + + GR
Sbjct: 400 EDALWQTFADYGAVRSVRLPTDRE-TGQPKGFAYVEFEDQAGATAAFEAGKEGLEIGGRP 458
Query: 759 LVLEWAEEADN 769
+ L++++ DN
Sbjct: 459 VRLDYSQPRDN 469
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I V+NLS+ V +D L FE+ G + V + +D+++ +++GF + F + +A + +
Sbjct: 290 IIVKNLSWNVDDDWLKTEFEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKALETM 349
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
G GR + + K + N N + F S + I V N+ +
Sbjct: 350 QGKEVDGRAIAV--DKTESNPRNTQARAA---------KFGDTPSEPS-QTIFVGNVAFS 397
Query: 459 TLPTDLKALFEPFGDLG---RVLVPPYGITG------LVEFLQKNQAKAAFNS 502
D AL++ F D G V +P TG VEF + A AAF +
Sbjct: 398 ---ADEDALWQTFADYGAVRSVRLPTDRETGQPKGFAYVEFEDQAGATAAFEA 447
>gi|326469986|gb|EGD93995.1| ribosome biogenesis protein Nop4 [Trichophyton tonsurans CBS
112818]
Length = 739
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 154/344 (44%), Gaps = 48/344 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T T + LT+ F + PL + +D +T ++KG+ VTF E A A + L
Sbjct: 32 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAKEL 91
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-------IL 451
+ +VF G+ + + +P+ E +D K + A ++ E + KR ++
Sbjct: 92 NNSVFEGKKIKIELAEPRHRE--IDEKEGKSVPS---SAPSKAKELKEKRRLESLPPKLI 146
Query: 452 VKNLPYR-TLPTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYT 506
++NLP+ T P L+ LF +G + +VP G G V + A+ A +
Sbjct: 147 IRNLPWSITEPQHLELLFRSYGKIKHAVVPKKGSRVAGFGFVVMRGRKNAERAIEGVNGK 206
Query: 507 KFKEVPLYLEWAPEG----VFAEAKEKSKGKEKEKNEEEGEEGE------EEKKENTAEE 556
+ L ++WA E +A E+S GKE+ EE ++ + + E
Sbjct: 207 EVDGRTLAVDWAVEKDEWENMNKAAEESDGKEEAGESEEAAAENEHLDVVDDGESDAISE 266
Query: 557 DNQQGVPEVEENVEED---------------EEREPEPDTTLYIKNLNFNSTEDSIRRHF 601
D + G E+ +N +ED EE + +T++I+NL F++T++++ HF
Sbjct: 267 DEEDGGVEL-DNEDEDGNISMGDAEDDELEEEEEDDRNASTIFIRNLPFSATDEALHEHF 325
Query: 602 KKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK 645
K GP+ V P G FV FY E + ++
Sbjct: 326 SKFGPVRYARVV-----LDPATERPKGTAFVCFYKAEDASSCIR 364
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 23/208 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L +T +S+ +F + P+ TV DP++ S GYGFV F E
Sbjct: 31 TLFVRSLPTTATTESLTEYFSQSYPLKHATVVL--DPQTK---QSKGYGFVTFTDHEDAQ 85
Query: 642 QALKVLQNSSLDEHQIELK----RSNRNLESEATTVKRKSSNVAKQTGS---------KI 688
A K L NS + +I+++ R E E +V + + AK+ K+
Sbjct: 86 SAAKELNNSVFEGKKIKIELAEPRHREIDEKEGKSVPSSAPSKAKELKEKRRLESLPPKL 145
Query: 689 LVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
++RN+P+ + + +E LF+++G++K +PKK GS + GFGFV + A+RA++
Sbjct: 146 IIRNLPWSITEPQHLELLFRSYGKIKHAVVPKK--GSRVA-GFGFVVMRGRKNAERAIEG 202
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRK 775
+ + GR L ++WA E D E++ K
Sbjct: 203 V-NGKEVDGRTLAVDWAVEKDEWENMNK 229
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 36/222 (16%)
Query: 207 SDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFL 258
++ + P +AP +R+ T+ V++LP + L YF PL A+V
Sbjct: 12 AEKTAPDAEQAPAKERKTRTLFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSK 71
Query: 259 GMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G ++ F D ++ A + N S ++GK++ I + I
Sbjct: 72 GYGFVTFTDHEDAQSAAKELNNSVFEGKKIKI----------------ELAEPRHREIDE 115
Query: 318 KHWKSQEDSV-QFAEDIAESGR-------IFVRNLSYTVTE-DDLTKLFEKYGPLAEVIL 368
K KS S A+++ E R + +RNL +++TE L LF YG + ++
Sbjct: 116 KEGKSVPSSAPSKAKELKEKRRLESLPPKLIIRNLPWSITEPQHLELLFRSYGKIKHAVV 175
Query: 369 PIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
P K+ + GF V ++A +A + ++G GR L +
Sbjct: 176 P--KKGSRVAGFGFVVMRGRKNAERAIEGVNGKEVDGRTLAV 215
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 31/238 (13%)
Query: 537 KNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDS 596
K + E E + KK T + + QG P L++ NL++N E+
Sbjct: 241 KRKAEAEATQTTKKSKTEQNGDAQGSP------------------NLFVGNLSWNVDEEW 282
Query: 597 IRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQ 656
+ R F++ GP A V + + S G+G+V+F T E+ AL + + LD
Sbjct: 283 LGREFEEFGPKAVRIVTDRATGR------SKGFGYVEFETVEAATAALNAKKGTDLDNRP 336
Query: 657 IELKRS-----NRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGE 711
+ L S +N A++ + +V + + V N+ F A V E+F+ +G
Sbjct: 337 LNLDFSTPRPEGQNPRDRASSRASQHGDVPSRPSDTLFVGNLSFDATPDSVTEIFQEYGT 396
Query: 712 LKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN 769
+ V LP K G+ +GFG+V F + EA+ A +AL Q L GR + L++A DN
Sbjct: 397 ITRVSLPTKPE-DGMPKGFGYVGFSSVEEAQGAFEAL-QGAELNGRSMRLDFAAPRDN 452
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV NLS+ T D +T++F++YG + V LP E KGF V F E A A++ L
Sbjct: 373 LFVGNLSFDATPDSVTEIFQEYGTITRVSLPTKPEDGMPKGFGYVGFSSVEEAQGAFEAL 432
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
G GR + L P++N
Sbjct: 433 QGAELNGRSMRLDFAAPRDN 452
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 175/424 (41%), Gaps = 96/424 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +V + L +F + G + V + D T + G+A V F P A +A + L
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAMEML 103
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + ++ N D S RK A N I +KNL
Sbjct: 104 NFTPVNGKPIRIM-------YSNRD------PSSRKSGAAN----------IFIKNLDKS 140
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KALF+ F G +L G V++ Q A+ A N L +
Sbjct: 141 I---DNKALFDTFSAFGTILSCKVATEISGESKGYGFVQYEQDESAQNAINELNGMLLND 197
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G F +E+ +N G P+
Sbjct: 198 KKVYV-----GPFVRKQER---------------------------ENVFGSPKF----- 220
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
+Y+KNL+ ++TED+++ F K GPI SV V R D K S +G
Sbjct: 221 ----------NNVYVKNLSESTTEDNLKEMFGKFGPITSVIVVRADDGK------SRCFG 264
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT-----G 685
FV F + +A++ L LD+ ++ + R+ + E E +K K K+T G
Sbjct: 265 FVNFENPDDAARAVEDLNGKKLDDKELYVGRAQKKSERE-MQLKEKFEKSNKETADKNQG 323
Query: 686 SKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ + ++N+ E ++ELF FG + ++ + +G+++G GFV F + +A RA
Sbjct: 324 TNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD--SNGVNKGSGFVAFKSSEDASRA 381
Query: 745 MKAL 748
+ A+
Sbjct: 382 LVAM 385
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+ + + + F + G + SV V R + + +S+GY +V F +
Sbjct: 42 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTR-----MSLGYAYVNFSSPADA 96
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A+++L + ++ I + SNR+ S RKS + I ++N+
Sbjct: 97 ARAMEMLNFTPVNGKPIRIMYSNRDPSS------RKSG------AANIFIKNLDKSIDNK 144
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ ++ SG +G+GFV++ A+ A+ L
Sbjct: 145 ALFDTFSAFGTILSCKVATEI--SGESKGYGFVQYEQDESAQNAINEL 190
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T+++ L++N +D + F +CG + S AR ++ G+ S G+G V+F S+
Sbjct: 344 TIFVGRLSWNVDDDQLASEFAECGEVVS---ARVNIDRNTGK--SRGFGHVEFADASSVQ 398
Query: 642 QALKVLQNSSLDEHQIELKRS---NRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+A+ + +D + + R+ N+N + E S A S + V N+ + A
Sbjct: 399 KAIDTMNGKEIDGRPVNVDRAPGLNKNQQRENRAKAFGDSTSAPS--SVLFVGNLSWDAT 456
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
+ V E F GE+K VRLP SG +GFG+VEF+ + AK A +AL T + GR
Sbjct: 457 EDAVWEAFGEHGEVKSVRLPTDRE-SGRPKGFGYVEFVDVDAAKAAFEALS-GTEIGGRS 514
Query: 759 LVLEWAEEADN 769
+ L++++ DN
Sbjct: 515 IRLDYSQPRDN 525
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 39/237 (16%)
Query: 198 KTKSKDTAPS--------DPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLP 249
K K++D APS D S P + + TI V L V L + F
Sbjct: 312 KRKAEDDAPSASKKTKLADGSAAPAE----QEEESKTIFVGRLSWNVDDDQLASEFAECG 367
Query: 250 -LASVRTTF-------LGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYS 301
+ S R G ++ F D + KA++ GK+++ + D +
Sbjct: 368 EVVSARVNIDRNTGKSRGFGHVEFADASSVQKAIDT----MNGKEIDGRPVNVDRAPGL- 422
Query: 302 GAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYG 361
N N EN +AK + DS A S +FV NLS+ TED + + F ++G
Sbjct: 423 -----NKNQQREN-RAKAFG---DSTS-----APSSVLFVGNLSWDATEDAVWEAFGEHG 468
Query: 362 PLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
+ V LP D+E+ + KGF V F+ + A A++ L GT GR + L +P++N
Sbjct: 469 EVKSVRLPTDRESGRPKGFGYVEFVDVDAAKAAFEALSGTEIGGRSIRLDYSQPRDN 525
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 28/214 (13%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
+K K + S AE ES IFV LS+ V +D L F + G + + ID+ T K
Sbjct: 323 SKKTKLADGSAAPAEQEEESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGK 382
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL--IPGKPKENEGNVDGKVHCCISERK 434
++GF V F +A ++G GR +++ PG K + E +
Sbjct: 383 SRGFGHVEFADASSVQKAIDTMNGKEIDGRPVNVDRAPGLNKNQQ-----------RENR 431
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRV---LVP-------PYGI 484
AF A S ++ V NL + A++E FG+ G V +P P G
Sbjct: 432 AKAFGDSTSAPSS-VLFVGNLSWDATE---DAVWEAFGEHGEVKSVRLPTDRESGRPKGF 487
Query: 485 TGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
G VEF+ + AKAAF +L+ T+ + L+++
Sbjct: 488 -GYVEFVDVDAAKAAFEALSGTEIGGRSIRLDYS 520
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P + L++ NL++++TED++ F + G + SV + ++ P G+G+V+F +
Sbjct: 442 PSSVLFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRP-----KGFGYVEFVDVD 496
Query: 639 SLNQALKVLQNSSLDEHQIELKRS 662
+ A + L + + I L S
Sbjct: 497 AAKAAFEALSGTEIGGRSIRLDYS 520
>gi|261193242|ref|XP_002623027.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis
SLH14081]
gi|239589162|gb|EEQ71805.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis
SLH14081]
gi|327356849|gb|EGE85706.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis ATCC
18188]
Length = 744
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT+ F + PL + +D +T ++KG+ VTF E A +A +
Sbjct: 51 LFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALEEF 110
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G+VF G+ L + +P+ E + G S K + N+ ++A+ ++I ++NLP+
Sbjct: 111 NGSVFDGKKLKIEVAEPRHREIDEKGGKSVSTSNLKQERENRKLQAQPPKLI-IRNLPWS 169
Query: 459 TL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
P L ALF FG + ++P G G V + A+ A ++ + L
Sbjct: 170 IAEPDQLAALFRSFGKVKHAVIPKRGTQHSGFGFVVLRGRKNAEKALEAVNGKEIDGRTL 229
Query: 514 YLEWAPE 520
++WA E
Sbjct: 230 AVDWAVE 236
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 20/196 (10%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L ++T +S+ +F + P+ TV DP++ S GYGFV F E
Sbjct: 50 TLFVRSLPASATTESLTEYFSQSYPLKHATVVL--DPQTK---QSKGYGFVTFADHEDAA 104
Query: 642 QALKVLQNSSLDEHQIELKRSN-RNLESEATTVKRKSSNVAKQTGS---------KILVR 691
+AL+ S D +++++ + R+ E + K S++ KQ K+++R
Sbjct: 105 KALEEFNGSVFDGKKLKIEVAEPRHREIDEKGGKSVSTSNLKQERENRKLQAQPPKLIIR 164
Query: 692 NIPFQ-AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQ 750
N+P+ A+ ++ LF++FG++K +PK+ H GFGFV + A++A++A+
Sbjct: 165 NLPWSIAEPDQLAALFRSFGKVKHAVIPKRGT---QHSGFGFVVLRGRKNAEKALEAV-N 220
Query: 751 STHLYGRRLVLEWAEE 766
+ GR L ++WA E
Sbjct: 221 GKEIDGRTLAVDWAVE 236
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 31/200 (15%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFLGMAYIGFKDEKNCNKALN 276
T+ V++LPA + L YF PL A+V G ++ F D ++ KAL
Sbjct: 49 RTLFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALE 108
Query: 277 K-NKSFWKGKQLNIY----KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE 331
+ N S + GK+L I ++ + + + N EN K +
Sbjct: 109 EFNGSVFDGKKLKIEVAEPRHREIDEKGGKSVSTSNLKQERENRKLQ------------- 155
Query: 332 DIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
A+ ++ +RNL +++ E D L LF +G + ++P K + GF V ++
Sbjct: 156 --AQPPKLIIRNLPWSIAEPDQLAALFRSFGKVKHAVIP--KRGTQHSGFGFVVLRGRKN 211
Query: 391 ATQAYQHLDGTVFLGRMLHL 410
A +A + ++G GR L +
Sbjct: 212 AEKALEAVNGKEIDGRTLAV 231
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IF+RNL ++ T++ L + F ++GPL + +D ETD+ +G A V F E A
Sbjct: 325 IFIRNLPFSATDETLYEHFVQFGPLRYARVVVDPETDRPRGTAFVCFWKHEDA 377
>gi|425781538|gb|EKV19498.1| Ribosome biogenesis (Nop4), putative [Penicillium digitatum PHI26]
gi|425782769|gb|EKV20659.1| Ribosome biogenesis (Nop4), putative [Penicillium digitatum Pd1]
Length = 722
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L ++T +S+ HF + I V K+ K +S G+GFV F E
Sbjct: 37 TLFVRSLPTSATTESLAEHFSQSYIIKHAVVVSDKETK-----VSKGFGFVTFADVEDAE 91
Query: 642 QALKVLQNSSLDEHQIEL-----------KRSNRNLESEATTVKRKSSNVAKQTG--SKI 688
ALK S D I + ++ R++ + A+ +K + G K+
Sbjct: 92 SALKEFNGSKFDGKIIRVDYAESRKREIDEKIGRSVPTAASRESKKQKEEERGQGLPPKL 151
Query: 689 LVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
+VRN+P+ K+ E + LF++FG++KFV LPK+ +G GFGFV + A++A++
Sbjct: 152 IVRNLPWSVKEPEDLNVLFRSFGKVKFVTLPKR---NGKLSGFGFVTMRGRKNAEKALQ- 207
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRK 775
+ + GR++ ++WA E D E I+K
Sbjct: 208 MINGKEIDGRQIAVDWAVEKDVWETIKK 235
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 153/331 (46%), Gaps = 31/331 (9%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + L + F + + ++ DKET +KGF VTF E A A +
Sbjct: 38 LFVRSLPTSATTESLAEHFSQSYIIKHAVVVSDKETKVSKGFGFVTFADVEDAESALKEF 97
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCI-SERKLDAFNQVVEARSKRI---ILVKN 454
+G+ F G+++ + + ++ E +D K+ + + ++ Q E R + + ++V+N
Sbjct: 98 NGSKFDGKIIRVDYAESRKRE--IDEKIGRSVPTAASRESKKQKEEERGQGLPPKLIVRN 155
Query: 455 LPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFK 509
LP+ P DL LF FG + V +P G V + A+ A + +
Sbjct: 156 LPWSVKEPEDLNVLFRSFGKVKFVTLPKRNGKLSGFGFVTMRGRKNAEKALQMINGKEID 215
Query: 510 EVPLYLEWAPE-GVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN 568
+ ++WA E V+ K++ +E ++ E+E + E E E EE + E++
Sbjct: 216 GRQIAVDWAVEKDVWETIKKEDAEEEGQREEQESDNVEMEDAEGILEEPSDDETSSDEDD 275
Query: 569 VEEDEEREPEPD-------------TTLYIKNLNFNSTEDSIRRHFKK-CGPIASVTVAR 614
E+D+ E + TT++I+NL F++T+ ++ HFK GP+ V
Sbjct: 276 DEDDDLDELDELDDDEAEEEDDRNATTIFIRNLPFSATDQALYDHFKTHFGPLRYARVVL 335
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQALK 645
+ + P G GFV F+ E N ++
Sbjct: 336 DYETERP-----RGTGFVCFWKPEDANTCIR 361
>gi|453088735|gb|EMF16775.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 761
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 145/345 (42%), Gaps = 46/345 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T D LT+LF P+ ID ET KG+ VTF E A QA
Sbjct: 54 LFVRSLPASTTNDQLTELFSDAFPVKHATAVIDPETKLCKGYGFVTFADAEDAAQAKAQF 113
Query: 399 DGTVFLGRMLHLIPGKPKENEGNV--DGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
+G G+ L + +P+ + +GK +RK +V ++V+NLP
Sbjct: 114 NGHELGGKKLRIEVAEPRSRDSKAKDEGKESVGQLKRKE---AEVERQHQPSKLIVRNLP 170
Query: 457 YRTL-PTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYTKFKE 510
+ P L+ LF+ +G + + VP G G V + A+ A + +
Sbjct: 171 WSIKGPKQLEKLFQSYGKIKKAYVPQKGPGLMAGFGFVIMRGRKNAEKAIEGVNGKEING 230
Query: 511 VPLYLEWAPE-GVFAEAKEKSKGKEKEKNEEEGEE-------------------GEEEKK 550
L ++WA E VF E + +G E E E GE+ E+ +
Sbjct: 231 RTLAVDWAVEKDVFEENADADEGNEAEDAEHMGEDLTGEDEDDDIEAEGEEGEEEEDAYE 290
Query: 551 ENTAEEDNQQGVPEVEE----------NVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRH 600
EN + +D + +E N + E + +P TTL+I+NL F T++ + H
Sbjct: 291 ENGSADDASEDSDTLEGDDDDDGEGDWNDRQHENADDKP-TTLFIRNLPFTCTDEDLEDH 349
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK 645
F++ S AR G+ S G GFV FY + + L+
Sbjct: 350 FREH--FGSTRYARVVMDHGTGR--SKGTGFVCFYDKADADGCLR 390
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 19/213 (8%)
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
E +++ + +L++++L ++T D + F P+ T DP++ L GYG
Sbjct: 42 EQQKQATQKRCSLFVRSLPASTTNDQLTELFSDAFPVKHATAV--IDPETK---LCKGYG 96
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSN-RNLESEA--------TTVKRKSSNVA 681
FV F E QA L ++ ++ + R+ +S+A +KRK + V
Sbjct: 97 FVTFADAEDAAQAKAQFNGHELGGKKLRIEVAEPRSRDSKAKDEGKESVGQLKRKEAEVE 156
Query: 682 KQ-TGSKILVRNIPFQAKQ-SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
+Q SK++VRN+P+ K ++E+LF+++G++K +P+K G GL GFGFV +
Sbjct: 157 RQHQPSKLIVRNLPWSIKGPKQLEKLFQSYGKIKKAYVPQK--GPGLMAGFGFVIMRGRK 214
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWAEEADNVED 772
A++A++ + + GR L ++WA E D E+
Sbjct: 215 NAEKAIEGV-NGKEINGRTLAVDWAVEKDVFEE 246
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 102/191 (53%), Gaps = 14/191 (7%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+TL++ L++N E+ + R F++ G +AS + ++ S G+GFV+F + +
Sbjct: 1 STLFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGK-----SKGFGFVEFKSVDGA 55
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN-------VAKQTGSKILVRNI 693
+A++ Q +D + L + ++ T +++SS+ V K+ S + V N+
Sbjct: 56 IKAVEGKQGGEIDGRNVRLDFTEGRSQNNQRTPQQRSSDRAGKFGDVPKEPSSTLFVGNV 115
Query: 694 PFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTH 753
F A + V E+F +G +K VRLP +G +GFG+VE + ++AK A +AL Q
Sbjct: 116 SFDANEDMVTEVFSEYGSIKAVRLPTDR-DTGALKGFGYVEMFSIDDAKVAFEAL-QGAE 173
Query: 754 LYGRRLVLEWA 764
+ GR + L+++
Sbjct: 174 IAGRSIRLDYS 184
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 311 SMENIKAKHWKSQEDSVQFAEDIAE-SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP 369
S N + +S + + +F + E S +FV N+S+ ED +T++F +YG + V LP
Sbjct: 81 SQNNQRTPQQRSSDRAGKFGDVPKEPSSTLFVGNVSFDANEDMVTEVFSEYGSIKAVRLP 140
Query: 370 IDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
D++T KGF V + A A++ L G GR + L PK
Sbjct: 141 TDRDTGALKGFGYVEMFSIDDAKVAFEALQGAEIAGRSIRLDYSTPK 187
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV LS+ V E+ L + FE++G LA + D+ET K+KGF V F + A +A +
Sbjct: 3 LFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVEGK 62
Query: 399 DGTVFLGRMLHL--IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
G GR + L G+ + N+ + S + F V + S + V N+
Sbjct: 63 QGGEIDGRNVRLDFTEGRSQNNQ-----RTPQQRSSDRAGKFGDVPKEPSS-TLFVGNVS 116
Query: 457 YRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYTKFKE 510
+ + +F +G + V +P T G VE + AK AF +L +
Sbjct: 117 FDANEDMVTEVFSEYGSIKAVRLPTDRDTGALKGFGYVEMFSIDDAKVAFEALQGAEIAG 176
Query: 511 VPLYLEWA 518
+ L+++
Sbjct: 177 RSIRLDYS 184
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
EP +TL++ N++F++ ED + F + G I +V + +D + G+G+V+ ++
Sbjct: 105 EPSSTLFVGNVSFDANEDMVTEVFSEYGSIKAVRLPTDRDTGAL-----KGFGYVEMFSI 159
Query: 638 ESLNQALKVLQNSSLDEHQIELKRS 662
+ A + LQ + + I L S
Sbjct: 160 DDAKVAFEALQGAEIAGRSIRLDYS 184
>gi|242766029|ref|XP_002341092.1| ribosome biogenesis (Nop4), putative [Talaromyces stipitatus ATCC
10500]
gi|218724288|gb|EED23705.1| ribosome biogenesis (Nop4), putative [Talaromyces stipitatus ATCC
10500]
Length = 715
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 153/333 (45%), Gaps = 45/333 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT F + + + ID ET ++KG+ VTF E A +A +
Sbjct: 49 LFVRSLPASATTEKLTGFFSQSYVIKHATVVIDPETKQSKGYGFVTFADIEDAQRALEEF 108
Query: 399 DGTVFLGRMLHLIPGKPKENE-GNVDGKVHCCISERKLDA--FNQVVEARSKRIILVKNL 455
+G F GR + + +P++ E +GK +L A Q + + ++I V+NL
Sbjct: 109 NGVEFEGRKIKVEVAQPRKREIDEKEGKSVPTAEAARLKAERTKQREQTQPPKLI-VRNL 167
Query: 456 PYRTLPTD-LKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKE 510
P+ +D L ALF FG + +VP G G V + A+ A ++ +
Sbjct: 168 PWTIKDSDQLAALFRSFGKVKHAVVPKKGNVQAGFGFVVLRGRKNAEKALEAVNGKEIDG 227
Query: 511 VPLYLEWAPE-GVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE------------NTAEED 557
L ++WA E V+ EA++ + EK +E+ E ++ K + A ED
Sbjct: 228 RTLAVDWAVEKNVWEEAQQTA-----EKKDEDAMEVDDAKSDEAGAEDEEDESVGVASED 282
Query: 558 NQQGVPEVEENVEEDEEREPEP-----DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
+ E++ +ED+E + +T++I+NL F +T++S+ HFK+ GP+
Sbjct: 283 GDEEGSFDEDDEDEDDEDDEGEEDDRNSSTIFIRNLPFTTTDESLYEHFKQFGPLRYAQR 342
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK 645
R G GFV F+ E + L+
Sbjct: 343 PR-------------GTGFVCFWKAEDAIECLR 362
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 104/204 (50%), Gaps = 23/204 (11%)
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
P+ L++++L ++T + + F + I TV DP++ S GYGFV F
Sbjct: 43 PQMRRELFVRSLPASATTEKLTGFFSQSYVIKHATVV--IDPETK---QSKGYGFVTFAD 97
Query: 637 RESLNQALKVLQNSSLDEHQIELKRSN---RNLE---------SEATTVKRKSSNVAKQT 684
E +AL+ + +I+++ + R ++ +EA +K + + +QT
Sbjct: 98 IEDAQRALEEFNGVEFEGRKIKVEVAQPRKREIDEKEGKSVPTAEAARLKAERTKQREQT 157
Query: 685 GS-KILVRNIPFQAKQS-EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
K++VRN+P+ K S ++ LF++FG++K +PKK + GFGFV + A+
Sbjct: 158 QPPKLIVRNLPWTIKDSDQLAALFRSFGKVKHAVVPKK---GNVQAGFGFVVLRGRKNAE 214
Query: 743 RAMKALCQSTHLYGRRLVLEWAEE 766
+A++A+ + GR L ++WA E
Sbjct: 215 KALEAV-NGKEIDGRTLAVDWAVE 237
>gi|432957822|ref|XP_004085896.1| PREDICTED: probable RNA-binding protein 19-like, partial [Oryzias
latipes]
Length = 278
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 3/128 (2%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +E+ + F GT+TD LK+T +GKFR+F F+G+ E+ A AL +FN ++V +SR+
Sbjct: 82 MKEERFSSMFAAFGTLTDCSLKFTKDGKFRKFGFVGFKSEEDASRALKHFNRSFVDTSRV 141
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQD-LKPEHTKDSKPGKKS-KNDPT 146
VE C GD TK K+WSK+ S+ +K AP + K KD+ G + + D
Sbjct: 142 TVEICKAFGDPTKGKAWSKHT-QSAGQEKPSGPAPTEGKKKKNQKKDTAIGLGNLEEDQE 200
Query: 147 FSDFLQLH 154
F +FL +H
Sbjct: 201 FKEFLSVH 208
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 679 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
+ A T S+++V+N+P K+ +F AFG L L K G R FGFV F ++
Sbjct: 64 STAISTMSRLIVKNLPNGMKEERFSSMFAAFGTLTDCSL--KFTKDGKFRKFGFVGFKSE 121
Query: 739 NEAKRAMKALCQS 751
+A RA+K +S
Sbjct: 122 EDASRALKHFNRS 134
>gi|147785105|emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 173/433 (39%), Gaps = 96/433 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L + E L LF++ P+ + + D+ + G+A V F P+ AT A +HL
Sbjct: 41 LYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNALEHL 100
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + ++ H S RK N + +KNL
Sbjct: 101 NFTPLNGKPIRIM-------------FSHRDPSIRKSGFAN----------VFIKNLDPS 137
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL + F G VL + G V+F Q+ A+ A L +
Sbjct: 138 I---DNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLIND 194
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G+F +E++ G G P+
Sbjct: 195 KQVYV-----GLFVRHQERNXGN---------------------------GSPKF----- 217
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
T +Y+KNL+ +T+D ++ F K G I S V R +S +G
Sbjct: 218 ----------TNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASG------MSKCFG 261
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQI-----ELKRSNRNLESEATTVKRKSSNVAKQTG 685
FV F + +S A++ L ++ ++ ++ ++S R E A + + + K G
Sbjct: 262 FVNFQSSDSAAAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKG 321
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ ++N+ ++ ELF FG + ++ + GL +G GFV F+T EA RA+
Sbjct: 322 XNLYLKNLDDSVNDEKLXELFSEFGTITSCKV--MLDPQGLSKGSGFVAFLTPEEATRAL 379
Query: 746 KALCQSTHLYGRR 758
+ + + GR+
Sbjct: 380 NVM--NGKMIGRK 390
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NLS T T+DDL +F KYG + ++ D + +K F V F + A A +HL
Sbjct: 220 VYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDA-SGMSKCFGFVNFQSSDSAAAAVEHL 278
Query: 399 DGTVFLGRMLHLIPGKPK---ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+G F + + GK + E E + K ERK N+ + + + L KNL
Sbjct: 279 NGATFNDDKVWYV-GKAQRKSEREAELRAKFE---QERK----NKFEKFKGXNLYL-KNL 329
Query: 456 PYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTKFKE 510
L LF FG + +V++ P G+ +G V FL +A A N +
Sbjct: 330 DDSVNDEKLXELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGR 389
Query: 511 VPLYLEWA 518
PLY+ A
Sbjct: 390 KPLYVAVA 397
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 171/461 (37%), Gaps = 111/461 (24%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------FLGMAYIGFKDEKNCNKAL-N 276
++ V +L + + L F+ + P+ S+R LG AY+ F ++ AL +
Sbjct: 40 SLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNALEH 99
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N + GK + I +D S + SG A+
Sbjct: 100 LNFTPLNGKPIRIMFSHRDPSIRKSGFAN------------------------------- 128
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
+F++NL ++ L F +G + + +D ++KG+ V F E A A +
Sbjct: 129 --VFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNN-GQSKGYGFVQFEQEEAAQNAIK 185
Query: 397 HLDGTVFLGRMLH--LIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKN 454
L+G + + ++ L + N GN K F V VKN
Sbjct: 186 RLNGMLINDKQVYVGLFVRHQERNXGNGSPK------------FTNV---------YVKN 224
Query: 455 LPYRTLPTDLKALFEPFGDLGRVLV--PPYGIT---GLVEFLQKNQAKAAFNSLAYTKFK 509
L T DLK +F +G + +V G++ G V F + A AA L F
Sbjct: 225 LSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAAAVEHLNGATFN 284
Query: 510 EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
+ ++ GK + K+E E E + ++E + + +G
Sbjct: 285 DDKVWY---------------VGKAQRKSEREAELRAKFEQERKNKFEKFKG-------- 321
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
LY+KNL+ + ++ + F + G I S V DP Q LS G
Sbjct: 322 -----------XNLYLKNLDDSVNDEKLXELFSEFGTITSCKVML--DP----QGLSKGS 364
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
GFV F T E +AL V+ + + + + R E +A
Sbjct: 365 GFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQRKEERKA 405
>gi|440639411|gb|ELR09330.1| hypothetical protein GMDG_03896 [Geomyces destructans 20631-21]
Length = 839
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 13/195 (6%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L TVT D LTKLF + PL + +D ET ++KG+ VTF E A +A +
Sbjct: 44 LFVRSLPATVTSDALTKLFSESYPLKHATVVLDPETKQSKGYGFVTFADAEDAERAKEEF 103
Query: 399 DGTVFLGRMLHLIPGKPKENE----GNVDGKVHCCISERKLDA----FNQVVEARSKRII 450
G F GR L + +P+ + GK IS A ++VE R +
Sbjct: 104 HGKAFQGRKLKVEVAEPRHRDVDSGKGAGGKRTSIISTEAAAAKTKRSEKMVEDRKPPKL 163
Query: 451 LVKNLPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAY 505
+++NLP+ P DL+ LF+ FG + V +P T G V + A+ A ++
Sbjct: 164 IIRNLPWSIKDPKDLELLFQKFGKVKHVTLPKVKDTQAGFGFVVMRGRKNAEKALEAVNG 223
Query: 506 TKFKEVPLYLEWAPE 520
L ++WA E
Sbjct: 224 NLIDGRILAVDWAVE 238
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 38/252 (15%)
Query: 542 GEEGEEEKKENTAE-----EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDS 596
GE + ++ E AE DN+ EV N + +E +L++++L T D+
Sbjct: 2 GERQKRQRPEGEAEAAFLQSDNE----EVSPNKKARKETNASARRSLFVRSLPATVTSDA 57
Query: 597 IRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQ 656
+ + F + P+ TV DP++ S GYGFV F E +A + + +
Sbjct: 58 LTKLFSESYPLKHATVVL--DPETK---QSKGYGFVTFADAEDAERAKEEFHGKAFQGRK 112
Query: 657 IEL-------------------KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
+++ + S + E+ A KR V + K+++RN+P+
Sbjct: 113 LKVEVAEPRHRDVDSGKGAGGKRTSIISTEAAAAKTKRSEKMVEDRKPPKLIIRNLPWSI 172
Query: 698 KQ-SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
K ++E LF+ FG++K V LPK GFGFV + A++A++A+ + G
Sbjct: 173 KDPKDLELLFQKFGKVKHVTLPKV---KDTQAGFGFVVMRGRKNAEKALEAV-NGNLIDG 228
Query: 757 RRLVLEWAEEAD 768
R L ++WA E D
Sbjct: 229 RILAVDWAVEKD 240
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 327 VQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
QF D S +FVRNL +T + +L + F ++G + + +D+ TD+ KG V F
Sbjct: 357 AQFITD--NSSTLFVRNLPFTARDPELKEHFMQFGAVRYARVVMDRATDRPKGTGFVCFY 414
Query: 387 MPEHA 391
E A
Sbjct: 415 NVEDA 419
>gi|225441084|ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
vinifera]
gi|297740018|emb|CBI30200.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 176/424 (41%), Gaps = 93/424 (21%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A ++V +L +T+ L F ++ LA V + D + ++ + V F+ P+ A+
Sbjct: 9 AAPASLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASH 68
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + + T+ G+++ ++ S R DA + + VK
Sbjct: 69 AIEAKNHTMLHGKVIRVM------------------WSHRDPDARRSGIGN-----VFVK 105
Query: 454 NLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKF 508
NL L+A+F+ FG++ +V+V G + G V+F + A AA L
Sbjct: 106 NLSDSIDNVRLQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKL----- 160
Query: 509 KEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN 568
G + K+ GK
Sbjct: 161 -----------NGFIIDGKQIYAGK----------------------------------F 175
Query: 569 VEEDEEREPEPD---TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFL 625
V + + P PD T LYIKNL+ + TE+++R F + G IAS+ +++ ++ +
Sbjct: 176 VRKTDRVLPNPDAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDEN------GM 229
Query: 626 SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK----RKSSNVA 681
S G+GFV F + E +AL+ L L + + R+ + E E + +++ +
Sbjct: 230 SRGFGFVNFESPEDAKRALEALNGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQIL 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
K GS + V+NI ++ E F G++ +L + G+ +GFGFV F T +EA
Sbjct: 290 KYRGSNVYVKNIDDNVNDDDLREHFSVCGKITSAKLMRDQ--KGISKGFGFVCFSTPDEA 347
Query: 742 KRAM 745
+A+
Sbjct: 348 SKAV 351
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+++KNL+ + ++ F+K G I S V +D KS GYGFVQF + E N
Sbjct: 102 VFVKNLSDSIDNVRLQAMFQKFGNILSCKVVVTEDGKS------KGYGFVQFESEEYANA 155
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ L +D QI + R + K +N + ++N+ + +
Sbjct: 156 AIEKLNGFIIDGKQIYAGKFVRKTDRVLPNPDAKYTN--------LYIKNLDPDVTEEAL 207
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
E F FG++ + + K +G+ RGFGFV F + +AKRA++AL L + L +
Sbjct: 208 REKFFEFGKIASLVISKDE--NGMSRGFGFVNFESPEDAKRALEAL-NGLQLGSKVLYVA 264
Query: 763 WAEEADNVEDIRKR 776
A++ E + +R
Sbjct: 265 RAQKKAEREQLLRR 278
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 158/414 (38%), Gaps = 109/414 (26%)
Query: 250 LASVRTT-------FLGMAYIGFKDEKNCNKALN-KNKSFWKGKQLNIYKYSKDNSAKYS 301
LASVR L Y+ F ++ + A+ KN + GK + + +D A+ S
Sbjct: 38 LASVRICRDSSSGRSLCYGYVNFISPQDASHAIEAKNHTMLHGKVIRVMWSHRDPDARRS 97
Query: 302 GAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYG 361
G G +FV+NLS ++ L +F+K+G
Sbjct: 98 GI---------------------------------GNVFVKNLSDSIDNVRLQAMFQKFG 124
Query: 362 PLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGN 421
+ + + E K+KG+ V F E+A A + L+G +
Sbjct: 125 NILSCKV-VVTEDGKSKGYGFVQFESEEYANAAIEKLNGFI------------------- 164
Query: 422 VDGK-VHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP 480
+DGK ++ RK D +A+ + +KNL L+ F FG + +++
Sbjct: 165 IDGKQIYAGKFVRKTDRVLPNPDAKYTNL-YIKNLDPDVTEEALREKFFEFGKIASLVIS 223
Query: 481 P--YGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEK 535
G++ G V F AK A +L + LY+ A A++K+
Sbjct: 224 KDENGMSRGFGFVNFESPEDAKRALEALNGLQLGSKVLYV--------ARAQKKA----- 270
Query: 536 EKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTED 595
E E+ + E+ N+Q + NV Y+KN++ N +D
Sbjct: 271 --------EREQLLRRQFEEKRNEQILKYRGSNV--------------YVKNIDDNVNDD 308
Query: 596 SIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQN 649
+R HF CG I S + R + + +S G+GFV F T + ++A+
Sbjct: 309 DLREHFSVCGKITSAKLMRDQ------KGISKGFGFVCFSTPDEASKAVNTFHG 356
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 127/312 (40%), Gaps = 64/312 (20%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLP-LASVRTTFL------GMAYIGFKDEKNCNKALNKNK 279
+ VKNL + L+A F+ + S + G ++ F+ E+ N A+ K
Sbjct: 102 VFVKNLSDSIDNVRLQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKLN 161
Query: 280 SFW-KGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
F GKQ+ Y+G + + N AK+
Sbjct: 162 GFIIDGKQI------------YAGKFVRKTDRVLPNPDAKYTN----------------- 192
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++++NL VTE+ L + F ++G +A +++ D E ++GF V F PE A +A + L
Sbjct: 193 LYIKNLDPDVTEEALREKFFEFGKIASLVISKD-ENGMSRGFGFVNFESPEDAKRALEAL 251
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-------IL 451
+G ++L++ + K +ER+ Q E R+++I +
Sbjct: 252 NGLQLGSKVLYVARAQKK--------------AEREQLLRRQFEEKRNEQILKYRGSNVY 297
Query: 452 VKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYT 506
VKN+ DL+ F G + +++ GI+ G V F ++A A N+
Sbjct: 298 VKNIDDNVNDDDLREHFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHGY 357
Query: 507 KFKEVPLYLEWA 518
F PLY+ A
Sbjct: 358 MFHRKPLYVAIA 369
>gi|145349140|ref|XP_001418998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579228|gb|ABO97291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 572
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 166/424 (39%), Gaps = 94/424 (22%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A + ++V +L +VTE L + F GP+ + + D T ++ G+A V F P A
Sbjct: 34 AGTSSLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSPNDAAH 93
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A L+ +I GKP + S+R + V I +K
Sbjct: 94 AIDVLN--------FQVINGKP----------IRVLYSQR-----DPAVRRSGVGNIFIK 130
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG--------LVEFLQKNQAKAAFNSLAY 505
NL D KAL + F G + + G V+F + A+AA +++
Sbjct: 131 NL---DKAIDNKALLDTFAQFGTITSAKVAMDGQGNSKGYGFVQFETQEAAQAAIDNVNG 187
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEV 565
+ + +Y+ G F E+S E + N
Sbjct: 188 MELNDKQVYV-----GPFQRRAERSNTGEAKFN--------------------------- 215
Query: 566 EENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFL 625
+Y+KNL+ N +++ +R F + G + S + R ++ KS G
Sbjct: 216 ----------------NVYVKNLSENLSDEKLREKFAEHGAVTSCVIMRDEEGKSKG--- 256
Query: 626 SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVA 681
+GFV + E A++ L + DE + R+ + E EA + + +
Sbjct: 257 ---FGFVCYEEPEGAAAAVEKLDGYTEDEKTWVVCRAQKKAEREAELKAKFDQERRERME 313
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
K G+ + ++N+ ++ ELFK FG + R+ + SG+ RG FV F + +EA
Sbjct: 314 KMAGANLYIKNLEDGTDDEKLRELFKEFGTITSCRVMRD--ASGVSRGSAFVAFSSPDEA 371
Query: 742 KRAM 745
RA+
Sbjct: 372 TRAV 375
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 15/186 (8%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NLS ++++ L + F ++G + ++ D+E K+KGF V + PE A A + L
Sbjct: 217 VYVKNLSENLSDEKLREKFAEHGAVTSCVIMRDEE-GKSKGFGFVCYEEPEGAAAAVEKL 275
Query: 399 DGTVFLGRMLHLIPGKPK-ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
DG + + + K E E + K ER+ + +E + + +KNL
Sbjct: 276 DGYTEDEKTWVVCRAQKKAEREAELKAKFD---QERR-----ERMEKMAGANLYIKNLED 327
Query: 458 RTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTKFKEVP 512
T L+ LF+ FG + RV+ G+ + V F ++A A + P
Sbjct: 328 GTDDEKLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPDEATRAVTEMNGKMVGAKP 387
Query: 513 LYLEWA 518
LY+ A
Sbjct: 388 LYVALA 393
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 158/457 (34%), Gaps = 110/457 (24%)
Query: 201 SKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT--- 256
S TA +D + P + ++ V +L V + L F + P+ S+R
Sbjct: 16 SNATANADGTTPAAQQPGAGT---SSLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDL 72
Query: 257 ----FLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNAS 311
LG AY+ F+ + A++ N GK + + +D + + SG
Sbjct: 73 ITRRSLGYAYVNFQSPNDAAHAIDVLNFQVINGKPIRVLYSQRDPAVRRSGV-------- 124
Query: 312 MENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPID 371
G IF++NL + L F ++G + + +D
Sbjct: 125 -------------------------GNIFIKNLDKAIDNKALLDTFAQFGTITSAKVAMD 159
Query: 372 KETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCIS 431
+ + +KG+ V F E A A +++G + +++ P + + N
Sbjct: 160 GQGN-SKGYGFVQFETQEAAQAAIDNVNGMELNDKQVYVGPFQRRAERSNT--------G 210
Query: 432 ERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFL 491
E K FN V VKNL L+ F G +T V
Sbjct: 211 EAK---FNNV---------YVKNLSENLSDEKLREKFAEHG----------AVTSCVIMR 248
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
+ F + Y + PEG A A EK G E++K
Sbjct: 249 DEEGKSKGFGFVCYEE-----------PEGA-AAAVEKLDGY------------TEDEKT 284
Query: 552 NTAEEDNQQGVPEVEENVEEDEER----EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPI 607
++ E E + D+ER E LYIKNL + ++ +R FK+ G I
Sbjct: 285 WVVCRAQKKAEREAELKAKFDQERRERMEKMAGANLYIKNLEDGTDDEKLRELFKEFGTI 344
Query: 608 ASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
S V R +S G FV F + + +A+
Sbjct: 345 TSCRVMRDASG------VSRGSAFVAFSSPDEATRAV 375
>gi|90103406|gb|ABD85547.1| KIAA0682-like [Ictalurus punctatus]
Length = 150
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 23/136 (16%)
Query: 32 EQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVE 91
E+ + F GT+TD LK+T +GKFR+F F+G+ E+ A AL +FN ++V ++R+ VE
Sbjct: 16 ERFRQMFAAFGTLTDCGLKFTKDGKFRKFGFVGFKCEEDASKALKHFNKSFVDTARVTVE 75
Query: 92 KCSNLGDTTKPKSWSKYA--PDSSAYQKLHNIAPKQDLKPEHTK-DSKPGKKS------- 141
C++ GD K + WSK++ PD + K + KPE K D GKK
Sbjct: 76 FCTDFGDPNKARPWSKHSRQPDRT----------KDEQKPEGEKRDENKGKKEKKPLDVL 125
Query: 142 ---KNDPTFSDFLQLH 154
KND +FL +H
Sbjct: 126 GDLKNDEGLREFLAVH 141
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S+++V+N+P K ++F AFG L L K G R FGFV F + +A +A+
Sbjct: 2 SRLIVKNLPNGMKVERFRQMFAAFGTLTDCGL--KFTKDGKFRKFGFVGFKCEEDASKAL 59
Query: 746 KALCQS 751
K +S
Sbjct: 60 KHFNKS 65
>gi|315056867|ref|XP_003177808.1| hypothetical protein MGYG_01871 [Arthroderma gypseum CBS 118893]
gi|311339654|gb|EFQ98856.1| hypothetical protein MGYG_01871 [Arthroderma gypseum CBS 118893]
Length = 748
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 150/359 (41%), Gaps = 68/359 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T T + LT+ F + PL + +D +T + KG+ VTF E A A + L
Sbjct: 32 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQPKGYGFVTFTDHEDAQSAAKEL 91
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-------IL 451
+ +VF G+ + + +P+ E +D K + A ++ E + KR ++
Sbjct: 92 NNSVFEGKKIKIELAEPRHRE--IDEKEGKSVPS---SAPSKAKELKEKRRLESLPPKLI 146
Query: 452 VKNLPYR-TLPTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYT 506
++NLP+ T P L+ LF +G + +VP G G V + A+ A +
Sbjct: 147 IRNLPWSMTEPEHLELLFRSYGKIKHAVVPKKGSRVAGFGFVVLRGRKNAERAIEGVNGK 206
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
+ L ++WA E + K+ +E ++N+E G+ E + E+ DN +
Sbjct: 207 EVDGRTLAVDWAVEKDEWDNMNKA-AEESDRNQEGGDSEEVAENEHLDVVDNGES----- 260
Query: 567 ENVEEDEE----------------------------------------REPEPDTTLYIK 586
+ + EDEE + +T++I+
Sbjct: 261 DAISEDEEDGGVELDNEDEDEEEDISMGDADDDDLEAEEEEEEEEEEKEDDRNASTIFIR 320
Query: 587 NLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK 645
N+ F++T++S+ HF K GP+ V P G FV FY E + ++
Sbjct: 321 NIPFSATDESLHEHFSKFGPVRYARVV-----LDPATERPRGTAFVCFYKVEDASSCIR 374
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 23/208 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L +T +S+ +F + P+ TV K P GYGFV F E
Sbjct: 31 TLFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQP-----KGYGFVTFTDHEDAQ 85
Query: 642 QALKVLQNSSLDEHQIELK----RSNRNLESEATTVKRKSSNVAKQTGS---------KI 688
A K L NS + +I+++ R E E +V + + AK+ K+
Sbjct: 86 SAAKELNNSVFEGKKIKIELAEPRHREIDEKEGKSVPSSAPSKAKELKEKRRLESLPPKL 145
Query: 689 LVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
++RN+P+ + E +E LF+++G++K +PKK GS + GFGFV + A+RA++
Sbjct: 146 IIRNLPWSMTEPEHLELLFRSYGKIKHAVVPKK--GSRVA-GFGFVVLRGRKNAERAIEG 202
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRK 775
+ + GR L ++WA E D +++ K
Sbjct: 203 V-NGKEVDGRTLAVDWAVEKDEWDNMNK 229
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 216 KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFLGMAYIGFKD 267
+A +R+ T+ V++LP + L YF PL A+V G ++ F D
Sbjct: 21 QAAAKERKTRTLFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQPKGYGFVTFTD 80
Query: 268 EKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDS 326
++ A + N S ++GK++ I + I K KS S
Sbjct: 81 HEDAQSAAKELNNSVFEGKKIKI----------------ELAEPRHREIDEKEGKSVPSS 124
Query: 327 V-QFAEDIAESGR-------IFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKT 377
A+++ E R + +RNL +++TE + L LF YG + ++P K+ +
Sbjct: 125 APSKAKELKEKRRLESLPPKLIIRNLPWSMTEPEHLELLFRSYGKIKHAVVP--KKGSRV 182
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
GF V ++A +A + ++G GR L +
Sbjct: 183 AGFGFVVLRGRKNAERAIEGVNGKEVDGRTLAV 215
>gi|407393203|gb|EKF26533.1| hypothetical protein MOQ_009766 [Trypanosoma cruzi marinkellei]
Length = 878
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 61/83 (73%), Gaps = 6/83 (7%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 741
K++V+N+PF+A + ++ +LF AF E++ VRLP+K HRGF FVEF+++ EA
Sbjct: 792 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHQFSSHRENNHRGFAFVEFLSEEEA 851
Query: 742 KRAMKALCQSTHLYGRRLVLEWA 764
KRA++ L ++THLYGR LVL++A
Sbjct: 852 KRALETL-KATHLYGRHLVLQYA 873
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 162/398 (40%), Gaps = 65/398 (16%)
Query: 44 VTDVQLKYT-TEGKFR---RFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDT 99
+TD +K + + GK + R AF+G+ + +F+ TY S++++VE L D
Sbjct: 35 ITDCVIKRSQSTGKTKGVVRMAFVGFRNAASGNFVVRHFDGTYFGSAKLRVEVAKGLADV 94
Query: 100 TKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQLHGKDVS 159
+ K + + A K+D E T S G + D Q K V+
Sbjct: 95 GVTTNMRKKMEGAEVRPQRSATAGKKD--GEETAGSSGGAMKRP----RDGGQ---KTVA 145
Query: 160 KLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPSDPSVPPVSKAPV 219
+ + + G E E++ + N+ I++ +LK S T S+ +P +++
Sbjct: 146 EQV---ERGGMETEDDAQLRKKNERKKEFIAE----RLKATSGPTWTSEVLLPEFAESNA 198
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNK 279
+ T + G K+ Y A DE+N +AL + +
Sbjct: 199 KPMEGGTAM-----GGAHGKEYDDYTNEENDA-------------LDDEENERRALERQQ 240
Query: 280 SFWKGKQLNIYKY---------SKDNSAKYSGAAD--------DNNNASME-----NIKA 317
+ K L+ K +S K +GA D D ++A +E ++
Sbjct: 241 ALGKVSDLDFLASIATKTEATSRKSSSVKGNGAVDEEVGNIGEDEDDAGVEQQEDVGSES 300
Query: 318 KHWKSQEDSVQFAED----IAESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDK 372
+ S D +D + ES RI + N+ Y TEDD+ + G + V +P+ K
Sbjct: 301 RQQLSCVDDSSKKDDQEAIVQESRRIRLGNIPYIATEDDVKQFASSLVGSVEAVHIPLTK 360
Query: 373 ETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+T ++KG A V F+ E A +A G VF+GR+L +
Sbjct: 361 DTRQSKGAAFVKFVRVEDAVRALSLCRGAVFMGRLLRV 398
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTD---LKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
A +++ RS ILVKN+ T P D L +F +G L P G L + +
Sbjct: 508 ARQNLLKTRSNTTILVKNIQT-TDPDDAAQLSKMFLRYGALEATAFPSAGGFALFRYTHQ 566
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVF 523
A+ AF L+Y FK PL+LEWAP G
Sbjct: 567 QDARVAFQRLSYKLFKNAPLFLEWAPIGAI 596
>gi|71423762|ref|XP_812563.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70877357|gb|EAN90712.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 879
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 61/83 (73%), Gaps = 6/83 (7%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 741
K++V+N+PF+A + ++ +LF AF E++ VRLP+K HRGF FVEF+++ EA
Sbjct: 793 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHQFSSHRENNHRGFAFVEFLSEEEA 852
Query: 742 KRAMKALCQSTHLYGRRLVLEWA 764
KRA++ L ++THLYGR LVL++A
Sbjct: 853 KRALETL-KATHLYGRHLVLQYA 874
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTD---LKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
A +++ RS ILVKN+ T P D L +F +G L P G L + +
Sbjct: 509 ARQNLLKTRSNTTILVKNIQT-TDPDDAAQLSKMFLRYGTLEATAFPSAGGFALFRYTHQ 567
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
A+ AF L+Y FK PL+LEWAP G ++ + +K + K+N+
Sbjct: 568 QDARVAFQRLSYKLFKNAPLFLEWAPIGAIVTNDDEDGRDDDDKT-------KTPVKDNS 620
Query: 554 AEEDNQQGVPEVEENVEEDEEREPE------PDTTLYIKNLNFNSTED 595
+ D + ++VE+ + P P TL+I N+ F S E+
Sbjct: 621 SATDGAK-----PQDVEKADLDAPSGNAAFAPVFTLFITNIPFTSNEE 663
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
+ ES RI + N+ Y TEDD+ + G + V +P+ K+T ++KG A V F+ E A
Sbjct: 321 VQESRRIRLGNIPYIATEDDVKQFASSLVGSVEAVHIPLTKDTRQSKGAAFVKFVRVEDA 380
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A G VF+GR+L +
Sbjct: 381 VRALSLCRGAVFMGRLLRV 399
>gi|71652574|ref|XP_814940.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879958|gb|EAN93089.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 878
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 61/83 (73%), Gaps = 6/83 (7%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 741
K++V+N+PF+A + ++ +LF AF E++ VRLP+K HRGF FVEF+++ EA
Sbjct: 792 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHHFSSHRENNHRGFAFVEFLSEEEA 851
Query: 742 KRAMKALCQSTHLYGRRLVLEWA 764
KRA++ L ++THLYGR LVL++A
Sbjct: 852 KRALETL-KATHLYGRHLVLQYA 873
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTD---LKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
A +++ RS ILVKN+ T P D L +F +G L P G L + +
Sbjct: 508 ARQNLLKTRSNTTILVKNIQT-TDPDDAAQLSKMFLRYGALEATAFPSAGGFALFRYTHQ 566
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVF 523
A+ AF L+Y FK PL+LEWAP G
Sbjct: 567 QDARVAFQRLSYKLFKNAPLFLEWAPIGAI 596
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
+ ES RI + N+ Y TEDD+ + G + V +P+ K+T ++KG A V F+ E A
Sbjct: 320 VQESRRIRLGNIPYIATEDDVKQFASSLVGSVEAVHIPLTKDTRQSKGAAFVKFVRVEDA 379
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A G VF+GR+L +
Sbjct: 380 MRALSLCRGAVFMGRLLRV 398
>gi|303316410|ref|XP_003068207.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107888|gb|EER26062.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037953|gb|EFW19889.1| ribosome biogenesis protein Nop4 [Coccidioides posadasii str.
Silveira]
Length = 751
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 154/377 (40%), Gaps = 65/377 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT+ F + P+ D +T + KG+ VTF E A +A L
Sbjct: 48 LFVRSLPPSATTESLTEYFSQSYPIKHATAVADPQTKQCKGYGFVTFADVEDAQRALGEL 107
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI----ILVKN 454
+G+VF GR L + +P+ E +D K+ + + + E R K ++V+N
Sbjct: 108 NGSVFDGRKLKIEVAEPRHRE--IDEKIGKSVPSAEATKLKEEREQRRKEARPPKLIVRN 165
Query: 455 LPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFK 509
LP+ P L LF +G + ++P G G V K A+ A + +
Sbjct: 166 LPWSVGEPEQLAVLFRSYGKVKHAVIPKKGSRHAGFGFVVMRGKKNAEKALEGVNGKEVD 225
Query: 510 EVPLYLEWAPE----GVFAEAKEKSKGK--EKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
L ++WA + + + + GK + + E G +G + ++A+ D+
Sbjct: 226 GRTLAVDWAVDKEVWDTLQQPTDNTAGKLEDGQAAVENGVDGHSRVENDSAKSDDA---- 281
Query: 564 EVEENVEEDEERE------------------------------PEPDTTLYIKNLNFNST 593
+E + D E E +T++I+NL F++T
Sbjct: 282 -IELGTDVDAEMEDVDFHGSGDEEDEEDEEQEDDDDEEGDGDDDRNASTVFIRNLPFSAT 340
Query: 594 EDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY--------TRESLNQALK 645
++++ HF + G + + + P G GFV F+ RES + +
Sbjct: 341 DETLYEHFTRFGAVRYARIVVDPETDRP-----RGTGFVCFWKEDEAKACIRESPKRTEE 395
Query: 646 VLQNSSLDEHQIELKRS 662
VL S + +K+S
Sbjct: 396 VLSKDSKQKSAFAIKKS 412
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 23/197 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L ++T +S+ +F + PI T DP++ GYGFV F E
Sbjct: 47 TLFVRSLPPSATTESLTEYFSQSYPIKHATAV--ADPQTK---QCKGYGFVTFADVEDAQ 101
Query: 642 QALKVLQNSSLDEHQIELKRS---NRNLE---------SEATTVKRKSSNVAKQTGS-KI 688
+AL L S D +++++ + +R ++ +EAT +K + K+ K+
Sbjct: 102 RALGELNGSVFDGRKLKIEVAEPRHREIDEKIGKSVPSAEATKLKEEREQRRKEARPPKL 161
Query: 689 LVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
+VRN+P+ + E + LF+++G++K +PKK GS H GFGFV K A++A++
Sbjct: 162 IVRNLPWSVGEPEQLAVLFRSYGKVKHAVIPKK--GS-RHAGFGFVVMRGKKNAEKALEG 218
Query: 748 LCQSTHLYGRRLVLEWA 764
+ + GR L ++WA
Sbjct: 219 V-NGKEVDGRTLAVDWA 234
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFLGMAYIGFKDEKN 270
H+R T+ V++LP + L YF P+ A+ G ++ F D ++
Sbjct: 43 AHRR---TLFVRSLPPSATTESLTEYFSQSYPIKHATAVADPQTKQCKGYGFVTFADVED 99
Query: 271 CNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
+AL + N S + G++L I + + D+ S+ + +A K + + +
Sbjct: 100 AQRALGELNGSVFDGRKLKI-----EVAEPRHREIDEKIGKSVPSAEATKLKEEREQRRK 154
Query: 330 AEDIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP 388
A ++ VRNL ++V E + L LF YG + ++P K+ + GF V
Sbjct: 155 E---ARPPKLIVRNLPWSVGEPEQLAVLFRSYGKVKHAVIP--KKGSRHAGFGFVVMRGK 209
Query: 389 EHATQAYQHLDGTVFLGRMLHL 410
++A +A + ++G GR L +
Sbjct: 210 KNAEKALEGVNGKEVDGRTLAV 231
>gi|384487651|gb|EIE79831.1| hypothetical protein RO3G_04536 [Rhizopus delemar RA 99-880]
Length = 687
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 101/200 (50%), Gaps = 31/200 (15%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL+++ L FN+T + + F + GP+ V ++ +G+V + E
Sbjct: 26 TLFVRGLPFNATNEDLEEFFGEIGPVRKCFVVTER------------FGYVHYAMEEDAQ 73
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN-----------------VAKQT 684
AL L+N +I+++ + R E+ K+ A +
Sbjct: 74 TALTKLKNVKFKGRKIKIELAKRKSETAHDDNKKTKQPEPVSEKKESEPKEKVEPAAFEV 133
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
++++VRN+P++ +++++ +LF A G++ V+LP+K G L RGF F++F +EAK A
Sbjct: 134 NARLIVRNLPWKYREADLSKLFNAHGKVHDVKLPRKWEGGPL-RGFAFIQFDKVDEAKAA 192
Query: 745 MKALCQSTHLYGRRLVLEWA 764
M+AL + H +GR + ++W+
Sbjct: 193 MEALNATEH-HGRTIAVDWS 211
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---GMAYIGFKDEKNCNKALNKNKSF- 281
T+ V+ LP +DL+ +F + VR F+ Y+ + E++ AL K K+
Sbjct: 26 TLFVRGLPFNATNEDLEEFFGEI--GPVRKCFVVTERFGYVHYAMEEDAQTALTKLKNVK 83
Query: 282 WKGKQLNIYKYSKDNSAKYSGAADDNNNASM-ENIKAKHWKSQEDSVQFAEDIAESGRIF 340
+KG+++ I + K A DDN E + K ++ V+ A + R+
Sbjct: 84 FKGRKIKIELAKR----KSETAHDDNKKTKQPEPVSEKKESEPKEKVEPAA-FEVNARLI 138
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
VRNL + E DL+KLF +G + +V LP E +GFA + F + A A + L+
Sbjct: 139 VRNLPWKYREADLSKLFNAHGKVHDVKLPRKWEGGPLRGFAFIQFDKVDEAKAAMEALNA 198
Query: 401 TVFLGRMLHLIPGKPK 416
T GR + + PK
Sbjct: 199 TEHHGRTIAVDWSIPK 214
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
P TL+++NL F STE+ +++ FK+ GP+ + R P LS G GFV
Sbjct: 313 PSEGRTLFVRNLLFESTEEDLKQLFKQWGPVVYAKITR-----DPVTRLSRGTGFVCMKK 367
Query: 637 RESLNQAL 644
+E + L
Sbjct: 368 KEDAAKCL 375
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
+E +FVRNL + TE+DL +LF+++GP+ + D T ++G V E A +
Sbjct: 314 SEGRTLFVRNLLFESTEEDLKQLFKQWGPVVYAKITRDPVTRLSRGTGFVCMKKKEDAAK 373
Query: 394 AYQHLDG 400
+ +
Sbjct: 374 CLEEAEA 380
>gi|119188303|ref|XP_001244758.1| hypothetical protein CIMG_04199 [Coccidioides immitis RS]
gi|392871470|gb|EAS33387.2| ribosome biogenesis protein [Coccidioides immitis RS]
Length = 751
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 154/377 (40%), Gaps = 65/377 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT+ F + P+ D +T + KG+ VTF E A +A L
Sbjct: 48 LFVRSLPPSATTESLTEYFSQSYPIKHATAVADPQTKQCKGYGFVTFADVEDAQRALGEL 107
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI----ILVKN 454
+G+VF GR L + +P+ E +D K+ + + + E R K ++V+N
Sbjct: 108 NGSVFDGRKLKIEVAEPRHRE--IDEKIGKSVPSAEATKLKEEREQRRKEAQPPKLIVRN 165
Query: 455 LPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFK 509
LP+ P L LF +G + ++P G G V K A+ A + +
Sbjct: 166 LPWSVGEPEQLAVLFRSYGKVKHAVIPKKGSRHAGFGFVVMRGKKNAEKALEGVNGKEVD 225
Query: 510 EVPLYLEWAPE----GVFAEAKEKSKGK--EKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
L ++WA + + + + GK + + E G +G + ++A+ D+
Sbjct: 226 GRTLAVDWAVDKEVWDTLQQPTDNTAGKLEDGQTAVENGVDGHSGVENDSAKSDDA---- 281
Query: 564 EVEENVEEDEERE------------------------------PEPDTTLYIKNLNFNST 593
+E + D E E +T++I+NL F++T
Sbjct: 282 -IEPGTDVDAEMEDVDFHGSGDEEGEEDEEQEDDDDEEEDGDDDRNASTVFIRNLPFSAT 340
Query: 594 EDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY--------TRESLNQALK 645
++++ HF + G + + + P G GFV F+ RES + +
Sbjct: 341 DETLYEHFTRFGAVRYARIVVDPETDRP-----RGTGFVCFWKEDEAKACIRESPKRTEE 395
Query: 646 VLQNSSLDEHQIELKRS 662
VL S + +K+S
Sbjct: 396 VLSKDSKQKSAFAIKKS 412
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 23/197 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L ++T +S+ +F + PI T DP++ GYGFV F E
Sbjct: 47 TLFVRSLPPSATTESLTEYFSQSYPIKHATAV--ADPQTK---QCKGYGFVTFADVEDAQ 101
Query: 642 QALKVLQNSSLDEHQIELKRS---NRNLE---------SEATTVKRKSSNVAKQTGS-KI 688
+AL L S D +++++ + +R ++ +EAT +K + K+ K+
Sbjct: 102 RALGELNGSVFDGRKLKIEVAEPRHREIDEKIGKSVPSAEATKLKEEREQRRKEAQPPKL 161
Query: 689 LVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
+VRN+P+ + E + LF+++G++K +PKK GS H GFGFV K A++A++
Sbjct: 162 IVRNLPWSVGEPEQLAVLFRSYGKVKHAVIPKK--GS-RHAGFGFVVMRGKKNAEKALEG 218
Query: 748 LCQSTHLYGRRLVLEWA 764
+ + GR L ++WA
Sbjct: 219 V-NGKEVDGRTLAVDWA 234
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFLGMAYIGFKDEKN 270
H+R T+ V++LP + L YF P+ A+ G ++ F D ++
Sbjct: 43 AHRR---TLFVRSLPPSATTESLTEYFSQSYPIKHATAVADPQTKQCKGYGFVTFADVED 99
Query: 271 CNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
+AL + N S + G++L I + + D+ S+ + +A K + + +
Sbjct: 100 AQRALGELNGSVFDGRKLKI-----EVAEPRHREIDEKIGKSVPSAEATKLKEEREQRRK 154
Query: 330 AEDIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP 388
A+ ++ VRNL ++V E + L LF YG + ++P K+ + GF V
Sbjct: 155 E---AQPPKLIVRNLPWSVGEPEQLAVLFRSYGKVKHAVIP--KKGSRHAGFGFVVMRGK 209
Query: 389 EHATQAYQHLDGTVFLGRMLHL 410
++A +A + ++G GR L +
Sbjct: 210 KNAEKALEGVNGKEVDGRTLAV 231
>gi|407835043|gb|EKF99127.1| hypothetical protein TCSYLVIO_009959 [Trypanosoma cruzi]
Length = 871
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 61/83 (73%), Gaps = 6/83 (7%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 741
K++V+N+PF+A + ++ +LF AF E++ VRLP+K HRGF FVEF+++ EA
Sbjct: 785 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHQFSSHRENNHRGFAFVEFLSEEEA 844
Query: 742 KRAMKALCQSTHLYGRRLVLEWA 764
KRA++ L ++THLYGR LVL++A
Sbjct: 845 KRALETL-KATHLYGRHLVLQYA 866
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTD---LKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
A +++ RS ILVKN+ T P D L +F +G L P G L + +
Sbjct: 501 ARQNLLKTRSNTTILVKNIQT-TDPDDAAQLSKMFLRYGALEATAFPSAGGFALFRYTHQ 559
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPEGVF 523
A+ AF L+Y FK PL+LEWAP G
Sbjct: 560 QDARVAFQRLSYKLFKNAPLFLEWAPIGAI 589
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
+ ES RI + N+ Y TEDD+ + G + V +P+ K+T ++KG A V F+ E A
Sbjct: 313 VQESRRIRLGNIPYIATEDDVKQFASSLVGSVEAVHIPLTKDTRQSKGAAFVKFVRVEDA 372
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A G VF+GR+L +
Sbjct: 373 VRALSLCRGAVFMGRLLRV 391
>gi|735966|emb|CAA56649.1| surface antigen [Entamoeba histolytica]
Length = 294
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 295 DNSAKYSGAADDNNNASMEN----IKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTE 350
D K + + DD NN ME I + + D + + E GRI++ NL + TE
Sbjct: 142 DGKKKKTDSEDDQNNQQMEEDEEMINEQEHQKSMDEIDVKD--WEEGRIYITNLPFNCTE 199
Query: 351 DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
D+ K F+++G +AE+ LPIDK T K+KGF V F++P+ A +A +D GR++H+
Sbjct: 200 DEFRKEFDRFGNIAEIHLPIDKITKKSKGFGKVLFVVPQDAVKACNEMDNKFIKGRIVHV 259
Query: 411 IPGK 414
K
Sbjct: 260 TYAK 263
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 19/169 (11%)
Query: 34 LKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKC 93
LK +FE+ G +TD ++ T +G R+F FIG+ EDQAQ A+ N Y+ SS+++V
Sbjct: 18 LKQQFEKFGGITDCKVMRTPQGVSRKFGFIGFENEDQAQTAITKMNGAYIQSSKLQVSLA 77
Query: 94 SNLGDTTKPKSWSKYAPDSSAYQ--KLHNIAPKQDLKPEHTKDSKPG-KKSKNDPTFSDF 150
+GD T + WSKY+ SS++ K I P TK P KK K + +
Sbjct: 78 KAIGDQTIERPWSKYSVGSSSFSNDKKRKIIP--------TKHETPTIKKKKVSSSLDEL 129
Query: 151 LQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHAD---ISDMEYLK 196
++ + KL DG++K+ ++ED+ NNQ D I++ E+ K
Sbjct: 130 KKIANERRPKL-----DDGKKKKTDSEDDQNNQQMEEDEEMINEQEHQK 173
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 56/251 (22%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSL- 503
I++KNLP R LK FE FG + +V+ P G++ G + F ++QA+ A +
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGVSRKFGFIGFENEDQAQTAITKMN 63
Query: 504 -AYTKFKEVPLYLE-----------WAPEGVFAEAKEKSKGK------------------ 533
AY + ++ + L W+ V + + K +
Sbjct: 64 GAYIQSSKLQVSLAKAIGDQTIERPWSKYSVGSSSFSNDKKRKIIPTKHETPTIKKKKVS 123
Query: 534 ------EKEKNEEEGEEGEEEKKENTAEED-NQQGVPEVEENVEEDEEREP--EPDTT-- 582
+K NE + + +KK+ +E+D N Q + E EE + E E ++ E D
Sbjct: 124 SSLDELKKIANERRPKLDDGKKKKTDSEDDQNNQQMEEDEEMINEQEHQKSMDEIDVKDW 183
Query: 583 ----LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
+YI NL FN TED R+ F + G IA + + K K S G+G V F +
Sbjct: 184 EEGRIYITNLPFNCTEDEFRKEFDRFGNIAEIHLPIDKITKK-----SKGFGKVLFVVPQ 238
Query: 639 SLNQALKVLQN 649
+A + N
Sbjct: 239 DAVKACNEMDN 249
>gi|385301643|gb|EIF45820.1| multiple rna-binding domain-containing protein 1 [Dekkera
bruxellensis AWRI1499]
Length = 136
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
Q +KI+V+N+PF+A + +V +LF +F LK VR+PKK S RGF FVEF T EA+
Sbjct: 11 QKSTKIIVKNLPFEASRDDVFQLFSSFAHLKSVRVPKKFDRSA--RGFAFVEFNTVKEAE 68
Query: 743 RAMKALCQSTHLYGRRLVLEWAEE-ADNVED 772
M L Q HL GRRLVL++AE+ ADN E+
Sbjct: 69 TVMDQL-QGVHLLGRRLVLDFAEKNADNAEE 98
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 325 DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALV 383
D V+ +D+ +S +I V+NL + + DD+ +LF + L V +P K+ D++ +GFA V
Sbjct: 2 DQVRKEKDLQKSTKIIVKNLPFEASRDDVFQLFSSFAHLKSVRVP--KKFDRSARGFAFV 59
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHL 410
F + A L G LGR L L
Sbjct: 60 EFNTVKEAETVMDQLQGVHLLGRRLVL 86
>gi|389600475|ref|XP_001562851.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504386|emb|CAM37284.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 943
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 741
K++V+N+PF+A + +V ELF AF E++ VR+P+K HRGF FVEF+++ EA
Sbjct: 858 KLIVKNLPFEATERDVRELFSAFSEIRSVRVPRKSHTFSSHRENNHRGFAFVEFLSEVEA 917
Query: 742 KRAMKALCQSTHLYGRRLVLEWA 764
RA++ L +STHLYGR LVL++A
Sbjct: 918 ARALETL-KSTHLYGRHLVLQYA 939
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 423 DGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTL--PTDLKALFEPFGDLGRVLVP 480
D + C + E A ++++RS ILVKNL + +L LF FG L P
Sbjct: 562 DEGIACDVLE---GATQNLLKSRSNTTILVKNLQLKDGGDAAELTKLFVRFGVLETSAFP 618
Query: 481 PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKS 530
G L F A+ AF L+Y FK PL+LEWAP G + E S
Sbjct: 619 SAGTFALFRFTHPQDARIAFMRLSYKLFKAAPLFLEWAPVGALMDDGEGS 668
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 331 EDIAE-SGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDKTKGFALVTFLMP 388
E+IA S RI + N+ Y TE+ L + GP+ V +P+ K+T + KG A V F
Sbjct: 360 EEIARASHRIRLGNIPYIATEEHLKQFATSLVGPVEAVHIPLTKDTRQNKGAAFVRFFSA 419
Query: 389 EHATQAYQHLDGTVFLGRMLHL 410
E A +A + G + +GR+L +
Sbjct: 420 EDAVRALRLCRGAILMGRLLRV 441
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Query: 270 NCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAA-----DDNNNASMENIKAKHWKSQE 324
+C + + + + ++ ++ + ++SGA DD +A+ + A+ +
Sbjct: 783 SCVVSKQTTQLLQQARVIDTTSTAQGTTGQFSGANARDDNDDEADATKTAVLARR-RGVT 841
Query: 325 DSVQFAEDI---AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET------D 375
S + ++ ++ ++ V+NL + TE D+ +LF + + V +P T +
Sbjct: 842 SSAATSSEVPPGSDPQKLIVKNLPFEATERDVRELFSAFSEIRSVRVPRKSHTFSSHREN 901
Query: 376 KTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+GFA V FL A +A + L T GR L L
Sbjct: 902 NHRGFAFVEFLSEVEAARALETLKSTHLYGRHLVL 936
>gi|452936|gb|AAB28794.1| 60 kda non-pathogenic specific antigen [Entamoeba histolytica, SAW
1734R, Peptide Partial, 273 aa]
Length = 273
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 295 DNSAKYSGAADDNNNASMEN----IKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTE 350
D K + + DD NN ME I + + D + + E GRI++ NL + TE
Sbjct: 137 DGKKKKTDSEDDQNNQQMEEDEEMINEQEHQKSMDEIDVKD--WEEGRIYITNLPFNCTE 194
Query: 351 DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
D+ K F+++G +AE+ LPIDK T K+KGF V F++P+ A +A +D GR++H+
Sbjct: 195 DEFRKEFDRFGNIAEIHLPIDKITKKSKGFGKVLFVVPQDAVKACNEMDNKFIKGRIVHV 254
Query: 411 IPGK 414
K
Sbjct: 255 TYAK 258
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 19/169 (11%)
Query: 34 LKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKC 93
LK +FE+ G +TD ++ T +G R+F FIG+ EDQAQ A+ N Y+ SS+++V
Sbjct: 13 LKQQFEKFGGITDCKVMRTPQGVSRKFGFIGFENEDQAQTAITKMNGAYIQSSKLQVSLA 72
Query: 94 SNLGDTTKPKSWSKYAPDSSAYQ--KLHNIAPKQDLKPEHTKDSKPG-KKSKNDPTFSDF 150
+GD T + WSKY+ SS++ K I P TK P KK K + +
Sbjct: 73 KAIGDQTIERPWSKYSVGSSSFSNDKKRKIIP--------TKHETPTIKKKKVSSSLDEL 124
Query: 151 LQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHAD---ISDMEYLK 196
++ + KL DG++K+ ++ED+ NNQ D I++ E+ K
Sbjct: 125 KKIANERRPKL-----DDGKKKKTDSEDDQNNQQMEEDEEMINEQEHQK 168
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 56/249 (22%)
Query: 452 VKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSL--A 504
+KNLP R LK FE FG + +V+ P G++ G + F ++QA+ A + A
Sbjct: 1 IKNLPERADEKILKQQFEKFGGITDCKVMRTPQGVSRKFGFIGFENEDQAQTAITKMNGA 60
Query: 505 YTKFKEVPLYLE-----------WAPEGVFAEAKEKSKGK-------------------- 533
Y + ++ + L W+ V + + K +
Sbjct: 61 YIQSSKLQVSLAKAIGDQTIERPWSKYSVGSSSFSNDKKRKIIPTKHETPTIKKKKVSSS 120
Query: 534 ----EKEKNEEEGEEGEEEKKENTAEED-NQQGVPEVEENVEEDEEREP--EPDTT---- 582
+K NE + + +KK+ +E+D N Q + E EE + E E ++ E D
Sbjct: 121 LDELKKIANERRPKLDDGKKKKTDSEDDQNNQQMEEDEEMINEQEHQKSMDEIDVKDWEE 180
Query: 583 --LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+YI NL FN TED R+ F + G IA + + K K S G+G V F +
Sbjct: 181 GRIYITNLPFNCTEDEFRKEFDRFGNIAEIHLPIDKITKK-----SKGFGKVLFVVPQDA 235
Query: 641 NQALKVLQN 649
+A + N
Sbjct: 236 VKACNEMDN 244
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 15/201 (7%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
E P L++ N+++N E+ + R F++ G +A V + +D S G+G+V+F
Sbjct: 237 ESAPTGNLFVGNISWNVDEEWLTREFEEFGELAGVRIITDRD-----SGRSKGFGYVEFS 291
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTG-------SKI 688
++ +AL+ + LD ++ L S ++ KS++ A + G + +
Sbjct: 292 DPQNAKKALEAKNGAELDGRELRLDFSTPRT-NDGPGAGNKSNDRAARFGDTTNAPAATL 350
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
V NI F A ++ + E F+ G +K VRLP +G +GFG+VE + EA+ A AL
Sbjct: 351 FVGNISFDADENAITEYFQEHGTIKAVRLPTDRE-TGAPKGFGYVEMSSIEEAQAAFTAL 409
Query: 749 CQSTHLYGRRLVLEWAEEADN 769
Q + GR + L++A E N
Sbjct: 410 -QGADIAGRPIRLDYAAERSN 429
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 321 KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGF 380
K++ D+V ++ A +G +FV N+S+ V E+ LT+ FE++G LA V + D+++ ++KGF
Sbjct: 229 KNKTDAV---DESAPTGNLFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGF 285
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQ 440
V F P++A +A + +G GR L L P+ N+G G + R D N
Sbjct: 286 GYVEFSDPQNAKKALEAKNGAELDGRELRLDFSTPRTNDGPGAGNKSNDRAARFGDTTNA 345
Query: 441 VVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQK 493
+ V N+ + + F+ G + V +P P G G VE
Sbjct: 346 PAA-----TLFVGNISFDADENAITEYFQEHGTIKAVRLPTDRETGAPKGF-GYVEMSSI 399
Query: 494 NQAKAAFNSLAYTKFKEVPLYLEWAPE 520
+A+AAF +L P+ L++A E
Sbjct: 400 EEAQAAFTALQGADIAGRPIRLDYAAE 426
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 259 GMAYIGFKDEKNCNKALN-KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G Y+ F D +N KAL KN + G++L + +S + GA +
Sbjct: 284 GFGYVEFSDPQNAKKALEAKNGAELDGRELRL-DFSTPRTNDGPGAGN------------ 330
Query: 318 KHWKSQEDSVQFAEDI-AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
KS + + +F + A + +FV N+S+ E+ +T+ F+++G + V LP D+ET
Sbjct: 331 ---KSNDRAARFGDTTNAPAATLFVGNISFDADENAITEYFQEHGTIKAVRLPTDRETGA 387
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
KGF V E A A+ L G GR + L
Sbjct: 388 PKGFGYVEMSSIEEAQAAFTALQGADIAGRPIRL 421
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 657 IELKRSNRNLESEATTVKRKSSNV--AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKF 714
+E K+ E T K K+ V + TG+ + V NI + + + F+ FGEL
Sbjct: 212 VESKKRKAEAEPAHATKKNKTDAVDESAPTGN-LFVGNISWNVDEEWLTREFEEFGELAG 270
Query: 715 VRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
VR+ SG +GFG+VEF AK+A++A L GR L L+++
Sbjct: 271 VRIITDR-DSGRSKGFGYVEFSDPQNAKKALEA-KNGAELDGRELRLDFS 318
>gi|255549774|ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223544843|gb|EEF46358.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 608
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 174/440 (39%), Gaps = 95/440 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE +L +F GP+ V L T ++ + V F P A +A +L
Sbjct: 21 LYVGDLDPEVTEMNLRTVFSSMGPIRNVHLCRCSLTGRSLCYGYVNFYRPYDAYKALSNL 80
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ T G+++ ++ P K GN + VK
Sbjct: 81 NHTYLKGKLMRIMWCQRNPCARKSGIGN----------------------------LYVK 112
Query: 454 NLPYRTLPTDLKALFEPFGD-LGRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFK 509
NL L++LF FG L +V +G + G V+F ++ A AA +L T K
Sbjct: 113 NLDASIDSAGLQSLFSKFGTILSCKVVEEHGKSKGYGFVQFDSEDSALAARTALHDTMLK 172
Query: 510 EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
E LY+ + +K+E +E K
Sbjct: 173 EKKLYVS----------------RFVKKSERTTATSYDELKF------------------ 198
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
T LY+KNL+ + T+D+ F G I S + + + K S G+
Sbjct: 199 -----------TNLYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQDHNGK------SRGF 241
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK----SSNVAKQTG 685
GFV F + E +A+ L L+ + + R+ E + ++++ K
Sbjct: 242 GFVDFESPEDAKKAVDALNGYQLESRTLFVGRAQAKAERKKILQHEYKDIFNTHMEKFKA 301
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S + V+N+ +++ELF G++ ++ + +G RGFGFV F + EAK+A+
Sbjct: 302 SNLYVKNLALCIDNDKLQELFSCSGKIVSAKVMR--YDNGASRGFGFVCFSSPEEAKKAL 359
Query: 746 KALCQSTHLYGRRLVLEWAE 765
AL + G+ L + A+
Sbjct: 360 NALNGAV-FQGKSLYVAMAQ 378
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
+E+ V +P P +LY+ +L+ TE ++R F GPI +V + R
Sbjct: 3 MEQLVSLKLPGDPRPRLSLYVGDLDPEVTEMNLRTVFSSMGPIRNVHLCRCSLTGR---- 58
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
S+ YG+V FY +AL L ++ L + + RN A+++
Sbjct: 59 -SLCYGYVNFYRPYDAYKALSNLNHTYLKGKLMRIMWCQRN-------------PCARKS 104
Query: 685 G-SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
G + V+N+ + ++ LF FG + ++ ++ G +G+GFV+F +++ A
Sbjct: 105 GIGNLYVKNLDASIDSAGLQSLFSKFGTILSCKVVEE---HGKSKGYGFVQFDSEDSALA 161
Query: 744 AMKALCQST----HLYGRRLVLEWAEEADNVEDIRKRTNRY 780
A AL + LY R V + D K TN Y
Sbjct: 162 ARTALHDTMLKEKKLYVSRFVKKSERTTATSYDELKFTNLY 202
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 144/376 (38%), Gaps = 81/376 (21%)
Query: 216 KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASV---RTTFLG----MAYIGFKD 267
K P R ++ V +L V + +L+ F + P+ +V R + G Y+ F
Sbjct: 10 KLPGDPRPRLSLYVGDLDPEVTEMNLRTVFSSMGPIRNVHLCRCSLTGRSLCYGYVNFYR 69
Query: 268 EKNCNKAL-NKNKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASMEN--------- 314
+ KAL N N ++ KGK + I ++ A+ SG + N +AS+++
Sbjct: 70 PYDAYKALSNLNHTYLKGKLMRIMWCQRNPCARKSGIGNLYVKNLDASIDSAGLQSLFSK 129
Query: 315 --------IKAKHWKSQEDS-VQF-AEDIAESGR-------------------------- 338
+ +H KS+ VQF +ED A + R
Sbjct: 130 FGTILSCKVVEEHGKSKGYGFVQFDSEDSALAARTALHDTMLKEKKLYVSRFVKKSERTT 189
Query: 339 -----------IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
++V+NLS +T+D +F +G + ++ D K++GF V F
Sbjct: 190 ATSYDELKFTNLYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQD-HNGKSRGFGFVDFES 248
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSK 447
PE A +A L+G R L + + K + + D FN +E
Sbjct: 249 PEDAKKAVDALNGYQLESRTLFVGRAQAKAERKKI-------LQHEYKDIFNTHMEKFKA 301
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY--GIT---GLVEFLQKNQAKAAFNS 502
+ VKNL L+ LF G + V Y G + G V F +AK A N+
Sbjct: 302 SNLYVKNLALCIDNDKLQELFSCSGKIVSAKVMRYDNGASRGFGFVCFSSPEEAKKALNA 361
Query: 503 LAYTKFKEVPLYLEWA 518
L F+ LY+ A
Sbjct: 362 LNGAVFQGKSLYVAMA 377
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
++ ++V+NL+ + D L +LF G + + + + ++GF V F PE A +A
Sbjct: 300 KASNLYVKNLALCIDNDKLQELFSCSGKIVSAKV-MRYDNGASRGFGFVCFSSPEEAKKA 358
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENE 419
L+G VF G+ L++ + K +
Sbjct: 359 LNALNGAVFQGKSLYVAMAQCKRDR 383
>gi|398011431|ref|XP_003858911.1| hypothetical protein, conserved [Leishmania donovani]
gi|322497122|emb|CBZ32193.1| hypothetical protein, conserved [Leishmania donovani]
Length = 952
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 61/84 (72%), Gaps = 6/84 (7%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 741
K++V+N+PF+A + +V ELF AF E++ VR+P+K HRGF FVEF+++ EA
Sbjct: 867 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSSHRENNHRGFAFVEFLSEAEA 926
Query: 742 KRAMKALCQSTHLYGRRLVLEWAE 765
RA++ L ++THLYGR LVL++A+
Sbjct: 927 ARALETL-KATHLYGRHLVLQYAK 949
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 65/163 (39%), Gaps = 13/163 (7%)
Query: 437 AFNQVVEARSKRIILVKNLPYR--TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
A +++RS ILVKNL + +L LF FG L P G+ L +
Sbjct: 571 ATQNFLKSRSNTTILVKNLQLKDGNDAAELTKLFVRFGVLEASAFPSAGMFALFRYTHPQ 630
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
A+ AF L+Y FK PL+LEWAP G E E ++ G
Sbjct: 631 DARIAFTRLSYKLFKTAPLFLEWAPVGALMEDSEGGSAPAVAASDLGLTAGP-------- 682
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSI 597
+ G P+ + TL++ N+ F +TED +
Sbjct: 683 ---SADGDPDADTGGSVAAAVAKAMVYTLFLTNIPFQTTEDEL 722
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
S RI + N+ Y TE+ L + GP+ V +P+ K+T + KG A V F E A +A
Sbjct: 368 SHRIRLGNIPYIATEEHLKQFAASLVGPVEAVHIPLTKDTRQNKGAAFVRFSSAEDAVRA 427
Query: 395 YQHLDGTVFLGRMLHL 410
Q G + +GR+L +
Sbjct: 428 LQLCRGAILMGRLLRV 443
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET------DKTKGFALVTFLMPEHA 391
++ V+NL + TE D+ +LF + + V +P T + +GFA V FL A
Sbjct: 867 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSSHRENNHRGFAFVEFLSEAEA 926
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A + L T GR L L
Sbjct: 927 ARALETLKATHLYGRHLVL 945
>gi|146079207|ref|XP_001463723.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134067810|emb|CAM66090.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 954
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 741
K++V+N+PF+A + +V ELF AF E++ VR+P+K HRGF FVEF+++ EA
Sbjct: 869 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSSHRENNHRGFAFVEFLSEAEA 928
Query: 742 KRAMKALCQSTHLYGRRLVLEWA 764
RA++ L ++THLYGR LVL++A
Sbjct: 929 ARALETL-KATHLYGRHLVLQYA 950
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 65/163 (39%), Gaps = 13/163 (7%)
Query: 437 AFNQVVEARSKRIILVKNLPYR--TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
A +++RS ILVKNL + +L LF FG L P G+ L +
Sbjct: 573 ATQNFLKSRSNTTILVKNLQLKDGNDAAELTKLFVRFGVLEASAFPSAGMFALFRYTHPQ 632
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
A+ AF L+Y FK PL+LEWAP G E E ++ G
Sbjct: 633 DARIAFTRLSYKLFKTAPLFLEWAPVGALMEDSEGGSAPAVAASDLGLTAGP-------- 684
Query: 555 EEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSI 597
+ G P+ + TL++ N+ F +TED +
Sbjct: 685 ---SADGDPDADTGGSVAAAVAKAMVYTLFLTNIPFQTTEDEL 724
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
S RI + N+ Y TE+ L + GP+ V +P+ K+T + KG A V F E A +A
Sbjct: 370 SHRIRLGNIPYIATEEHLKQFAASLVGPVEAVHIPLTKDTRQNKGAAFVRFSSAEDAVRA 429
Query: 395 YQHLDGTVFLGRMLHL 410
Q G + +GR+L +
Sbjct: 430 LQLCRGAILMGRLLRV 445
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET------DKTKGFALVTFLMPEHA 391
++ V+NL + TE D+ +LF + + V +P T + +GFA V FL A
Sbjct: 869 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSSHRENNHRGFAFVEFLSEAEA 928
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A + L T GR L L
Sbjct: 929 ARALETLKATHLYGRHLVL 947
>gi|398410055|ref|XP_003856481.1| hypothetical protein MYCGRDRAFT_31414 [Zymoseptoria tritici IPO323]
gi|339476366|gb|EGP91457.1| hypothetical protein MYCGRDRAFT_31414 [Zymoseptoria tritici IPO323]
Length = 740
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 146/325 (44%), Gaps = 26/325 (8%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR L T + LT+LF + P+ D T + +G+ VTF E A QA
Sbjct: 58 LFVRQLPSNTTSESLTELFSETFPVKHATAVTDPATKECRGYGFVTFADAEDAAQAKSQF 117
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
G + G+ L + +P++ + DG++ + ++ V+ ++V+NLP+
Sbjct: 118 HGHIIDGKKLRVEIAEPRKRVADADGEMPKKVEHNASKKPDEPVQPTK---LIVRNLPWS 174
Query: 459 TLPTD-LKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYTKFKEVP 512
D L+ LF FG + + +P G G V K A+ A + +
Sbjct: 175 IKRGDQLEKLFLSFGKVKKAYIPKKGPGLMAGFGFVLMRGKKNAEKAIEGVNGKEIDGRT 234
Query: 513 LYLEWAPE-GVFAEAKEKSKGKEKEKNEE--EGEEGEEEKKENTAE----EDNQQGVPEV 565
L ++WA E + + + K +E+ NEE + + EEE +N E + + G E+
Sbjct: 235 LAVDWAVEKDTYEDLVKGEKAEEEVSNEEDIDIDAAEEEMIDNDEEIESDDASSDGGAEL 294
Query: 566 EENVEEDEE----REPEP-DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
+ +EDE+ R+P+ +TL+I+NL F T++ + HF + G V
Sbjct: 295 DSEGDEDEDESNLRKPDDRSSTLFIRNLPFTCTDEDLEDHFAQFGNTRYARVV-----MD 349
Query: 621 PGQFLSMGYGFVQFYTRESLNQALK 645
G S G GFV FY ++ + ++
Sbjct: 350 YGTERSKGTGFVCFYNKDDADACVR 374
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 17/203 (8%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+L+++ L N+T +S+ F + P+ T P GYGFV F E
Sbjct: 57 SLFVRQLPSNTTSESLTELFSETFPVKHATAV-----TDPATKECRGYGFVTFADAEDAA 111
Query: 642 QALKVLQNSSLDEHQIELKRS---NRNLESEATTVKRKSSNVAKQTG-----SKILVRNI 693
QA +D ++ ++ + R +++ K+ N +K+ +K++VRN+
Sbjct: 112 QAKSQFHGHIIDGKKLRVEIAEPRKRVADADGEMPKKVEHNASKKPDEPVQPTKLIVRNL 171
Query: 694 PFQAKQS-EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
P+ K+ ++E+LF +FG++K +PKK G GL GFGFV K A++A++ +
Sbjct: 172 PWSIKRGDQLEKLFLSFGKVKKAYIPKK--GPGLMAGFGFVLMRGKKNAEKAIEGV-NGK 228
Query: 753 HLYGRRLVLEWAEEADNVEDIRK 775
+ GR L ++WA E D ED+ K
Sbjct: 229 EIDGRTLAVDWAVEKDTYEDLVK 251
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 172/426 (40%), Gaps = 95/426 (22%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
+S ++V +L+ TVTE L ++F+ GP+A + + D T ++ G+A V F A +A
Sbjct: 8 QSASLYVGDLNPTVTEALLFEIFKAVGPVASIRVCRDAVTRRSLGYAYVNFHNVVDAERA 67
Query: 395 YQHLDGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
L+ T+ GR ++ P K +GN
Sbjct: 68 LDTLNYTLIKGRPCRIMWSHRDPSIRKSGQGN---------------------------- 99
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLG-----RVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
I +KNL D KAL++ F G +V+ G + F+ ++AA +++A
Sbjct: 100 IFIKNLDK---SIDNKALYDTFSAFGNILSCKVVTDGKGNSKGYGFVHYETSEAADSAIA 156
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
K + + + G F KE++ G +
Sbjct: 157 KVNGKMLNGKIVYV--GRFIARKERTPGSD------------------------------ 184
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
PE T +YIKNL TE+ ++R F G + S + KDP+ G+
Sbjct: 185 ------------PEKFTNIYIKNLGEAYTEEDLKRDFGAFGTVQSAVLM--KDPRDIGR- 229
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT 684
+ FV F E+ ++A + L L + ++ + R+ + E E+ K + K
Sbjct: 230 ---QFAFVNFEDHEAAHRATEELNGRKLGDKEVYVGRAQKKSERESFLRKLREERAQKYQ 286
Query: 685 GSKILVRNIPFQAKQSEVEELFKA--FGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
G + ++N+ E+ +LF A FG++ ++ G+ RGFGFV + +A
Sbjct: 287 GINLYIKNLDDTVNDEELHKLFSALPFGQITSCKVMSDDKGN--SRGFGFVCYTNPEDAS 344
Query: 743 RAMKAL 748
+A+ +
Sbjct: 345 KAVSEM 350
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 23/171 (13%)
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
P +LY+ +LN TE + FK GP+AS+ V R + S+GY +V F+
Sbjct: 6 PYQSASLYVGDLNPTVTEALLFEIFKAVGPVASIRVCRDAVTRR-----SLGYAYVNFHN 60
Query: 637 RESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
+AL L + + + S+R+ ++ K I ++N+
Sbjct: 61 VVDAERALDTLNYTLIKGRPCRIMWSHRD------------PSIRKSGQGNIFIKNLDKS 108
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMV--GSGLHRGFGFVEFITKNEAKRAM 745
+ + F AFG + L K+V G G +G+GFV + T A A+
Sbjct: 109 IDNKALYDTFSAFGNI----LSCKVVTDGKGNSKGYGFVHYETSEAADSAI 155
>gi|123485368|ref|XP_001324476.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121907359|gb|EAY12253.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 576
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 42/208 (20%)
Query: 446 SKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAY 505
SK ++++KNL + T +L+ +F G L R ++ P +VEF + + A+ AFNSL Y
Sbjct: 376 SKTVLIIKNLRWETTEEELRGIFASKGTLVRFVLAPTHSVAIVEFARGDDARKAFNSLNY 435
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEV 565
+ P+Y++WAP+G + G G E +E K P+V
Sbjct: 436 RLLHDTPIYIQWAPDGC-------TTGT--------GVETDERK----------SCRPKV 470
Query: 566 EENVEEDEEREPEPDTTLYIKNLNFNSTEDS-IRRHFKKCGPIASVTVARKKDPKSPGQF 624
E TTL +KNL F T+ S I FK G I ++ + +K++ +
Sbjct: 471 EIKT-----------TTLIVKNLPFTVTKKSEIAEAFKHVGNIKAIRMTKKRNEQG---- 515
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSL 652
G+ F+ F TR++ A +Q+ L
Sbjct: 516 -HRGFCFIDFTTRQAAQAAFDAMQDVHL 542
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 17/191 (8%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T L IKNL + +TE+ +R F G + +A + V+F +
Sbjct: 378 TVLIIKNLRWETTEEELRGIFASKGTLVRFVLAP-----------THSVAIVEFARGDDA 426
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESE--ATTVKRKSSNVAKQT-GSKILVRNIPFQA 697
+A L L + I ++ + + T +RKS + + ++V+N+PF
Sbjct: 427 RKAFNSLNYRLLHDTPIYIQWAPDGCTTGTGVETDERKSCRPKVEIKTTTLIVKNLPFTV 486
Query: 698 -KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
K+SE+ E FK G +K +R+ KK G HRGF F++F T+ A+ A A+ Q HL G
Sbjct: 487 TKKSEIAEAFKHVGNIKAIRMTKKRNEQG-HRGFCFIDFTTRQAAQAAFDAM-QDVHLAG 544
Query: 757 RRLVLEWAEEA 767
R L+++ AEE
Sbjct: 545 RHLIVQPAEEG 555
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 33/270 (12%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +++L +F + G +TD ++ T GK R A+IGY ++A+ A YF+NT++ S RI
Sbjct: 18 VEEKELVKEFSKMGEITDCKVIRTERGKSRCIAYIGYKTVEEAEKAQKYFDNTFIQSRRI 77
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEH-TKDSKPGKKSKNDPTF 147
VE +G+ ++W++ +K I +Q+ + E +D+K K K DP F
Sbjct: 78 GVEFAIPIGEKQLDETWAR-------RKKFAKIEKQQEKQIEKFNRDNKDQPKEKFDPAF 130
Query: 148 SDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDTAPS 207
+FL H + + S DG EE+ +DE + + + E + + K ++ P
Sbjct: 131 QEFLAAHK---PRQMRASWNDGFGFEEQYQDEKEQESEKDNAEEEENNEEEQKKEEEKPV 187
Query: 208 DPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK--------PLPLASVRTTFLG 259
+ R Y VKN+P +++KA F+ LP + V G
Sbjct: 188 SITT---------TRLY----VKNIPYKSTAEEIKARFEEFGPVEDVSLPTSEVPGENRG 234
Query: 260 MAYIGFKDEKNCNKALNKNKSFWKGKQLNI 289
A++ F D ++ KA + F +G+ L +
Sbjct: 235 FAFVKFADLESATKAYMTSVIF-EGRHLQL 263
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+ R++V+N+ Y T +++ FE++GP+ +V LP + + +GFA V F E AT+AY
Sbjct: 191 TTRLYVKNIPYKSTAEEIKARFEEFGPVEDVSLPTSEVPGENRGFAFVKFADLESATKAY 250
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVD 423
+ +F GR L L +P+ + VD
Sbjct: 251 --MTSVIFEGRHLQLAQSEPEPEKKKVD 276
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
T +++ V+NIP+++ E++ F+ FG ++ V LP V G +RGF FV+F + +
Sbjct: 190 TTTRLYVKNIPYKSTAEEIKARFEEFGPVEDVSLPTSEV-PGENRGFAFVKFA---DLES 245
Query: 744 AMKALCQSTHLYGRRLVLEWAE 765
A KA S GR L L +E
Sbjct: 246 ATKAYMTSVIFEGRHLQLAQSE 267
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS--PGQFLSMGYGFVQFYTRE 638
T LY+KN+ + ST + I+ F++ GP+ V++ P S PG+ + G+ FV+F E
Sbjct: 192 TRLYVKNIPYKSTAEEIKARFEEFGPVEDVSL-----PTSEVPGE--NRGFAFVKFADLE 244
Query: 639 SLNQA 643
S +A
Sbjct: 245 SATKA 249
>gi|239606561|gb|EEQ83548.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis ER-3]
Length = 744
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 6/187 (3%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT+ F + PL + +D +T ++K + VTF E A +A +
Sbjct: 51 LFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKSYGFVTFADHEDAAKALEEF 110
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G+VF G+ L + +P+ E + G S K + N+ ++A+ ++I ++NLP+
Sbjct: 111 NGSVFDGKKLKIEVAEPRHREIDEKGGKSVSTSNLKQERENRKLQAQPPKLI-IRNLPWS 169
Query: 459 TL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
P L ALF FG + ++P G G V + A+ A ++ + L
Sbjct: 170 IAEPDQLAALFRSFGKVKHAVIPKRGTQHSGFGFVVLRGRKNAEKALEAVNGKEIDGRTL 229
Query: 514 YLEWAPE 520
++WA E
Sbjct: 230 AVDWAVE 236
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 20/196 (10%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L ++T +S+ +F + P+ TV DP++ S YGFV F E
Sbjct: 50 TLFVRSLPASATTESLTEYFSQSYPLKHATVVL--DPQTK---QSKSYGFVTFADHEDAA 104
Query: 642 QALKVLQNSSLDEHQIELKRSN-RNLESEATTVKRKSSNVAKQTGS---------KILVR 691
+AL+ S D +++++ + R+ E + K S++ KQ K+++R
Sbjct: 105 KALEEFNGSVFDGKKLKIEVAEPRHREIDEKGGKSVSTSNLKQERENRKLQAQPPKLIIR 164
Query: 692 NIPFQ-AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQ 750
N+P+ A+ ++ LF++FG++K +PK+ H GFGFV + A++A++A+
Sbjct: 165 NLPWSIAEPDQLAALFRSFGKVKHAVIPKRGT---QHSGFGFVVLRGRKNAEKALEAV-N 220
Query: 751 STHLYGRRLVLEWAEE 766
+ GR L ++WA E
Sbjct: 221 GKEIDGRTLAVDWAVE 236
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 31/200 (15%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFLGMAYIGFKDEKNCNKALN 276
T+ V++LPA + L YF PL A+V ++ F D ++ KAL
Sbjct: 49 RTLFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKSYGFVTFADHEDAAKALE 108
Query: 277 K-NKSFWKGKQLNIY----KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE 331
+ N S + GK+L I ++ + + + N EN K +
Sbjct: 109 EFNGSVFDGKKLKIEVAEPRHREIDEKGGKSVSTSNLKQERENRKLQ------------- 155
Query: 332 DIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
A+ ++ +RNL +++ E D L LF +G + ++P K + GF V ++
Sbjct: 156 --AQPPKLIIRNLPWSIAEPDQLAALFRSFGKVKHAVIP--KRGTQHSGFGFVVLRGRKN 211
Query: 391 ATQAYQHLDGTVFLGRMLHL 410
A +A + ++G GR L +
Sbjct: 212 AEKALEAVNGKEIDGRTLAV 231
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IF+RNL ++ T++ L + F ++GPL + +D ETD+ +G A V F E A
Sbjct: 325 IFIRNLPFSATDETLYEHFVQFGPLRYARVVVDPETDRPRGTAFVCFWKHEDA 377
>gi|412991277|emb|CCO16122.1| predicted protein [Bathycoccus prasinos]
Length = 620
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 174/420 (41%), Gaps = 80/420 (19%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A + ++V +L + TE L +LF GP+ + + D T ++ G+A V F + A +
Sbjct: 40 ASNTSLYVGDLESSATEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFSQAQDAAR 99
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A L+ ++ GKP + S+R + + I +K
Sbjct: 100 AIDVLN--------FQVVNGKP----------IRILYSQR-----DPTIRKSGVGNIFIK 136
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
NL L+ F FG++ V G NS Y
Sbjct: 137 NLDKDIDTVALRDTFAQFGNIVSAKVATDG---------------QGNSKGYG------- 174
Query: 514 YLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDE 573
++++ E EA EK G E N++ G +++ ++G E + N
Sbjct: 175 FIQFDTEAAAKEAIEKVNGMEL--NDKVVYVGPFQRRA-------ERGTTETKFN----- 220
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
+++KNL T++ +R+ F+ GP+ SV +++ +D KS G+GFV
Sbjct: 221 --------NVFVKNLGDEVTDEELRKVFEGFGPVTSVMISKDEDGKSK------GFGFVC 266
Query: 634 FYTRESLNQALKVLQNSSLDEHQIEL-----KRSNRNLESEATTVKRKSSNVAKQTGSKI 688
+ T E ++A++ L +E + + K++ R E +A + + K G+ +
Sbjct: 267 YETPEDASKAVEELDGKHGEEDKKWVVCRAQKKAEREAELKAKFEAERRERMEKMAGANL 326
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
++N+ A + ELFK FG + R+ + SG+ RG FV F + EA RA+ L
Sbjct: 327 YIKNLEDGADDETLRELFKEFGTITSCRVMRD--ASGVSRGSAFVAFSSPEEATRAVTEL 384
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 34/196 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV+NL VT+++L K+FE +GP+ V++ D E K+KGF V + PE A++A + L
Sbjct: 222 VFVKNLGDEVTDEELRKVFEGFGPVTSVMISKD-EDGKSKGFGFVCYETPEDASKAVEEL 280
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQV---VEA-RSKRI----- 449
DG G D K C +++K + ++ EA R +R+
Sbjct: 281 DG-----------------KHGEEDKKWVVCRAQKKAEREAELKAKFEAERRERMEKMAG 323
Query: 450 --ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNS 502
+ +KNL L+ LF+ FG + RV+ G+ + V F +A A
Sbjct: 324 ANLYIKNLEDGADDETLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPEEATRAVTE 383
Query: 503 LAYTKFKEVPLYLEWA 518
L PLY+ A
Sbjct: 384 LNGKMVGAKPLYVALA 399
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 163/437 (37%), Gaps = 111/437 (25%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------FLGMAYIGFKDEKNCNKALNK 277
++ V +L + + L F + P+ S+R LG AY+ F ++ +A++
Sbjct: 44 SLYVGDLESSATEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFSQAQDAARAIDV 103
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N GK + I +D + + SG
Sbjct: 104 LNFQVVNGKPIRILYSQRDPTIRKSGV--------------------------------- 130
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G IF++NL + L F ++G + + D + + +KG+ + F A +A +
Sbjct: 131 GNIFIKNLDKDIDTVALRDTFAQFGNIVSAKVATDGQGN-SKGYGFIQFDTEAAAKEAIE 189
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
++G +++++ P + + G + K FN V VKNL
Sbjct: 190 KVNGMELNDKVVYVGPFQRRAERGTTETK------------FNNV---------FVKNLG 228
Query: 457 YRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLE 516
+L+ +FE FG + V++ ++ F + Y E P
Sbjct: 229 DEVTDEELRKVFEGFGPVTSVMISK----------DEDGKSKGFGFVCY----ETP---- 270
Query: 517 WAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK------ENTAEEDNQQGVPEVEENVE 570
++ SK E E +G+ GEE+KK + AE + + + + E
Sbjct: 271 ----------EDASKAVE----ELDGKHGEEDKKWVVCRAQKKAEREAEL---KAKFEAE 313
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
E E LYIKNL + ++++R FK+ G I S V R +S G
Sbjct: 314 RRERMEKMAGANLYIKNLEDGADDETLRELFKEFGTITSCRVMRD------ASGVSRGSA 367
Query: 631 FVQFYTRESLNQALKVL 647
FV F + E +A+ L
Sbjct: 368 FVAFSSPEEATRAVTEL 384
>gi|258568356|ref|XP_002584922.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906368|gb|EEP80769.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 745
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 143/336 (42%), Gaps = 51/336 (15%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT+ F + P+ D +T + KG+ VTF E A +A + L
Sbjct: 48 LFVRSLPASATTESLTEYFSQSYPIKHATAVADPQTKQCKGYGFVTFTDVEDAQRALEEL 107
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI----ILVKN 454
+G++F GR + + +P+ E +D KV + + + E R K ++V+N
Sbjct: 108 NGSIFDGRKIVIEVAEPRRRE--IDEKVGKSVPSAEATKVKEEREQRRKDAQPPKLIVRN 165
Query: 455 LPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFK 509
LP+ P L LF +G + +P G G + K A+ A + +
Sbjct: 166 LPWSVKEPEQLAVLFRSYGKVKHADIPRKGTRHSGFGFIVMRGKKNAEKAIEGVNGKELD 225
Query: 510 EVPLYLEWAPEG-VFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN 568
L ++WA + V+ + + E++ E+E + E + ED +G E +E
Sbjct: 226 GRTLAVDWAVDKEVWQNLHQSTDDSEQKIAEDEAADNE---GMGSGVEDGSEGSDEADEI 282
Query: 569 VEEDEEREPEPD---------------------------TTLYIKNLNFNSTEDSIRRHF 601
V + + D +T++I+NL F +T++++ HF
Sbjct: 283 VSDVDAAMEHVDISGSESEEDEEEEDEEDDEGEEDDRNASTIFIRNLPFGATDETLGEHF 342
Query: 602 KKCGPI--ASVTVARKKDPKSPGQFLSMGYGFVQFY 635
+ G + A V V DP++ G FV F+
Sbjct: 343 AQFGAVRYARVVV----DPETD---RPRGTAFVCFW 371
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 109/211 (51%), Gaps = 23/211 (10%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L ++T +S+ +F + PI T DP++ GYGFV F E
Sbjct: 47 TLFVRSLPASATTESLTEYFSQSYPIKHATAV--ADPQTK---QCKGYGFVTFTDVEDAQ 101
Query: 642 QALKVLQNSSLDEHQIELKRS---NRNLE---------SEATTVKRKSSNVAKQTG-SKI 688
+AL+ L S D +I ++ + R ++ +EAT VK + K K+
Sbjct: 102 RALEELNGSIFDGRKIVIEVAEPRRREIDEKVGKSVPSAEATKVKEEREQRRKDAQPPKL 161
Query: 689 LVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
+VRN+P+ K+ E + LF+++G++K +P+K H GFGF+ K A++A++
Sbjct: 162 IVRNLPWSVKEPEQLAVLFRSYGKVKHADIPRKGT---RHSGFGFIVMRGKKNAEKAIEG 218
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRKRTN 778
+ L GR L ++WA + + +++ + T+
Sbjct: 219 V-NGKELDGRTLAVDWAVDKEVWQNLHQSTD 248
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTF 257
P+D V+++ K T+ V++LPA + L YF P+ A+
Sbjct: 27 PNDEPAEKVAQSTSKKAVRRTLFVRSLPASATTESLTEYFSQSYPIKHATAVADPQTKQC 86
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
G ++ F D ++ +AL + N S + G+++ I + + D+ S+ + +
Sbjct: 87 KGYGFVTFTDVEDAQRALEELNGSIFDGRKIVI-----EVAEPRRREIDEKVGKSVPSAE 141
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETD 375
A K +E+ Q +D A+ ++ VRNL ++V E + L LF YG + +P ++
Sbjct: 142 AT--KVKEEREQRRKD-AQPPKLIVRNLPWSVKEPEQLAVLFRSYGKVKHADIP--RKGT 196
Query: 376 KTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+ GF + ++A +A + ++G GR L +
Sbjct: 197 RHSGFGFIVMRGKKNAEKAIEGVNGKELDGRTLAV 231
>gi|29841211|gb|AAP06224.1| similar to hypothetical RNA-binding protein KIAA0682; hypothetical
protein with RRM domain, similar to hypothetical
RNA-binding protein KIAA0682 [Schistosoma japonicum]
Length = 173
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 21/180 (11%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKN 278
V K H VK L VK KD+K +FKP+ + R GM F+++++ ++AL K
Sbjct: 2 VLKTAAHVAKVKGLSREVKIKDVKKFFKPIRIKDFRVLKNGMGIAFFRNDRDLSEALKKK 61
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHW--KSQEDSV------QFA 330
S G+ + I ++ + D + + W K+ E++V +F
Sbjct: 62 GSVC-GRVVRIEEHVRK----------DQETTTEQKSAQSSWPVKTSEETVSAILESKFT 110
Query: 331 E--DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP 388
+ + ++GR+FVRNL Y TE +L KLF YG L+++ L D + +KGFA VT+L P
Sbjct: 111 QFYIMLQTGRLFVRNLPYDCTEKELEKLFSPYGSLSDIHLAFDSWSQVSKGFAFVTYLFP 170
>gi|312091342|ref|XP_003146944.1| hypothetical protein LOAG_11375 [Loa loa]
Length = 183
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 76/136 (55%), Gaps = 11/136 (8%)
Query: 551 ENTAEEDNQQGVPEVE--------ENVEEDEEREPE---PDTTLYIKNLNFNSTEDSIRR 599
E A + + Q EVE E+ +D E E + P TTL++KNL+F +T++ ++
Sbjct: 36 ETIARDGDMQQRAEVEKYMAEIRNEDSNDDAEEEDDRLLPGTTLFVKNLSFKTTDEGLKN 95
Query: 600 HFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
F+ I S TV++K+D P + LSMG+GF+ FY E QA+K +Q LD H + L
Sbjct: 96 KFESRFRIRSATVSKKRDAVDPTKALSMGFGFITFYQPEDAQQAIKEMQGVLLDGHCLML 155
Query: 660 KRSNRNLESEATTVKR 675
K S+R + + T ++
Sbjct: 156 KLSHREVVPDKITARK 171
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE-TDKTK----GFALVTFLMPEHATQ 393
+FV+NLS+ T++ L FE + + ++ D TK GF +TF PE A Q
Sbjct: 79 LFVKNLSFKTTDEGLKNKFESRFRIRSATVSKKRDAVDPTKALSMGFGFITFYQPEDAQQ 138
Query: 394 AYQHLDGTVFLGRMLHL-------IPGKPKENEGNVD 423
A + + G + G L L +P K +G V+
Sbjct: 139 AIKEMQGVLLDGHCLMLKLSHREVVPDKITARKGVVE 175
>gi|255949670|ref|XP_002565602.1| Pc22g16890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592619|emb|CAP98977.1| Pc22g16890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 724
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 23/201 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L ++T +S+ +F + I V K+ K+ S G+GFV F E
Sbjct: 37 TLFVRSLPTSATTESLAEYFSQSYIIKHAVVVCDKETKA-----SKGFGFVTFADVEDAE 91
Query: 642 QALKVLQNSSLDEHQIEL-----------KRSNRNLESEATTVKRKSSNVAKQTG--SKI 688
ALK L S D I + ++ R++ + A+ +K + G K+
Sbjct: 92 SALKELNGSKFDGKVIRVDYAESRKREIDEKVGRSVPTAASRESKKQKEEERGQGLPPKL 151
Query: 689 LVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
+VRN+P+ K+ E + LF++FG++KF LPK+ +G GFGF+ + A+RA++
Sbjct: 152 IVRNLPWSIKEPEDLNVLFRSFGKVKFATLPKR---NGKLSGFGFITMRGRKNAERALQ- 207
Query: 748 LCQSTHLYGRRLVLEWAEEAD 768
+ + GR+L ++WA E D
Sbjct: 208 MINGKEIDGRQLAVDWAVEKD 228
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + L + F + + ++ DKET +KGF VTF E A A + L
Sbjct: 38 LFVRSLPTSATTESLAEYFSQSYIIKHAVVVCDKETKASKGFGFVTFADVEDAESALKEL 97
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCI-SERKLDAFNQVVEARSKRI---ILVKN 454
+G+ F G+++ + + ++ E +D KV + + ++ Q E R + + ++V+N
Sbjct: 98 NGSKFDGKVIRVDYAESRKRE--IDEKVGRSVPTAASRESKKQKEEERGQGLPPKLIVRN 155
Query: 455 LPYRTL-PTDLKALFEPFGDLGRVLVPPY-GITGLVEFLQKNQAKAAFNSLAYTKFKEV- 511
LP+ P DL LF FG + +P G F+ K A +L KE+
Sbjct: 156 LPWSIKEPEDLNVLFRSFGKVKFATLPKRNGKLSGFGFITMRGRKNAERALQMINGKEID 215
Query: 512 --PLYLEWAPE 520
L ++WA E
Sbjct: 216 GRQLAVDWAVE 226
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEK-YGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IF+RNL +T T+ L F+ +GPL + +D ET++ +G V F P+ A
Sbjct: 306 IFIRNLPFTATDQVLYDHFKTHFGPLRYARVVLDYETERPRGTGFVCFWKPDDA 359
>gi|297834512|ref|XP_002885138.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330978|gb|EFH61397.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 542
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 187/471 (39%), Gaps = 94/471 (19%)
Query: 321 KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGF 380
KS+ +++ + + ++V +LS VTE DL F P+ V L + T K+ +
Sbjct: 5 KSETQALENHQHSSMFASLYVGDLSPDVTEQDLIHRFSLTVPVLSVHLCRNSVTGKSLCY 64
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQ 440
A + F P A+ A L+ T G+ + ++ + +S R+ F
Sbjct: 65 AYINFDSPFSASNAMARLNHTDLKGKAMRIMWSQRD-------------LSYRRRTGFGN 111
Query: 441 VVEARSKRIILVKNLPYRTLPTDLKALFEPFG-DLGRVLVPPYGIT---GLVEFLQKNQA 496
+ VKNL + L+ +F PFG L +V G + G V+F + A
Sbjct: 112 ---------LYVKNLDISITSSGLERMFNPFGVILSCKVVEENGQSKGFGFVQFETEQSA 162
Query: 497 KAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEE 556
A ++L G + K+ K KNE G +
Sbjct: 163 VTARSAL----------------HGSMVDGKKLFVAKFINKNERVAMAGNK--------- 197
Query: 557 DNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK 616
T +Y+KNL N TED + R F + G ++SV V R
Sbjct: 198 ----------------------GFTNVYVKNLIENITEDILHRLFSQYGTVSSVVVMRD- 234
Query: 617 DPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQI----ELKRSNRNLESEATT 672
G S G+GFV F E+ +A+ L + + LKR R E
Sbjct: 235 -----GMGRSRGFGFVNFCHPENAKKAVDSLHGRQVGSKTLFVGKALKRDERR---EMLK 286
Query: 673 VKRKSSNVAKQT--GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
K + + +AK S + V+N+ + + E+F +G++ ++ + +G +GF
Sbjct: 287 HKYRDNFIAKSNMRWSNLYVKNLSESMNDTTLREIFGRYGQIVSAKVMRHE--NGRSKGF 344
Query: 731 GFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
GFV F + E+K+A + L + G+ LV+ AE ED KR +YF
Sbjct: 345 GFVCFSNREESKQAKRYL-NGFSVDGKLLVVRVAERK---EDRLKRLQQYF 391
>gi|67528248|ref|XP_661934.1| hypothetical protein AN4330.2 [Aspergillus nidulans FGSC A4]
gi|40741301|gb|EAA60491.1| hypothetical protein AN4330.2 [Aspergillus nidulans FGSC A4]
gi|259482863|tpe|CBF77747.1| TPA: ribosome biogenesis (Nop4), putative (AFU_orthologue;
AFUA_4G06250) [Aspergillus nidulans FGSC A4]
Length = 724
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 114/222 (51%), Gaps = 25/222 (11%)
Query: 568 NVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSM 627
NV+ED +P + L+I++L ++T +S+ HF + I V DPK+ S
Sbjct: 26 NVQEDGATQPRRE--LFIRSLPASATNESLAEHFSQSYVIKHAVVV--VDPKTK---QSK 78
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV-------------K 674
GYGFV F E AL+ L S+ + +I+++ + TV K
Sbjct: 79 GYGFVTFADVEDAKAALEELNGSTFEGKKIKVEYAQPRHRVVDETVGKSVPSAEALERKK 138
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
++ A K++VRN+P+ K E + F++FG++K+V LPKK GS L GFGFV
Sbjct: 139 QREQQKADTQPPKLIVRNLPWSIKTPEDLAAHFRSFGKVKYVTLPKK--GSQLA-GFGFV 195
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRK 775
K A++A++A+ + GR L ++WA E + E+++K
Sbjct: 196 VLRGKKNAEKALEAV-NGKEVDGRTLAVDWAVEKEVWENLQK 236
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 153/355 (43%), Gaps = 59/355 (16%)
Query: 322 SQEDSVQFAEDIAESGR--IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKG 379
S +++VQ ED A R +F+R+L + T + L + F + + ++ +D +T ++KG
Sbjct: 22 SSKNNVQ--EDGATQPRRELFIRSLPASATNESLAEHFSQSYVIKHAVVVVDPKTKQSKG 79
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCIS-----ERK 434
+ VTF E A A + L+G+ F G+ + + +P+ VD V + ERK
Sbjct: 80 YGFVTFADVEDAKAALEELNGSTFEGKKIKVEYAQPRHR--VVDETVGKSVPSAEALERK 137
Query: 435 LDAFNQVVEARSKRIILVKNLPYRT-LPTDLKALFEPFGDLGRVLVPPYGIT----GLVE 489
Q + + ++I V+NLP+ P DL A F FG + V +P G G V
Sbjct: 138 KQREQQKADTQPPKLI-VRNLPWSIKTPEDLAAHFRSFGKVKYVTLPKKGSQLAGFGFVV 196
Query: 490 FLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEK 549
K A+ A ++ + L ++WA EK + +K EE E +E+
Sbjct: 197 LRGKKNAEKALEAVNGKEVDGRTLAVDWAV--------EKEVWENLQKEEEHAEPDVKEE 248
Query: 550 KENTAEEDNQQGV-----------------------------PEVEENVEEDEEREPEPD 580
+ ED G+ E EE EE+E+ +
Sbjct: 249 SSDVDMEDGGVGLDNGELDEDMSEDDDEEDDEVSDEEDEDEDEEEEEEEEEEEKEDERNA 308
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
+T++I+NL F ++S+ HF + GP+ + + + P G GFV F+
Sbjct: 309 STIFIRNLPFTCDDESLYDHFTQFGPLRYARIVVDPETERP-----RGTGFVCFW 358
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
IF+RNL +T ++ L F ++GPL + +D ET++ +G V F PEHA Q
Sbjct: 311 IFIRNLPFTCDDESLYDHFTQFGPLRYARIVVDPETERPRGTGFVCFWKPEHAQACVQ 368
>gi|378729309|gb|EHY55768.1| hypothetical protein HMPREF1120_03892 [Exophiala dermatitidis
NIH/UT8656]
Length = 784
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 153/376 (40%), Gaps = 77/376 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L +VT + LT+ F + P+ + +D +T ++GF VTF+ E A
Sbjct: 49 LFVRSLPASVTTERLTEFFSELFPIKHATVVLDPQTKVSRGFGFVTFVDAEDTQAALAQF 108
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI--------- 449
+ V GR + + + + + D V +K N E ++I
Sbjct: 109 NNAVLDGRKIKVEIAEARHRD-TEDAAVAGAEGTKKKGGKNITAEKIREQIQKSRAEVQP 167
Query: 450 --ILVKNLPYRTLP-TDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAF 500
++V+NLP+ DL ALF +G + +VP YG G+V K A+ A
Sbjct: 168 PRLIVRNLPWSIKDGDDLAALFRSYGKVKHAVVPKKGPRVQYGF-GIVVLRGKKNAEKAI 226
Query: 501 NSLAYTKFKEVPLYLEWAPE---------------GVFAEAKEKSKGKEKEKNEE----- 540
+ L ++WA + G + ++ S+ +E K ++
Sbjct: 227 AGVNGKVVDGRTLAVDWAVDKQTWEELQQQQQQQQGGTTDTRQASEAEEGNKVQDNAKAD 286
Query: 541 -----EGEEGEEE-------------------------KKENTAEEDNQQGVPEVEENVE 570
EG + +EE E AEE+N + + E E + E
Sbjct: 287 GITASEGADSDEEDLQEEEHIHDDDDTDASDDGSDEDVSDELDAEEENDEDLSEAESD-E 345
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK-CGPIASVTVARKKDPKSPGQFLSMGY 629
D R+ D+T++I+NL F + +D ++ HF + GP+ V DP+ S G
Sbjct: 346 GDRNRDTRNDSTVFIRNLPFTADDDILKEHFSQHFGPVRYARVV--YDPEIE---RSRGT 400
Query: 630 GFVQFYTRESLNQALK 645
FV F+ +E + +K
Sbjct: 401 AFVCFFNQEDAKECVK 416
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 32/216 (14%)
Query: 573 EEREPEPD--TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
E+++P D +L++++L + T + + F + PI TV DP++ +S G+G
Sbjct: 37 EDQQPTKDHRRSLFVRSLPASVTTERLTEFFSELFPIKHATVVL--DPQTK---VSRGFG 91
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRS---NRNLESEAT-----TVKRKSSNV-- 680
FV F E AL N+ LD +I+++ + +R+ E A T K+ N+
Sbjct: 92 FVTFVDAEDTQAALAQFNNAVLDGRKIKVEIAEARHRDTEDAAVAGAEGTKKKGGKNITA 151
Query: 681 -----------AKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHR 728
A+ +++VRN+P+ K + + LF+++G++K +PKK G +
Sbjct: 152 EKIREQIQKSRAEVQPPRLIVRNLPWSIKDGDDLAALFRSYGKVKHAVVPKK--GPRVQY 209
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
GFG V K A++A+ A + GR L ++WA
Sbjct: 210 GFGIVVLRGKKNAEKAI-AGVNGKVVDGRTLAVDWA 244
>gi|358365933|dbj|GAA82554.1| ribosome biogenesis [Aspergillus kawachii IFO 4308]
Length = 721
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 109/213 (51%), Gaps = 26/213 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
+P L++++L ++T +S+ +F + I DP++ S GYGFV F
Sbjct: 35 QPRRELFVRSLPASTTTESLTEYFSQSYVIKHAVAV--TDPETK---QSKGYGFVTFADL 89
Query: 638 ESLNQALKVLQNSSLDEHQIE--------------LKRSNRNLESEATTVKRKSSNVAKQ 683
E AL+ S + +I+ L RS + E+ KR+ A Q
Sbjct: 90 EDAKAALEEFNGSVFEGKKIKVEYAQPRHRVVDENLGRSKPSAEALEQKKKREDQRAAAQ 149
Query: 684 TGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
K++VRN+P+ K+ E + LF++FG++K+V LPKK GS L GFGFV K A+
Sbjct: 150 --PKLIVRNLPWSIKEPEDLAVLFRSFGKVKYVTLPKK--GSQLA-GFGFVVLRGKKNAE 204
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEADNVEDIRK 775
+A++A+ + GR L ++WA E + ED++K
Sbjct: 205 KALQAV-NGKEVDGRTLAVDWAVEKNVWEDLQK 236
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT+ F + + + D ET ++KG+ VTF E A A +
Sbjct: 40 LFVRSLPASTTTESLTEYFSQSYVIKHAVAVTDPETKQSKGYGFVTFADLEDAKAALEEF 99
Query: 399 DGTVFLGRMLHLIPGKPK-----ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+G+VF G+ + + +P+ EN G ++K + +Q A+ K ++V+
Sbjct: 100 NGSVFEGKKIKVEYAQPRHRVVDENLGRSKPSAEALEQKKKRE--DQRAAAQPK--LIVR 155
Query: 454 NLPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKF 508
NLP+ P DL LF FG + V +P G G V K A+ A ++ +
Sbjct: 156 NLPWSIKEPEDLAVLFRSFGKVKYVTLPKKGSQLAGFGFVVLRGKKNAEKALQAVNGKEV 215
Query: 509 KEVPLYLEWAPE 520
L ++WA E
Sbjct: 216 DGRTLAVDWAVE 227
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 213 PVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLA--SVRTT------FLGMAYIG 264
P + P + + V++LPA + L YF + +V T G ++
Sbjct: 26 PAQETPASNQPRRELFVRSLPASTTTESLTEYFSQSYVIKHAVAVTDPETKQSKGYGFVT 85
Query: 265 FKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA-KHWKS 322
F D ++ AL + N S ++GK++ + +Y++ D+N S + +A + K
Sbjct: 86 FADLEDAKAALEEFNGSVFEGKKIKV-EYAQPRHR----VVDENLGRSKPSAEALEQKKK 140
Query: 323 QEDSVQFAEDIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKTKGFA 381
+ED + A ++ VRNL +++ E +DL LF +G + V LP K+ + GF
Sbjct: 141 RED-----QRAAAQPKLIVRNLPWSIKEPEDLAVLFRSFGKVKYVTLP--KKGSQLAGFG 193
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
V ++A +A Q ++G GR L +
Sbjct: 194 FVVLRGKKNAEKALQAVNGKEVDGRTLAV 222
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
IF+RNL +T +D L + F ++GPL + +D ET++ +G F P+ A
Sbjct: 310 IFIRNLPFTCDDDMLYEHFTQFGPLRYARIVVDHETERPRGTGFACFWKPDDAA 363
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 159/418 (38%), Gaps = 83/418 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VT+ L F + GP+ V + D T ++ G+ V F P+ A +A Q L
Sbjct: 38 LYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQEL 97
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ G+ + ++ H S R+ A N I +KNL
Sbjct: 98 NYIPLYGKPIRVM-------------YSHRDPSVRRSGAGN----------IFIKNLDES 134
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
D KAL + F G ++ K A +S
Sbjct: 135 I---DHKALHDTFSVFGNIV----------------SCKVAVDS---------------- 159
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
+ K G + NEE ++ E K D Q V E D
Sbjct: 160 ------SGQSKGYGFVQYANEESAQKAIE-KLNGMLLNDKQVYVGPFLRRQERDSTANKT 212
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +Y+KNL ++T+D ++ F + G I S V + D K S G+GFV F +
Sbjct: 213 KFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGDGK------SKGFGFVNFENAD 266
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA----KQTGSKILVRNIP 694
+A++ L D+ + + R+ + E E R N+ K S + V+N+
Sbjct: 267 DAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLD 326
Query: 695 FQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
+++E+F FG + K +R P +G +G GFV F T EA AM L
Sbjct: 327 PSISDEKLKEIFSPFGTVTSCKVMRDP-----NGTSKGSGFVAFSTPEEATEAMSQLS 379
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+ N T+ + F + GP+ SV V R + S+GYG+V F +
Sbjct: 36 TSLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRR-----SLGYGYVNFTNPQDA 90
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A++ L L I + S+R+ +V+R + I ++N+
Sbjct: 91 ARAIQELNYIPLYGKPIRVMYSHRD-----PSVRRSGAG-------NIFIKNLDESIDHK 138
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F FG + V + SG +G+GFV++ + A++A++ L
Sbjct: 139 ALHDTFSVFGNI--VSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKL 184
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 102/489 (20%), Positives = 182/489 (37%), Gaps = 110/489 (22%)
Query: 192 MEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHT--IVVKNLPAGVKKKDLKAYFKPL- 248
M ++L+ ++ + + + PV+ + T + V +L V L F +
Sbjct: 1 MAQVQLQGQTPNGSTVAVTSAPVTSGGATAAGFGTTSLYVGDLDVNVTDSQLFDAFSQMG 60
Query: 249 PLASVRTT-------FLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKY 300
P+ SVR LG Y+ F + ++ +A+ + N GK + + +D S +
Sbjct: 61 PVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRR 120
Query: 301 SGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
SGA G IF++NL ++ L F +
Sbjct: 121 SGA---------------------------------GNIFIKNLDESIDHKALHDTFSVF 147
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
G + + +D + ++KG+ V + E A +A + L+G + + +++ P ++
Sbjct: 148 GNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERD 206
Query: 421 NVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP 480
+ K F V VKNL T DLK F +G + +V
Sbjct: 207 STANKTK----------FTNV---------YVKNLAESTTDDDLKNAFGEYGKITSAVVM 247
Query: 481 PYGIT-----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEK 535
G G V F + A A SL KF + KE G+ +
Sbjct: 248 KDGDGKSKGFGFVNFENADDAARAVESLNGHKFDD----------------KEWYVGRAQ 291
Query: 536 EKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTED 595
+K+E E E E+N++E ++ + LY+KNL+ + +++
Sbjct: 292 KKSERETELRV-----------------RYEQNLKEAADKFQS--SNLYVKNLDPSISDE 332
Query: 596 SIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEH 655
++ F G + S V R DP S G GFV F T E +A+ L ++
Sbjct: 333 KLKEIFSPFGTVTSCKVMR--DPNG----TSKGSGFVAFSTPEEATEAMSQLSGKMIESK 386
Query: 656 QIELKRSNR 664
+ + + R
Sbjct: 387 PLYVAIAQR 395
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 93/208 (44%), Gaps = 28/208 (13%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKDEKN 270
+K ++ + VKNL DLK F + + + G ++ F++ +
Sbjct: 210 NKTKFTNVYVKNLAESTTDDDLKNAFGEY--GKITSAVVMKDGDGKSKGFGFVNFENADD 267
Query: 271 CNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA 330
+A+ + LN +K+ D+ Y G A + E ++ ++ E +++ A
Sbjct: 268 AARAV---------ESLNGHKF--DDKEWYVGRAQKKSERETE-LRVRY----EQNLKEA 311
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
D +S ++V+NL +++++ L ++F +G + + D +KG V F PE
Sbjct: 312 ADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDP-NGTSKGSGFVAFSTPEE 370
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
AT+A L G + + L++ + KE+
Sbjct: 371 ATEAMSQLSGKMIESKPLYVAIAQRKED 398
>gi|156048606|ref|XP_001590270.1| hypothetical protein SS1G_09035 [Sclerotinia sclerotiorum 1980]
gi|154693431|gb|EDN93169.1| hypothetical protein SS1G_09035 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 753
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 152/375 (40%), Gaps = 76/375 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T T LT+LF PL + +D T ++KG+ VTF E A +A
Sbjct: 42 LFVRSLPATATTSALTELFSDNYPLKHATVVLDPVTKQSKGYGFVTFADAEDAQRALDEF 101
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQ---VVEARSKRI------ 449
+G F GR + + +P+ E +RK + V +AR +++
Sbjct: 102 NGQSFQGRKMKIEIAQPRSRETIAKSGEEGLPVKRKSAIATEAAVVKKARQEKLAESKAP 161
Query: 450 --ILVKNLPYRT-LPTDLKALFEPFGDLGRVLVPPY-GITGLVEFLQKNQAKAAFNSLAY 505
++++NLP+ P +L LF FG + +P G F+ K A +LA
Sbjct: 162 PKLIIRNLPWSVKTPDELAKLFMGFGKVKYATLPKVKGKEAGFGFIVMRGKKNAEKALAA 221
Query: 506 TKFKEV---PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQG- 561
+E+ L ++WA E + EK K ++ + ++ E E E E+ N A++D++
Sbjct: 222 VNGREIDGRQLAVDWAVE---KDVWEKKKTEDADMSDAESREDEPEEPNNKADDDDEDVD 278
Query: 562 ------VPEVEENVEEDEEREPEP------------------------------------ 579
+ + +E ++E +PE
Sbjct: 279 DDVANFMKNFGDQLESEDESDPEAVEDNEDDIEDEDDEDDDNEDVDDFEDMDDDEEEEEK 338
Query: 580 ---------DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
+TL+I+NL F + + +++ HF++ GP+ V K P G G
Sbjct: 339 PKKNFITDNSSTLFIRNLPFTTLDATLKEHFEQFGPVRYARVVMDKATDRP-----KGTG 393
Query: 631 FVQFYTRESLNQALK 645
FV FY E + +
Sbjct: 394 FVCFYNVEDADSCFR 408
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+L++++L +T ++ F P+ TV P S GYGFV F E
Sbjct: 41 SLFVRSLPATATTSALTELFSDNYPLKHATVVL-----DPVTKQSKGYGFVTFADAEDAQ 95
Query: 642 QALKVLQNSSLDEHQIELK----RSNRNLE---SEATTVKRKSS-----NVAKQTGS--- 686
+AL S +++++ RS + E VKRKS+ V K+
Sbjct: 96 RALDEFNGQSFQGRKMKIEIAQPRSRETIAKSGEEGLPVKRKSAIATEAAVVKKARQEKL 155
Query: 687 -------KILVRNIPFQAKQ-SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
K+++RN+P+ K E+ +LF FG++K+ LPK G GFGF+ K
Sbjct: 156 AESKAPPKLIIRNLPWSVKTPDELAKLFMGFGKVKYATLPKV---KGKEAGFGFIVMRGK 212
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
A++A+ A+ + GR+L ++WA E D
Sbjct: 213 KNAEKALAAV-NGREIDGRQLAVDWAVEKD 241
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +F+RNL +T + L + FE++GP+ + +DK TD+ KG V F E A +
Sbjct: 348 SSTLFIRNLPFTTLDATLKEHFEQFGPVRYARVVMDKATDRPKGTGFVCFYNVEDADSCF 407
Query: 396 QHL 398
++
Sbjct: 408 RNC 410
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 164/415 (39%), Gaps = 85/415 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +VT+ L LF + G + V + D T ++ G+ V + + AT+A L
Sbjct: 42 LYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDVL 101
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T P N+ + +S R D ++ A + I +KNL
Sbjct: 102 NFT-------------PLNNK-----TIRVSVSRR--DPTDRKSGAGN---IFIKNLDKS 138
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
D+KAL E F G ++ K A
Sbjct: 139 I---DIKALHETFSSFGTII----------------SCKIA------------------- 160
Query: 519 PEGVFAEAKEKSKGKE-KEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREP 577
+A +SKG + + EE + +K D Q V + D E
Sbjct: 161 -----TDASGQSKGYGFVQYDSEEAAQTAIDKLNGMLMNDKQVYVGVFLRKQDRDSEMSK 215
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
+Y+KNL+ +++ED +R+ F + G I SV V R D KS +GFV F
Sbjct: 216 TKFNNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSK------CFGFVNFENP 269
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT----GSKILVRNI 693
E +A+ L D+ + + ++ + E E R V +Q G + V+N+
Sbjct: 270 EDAAKAVDALNGKKFDDKEWYVGKAQKKSEREVELKSRFEQTVKEQVDKYQGVNLYVKNL 329
Query: 694 PFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+++ELF +G + K +R P SG+ RG GFV F T EA RA+
Sbjct: 330 DDTIDDEKLKELFSEYGTITSCKVMRDP-----SGISRGSGFVAFSTPEEASRAL 379
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+ + T+ + F + G + SV V R S G+ S+GYG+V + ++
Sbjct: 40 TSLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDL---STGR--SLGYGYVNYSNQQDA 94
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A+ VL + L+ I + S R+ RKS I ++N+
Sbjct: 95 TRAIDVLNFTPLNNKTIRVSVSRRD------PTDRKSG------AGNIFIKNLDKSIDIK 142
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ E F +FG + ++ SG +G+GFV++ ++ A+ A+ L
Sbjct: 143 ALHETFSSFGTIISCKIATD--ASGQSKGYGFVQYDSEEAAQTAIDKL 188
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V+NLS + +EDDL K F +YG + V++ D + K+K F V F PE A +A L
Sbjct: 221 IYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDAD-GKSKCFGFVNFENPEDAAKAVDAL 279
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA---FNQVVEARSKRI----IL 451
+G F + ++ GK ++ SER+++ F Q V+ + + +
Sbjct: 280 NGKKFDDKEWYV--GKAQKK------------SEREVELKSRFEQTVKEQVDKYQGVNLY 325
Query: 452 VKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYT 506
VKNL LK LF +G + +V+ P GI +G V F +A A +
Sbjct: 326 VKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAFSTPEEASRALGEMNGK 385
Query: 507 KFKEVPLYLEWA 518
PLY+ A
Sbjct: 386 MIVSKPLYVALA 397
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 168/417 (40%), Gaps = 79/417 (18%)
Query: 19 DLDEVEFIYKITQEQLKAKFEEKGTVTDVQL-KYTTEGKFRRFAFIGYHREDQAQAALDY 77
DLD+ +T QL F + G V V++ + + G+ + ++ Y + A A+D
Sbjct: 46 DLDQ-----SVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDV 100
Query: 78 FNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKP 137
N T + + I+V D T KS + + N+ D+K H
Sbjct: 101 LNFTPLNNKTIRVSVSRR--DPTDRKS-------GAGNIFIKNLDKSIDIKALHE----- 146
Query: 138 GKKSKNDPTFSDF-------LQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADIS 190
TFS F + SK D EE + D+ N + + D
Sbjct: 147 --------TFSSFGTIISCKIATDASGQSKGYGFVQYDSEEAAQTAIDKLNGMLMN-DKQ 197
Query: 191 DMEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPL 250
+ L+ + +D+ + K +++ I VKNL + DL+ F
Sbjct: 198 VYVGVFLRKQDRDSE-------------MSKTKFNNIYVKNLSDSTSEDDLRKTFGEY-- 242
Query: 251 ASVRTTFLGM----------AYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKY 300
T+ + M ++ F++ ++ KA++ LN K+ D+ Y
Sbjct: 243 -GTITSVVVMRDADGKSKCFGFVNFENPEDAAKAVDA---------LNGKKF--DDKEWY 290
Query: 301 SGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
G A + +E +K++ ++ ++ V D + ++V+NL T+ ++ L +LF +Y
Sbjct: 291 VGKAQKKSEREVE-LKSRFEQTVKEQV----DKYQGVNLYVKNLDDTIDDEKLKELFSEY 345
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
G + + D + ++G V F PE A++A ++G + + + L++ + KE
Sbjct: 346 GTITSCKVMRDP-SGISRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVALAQRKE 401
>gi|302892801|ref|XP_003045282.1| hypothetical protein NECHADRAFT_43518 [Nectria haematococca mpVI
77-13-4]
gi|256726207|gb|EEU39569.1| hypothetical protein NECHADRAFT_43518 [Nectria haematococca mpVI
77-13-4]
Length = 718
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 22/235 (9%)
Query: 535 KEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTE 594
K KN+ + E + + + ED G + + +E R +L++++L ++T
Sbjct: 3 KSKNDRKRPHAEADDLDPASFEDRDNGAVQSTKRARVEERR------SLFVRSLPPSATN 56
Query: 595 DSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDE 654
+++ F + P+ TV + K S GYGFV F + +A K L N D
Sbjct: 57 ETLTDFFSQHYPVKHATVVVDQKTKE-----SRGYGFVTFADADDATEAKKALHNQEWDG 111
Query: 655 HQIELKRSNRNLESEATTVKRKSSNVAK----QTGSKILVRNIPFQAKQSE-VEELFKAF 709
++ ++ + + AT S+N A+ Q K+++RN+P+ K SE + LF++F
Sbjct: 112 RRLRIEIAEPRHRNSATG--EVSANKARKEELQKPPKLIIRNLPWSIKTSEQLSNLFRSF 169
Query: 710 GELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
G++KF LP+ G +GFGF+ K A++A++A+ + GR L ++WA
Sbjct: 170 GKIKFADLPQ---SQGKLKGFGFITIRGKKNAEKALEAI-NGKEIDGRTLAVDWA 220
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 106/231 (45%), Gaps = 19/231 (8%)
Query: 293 SKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
SK++ + ADD + AS E+ +S + + + E +FVR+L + T +
Sbjct: 4 SKNDRKRPHAEADDLDPASFEDRDNGAVQSTKRA-----RVEERRSLFVRSLPPSATNET 58
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
LT F ++ P+ + +D++T +++G+ VTF + AT+A + L + GR L +
Sbjct: 59 LTDFFSQHYPVKHATVVVDQKTKESRGYGFVTFADADDATEAKKALHNQEWDGRRLRIEI 118
Query: 413 GKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTD-LKALFEPF 471
+P+ + + G+V + ++ E + ++++NLP+ ++ L LF F
Sbjct: 119 AEPR-HRNSATGEVSANKARKE--------ELQKPPKLIIRNLPWSIKTSEQLSNLFRSF 169
Query: 472 GDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
G + +P G + K A+ A ++ + L ++WA
Sbjct: 170 GKIKFADLPQSQGKLKGFGFITIRGKKNAEKALEAINGKEIDGRTLAVDWA 220
>gi|353245170|emb|CCA76234.1| related to Nucleolar protein NOP4 [Piriformospora indica DSM 11827]
Length = 850
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 180/458 (39%), Gaps = 89/458 (19%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----------GMAYIGFKDEKNCNKAL 275
T+ + NLP DLK +F + A ++ F+ G+ Y+ F ++ + +
Sbjct: 27 TVFISNLPYTATSTDLKTHFSDI--APIKNAFVVLEKETKVSKGVGYVTFSLREDAEQCV 84
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
K G+ L + + A G +N + +D A D
Sbjct: 85 EKGSVEMNGRMLRV------SWAAAKGEQGENAQPKGQRPSKVVRSPVKDK---AHDATA 135
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP---IDKETDKTKGFALVTFLMPEHAT 392
I + L + L K K + P +D D TK A V F P A
Sbjct: 136 VRTIIITGLPTGIDSKVLWKKVRKQEGAETLEFPFKNVDGSEDPTK--ANVVFTSPTQAL 193
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
A + L+ V+ G +L + K E + N RS R+I V
Sbjct: 194 HAVEKLNAHVYKGSLLGVTLKKRLEKKPN-----------------------RSSRLI-V 229
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG-------------LVEFLQKNQAKAA 499
+NLP+ T +DL+ALF P G + + +P + G V L + A+ A
Sbjct: 230 RNLPWDTTDSDLRALFLPHGAVYSIEIPTDKVDGQHEGRKPKAKGFAFVWMLSRADAEKA 289
Query: 500 FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE----NTAE 555
+ KE PL ++WA ++AK + KEK E + E G EE++ N+A
Sbjct: 290 IEGVNGKSLKERPLAVDWA----LSKAKWEDV---KEKMEVDAEPGHEEEESDEDSNSAL 342
Query: 556 EDNQQGVPEVEENVEEDEERE---------PEPDTTLYIKNLNFNSTEDSIRRHFKKCGP 606
+ G + + EDEE E PE TTL+I+N+ + +TED +R+ + GP
Sbjct: 343 GVHSDGDVSMH-SAHEDEEEEAPTKPELPAPEAGTTLFIRNVPWEATEDEMRQLLRGFGP 401
Query: 607 IASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ V + ++ S G F ++ +E ++ +
Sbjct: 402 LRYVRIVIDQE-----SGRSKGTAFACYWNKEDADKVI 434
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 92/223 (41%), Gaps = 53/223 (23%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK-DPKSPGQF-LSMGYGF 631
E++P + L ++NL +++T+ +R F G + S+ + K D + G+ + G+ F
Sbjct: 218 EKKPNRSSRLIVRNLPWDTTDSDLRALFLPHGAVYSIEIPTDKVDGQHEGRKPKAKGFAF 277
Query: 632 VQFYTRESLNQALKVLQNSSLDEH------------------------------------ 655
V +R +A++ + SL E
Sbjct: 278 VWMLSRADAEKAIEGVNGKSLKERPLAVDWALSKAKWEDVKEKMEVDAEPGHEEEESDED 337
Query: 656 -----------QIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ + ++ + E EA T K A + G+ + +RN+P++A + E+ +
Sbjct: 338 SNSALGVHSDGDVSMHSAHEDEEEEAPT---KPELPAPEAGTTLFIRNVPWEATEDEMRQ 394
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
L + FG L++VR+ SG +G F + K +A + + A
Sbjct: 395 LLRGFGPLRYVRIVIDQ-ESGRSKGTAFACYWNKEDADKVITA 436
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Query: 315 IKAKHWKSQEDSVQFAEDIAE---SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPID 371
+ K + +ED + D+ E +F+ NL YT T DL F P+ + ++
Sbjct: 1 MPGKRKRDEEDVEMTSGDVKEHSHGSTVFISNLPYTATSTDLKTHFSDIAPIKNAFVVLE 60
Query: 372 KETDKTKGFALVTFLMPEHATQAYQHLDGTVFL-GRMLHLIPGKPKENEG-NVDGKVHCC 429
KET +KG VTF + E A Q + G+V + GRML + K +G N K
Sbjct: 61 KETKVSKGVGYVTFSLREDAEQCVEK--GSVEMNGRMLRVSWAAAKGEQGENAQPKGQRP 118
Query: 430 ISERKLDAFNQVVEARSKRIILVKNLP 456
+ ++ +A + R I++ LP
Sbjct: 119 SKVVRSPVKDKAHDATAVRTIIITGLP 145
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH-------RGFGFVEFITK 738
S+++VRN+P+ S++ LF G + + +P V G H +GF FV +++
Sbjct: 225 SRLIVRNLPWDTTDSDLRALFLPHGAVYSIEIPTDKV-DGQHEGRKPKAKGFAFVWMLSR 283
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKR 776
+A++A++ + L R L ++WA ED++++
Sbjct: 284 ADAEKAIEGV-NGKSLKERPLAVDWALSKAKWEDVKEK 320
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 566 EENVE--EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
EE+VE + +E +T++I NL + +T ++ HF PI + V +K+ K
Sbjct: 9 EEDVEMTSGDVKEHSHGSTVFISNLPYTATSTDLKTHFSDIAPIKNAFVVLEKETK---- 64
Query: 624 FLSMGYGFVQFYTRESLNQAL 644
+S G G+V F RE Q +
Sbjct: 65 -VSKGVGYVTFSLREDAEQCV 84
>gi|149244358|ref|XP_001526722.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|158514320|sp|A5DW14.1|PABP_LODEL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|146449116|gb|EDK43372.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 661
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 199/475 (41%), Gaps = 95/475 (20%)
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
++++A+ ++ A + Q +S AE+ S ++V L+ +V E L ++F G +A
Sbjct: 39 ESSDATSSSVPADSAEEQGESSGIAEN---SASLYVGELNPSVNEATLFEIFSPIGQVAS 95
Query: 366 VILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLI-----PGKPKENEG 420
+ + D + K+ G+A V + E +A + L+ T GR ++ P + +G
Sbjct: 96 IRVCRDAVSKKSLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDG 155
Query: 421 NVDGK-VHCCISERKL-DAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
N+ K +H I + L D F+ +I+ VK + TD DLG+
Sbjct: 156 NIFIKNLHPAIDNKALHDTFSAF-----GKILSVK------VATD---------DLGQSK 195
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKN 538
G V + + A+AA S+ G+ +E GK K
Sbjct: 196 C-----FGFVHYETEEAAQAAIESV----------------NGMLLNDREVYVGKHVSKK 234
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIR 598
+ E + EE K N T +Y+KN++ TE
Sbjct: 235 DRESKL--EEMKANY---------------------------TNIYVKNIDLAYTEKEFE 265
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
F G I S+ + + + KS G+GFV F E+ +A++ L + ++ +I
Sbjct: 266 ELFAPFGKITSIYLEKDAEGKS------KGFGFVNFEEHEAAAKAVEELNDKEINGQKIY 319
Query: 659 LKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKF 714
+ R+ + E K+ + ++K G + V+N+ Q ++EE FK FG +
Sbjct: 320 VGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTITS 379
Query: 715 VRLPKKMV-GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
++ MV +G +GFGFV F T EA +A+ + Q + G+ L + A+ D
Sbjct: 380 SKV---MVDDAGKSKGFGFVCFSTPEEATKAITEMNQRM-VNGKPLYVALAQRKD 430
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 165/433 (38%), Gaps = 85/433 (19%)
Query: 60 FAFIGYHREDQAQAALDYFNNTYVFSSRIKVEKCSNLGDTTKPKSWSKYAP------DSS 113
+A++ YH+ + + A++ N T V ++ WS+ P D +
Sbjct: 110 YAYVNYHKLEDGEKAIEELNYTPVEGRPCRI-------------MWSQRDPSARRSGDGN 156
Query: 114 AYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFSDFLQLHGKDVSKLLPLSNKDGEEKE 173
+ + N+ P D K H S GK D Q SK + + EE
Sbjct: 157 IF--IKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQ------SKCFGFVHYETEEAA 208
Query: 174 EENEDESNNQIAHADISDME-YLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNL 232
+ + N + ++D E Y+ KD SK K Y I VKN+
Sbjct: 209 QAAIESVNGML----LNDREVYVGKHVSKKDRE---------SKLEEMKANYTNIYVKNI 255
Query: 233 PAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKDEKNCNKALNKNKSFWK 283
+K+ + F P + + +L G ++ F++ + KA+ +
Sbjct: 256 DLAYTEKEFEELFAPF--GKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEE----LN 309
Query: 284 GKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG-RIFVR 342
K++N K Y G A + + K Q ++V+ + G +FV+
Sbjct: 310 DKEINGQKI-------YVGRAQKKRE------RTEELKKQYEAVRLEKLSKYQGVNLFVK 356
Query: 343 NLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTV 402
NL + + L + F+ +G + + +D + K+KGF V F PE AT+A ++ +
Sbjct: 357 NLDEQIDSEKLEEEFKPFGTITSSKVMVD-DAGKSKGFGFVCFSTPEEATKAITEMNQRM 415
Query: 403 FLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPT 462
G+ L++ + K+ V E+++ A NQ+ R + LP + +P
Sbjct: 416 VNGKPLYVALAQRKD--------VRRSQLEQQIQARNQM---RMQNAAAAGGLPGQFMPP 464
Query: 463 DL---KALFEPFG 472
+ F P G
Sbjct: 465 MFYGQQGFFPPNG 477
>gi|452003351|gb|EMD95808.1| hypothetical protein COCHEDRAFT_1190998 [Cochliobolus
heterostrophus C5]
Length = 756
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 9/186 (4%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L+ VT +DLT+ F + P+ ++ +DKET ++KG+ VTF E A +A + L
Sbjct: 44 LFVRSLAPDVTSEDLTEYFSESYPIKNALVVLDKETRESKGYGFVTFADVEDAQRAKEEL 103
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + + + ++ EG + K K + QV EA+ +II V+NLP+
Sbjct: 104 NNTQIKGKKIKVDFAEARQREG--EEKRPRAADRIKAEREQQVKEAQVPKII-VRNLPWT 160
Query: 459 T-LPTDLKALFEPFGDLGRVLVP--PYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVP 512
P DL+ LF +G + +P P G G V K A+ A L + P
Sbjct: 161 IKTPEDLEKLFRSYGKVNFANLPKKPNGELRGFGFVSLRGKKNAEKAMQELNGKEISGRP 220
Query: 513 LYLEWA 518
+ ++WA
Sbjct: 221 IAVDWA 226
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 17/202 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++++L + T + + +F + PI + V K+ + S GYGFV F E +
Sbjct: 44 LFVRSLAPDVTSEDLTEYFSESYPIKNALVVLDKETRE-----SKGYGFVTFADVEDAQR 98
Query: 643 ALKVLQNSSLDEHQIELKRSN-RNLESE------ATTVK-RKSSNVAKQTGSKILVRNIP 694
A + L N+ + +I++ + R E E A +K + V + KI+VRN+P
Sbjct: 99 AKEELNNTQIKGKKIKVDFAEARQREGEEKRPRAADRIKAEREQQVKEAQVPKIIVRNLP 158
Query: 695 FQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTH 753
+ K E +E+LF+++G++ F LPKK +G RGFGFV K A++AM+ L
Sbjct: 159 WTIKTPEDLEKLFRSYGKVNFANLPKKP--NGELRGFGFVSLRGKKNAEKAMQEL-NGKE 215
Query: 754 LYGRRLVLEWAEEADNVEDIRK 775
+ GR + ++WA + D +++K
Sbjct: 216 ISGRPIAVDWAVDRDTWLNLQK 237
>gi|70994844|ref|XP_752199.1| ribosome biogenesis (Nop4) [Aspergillus fumigatus Af293]
gi|66849833|gb|EAL90161.1| ribosome biogenesis (Nop4), putative [Aspergillus fumigatus Af293]
gi|159124888|gb|EDP50005.1| ribosome biogenesis (Nop4), putative [Aspergillus fumigatus A1163]
Length = 740
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 145/332 (43%), Gaps = 42/332 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT+ F + + I+ D ET KG+ VTF E A A +
Sbjct: 50 LFVRSLPTSATTESLTEYFSQSYVIKHAIVVNDPETKLCKGYGFVTFADLEDAQAALKEF 109
Query: 399 DGTVFLGRMLHLIPGKPKENE--GNVDGKVHCCIS-ERKLDAFNQVVEARSKRIILVKNL 455
+G+VF G+ + + +P+ E N+ V + E K Q + ++I V+NL
Sbjct: 110 NGSVFEGKTIRVDYAQPRHREIDENLGKSVPAPAALELKKQREQQKTSTQPPKLI-VRNL 168
Query: 456 PYRTL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKE 510
P+ P DL F FG + V +P G G V K A+ A ++ +
Sbjct: 169 PWSIKEPEDLAVHFRSFGKVKYVTLPKKGDKLAGFGFVVLRGKKNAEKALQAVNGKEVDG 228
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
L ++WA E E +K K+++ EE G E + DN +GV +++ +
Sbjct: 229 RTLAVDWAVEKEVWENLKKESEKKEDTQEEAGSSDVEMADDAETTSDN-EGVESDDDDED 287
Query: 571 ED--------------------------EEREPEPDT-TLYIKNLNFNSTEDSIRRHFKK 603
ED +E+E E + T++I+NL F+ T++++ HF +
Sbjct: 288 EDMDDDDEEDEEDMDEEEDEDEGNEDERQEKEDERNACTIFIRNLPFSCTDEALYEHFTQ 347
Query: 604 CGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
GP+ + + + P G GFV F+
Sbjct: 348 FGPLRYARIVVDPETERP-----RGTGFVCFW 374
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 120/238 (50%), Gaps = 23/238 (9%)
Query: 556 EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARK 615
+D Q + ++ ++++ +P TL++++L ++T +S+ +F + I V
Sbjct: 23 QDTQTTMDSPRKDTIQNDKVSTQPKRTLFVRSLPTSATTESLTEYFSQSYVIKHAIVV-- 80
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNS-------SLDEHQIELKRSNRNLES 668
DP++ L GYGFV F E ALK S +D Q + + NL
Sbjct: 81 NDPETK---LCKGYGFVTFADLEDAQAALKEFNGSVFEGKTIRVDYAQPRHREIDENLGK 137
Query: 669 EA---TTVKRKSSNVAKQTGS---KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKM 721
++ K ++T + K++VRN+P+ K+ E + F++FG++K+V LPKK
Sbjct: 138 SVPAPAALELKKQREQQKTSTQPPKLIVRNLPWSIKEPEDLAVHFRSFGKVKYVTLPKK- 196
Query: 722 VGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNR 779
G L GFGFV K A++A++A+ + GR L ++WA E + E+++K + +
Sbjct: 197 -GDKLA-GFGFVVLRGKKNAEKALQAV-NGKEVDGRTLAVDWAVEKEVWENLKKESEK 251
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 20/196 (10%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFK-------PLPLASVRTTFL-GMAYIGFKDEKNCNKALN 276
T+ V++LP + L YF + + T G ++ F D ++ AL
Sbjct: 48 RTLFVRSLPTSATTESLTEYFSQSYVIKHAIVVNDPETKLCKGYGFVTFADLEDAQAALK 107
Query: 277 K-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
+ N S ++GK + + D + D+N S+ A K Q + + + +
Sbjct: 108 EFNGSVFEGKTIRV-----DYAQPRHREIDENLGKSVPAPAALELKKQREQQKTS---TQ 159
Query: 336 SGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
++ VRNL +++ E +DL F +G + V LP K+ DK GF V ++A +A
Sbjct: 160 PPKLIVRNLPWSIKEPEDLAVHFRSFGKVKYVTLP--KKGDKLAGFGFVVLRGKKNAEKA 217
Query: 395 YQHLDGTVFLGRMLHL 410
Q ++G GR L +
Sbjct: 218 LQAVNGKEVDGRTLAV 233
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
Q ED + IF+RNL ++ T++ L + F ++GPL + +D ET++ +G V F
Sbjct: 316 QEKEDERNACTIFIRNLPFSCTDEALYEHFTQFGPLRYARIVVDPETERPRGTGFVCFWK 375
Query: 388 PEHA 391
E A
Sbjct: 376 VEDA 379
>gi|356572504|ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 636
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 175/444 (39%), Gaps = 94/444 (21%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A ++V +L V++ L F ++ LA V + D T K+ + + F+ P+ A +
Sbjct: 9 AAPASLYVGDLHPDVSDSHLVDAFSEFKSLASVRVCKDSSTGKSLCYGYLNFVSPQDAIR 68
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + + + G+ + ++ S R DA + + VK
Sbjct: 69 AIELKNNSTLNGKAMRVM------------------WSRRDPDARKSAIGN-----LFVK 105
Query: 454 NLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKF 508
NLP L+ +F+ +G++ +V+ G + G V+F + +K A L
Sbjct: 106 NLPESIDNAGLQDIFKKYGNILSSKVVTSEDGKSKGYGFVQFESEESSKVAIEKLNGYTV 165
Query: 509 KEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN 568
+ LY+ G F
Sbjct: 166 ADKELYV-----GKF--------------------------------------------- 175
Query: 569 VEEDEEREPEPD---TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFL 625
V++ + P PD T LY+KNL+ + +E +++ F G I S+ +A+ + +
Sbjct: 176 VKKSDRILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNNG------M 229
Query: 626 SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV----KRKSSNVA 681
S G+GFV + + +A++ + S L + + R+ + E E +++ +
Sbjct: 230 SKGFGFVNYDNPDDAKKAMEAMNGSQLGSKILYVARAQKKAEREQILHHQFEEKQKEQIL 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
K GS I V+NI E+ + F A G + ++ + G+ +GFGFV F T EA
Sbjct: 290 KYKGSNIYVKNIDDHVSDEELRDHFSACGTITSAKIMRD--DKGISKGFGFVCFSTPEEA 347
Query: 742 KRAMKALCQSTHLYGRRLVLEWAE 765
+A+ +G+ L + A+
Sbjct: 348 NKAVNTF-HGFMYHGKPLYVALAQ 370
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 170/424 (40%), Gaps = 91/424 (21%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V +L + VT+ L LF + G + V + D T ++ G+ V + P A++A
Sbjct: 37 STSLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRAM 96
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ L+ T G+ + ++ H + RK + N I +KNL
Sbjct: 97 EMLNFTPVNGKSIRVM-------------YSHRDPTLRKSGSAN----------IFIKNL 133
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYL 515
D KAL + F G +L K A +S
Sbjct: 134 DKSI---DNKALHDTFSSFGNIL----------------SCKIATDS------------- 161
Query: 516 EWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEER 575
+ K G + NEE + G +K D Q V + +ER
Sbjct: 162 ---------NGQSKGYGFVQYDNEESAQ-GAIDKLNGMLMNDKQVYV----GHFLRKQER 207
Query: 576 EPEPDTT----LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
E T +Y+KNL+ ++T+D +++ F + G I S V R D K S +GF
Sbjct: 208 ESTTGMTKFQNVYVKNLSESTTDDELKKVFGEFGNITSAVVMRDADGK------SKCFGF 261
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGSK 687
+ F T E +A++ L D+ + + K+S R E ++ + V K G
Sbjct: 262 INFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKEAVDKYQGLN 321
Query: 688 ILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ V+N+ +++ELF FG + K +R P SG+ RG GFV F T EA RA
Sbjct: 322 LYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDP-----SGISRGSGFVAFSTSEEASRA 376
Query: 745 MKAL 748
+ +
Sbjct: 377 LSEM 380
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 23/262 (8%)
Query: 265 FKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMEN--IKAKHWKS 322
F + +C A + N + K +Y + SA+ GA D N M + + H+
Sbjct: 149 FGNILSCKIATDSN---GQSKGYGFVQYDNEESAQ--GAIDKLNGMLMNDKQVYVGHFLR 203
Query: 323 QEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFAL 382
+++ + + + ++V+NLS + T+D+L K+F ++G + ++ D + K+K F
Sbjct: 204 KQER-ESTTGMTKFQNVYVKNLSESTTDDELKKVFGEFGNITSAVVMRDAD-GKSKCFGF 261
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK-ENEGNVDGKVHCCISERKLDAFNQV 441
+ F E A +A + L+G F + ++ + K E E + K E
Sbjct: 262 INFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKE--------A 313
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQA 496
V+ + VKNL LK LF FG + +V+ P GI +G V F +A
Sbjct: 314 VDKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEA 373
Query: 497 KAAFNSLAYTKFKEVPLYLEWA 518
A + + PLY+ A
Sbjct: 374 SRALSEMNGKMIVSKPLYVALA 395
>gi|350631988|gb|EHA20356.1| hypothetical protein ASPNIDRAFT_44327 [Aspergillus niger ATCC 1015]
Length = 722
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 145/335 (43%), Gaps = 54/335 (16%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F+R+L + T + LT+ F + + + D ET ++KG+ VTF E A A +
Sbjct: 40 LFIRSLPASTTTESLTEYFSQSYVIKHAVAVTDPETKQSKGYGFVTFADIEDAKAALEEF 99
Query: 399 DGTVFLGRMLHLIPGKPK-----ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+G+VF G+ + + +P+ EN G ++K + Q A+ ++I V+
Sbjct: 100 NGSVFEGKKIKVEYAQPRHRVVDENLGKSKPSAEALEQKKKRE--EQRAAAQPPKLI-VR 156
Query: 454 NLPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKF 508
NLP+ P DL LF FG + V +P G G V K A+ A ++ +
Sbjct: 157 NLPWSIKEPDDLAVLFRSFGKVKYVTLPKKGSQLAGFGFVVLRGKKNAEKALQAVNGKEV 216
Query: 509 KEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN 568
L ++WA EK+ ++ +K++EE EE +E+ E+ ED + ++E
Sbjct: 217 DGRTLAVDWAV--------EKNVWEDLQKDQEEQEENVKEESEDADMEDAIEAEVGIDEE 268
Query: 569 VEEDEEREPEPD----------------------------TTLYIKNLNFNSTEDSIRRH 600
+ DE+ + E +T++I+NL F +D + H
Sbjct: 269 AQSDEDDDMEDGSDVDEDEDVEEDEDEDEEEGDKEDERNASTIFIRNLPFTCDDDMLYEH 328
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
F + GP+ + + + P G GF F+
Sbjct: 329 FTQFGPLRYARIVVDHETERP-----RGTGFACFW 358
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 25/213 (11%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
+P L+I++L ++T +S+ +F + I DP++ S GYGFV F
Sbjct: 35 QPRRELFIRSLPASTTTESLTEYFSQSYVIKHAVAV--TDPETK---QSKGYGFVTFADI 89
Query: 638 ESLNQALKVLQNSSLDEHQIE--------------LKRSNRNLESEATTVKRKSSNVAKQ 683
E AL+ S + +I+ L +S + E+ KR+ A Q
Sbjct: 90 EDAKAALEEFNGSVFEGKKIKVEYAQPRHRVVDENLGKSKPSAEALEQKKKREEQRAAAQ 149
Query: 684 TGSKILVRNIPFQAKQ-SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
K++VRN+P+ K+ ++ LF++FG++K+V LPKK GS L GFGFV K A+
Sbjct: 150 P-PKLIVRNLPWSIKEPDDLAVLFRSFGKVKYVTLPKK--GSQLA-GFGFVVLRGKKNAE 205
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEADNVEDIRK 775
+A++A+ + GR L ++WA E + ED++K
Sbjct: 206 KALQAV-NGKEVDGRTLAVDWAVEKNVWEDLQK 237
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 213 PVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLA--SVRTT------FLGMAYIG 264
P + P + + +++LPA + L YF + +V T G ++
Sbjct: 26 PAQETPASNQPRRELFIRSLPASTTTESLTEYFSQSYVIKHAVAVTDPETKQSKGYGFVT 85
Query: 265 FKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
F D ++ AL + N S ++GK++ + +Y++ D+N S + +A K +
Sbjct: 86 FADIEDAKAALEEFNGSVFEGKKIKV-EYAQPRHR----VVDENLGKSKPSAEALEQKKK 140
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKTKGFAL 382
+ + A A+ ++ VRNL +++ E DDL LF +G + V LP K+ + GF
Sbjct: 141 REEQRAA---AQPPKLIVRNLPWSIKEPDDLAVLFRSFGKVKYVTLP--KKGSQLAGFGF 195
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHL 410
V ++A +A Q ++G GR L +
Sbjct: 196 VVLRGKKNAEKALQAVNGKEVDGRTLAV 223
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 84/212 (39%), Gaps = 46/212 (21%)
Query: 227 IVVKNLPAGVKK-KDLKAYFKP------LPLASVRTTFLGMAYIGFKDEKNCNKALNK-N 278
++V+NLP +K+ DL F+ + L + G ++ + +KN KAL N
Sbjct: 153 LIVRNLPWSIKEPDDLAVLFRSFGKVKYVTLPKKGSQLAGFGFVVLRGKKNAEKALQAVN 212
Query: 279 KSFWKGKQL--------NIYK-YSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
G+ L N+++ KD + +++ +A ME+ E++
Sbjct: 213 GKEVDGRTLAVDWAVEKNVWEDLQKDQEEQEENVKEESEDADMEDAIEAEVGIDEEAQSD 272
Query: 330 AEDIAESGR-----------------------------IFVRNLSYTVTEDDLTKLFEKY 360
+D E G IF+RNL +T +D L + F ++
Sbjct: 273 EDDDMEDGSDVDEDEDVEEDEDEDEEEGDKEDERNASTIFIRNLPFTCDDDMLYEHFTQF 332
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
GPL + +D ET++ +G F P+ A
Sbjct: 333 GPLRYARIVVDHETERPRGTGFACFWKPDDAA 364
>gi|145256511|ref|XP_001401421.1| ribosome biogenesis (Nop4) [Aspergillus niger CBS 513.88]
gi|134058324|emb|CAK38513.1| unnamed protein product [Aspergillus niger]
Length = 722
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 145/335 (43%), Gaps = 54/335 (16%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F+R+L + T + LT+ F + + + D ET ++KG+ VTF E A A +
Sbjct: 40 LFIRSLPASTTTESLTEYFSQSYVIKHAVAVTDPETKQSKGYGFVTFADIEDAKAALEEF 99
Query: 399 DGTVFLGRMLHLIPGKPK-----ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+G+VF G+ + + +P+ EN G ++K + Q A+ ++I V+
Sbjct: 100 NGSVFEGKKIKVEYAQPRHRVVDENLGKSKPSAEALEQKKKRE--EQRAAAQPPKLI-VR 156
Query: 454 NLPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKF 508
NLP+ P DL LF FG + V +P G G V K A+ A ++ +
Sbjct: 157 NLPWSIKEPDDLAVLFRSFGKVKYVTLPKKGSQLAGFGFVVLRGKKNAEKALQAVNGKEV 216
Query: 509 KEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN 568
L ++WA EK+ ++ +K++EE EE +E+ E+ ED + ++E
Sbjct: 217 DGRTLAVDWAV--------EKNVWEDLQKDQEEQEENVKEESEDADMEDAIEAEVGIDEE 268
Query: 569 VEEDEEREPEPD----------------------------TTLYIKNLNFNSTEDSIRRH 600
+ DE+ + E +T++I+NL F +D + H
Sbjct: 269 AQSDEDDDMEDGSDVDEDEDVEEDEDEDEEEGDKEDERNASTIFIRNLPFTCDDDMLYEH 328
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
F + GP+ + + + P G GF F+
Sbjct: 329 FTQFGPLRYARIVVDHETERP-----RGTGFACFW 358
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 25/213 (11%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
+P L+I++L ++T +S+ +F + I DP++ S GYGFV F
Sbjct: 35 QPRRELFIRSLPASTTTESLTEYFSQSYVIKHAVAV--TDPETK---QSKGYGFVTFADI 89
Query: 638 ESLNQALKVLQNSSLDEHQIE--------------LKRSNRNLESEATTVKRKSSNVAKQ 683
E AL+ S + +I+ L +S + E+ KR+ A Q
Sbjct: 90 EDAKAALEEFNGSVFEGKKIKVEYAQPRHRVVDENLGKSKPSAEALEQKKKREEQRAAAQ 149
Query: 684 TGSKILVRNIPFQAKQ-SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
K++VRN+P+ K+ ++ LF++FG++K+V LPKK GS L GFGFV K A+
Sbjct: 150 P-PKLIVRNLPWSIKEPDDLAVLFRSFGKVKYVTLPKK--GSQLA-GFGFVVLRGKKNAE 205
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEADNVEDIRK 775
+A++A+ + GR L ++WA E + ED++K
Sbjct: 206 KALQAV-NGKEVDGRTLAVDWAVEKNVWEDLQK 237
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 213 PVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLA--SVRTT------FLGMAYIG 264
P + P + + +++LPA + L YF + +V T G ++
Sbjct: 26 PAQETPASNQPRRELFIRSLPASTTTESLTEYFSQSYVIKHAVAVTDPETKQSKGYGFVT 85
Query: 265 FKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
F D ++ AL + N S ++GK++ + +Y++ D+N S + +A K +
Sbjct: 86 FADIEDAKAALEEFNGSVFEGKKIKV-EYAQPRHR----VVDENLGKSKPSAEALEQKKK 140
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKTKGFAL 382
+ + A A+ ++ VRNL +++ E DDL LF +G + V LP K+ + GF
Sbjct: 141 REEQRAA---AQPPKLIVRNLPWSIKEPDDLAVLFRSFGKVKYVTLP--KKGSQLAGFGF 195
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHL 410
V ++A +A Q ++G GR L +
Sbjct: 196 VVLRGKKNAEKALQAVNGKEVDGRTLAV 223
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 84/212 (39%), Gaps = 46/212 (21%)
Query: 227 IVVKNLPAGVKK-KDLKAYFKP------LPLASVRTTFLGMAYIGFKDEKNCNKALNK-N 278
++V+NLP +K+ DL F+ + L + G ++ + +KN KAL N
Sbjct: 153 LIVRNLPWSIKEPDDLAVLFRSFGKVKYVTLPKKGSQLAGFGFVVLRGKKNAEKALQAVN 212
Query: 279 KSFWKGKQL--------NIYK-YSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
G+ L N+++ KD + +++ +A ME+ E++
Sbjct: 213 GKEVDGRTLAVDWAVEKNVWEDLQKDQEEQEENVKEESEDADMEDAIEAEVGIDEEAQSD 272
Query: 330 AEDIAESGR-----------------------------IFVRNLSYTVTEDDLTKLFEKY 360
+D E G IF+RNL +T +D L + F ++
Sbjct: 273 EDDDMEDGSDVDEDEDVEEDEDEDEEEGDKEDERNASTIFIRNLPFTCDDDMLYEHFTQF 332
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
GPL + +D ET++ +G F P+ A
Sbjct: 333 GPLRYARIVVDHETERPRGTGFACFWKPDDAA 364
>gi|449305095|gb|EMD01102.1| hypothetical protein BAUCODRAFT_118813 [Baudoinia compniacensis
UAMH 10762]
Length = 809
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 11/210 (5%)
Query: 562 VPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
V + + E E+RE + TL+++ L N+T DS+ F + PI + K
Sbjct: 77 VEAILQTSEAKEKREQQR-RTLFVRALPPNTTTDSLSDLFSESYPIKHAVAVIDSETKQ- 134
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEH--QIELKRSNRNLESEATTVKRKSSN 679
GYGFV F E +A Q L + ++E+ E+ VK K+
Sbjct: 135 ----CRGYGFVTFADAEDAAKAKDEFQGRVLQDRKLRVEIAEPRHRDEAGEGAVKGKAQR 190
Query: 680 VAKQTGSKILVRNIPFQAKQS-EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
+ +K++VRN+P+ K S ++E+LF+++G++K +P+K G GL GFGFV +
Sbjct: 191 EVVRQSTKLIVRNLPWSIKGSHQLEKLFRSYGKIKQAYVPRKGNG-GLVAGFGFVLMRGR 249
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
A++AM+ + + GR L ++WA E D
Sbjct: 250 KNAEKAMEGV-NGMEVDGRTLAVDWAVEKD 278
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 142/349 (40%), Gaps = 60/349 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR L T D L+ LF + P+ + ID ET + +G+ VTF E A +A
Sbjct: 97 LFVRALPPNTTTDSLSDLFSESYPIKHAVAVIDSETKQCRGYGFVTFADAEDAAKAKDEF 156
Query: 399 DGTVFLGRMLHLIPGKPKE----NEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKN 454
G V R L + +P+ EG V GK A +VV +K ++V+N
Sbjct: 157 QGRVLQDRKLRVEIAEPRHRDEAGEGAVKGK-----------AQREVVRQSTK--LIVRN 203
Query: 455 LPYRTLPT-DLKALFEPFGDLGRVLVPPYGITGLVE---FLQKNQAKAAFNSLAYTKFKE 510
LP+ + L+ LF +G + + VP G GLV F+ K A ++ E
Sbjct: 204 LPWSIKGSHQLEKLFRSYGKIKQAYVPRKGNGGLVAGFGFVLMRGRKNAEKAMEGVNGME 263
Query: 511 V---PLYLEWAPE-GVFAEAKEKSK-----------GKEKEKNEEEGEEGEEEKKENTAE 555
V L ++WA E V+ ++ + G+ EE +G+EE + +
Sbjct: 264 VDGRTLAVDWAVEKDVYQGLQQGEEGGGAEGEMDEDGEADVSGEERDADGDEEDEHDVRN 323
Query: 556 EDNQQGVPEVEEN-------------------VEEDEEREPEPDTTLYIKNLNFNSTEDS 596
ED + E+E+ V+ + + +TL+++NL F T++
Sbjct: 324 EDGVKDDGEIEDEDEDEDDVDIKLDDDDLNDAVKRSQNFSEDKSSTLFVRNLPFICTDED 383
Query: 597 IRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK 645
+ HF + G + V G S G FV FY + L+
Sbjct: 384 LEDHFTRFGAVRYARVV-----MDAGTERSKGTAFVCFYNTSDADACLR 427
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 326 SVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF 385
S F+ED +S +FVRNL + T++DL F ++G + + +D T+++KG A V F
Sbjct: 359 SQNFSED--KSSTLFVRNLPFICTDEDLEDHFTRFGAVRYARVVMDAGTERSKGTAFVCF 416
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
E P+ L+I NL++N E+ + R F++ G +A V + +D S G+G+V+
Sbjct: 233 ESNPDAVANLFIGNLSWNVDEEWLTREFEEFGELAGVRIITDRD-----SGRSKGFGYVE 287
Query: 634 FYTRESLNQALKVLQNSSLDEHQIEL------KRSNRNLESEATTVKRKSSNVAKQTGSK 687
F E +AL+ S LD I + +SN + + ++K + + +
Sbjct: 288 FTNAEDAAKALEAKNESLLDNRNIRVDFSTPRDKSNAGPQQRSNDRQQKFGDAPGEPTAT 347
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I N+ F A + V E F G + +RLP +G +GFG+VE + EA+ A A
Sbjct: 348 IWCGNLSFDATEDVVREYFAEHGNVNSIRLPTDR-DTGAPKGFGYVEMGSVEEAQAAFNA 406
Query: 748 LCQSTHLYGRRLVLEWAE 765
L Q + GR + L++A+
Sbjct: 407 L-QGQDVGGRPVRLDYAQ 423
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F+ NLS+ V E+ LT+ FE++G LA V + D+++ ++KGF V F E A +A +
Sbjct: 242 LFIGNLSWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFTNAEDAAKALEAK 301
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSK--RIILVKNLP 456
+ ++ R + + P++ K + +R D + +A + I NL
Sbjct: 302 NESLLDNRNIRVDFSTPRD-------KSNAGPQQRSNDRQQKFGDAPGEPTATIWCGNLS 354
Query: 457 YRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAYTKFK 509
+ ++ F G++ + +P P G G VE +A+AAFN+L
Sbjct: 355 FDATEDVVREYFAEHGNVNSIRLPTDRDTGAPKGF-GYVEMGSVEEAQAAFNALQGQDVG 413
Query: 510 EVPLYLEWA 518
P+ L++A
Sbjct: 414 GRPVRLDYA 422
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 259 GMAYIGFKDEKNCNKALN-KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G Y+ F + ++ KAL KN+S + + + +S D +N +
Sbjct: 282 GFGYVEFTNAEDAAKALEAKNESLLDNRNIRV---------DFSTPRDKSNAGPQQ---- 328
Query: 318 KHWKSQEDSVQFAEDIAE-SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
+S + +F + E + I+ NLS+ TED + + F ++G + + LP D++T
Sbjct: 329 ---RSNDRQQKFGDAPGEPTATIWCGNLSFDATEDVVREYFAEHGNVNSIRLPTDRDTGA 385
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
KGF V E A A+ L G GR + L +P+
Sbjct: 386 PKGFGYVEMGSVEEAQAAFNALQGQDVGGRPVRLDYAQPR 425
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
E E ++++ L++N D + + F +CG + S AR + ++ G+ S G+G+V+F
Sbjct: 292 EEEGTKSIFVGRLSWNVDNDWLAQEFAECGEVIS---ARVQMDRNTGK--SRGFGYVEFA 346
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK-RKSSNVAKQTGSKILVRNIP 694
T E++ AL +L +D + + +S + + A + K + A + + + V N+
Sbjct: 347 TTEAVEAAL-LLNGKEIDGRPVNIDKSEQKDKGAAREKRAEKFGDSASEPSAVLFVGNLS 405
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
+ + +V E+F G++K VRLP +G +GFG+VEF AK+A + L T +
Sbjct: 406 WDCTEDQVWEVFGEHGDVKSVRLPTDRE-TGRPKGFGYVEFTDIETAKKAFEGLS-GTEV 463
Query: 755 YGRRLVLEWAEEADN 769
GR + L++++ DN
Sbjct: 464 AGRPIRLDYSQPRDN 478
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 328 QFAEDIAE-SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
+F + +E S +FV NLS+ TED + ++F ++G + V LP D+ET + KGF V F
Sbjct: 387 KFGDSASEPSAVLFVGNLSWDCTEDQVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVEFT 446
Query: 387 MPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
E A +A++ L GT GR + L +P++N
Sbjct: 447 DIETAKKAFEGLSGTEVAGRPIRLDYSQPRDN 478
>gi|359322009|ref|XP_850457.3| PREDICTED: uncharacterized protein LOC483825 [Canis lupus
familiaris]
Length = 1009
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 163/418 (38%), Gaps = 91/418 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTED L + F GP+ + + D T ++ G+A V FL A +A +
Sbjct: 150 LYVGDLDAEVTEDALFRKFSAAGPVLSIRICRDLLTRRSLGYAYVNFLRLADAQRALDTM 209
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ V GR L L+ + + ++ RK N + +KNL
Sbjct: 210 NFDVLRGRPLRLMW---SQRDAHL----------RKSGVGN----------VFIKNL--- 243
Query: 459 TLPTDLKALFEPFGDLGRVLVPPY-----GITG--LVEFLQKNQAKAAFNSLAYTKFKEV 511
D KALFE F G++L G G V F +++ A A + + +
Sbjct: 244 DRSVDDKALFERFSAFGKILSSKVVSDERGSRGYAFVHFQEQSAADRAIEHMNGAQLRGC 303
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
L++ G F + + +E E GE
Sbjct: 304 RLFV-----GRF----QSRQAREAELRSRAGE---------------------------- 326
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
T LYIKN + +R F + G SV V +S G+GF
Sbjct: 327 --------FTNLYIKNFGGRMDDARLRAVFSEYGKTLSVKVMTDASGRS------RGFGF 372
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK----RKSSNVAKQTGSK 687
V F + E+ +A++ L +D + + R+ R E +A + R+ + + G+K
Sbjct: 373 VSFESHEAARRAVEALNGRQVDGQPLFVGRAQRKAERQAELRRAFEQRQQDGLRRAQGAK 432
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ V+N+ + + F FG + V++ M G +GFG + F + +EA RA+
Sbjct: 433 LYVKNLDDAVDEDRLRREFSGFGAVSRVKI---MREEGRSKGFGLICFSSADEAARAL 487
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L+ TED++ R F GP+ S+ + R + S+GY +V F
Sbjct: 148 ASLYVGDLDAEVTEDALFRKFSAAGPVLSIRICRDLLTRR-----SLGYAYVNFLRLADA 202
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL + L + L S R+ +++ K + ++N+
Sbjct: 203 QRALDTMNFDVLRGRPLRLMWSQRD------------AHLRKSGVGNVFIKNLDRSVDDK 250
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
+ E F AFG++ ++ GS RG+ FV F ++ A RA++ + L G RL
Sbjct: 251 ALFERFSAFGKILSSKVVSDERGS---RGYAFVHFQEQSAADRAIEHM-NGAQLRGCRLF 306
Query: 761 L 761
+
Sbjct: 307 V 307
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 88/438 (20%), Positives = 154/438 (35%), Gaps = 110/438 (25%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG AY+ F + +AL+ N +G+ L + +D + SG
Sbjct: 189 LGYAYVNFLRLADAQRALDTMNFDVLRGRPLRLMWSQRDAHLRKSGV------------- 235
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
G +F++NL +V + L + F +G + + D+
Sbjct: 236 --------------------GNVFIKNLDRSVDDKALFERFSAFGKILSSKVVSDERG-- 273
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
++G+A V F A +A +H++G G L G+ + +
Sbjct: 274 SRGYAFVHFQEQSAADRAIEHMNGAQLRG--CRLFVGRFQSRQA---------------- 315
Query: 437 AFNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GL 487
+ E RS+ + +KN R L+A+F +G +V+ G + G
Sbjct: 316 ---REAELRSRAGEFTNLYIKNFGGRMDDARLRAVFSEYGKTLSVKVMTDASGRSRGFGF 372
Query: 488 VEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEE 547
V F A+ A +L + PL++ G+ + K E + E
Sbjct: 373 VSFESHEAARRAVEALNGRQVDGQPLFV----------------GRAQRKAERQAE---- 412
Query: 548 EKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPI 607
E+ Q G+ + LY+KNL+ ED +RR F G +
Sbjct: 413 --LRRAFEQRQQDGLRRAQ-------------GAKLYVKNLDDAVDEDRLRREFSGFGAV 457
Query: 608 ASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEH--QIELKRSNRN 665
+ V + R++ S G+G + F + + +AL + L I L +S R
Sbjct: 458 SRVKIMREEG-------RSKGFGLICFSSADEAARALAEMNGRVLGSKPLSIALAQSRRC 510
Query: 666 LESEATTVKRKSSNVAKQ 683
L+ S A Q
Sbjct: 511 LQPRGLAAAGPCSRGALQ 528
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + + ++ F G I S V D + S GY FV F + + ++
Sbjct: 238 VFIKNLDRSVDDKALFERFSAFGKILSSKVV--SDERG-----SRGYAFVHFQEQSAADR 290
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + + L ++ + R EA R + + ++N + + +
Sbjct: 291 AIEHMNGAQLRGCRLFVGRFQSRQAREAELRSRAGEF------TNLYIKNFGGRMDDARL 344
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+F +G+ V++ SG RGFGFV F + A+RA++AL
Sbjct: 345 RAVFSEYGKTLSVKVMTD--ASGRSRGFGFVSFESHEAARRAVEAL 388
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 171/423 (40%), Gaps = 94/423 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +V + L +F + G + V + D T + G+A V F P A +A + L
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 103
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + ++ N D S RK A N I +KNL
Sbjct: 104 NFTPVNGKPIRIM-------YSNRD------PSSRKSGAAN----------IFIKNLDKS 140
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL++ F G +L G V++ Q A+ A N L +
Sbjct: 141 I---DNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLND 197
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G F +E+ +N G P+
Sbjct: 198 KKVYV-----GPFVRKQER---------------------------ENVFGSPKF----- 220
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
+Y+KNL+ ++TED+++ F GPI SV V R D K S +G
Sbjct: 221 ----------NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK------SRCFG 264
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGS 686
FV F + A++ L D+ ++ + K+S R ++ + + K + G+
Sbjct: 265 FVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGT 324
Query: 687 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ ++N+ E ++ELF FG + ++ + +G+++G GFV F + +A RA+
Sbjct: 325 NLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD--SNGVNKGSGFVAFKSSEDATRAL 382
Query: 746 KAL 748
A+
Sbjct: 383 VAM 385
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 11/193 (5%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP L+I NL++N E+ +R F++ G +A V + +D S G+G+V+F
Sbjct: 226 EPTEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRD-----SGRSKGFGYVEFT 280
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSN-RNLESEATTVKRKSSNVAKQTGSK---ILVR 691
E +A +++ LD ++ + +N R+ + + ++ N Q + + +
Sbjct: 281 NAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFGDQKSPESDTLFIG 340
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
NI F A +S + E F +G + VRLP SG +GFG+V+F + +EA+ A ++L S
Sbjct: 341 NIAFSADESMISETFAEYGSILGVRLPTDPE-SGRPKGFGYVQFSSIDEARSAFESLNGS 399
Query: 752 THLYGRRLVLEWA 764
L GR + L+++
Sbjct: 400 -ELAGRAMRLDFS 411
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 216 KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLP-LASVRTTF-------LGMAYIGFKD 267
K V + + + NL V ++ L++ F+ LA VR G Y+ F +
Sbjct: 222 KTRVEPTEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTN 281
Query: 268 EKNCNKA-LNKNKSFWKGKQLNI-YKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQED 325
++ KA K + G++LN+ + ++ N+A A +A+++ Q+
Sbjct: 282 AEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDRA----------QSRAQNFGDQKS 331
Query: 326 SVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF 385
ES +F+ N++++ E +++ F +YG + V LP D E+ + KGF V F
Sbjct: 332 --------PESDTLFIGNIAFSADESMISETFAEYGSILGVRLPTDPESGRPKGFGYVQF 383
Query: 386 LMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
+ A A++ L+G+ GR + L P++N
Sbjct: 384 SSIDEARSAFESLNGSELAGRAMRLDFSTPRQN 416
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 181/459 (39%), Gaps = 86/459 (18%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V +L + V+E L ++F + GP+ + + D T ++ G+A V + + AT+A
Sbjct: 23 STSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDATRAL 82
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ L+ T G+ + ++ H S RK A N I +KNL
Sbjct: 83 ELLNFTPVNGKPIRIM-------------FSHRDPSLRKSGAAN----------IFIKNL 119
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYL 515
D KAL + F G +L K A +S
Sbjct: 120 ---DKAIDNKALHDTFSAFGGIL----------------SCKVATDS------------- 147
Query: 516 EWAPEGVFAEAKEKSKGKEKEKNE-EEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEE 574
+SKG + E EE + EK D Q V E D
Sbjct: 148 -----------SGQSKGYGFVQFEKEESAQSAIEKVNGMLLNDKQVFVGPFVRRQERDLS 196
Query: 575 REPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQF 634
+Y+KNL N+T+D +++ F GPI+S V R + K S +GFV F
Sbjct: 197 GGVSKFNNVYVKNLGENTTDDELKKVFGAYGPISSAVVMRDNEGK------SKCFGFVNF 250
Query: 635 YTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILV 690
+ +A++ L DE + + R+ + E EA + + S + K G + +
Sbjct: 251 ELADDAAKAVEALNGKKQDEKEWYVGRAQKKSEREAELRAKFEQERKSRIEKYQGVNLYL 310
Query: 691 RNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQ 750
+N+ ++ ELF +G + ++ K G RG GFV F T EA RA+ +
Sbjct: 311 KNLDDAVDDEKLRELFAEYGTITSCKVMKD--PQGQSRGSGFVAFSTPEEATRAVTEM-- 366
Query: 751 STHLYGRRLVLEWAEEADNVEDIRKRTNRYFG---TAVG 786
+T + G + + + A E+ R R F T VG
Sbjct: 367 NTKMVGSKPL--YVALAQRKEERRVRLQAAFAQMRTPVG 403
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 106/273 (38%), Gaps = 57/273 (20%)
Query: 259 GMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G ++ F+ E++ A+ K N KQ+ + + + SG NN
Sbjct: 153 GYGFVQFEKEESAQSAIEKVNGMLLNDKQVFVGPFVRRQERDLSGGVSKFNN-------- 204
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
++V+NL T+D+L K+F YGP++ ++ D E K+
Sbjct: 205 ---------------------VYVKNLGENTTDDELKKVFGAYGPISSAVVMRDNE-GKS 242
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
K F V F + + A +A + L+G K E E V G+ SER+ +
Sbjct: 243 KCFGFVNFELADDAAKAVEALNGK------------KQDEKEWYV-GRAQKK-SEREAEL 288
Query: 438 FNQVVEARSKRI-------ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---T 485
+ + R RI + +KNL L+ LF +G + +V+ P G +
Sbjct: 289 RAKFEQERKSRIEKYQGVNLYLKNLDDAVDDEKLRELFAEYGTITSCKVMKDPQGQSRGS 348
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
G V F +A A + PLY+ A
Sbjct: 349 GFVAFSTPEEATRAVTEMNTKMVGSKPLYVALA 381
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 173/423 (40%), Gaps = 94/423 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +V + L +F + G + V + D T + G+A V F P A +A + L
Sbjct: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + ++ N D S RK A N I +KNL
Sbjct: 101 NFTPINGKPIRIM-------YSNRDP------SSRKSGAAN----------IFIKNLDKS 137
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL++ F G +L G V+F + A+ A + L +
Sbjct: 138 I---DNKALYDTFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLND 194
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G F +E+ +N G P+
Sbjct: 195 KKVYV-----GPFVRKQER---------------------------ENVSGNPKF----- 217
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
+Y+KNL+ ++TED+++ F K GPI SV V R+ D K S +G
Sbjct: 218 ----------NNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGK------SRCFG 261
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA----KQTGS 686
FV F + +A++ L D+ + + R+ + E E ++ N+ K G+
Sbjct: 262 FVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGT 321
Query: 687 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ ++N+ E ++E+F FG + ++ + + +G+ +G GFV F + +A RA+
Sbjct: 322 NLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDL--NGVSKGSGFVAFKSAEDASRAL 379
Query: 746 KAL 748
A+
Sbjct: 380 VAM 382
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 171/463 (36%), Gaps = 109/463 (23%)
Query: 223 QYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------FLGMAYIGFKDEKNCNKA 274
Q ++ V +L V+ L F + + SVR LG AY+ F + +A
Sbjct: 37 QATSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARA 96
Query: 275 LNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI 333
L N + GK + I ++D S++ SGAA+
Sbjct: 97 LEMLNFTPINGKPIRIMYSNRDPSSRKSGAAN---------------------------- 128
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
IF++NL ++ L F +G + + + + ++KG+ V F + E A
Sbjct: 129 -----IFIKNLDKSIDNKALYDTFSVFGNILSCKVATEM-SGESKGYGFVQFELEEAAQN 182
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A L+G + + +++ P K+ NV G FN V VK
Sbjct: 183 AISKLNGMLLNDKKVYVGPFVRKQERENVSGNPK----------FNNV---------YVK 223
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYG-----ITGLVEFLQKNQAKAAFNSLAYTKF 508
NL T +LK +F FG + V+V G G V F + A A L KF
Sbjct: 224 NLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKF 283
Query: 509 KEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN 568
+ Y+ A ++K+E E E E+ +K D QG
Sbjct: 284 DDKEWYVCRA----------------QKKSEREMELKEKFEKNIKEAADKNQG------- 320
Query: 569 VEEDEEREPEPDTTLYIKNLNFNSTEDS-IRRHFKKCGPIASVTVARKKDPKSPGQFLSM 627
T LY+KNL+ + +D ++ F G I S V R + +S
Sbjct: 321 ------------TNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNG------VSK 362
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
G GFV F + E ++AL + + + + + R E A
Sbjct: 363 GSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRKEERRA 405
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+ + + + F + G + SV V R + + LS+GY +V F +
Sbjct: 39 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTR-----LSLGYAYVNFSSPADA 93
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL++L + ++ I + SNR+ S RKS + I ++N+
Sbjct: 94 ARALEMLNFTPINGKPIRIMYSNRDPSS------RKSG------AANIFIKNLDKSIDNK 141
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F FG + ++ +M SG +G+GFV+F + A+ A+ L
Sbjct: 142 ALYDTFSVFGNILSCKVATEM--SGESKGYGFVQFELEEAAQNAISKL 187
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 102/189 (53%), Gaps = 9/189 (4%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T+++ L++N D + F +CG + S AR + ++ G+ S G+GFV F + E+++
Sbjct: 310 TIFVGKLSWNVDNDWLESEFAECGEVVS---ARVQMDRNTGK--SRGFGFVTFASPEAVD 364
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-VRNIPFQAKQS 700
+AL+ L +D I + +S +++ + K+ A S +L V N+ F A +
Sbjct: 365 KALE-LNGKEIDGRPINIDKSVEKDQNQVRERRAKAFGDATSAPSSVLFVGNLSFDATED 423
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
++ E+F +G +K VR+P SG +GFG+VEF AK+A + L + GR +
Sbjct: 424 QLWEVFSDYGSVKSVRMPTDRE-SGRPKGFGYVEFEDVESAKKAHEGLA-GQEIAGRAVR 481
Query: 761 LEWAEEADN 769
L++++ D+
Sbjct: 482 LDFSQPRDD 490
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F + +KAL N G+ +NI K + D N ++ +
Sbjct: 351 GFGFVTFASPEAVDKALELNGKEIDGRPINIDKSVEK----------DQNQ-----VRER 395
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK 378
K+ D+ A S +FV NLS+ TED L ++F YG + V +P D+E+ + K
Sbjct: 396 RAKAFGDATS-----APSSVLFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPK 450
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
GF V F E A +A++ L G GR + L +P+++
Sbjct: 451 GFGYVEFEDVESAKKAHEGLAGQEIAGRAVRLDFSQPRDD 490
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P + L++ NL+F++TED + F G + SV + ++ P G+G+V+F E
Sbjct: 407 PSSVLFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRP-----KGFGYVEFEDVE 461
Query: 639 SLNQALKVLQNSSLDEHQIEL 659
S +A + L + + L
Sbjct: 462 SAKKAHEGLAGQEIAGRAVRL 482
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 171/423 (40%), Gaps = 94/423 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +V + L +F + G + V + D T + G+A V F P A +A + L
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 103
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + ++ N D S RK A N I +KNL
Sbjct: 104 NFTPVNGKPIRIM-------YSNRD------PSSRKSGAAN----------IFIKNLDKS 140
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL++ F G +L G V++ Q A+ A N L +
Sbjct: 141 I---DNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLND 197
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G F +E+ +N G P+
Sbjct: 198 KKVYV-----GPFVRKQER---------------------------ENVFGSPKF----- 220
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
+Y+KNL+ ++TED+++ F GPI SV V R D K S +G
Sbjct: 221 ----------NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK------SRCFG 264
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGS 686
FV F + A++ L D+ ++ + K+S R ++ + + K + G+
Sbjct: 265 FVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGT 324
Query: 687 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ ++N+ E ++ELF FG + ++ + +G+++G GFV F + +A RA+
Sbjct: 325 NLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD--SNGVNKGSGFVAFKSSEDATRAL 382
Query: 746 KAL 748
A+
Sbjct: 383 VAM 385
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 19/167 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+LY+ +L+ + + + F + G + SV V R + + +S+GY +V F +
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTR-----MSLGYAYVNFSSPADAA 97
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE 701
+AL++L + ++ I + SNR+ S RKS + I ++N+
Sbjct: 98 RALEMLNFTPVNGKPIRIMYSNRDPSS------RKSG------AANIFIKNLDKSIDNKA 145
Query: 702 VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ +M SG +G+GFV++ A+ A+ L
Sbjct: 146 LYDTFSAFGNILSCKVATEM--SGESKGYGFVQYEQDESAQNAINEL 190
>gi|356505295|ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 632
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 175/444 (39%), Gaps = 94/444 (21%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A ++V +L V+++ L F + LA V + D T K+ + V F+ P+ A +
Sbjct: 9 AAPASLYVGDLHPNVSDNHLVDAFSDFESLASVRVCKDSSTGKSLCYGYVNFVSPQDAIR 68
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A + + + G+ + ++ S R DA + + VK
Sbjct: 69 AIELKNNSTLNGKAMRVM------------------WSRRDPDARKNAIGN-----LFVK 105
Query: 454 NLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKF 508
NLP L+ +F+ +G++ +V++ G + G V+F + + A L +
Sbjct: 106 NLPESIDNAGLQDMFKKYGNILSSKVVMSEDGKSKGYGFVQFESEESSNVAIEKLNGSTV 165
Query: 509 KEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN 568
+ LY+ G F
Sbjct: 166 GDKQLYV-----GKF--------------------------------------------- 175
Query: 569 VEEDEEREPEPD---TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFL 625
V++ + P PD T LY+KNL+ + +E +++ F G I S+ +A+ +
Sbjct: 176 VKKSDRILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNIG------M 229
Query: 626 SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV----KRKSSNVA 681
S G+GFV + + +A++ + S L + + R+ + E E +++ +
Sbjct: 230 SKGFGFVNYDNPDDAKRAMEAMNGSKLGSKILYVARAQKKAEREQILHHQFEEKRKEQIL 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
K GS I V+NI E+ + F A G + ++ + G+ +GFGFV F T EA
Sbjct: 290 KYKGSNIYVKNIDDHVSDEELRDHFSACGIITSAKIMRD--DKGISKGFGFVCFSTPEEA 347
Query: 742 KRAMKALCQSTHLYGRRLVLEWAE 765
+A+ +G+ L + A+
Sbjct: 348 NKAVNTF-HGFMFHGKPLYVALAQ 370
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 11/190 (5%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
++++ L++N D + + F +CG + S TV + S G+ S G+G+V F T E++
Sbjct: 334 SIFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDR---STGR--SRGFGYVHFSTSEAVE 388
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSS--NVAKQTGSKILVRNIPFQAKQ 699
+A++ L +D + + +SN +A+ KR + + + + V N+ F
Sbjct: 389 KAIE-LNGKEIDGRAVNVDKSN-PPNKDASREKRAKTFGDTTSPPSATLFVGNLSFGMND 446
Query: 700 SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
+ E F GE+K VRLP SG +GFG+VEF AK+A A+ Q L GR +
Sbjct: 447 DALWEAFSEHGEVKNVRLPTDRE-SGRPKGFGYVEFSDVETAKKAHAAM-QGVELDGRSV 504
Query: 760 VLEWAEEADN 769
L++++ D+
Sbjct: 505 RLDFSQPRDD 514
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G Y+ F + KA+ N G+ +N+ K + N +AS E K
Sbjct: 375 GFGYVHFSTSEAVEKAIELNGKEIDGRAVNVDKSNPPN-----------KDASRE----K 419
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK 378
K+ D+ S +FV NLS+ + +D L + F ++G + V LP D+E+ + K
Sbjct: 420 RAKTFGDTTS-----PPSATLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPK 474
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
GF V F E A +A+ + G GR + L +P+++
Sbjct: 475 GFGYVEFSDVETAKKAHAAMQGVELDGRSVRLDFSQPRDD 514
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P TL++ NL+F +D++ F + G + +V + ++ P G+G+V+F E
Sbjct: 431 PSATLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRP-----KGFGYVEFSDVE 485
Query: 639 SLNQALKVLQNSSLDEHQIEL 659
+ +A +Q LD + L
Sbjct: 486 TAKKAHAAMQGVELDGRSVRL 506
>gi|387219557|gb|AFJ69487.1| putative rna-binding protein 19, partial [Nannochloropsis gaditana
CCMP526]
Length = 136
Score = 79.3 bits (194), Expect = 7e-12, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 293 SKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
++D+ A +GAA + KA SQE S + A D+ +GR+F+RNL ++ T +D
Sbjct: 16 ARDSRAIEAGAAGEEREDGGAR-KASVPSSQELS-RPAPDVGVTGRLFLRNLPFSATTED 73
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L +L +GP+A++ LP+D + + KGFA +FL+PE A +A + LD F GR+LH++
Sbjct: 74 LEELLRPFGPVADMHLPLD-DAHRPKGFAFASFLIPEDAVRAMEALDRRTFQGRLLHVLA 132
Query: 413 GK 414
+
Sbjct: 133 AQ 134
Score = 48.1 bits (113), Expect = 0.019, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
++ +RN+PF A ++EEL + FG + + LP + + +GF F F+ +A RAM+
Sbjct: 59 RLFLRNLPFSATTEDLEELLRPFGPVADMHLP--LDDAHRPKGFAFASFLIPEDAVRAME 116
Query: 747 ALCQSTHLYGRRLVLEWAEEA 767
AL + T GR L + A+EA
Sbjct: 117 ALDRRT-FQGRLLHVLAAQEA 136
>gi|308806325|ref|XP_003080474.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
gi|116058934|emb|CAL54641.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
Length = 504
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 162/422 (38%), Gaps = 94/422 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +VTE L + F GP+ + + D T ++ G+A V F A A L
Sbjct: 34 LYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSSSDAAHAIDVL 93
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ +I GKP + S+R + V I +KNL
Sbjct: 94 N--------FQVINGKP----------IRVLYSQR-----DPAVRRSGVGNIFIKNL--- 127
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL + F G + + G V+F A+AA +++ + +
Sbjct: 128 DKAIDNKALLDTFAQFGTITSAKVAMDSAGNSKGYGFVQFETAEAAQAAIDNVNGMELND 187
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G F ++S E + N
Sbjct: 188 KQVYV-----GPFQRRADRSTQGEAKFN-------------------------------- 210
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
+Y+KNL+ N +++ +R F + G + S + + ++ KS G+G
Sbjct: 211 -----------NVYVKNLSENLSDEKLREKFAEHGAVTSCVIMKDEEGKSK------GFG 253
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGS 686
FV F + E A++ L + DE + R+ + E EA + + + K G+
Sbjct: 254 FVCFESPEGAASAVENLDGYTEDEKTWVVCRAQKKAEREAELKAKFEAERRERMEKMAGA 313
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+ ++N+ ++ ELF FG + R+ + SG RG FV F + +EA RA+
Sbjct: 314 NLYIKNLEEGTDDEKLRELFNEFGTITSCRVMRD--ASGASRGSAFVAFSSPDEATRAVT 371
Query: 747 AL 748
+
Sbjct: 372 EM 373
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
++LY+ +L + TE + F GP+ S+ V R + S+GY +V F +
Sbjct: 32 SSLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRR-----SLGYAYVNFQSSSDA 86
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
A+ VL ++ I + S R+ V+R I ++N+
Sbjct: 87 AHAIDVLNFQVINGKPIRVLYSQRD-----PAVRRSGVG-------NIFIKNLDKAIDNK 134
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ + F FG + ++ M +G +G+GFV+F T A+ A+
Sbjct: 135 ALLDTFAQFGTITSAKV--AMDSAGNSKGYGFVQFETAEAAQAAI 177
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 15/186 (8%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NLS ++++ L + F ++G + ++ D+E K+KGF V F PE A A ++L
Sbjct: 212 VYVKNLSENLSDEKLREKFAEHGAVTSCVIMKDEE-GKSKGFGFVCFESPEGAASAVENL 270
Query: 399 DGTVFLGRMLHLIPGKPK-ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
DG + + + K E E + K +ER+ + +E + + +KNL
Sbjct: 271 DGYTEDEKTWVVCRAQKKAEREAELKAKFE---AERR-----ERMEKMAGANLYIKNLEE 322
Query: 458 RTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTKFKEVP 512
T L+ LF FG + RV+ G + V F ++A A + P
Sbjct: 323 GTDDEKLRELFNEFGTITSCRVMRDASGASRGSAFVAFSSPDEATRAVTEMNGKMVGAKP 382
Query: 513 LYLEWA 518
LY+ A
Sbjct: 383 LYVALA 388
>gi|429961636|gb|ELA41181.1| hypothetical protein VICG_01780 [Vittaforma corneae ATCC 50505]
Length = 263
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
KQT +KI+V+N+PFQA Q E++ +F +F + VRLPKK G HRGF F+ +
Sbjct: 182 KQT-NKIIVKNVPFQATQDELKSIFSSFTHVLDVRLPKK--SDGTHRGFAFIVLDSPRHV 238
Query: 742 KRAMKALCQSTHLYGRRLVLEWAE 765
A++ STHLYGRRLVLE A+
Sbjct: 239 DDAIEYFSSSTHLYGRRLVLEKAK 262
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQ 393
++ +I V+N+ + T+D+L +F + + +V LP K++D T +GFA + P H
Sbjct: 183 QTNKIIVKNVPFQATQDELKSIFSSFTHVLDVRLP--KKSDGTHRGFAFIVLDSPRHVDD 240
Query: 394 AYQHLDGTVFL-GRMLHL 410
A ++ + L GR L L
Sbjct: 241 AIEYFSSSTHLYGRRLVL 258
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYF-NNTYVFS 85
++ TQ++LK+ F V DV+L ++G R FAFI A++YF ++T+++
Sbjct: 194 FQATQDELKSIFSSFTHVLDVRLPKKSDGTHRGFAFIVLDSPRHVDDAIEYFSSSTHLYG 253
Query: 86 SRIKVEK 92
R+ +EK
Sbjct: 254 RRLVLEK 260
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 176/433 (40%), Gaps = 97/433 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L V E L +LF + GP+ + + D ET+++ G+A V F+ P+ A A +HL
Sbjct: 8 LYVGDLERNVDEAQLFQLFARVGPIFSIRVCRD-ETNRSLGYAYVNFVNPQDAANAMEHL 66
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + ++ N D + RK N + +KNL
Sbjct: 67 NFTPLNGKSIRVM-------FSNRDPSI------RKSGYAN----------VFIKNL--- 100
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
+ D K L + F G VL + G V+F + A+ A L +
Sbjct: 101 DISIDNKTLHDTFAAFGFVLSSKVAVDSIGQSKGYGFVQFDNEESAQNAIKELNGMLIND 160
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G+F +E+++ G P+
Sbjct: 161 KKVYV-----GLFVNRQERAQ---------------------------VDGSPKF----- 183
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
T +Y+KN + T++ + + F G I S V + D KS +G
Sbjct: 184 ----------TNVYVKNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKS------RCFG 227
Query: 631 FVQFYTRESLNQALKVLQNSSL-DEHQIELKRSNRNLESEATTVKR----KSSNVAKQTG 685
FV F + +S A++ L +++ D+ + + R+ R E EA R + K G
Sbjct: 228 FVNFESPDSAVAAVERLNGTTVNDDKVLYVGRAQRKAEREAELKARFELERIRKYEKYHG 287
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ + V+N+ + +++ELF FG + ++ + +G +G+GFV F A RA+
Sbjct: 288 TNLYVKNLDYNINDDKLKELFSEFGTITSCKV--MLEPNGRSKGYGFVAFSAPRNANRAL 345
Query: 746 KALCQSTHLYGRR 758
+ + + GRR
Sbjct: 346 HEM--NGKMIGRR 356
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
+ +LY+ +L N E + + F + GPI S+ V R + + S+GY +V F +
Sbjct: 5 NASLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDETNR------SLGYAYVNFVNPQD 58
Query: 640 LNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQ 699
A++ L + L+ I + SNR+ ++ K + + ++N+
Sbjct: 59 AANAMEHLNFTPLNGKSIRVMFSNRD------------PSIRKSGYANVFIKNLDISIDN 106
Query: 700 SEVEELFKAFGELKFVRLPKKMVGS-GLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG FV K V S G +G+GFV+F + A+ A+K L
Sbjct: 107 KTLHDTFAAFG---FVLSSKVAVDSIGQSKGYGFVQFDNEESAQNAIKEL 153
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 95/459 (20%), Positives = 166/459 (36%), Gaps = 108/459 (23%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT------FLGMAYIGFKDEKNCNKAL-NK 277
++ V +L V + L F + P+ S+R LG AY+ F + ++ A+ +
Sbjct: 7 SLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDETNRSLGYAYVNFVNPQDAANAMEHL 66
Query: 278 NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG 337
N + GK + + ++D S + SG A+
Sbjct: 67 NFTPLNGKSIRVMFSNRDPSIRKSGYAN-------------------------------- 94
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
+F++NL ++ L F +G + + +D ++KG+ V F E A A +
Sbjct: 95 -VFIKNLDISIDNKTLHDTFAAFGFVLSSKVAVDS-IGQSKGYGFVQFDNEESAQNAIKE 152
Query: 398 LDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
L+G + + +++ ++ VDG F V VKN
Sbjct: 153 LNGMLINDKKVYVGLFVNRQERAQVDGS----------PKFTNV---------YVKNFSE 193
Query: 458 RTLPTDLKALFEPFGDLGRVLV-----PPYGITGLVEFLQKNQAKAAFNSLAYTKFKE-V 511
DL+ LF +G + +V G V F + A AA L T +
Sbjct: 194 TYTDEDLEQLFSTYGTITSAVVMKDTDGKSRCFGFVNFESPDSAVAAVERLNGTTVNDDK 253
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
LY+ G+ + K E E E + E + + G
Sbjct: 254 VLYV----------------GRAQRKAEREAELKARFELERIRKYEKYHG---------- 287
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
T LY+KNL++N +D ++ F + G I S V + + +S GYGF
Sbjct: 288 ---------TNLYVKNLDYNINDDKLKELFSEFGTITSCKVMLEPNGRSK------GYGF 332
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V F + N+AL + + + + + R E +A
Sbjct: 333 VAFSAPRNANRALHEMNGKMIGRRPLYVAVAQRKEERKA 371
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYV 83
T E L+ F GT+T + T+GK R F F+ + D A AA++ N T V
Sbjct: 196 TDEDLEQLFSTYGTITSAVVMKDTDGKSRCFGFVNFESPDSAVAAVERLNGTTV 249
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 13/207 (6%)
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E E++ ++ + +P L+I NL++N E+ + R F++ G + V + +D
Sbjct: 228 EPEQSPKKAKTEDPNVTGNLFIGNLSWNVDEEWLTREFEEFGELKGVRIITDRD-----S 282
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK----RSN--RNLESEATTVKRKS 677
S G+G+V+F E +AL+ + LD I L R N +N + +++
Sbjct: 283 GRSKGFGYVEFENAEDAAKALEAKNGAELDNRAIRLDFSVPRQNNAQNPQQRGQERRQQY 342
Query: 678 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
+ A + + V N+ F A + V E F+ G + +RLP SG +GFG+VE +
Sbjct: 343 GDKASEPSQTLFVGNLSFDATEDMVREYFEEHGSINGIRLPTDRE-SGAPKGFGYVEMGS 401
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWA 764
+EAK A +AL Q L GR + L+++
Sbjct: 402 IDEAKAAYEAL-QGADLGGRPMRLDYS 427
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
ED +G +F+ NLS+ V E+ LT+ FE++G L V + D+++ ++KGF V F E
Sbjct: 239 EDPNVTGNLFIGNLSWNVDEEWLTREFEEFGELKGVRIITDRDSGRSKGFGYVEFENAED 298
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
A +A + +G R + L P++N + ++ D ++ + +
Sbjct: 299 AAKALEAKNGAELDNRAIRLDFSVPRQNNAQNPQQRGQERRQQYGDKASEPSQ-----TL 353
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSL 503
V NL + ++ FE G + + +P P G G VE ++AKAA+ +L
Sbjct: 354 FVGNLSFDATEDMVREYFEEHGSINGIRLPTDRESGAPKGF-GYVEMGSIDEAKAAYEAL 412
Query: 504 AYTKFKEVPLYLEWA 518
P+ L+++
Sbjct: 413 QGADLGGRPMRLDYS 427
>gi|402086828|gb|EJT81726.1| nucleolar protein 4 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 749
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 149/369 (40%), Gaps = 68/369 (18%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ E +FVR+L T + LT+ F ++ P+ + +D +T ++G+ VTF P+ A
Sbjct: 45 VEERRSLFVRSLPTGATGESLTEFFSQHFPVKHATVVVDPKTKTSRGYGFVTFTDPDDAI 104
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCC-ISERKLDAFNQVVEARSKRII 450
QA + L+ + GR L L +P+ G V + + K + E R +
Sbjct: 105 QAKEKLNNELLDGRRLRLDIAEPRHRAATKAGVPVETSKVFQEKQKREEEQAENRKAPKL 164
Query: 451 LVKNLPYRTLPTD-LKALFEPFGDLGRVLVP----PYGITGLVEFLQKNQAKAAFNSLAY 505
+++NLP+ ++ L ALF+ FG + +P G + + A+ A L
Sbjct: 165 IIRNLPWSIKSSEQLSALFKGFGKVKFADLPNNKGKLSGFGFITLRGRKNAETAIEKLNG 224
Query: 506 TKFKEVPLYLEWAPEGVFAEAKE-------KSKGKEKEKNEEEGEEGEEEKKENTAEEDN 558
P+ ++WA E E ++ K K KE ++E + E + K N + +
Sbjct: 225 KTVDGRPIAVDWAVEKSVWEQQQAPEAETPKKKSAAKETSKERKSDDEPKPKSNPKKAAD 284
Query: 559 QQGVPE-----VEENVE------------------------------------------E 571
E +E+N+E +
Sbjct: 285 DFDEDEDIRNFLEKNMETLESEDEDEDEDEDEDGSSEKDEEDEDDEEDDDDEDGGAEVGD 344
Query: 572 DEEREPEPD--TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
D+++ P D +TL+I+N+ F +T++ ++ HF + G + V K P G
Sbjct: 345 DKKKHPSSDNASTLFIRNVPFTTTDEQLKEHFSQFGAVRYARVVMDHATKRPA-----GK 399
Query: 630 GFVQFYTRE 638
GFV F+ E
Sbjct: 400 GFVCFFNVE 408
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 23/199 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+L++++L +T +S+ F + P+ TV DPK+ S GYGFV F +
Sbjct: 50 SLFVRSLPTGATGESLTEFFSQHFPVKHATVV--VDPKTK---TSRGYGFVTFTDPDDAI 104
Query: 642 QALKVLQNSSLDEHQIEL--------KRSNRNLESEATTV-----KRKSSNVAKQTGSKI 688
QA + L N LD ++ L + + E + V KR+ + K+
Sbjct: 105 QAKEKLNNELLDGRRLRLDIAEPRHRAATKAGVPVETSKVFQEKQKREEEQAENRKAPKL 164
Query: 689 LVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
++RN+P+ K SE + LFK FG++KF LP G GFGF+ + A+ A++
Sbjct: 165 IIRNLPWSIKSSEQLSALFKGFGKVKFADLPN---NKGKLSGFGFITLRGRKNAETAIEK 221
Query: 748 LCQSTHLYGRRLVLEWAEE 766
L T + GR + ++WA E
Sbjct: 222 LNGKT-VDGRPIAVDWAVE 239
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 201 SKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV---- 253
S+D+ + PP+ KA V +R+ ++ V++LP G + L +F P+ A+V
Sbjct: 27 SEDSTSAANPTPPIKKARVEERR--SLFVRSLPTGATGESLTEFFSQHFPVKHATVVVDP 84
Query: 254 -RTTFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNAS 311
T G ++ F D + +A K N G++L + + A+ A
Sbjct: 85 KTKTSRGYGFVTFTDPDDAIQAKEKLNNELLDGRRLRL------DIAEPRHRAATKAGVP 138
Query: 312 MENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTV-TEDDLTKLFEKYGPLAEVILPI 370
+E K K + + Q AE+ ++ ++ +RNL +++ + + L+ LF+ +G + LP
Sbjct: 139 VETSKVFQEKQKREEEQ-AEN-RKAPKLIIRNLPWSIKSSEQLSALFKGFGKVKFADLPN 196
Query: 371 DKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+K K GF +T ++A A + L+G GR + +
Sbjct: 197 NK--GKLSGFGFITLRGRKNAETAIEKLNGKTVDGRPIAV 234
>gi|242077148|ref|XP_002448510.1| hypothetical protein SORBIDRAFT_06g028205 [Sorghum bicolor]
gi|241939693|gb|EES12838.1| hypothetical protein SORBIDRAFT_06g028205 [Sorghum bicolor]
Length = 184
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ + +L+ F KG VTD ++ T +GK R+FAFIGY + A+ AL YFNNTY+ + +I
Sbjct: 26 VDERRLREVFSRKGEVTDAKVIRTKDGKSRQFAFIGYRTNEDAEEALKYFNNTYIDTCKI 85
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAY--QKLHNI----APKQDLKPEHTKDSKPGKKSK 142
E +GD P+ WS+++ Y + +N AP + K + T G K
Sbjct: 86 TCEVARKIGDPDAPRPWSRHSLKKPEYGSKDKNNAGTVDAPPKGSKAQGTSAHVSGSKGS 145
Query: 143 --NDPTFSDFLQ 152
+DP F +FL+
Sbjct: 146 VPDDPKFLEFLE 157
>gi|429856401|gb|ELA31310.1| RNA recognition motif containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 836
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 148/366 (40%), Gaps = 65/366 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T + LT F ++ P+ + +D T ++G+ VT + A A + L
Sbjct: 121 LFVRSLPANATSESLTDFFSEHFPVKHATVVLDPTTKASRGYGFVTLTDADDANDAKKKL 180
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ +++ GR + + + + + N D V S K + EAR ++++NLP+
Sbjct: 181 NNSLWEGRRIRIDLAEARHRD-NKDSVVGAAASSEKQKRAQALEEARKPPKLIIRNLPWT 239
Query: 459 TLPTD-LKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
++ L ALF +G + +P G V + A+ A SL P+
Sbjct: 240 IKNSEQLSALFRAYGIVKYADLPQNKGKLKGFGFVTLRGRKNAETALKSLNGKVIDGRPI 299
Query: 514 YLEWA----------PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE---NTAEEDNQQ 560
++WA + AE EK K K+K +EE ++ K + N A+ D +
Sbjct: 300 AVDWAVDKSEWEKQNKDDKNAEGDEKPKTKKKNDAKEEKKKASSSKNDEDPNDADADLEN 359
Query: 561 GVPEVEENVEED---------------------------------EEREPEP-------- 579
+ N+E++ EE++ P
Sbjct: 360 FMKTFGANLEDEPESDDNKDDEDKDEEDEDEDELSDEEDFSNEEEEEKDSAPKKQASTGN 419
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
+T++I+NL F T++ ++ HF + GP+ V + ++ P G GFV F E
Sbjct: 420 QSTIFIRNLPFTVTDEQLKTHFVQFGPVRYARVVKDRETDRPA-----GTGFVCFVKEED 474
Query: 640 LNQALK 645
+K
Sbjct: 475 ARACIK 480
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 104/198 (52%), Gaps = 20/198 (10%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
E + +L++++L N+T +S+ F + P+ TV DP + S GYGFV
Sbjct: 116 EANRSLFVRSLPANATSESLTDFFSEHFPVKHATVVL--DPTTKA---SRGYGFVTLTDA 170
Query: 638 ESLNQALKVLQNSSLDEHQIELK------RSNRN--LESEATTVKRKSSNVAKQTGS--K 687
+ N A K L NS + +I + R N++ + + A++ K+K + ++ K
Sbjct: 171 DDANDAKKKLNNSLWEGRRIRIDLAEARHRDNKDSVVGAAASSEKQKRAQALEEARKPPK 230
Query: 688 ILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+++RN+P+ K SE + LF+A+G +K+ LP+ G +GFGFV + A+ A+K
Sbjct: 231 LIIRNLPWTIKNSEQLSALFRAYGIVKYADLPQ---NKGKLKGFGFVTLRGRKNAETALK 287
Query: 747 ALCQSTHLYGRRLVLEWA 764
+L + GR + ++WA
Sbjct: 288 SL-NGKVIDGRPIAVDWA 304
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 159/418 (38%), Gaps = 83/418 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L + VT+ L F + G + V + D T ++ G+ V F P+ A +A Q L
Sbjct: 22 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 81
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ G+ + ++ H S R+ A N I +KNL
Sbjct: 82 NYIPLYGKPIRVM-------------YSHRDPSVRRSGAGN----------IFIKNLDES 118
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
D KAL + F G ++ K A +S
Sbjct: 119 I---DHKALHDTFSSFGNIV----------------SCKVAVDS---------------- 143
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
+ K G + NEE ++ E K D Q V E D
Sbjct: 144 ------SGQSKGYGFVQYANEESAQKAIE-KLNGMLLNDKQVYVGPFLRRQERDSTANKT 196
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +Y+KNL ++T+D ++ F + G I S V + + K S G+GFV F +
Sbjct: 197 KFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGK------SKGFGFVNFENAD 250
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA----KQTGSKILVRNIP 694
+A++ L D+ + + R+ + E E R N+ K S + V+N+
Sbjct: 251 DAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLD 310
Query: 695 FQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
+++E+F FG + K +R P +G +G GFV F T EA AM L
Sbjct: 311 PSISDEKLKEIFSPFGTVTSSKVMRDP-----NGTSKGSGFVAFATPEEATEAMSQLS 363
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 19/169 (11%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
+T+LY+ +L+FN T+ + F + G + +V V R + S+GYG+V F +
Sbjct: 19 NTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRR-----SLGYGYVNFTNPQD 73
Query: 640 LNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQ 699
+A++ L L I + S+R+ +V+R + I ++N+
Sbjct: 74 AARAIQELNYIPLYGKPIRVMYSHRD-----PSVRRSGAG-------NIFIKNLDESIDH 121
Query: 700 SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F +FG + V + SG +G+GFV++ + A++A++ L
Sbjct: 122 KALHDTFSSFGNI--VSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKL 168
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 154/413 (37%), Gaps = 100/413 (24%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG Y+ F + ++ +A+ + N GK + + +D S + SGA
Sbjct: 61 LGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGA------------- 107
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
G IF++NL ++ L F +G + + +D + +
Sbjct: 108 --------------------GNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQ 146
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KG+ V + E A +A + L+G + + +++ P ++ + K
Sbjct: 147 SKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTK--------- 197
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFL 491
F V VKNL T DLK F +G + +V G G V F
Sbjct: 198 -FTNV---------YVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFE 247
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
+ A A SL KF + KE G+ ++K+E E E
Sbjct: 248 NADDAARAVESLNGHKFDD----------------KEWYVGRAQKKSERETELRV----- 286
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
E+N++E ++ + LY+KNL+ + +++ ++ F G + S
Sbjct: 287 ------------RYEQNLKEAADKFQS--SNLYVKNLDPSISDEKLKEIFSPFGTVTSSK 332
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
V R DP S G GFV F T E +A+ L ++ + + + R
Sbjct: 333 VMR--DPNG----TSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQR 379
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYF-------KPLPLASVRTTFLGMAYIGFKDEKNCN 272
+K ++ + VKNL DLK F + + G ++ F++ +
Sbjct: 194 NKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAA 253
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+A+ + LN +K+ D+ Y G A + E ++ ++ E +++ A D
Sbjct: 254 RAV---------ESLNGHKF--DDKEWYVGRAQKKSERETE-LRVRY----EQNLKEAAD 297
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+S ++V+NL +++++ L ++F +G + + D +KG V F PE AT
Sbjct: 298 KFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDP-NGTSKGSGFVAFATPEEAT 356
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN 418
+A L G + + L++ + KE+
Sbjct: 357 EAMSQLSGKMIESKPLYVAIAQRKED 382
>gi|224085260|ref|XP_002307526.1| predicted protein [Populus trichocarpa]
gi|222856975|gb|EEE94522.1| predicted protein [Populus trichocarpa]
Length = 649
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 174/432 (40%), Gaps = 98/432 (22%)
Query: 334 AESGR-----IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP 388
AE+G+ ++V +L + V E L LF + + + + D+ + G+A V F P
Sbjct: 25 AEAGQFPNSSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNP 84
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
+ A+ A + L+ T G+ + ++ H S RK N
Sbjct: 85 QDASNAMELLNFTPLNGKAIRIMVS-------------HRDPSMRKSGHAN--------- 122
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAF 500
+ +KNL D KAL E F G VL + G V+F + A++A
Sbjct: 123 -VFIKNL---DTSIDNKALQETFASFGSVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAI 178
Query: 501 NSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQ 560
N L G+ KE G+ +E+ E T
Sbjct: 179 NRL----------------NGMLINDKEVFVGRFVR---------HQERIEAT------- 206
Query: 561 GVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
G P+ T +Y+KNL+ ++++ +++ F G I S V + + KS
Sbjct: 207 GSPKF---------------TNVYVKNLSETTSDEDLKKFFSNYGAITSAIVMKDQSGKS 251
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----K 676
G+GFV F + +S A++ L ++ ++ + R+ R E EA R +
Sbjct: 252 K------GFGFVNFQSPDSAAAAVEKLNGTTFNDKVWYVGRAQRKGEREAELKARFEQER 305
Query: 677 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
+S K + + ++N+ + +++ELF FG + ++ + GL +G GFV F
Sbjct: 306 NSRYEKLKAANLYLKNLDDKIDDEKLKELFSEFGSITSCKV--MLDQQGLSKGSGFVAFS 363
Query: 737 TKNEAKRAMKAL 748
T EA RA+ +
Sbjct: 364 TPEEASRALNGM 375
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NLS T +++DL K F YG + I+ D ++ K+KGF V F P+ A A + L
Sbjct: 214 VYVKNLSETTSDEDLKKFFSNYGAITSAIVMKD-QSGKSKGFGFVNFQSPDSAAAAVEKL 272
Query: 399 DGTVFLGRMLHLIPGKPK-ENEGNVDGKVHCCISER--KLDAFNQVVEARSKRIILVKNL 455
+GT F ++ ++ + K E E + + + R KL A N + +KNL
Sbjct: 273 NGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKAAN----------LYLKNL 322
Query: 456 PYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTKFKE 510
+ LK LF FG + +V++ G+ +G V F +A A N + +
Sbjct: 323 DDKIDDEKLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALNGMNGKMIGK 382
Query: 511 VPLYLEWA 518
PLY+ A
Sbjct: 383 KPLYVAVA 390
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 156/432 (36%), Gaps = 116/432 (26%)
Query: 253 VRTTFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNAS 311
R LG AY+ F + ++ + A+ N + GK + I +D S + SG A+
Sbjct: 69 ARRASLGYAYVNFSNPQDASNAMELLNFTPLNGKAIRIMVSHRDPSMRKSGHAN------ 122
Query: 312 MENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPID 371
+F++NL ++ L + F +G + + +D
Sbjct: 123 ---------------------------VFIKNLDTSIDNKALQETFASFGSVLSCKVAVD 155
Query: 372 KETDKTKGFALVTFLMPEHATQAYQHLDGT------VFLGRMLHLIPGKPKENEGNVDGK 425
++KG+ V F E A A L+G VF+GR + + E +
Sbjct: 156 N-NGQSKGYGFVQFENEEAAQSAINRLNGMLINDKEVFVGRFV-------RHQE-----R 202
Query: 426 VHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV------ 479
+ S + + + VKNL T DLK F +G + +V
Sbjct: 203 IEATGSPKFTNVY-------------VKNLSETTSDEDLKKFFSNYGAITSAIVMKDQSG 249
Query: 480 PPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNE 539
G G V F + A AA L T F + Y+ G+ + K E
Sbjct: 250 KSKGF-GFVNFQSPDSAAAAVEKLNGTTFNDKVWYV----------------GRAQRKGE 292
Query: 540 EEGE-EGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIR 598
E E + E++ N+ E + LY+KNL+ ++ ++
Sbjct: 293 REAELKARFEQERNSRYEKLKA--------------------ANLYLKNLDDKIDDEKLK 332
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
F + G I S V + Q LS G GFV F T E ++AL + + + +
Sbjct: 333 ELFSEFGSITSCKVMLDQ------QGLSKGSGFVAFSTPEEASRALNGMNGKMIGKKPLY 386
Query: 659 LKRSNRNLESEA 670
+ + R E +A
Sbjct: 387 VAVAQRREERKA 398
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + +++ F G + S VA + GQ S GYGFVQF E+
Sbjct: 123 VFIKNLDTSIDNKALQETFASFGSVLSCKVAVDNN----GQ--SKGYGFVQFENEEAAQS 176
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A+ L +++ ++ + R R+ E T K +NV V+N+ ++
Sbjct: 177 AINRLNGMLINDKEVFVGRFVRHQERIEATGSPKFTNV--------YVKNLSETTSDEDL 228
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
++ F +G + + K SG +GFGFV F + + A A++ L +T
Sbjct: 229 KKFFSNYGAITSAIVMKDQ--SGKSKGFGFVNFQSPDSAAAAVEKLNGTT 276
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 100/193 (51%), Gaps = 11/193 (5%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP L+I NL++N E+ +R F++ G +A V + +D S G+G+V+F
Sbjct: 242 EPTEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRD-----SGRSKGFGYVEFT 296
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSN-RNLESEATTVKRKSSNVAKQTGSK---ILVR 691
E +A +++ LD ++ + +N R+ + + ++ N Q + + +
Sbjct: 297 NAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFGDQRSPESDTLFIG 356
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
NI F A ++ + E F +G + VRLP SG +GFG+V+F + +EA+ A ++L S
Sbjct: 357 NIAFSADENMISETFAEYGSILGVRLPTDPE-SGRPKGFGYVQFSSIDEARSAFESLNGS 415
Query: 752 THLYGRRLVLEWA 764
L GR + L+++
Sbjct: 416 -ELAGRAMRLDFS 427
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +F+ N++++ E+ +++ F +YG + V LP D E+ + KGF V F + A A
Sbjct: 349 ESDTLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEARSA 408
Query: 395 YQHLDGTVFLGRMLHLIPGKPKEN 418
++ L+G+ GR + L P++N
Sbjct: 409 FESLNGSELAGRAMRLDFSTPRQN 432
>gi|307111066|gb|EFN59301.1| hypothetical protein CHLNCDRAFT_19359, partial [Chlorella
variabilis]
Length = 176
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ +L+ +F KG VTD ++ T +GK R F F+G+ +A+AA+ YFN +++ + R+
Sbjct: 38 VDDRRLRDQFAAKGEVTDAKVMRTRDGKSRCFGFVGFRTPAEAEAAVRYFNKSFMDTMRL 97
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTFS 148
VE G P++WSKY +SA+++L P+ + GK + DP
Sbjct: 98 AVEFAYKFGSGEAPRAWSKYTEGTSAHKRL-TAPPQTGANDVPLGEGAKGKAKQPDPKLR 156
Query: 149 DFLQL 153
+FLQ+
Sbjct: 157 EFLQV 161
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 14/187 (7%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++ +L++N +D ++ FK CG + S V ++ S G+G+V F +
Sbjct: 254 TLFVGSLSWNVDDDMLKEEFKFCGEVVSARVITDRE-----TGRSKGFGYVDFASPADAE 308
Query: 642 QALKVLQNSSLDEHQIELK----RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
+A Q + +D QI++ +SN N ++ +K +V + V N+PF A
Sbjct: 309 KAHAEKQGAFIDGRQIKVDFSTGKSNNN---DSADRAKKFGDVTSPESDTLFVGNLPFDA 365
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ V E F + E+K +RLP SG +GFG+V F + +AK A L + + GR
Sbjct: 366 DEDVVSEFFGSVAEIKSLRLPTDQE-SGRRKGFGYVSFNSVEDAKSAFTQLSGQS-INGR 423
Query: 758 RLVLEWA 764
L+++
Sbjct: 424 PCRLDYS 430
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 26/164 (15%)
Query: 259 GMAYIGFKDEKNCNKA-LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G Y+ F + KA K +F G+Q+ + +S S NNN S + K
Sbjct: 295 GFGYVDFASPADAEKAHAEKQGAFIDGRQIKV-DFSTGKS---------NNNDSADRAK- 343
Query: 318 KHWKSQEDSVQFAEDIA-ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
+F + + ES +FV NL + ED +++ F + + LP D+E+ +
Sbjct: 344 ----------KFGDVTSPESDTLFVGNLPFDADEDVVSEFFGSVAEIKSLRLPTDQESGR 393
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL---IPGKPKE 417
KGF V+F E A A+ L G GR L P P+E
Sbjct: 394 RKGFGYVSFNSVEDAKSAFTQLSGQSINGRPCRLDYSTPKPPRE 437
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 19/196 (9%)
Query: 332 DIAESGR---IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP 388
D AES + +FV +LS+ V +D L + F+ G + + D+ET ++KGF V F P
Sbjct: 245 DAAESDKPATLFVGSLSWNVDDDMLKEEFKFCGEVVSARVITDRETGRSKGFGYVDFASP 304
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
A +A+ G GR + + K N + S + F V S
Sbjct: 305 ADAEKAHAEKQGAFIDGRQIKVDFSTGKSNNND---------SADRAKKFGDVTSPESD- 354
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNS 502
+ V NLP+ + F ++ + +P + G V F AK+AF
Sbjct: 355 TLFVGNLPFDADEDVVSEFFGSVAEIKSLRLPTDQESGRRKGFGYVSFNSVEDAKSAFTQ 414
Query: 503 LAYTKFKEVPLYLEWA 518
L+ P L+++
Sbjct: 415 LSGQSINGRPCRLDYS 430
>gi|448112633|ref|XP_004202146.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
gi|359465135|emb|CCE88840.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
Length = 625
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 186/464 (40%), Gaps = 106/464 (22%)
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
ED+ ++ S ++V L+ +V E L ++F G ++ + + D T K+ G+A V
Sbjct: 37 EDAADSSQLPDTSASLYVGELNPSVNEALLFEIFSPVGQVSSIRVCRDAVTKKSLGYAYV 96
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAF 438
F E +A + L+ ++ GR ++ P + EGN
Sbjct: 97 NFHKLEDGEKAIEELNYSLIDGRPCRIMWSQRDPSLRRNGEGN----------------- 139
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEF 490
I +KNL D KAL + F G++L G V +
Sbjct: 140 -----------IFIKNL---HPAIDNKALHDTFSAFGKILSCKVATDEQGNSKCFGFVHY 185
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
AKAA ++ G+ +E GK K + E + EE K
Sbjct: 186 ETAEAAKAAIENV----------------NGMLLNDREVYVGKHVSKKDRESKF--EEMK 227
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
N T +Y+KN++ +E+ +R+ F+ G I S+
Sbjct: 228 ANF---------------------------TNVYVKNIDLGFSEEEMRKLFEPYGKITSL 260
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
+ + + K S G+GFV F + E+ +A++ L + ++ ++ + R+ + E
Sbjct: 261 HLEKDAEGK------SKGFGFVNFESHEAAVKAVEELNDKDINGQKLYVGRAQKKRE-RI 313
Query: 671 TTVKR-----KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS- 724
+KR + ++K G + V+N+ ++EE FK FG + R+ MV
Sbjct: 314 EELKRQYEAARLEKLSKYQGVNLFVKNLDDSIDSVKLEEEFKPFGTITSARV---MVDEH 370
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
G +GFGFV F + EA +A+ + Q +G+ L + A+ D
Sbjct: 371 GKSKGFGFVCFSSPEEATKAITEMNQRM-FHGKPLYVALAQRKD 413
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 17/231 (7%)
Query: 297 SAKYSGAADDNNNASMENIK----AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+A+ + AA +N N + N + KH ++ +F E A ++V+N+ +E++
Sbjct: 187 TAEAAKAAIENVNGMLLNDREVYVGKHVSKKDRESKFEEMKANFTNVYVKNIDLGFSEEE 246
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
+ KLFE YG + + L D E K+KGF V F E A +A + L+ G+ L++
Sbjct: 247 MRKLFEPYGKITSLHLEKDAE-GKSKGFGFVNFESHEAAVKAVEELNDKDINGQKLYVGR 305
Query: 413 GKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
+ K + + KL + V + VKNL L+ F+PFG
Sbjct: 306 AQKKRERIEELKRQYEAARLEKLSKYQGVN-------LFVKNLDDSIDSVKLEEEFKPFG 358
Query: 473 DL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+ RV+V +G + G V F +A A + F PLY+ A
Sbjct: 359 TITSARVMVDEHGKSKGFGFVCFSSPEEATKAITEMNQRMFHGKPLYVALA 409
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 99/200 (49%), Gaps = 20/200 (10%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
+ ++IKNL+ ++ F G I S VA + Q S +GFV + T E+
Sbjct: 137 EGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDE------QGNSKCFGFVHYETAEA 190
Query: 640 LNQALKVLQNSSLDEHQIELKR--SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
A++ + L++ ++ + + S ++ ES+ +K +NV V+NI
Sbjct: 191 AKAAIENVNGMLLNDREVYVGKHVSKKDRESKFEEMKANFTNV--------YVKNIDLGF 242
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ E+ +LF+ +G++ + L K G +GFGFV F + A +A++ L + G+
Sbjct: 243 SEEEMRKLFEPYGKITSLHLEKD--AEGKSKGFGFVNFESHEAAVKAVEEL-NDKDINGQ 299
Query: 758 RLVLEWAEEA-DNVEDIRKR 776
+L + A++ + +E+++++
Sbjct: 300 KLYVGRAQKKRERIEELKRQ 319
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 90/200 (45%), Gaps = 30/200 (15%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKDEKNC 271
K + + VKN+ G +++++ F+P + + L G ++ F+ +
Sbjct: 227 KANFTNVYVKNIDLGFSEEEMRKLFEPY--GKITSLHLEKDAEGKSKGFGFVNFESHEAA 284
Query: 272 NKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA 330
KA+ + N G++L + + K +E +K ++ ++ + +
Sbjct: 285 VKAVEELNDKDINGQKLYVGRAQKKRE-------------RIEELKRQYEAARLEKLSKY 331
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
+ + +FV+NL ++ L + F+ +G + + +D E K+KGF V F PE
Sbjct: 332 QGV----NLFVKNLDDSIDSVKLEEEFKPFGTITSARVMVD-EHGKSKGFGFVCFSSPEE 386
Query: 391 ATQAYQHLDGTVFLGRMLHL 410
AT+A ++ +F G+ L++
Sbjct: 387 ATKAITEMNQRMFHGKPLYV 406
>gi|340055425|emb|CCC49744.1| putative RNA-binding protein, fragment, partial [Trypanosoma vivax
Y486]
Length = 853
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 58/83 (69%), Gaps = 6/83 (7%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK-----MVGSGLHRGFGFVEFITKNEA 741
K++V+N+PF+A + ++ +LF A E+ VRLP+K HRGF FVEF+T+ EA
Sbjct: 768 KLVVKNVPFEATERDIRDLFSAVSEVHGVRLPRKNHQFSSHRQNNHRGFAFVEFLTEQEA 827
Query: 742 KRAMKALCQSTHLYGRRLVLEWA 764
+RA ++L +THLYGR LV+++A
Sbjct: 828 RRARESL-GATHLYGRHLVIQYA 849
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 28/159 (17%)
Query: 441 VVEARSKRIILVKNLPYRTLPTD---LKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAK 497
+++ARS ILVKN+ T P D L LF +G L P G L F A+
Sbjct: 505 LLKARSNTTILVKNITL-TQPEDATQLSKLFLRYGTLESTAFPSSGAFALFRFAHSQDAR 563
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEE-GEEGEEEKKENTAEE 556
AF L+Y FK VPL+LEWAP GV + NE++ G+ E EE
Sbjct: 564 IAFQRLSYKLFKNVPLFLEWAPIGVIS------------TNEDDVGKRDEAPASAREQEE 611
Query: 557 DNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTED 595
+ + P V P TL+I N+ F STED
Sbjct: 612 EESEAAPGVF-----------APVMTLFITNIPFTSTED 639
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKY-GPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
+ ES R+ + N+ + TEDD+ + + GP+ V +P+ ++T ++KG A V F+ + A
Sbjct: 308 VRESRRVRLGNIPFIATEDDVKQFASSHVGPVEAVHIPLTRDTRQSKGAAFVKFVRVDDA 367
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A G +F+GR+L +
Sbjct: 368 LRALTLCRGAIFMGRLLRV 386
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 563 PEVEENVEEDEE--------REPE-PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
P+ + EED E PE L++ NL++N E+ +R F++ G +A +
Sbjct: 211 PQKKRKAEEDAEPVAKKAKVDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELAGTRIV 270
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV 673
++ S G+G+V+F E +A +++ LD ++ L +N A
Sbjct: 271 TDRE-----SGRSRGFGYVEFVNVEDAVKAHTAKKDAELDGRKMNLDYANARTNGNANPR 325
Query: 674 KRKSSNVAKQTGSK-------ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 726
+R + N AK G + + + NI F A ++ V+ELF +G ++ +RLP SG
Sbjct: 326 ER-ADNRAKSFGDQTSPESDTLFIGNISFSADENMVQELFSKYGAIQGIRLPTDPE-SGR 383
Query: 727 HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+GFG+V+F + +EA+ A++A L GR + L+++
Sbjct: 384 PKGFGYVQFSSVDEARAALEA-EHGADLGGRSIRLDFS 420
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +F+ N+S++ E+ + +LF KYG + + LP D E+ + KGF V F + A A
Sbjct: 342 ESDTLFIGNISFSADENMVQELFSKYGAIQGIRLPTDPESGRPKGFGYVQFSSVDEARAA 401
Query: 395 YQHLDGTVFLGRMLHL 410
+ G GR + L
Sbjct: 402 LEAEHGADLGGRSIRL 417
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 100/193 (51%), Gaps = 11/193 (5%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP L+I NL++N E+ +R F++ G +A V + +D S G+G+V+F
Sbjct: 242 EPTEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRD-----TGRSKGFGYVEFT 296
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSN-RNLESEATTVKRKSSNVAKQTGSK---ILVR 691
E +A +++ LD ++ + +N R+ + + ++ N Q + + +
Sbjct: 297 NAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFGDQRSPESDTLFIG 356
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
NI F A ++ + E F +G + VRLP SG +GFG+V+F + +EA+ A ++L S
Sbjct: 357 NIAFSADENMISETFAEYGSILGVRLPTDPE-SGRPKGFGYVQFSSIDEARSAFESLNGS 415
Query: 752 THLYGRRLVLEWA 764
L GR + L+++
Sbjct: 416 -ELAGRAMRLDFS 427
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +F+ N++++ E+ +++ F +YG + V LP D E+ + KGF V F + A A
Sbjct: 349 ESDTLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSIDEARSA 408
Query: 395 YQHLDGTVFLGRMLHLIPGKPKEN 418
++ L+G+ GR + L P++N
Sbjct: 409 FESLNGSELAGRAMRLDFSTPRQN 432
>gi|255556766|ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 632
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 162/414 (39%), Gaps = 83/414 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V L V++ L F ++ LA V + D T ++ + V F+ PE A +A +
Sbjct: 15 LYVGELHCDVSDGQLVDAFSEFNTLASVRVCRDSSTGRSLCYGYVNFISPEDAIRAIETK 74
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+++ ++ S R DA + + VKNL
Sbjct: 75 NHTPLNGKLMRVM------------------WSHRDPDARRNGIGN-----VYVKNL--- 108
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+ D L E FG+ G VL K A
Sbjct: 109 SESIDNVGLQELFGEFGTVL----------------SCKVA------------------- 133
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
F + K K G + ++E+ E K + D Q V + V++ + P
Sbjct: 134 ---TFEDGKSKGHGFVQFESEDSANSAIE-KLNGSIVGDKQIYVGKF---VKKSDRVLPS 186
Query: 579 PD---TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
PD T LY+KNL+ TE+ ++ F + G I SV +AR + S G+GFV F
Sbjct: 187 PDAKYTNLYVKNLDPGITEELLQEKFSEFGKIVSVAIARDECGS------SRGFGFVNFE 240
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK----RKSSNVAKQTGSKILVR 691
+ A++ + + L + + R+ + E E + ++ + K GS + V+
Sbjct: 241 NPDDARWAMERMNGTELGSKVLYVGRAQKRAEREQILRRQFEEKRKEQITKFKGSNVYVK 300
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
NI E+ E F G + +L K G +GFGFV F + EA +A+
Sbjct: 301 NIDDDVTDEELREHFSQCGTITSAKLMKD--DKGRSKGFGFVCFSSSEEASKAV 352
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 25/198 (12%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+Y+KNL+ + ++ F + G + S VA +D KS G+GFVQF + +S N
Sbjct: 103 VYVKNLSESIDNVGLQELFGEFGTVLSCKVATFEDGKS------KGHGFVQFESEDSANS 156
Query: 643 ALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
A++ L S + + QI + K+S+R L S AK T + V+N+
Sbjct: 157 AIEKLNGSIVGDKQIYVGKFVKKSDRVLPSPD----------AKYT--NLYVKNLDPGIT 204
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
+ ++E F FG++ V + + GS RGFGFV F ++A+ AM+ + T L +
Sbjct: 205 EELLQEKFSEFGKIVSVAIARDECGSS--RGFGFVNFENPDDARWAMERM-NGTELGSKV 261
Query: 759 LVLEWAEEADNVEDIRKR 776
L + A++ E I +R
Sbjct: 262 LYVGRAQKRAEREQILRR 279
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 126/318 (39%), Gaps = 66/318 (20%)
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G ++V+NLS ++ L +LF ++G + + E K+KG V F + A A +
Sbjct: 101 GNVYVKNLSESIDNVGLQELFGEFGTVLSCKVAT-FEDGKSKGHGFVQFESEDSANSAIE 159
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
L+G++ + +++ GK +K D +A+ + VKNL
Sbjct: 160 KLNGSIVGDKQIYV-------------GKF-----VKKSDRVLPSPDAKYTN-LYVKNLD 200
Query: 457 YRTLPTDLKALFEPFGDLGRVLVP--PYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEV 511
L+ F FG + V + G + G V F + A+ A + T+
Sbjct: 201 PGITEELLQEKFSEFGKIVSVAIARDECGSSRGFGFVNFENPDDARWAMERMNGTELGSK 260
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
LY+ A K E+ + + EE++KE +
Sbjct: 261 VLYVGRAQ-------------KRAEREQILRRQFEEKRKEQITKFKG------------- 294
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
+ +Y+KN++ + T++ +R HF +CG I S + KD K S G+GF
Sbjct: 295 ---------SNVYVKNIDDDVTDEELREHFSQCGTITSAKLM--KDDKG----RSKGFGF 339
Query: 632 VQFYTRESLNQALKVLQN 649
V F + E ++A+
Sbjct: 340 VCFSSSEEASKAVNTFHG 357
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 125/312 (40%), Gaps = 64/312 (20%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLP--LASVRTTF-----LGMAYIGFKDEKNCNKALNK-N 278
+ VKNL + L+ F L+ TF G ++ F+ E + N A+ K N
Sbjct: 103 VYVKNLSESIDNVGLQELFGEFGTVLSCKVATFEDGKSKGHGFVQFESEDSANSAIEKLN 162
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
S KQ+ + K+ K + D V + D A+
Sbjct: 163 GSIVGDKQIYVGKFVK----------------------------KSDRVLPSPD-AKYTN 193
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NL +TE+ L + F ++G + V + D E ++GF V F P+ A A + +
Sbjct: 194 LYVKNLDPGITEELLQEKFSEFGKIVSVAIARD-ECGSSRGFGFVNFENPDDARWAMERM 252
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-------IL 451
+GT ++L++ G+ ++ +ER+ Q E R ++I +
Sbjct: 253 NGTELGSKVLYV--GRAQKR------------AEREQILRRQFEEKRKEQITKFKGSNVY 298
Query: 452 VKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYT 506
VKN+ +L+ F G + +++ G + G V F +A A N+
Sbjct: 299 VKNIDDDVTDEELREHFSQCGTITSAKLMKDDKGRSKGFGFVCFSSSEEASKAVNTFHGY 358
Query: 507 KFKEVPLYLEWA 518
F PLY+ A
Sbjct: 359 MFHRKPLYVAIA 370
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 159/418 (38%), Gaps = 83/418 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L + VT+ L F + G + V + D T ++ G+ V F P+ A +A Q L
Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ G+ + ++ H S R+ A N I +KNL
Sbjct: 98 NYIPLYGKPIRVM-------------YSHRDPSVRRSGAGN----------IFIKNLDES 134
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
D KAL + F G ++ K A +S
Sbjct: 135 I---DHKALHDTFSSFGNIV----------------SCKVAVDS---------------- 159
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
+ K G + NEE ++ E K D Q V E D
Sbjct: 160 ------SGQSKGYGFVQYANEESAQKAIE-KLNGMLLNDKQVYVGPFLRRQERDSTANKT 212
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +Y+KNL ++T+D ++ F + G I S V + + K S G+GFV F +
Sbjct: 213 KFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGK------SKGFGFVNFENAD 266
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA----KQTGSKILVRNIP 694
+A++ L D+ + + R+ + E E R N+ K S + V+N+
Sbjct: 267 DAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLD 326
Query: 695 FQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
+++E+F FG + K +R P +G +G GFV F T EA AM L
Sbjct: 327 PSISDEKLKEIFSPFGTVTSSKVMRDP-----NGTSKGSGFVAFATPEEATEAMSQLS 379
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 19/169 (11%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
+T+LY+ +L+FN T+ + F + G + +V V R + S+GYG+V F +
Sbjct: 35 NTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRR-----SLGYGYVNFTNPQD 89
Query: 640 LNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQ 699
+A++ L L I + S+R+ +V+R + I ++N+
Sbjct: 90 AARAIQELNYIPLYGKPIRVMYSHRD-----PSVRRSGAG-------NIFIKNLDESIDH 137
Query: 700 SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F +FG + V + SG +G+GFV++ + A++A++ L
Sbjct: 138 KALHDTFSSFGNI--VSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKL 184
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 154/413 (37%), Gaps = 100/413 (24%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG Y+ F + ++ +A+ + N GK + + +D S + SGA
Sbjct: 77 LGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGA------------- 123
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
G IF++NL ++ L F +G + + +D + +
Sbjct: 124 --------------------GNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQ 162
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KG+ V + E A +A + L+G + + +++ P ++ + K
Sbjct: 163 SKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTK--------- 213
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFL 491
F V VKNL T DLK F +G + +V G G V F
Sbjct: 214 -FTNV---------YVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFE 263
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
+ A A SL KF + KE G+ ++K+E E E
Sbjct: 264 NADDAARAVESLNGHKFDD----------------KEWYVGRAQKKSERETELRV----- 302
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
E+N++E ++ + LY+KNL+ + +++ ++ F G + S
Sbjct: 303 ------------RYEQNLKEAADKFQS--SNLYVKNLDPSISDEKLKEIFSPFGTVTSSK 348
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
V R DP S G GFV F T E +A+ L ++ + + + R
Sbjct: 349 VMR--DPNG----TSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQR 395
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYF-------KPLPLASVRTTFLGMAYIGFKDEKNCN 272
+K ++ + VKNL DLK F + + G ++ F++ +
Sbjct: 210 NKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAA 269
Query: 273 KALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
+A+ + LN +K+ D+ Y G A + E ++ ++ E +++ A D
Sbjct: 270 RAV---------ESLNGHKF--DDKEWYVGRAQKKSERETE-LRVRY----EQNLKEAAD 313
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+S ++V+NL +++++ L ++F +G + + D +KG V F PE AT
Sbjct: 314 KFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDP-NGTSKGSGFVAFATPEEAT 372
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN 418
+A L G + + L++ + KE+
Sbjct: 373 EAMSQLSGKMIESKPLYVAIAQRKED 398
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 167/449 (37%), Gaps = 107/449 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V L +VTE L ++F GP+A + + D T ++ G+A V FL +A + L
Sbjct: 48 LYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQL 107
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ ++ R ++ P + +GN I +K
Sbjct: 108 NYSLIRNRPCRIMWSQRDPALRRTGQGN----------------------------IFIK 139
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL + F G +L + G V + A AA +
Sbjct: 140 NL---DAGIDNKALHDTFAAFGNILSCKVATSESGSLGYGFVHYETAEAADAAIKHV--- 193
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ K+ G + E + +
Sbjct: 194 -------------NGMLLNDKKVYVGHHIPRKERQAK----------------------- 217
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
+EE R T +Y KN++ + T++ + F K G I S + R +D KS G
Sbjct: 218 --IEESRARF----TNVYCKNVDADVTDEEFEKLFTKYGKITSCVLQRDEDGKSKG---- 267
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAK 682
+GFV F + A+ L +S ++ + R+ + E E + K+ +AK
Sbjct: 268 --FGFVNFENHDEAQTAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAK 325
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKN 739
G + ++NIP + + F FG + K +R P SG+ RGFGFV +
Sbjct: 326 FQGVNLYLKNIPESYDDERLRDEFAPFGAITSCKIMRAP-----SGVSRGFGFVCYSAPE 380
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
EA +A+ + L R L + A+ D
Sbjct: 381 EANKAVSEM-NGKMLDNRPLYVALAQRKD 408
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 118/301 (39%), Gaps = 41/301 (13%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQ 286
I +KNL AG+ K L F F + +C A +++ S
Sbjct: 136 IFIKNLDAGIDNKALHDTFA-----------------AFGNILSCKVATSESGSLG---- 174
Query: 287 LNIYKYSKDNSAKYSGAADDNNNASMENIK----AKHWKSQEDSVQFAEDIAESGRIFVR 342
Y + +A+ + AA + N + N K H +E + E A ++ +
Sbjct: 175 ---YGFVHYETAEAADAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEESRARFTNVYCK 231
Query: 343 NLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTV 402
N+ VT+++ KLF KYG + +L D E K+KGF V F + A A L +
Sbjct: 232 NVDADVTDEEFEKLFTKYGKITSCVLQRD-EDGKSKGFGFVNFENHDEAQTAVDELHDSD 290
Query: 403 FLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPT 462
F G+ L + + K + + KL F V + +KN+P
Sbjct: 291 FKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVN-------LYLKNIPESYDDE 343
Query: 463 DLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEW 517
L+ F PFG + +++ P G++ G V + +A A + + PLY+
Sbjct: 344 RLRDEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVAL 403
Query: 518 A 518
A
Sbjct: 404 A 404
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ ++ F G I S VA + S+GYGFV + T E+ +
Sbjct: 136 IFIKNLDAGIDNKALHDTFAAFGNILSCKVATSESG-------SLGYGFVHYETAEAADA 188
Query: 643 ALKVLQNSSLDEHQI----ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
A+K + L++ ++ + R R + E + + + + +N+
Sbjct: 189 AIKHVNGMLLNDKKVYVGHHIPRKERQAKIEESRARF----------TNVYCKNVDADVT 238
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
E E+LF +G++ L + G +GFGFV F +EA+ A+ L + G++
Sbjct: 239 DEEFEKLFTKYGKITSCVLQRDE--DGKSKGFGFVNFENHDEAQTAVDEL-HDSDFKGQK 295
Query: 759 LVLEWAEEADNVEDIRKRT 777
L + A++ E+ +R+
Sbjct: 296 LFVARAQKKSEREEELRRS 314
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 22/167 (13%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ L+ + TE + F GP+AS+ V R + S+GY +V F
Sbjct: 46 TSLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRR-----SLGYAYVNFLNAADG 100
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTG-SKILVRNIPFQAKQ 699
+A++ L S + + S R+ ++TG I ++N+
Sbjct: 101 ERAMEQLNYSLIRNRPCRIMWSQRD-------------PALRRTGQGNIFIKNLDAGIDN 147
Query: 700 SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+ + F AFG + ++ GS G+GFV + T A A+K
Sbjct: 148 KALHDTFAAFGNILSCKVATSESGS---LGYGFVHYETAEAADAAIK 191
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 15/191 (7%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P T+++ L++N + F +CG I S V ++ S G+GFV F + E
Sbjct: 37 PTKTIFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNTGR-----SRGFGFVTFASPE 91
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK----RKSSNVAKQTGSKILVRNIP 694
++++AL+ L +D I + +S +E + V+ R + + S++ V N+
Sbjct: 92 AVDKALE-LNGKEIDGRSINVDKS---VEKDQNQVRERRARTFGDAPSEPSSRLFVGNLS 147
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
F A + ++ E+F +G +K V +P SG +GFG+VEF AK+A ++L +
Sbjct: 148 FDATEEQLWEVFSDYGSIKSVHMPTSR-DSGRPKGFGYVEFEDIESAKKAHESLV-GQEI 205
Query: 755 YGRRLVLEWAE 765
GR + LE+++
Sbjct: 206 AGRAIRLEFSQ 216
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S R+FV NLS+ TE+ L ++F YG + V +P +++ + KGF V F E A +A+
Sbjct: 138 SSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFEDIESAKKAH 197
Query: 396 QHLDGTVFLGRMLHLIPGKP 415
+ L G GR + L +P
Sbjct: 198 ESLVGQEIAGRAIRLEFSQP 217
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 77/190 (40%), Gaps = 25/190 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IFV LS+ V L F + G + + D+ T +++GF VTF PE +A + L
Sbjct: 41 IFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNTGRSRGFGFVTFASPEAVDKALE-L 99
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKV---HCCISERKLDAFNQVVEARSKRIILVKNL 455
+G GR + NVD V + ER+ F S R + V NL
Sbjct: 100 NGKEIDGRSI------------NVDKSVEKDQNQVRERRARTFGDAPSEPSSR-LFVGNL 146
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAYTKF 508
+ L +F +G + V +P P G G VEF AK A SL +
Sbjct: 147 SFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGF-GYVEFEDIESAKKAHESLVGQEI 205
Query: 509 KEVPLYLEWA 518
+ LE++
Sbjct: 206 AGRAIRLEFS 215
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
EP + L++ NL+F++TE+ + F G I SV + +D P G+G+V+F
Sbjct: 136 EPSSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRP-----KGFGYVEFEDI 190
Query: 638 ESLNQALKVLQNSSLDEHQIELKRS 662
ES +A + L + I L+ S
Sbjct: 191 ESAKKAHESLVGQEIAGRAIRLEFS 215
>gi|18402769|ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|332194352|gb|AEE32473.1| poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 178/459 (38%), Gaps = 105/459 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L TVT+ L + F + G + V + D T ++ G+ V + P+ A++A L
Sbjct: 47 LYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 106
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ GR + ++ P K GN I +K
Sbjct: 107 NFMALNGRAIRVMYSVRDPSLRKSGVGN----------------------------IFIK 138
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
NL D KAL E F G +L K A +
Sbjct: 139 NLDKSI---DHKALHETFSAFGPIL----------------SCKVAVD------------ 167
Query: 514 YLEWAPEGVFAEAKEKSKGKE-KEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEED 572
P G +SKG + + +E +G +K D Q V ++ D
Sbjct: 168 -----PSG-------QSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRD 215
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
E T +Y+KNL+ + +++ + + F + G S + R + KS G+GFV
Sbjct: 216 PSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKS------KGFGFV 269
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT-----GSK 687
F + +A+ L + D+ + + ++ + E E T +K+K K+ GS
Sbjct: 270 NFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERE-TELKQKFEQSLKEAADKSQGSN 328
Query: 688 ILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ V+N+ ++ E F FG + K +R P SG+ RG GFV F T EA RA
Sbjct: 329 LYVKNLDESVTDDKLREHFAPFGTITSCKVMRDP-----SGVSRGSGFVAFSTPEEATRA 383
Query: 745 MKALCQSTHLYGRRLVLE--WAEEADNVEDIRKRTNRYF 781
+ T + G+ +V + + A ED + R F
Sbjct: 384 I------TEMNGKMIVTKPLYVALAQRKEDRKARLQAQF 416
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 163/439 (37%), Gaps = 120/439 (27%)
Query: 226 TIVVKNLPAGVKKKDL-KAYFKPLPLASVRTT-------FLGMAYIGFKDEKNCNKALNK 277
++ V +L A V L +A+ + + SVR LG Y+ + ++ ++ALN+
Sbjct: 46 SLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNE 105
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N G+ + + +D S + SG
Sbjct: 106 LNFMALNGRAIRVMYSVRDPSLRKSGV--------------------------------- 132
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G IF++NL ++ L + F +GP+ + +D + ++KG+ V + E A A
Sbjct: 133 GNIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDP-SGQSKGYGFVQYDTDEAAQGAID 191
Query: 397 HLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
L+G V++G +H + P S K+ N +
Sbjct: 192 KLNGMLLNDKQVYVGPFVHKLQRDP---------------SGEKVKFTN----------V 226
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAY 505
VKNL +L +F FG ++ G G V F + A A ++L
Sbjct: 227 YVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDALNG 286
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEV 565
F + KE GK ++K+E E E ++ ++ D QG
Sbjct: 287 KTFDD----------------KEWFVGKAQKKSERETELKQKFEQSLKEAADKSQG---- 326
Query: 566 EENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFL 625
+ LY+KNL+ + T+D +R HF G I S V R DP +
Sbjct: 327 ---------------SNLYVKNLDESVTDDKLREHFAPFGTITSCKVMR--DPSG----V 365
Query: 626 SMGYGFVQFYTRESLNQAL 644
S G GFV F T E +A+
Sbjct: 366 SRGSGFVAFSTPEEATRAI 384
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+ T+ + F + G + SV V R + S+GYG+V + T +
Sbjct: 45 TSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRR-----SLGYGYVNYATPQDA 99
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
++AL L +L+ I + S R+ ++ K I ++N+
Sbjct: 100 SRALNELNFMALNGRAIRVMYSVRD------------PSLRKSGVGNIFIKNLDKSIDHK 147
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ E F AFG + ++ + SG +G+GFV++ T A+ A+ L
Sbjct: 148 ALHETFSAFGPILSCKV--AVDPSGQSKGYGFVQYDTDEAAQGAIDKL 193
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
E S++ A D ++ ++V+NL +VT+D L + F +G + + D + ++G V
Sbjct: 314 EQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDP-SGVSRGSGFV 372
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
F PE AT+A ++G + + + L++ + KE+
Sbjct: 373 AFSTPEEATRAITEMNGKMIVTKPLYVALAQRKED 407
>gi|46111259|ref|XP_382687.1| hypothetical protein FG02511.1 [Gibberella zeae PH-1]
Length = 767
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 101/194 (52%), Gaps = 20/194 (10%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+L++++L +T +S+ F + P+ TV + K S GYGFV E
Sbjct: 43 SLFVRSLPPGATSESLTDFFSQHYPVKHATVVVDQKTKE-----SRGYGFVTLADAEDAV 97
Query: 642 QALKVLQNSSLDEHQIEL------KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+A K L + +I + +R+N E A ++++ Q +K+++RN+P+
Sbjct: 98 EAKKALDKQDWNGRRIRIDVAEPRQRNNTTGELPAHKIRKEEI----QRPNKLIIRNLPW 153
Query: 696 QAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
K++E +E LF+++G++KF LP+ G +GFGFV + A+RA++A+ +
Sbjct: 154 SIKKAEQLEHLFRSYGKVKFADLPQT---KGKLKGFGFVTLRGRPNAERALEAI-NGKEI 209
Query: 755 YGRRLVLEWAEEAD 768
GR L ++WA + D
Sbjct: 210 DGRTLAVDWAVDKD 223
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
S +FVRNL +T T++ L F +G + + +DK T+K G V F+ + A
Sbjct: 341 SSTVFVRNLPFTTTDEQLKGFFGHFGKIRYARVVMDKVTEKPAGTGFVCFIDADEA 396
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+Y+ L++N + ++ F+ CGPI V +D + S G+G++ F T E +
Sbjct: 360 VYVGGLSWNVDSEWLKSEFESCGPIVDARVITDRDTQK-----SKGFGYIDFETCEGAQK 414
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK-SSNVAKQTGSKILVRNIPFQAKQSE 701
A++ + LD +++ S E KR S + + V N+PF A Q
Sbjct: 415 AIETKNGTELDGRTLKVDLSAPRAERAPAENKRDFSKEELSAESTTLFVGNLPFSATQDS 474
Query: 702 VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM-KALCQSTHLYGRRLV 760
V E+F +G++ VRLP + +GFG+VEF T A+ A+ K + ++ R+
Sbjct: 475 VWEIFAEYGDVNSVRLPTDPETQRV-KGFGYVEFATLESARAAVEKGRGEGVYIDNRQAR 533
Query: 761 LEWAEEADN 769
L++++ N
Sbjct: 534 LDFSQPRSN 542
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V LS+ V + L FE GP+ + + D++T K+KGF + F E A +A +
Sbjct: 360 VYVGGLSWNVDSEWLKSEFESCGPIVDARVITDRDTQKSKGFGYIDFETCEGAQKAIETK 419
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+GT GR L + P + +E K D + + A S + V NLP+
Sbjct: 420 NGTELDGRTLKVDLSAP---------RAERAPAENKRDFSKEELSAES-TTLFVGNLPFS 469
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAF 500
+ +F +GD+ V +P T G VEF A+AA
Sbjct: 470 ATQDSVWEIFAEYGDVNSVRLPTDPETQRVKGFGYVEFATLESARAAV 517
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
AES +FV NL ++ T+D + ++F +YG + V LP D ET + KGF V F E A
Sbjct: 456 AESTTLFVGNLPFSATQDSVWEIFAEYGDVNSVRLPTDPETQRVKGFGYVEFATLESARA 515
Query: 394 AYQ--HLDGTVFLGRMLHLIPGKPKEN 418
A + +G R L +P+ N
Sbjct: 516 AVEKGRGEGVYIDNRQARLDFSQPRSN 542
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 102/188 (54%), Gaps = 13/188 (6%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++ NL++N E+ +RR F+ G ++ V + +++ S G+G+V++ S
Sbjct: 227 LFVGNLSWNVDEEWLRREFESFGELSGVRIMTERE-----TGRSRGFGYVEYADASSAKA 281
Query: 643 ALKVLQNSSLDEHQIEL---KRSNRNLESEATTVKRKSSNVAKQT---GSKILVRNIPFQ 696
A + +++ LD I L K + N ++ + ++ + QT + + V N+ F
Sbjct: 282 AYEAKKDTELDGRTINLDYAKPRDANSQAPREKAQTRARSFGDQTSPESNTLFVGNLVFG 341
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
++ V E+F+ G+++ VRLP +G +G+G+VEF + +EA++A+ L Q T + G
Sbjct: 342 VDENAVREVFEGQGQIQGVRLPTDAE-TGRPKGYGYVEFSSVDEARQALNEL-QGTDIGG 399
Query: 757 RRLVLEWA 764
R + L+++
Sbjct: 400 RAIRLDFS 407
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV NLS+ V E+ L + FE +G L+ V + ++ET +++GF V + A AY+
Sbjct: 227 LFVGNLSWNVDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADASSAKAAYEAK 286
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
T GR ++L KP+ + + + ++ + +F S + V NL +
Sbjct: 287 KDTELDGRTINLDYAKPR----DANSQAPREKAQTRARSFGDQTSPESN-TLFVGNLVFG 341
Query: 459 TLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAYTKFKEV 511
++ +FE G + V +P P G G VEF ++A+ A N L T
Sbjct: 342 VDENAVREVFEGQGQIQGVRLPTDAETGRPKGY-GYVEFSSVDEARQALNELQGTDIGGR 400
Query: 512 PLYLEWA---PEG 521
+ L+++ P+G
Sbjct: 401 AIRLDFSTPRPQG 413
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 18/154 (11%)
Query: 259 GMAYIGFKDEKNCNKALNKNK-SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G Y+ + D + A K + G+ +N+ Y+K A N +A
Sbjct: 267 GFGYVEYADASSAKAAYEAKKDTELDGRTINL-DYAKPRDA---------------NSQA 310
Query: 318 KHWKSQEDSVQFAEDIA-ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
K+Q + F + + ES +FV NL + V E+ + ++FE G + V LP D ET +
Sbjct: 311 PREKAQTRARSFGDQTSPESNTLFVGNLVFGVDENAVREVFEGQGQIQGVRLPTDAETGR 370
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
KG+ V F + A QA L GT GR + L
Sbjct: 371 PKGYGYVEFSSVDEARQALNELQGTDIGGRAIRL 404
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 82/216 (37%), Gaps = 44/216 (20%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG------LVEFLQKNQAKAAFNSL 503
+ V NL + L+ FE FG+L V + TG VE+ + AKAA+ +
Sbjct: 227 LFVGNLSWNVDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADASSAKAAYEAK 286
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
T+ + L++A K + + EK + A Q P
Sbjct: 287 KDTELDGRTINLDYA------------------KPRDANSQAPREKAQTRARSFGDQTSP 328
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E TL++ NL F E+++R F+ G I V + + P
Sbjct: 329 E---------------SNTLFVGNLVFGVDENAVREVFEGQGQIQGVRLPTDAETGRP-- 371
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
GYG+V+F + + QAL LQ + + I L
Sbjct: 372 ---KGYGYVEFSSVDEARQALNELQGTDIGGRAIRL 404
>gi|408391758|gb|EKJ71126.1| hypothetical protein FPSE_08632 [Fusarium pseudograminearum CS3096]
Length = 770
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 101/194 (52%), Gaps = 20/194 (10%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+L++++L +T +S+ F + P+ TV + K S GYGFV E
Sbjct: 43 SLFVRSLPPGATSESLTDFFSQHYPVKHATVVVDQKTKE-----SRGYGFVTLADAEDAV 97
Query: 642 QALKVLQNSSLDEHQIEL------KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+A K L + +I + +R+N E A ++++ Q +K+++RN+P+
Sbjct: 98 EAKKALDKQDWNGRRIRIDVAEPRQRNNTTGELPAHKIRKEEI----QRPNKLIIRNLPW 153
Query: 696 QAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
K++E +E LF+++G++KF LP+ G +GFGFV + A+RA++A+ +
Sbjct: 154 SIKKAEQLEHLFRSYGKVKFADLPQT---KGKLKGFGFVTLRGRPNAERALEAI-NGKEI 209
Query: 755 YGRRLVLEWAEEAD 768
GR L ++WA + D
Sbjct: 210 DGRTLAVDWAVDKD 223
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T + LT F ++ P+ + +D++T +++G+ VT E A +A + L
Sbjct: 44 LFVRSLPPGATSESLTDFFSQHYPVKHATVVVDQKTKESRGYGFVTLADAEDAVEAKKAL 103
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCC-ISERKLDAFNQVVEARSKRIILVKNLPY 457
D + GR + + +P++ N G++ I + ++ N+++ ++NLP+
Sbjct: 104 DKQDWNGRRIRIDVAEPRQRN-NTTGELPAHKIRKEEIQRPNKLI---------IRNLPW 153
Query: 458 RTLPTD-LKALFEPFG-----DLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEV 511
+ L+ LF +G DL + G G V + A+ A ++ +
Sbjct: 154 SIKKAEQLEHLFRSYGKVKFADLPQTKGKLKGF-GFVTLRGRPNAERALEAINGKEIDGR 212
Query: 512 PLYLEWA 518
L ++WA
Sbjct: 213 TLAVDWA 219
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
S +FVRNL +T T++ L F +G + + +DK T+K G V F+ + A
Sbjct: 338 SSTVFVRNLPFTTTDEQLKGFFGHFGKIRYARVVMDKVTEKPAGTGFVCFIDADEA 393
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
S + VRN+PF +++ F FG++++ R+ V + G GFV FI +EAK +
Sbjct: 339 STVFVRNLPFTTTDEQLKGFFGHFGKIRYARVVMDKV-TEKPAGTGFVCFIDADEAKSCI 397
Query: 746 KA 747
K
Sbjct: 398 KG 399
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 26/196 (13%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+ L++ NL++N E+ +R F+ G ++ V + +D S G+G+V+F E
Sbjct: 264 SNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRD-----SGRSRGFGYVEFTNAEDA 318
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLE-----SEATTVKRKSSNVAKQTGSK-------I 688
++A K +++ +D NL+ A + ++ + AK G + +
Sbjct: 319 SKAFKAKKDAEIDGR-------TINLDFANARQNAGGARDRAQSRAKSFGDQTSPESDTL 371
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ NI F A ++ V+E F + G + +RLP SG +GFG+V+F + +EA+ A AL
Sbjct: 372 FIGNISFNADENAVQETFSSHGSILGIRLPTDPE-SGRPKGFGYVQFSSVDEARSAFNAL 430
Query: 749 CQSTHLYGRRLVLEWA 764
Q T L GR + L+++
Sbjct: 431 -QGTELAGRAMRLDFS 445
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E AES +FV NLS+ V E+ L FE +G L+ V + D+++ +++GF V F E
Sbjct: 258 EASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAED 317
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
A++A++ GR ++L ++N G + + +F S +
Sbjct: 318 ASKAFKAKKDAEIDGRTINLDFANARQNAGGARDRAQS-----RAKSFGDQTSPESD-TL 371
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSL 503
+ N+ + ++ F G + + +P P G G V+F ++A++AFN+L
Sbjct: 372 FIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGF-GYVQFSSVDEARSAFNAL 430
Query: 504 AYTKFKEVPLYLEWA 518
T+ + L+++
Sbjct: 431 QGTELAGRAMRLDFS 445
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSF-WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G Y+ F + ++ +KA K G+ +N+ N+ + +G A D
Sbjct: 306 GFGYVEFTNAEDASKAFKAKKDAEIDGRTINLDFA---NARQNAGGARD----------- 351
Query: 318 KHWKSQEDSVQFAEDIA-ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
++Q + F + + ES +F+ N+S+ E+ + + F +G + + LP D E+ +
Sbjct: 352 ---RAQSRAKSFGDQTSPESDTLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGR 408
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
KGF V F + A A+ L GT GR + L P++N
Sbjct: 409 PKGFGYVQFSSVDEARSAFNALQGTELAGRAMRLDFSTPRQN 450
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 16/120 (13%)
Query: 671 TTVKRKSSN-------VAKQTG-------SKILVRNIPFQAKQSEVEELFKAFGELKFVR 716
T ++ S+ V K+T S + V N+ + + + F++FGEL VR
Sbjct: 235 TQKRKAESDETPVAKKVKKETADEASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGVR 294
Query: 717 LPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKR 776
+ SG RGFG+VEF +A +A KA + + GR + L++A N R R
Sbjct: 295 IVTDR-DSGRSRGFGYVEFTNAEDASKAFKA-KKDAEIDGRTINLDFANARQNAGGARDR 352
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 26/196 (13%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+ L++ NL++N E+ +R F+ G ++ V + +D S G+G+V+F E
Sbjct: 262 SNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRD-----SGRSRGFGYVEFTNAEDA 316
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLE-----SEATTVKRKSSNVAKQTGSK-------I 688
++A K +++ +D NL+ A + ++ + AK G + +
Sbjct: 317 SKAFKAKKDAEIDGR-------TINLDFANARQNAGGARDRAQSRAKSFGDQTSPESDTL 369
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ NI F A ++ V+E F + G + +RLP SG +GFG+V+F + +EA+ A AL
Sbjct: 370 FIGNISFNADENAVQETFSSHGSILGIRLPTDPE-SGRPKGFGYVQFSSVDEARSAFNAL 428
Query: 749 CQSTHLYGRRLVLEWA 764
Q T L GR + L+++
Sbjct: 429 -QGTELAGRAMRLDFS 443
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
E AES +FV NLS+ V E+ L FE +G L+ V + D+++ +++GF V F E
Sbjct: 256 EASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAED 315
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
A++A++ GR ++L ++N G + + +F S +
Sbjct: 316 ASKAFKAKKDAEIDGRTINLDFANARQNAGGARDRAQS-----RAKSFGDQTSPESD-TL 369
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSL 503
+ N+ + ++ F G + + +P P G G V+F ++A++AFN+L
Sbjct: 370 FIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGF-GYVQFSSVDEARSAFNAL 428
Query: 504 AYTKFKEVPLYLEWA 518
T+ + L+++
Sbjct: 429 QGTELAGRAMRLDFS 443
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSF-WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G Y+ F + ++ +KA K G+ +N+ N+ + +G A D
Sbjct: 304 GFGYVEFTNAEDASKAFKAKKDAEIDGRTINLDFA---NARQNAGGARD----------- 349
Query: 318 KHWKSQEDSVQFAEDIA-ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
++Q + F + + ES +F+ N+S+ E+ + + F +G + + LP D E+ +
Sbjct: 350 ---RAQSRAKSFGDQTSPESDTLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGR 406
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
KGF V F + A A+ L GT GR + L P++N
Sbjct: 407 PKGFGYVQFSSVDEARSAFNALQGTELAGRAMRLDFSTPRQN 448
>gi|224085256|ref|XP_002307525.1| predicted protein [Populus trichocarpa]
gi|222856974|gb|EEE94521.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 173/432 (40%), Gaps = 98/432 (22%)
Query: 334 AESGR-----IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP 388
AE+G+ ++V +L + V E L LF + + + + D+ + G+A V F P
Sbjct: 15 AEAGQFPNSSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNP 74
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
+ A A + L+ T G+ + ++ H S RK N
Sbjct: 75 QDAANAMELLNFTPLNGKAIRIMVS-------------HRDPSMRKSGHAN--------- 112
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAF 500
+ +KNL D KAL E F G VL + G V+F + A++A
Sbjct: 113 -VFIKNL---DTSIDNKALQETFASFGPVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAI 168
Query: 501 NSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQ 560
N L G+ KE G+ +E+ E T
Sbjct: 169 NRL----------------NGMLINDKEVFVGRFVR---------HQERIEAT------- 196
Query: 561 GVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
G P+ T +Y+KNL+ ++++ +++ F G I S V + + KS
Sbjct: 197 GSPKF---------------TNVYVKNLSETTSDEDLKKFFSNYGSITSAIVMKDQSGKS 241
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----K 676
G+GFV F + +S A++ L ++ ++ + R+ R E EA R +
Sbjct: 242 K------GFGFVNFQSPDSAAAAVEKLNGTTFNDKVWYVGRAQRKGEREAELKARFEQER 295
Query: 677 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
+S K + + ++N+ + +++ELF FG + ++ + GL +G GFV F
Sbjct: 296 NSRYEKLKAANLYLKNLDDKIDDEKLKELFSEFGSITSCKV--MLDQQGLSKGSGFVAFS 353
Query: 737 TKNEAKRAMKAL 748
T EA RA+ +
Sbjct: 354 TPEEASRALNGM 365
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 134/316 (42%), Gaps = 56/316 (17%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTF------LGMAYIGFKDEKNC 271
+ K + + +KNL + K L+ F P+ S + G ++ F++E+
Sbjct: 105 MRKSGHANVFIKNLDTSIDNKALQETFASFGPVLSCKVAVDNNGQSKGYGFVQFENEEAA 164
Query: 272 NKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA 330
A+N+ N K++ + ++ + E I+A S +F
Sbjct: 165 QSAINRLNGMLINDKEVFVGRFVRHQ----------------ERIEAT------GSPKFT 202
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
++V+NLS T +++DL K F YG + I+ D ++ K+KGF V F P+
Sbjct: 203 N-------VYVKNLSETTSDEDLKKFFSNYGSITSAIVMKD-QSGKSKGFGFVNFQSPDS 254
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK-ENEGNVDGKVHCCISER--KLDAFNQVVEARSK 447
A A + L+GT F ++ ++ + K E E + + + R KL A N
Sbjct: 255 AAAAVEKLNGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKAAN-------- 306
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNS 502
+ +KNL + LK LF FG + +V++ G+ +G V F +A A N
Sbjct: 307 --LYLKNLDDKIDDEKLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALNG 364
Query: 503 LAYTKFKEVPLYLEWA 518
+ + PLY+ A
Sbjct: 365 MNGKMIGKKPLYVAVA 380
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 156/431 (36%), Gaps = 116/431 (26%)
Query: 254 RTTFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASM 312
R LG AY+ F + ++ A+ N + GK + I +D S + SG A+
Sbjct: 60 RRASLGYAYVNFSNPQDAANAMELLNFTPLNGKAIRIMVSHRDPSMRKSGHAN------- 112
Query: 313 ENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDK 372
+F++NL ++ L + F +GP+ + +D
Sbjct: 113 --------------------------VFIKNLDTSIDNKALQETFASFGPVLSCKVAVDN 146
Query: 373 ETDKTKGFALVTFLMPEHATQAYQHLDGT------VFLGRMLHLIPGKPKENEGNVDGKV 426
++KG+ V F E A A L+G VF+GR + + E ++
Sbjct: 147 -NGQSKGYGFVQFENEEAAQSAINRLNGMLINDKEVFVGRFV-------RHQE-----RI 193
Query: 427 HCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV------P 480
S + + + VKNL T DLK F +G + +V
Sbjct: 194 EATGSPKFTNVY-------------VKNLSETTSDEDLKKFFSNYGSITSAIVMKDQSGK 240
Query: 481 PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
G G V F + A AA L T F + Y+ G+ + K E
Sbjct: 241 SKGF-GFVNFQSPDSAAAAVEKLNGTTFNDKVWYV----------------GRAQRKGER 283
Query: 541 EGE-EGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRR 599
E E + E++ N+ E + LY+KNL+ ++ ++
Sbjct: 284 EAELKARFEQERNSRYEKLKA--------------------ANLYLKNLDDKIDDEKLKE 323
Query: 600 HFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
F + G I S V + Q LS G GFV F T E ++AL + + + + +
Sbjct: 324 LFSEFGSITSCKVMLDQ------QGLSKGSGFVAFSTPEEASRALNGMNGKMIGKKPLYV 377
Query: 660 KRSNRNLESEA 670
+ R E +A
Sbjct: 378 AVAQRREERKA 388
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 16/170 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + +++ F GP+ S VA + GQ S GYGFVQF E+
Sbjct: 113 VFIKNLDTSIDNKALQETFASFGPVLSCKVAVDNN----GQ--SKGYGFVQFENEEAAQS 166
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A+ L +++ ++ + R R+ E T K +NV V+N+ ++
Sbjct: 167 AINRLNGMLINDKEVFVGRFVRHQERIEATGSPKFTNV--------YVKNLSETTSDEDL 218
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
++ F +G + + K SG +GFGFV F + + A A++ L +T
Sbjct: 219 KKFFSNYGSITSAIVMKDQ--SGKSKGFGFVNFQSPDSAAAAVEKLNGTT 266
>gi|169773975|ref|XP_001821456.1| ribosome biogenesis (Nop4) [Aspergillus oryzae RIB40]
gi|83769317|dbj|BAE59454.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391869076|gb|EIT78281.1| nucleolar protein fibrillarin NOP77 [Aspergillus oryzae 3.042]
Length = 726
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 161/352 (45%), Gaps = 38/352 (10%)
Query: 313 ENIKAKHWKSQEDSVQFAEDIAESGR--IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPI 370
E ++A ++ D+VQ E +++ R +FVR+L +VT + L + F + + ++
Sbjct: 20 EEVEAAMDTAKNDTVQ-EESVSDKPRRTLFVRSLPASVTTEKLVEYFSQSYVIKHALVVN 78
Query: 371 DKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCI 430
D ET ++KG+ VTF + A A +G+VF G+ + + +P+ VD +
Sbjct: 79 DSETKQSKGYGFVTFADVDDAKAALDEFNGSVFDGKKIKVDYAQPRHR--TVDENAGKSV 136
Query: 431 -SERKLDAFNQVVEARSKRI---ILVKNLPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT 485
S L+A Q + R+ ++V+NLP+ P DL F FG + V +P G
Sbjct: 137 PSSAALEAKKQREQERAATQPPKLIVRNLPWSIKEPDDLAVHFRSFGKIKYVNLPKKGNK 196
Query: 486 ----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPE-GVFAEAKEKSKGKEKEKNEE 540
G V K A+ A ++ + L ++WA + V+ ++ S+ + + EE
Sbjct: 197 LAGFGFVVLRGKKNAEKALEAVNGKEVDGRTLAVDWAVDKAVWENIQQDSQEQGNGEEEE 256
Query: 541 EGEEGEEEKKENTAEEDNQQGVPEVEENVEE-----------------DEEREPEPDTTL 583
+ + E + D+ +PE +E+++E +E+ + T+
Sbjct: 257 SSDAEMADDAEAESGVDDDGDLPE-DEDMDEIAQSDEDEDEEEEEEEEEEKEDERTAATV 315
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
+I+NL F T++++ HF + GP+ + + + P G GFV F+
Sbjct: 316 FIRNLPFTCTDETLYEHFTQFGPLRYARIVVDPETERP-----RGTGFVCFW 362
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 34/251 (13%)
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIR 598
E G E E +TA+ D Q EE+V + +P TL++++L + T + +
Sbjct: 14 EGRGNSEEVEAAMDTAKNDTVQ-----EESVSD------KPRRTLFVRSLPASVTTEKLV 62
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
+F + I V + K S GYGFV F + AL S D +I+
Sbjct: 63 EYFSQSYVIKHALVVNDSETKQ-----SKGYGFVTFADVDDAKAALDEFNGSVFDGKKIK 117
Query: 659 L-----------KRSNRNLESEAT--TVKRKSSNVAKQTGSKILVRNIPFQAKQ-SEVEE 704
+ + + +++ S A K++ A K++VRN+P+ K+ ++
Sbjct: 118 VDYAQPRHRTVDENAGKSVPSSAALEAKKQREQERAATQPPKLIVRNLPWSIKEPDDLAV 177
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
F++FG++K+V LPKK G+ L GFGFV K A++A++A+ + GR L ++WA
Sbjct: 178 HFRSFGKIKYVNLPKK--GNKLA-GFGFVVLRGKKNAEKALEAV-NGKEVDGRTLAVDWA 233
Query: 765 EEADNVEDIRK 775
+ E+I++
Sbjct: 234 VDKAVWENIQQ 244
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 203 DTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK-------PLPLASVRT 255
DTA +D V + V + T+ V++LPA V + L YF L + T
Sbjct: 27 DTAKNDT----VQEESVSDKPRRTLFVRSLPASVTTEKLVEYFSQSYVIKHALVVNDSET 82
Query: 256 -TFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASME 313
G ++ F D + AL++ N S + GK++ + D + D+N S+
Sbjct: 83 KQSKGYGFVTFADVDDAKAALDEFNGSVFDGKKIKV-----DYAQPRHRTVDENAGKSVP 137
Query: 314 NIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDK 372
+ A K Q + + A + ++ VRNL +++ E DDL F +G + V LP K
Sbjct: 138 SSAALEAKKQREQERAA---TQPPKLIVRNLPWSIKEPDDLAVHFRSFGKIKYVNLP--K 192
Query: 373 ETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+ +K GF V ++A +A + ++G GR L +
Sbjct: 193 KGNKLAGFGFVVLRGKKNAEKALEAVNGKEVDGRTLAV 230
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 43/209 (20%)
Query: 227 IVVKNLPAGVKK-KDLKAYFKP------LPLASVRTTFLGMAYIGFKDEKNCNKALNK-- 277
++V+NLP +K+ DL +F+ + L G ++ + +KN KAL
Sbjct: 160 LIVRNLPWSIKEPDDLAVHFRSFGKIKYVNLPKKGNKLAGFGFVVLRGKKNAEKALEAVN 219
Query: 278 ---------------NKSFWKGKQLNIYKYSK------------DNSAKYSGAADDNN-- 308
+K+ W+ Q + + D++ SG DD +
Sbjct: 220 GKEVDGRTLAVDWAVDKAVWENIQQDSQEQGNGEEEESSDAEMADDAEAESGVDDDGDLP 279
Query: 309 -NASMENIKAKHWKSQEDSVQFAEDIAESGR----IFVRNLSYTVTEDDLTKLFEKYGPL 363
+ M+ I E+ + E+ E R +F+RNL +T T++ L + F ++GPL
Sbjct: 280 EDEDMDEIAQSDEDEDEEEEEEEEEEKEDERTAATVFIRNLPFTCTDETLYEHFTQFGPL 339
Query: 364 AEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ +D ET++ +G V F E A
Sbjct: 340 RYARIVVDPETERPRGTGFVCFWKVEDAA 368
>gi|406864898|gb|EKD17941.1| RNA recognition domain-containing protein-containing protein
[Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 810
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T D LT+LF + PL + +D ET ++KG+ VT E A +A +
Sbjct: 48 LFVRSLPAIATSDKLTELFSQDYPLKHATVVLDPETKQSKGYGFVTLADAEDAQRALEEF 107
Query: 399 DGTVFLGRMLHLIPGKPKENE----GNVDGKVHCCISER----KLDAFNQVVEARSKRII 450
+G F+GR + + +P+ E ++GK IS K + Q+ E + +
Sbjct: 108 NGKTFMGRKMKIEIAQPRSREMADGKGLEGKRKSTISAEAARIKKERLEQMAEEKKPPKL 167
Query: 451 LVKNLPYRT-LPTDLKALFEPFGDLGRVLVP-PYGIT----GLVEFLQKNQAKAAFNSLA 504
+++NLP+ P L +F+ FG + ++P G T G + K A A ++
Sbjct: 168 IIRNLPWSVNTPEKLAEIFKKFGKVKFSVLPKKKGDTQAGFGFITMRGKKNADKALAAIN 227
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEG 542
T L ++WA E E ++ + E E E++G
Sbjct: 228 GTLVDGRILAVDWAVEKSVWETQQGA-ANEGETVEDDG 264
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 28/220 (12%)
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
E E D + TL++++L +T D + F + P+ TV DP++ S
Sbjct: 32 ERAESDSLPNAQAKRTLFVRSLPAIATSDKLTELFSQDYPLKHATVVL--DPETK---QS 86
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK----RSNRNLESEATTVKRKSSNVAK 682
GYGFV E +AL+ + +++++ RS + + KRKS+ A+
Sbjct: 87 KGYGFVTLADAEDAQRALEEFNGKTFMGRKMKIEIAQPRSREMADGKGLEGKRKSTISAE 146
Query: 683 ---------------QTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGL 726
+ K+++RN+P+ E + E+FK FG++KF LPKK
Sbjct: 147 AARIKKERLEQMAEEKKPPKLIIRNLPWSVNTPEKLAEIFKKFGKVKFSVLPKKK--GDT 204
Query: 727 HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
GFGF+ K A +A+ A+ T + GR L ++WA E
Sbjct: 205 QAGFGFITMRGKKNADKALAAI-NGTLVDGRILAVDWAVE 243
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF 385
+F+RNL +TV + +L + FE++GP+ + +D+ TD+ +G V F
Sbjct: 356 LFIRNLPFTVRDAELKEHFEQFGPVRYARVVMDRATDRPRGTGFVCF 402
>gi|302785327|ref|XP_002974435.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
gi|300158033|gb|EFJ24657.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
Length = 642
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 167/428 (39%), Gaps = 99/428 (23%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V +L VTE L +F + P+ + + D + ++ G+A V + + A++A
Sbjct: 36 STSLYVGDLDPNVTEGQLYDVFNQVAPVLSIRVCRDLISKRSLGYAYVNYNTGQDASRAL 95
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ L+ L+ GKP + S R + + I +KNL
Sbjct: 96 EMLN--------FSLVNGKP----------IRIMFSHR-----DPSIRKSGMANIFIKNL 132
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTK 507
D KAL++ F G +L + G V+F Q++ A++A +
Sbjct: 133 DKSI---DNKALYDTFAQFGNILSCKVAVDSSGQSRGYGFVQFEQEDAAQSAIKQVNGML 189
Query: 508 FKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEE 567
E +++ G F +E+ D GV +
Sbjct: 190 LIEKQVFV-----GPFVRRQER---------------------------DLTGGVTKF-- 215
Query: 568 NVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSM 627
+Y+KNL +T+D ++R F + GPI+S V R + K S
Sbjct: 216 -------------NNVYVKNLGDATTDDDLKRVFGEFGPISSAVVMRDPEGK------SK 256
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQ 683
+GFV F + A++ L +D+ + + R+ + E EA R + K
Sbjct: 257 CFGFVNFENADDAALAVEELNGKKMDDKEWYVGRAQKKSEREAELRARYDQERKERSDKY 316
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNE 740
G + ++N+ ++ ELF FG + K +R P+ G +G GFV F T E
Sbjct: 317 QGVNLYLKNLDDTIDDDKLRELFHGFGTIISCKVMRDPQ-----GHSKGSGFVAFSTTEE 371
Query: 741 AKRAMKAL 748
A RAM +
Sbjct: 372 ANRAMTEM 379
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 163/433 (37%), Gaps = 108/433 (24%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------FLGMAYIGFKDEKNCNKALNK 277
++ V +L V + L F + P+ S+R LG AY+ + ++ ++AL
Sbjct: 38 SLYVGDLDPNVTEGQLYDVFNQVAPVLSIRVCRDLISKRSLGYAYVNYNTGQDASRALEM 97
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N S GK + I +D S + SG A+
Sbjct: 98 LNFSLVNGKPIRIMFSHRDPSIRKSGMAN------------------------------- 126
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
IF++NL ++ L F ++G + + +D + +++G+ V F + A A +
Sbjct: 127 --IFIKNLDKSIDNKALYDTFAQFGNILSCKVAVD-SSGQSRGYGFVQFEQEDAAQSAIK 183
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
++G + + + + + P + E ++ G V FN V VKNL
Sbjct: 184 QVNGMLLIEKQVFVGPFV-RRQERDLTGGV---------TKFNNV---------YVKNLG 224
Query: 457 YRTLPTDLKALFEPFGDLGRVLV--PPYG---ITGLVEFLQKNQAKAAFNSLAYTKFKEV 511
T DLK +F FG + +V P G G V F + A A L K +
Sbjct: 225 DATTDDDLKRVFGEFGPISSAVVMRDPEGKSKCFGFVNFENADDAALAVEELNGKKMDD- 283
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
KE G+ ++K+E E E +E D QGV
Sbjct: 284 ---------------KEWYVGRAQKKSEREAELRARYDQERKERSDKYQGV--------- 319
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
LY+KNL+ +D +R F G I S V R DP Q S G GF
Sbjct: 320 ----------NLYLKNLDDTIDDDKLRELFHGFGTIISCKVMR--DP----QGHSKGSGF 363
Query: 632 VQFYTRESLNQAL 644
V F T E N+A+
Sbjct: 364 VAFSTTEEANRAM 376
>gi|440473347|gb|ELQ42150.1| nucleolar protein 4 [Magnaporthe oryzae Y34]
gi|440489430|gb|ELQ69086.1| nucleolar protein 4 [Magnaporthe oryzae P131]
Length = 759
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 151/376 (40%), Gaps = 67/376 (17%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ E +FVR+L + T + LT+LF ++ P+ + +D++T +G+ VTF E A
Sbjct: 42 VEERRSLFVRSLPPSATSETLTELFSQHFPVKHATVVLDQKTKTPRGYGFVTFTDAEDAL 101
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRIIL 451
QA + LD + GR L L +P+ G V ++ K + E R ++
Sbjct: 102 QAKEKLDNHLIEGRRLRLEIAEPRHRAATKAGVAVDTPLAAEKRKREEEEAEGRKPPKLI 161
Query: 452 VKNLPYRTLPTD-LKALFEPFGDLGRVLVP----PYGITGLVEFLQKNQAKAAFNSLAYT 506
++NLP+ D L ALF+ +G + +P G V K A+ A L
Sbjct: 162 IRNLPWSIKTKDQLSALFQSYGKVRFSDLPNSKGKLSGFGFVTLRGKKNAEKAIEGLNGK 221
Query: 507 KFKEVPLYLEWAPE-----------------------GVFAEAKEK---SKGKEKEKNEE 540
+ + ++WA + V AEAK K + K K K +
Sbjct: 222 EVDGRTIAVDWAVDKATWEKQQQNEDDSDTPKKTKMKKVDAEAKSKADQASTKTKPKGND 281
Query: 541 EGEEGEEEKKENTAEEDNQQGVPEVEE-------------------------NVEEDEER 575
+ +E E+ K + DN + E +E NV +DEE
Sbjct: 282 DFDEDEDLKNFFANQGDNLEDEDESDEDDDEDKKSEDADEEDEDEDEEEGGANVNDDEET 341
Query: 576 EPEPDT-----TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
+ P T TL+I+NL F +T++ ++ HF G + V + S G G
Sbjct: 342 KKTPQTTDNSNTLFIRNLPFTTTDEQLKEHFTHFGAVRYARVVMDHATQK-----SAGKG 396
Query: 631 FVQFYTRESLNQALKV 646
FV F+ E L+
Sbjct: 397 FVCFFNAEDAESCLRA 412
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 109/253 (43%), Gaps = 50/253 (19%)
Query: 536 EKNEEEGEEGEEEKKENTAE--EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNST 593
+K E E +E+ + AE N P + VEE +L++++L ++T
Sbjct: 7 QKRRREAEAIQEQAIASAAEVPGTNAAAPPTKKARVEERR--------SLFVRSLPPSAT 58
Query: 594 EDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLD 653
+++ F + P+ TV + K+P GYGFV F E QA LD
Sbjct: 59 SETLTELFSQHFPVKHATVVLDQKTKTP-----RGYGFVTFTDAEDALQA-----KEKLD 108
Query: 654 EHQIELKRSNRNLESEATTVKRKSSNVA---------------------KQTGSKILVRN 692
H IE R L E + +++ A + K+++RN
Sbjct: 109 NHLIE----GRRLRLEIAEPRHRAATKAGVAVDTPLAAEKRKREEEEAEGRKPPKLIIRN 164
Query: 693 IPFQAK-QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
+P+ K + ++ LF+++G+++F LP G GFGFV K A++A++ L
Sbjct: 165 LPWSIKTKDQLSALFQSYGKVRFSDLPN---SKGKLSGFGFVTLRGKKNAEKAIEGL-NG 220
Query: 752 THLYGRRLVLEWA 764
+ GR + ++WA
Sbjct: 221 KEVDGRTIAVDWA 233
>gi|428203936|ref|YP_007082525.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981368|gb|AFY78968.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 97
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IFV NLSY VT+ DL +F +YG + V +P D+ET + +GFA V T A + L
Sbjct: 3 IFVGNLSYEVTQADLNSVFAEYGSVKRVHIPTDRETGRMRGFAFVEMETAAEETSAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISER 433
DG + GR + + KP+EN G+ +G+ + S+R
Sbjct: 63 DGAEWYGREMKVNQAKPRENNGD-NGRSNSNYSKR 96
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ ++ Q+++ +F +G +K V +P +G RGF FVE T E A++A
Sbjct: 3 IFVGNLSYEVTQADLNSVFAEYGSVKRVHIPTDRE-TGRMRGFAFVEMETAAEETSAIEA 61
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRY 780
L YGR + + A+ +N D + + Y
Sbjct: 62 L-DGAEWYGREMKVNQAKPRENNGDNGRSNSNY 93
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 173/445 (38%), Gaps = 92/445 (20%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V +L +V+E L +F G ++ + + D T + G+A V F E +A
Sbjct: 39 SASLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKKAI 98
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ L+ T GR+ ++ S+R + + + I +KNL
Sbjct: 99 EKLNYTPIKGRLCRIM------------------WSQR-----DPALRKKGSANIFIKNL 135
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTK 507
D KAL++ F G +L G V F AK A ++L
Sbjct: 136 ---HSDIDNKALYDTFSVFGNILSSKIATDETGKSKGFGFVHFEDDTAAKEAIDAL---- 188
Query: 508 FKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEE 567
G+ +E G + E + + EE K N
Sbjct: 189 ------------NGMLLNGQEIFVGPHLSRKERDSQL--EESKANF-------------- 220
Query: 568 NVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSM 627
T +Y+KN+N +T++ F K G + S + + +D K
Sbjct: 221 -------------TNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGKLK------ 261
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN----VAKQ 683
G+GFV F E +A++ L S + ++ + R+ + E K+ ++ +AK
Sbjct: 262 GFGFVDFENHEDAAKAVEELNGSQFKDQELFVSRAQKKYERMQELKKQYEASRLEKMAKY 321
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
G + ++N+ +++E F +G + VR+ + +G RGFGFV F T EA +
Sbjct: 322 QGVNLFIKNLDDSIDDEKLKEEFAPYGNITSVRVMR--TENGKSRGFGFVCFSTPEEATK 379
Query: 744 AMKALCQSTHLYGRRLVLEWAEEAD 768
A+ Q + G+ L + A+ D
Sbjct: 380 AITEKNQQI-VAGKPLYVAIAQRKD 403
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 178/464 (38%), Gaps = 120/464 (25%)
Query: 199 TKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRT-- 255
++ + TA S PS + ++ V +L V + L F P+ ++S+R
Sbjct: 20 SQEQQTATSTPSSATTENSSA------SLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCR 73
Query: 256 -----TFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNN 309
T LG AY+ F D + KA+ K N + KG+ I +D + + G+A+
Sbjct: 74 DAITKTSLGYAYVNFNDHEAGKKAIEKLNYTPIKGRLCRIMWSQRDPALRKKGSAN---- 129
Query: 310 ASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILP 369
IF++NL + L F +G + +
Sbjct: 130 -----------------------------IFIKNLHSDIDNKALYDTFSVFGNILSSKIA 160
Query: 370 IDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCC 429
D ET K+KGF V F A +A L+G + G+ + + P H
Sbjct: 161 TD-ETGKSKGFGFVHFEDDTAAKEAIDALNGMLLNGQEIFVGP--------------HLS 205
Query: 430 ISERKLDAFNQVVEARSKRI-ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--- 485
ER +Q+ E+++ I VKN+ T + LF + G+VL T
Sbjct: 206 RKERD----SQLEESKANFTNIYVKNINLETTDEEFTELFSKY---GKVLSAALEKTEDG 258
Query: 486 -----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
G V+F A A L ++FK+ L++ A K+ E+ +E
Sbjct: 259 KLKGFGFVDFENHEDAAKAVEELNGSQFKDQELFVSRAQ-------------KKYERMQE 305
Query: 541 EGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRH 600
++ E + E A+ QGV L+IKNL+ + ++ ++
Sbjct: 306 LKKQYEASRLEKMAK---YQGV-------------------NLFIKNLDDSIDDEKLKEE 343
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
F G I SV V R ++ K S G+GFV F T E +A+
Sbjct: 344 FAPYGNITSVRVMRTENGK------SRGFGFVCFSTPEEATKAI 381
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 48/269 (17%)
Query: 259 GMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G ++ F++ ++ KA+ + N S +K ++L + + K KY M+ +K
Sbjct: 262 GFGFVDFENHEDAAKAVEELNGSQFKDQELFVSRAQK----KYE---------RMQELKK 308
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
++ S+ + + + + +F++NL ++ ++ L + F YG + V + + E K+
Sbjct: 309 QYEASRLEKMAKYQGV----NLFIKNLDDSIDDEKLKEEFAPYGNITSVRV-MRTENGKS 363
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERK--- 434
+GF V F PE AT+A + ++ GKP ++ I++RK
Sbjct: 364 RGFGFVCFSTPEEATKAITE--------KNQQIVAGKP----------LYVAIAQRKDVR 405
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKN 494
Q ++AR++ + F P G ++PP G V F N
Sbjct: 406 RSQLAQQIQARNQMRYQQATAAAAAAAAGIPGQFMPPMFYG--VMPPRG----VPFNGPN 459
Query: 495 QAKAAFNSLAYTKFKEVPLYLEWAPEGVF 523
+ N + +F+ P+Y P+G F
Sbjct: 460 PQQ--MNGVPPQQFRNAPVYGGMPPQGAF 486
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 180/440 (40%), Gaps = 95/440 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +V E L LF + P+ V + D T ++ G+A V F PE A++A L
Sbjct: 60 LYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRDL-TRRSLGYAYVNFANPEDASRAMDSL 118
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ R + ++ +S R + K + +KNL
Sbjct: 119 NYAPIRDRPIRIM------------------LSNR-----DPSTRLSGKGNVFIKNL--- 152
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL+E F G +L + G V+F ++ A+AA + L +
Sbjct: 153 DPSIDNKALYETFSAFGTILSCKVAMDAVGRSKGYGFVQFEKEETAQAAIDKLNGMLLND 212
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+++ G F +++S+ E G VP
Sbjct: 213 KQVFV-----GHFVRRQDRSR-------SESG------------------AVPRF----- 237
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
T +Y+KNL T+D +++ F K G I+S V + + S +G
Sbjct: 238 ----------TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN------SRSFG 281
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGS 686
FV F + E+ A++ + SL E + + R+ + E E ++ + S K GS
Sbjct: 282 FVNFESPEAAAVAVEKMNGISLGEDVLYVGRAQKKSEREEELRRKFEQERISRFEKLQGS 341
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+ ++N+ +++E+F +G + ++ M GL RGFGFV + + EA RA+
Sbjct: 342 NLYLKNLDDSVNDEKLKEMFSEYGNVTSCKV--MMNSQGLSRGFGFVAYSSPEEASRALS 399
Query: 747 ALCQSTHLYGRR-LVLEWAE 765
+ + + GR+ L + +A+
Sbjct: 400 EM--NGKMIGRKPLYVAFAQ 417
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P+++LY+ +L+ + E + F + P+ +V V R +S +GY +V F E
Sbjct: 56 PNSSLYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRDLTRRS------LGYAYVNFANPE 109
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
++A+ L + + + I + SNR+ +T + K + + ++N+
Sbjct: 110 DASRAMDSLNYAPIRDRPIRIMLSNRD---PSTRLSGKGN---------VFIKNLDPSID 157
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ E F AFG + ++ VG +G+GFV+F + A+ A+ L
Sbjct: 158 NKALYETFSAFGTILSCKVAMDAVGRS--KGYGFVQFEKEETAQAAIDKL 205
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 120/278 (43%), Gaps = 47/278 (16%)
Query: 262 YIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK---AK 318
+ F +C A++ + + K ++ K+ +A+ AA D N + N K
Sbjct: 165 FSAFGTILSCKVAMD---AVGRSKGYGFVQFEKEETAQ---AAIDKLNGMLLNDKQVFVG 218
Query: 319 HWKSQEDSVQFAEDIAESG------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDK 372
H+ ++D + +ESG ++V+NL +T+D+L K F KYG ++ ++ +
Sbjct: 219 HFVRRQDRSR-----SESGAVPRFTNVYVKNLPKEITDDELKKTFGKYGDISSAVV-MKD 272
Query: 373 ETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISE 432
++ ++ F V F PE A A + ++G +L++ G K SE
Sbjct: 273 QSGNSRSFGFVNFESPEAAAVAVEKMNGISLGEDVLYV---------GRAQKK-----SE 318
Query: 433 RKLDAFNQVVEARSKRI-------ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYG 483
R+ + + + R R + +KNL LK +F +G++ +V++ G
Sbjct: 319 REEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQG 378
Query: 484 IT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
++ G V + +A A + + PLY+ +A
Sbjct: 379 LSRGFGFVAYSSPEEASRALSEMNGKMIGRKPLYVAFA 416
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 171/436 (39%), Gaps = 89/436 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +V E+ L ++F K G L V + D T + + V +L A A + L
Sbjct: 40 LYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEKL 99
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ ++ L D + S R DA V + VKNL
Sbjct: 100 NHSLIL------------------DKPIRVMWSNRDPDARRSGVGN-----VFVKNLNDL 136
Query: 459 TLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
L+ LF FGD+ +V G + G V+F + A A+ +L + F L
Sbjct: 137 VDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLNNSHFCGRQL 196
Query: 514 YLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDE 573
++ F + E+S + +
Sbjct: 197 HV-----ATFIKKSERSTNNDDKY------------------------------------ 215
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
T LY+KNL+ + TE+ I+ F + G + SV + ++ D S G+GFV
Sbjct: 216 -------TNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSK------GFGFVS 262
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES----EATTVKRKSSNVAKQTGSKIL 689
F ES +A + + L + + R+ + E + ++++ + K GS +
Sbjct: 263 FQNPESAKRAKESMNGMLLGSKTLYVARAQKKAERKQYLQCLHEEKRNEIITKSNGSNVY 322
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
++NI + + E F FG + ++ + G+ +GFGFV + T EAK A+ +
Sbjct: 323 IKNINDEVGDDALRERFNEFGNITSAKIMRD--EKGISKGFGFVCYNTPEEAKCAVSNM- 379
Query: 750 QSTHLYGRRLVLEWAE 765
+ YG+ L + A+
Sbjct: 380 RGVMFYGKPLYVAIAQ 395
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
LY+ +L+ + E+ + F K G + SV V R + S+ YG+V + ++
Sbjct: 39 ALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSN-----SLRYGYVNYLSQADAA 93
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE 701
AL+ L +S + + I + SNR+ ++ + V + V+N+
Sbjct: 94 IALEKLNHSLILDKPIRVMWSNRDPDARRSGV------------GNVFVKNLNDLVDNVS 141
Query: 702 VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL-- 759
++ELF FG++ ++ K G+ RG+GFV+F + A +++ L ++H GR+L
Sbjct: 142 LQELFCKFGDILSCKVAKNEDGTS--RGYGFVQFALQESADASIQNL-NNSHFCGRQLHV 198
Query: 760 --VLEWAEEADNVEDIRKRTNRYF 781
++ +E + N +D K TN Y
Sbjct: 199 ATFIKKSERSTNNDD--KYTNLYM 220
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQAY 395
G +FV+NL+ V L +LF K+G + + K D T +G+ V F + E A +
Sbjct: 126 GNVFVKNLNDLVDNVSLQELFCKFGDILSC--KVAKNEDGTSRGYGFVQFALQESADASI 183
Query: 396 QHLDGTVFLGRMLHL 410
Q+L+ + F GR LH+
Sbjct: 184 QNLNNSHFCGRQLHV 198
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++++N++ V +D L + F ++G + + D E +KGF V + PE A A ++
Sbjct: 321 VYIKNINDEVGDDALRERFNEFGNITSAKIMRD-EKGISKGFGFVCYNTPEEAKCAVSNM 379
Query: 399 DGTVFLGRMLHLIPGKPKE 417
G +F G+ L++ + KE
Sbjct: 380 RGVMFYGKPLYVAIAQRKE 398
>gi|426360413|ref|XP_004047438.1| PREDICTED: polyadenylate-binding protein 1 [Gorilla gorilla
gorilla]
Length = 682
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 170/450 (37%), Gaps = 104/450 (23%)
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G IF++NL ++ L F +G + + D+ + +KG+ V F E A +A +
Sbjct: 28 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIE 85
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFN-QVVEARSKRI------ 449
++G + N+D + +ER LD N V++ + RI
Sbjct: 86 KMNGMLL---------NXXXXEASNIDSENVFPAAERALDTMNFDVIKGKPVRIMWSQRD 136
Query: 450 ----------ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQ 492
I +KNL D KAL++ F G +L G V F
Sbjct: 137 PSLRKSGVGNIFIKNLDKSI---DNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFET 193
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
+ A+ A + G+ ++ G+ K + E E E G K+
Sbjct: 194 QEAAERAIEKM----------------NGMLLNDRKVFVGRFKSRKEREAELGARAKEF- 236
Query: 553 TAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
T +YIKN + ++ ++ F K GP SV V
Sbjct: 237 ----------------------------TNVYIKNFGEDMDDERLKDLFGKFGPALSVKV 268
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
+ K S G+GFV F E +A+ + L+ QI + R+ + +E + T
Sbjct: 269 MTDESGK------SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TE 321
Query: 673 VKR-----KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 727
+KR K + + G + V+N+ + + F FG + ++ M+ G
Sbjct: 322 LKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRS 378
Query: 728 RGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+GFGFV F + EA +A+ T + GR
Sbjct: 379 KGFGFVCFSSPEEATKAV------TEMNGR 402
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 147 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 199
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 200 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 253
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
++LF FG V++ SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 254 KDLFGKFGPALSVKVMTDE--SGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYVG 310
Query: 763 WAEE 766
A++
Sbjct: 311 RAQK 314
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 278 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 325
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 326 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 377
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 378 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 418
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 26/191 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++++N + ++ L LF K+GP V + D E+ K+KGF V+F E A +A +
Sbjct: 239 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEM 297
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA---FNQVVEARSKRI----IL 451
+G G+ +++ G KV ER+ + F Q+ + R R +
Sbjct: 298 NGKELNGKQIYV---------GRAQKKV-----ERQTELKRKFEQMKQDRITRYQGVNLY 343
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTK 507
VKNL L+ F PFG + V G G V F +A A +
Sbjct: 344 VKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 403
Query: 508 FKEVPLYLEWA 518
PLY+ A
Sbjct: 404 VATKPLYVALA 414
>gi|22298986|ref|NP_682233.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
gi|22295168|dbj|BAC08995.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
Length = 90
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+++ NLSY TE+DL ++FEKYG + ++LP+D+ET K +GFA V A L
Sbjct: 3 LYIGNLSYEATENDLREVFEKYGAIRRIVLPVDRETGKRRGFAFVELADETQEAVAIDDL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEG 420
DG +LGR+L + KPK+ G
Sbjct: 63 DGATWLGRVLKVNKAKPKQPGG 84
>gi|302808075|ref|XP_002985732.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
gi|300146641|gb|EFJ13310.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
Length = 635
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 167/428 (39%), Gaps = 99/428 (23%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V +L VTE L +F + P+ + + D + ++ G+A V + + A++A
Sbjct: 36 STSLYVGDLDPNVTEGQLYDVFNQVAPVLSIRVCRDLISKRSLGYAYVNYNTGQDASRAL 95
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ L+ L+ GKP + S R + + I +KNL
Sbjct: 96 EMLN--------FSLVNGKP----------IRIMFSHR-----DPSIRKSGMANIFIKNL 132
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTK 507
D KAL++ F G +L + G V+F Q++ A++A +
Sbjct: 133 DKSI---DNKALYDTFAQFGNILSCKVAVDSSGQSRGYGFVQFEQEDAAQSAIKQVNGML 189
Query: 508 FKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEE 567
E +++ G F +E+ D G+ +
Sbjct: 190 LIEKQVFV-----GPFVRRQER---------------------------DLTGGIAKF-- 215
Query: 568 NVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSM 627
+Y+KNL +T+D ++R F + GPI+S V R + K S
Sbjct: 216 -------------NNVYVKNLGDATTDDDLKRVFGEFGPISSAVVMRDPEGK------SK 256
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQ 683
+GFV F + A++ L +D+ + + R+ + E EA R + K
Sbjct: 257 CFGFVNFENADDAALAVEELNGKKMDDKEWYVGRAQKKSEREAELRARYDQERKERSDKY 316
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNE 740
G + ++N+ ++ ELF FG + K +R P+ G +G GFV F T E
Sbjct: 317 QGVNLYLKNLDDTIDDDKLRELFHGFGTIISCKVMRDPQ-----GHSKGSGFVAFSTTEE 371
Query: 741 AKRAMKAL 748
A RAM +
Sbjct: 372 ANRAMTEM 379
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 163/433 (37%), Gaps = 108/433 (24%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------FLGMAYIGFKDEKNCNKALNK 277
++ V +L V + L F + P+ S+R LG AY+ + ++ ++AL
Sbjct: 38 SLYVGDLDPNVTEGQLYDVFNQVAPVLSIRVCRDLISKRSLGYAYVNYNTGQDASRALEM 97
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N S GK + I +D S + SG A+
Sbjct: 98 LNFSLVNGKPIRIMFSHRDPSIRKSGMAN------------------------------- 126
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
IF++NL ++ L F ++G + + +D + +++G+ V F + A A +
Sbjct: 127 --IFIKNLDKSIDNKALYDTFAQFGNILSCKVAVD-SSGQSRGYGFVQFEQEDAAQSAIK 183
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
++G + + + + + P + E ++ G + FN V VKNL
Sbjct: 184 QVNGMLLIEKQVFVGPFV-RRQERDLTGGIA---------KFNNV---------YVKNLG 224
Query: 457 YRTLPTDLKALFEPFGDLGRVLV--PPYG---ITGLVEFLQKNQAKAAFNSLAYTKFKEV 511
T DLK +F FG + +V P G G V F + A A L K +
Sbjct: 225 DATTDDDLKRVFGEFGPISSAVVMRDPEGKSKCFGFVNFENADDAALAVEELNGKKMDD- 283
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
KE G+ ++K+E E E +E D QGV
Sbjct: 284 ---------------KEWYVGRAQKKSEREAELRARYDQERKERSDKYQGV--------- 319
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
LY+KNL+ +D +R F G I S V R DP Q S G GF
Sbjct: 320 ----------NLYLKNLDDTIDDDKLRELFHGFGTIISCKVMR--DP----QGHSKGSGF 363
Query: 632 VQFYTRESLNQAL 644
V F T E N+A+
Sbjct: 364 VAFSTTEEANRAM 376
>gi|434389333|ref|YP_007099944.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus PCC
6605]
gi|428020323|gb|AFY96417.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus PCC
6605]
Length = 93
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT+DDLT+ F +YG + V LP D+ET + +GFA V + A + L
Sbjct: 3 IYVGNLSYEVTQDDLTQTFAEYGKVKRVQLPTDRETGRLRGFAFVEMETDAEESAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR L + KP+E +G+ G
Sbjct: 63 DGAEWMGRDLKVNKAKPREEKGSFGG 88
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ ++ Q ++ + F +G++K V+LP +G RGF FVE T E A++A
Sbjct: 3 IYVGNLSYEVTQDDLTQTFAEYGKVKRVQLPTDRE-TGRLRGFAFVEMETDAEESAAIEA 61
Query: 748 LCQSTHLYGRRL 759
L GR L
Sbjct: 62 L-DGAEWMGRDL 72
>gi|390596324|gb|EIN05726.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 614
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P TL++ NL+F + E+ ++ F+ G + SVT+ R KD + G+ V+F + E
Sbjct: 311 PSPTLFVGNLSFQAEEEDVQDLFEDFGVVESVTLGRGKDGR------MAGFAHVEFKSIE 364
Query: 639 SLNQALKVLQNSSL--DEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
+A++ Q S L E + L ++R S TT A + + + N+PF
Sbjct: 365 DALRAMERHQESPLAHAERTLTLDWAHRPSWSPQTTPDAHYMRNANPPTNTLFLGNLPFN 424
Query: 697 AKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL-CQST 752
+++E + + G+ K VR+ M G RGFG ++F + EA+RA AL +
Sbjct: 425 GTVADLEGMMRNVGDAPTPKEVRI--AMSPDGSSRGFGHMKFDSVEEAQRAKAALEAERA 482
Query: 753 HLYGRRLVLEWAEEADNV 770
L GRRLV+++A E ++V
Sbjct: 483 VLGGRRLVVDFAPEREHV 500
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 10/186 (5%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFK-KCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
+T++I L +TED +RRH P ++ +D Q S Y +V F ++E
Sbjct: 213 STVFIGALPSGTTEDDLRRHIGFLSSPSTDISHVHVRDL----QDGSASYAYVTFSSQEQ 268
Query: 640 LNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQ 699
+ ++ + S E + KR+ + A+ + R+ + + V N+ FQA++
Sbjct: 269 ADAFVQAHRTQSPVE--VGGKRAAVFYKPTASVMARRRAMEHMPPSPTLFVGNLSFQAEE 326
Query: 700 SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR- 758
+V++LF+ FG ++ V L + G GF VEF + +A RAM+ +S + R
Sbjct: 327 EDVQDLFEDFGVVESVTLGRGK--DGRMAGFAHVEFKSIEDALRAMERHQESPLAHAERT 384
Query: 759 LVLEWA 764
L L+WA
Sbjct: 385 LTLDWA 390
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 649 NSSLDEHQIELKRSNRNLESEATTVKR--KSSNVAKQTGSKILVRNIPFQAKQSEVEELF 706
S DE Q + + R E +R S +AK + L N+P++ + E+ E
Sbjct: 88 TSGRDEVQRDFRSGRRRDTREGGARERVVDDSPIAKHEATLFLA-NLPWKTTEDELREF- 145
Query: 707 KAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS-THLYGRRLVLEWAE 765
FGE K + + G+GL G V+F + ++A+ + S +L GR L + WA
Sbjct: 146 --FGEDKVADVKLAVHGNGLPAGTAHVQFASVDDARNVLDEHRNSQIYLGGRGLTVLWAV 203
Query: 766 EADNV 770
D V
Sbjct: 204 SKDRV 208
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 173/423 (40%), Gaps = 94/423 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +V + L +F + G + V + D T + G+A V F P A +A + L
Sbjct: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + ++ N D S RK A N I +KNL
Sbjct: 101 NFTPINGKPIRIM-------YSNRD------PSSRKSGAAN----------IFIKNLDKS 137
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL++ F G +L G V+F + A+ A + L +
Sbjct: 138 I---DNKALYDTFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLND 194
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G F +E+ +N G P+
Sbjct: 195 KKVYV-----GPFVRKQER---------------------------ENVSGNPKF----- 217
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
+Y+KNL+ ++TED+++ F K GPI SV V R+ D K S +G
Sbjct: 218 ----------NNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGK------SRCFG 261
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA----KQTGS 686
FV F + +A++ L D+ + + R+ + E E ++ N+ K G+
Sbjct: 262 FVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGT 321
Query: 687 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ ++N+ E ++E+F FG + ++ + + +G+ +G GFV F + +A RA+
Sbjct: 322 NLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDL--NGVSKGSGFVAFKSAEDASRAL 379
Query: 746 KAL 748
A+
Sbjct: 380 VAM 382
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 156/420 (37%), Gaps = 101/420 (24%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG AY+ F + +AL N + GK + I ++D S++ SGAA+
Sbjct: 80 LGYAYVNFSSPADAARALEMLNFTPINGKPIRIMYSNRDPSSRKSGAAN----------- 128
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
IF++NL ++ L F +G + + + + +
Sbjct: 129 ----------------------IFIKNLDKSIDNKALYDTFSVFGNILSCKVATEM-SGE 165
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KG+ V F + E A A L+G + + +++ P K+ NV G
Sbjct: 166 SKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPK--------- 216
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYG-----ITGLVEFL 491
FN V VKNL T +LK +F FG + V+V G G V F
Sbjct: 217 -FNNV---------YVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFE 266
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
+ A A L KF + Y+ A ++K+E E E E+ +K
Sbjct: 267 NPDDAARAVEDLNGKKFDDKEWYVCRA----------------QKKSEREMELKEKFEKN 310
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDS-IRRHFKKCGPIASV 610
D QG T LY+KNL+ + +D ++ F G I S
Sbjct: 311 IKEAADKNQG-------------------TNLYLKNLDDSIDDDEKLKEIFADFGTITSC 351
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V R + +S G GFV F + E ++AL + + + + + R E A
Sbjct: 352 KVMRDLN------GVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRKEERRA 405
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+ + + + F + G + SV V R + + LS+GY +V F +
Sbjct: 39 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTR-----LSLGYAYVNFSSPADA 93
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL++L + ++ I + SNR+ S RKS + I ++N+
Sbjct: 94 ARALEMLNFTPINGKPIRIMYSNRDPSS------RKSG------AANIFIKNLDKSIDNK 141
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F FG + ++ +M SG +G+GFV+F + A+ A+ L
Sbjct: 142 ALYDTFSVFGNILSCKVATEM--SGESKGYGFVQFELEEAAQNAISKL 187
>gi|342884659|gb|EGU84864.1| hypothetical protein FOXB_04645 [Fusarium oxysporum Fo5176]
Length = 736
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 26/242 (10%)
Query: 537 KNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDS 596
KN+ + E E+ + + ED G + + +E R +L++++L +T +S
Sbjct: 5 KNDRKRPHTEAEELDPASFEDRDNGAVKASKRARVEERR------SLFVRSLPPGATSES 58
Query: 597 IRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQ 656
+ F + P+ TV + K S GYGFV E +A K L N + +
Sbjct: 59 LTDFFSQHYPVKHATVVVDQKTKE-----SRGYGFVTLADAEDAAEAKKALNNQDWNGRR 113
Query: 657 IEL------KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE-VEELFKAF 709
I + +R+N E A V+++ Q K++VRN+P+ K SE + LF++F
Sbjct: 114 IRIDVAEPRQRNNTTGELPAHKVRKEEL----QRPPKLIVRNLPWSIKTSEQLSHLFRSF 169
Query: 710 GELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADN 769
G++KF LP+ G +GFGFV + A+RA++A+ + GR L ++WA + D
Sbjct: 170 GKVKFADLPQD---KGKLKGFGFVTLRGRPNAERALEAI-NGKEIDGRTLAVDWAVDKDT 225
Query: 770 VE 771
E
Sbjct: 226 WE 227
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 20/194 (10%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ E +FVR+L T + LT F ++ P+ + +D++T +++G+ VT E A
Sbjct: 39 VEERRSLFVRSLPPGATSESLTDFFSQHYPVKHATVVVDQKTKESRGYGFVTLADAEDAA 98
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKV--HCCISERKLDAFNQVVEARSKRII 450
+A + L+ + GR + + +P++ N G++ H E E + +
Sbjct: 99 EAKKALNNQDWNGRRIRIDVAEPRQ-RNNTTGELPAHKVRKE----------ELQRPPKL 147
Query: 451 LVKNLPYRTLPTD-LKALFEPFGDLGRVLVPP-----YGITGLVEFLQKNQAKAAFNSLA 504
+V+NLP+ ++ L LF FG + +P G G V + A+ A ++
Sbjct: 148 IVRNLPWSIKTSEQLSHLFRSFGKVKFADLPQDKGKLKGF-GFVTLRGRPNAERALEAIN 206
Query: 505 YTKFKEVPLYLEWA 518
+ L ++WA
Sbjct: 207 GKEIDGRTLAVDWA 220
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF 385
+F+RNL +T T++ L F+ +G + + +DK T+K G V F
Sbjct: 331 VFIRNLPFTTTDEQLKDFFDHFGKVRYARVVMDKVTEKPAGTGFVCF 377
>gi|171686972|ref|XP_001908427.1| hypothetical protein [Podospora anserina S mat+]
gi|170943447|emb|CAP69100.1| unnamed protein product [Podospora anserina S mat+]
Length = 663
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 22/196 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+L++++L ++T +S+ F + P+ TV DPK+ S GYGFV F E
Sbjct: 39 SLFVRSLPPSATSESLTNFFSQHYPVKHATVVL--DPKTK---TSRGYGFVSFADPEDAI 93
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEA-----------TTVKRKSSNVAKQT-GSKIL 689
+A L N LD ++ L + L A T +++ +A+Q K++
Sbjct: 94 EAKIKLNNELLDGRRLRLDIAQPRLRDAAKVSTEVAARVVTEKRQREEELAEQRKAPKLI 153
Query: 690 VRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+RN+P+ K SE + +LF+ FG++KF LP G GFGFV + A++A++A+
Sbjct: 154 IRNLPWSIKSSEQLAKLFQPFGKIKFADLPN---SKGKLSGFGFVTLRGRKNAEKALEAI 210
Query: 749 CQSTHLYGRRLVLEWA 764
+ GR + ++WA
Sbjct: 211 -NGKEIDGRTVAVDWA 225
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 6/186 (3%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT F ++ P+ + +D +T ++G+ V+F PE A +A L
Sbjct: 40 LFVRSLPPSATSESLTNFFSQHYPVKHATVVLDPKTKTSRGYGFVSFADPEDAIEAKIKL 99
Query: 399 DGTVFLGRMLHLIPGKPK-ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
+ + GR L L +P+ + V +V + K ++ E R ++++NLP+
Sbjct: 100 NNELLDGRRLRLDIAQPRLRDAAKVSTEVAARVVTEKRQREEELAEQRKAPKLIIRNLPW 159
Query: 458 RTLPTD-LKALFEPFGDLGRVLVP----PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVP 512
++ L LF+PFG + +P G V + A+ A ++ +
Sbjct: 160 SIKSSEQLAKLFQPFGKIKFADLPNSKGKLSGFGFVTLRGRKNAEKALEAINGKEIDGRT 219
Query: 513 LYLEWA 518
+ ++WA
Sbjct: 220 VAVDWA 225
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 182/461 (39%), Gaps = 105/461 (22%)
Query: 322 SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFA 381
S +S Q +E +A ++V L +VTE DL ++F G ++ + + D + ++ G+A
Sbjct: 35 STAESTQNSETLAS---LYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYA 91
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLD 436
V F +A + L+ T G+ ++ P + GN
Sbjct: 92 YVNFQSHADGEKALEELNYTPIKGKACRIMWSQRDPSLRRNGSGN--------------- 136
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLV 488
I +KNL D K L + F G++L G V
Sbjct: 137 -------------IFIKNL---HPAIDNKTLHDTFSAFGKILSCKIATDENGNSKGFGFV 180
Query: 489 EFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEE 548
+ + AKAA ++ + +Y+
Sbjct: 181 HYEESESAKAAIENVNGMLLNDHEVYV--------------------------------- 207
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
+ A++D Q + E+ N T +Y+KN+N N ED +R F G I+
Sbjct: 208 -GPHLAKKDRQSKMRELIANF-----------TNVYVKNINLNWDEDKLRETFSPFGTIS 255
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES 668
S+ +++ + K S G+GFV F E +A++ L N +D ++ + R+ + E
Sbjct: 256 SIFLSKDESGK------SRGFGFVNFEKHEDAVKAVEELNNKDIDGQKLYVGRAQKKSER 309
Query: 669 EATTVKR----KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 724
+ + + + K G + V+N+ +++EE FK +G + ++ + +
Sbjct: 310 MESLKHQYEAARQEQLNKYQGYNLFVKNLDDSIDDAKLEEEFKPYGTITSAKV--MLDDA 367
Query: 725 GLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE 765
G +GFGFV + + EA +A+ + Q + G+ L + A+
Sbjct: 368 GKSKGFGFVCYSSPEEATKAITEMHQRM-VAGKPLYVALAQ 407
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 93/204 (45%), Gaps = 30/204 (14%)
Query: 224 YHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKDEKNCNKA 274
+ + VKN+ + L+ F P ++ + FL G ++ F+ ++ KA
Sbjct: 227 FTNVYVKNINLNWDEDKLRETFSPF--GTISSIFLSKDESGKSRGFGFVNFEKHEDAVKA 284
Query: 275 LNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI 333
+ + N G++L + + K + ME++K ++ ++++ + +
Sbjct: 285 VEELNNKDIDGQKLYVGRAQKKSE-------------RMESLKHQYEAARQEQL----NK 327
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
+ +FV+NL ++ + L + F+ YG + + +D + K+KGF V + PE AT+
Sbjct: 328 YQGYNLFVKNLDDSIDDAKLEEEFKPYGTITSAKVMLD-DAGKSKGFGFVCYSSPEEATK 386
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKE 417
A + + G+ L++ + KE
Sbjct: 387 AITEMHQRMVAGKPLYVALAQRKE 410
>gi|115452253|ref|NP_001049727.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|108707490|gb|ABF95285.1| polyadenylate binding protein, types 1, 2, 3, 4 family protein,
expressed [Oryza sativa Japonica Group]
gi|113548198|dbj|BAF11641.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|215678518|dbj|BAG92173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624669|gb|EEE58801.1| hypothetical protein OsJ_10348 [Oryza sativa Japonica Group]
Length = 647
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 170/436 (38%), Gaps = 89/436 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +V E+ L ++F K G L V + D T + + V +L A A + L
Sbjct: 40 LYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEKL 99
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ ++ L D + S R DA V + VKNL
Sbjct: 100 NHSLIL------------------DKPIRVMWSNRDPDARRSGVGN-----VFVKNLNDL 136
Query: 459 TLPTDLKALFEPFGDLGRVLVPPY--GIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
L+ LF FGD+ V G + G V+F + A A+ +L + F L
Sbjct: 137 VDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLNNSHFCGRQL 196
Query: 514 YLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDE 573
++ F + E+S + +
Sbjct: 197 HV-----ATFIKKSERSTNNDDKY------------------------------------ 215
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
T LY+KNL+ + TE+ I+ F + G + SV + ++ D S G+GFV
Sbjct: 216 -------TNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSK------GFGFVS 262
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK----RKSSNVAKQTGSKIL 689
F ES +A + + L + + R+ + E + + +++ + K GS +
Sbjct: 263 FQNPESAKRAKESMNGMLLGSKTLYVARAQKKAERKQYLQRLHEEKRNEIITKSNGSNVY 322
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
++NI + + E F FG + ++ + G+ +GFGFV + T EAK A+ +
Sbjct: 323 IKNINDEVGDDALRERFNEFGNITSAKIMRD--EKGISKGFGFVCYNTPEEAKCAVSNM- 379
Query: 750 QSTHLYGRRLVLEWAE 765
+ YG+ L + A+
Sbjct: 380 RGVMFYGKPLYVAIAQ 395
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
LY+ +L+ + E+ + F K G + SV V R + S+ YG+V + ++
Sbjct: 39 ALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSN-----SLRYGYVNYLSQADAA 93
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE 701
AL+ L +S + + I + SNR+ ++ + V + V+N+
Sbjct: 94 IALEKLNHSLILDKPIRVMWSNRDPDARRSGV------------GNVFVKNLNDLVDNVS 141
Query: 702 VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL-- 759
++ELF FG++ ++ K G+ RG+GFV+F + A +++ L ++H GR+L
Sbjct: 142 LQELFCKFGDILSCKVAKNEDGTS--RGYGFVQFALQESADASIQNL-NNSHFCGRQLHV 198
Query: 760 --VLEWAEEADNVEDIRKRTNRYF 781
++ +E + N +D K TN Y
Sbjct: 199 ATFIKKSERSTNNDD--KYTNLYM 220
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 119/253 (47%), Gaps = 31/253 (12%)
Query: 303 AADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR----------IFVRNLSYTVTEDD 352
A ++ +AS++N+ H+ ++ + A I +S R ++++NL +TE+
Sbjct: 174 ALQESADASIQNLNNSHFCGRQ--LHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEEL 231
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
+ F +YG + V + + ++ +KGF V+F PE A +A + ++G + + L++
Sbjct: 232 IKLKFSQYGLVISVKI-MKRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVAR 290
Query: 413 GKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
+ K ++H E++ N+++ + + +KN+ L+ F FG
Sbjct: 291 AQKKAERKQYLQRLH---EEKR----NEIITKSNGSNVYIKNINDEVGDDALRERFNEFG 343
Query: 473 DL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAK 527
++ +++ GI+ G V + +AK A +++ F PLY+ A+ K
Sbjct: 344 NITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYV------AIAQRK 397
Query: 528 EKSKGKEKEKNEE 540
E+ + K +++ E
Sbjct: 398 EERRAKLEQRFAE 410
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQAY 395
G +FV+NL+ V L +LF K+G + + K D T +G+ V F + E A +
Sbjct: 126 GNVFVKNLNDLVDNVSLQELFCKFGDILSC--KVAKNEDGTSRGYGFVQFALQESADASI 183
Query: 396 QHLDGTVFLGRMLHL 410
Q+L+ + F GR LH+
Sbjct: 184 QNLNNSHFCGRQLHV 198
>gi|17230269|ref|NP_486817.1| RNA binding protein [Nostoc sp. PCC 7120]
gi|81859084|sp|Q9WX37.3|RBPE_NOSS1 RecName: Full=Putative RNA-binding protein RbpE
gi|4850342|dbj|BAA77711.1| RNA binding protein [Anabaena variabilis]
gi|17131870|dbj|BAB74476.1| RNA binding protein [Nostoc sp. PCC 7120]
Length = 99
Score = 76.6 bits (187), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 53/86 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY+VT+DDLTK+F +YG + V LP D+ET + +GF V A Q L
Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR+L + +P+E +G G
Sbjct: 63 DGAEWMGRVLKVNKARPREEKGARSG 88
>gi|119501270|ref|XP_001267392.1| ribosome biogenesis (Nop4), putative [Neosartorya fischeri NRRL
181]
gi|119415557|gb|EAW25495.1| ribosome biogenesis (Nop4), putative [Neosartorya fischeri NRRL
181]
Length = 732
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 143/330 (43%), Gaps = 40/330 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT+ F + + I+ D ET KG+ VTF E A A +
Sbjct: 44 LFVRSLPTSATTESLTEYFSQSYVIKHAIVVNDPETKLCKGYGFVTFADLEDAQAALKEF 103
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI----ILVKN 454
+G+VF G+ + + +P+ E +D + + Q E + ++V+N
Sbjct: 104 NGSVFEGKTIRVDYAQPRHRE--IDENLGKSVPAPAALELKQQREQQKTSTQPPKLIVRN 161
Query: 455 LPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFK 509
LP+ P DL F FG + V +P G G V K A+ A ++ +
Sbjct: 162 LPWSIKEPEDLAVHFRSFGKVKYVTLPKKGDQLAGFGFVVLRGKKNAEKALQAVNGKEVD 221
Query: 510 EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEE--EKKENTAEEDNQQGVPEVEE 567
L ++WA E E +K K+++ EE G E + E T++ ++ + + E+
Sbjct: 222 GRTLAVDWAVEKEVWENLKKESEKKEDTQEEAGSSDVEMADDAETTSDNEDVESDDDDED 281
Query: 568 NVEED---------------------EEREPEPDT-TLYIKNLNFNSTEDSIRRHFKKCG 605
+D +E+E E + T++I+NL F T++++ HF + G
Sbjct: 282 EDMDDDDEEDEEDMDEDEDEGNEDERQEKEDERNACTIFIRNLPFTCTDETLYEHFTQFG 341
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
P+ + + + P G GFV F+
Sbjct: 342 PLRYARIVVDLETERP-----RGTGFVCFW 366
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 120/238 (50%), Gaps = 24/238 (10%)
Query: 556 EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARK 615
+D Q + +++ +D+E P TL++++L ++T +S+ +F + I V
Sbjct: 18 QDTQTTMDSPRKDIVQDDEVST-PRRTLFVRSLPTSATTESLTEYFSQSYVIKHAIVV-- 74
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL-------KRSNRNLES 668
DP++ L GYGFV F E ALK S + I + + + NL
Sbjct: 75 NDPETK---LCKGYGFVTFADLEDAQAALKEFNGSVFEGKTIRVDYAQPRHREIDENLGK 131
Query: 669 EA---TTVKRKSSNVAKQTGS---KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKM 721
++ K ++T + K++VRN+P+ K+ E + F++FG++K+V LPKK
Sbjct: 132 SVPAPAALELKQQREQQKTSTQPPKLIVRNLPWSIKEPEDLAVHFRSFGKVKYVTLPKK- 190
Query: 722 VGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNR 779
G L GFGFV K A++A++A+ + GR L ++WA E + E+++K + +
Sbjct: 191 -GDQLA-GFGFVVLRGKKNAEKALQAV-NGKEVDGRTLAVDWAVEKEVWENLKKESEK 245
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
Q ED + IF+RNL +T T++ L + F ++GPL + +D ET++ +G V F
Sbjct: 308 QEKEDERNACTIFIRNLPFTCTDETLYEHFTQFGPLRYARIVVDLETERPRGTGFVCFWK 367
Query: 388 PEHA 391
E A
Sbjct: 368 VEDA 371
>gi|218245910|ref|YP_002371281.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257058958|ref|YP_003136846.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218166388|gb|ACK65125.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256589124|gb|ACV00011.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 98
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL+Y +TE+DLT++F +YG + V LP+D+ET K +GF V + A L
Sbjct: 3 IYVGNLAYEITEEDLTQVFAEYGTVKRVHLPVDRETQKMRGFGFVEMASDDQEDAAIAQL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + +P+EN
Sbjct: 63 DGAEWMGRQLKVNKARPREN 82
>gi|75906252|ref|YP_320548.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75699977|gb|ABA19653.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 99
Score = 76.6 bits (187), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 53/86 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY+VT+DDLTK+F +YG + V LP D+ET + +GF V A Q L
Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR+L + +P+E +G G
Sbjct: 63 DGAEWMGRVLKVNKARPREEKGARSG 88
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 9/191 (4%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
TL++ L++N ++ ++R F+ P+ VT AR K+ G+ S GYG+V F T+
Sbjct: 291 ATLFVGRLSWNIDDEWLQREFE---PLGGVTGARVIYEKASGK--SRGYGYVDFETKSQA 345
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS--SNVAKQTGSKILVRNIPFQAK 698
ALK Q +D I L S R +V S + + N+ F A+
Sbjct: 346 QHALKEYQGREIDGRPINLDMSESKPRPSNPRFDRAKQFGDVPSAPSSTLFIGNLSFNAQ 405
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
+ + ++F +G + R+P + +GFG++EF T +EAK A++AL ++ GR
Sbjct: 406 RDNLYDIFGEYGRVVSCRMP-THPDTQQPKGFGYIEFSTVDEAKAALEAL-NGEYVEGRP 463
Query: 759 LVLEWAEEADN 769
L+++ +N
Sbjct: 464 CRLDFSTPREN 474
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A S +F+ NLS+ D+L +F +YG + +P +T + KGF + F + A
Sbjct: 390 APSSTLFIGNLSFNAQRDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGYIEFSTVDEAKA 449
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKEN 418
A + L+G GR L P+EN
Sbjct: 450 ALEALNGEYVEGRPCRLDFSTPREN 474
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 25/206 (12%)
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
+DS + + E +FV LS+ + ++ L + FE G + + +K + K++G+ V
Sbjct: 278 QDSKRTKKQDEEPATLFVGRLSWNIDDEWLQREFEPLGGVTGARVIYEKASGKSRGYGYV 337
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHL--IPGKPKENEGNVDGKVHCCISERKLDAFNQV 441
F A A + G GR ++L KP+ + D + F V
Sbjct: 338 DFETKSQAQHALKEYQGREIDGRPINLDMSESKPRPSNPRFD----------RAKQFGDV 387
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL---VPPYGIT------GLVEFLQ 492
A S + + NL + L++ FG+ GRV+ +P + T G +EF
Sbjct: 388 PSAPSS-TLFIGNLSFN---AQRDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGYIEFST 443
Query: 493 KNQAKAAFNSLAYTKFKEVPLYLEWA 518
++AKAA +L + P L+++
Sbjct: 444 VDEAKAALEALNGEYVEGRPCRLDFS 469
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +TL+I NL+FN+ D++ F + G + S + D + P G+G+++F T +
Sbjct: 391 PSSTLFIGNLSFNAQRDNLYDIFGEYGRVVSCRMPTHPDTQQP-----KGFGYIEFSTVD 445
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNI 693
AL+ L ++ L S S + + + A+ + K+ + +
Sbjct: 446 EAKAALEALNGEYVEGRPCRLDFSTPRENSNRPSPRPQGRQPARPSQPKLEFKGV 500
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 105/190 (55%), Gaps = 17/190 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++ NL++N E+ +RR F++ G ++ V + +++ S G+G+V++ S
Sbjct: 233 LFVGNLSWNVDEEWLRREFEEFGELSGVRIMTERE-----SGRSRGFGYVEYADASSAKA 287
Query: 643 ALKVLQNSSLDEHQIELKRSN-RNLESEATTVKRKSSNVAKQTGSK-------ILVRNIP 694
A + +++ +D I L + R+ ++A + K+ N A+ G + + V N+
Sbjct: 288 AYEAKKDAEIDGRTINLDYAKPRDANNQAP--REKAQNRARSFGDQTSPESNTLFVGNLV 345
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
F ++ V E+F+ G+++ +RLP +G +G+G+VEF + +EA++A+ L Q T +
Sbjct: 346 FGVDENAVREVFEGQGQIQGIRLPTDAE-TGRPKGYGYVEFSSVDEARQALNDL-QGTDI 403
Query: 755 YGRRLVLEWA 764
GR + L+++
Sbjct: 404 GGRAIRLDFS 413
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSF-WKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G Y+ + D + A K G+ +N+ Y+ D NN A E
Sbjct: 273 GFGYVEYADASSAKAAYEAKKDAEIDGRTINL---------DYAKPRDANNQAPRE---- 319
Query: 318 KHWKSQEDSVQFAEDIA-ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
K+Q + F + + ES +FV NL + V E+ + ++FE G + + LP D ET +
Sbjct: 320 ---KAQNRARSFGDQTSPESNTLFVGNLVFGVDENAVREVFEGQGQIQGIRLPTDAETGR 376
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
KG+ V F + A QA L GT GR + L
Sbjct: 377 PKGYGYVEFSSVDEARQALNDLQGTDIGGRAIRL 410
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 83/216 (38%), Gaps = 44/216 (20%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP---YGIT---GLVEFLQKNQAKAAFNSL 503
+ V NL + L+ FE FG+L V + G + G VE+ + AKAA+ +
Sbjct: 233 LFVGNLSWNVDEEWLRREFEEFGELSGVRIMTERESGRSRGFGYVEYADASSAKAAYEAK 292
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
+ + L++A K + + EK +N A Q P
Sbjct: 293 KDAEIDGRTINLDYA------------------KPRDANNQAPREKAQNRARSFGDQTSP 334
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
E TL++ NL F E+++R F+ G I + + + P
Sbjct: 335 E---------------SNTLFVGNLVFGVDENAVREVFEGQGQIQGIRLPTDAETGRP-- 377
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
GYG+V+F + + QAL LQ + + I L
Sbjct: 378 ---KGYGYVEFSSVDEARQALNDLQGTDIGGRAIRL 410
>gi|7239504|gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding protein 5 (PAB5) from
Arabidopsis thaliana gb|M97657 [Arabidopsis thaliana]
Length = 668
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 170/422 (40%), Gaps = 92/422 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +V E L LF + P+ + + D T ++ G+A V F PE A++A + L
Sbjct: 47 LYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESL 105
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ R + ++ +S R + K + +KNL
Sbjct: 106 NYAPIRDRPIRIM------------------LSNR-----DPSTRLSGKGNVFIKNL--- 139
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL+E F G +L + G V+F ++ A+AA + L +
Sbjct: 140 DASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLND 199
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+++ G F +++++ E G VP
Sbjct: 200 KQVFV-----GHFVRRQDRAR-------SESG------------------AVPSF----- 224
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
T +Y+KNL T+D +++ F K G I+S V + + S +G
Sbjct: 225 ----------TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN------SRSFG 268
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGS 686
FV F + E+ A++ + SL E + + K+S+R E + + S K GS
Sbjct: 269 FVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGS 328
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+ ++N+ +++E+F +G + ++ M GL RGFGFV + EA AMK
Sbjct: 329 NLYLKNLDDSVNDEKLKEMFSEYGNVTSCKV--MMNSQGLSRGFGFVAYSNPEEALLAMK 386
Query: 747 AL 748
+
Sbjct: 387 EM 388
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 85/425 (20%), Positives = 156/425 (36%), Gaps = 110/425 (25%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG AY+ F + ++ ++A+ N + + + + I ++D S + SG
Sbjct: 85 LGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSG-------------- 130
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
G +F++NL ++ L + F +G + + +D +
Sbjct: 131 -------------------KGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGR 170
Query: 377 TKGFALVTFLMPEHATQAYQHLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCI 430
+KG+ V F E A A L+G VF+G H +
Sbjct: 171 SKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVG---HFV------------------- 208
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV--PPYGIT--- 485
R+ A ++ S + VKNLP +LK F +GD+ +V G +
Sbjct: 209 -RRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSF 267
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG 545
G V F+ A A + E LY+ G+ ++K++ E E
Sbjct: 268 GFVNFVSPEAAAVAVEKMNGISLGEDVLYV----------------GRAQKKSDREEELR 311
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
+ ++E + + QG + LY+KNL+ + ++ ++ F + G
Sbjct: 312 RKFEQERISRFEKLQG-------------------SNLYLKNLDDSVNDEKLKEMFSEYG 352
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRN 665
+ S V Q LS G+GFV + E A+K + + + + + R
Sbjct: 353 NVTSCKVMMNS------QGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRK 406
Query: 666 LESEA 670
E +A
Sbjct: 407 EERQA 411
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 217 APVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALN 276
AP+ R ++ P+ + K L AS+ L + F +C A++
Sbjct: 108 APIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLD-ASIDNKALYETFSSFGTILSCKVAMD 166
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK---AKHWKSQEDSVQFAEDI 333
+ K ++ K+ +A+ AA D N + N K H+ ++D +
Sbjct: 167 ---VVGRSKGYGFVQFEKEETAQ---AAIDKLNGMLLNDKQVFVGHFVRRQDRAR----- 215
Query: 334 AESG------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
+ESG ++V+NL +T+D+L K F KYG ++ ++ + ++ ++ F V F+
Sbjct: 216 SESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVV-MKDQSGNSRSFGFVNFVS 274
Query: 388 PEHATQAYQHLDG------TVFLGR 406
PE A A + ++G +++GR
Sbjct: 275 PEAAAVAVEKMNGISLGEDVLYVGR 299
>gi|294883272|ref|XP_002770538.1| hypothetical protein Pmar_PMAR013164 [Perkinsus marinus ATCC 50983]
gi|239873961|gb|EER02695.1| hypothetical protein Pmar_PMAR013164 [Perkinsus marinus ATCC 50983]
Length = 182
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
++ R+ + NL Y TEDD+ K F+K+G + +V++ D+++ K++G A VT+L PEHA +A
Sbjct: 2 DTARLLLVNLPYIATEDDIKKAFQKFGSIEDVVVLRDEDSKKSRGMAYVTYLFPEHAVRA 61
Query: 395 YQHLDGTVFLGRMLHL--IPGKPKEN 418
+ G VF GR+L + +PK++
Sbjct: 62 KAEMHGKVFQGRVLRIKAAQARPKKH 87
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 98/193 (50%), Gaps = 10/193 (5%)
Query: 578 EP-DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
EP ++T+++ NL++N E+ + F CG + S AR K G+ + G+G+V F +
Sbjct: 179 EPVNSTVFVGNLSWNVDEEMLAATFADCGTVES---ARIITDKETGR--AKGFGYVTFES 233
Query: 637 RESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
++L A+ L + LD +I + S + RK + + T + + + N+ F
Sbjct: 234 ADALTAAM-ALTGTELDGREIRVDVSTPKPPRDGNRQGRKEAPQSAPT-TTLFLGNLSFN 291
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
+ E+ E F +G+L VR P +G +GFG+VE+ A++A++ L + G
Sbjct: 292 VTEDEIRESFSQYGQLVSVRFPTDR-DTGAFKGFGYVEYGDVETAQKAVEGL-NGVEIAG 349
Query: 757 RRLVLEWAEEADN 769
R L L++A DN
Sbjct: 350 RSLRLDYAGGRDN 362
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 38/225 (16%)
Query: 196 KLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRT 255
K K +S D A +P+ P ++ PV+ T+ V NL V ++ L A F +V +
Sbjct: 158 KSKKRSADEAAEEPTKKPKTEEPVN----STVFVGNLSWNVDEEMLAATF--ADCGTVES 211
Query: 256 TFL----------GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAAD 305
+ G Y+ F+ A+ + G+++ + + + D
Sbjct: 212 ARIITDKETGRAKGFGYVTFESADALTAAMALTGTELDGREIRV------DVSTPKPPRD 265
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
N E A A + +F+ NLS+ VTED++ + F +YG L
Sbjct: 266 GNRQGRKE----------------APQSAPTTTLFLGNLSFNVTEDEIRESFSQYGQLVS 309
Query: 366 VILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
V P D++T KGF V + E A +A + L+G GR L L
Sbjct: 310 VRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLNGVEIAGRSLRL 354
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 21/187 (11%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV NLS+ V E+ L F G + + DKET + KGF VTF + T A L
Sbjct: 185 VFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESADALTAAM-AL 243
Query: 399 DGTVFLGRMLHLIPGKPK-ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
GT GR + + PK +GN G+ + ++ + + NL +
Sbjct: 244 TGTELDGREIRVDVSTPKPPRDGNRQGR-------------KEAPQSAPTTTLFLGNLSF 290
Query: 458 RTLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAFNSLAYTKFKEV 511
+++ F +G L V P TG VE+ A+ A L +
Sbjct: 291 NVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLNGVEIAGR 350
Query: 512 PLYLEWA 518
L L++A
Sbjct: 351 SLRLDYA 357
>gi|166786|gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]
Length = 668
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 170/422 (40%), Gaps = 92/422 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +V E L LF + P+ + + D T ++ G+A V F PE A++A + L
Sbjct: 47 LYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESL 105
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ R + ++ +S R + K + +KNL
Sbjct: 106 NYAPIRDRPIRIM------------------LSNR-----DPSTRLSGKGNVFIKNL--- 139
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL+E F G +L + G V+F ++ A+AA + L +
Sbjct: 140 DASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLND 199
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+++ G F +++++ E G VP
Sbjct: 200 KQVFV-----GHFVRRQDRAR-------SESG------------------AVPSF----- 224
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
T +Y+KNL T+D +++ F K G I+S V + + S +G
Sbjct: 225 ----------TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN------SRSFG 268
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGS 686
FV F + E+ A++ + SL E + + K+S+R E + + S K GS
Sbjct: 269 FVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGS 328
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+ ++N+ +++E+F +G + ++ M GL RGFGFV + EA AMK
Sbjct: 329 NLYLKNLDDSVNDEKLKEMFSEYGNVTSCKV--MMNSQGLSRGFGFVAYSNPEEALLAMK 386
Query: 747 AL 748
+
Sbjct: 387 EM 388
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 85/425 (20%), Positives = 156/425 (36%), Gaps = 110/425 (25%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG AY+ F + ++ ++A+ N + + + + I ++D S + SG
Sbjct: 85 LGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSG-------------- 130
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
G +F++NL ++ L + F +G + + +D +
Sbjct: 131 -------------------KGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGR 170
Query: 377 TKGFALVTFLMPEHATQAYQHLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCI 430
+KG+ V F E A A L+G VF+G H +
Sbjct: 171 SKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVG---HFV------------------- 208
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV--PPYGIT--- 485
R+ A ++ S + VKNLP +LK F +GD+ +V G +
Sbjct: 209 -RRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSF 267
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG 545
G V F+ A A + E LY+ G+ ++K++ E E
Sbjct: 268 GFVNFVSPEAAAVAVEKMNGISLGEDVLYV----------------GRAQKKSDREEELR 311
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
+ ++E + + QG + LY+KNL+ + ++ ++ F + G
Sbjct: 312 RKFEQERISRFEKLQG-------------------SNLYLKNLDDSVNDEKLKEMFSEYG 352
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRN 665
+ S V Q LS G+GFV + E A+K + + + + + R
Sbjct: 353 NVTSCKVMMNS------QGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRK 406
Query: 666 LESEA 670
E +A
Sbjct: 407 EERQA 411
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 217 APVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALN 276
AP+ R ++ P+ + K L AS+ L + F +C A++
Sbjct: 108 APIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLD-ASIDNKALYETFSSFGTILSCKVAMD 166
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK---AKHWKSQEDSVQFAEDI 333
+ K ++ K+ +A+ AA D N + N K H+ ++D +
Sbjct: 167 ---VVGRSKGYGFVQFEKEETAQ---AAIDKLNGMLLNDKQVFVGHFVRRQDRAR----- 215
Query: 334 AESG------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
+ESG ++V+NL +T+D+L K F KYG ++ ++ + ++ ++ F V F+
Sbjct: 216 SESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVV-MKDQSGNSRSFGFVNFVS 274
Query: 388 PEHATQAYQHLDG------TVFLGR 406
PE A A + ++G +++GR
Sbjct: 275 PEAAAVAVEKMNGISLGEDVLYVGR 299
>gi|448115215|ref|XP_004202770.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
gi|359383638|emb|CCE79554.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
Length = 626
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 182/463 (39%), Gaps = 109/463 (23%)
Query: 325 DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVT 384
DS Q + S ++V L+ +V E L ++F G ++ + + D T K+ G+A V
Sbjct: 41 DSTQLPDT---SASLYVGELNPSVNEASLFEIFSPVGQVSSIRVCRDAVTKKSLGYAYVN 97
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFN 439
F E +A L+ ++ GR ++ P + EGN
Sbjct: 98 FHKLEDGEKAIDDLNYSLIDGRPCRIMWSQRDPSLRRNGEGN------------------ 139
Query: 440 QVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFL 491
I +KNL D KAL + F G++L G V +
Sbjct: 140 ----------IFIKNL---HPAIDNKALHDTFSAFGKILSCKVATDEQGNSKCFGFVHYE 186
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
A+AA ++ G+ +E GK K + E + EE K
Sbjct: 187 TAEAARAAIENV----------------NGMLLNDREVYVGKHVSKKDRESKF--EEMKA 228
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
N T +Y+KN++ +E+ +R F+ G I S+
Sbjct: 229 NF---------------------------TNVYVKNIDLGFSEEEMRNLFEPYGKITSLH 261
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
+ + + K S G+GFV F + E+ +A++ L + ++ + + R+ + E
Sbjct: 262 LEKDAEGK------SKGFGFVNFESHEAAVKAVEELNDKDINGQNLYVGRAQKKRE-RIE 314
Query: 672 TVKRKSSN-----VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS-G 725
+KR+ ++K G + V+N+ ++EE FK FG + R+ MV G
Sbjct: 315 ELKRQYETARLEKLSKYQGVNLFVKNLDDSIDSVKLEEEFKPFGTITSARV---MVDEHG 371
Query: 726 LHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
+GFGFV F + EA +A+ + Q +G+ L + A+ D
Sbjct: 372 KSKGFGFVCFSSPEEATKAITEMNQRM-FHGKPLYVALAQRKD 413
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 17/231 (7%)
Query: 297 SAKYSGAADDNNNASMENIK----AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+A+ + AA +N N + N + KH ++ +F E A ++V+N+ +E++
Sbjct: 187 TAEAARAAIENVNGMLLNDREVYVGKHVSKKDRESKFEEMKANFTNVYVKNIDLGFSEEE 246
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
+ LFE YG + + L D E K+KGF V F E A +A + L+ G+ L++
Sbjct: 247 MRNLFEPYGKITSLHLEKDAEG-KSKGFGFVNFESHEAAVKAVEELNDKDINGQNLYVGR 305
Query: 413 GKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
+ K + + KL + V + VKNL L+ F+PFG
Sbjct: 306 AQKKRERIEELKRQYETARLEKLSKYQGVN-------LFVKNLDDSIDSVKLEEEFKPFG 358
Query: 473 DL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+ RV+V +G + G V F +A A + F PLY+ A
Sbjct: 359 TITSARVMVDEHGKSKGFGFVCFSSPEEATKAITEMNQRMFHGKPLYVALA 409
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 89/200 (44%), Gaps = 30/200 (15%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKDEKNC 271
K + + VKN+ G +++++ F+P + + L G ++ F+ +
Sbjct: 227 KANFTNVYVKNIDLGFSEEEMRNLFEPY--GKITSLHLEKDAEGKSKGFGFVNFESHEAA 284
Query: 272 NKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA 330
KA+ + N G+ L + + K +E +K ++ ++ + +
Sbjct: 285 VKAVEELNDKDINGQNLYVGRAQKKRE-------------RIEELKRQYETARLEKLSKY 331
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
+ + +FV+NL ++ L + F+ +G + + +D E K+KGF V F PE
Sbjct: 332 QGV----NLFVKNLDDSIDSVKLEEEFKPFGTITSARVMVD-EHGKSKGFGFVCFSSPEE 386
Query: 391 ATQAYQHLDGTVFLGRMLHL 410
AT+A ++ +F G+ L++
Sbjct: 387 ATKAITEMNQRMFHGKPLYV 406
>gi|389633057|ref|XP_003714181.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|351646514|gb|EHA54374.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|440473688|gb|ELQ42470.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae Y34]
gi|440486239|gb|ELQ66126.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae P131]
Length = 486
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 14/189 (7%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+TL++ NL++N + + FK CG +VT AR + G+ S G+G+V F T E
Sbjct: 239 STLFVGNLSWNVDDAMLAEEFKFCG---TVTSARVITDRESGR--SKGFGYVDFATPEEA 293
Query: 641 NQALKVLQNSSLDEHQIEL-----KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+A Q + +D +I++ K +N N ++ K+ V+ ++ + + V N+PF
Sbjct: 294 EKAHGEKQGAFIDGREIKVDFSTGKATNSN-DAAGARAKKYGDTVSPESDT-LFVGNLPF 351
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
A + V F E+K +RLP + SG +GFG+V F + +AK A + L +
Sbjct: 352 DADEDSVGAFFSEVAEVKSLRLPTEQE-SGRRKGFGYVTFNSVEDAKSAFEQL-NGQSIN 409
Query: 756 GRRLVLEWA 764
GR L+++
Sbjct: 410 GRNCRLDYS 418
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 22/164 (13%)
Query: 259 GMAYIGFKDEKNCNKALN-KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G Y+ F + KA K +F G+++ + +S +G A ++N+A+ +A
Sbjct: 281 GFGYVDFATPEEAEKAHGEKQGAFIDGREIKV-DFS-------TGKATNSNDAA--GARA 330
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
K + D+V ES +FV NL + ED + F + + + LP ++E+ +
Sbjct: 331 KKYG---DTVS-----PESDTLFVGNLPFDADEDSVGAFFSEVAEVKSLRLPTEQESGRR 382
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL---IPGKPKEN 418
KGF VTF E A A++ L+G GR L P P+E+
Sbjct: 383 KGFGYVTFNSVEDAKSAFEQLNGQSINGRNCRLDYSTPRPPRED 426
>gi|209527224|ref|ZP_03275736.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376003288|ref|ZP_09781101.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|209492382|gb|EDZ92725.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375328318|emb|CCE16854.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
Length = 93
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT DDL+++F +YG + ++P D+ET +++GF V + + T+A + L
Sbjct: 3 IYVGNLSYDVTPDDLSEVFAQYGTVKRSMIPTDRETGRSRGFGFVEMVNEDEETKAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + +P+EN
Sbjct: 63 DGAEWMGRSLKVNKARPREN 82
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ + ++ E+F +G +K +P +G RGFGFVE + ++E +A++A
Sbjct: 3 IYVGNLSYDVTPDDLSEVFAQYGTVKRSMIPTDRE-TGRSRGFGFVEMVNEDEETKAIEA 61
Query: 748 LCQSTHLYGRRLVLEWAEEADN 769
L GR L + A +N
Sbjct: 62 L-DGAEWMGRSLKVNKARPREN 82
>gi|116191833|ref|XP_001221729.1| hypothetical protein CHGG_05634 [Chaetomium globosum CBS 148.51]
gi|88181547|gb|EAQ89015.1| hypothetical protein CHGG_05634 [Chaetomium globosum CBS 148.51]
Length = 792
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 22/200 (11%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
E + L++++L N+T +S+ F + P+ TV DPK+ S GYGFV F
Sbjct: 37 ESNRQLFVRSLPPNATSESLTEFFSQHYPVKHATVV--VDPKTK---FSRGYGFVSFADP 91
Query: 638 ESLNQALKVLQNSSLDEHQIEL----------KRSNRNLESEATTVKRKSSNVAKQT--G 685
+ +A L+N +++L +S ++A VKRK ++
Sbjct: 92 DDAAEAKDKLKNELFSGRRLKLDIAQSRHRNPTKSGSEALTKAAEVKRKRQADLEEARKA 151
Query: 686 SKILVRNIPFQAKQS-EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
K+++RN+P+ K S ++ +LF++FG++KF LP G GFGFV + A++A
Sbjct: 152 PKLIIRNLPWSIKTSDQLAKLFQSFGKVKFSDLPN---NKGKLSGFGFVTLRGRKNAEKA 208
Query: 745 MKALCQSTHLYGRRLVLEWA 764
++A+ + GR L ++WA
Sbjct: 209 IEAI-NGKEVDGRTLAVDWA 227
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 335 ESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
ES R +FVR+L T + LT+ F ++ P+ + +D +T ++G+ V+F P+ A +
Sbjct: 37 ESNRQLFVRSLPPNATSESLTEFFSQHYPVKHATVVVDPKTKFSRGYGFVSFADPDDAAE 96
Query: 394 AYQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
A L +F GR L L I N + +E K + EAR +++
Sbjct: 97 AKDKLKNELFSGRRLKLDIAQSRHRNPTKSGSEALTKAAEVKRKRQADLEEARKAPKLII 156
Query: 453 KNLPYRTLPTD-LKALFEPFGDLGRVLVP----PYGITGLVEFLQKNQAKAAFNSLAYTK 507
+NLP+ +D L LF+ FG + +P G V + A+ A ++ +
Sbjct: 157 RNLPWSIKTSDQLAKLFQSFGKVKFSDLPNNKGKLSGFGFVTLRGRKNAEKAIEAINGKE 216
Query: 508 FKEVPLYLEWA 518
L ++WA
Sbjct: 217 VDGRTLAVDWA 227
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
DTTL+I+NL +++T+++++ HF GP+ V + P G GFV F+ E
Sbjct: 352 DTTLFIRNLPYSTTDETLKAHFATFGPVRYARVVMDRATDRPA-----GTGFVCFFNEED 406
Query: 640 LNQALK 645
LK
Sbjct: 407 FKACLK 412
>gi|238492008|ref|XP_002377241.1| ribosome biogenesis (Nop4), putative [Aspergillus flavus NRRL3357]
gi|220697654|gb|EED53995.1| ribosome biogenesis (Nop4), putative [Aspergillus flavus NRRL3357]
Length = 729
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 161/355 (45%), Gaps = 41/355 (11%)
Query: 313 ENIKAKHWKSQEDSVQFAEDIAESGR--IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPI 370
E ++A ++ D+VQ E +++ R +FVR+L +VT + L + F + + ++
Sbjct: 20 EEVEAAMDTAKNDTVQ-EESVSDKPRRTLFVRSLPASVTTEKLVEYFSQSYVIKHALVVN 78
Query: 371 DKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCI 430
D ET ++KG+ VTF + A A +G+VF G+ + + +P+ VD +
Sbjct: 79 DSETKQSKGYGFVTFADVDDAKAALDEFNGSVFDGKKIKVDYAQPRHR--TVDENAGKSV 136
Query: 431 -SERKLDAFNQVVEARSKRI---ILVKNLPYRTL-PTDLKALFEPFGDLGRVLVPPYGIT 485
S L+A Q + R+ ++V+NLP+ P DL F FG + V +P G
Sbjct: 137 PSSAALEAKKQREQERAATQPPKLIVRNLPWSIKEPDDLAVHFRSFGKIKYVNLPKKGNK 196
Query: 486 ----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPE-GVFAEAKEKSKGKEKEKNEE 540
G V K A+ A ++ + L ++WA + V+ ++ S+ + + EE
Sbjct: 197 LAGFGFVVLRGKKNAEKALEAVNGKEVDGRTLAVDWAVDKAVWENIQQDSQEQGNGEEEE 256
Query: 541 EGEEGEEEKKENTAEEDNQQGVPEVEENVEE--------------------DEEREPEPD 580
+ + E + D+ +PE +E+++E +E+ +
Sbjct: 257 SSDAEMADDAEAESGVDDDGDLPE-DEDMDEIAQSDEDEDEEEEEEEEEEEEEKEDERTA 315
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
T++I+NL F T++++ HF + GP+ + + + P G GFV F+
Sbjct: 316 ATVFIRNLPFTCTDETLYEHFTQFGPLRYARIVVDPETERP-----RGTGFVCFW 365
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 34/251 (13%)
Query: 539 EEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIR 598
E G E E +TA+ D Q EE+V + +P TL++++L + T + +
Sbjct: 14 EGRGNSEEVEAAMDTAKNDTVQ-----EESVSD------KPRRTLFVRSLPASVTTEKLV 62
Query: 599 RHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIE 658
+F + I V + K S GYGFV F + AL S D +I+
Sbjct: 63 EYFSQSYVIKHALVVNDSETKQ-----SKGYGFVTFADVDDAKAALDEFNGSVFDGKKIK 117
Query: 659 L-----------KRSNRNLESEAT--TVKRKSSNVAKQTGSKILVRNIPFQAKQ-SEVEE 704
+ + + +++ S A K++ A K++VRN+P+ K+ ++
Sbjct: 118 VDYAQPRHRTVDENAGKSVPSSAALEAKKQREQERAATQPPKLIVRNLPWSIKEPDDLAV 177
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
F++FG++K+V LPKK G+ L GFGFV K A++A++A+ + GR L ++WA
Sbjct: 178 HFRSFGKIKYVNLPKK--GNKLA-GFGFVVLRGKKNAEKALEAV-NGKEVDGRTLAVDWA 233
Query: 765 EEADNVEDIRK 775
+ E+I++
Sbjct: 234 VDKAVWENIQQ 244
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 203 DTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK-------PLPLASVRT 255
DTA +D V + V + T+ V++LPA V + L YF L + T
Sbjct: 27 DTAKNDT----VQEESVSDKPRRTLFVRSLPASVTTEKLVEYFSQSYVIKHALVVNDSET 82
Query: 256 -TFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASME 313
G ++ F D + AL++ N S + GK++ + D + D+N S+
Sbjct: 83 KQSKGYGFVTFADVDDAKAALDEFNGSVFDGKKIKV-----DYAQPRHRTVDENAGKSVP 137
Query: 314 NIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDK 372
+ A K Q + + A + ++ VRNL +++ E DDL F +G + V LP K
Sbjct: 138 SSAALEAKKQREQERAA---TQPPKLIVRNLPWSIKEPDDLAVHFRSFGKIKYVNLP--K 192
Query: 373 ETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+ +K GF V ++A +A + ++G GR L +
Sbjct: 193 KGNKLAGFGFVVLRGKKNAEKALEAVNGKEVDGRTLAV 230
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+F+RNL +T T++ L + F ++GPL + +D ET++ +G V F E A
Sbjct: 318 VFIRNLPFTCTDETLYEHFTQFGPLRYARIVVDPETERPRGTGFVCFWKVEDAA 371
>gi|336262061|ref|XP_003345816.1| hypothetical protein SMAC_07100 [Sordaria macrospora k-hell]
gi|380088590|emb|CCC13476.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 772
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 21/199 (10%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
E + +L+I+ L ++T +S+ F + P+ TV DPK+ S GYGFV F
Sbjct: 43 ESNRSLFIRQLPPSATAESLTEFFSQHFPVKHATVVL--DPKTK---TSRGYGFVTFTDP 97
Query: 638 ESLNQALKVLQNSSLDEHQIEL---KRSNRNLESEATTV------KRKSSNVAK--QTGS 686
E +A L N L +++L + +R+ + V K+K + A+ Q +
Sbjct: 98 EDTLEAKAKLNNYLLQGKRLKLDIAEARHRDAKKTGPIVSKVAEEKKKRAEAAEEAQKPN 157
Query: 687 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
K+++RN+P+ K+SE + ELFK +G+++F LP G GFGFV + A++A+
Sbjct: 158 KLIIRNLPWSIKKSEQLAELFKPYGKVRFADLPN---DKGKLSGFGFVTLRGRKNAEKAI 214
Query: 746 KALCQSTHLYGRRLVLEWA 764
+A+ + GR L ++WA
Sbjct: 215 EAI-NGMEVDGRPLAVDWA 232
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 335 ESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
ES R +F+R L + T + LT+ F ++ P+ + +D +T ++G+ VTF PE +
Sbjct: 43 ESNRSLFIRQLPPSATAESLTEFFSQHFPVKHATVVLDPKTKTSRGYGFVTFTDPEDTLE 102
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A L+ + G+ L L + + + G + ++E K EA+ ++++
Sbjct: 103 AKAKLNNYLLQGKRLKLDIAEARHRDAKKTGPIVSKVAEEKKKRAEAAEEAQKPNKLIIR 162
Query: 454 NLPYRTLPTD-LKALFEPFGDLGRVLVP----PYGITGLVEFLQKNQAKAAFNSLAYTKF 508
NLP+ ++ L LF+P+G + +P G V + A+ A ++ +
Sbjct: 163 NLPWSIKKSEQLAELFKPYGKVRFADLPNDKGKLSGFGFVTLRGRKNAEKAIEAINGMEV 222
Query: 509 KEVPLYLEWA 518
PL ++WA
Sbjct: 223 DGRPLAVDWA 232
>gi|407923520|gb|EKG16590.1| hypothetical protein MPH_06171 [Macrophomina phaseolina MS6]
Length = 759
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 122/241 (50%), Gaps = 20/241 (8%)
Query: 291 KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTE 350
+ S+D A +ADD+++ S+ N+ ++ S D A + ++FVR L TVT
Sbjct: 9 RLSEDGKAVAVPSADDSHDQSV-NLASEAQASHADDANQA--LKHRRQLFVRGLGSTVTT 65
Query: 351 DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
DDLT+ F + P+ + +DK+T + +G+ VTF E A +A L+G+ GR + +
Sbjct: 66 DDLTEHFSQSFPIKHAVAVLDKDTKQCRGYGFVTFADAEDAARARDELNGSELQGRKIKV 125
Query: 411 IPGKPK----ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPT--DL 464
+P+ +N GKV +RK + Q+ ++SK ++++NLP+ ++ T +L
Sbjct: 126 DVAEPRHRDPDNGAGQPGKVAQEAKQRKQE---QMHPSQSK--LIIRNLPW-SIKTEEEL 179
Query: 465 KALFEPFGDLGRVLVP--PYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAP 519
LF +G + + ++P G+ G V K A+ A ++ + L ++W+
Sbjct: 180 TKLFLSYGKVKKAILPKKSNGMLAGYGFVTLRGKKNAERALEAVNGREIDGRTLAVDWSV 239
Query: 520 E 520
E
Sbjct: 240 E 240
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+++ L T D + HF + PI KD K GYGFV F E +
Sbjct: 54 LFVRGLGSTVTTDDLTEHFSQSFPIKHAVAVLDKDTKQ-----CRGYGFVTFADAEDAAR 108
Query: 643 ALKVLQNSSLDEHQIEL------KRSNRNLESE----ATTVKRKSSNVAKQTGSKILVRN 692
A L S L +I++ R N + A K++ + SK+++RN
Sbjct: 109 ARDELNGSELQGRKIKVDVAEPRHRDPDNGAGQPGKVAQEAKQRKQEQMHPSQSKLIIRN 168
Query: 693 IPFQAK-QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
+P+ K + E+ +LF ++G++K LPKK +G+ G+GFV K A+RA++A+
Sbjct: 169 LPWSIKTEEELTKLFLSYGKVKKAILPKK--SNGMLAGYGFVTLRGKKNAERALEAV-NG 225
Query: 752 THLYGRRLVLEWAEE 766
+ GR L ++W+ E
Sbjct: 226 REIDGRTLAVDWSVE 240
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
E E L+I NL++N ED +R+ F+ G ++ V + +D S G+G+V+
Sbjct: 253 EEETGASANLFIGNLSWNVDEDWLRQEFETFGELSGVRIVTDRD-----SGRSRGFGYVE 307
Query: 634 FYTRESLNQALKVLQNSSLDEHQIEL---------KRSNRNLESEATTVKRKSSNVAKQT 684
+ + +A K +++ LD +I L + + A R + +
Sbjct: 308 YVSAADAAKAYKAKKDTELDGRKINLDYATGRPANNQQGGGFQDRAQARARSFGDQSSPE 367
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ V N+PF A + V+ELF G + +RLP SG +GFG+V+F + +EA+ A
Sbjct: 368 SDTLFVGNLPFSANEDSVQELFGEKGSIVGIRLPTDP-DSGRPKGFGYVQFASVDEAREA 426
Query: 745 MKALCQSTHLYGRRLVLEWA 764
+L L GR + L+++
Sbjct: 427 FNSL-NGAELDGRPVRLDFS 445
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 326 SVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF 385
S Q E+ S +F+ NLS+ V ED L + FE +G L+ V + D+++ +++GF V +
Sbjct: 249 SKQAEEETGASANLFIGNLSWNVDEDWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEY 308
Query: 386 LMPEHATQAYQHLDGTVFLGRMLHL--IPGKPKENEGNVDGKVHCCISERKLDAFNQVVE 443
+ A +AY+ T GR ++L G+P N+ G ++ + +F
Sbjct: 309 VSAADAAKAYKAKKDTELDGRKINLDYATGRPANNQ---QGGGFQDRAQARARSFGDQSS 365
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQA 496
S + V NLP+ ++ LF G + + +P P G G V+F ++A
Sbjct: 366 PESD-TLFVGNLPFSANEDSVQELFGEKGSIVGIRLPTDPDSGRPKGF-GYVQFASVDEA 423
Query: 497 KAAFNSLAYTKFKEVPLYLEWA 518
+ AFNSL + P+ L+++
Sbjct: 424 REAFNSLNGAELDGRPVRLDFS 445
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
E T+++ L++N D + + F CG + S AR + ++ G+ S G+GFV+F T
Sbjct: 318 EDSKTVFVGRLSWNVDNDWLAQEFADCGEVVS---ARVQMDRNTGK--SRGFGFVEFATA 372
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTG---SKILVRNIP 694
E N A+ + +D + L +++ ++ +R++ T S + V N+
Sbjct: 373 EGANAAVALNGQKEIDGRAVNLDKTS----AKPADPERRAKAFGDSTSAPSSVLFVGNVS 428
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
F + + E+F +GE+K VRLP L +G+G+VEF+ AK+A + + +
Sbjct: 429 FDMTEDGLWEVFAEYGEVKSVRLPTDRDTQRL-KGYGYVEFVDVESAKKAFEG-ARGMDV 486
Query: 755 YGRRLVLEWAEEAD 768
GR + L++A+ D
Sbjct: 487 GGRTIRLDYAQPRD 500
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A S +FV N+S+ +TED L ++F +YG + V LP D++T + KG+ V F+ E A +
Sbjct: 417 APSSVLFVGNVSFDMTEDGLWEVFAEYGEVKSVRLPTDRDTQRLKGYGYVEFVDVESAKK 476
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKE 417
A++ G GR + L +P++
Sbjct: 477 AFEGARGMDVGGRTIRLDYAQPRD 500
>gi|407929152|gb|EKG21988.1| MFS pantothenate transporter [Macrophomina phaseolina MS6]
Length = 345
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 9/184 (4%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TLY+ NL + + ED +R+ F + G I T+ R DP LS G+G+V+F +S
Sbjct: 163 TLYVGNLFYQTQEDQLRQEFSRFGNIVKTTIIR--DPAG----LSRGFGYVEFENDDSAA 216
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE 701
A+ + +D ++ ++ R ++E +R V + + + + N+ F+ +
Sbjct: 217 VAIVQMNQRVIDGRRLTVQHHRRREQTEERPRRRNEGRVNPPSKT-LFIGNMSFEMSDRD 275
Query: 702 VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
+ +LF+ + VR+ +G RGF +FI + A +A + L Q LYGRRL +
Sbjct: 276 LNDLFRNIRNVLDVRVAIDR-RTGQPRGFAHADFIDETSATKAKELLSQK-ELYGRRLRV 333
Query: 762 EWAE 765
++ E
Sbjct: 334 DYTE 337
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F+ N+S+ +++ DL LF + +V + ID+ T + +GFA F+ AT+A + L
Sbjct: 262 LFIGNMSFEMSDRDLNDLFRNIRNVLDVRVAIDRRTGQPRGFAHADFIDETSATKAKELL 321
Query: 399 DGTVFLGRMLHL 410
GR L +
Sbjct: 322 SQKELYGRRLRV 333
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 19/149 (12%)
Query: 321 KSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGF 380
K QED QF ++V NL Y ED L + F ++G + + + I ++GF
Sbjct: 146 KQQEDRRQFVASSEGKRTLYVGNLFYQTQEDQLRQEFSRFGNIVKTTI-IRDPAGLSRGF 204
Query: 381 ALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE---------NEGNVD-------- 423
V F + A A ++ V GR L + + +E NEG V+
Sbjct: 205 GYVEFENDDSAAVAIVQMNQRVIDGRRLTVQHHRRREQTEERPRRRNEGRVNPPSKTLFI 264
Query: 424 GKVHCCISERKL-DAFNQVVEARSKRIIL 451
G + +S+R L D F + R+ +
Sbjct: 265 GNMSFEMSDRDLNDLFRNIRNVLDVRVAI 293
>gi|121706512|ref|XP_001271518.1| ribosome biogenesis (Nop4), putative [Aspergillus clavatus NRRL 1]
gi|119399666|gb|EAW10092.1| ribosome biogenesis (Nop4), putative [Aspergillus clavatus NRRL 1]
Length = 735
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 24/223 (10%)
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
E V+E E+ +P TL++++L ++T +S+ +F + I DP++
Sbjct: 30 ETVQE-EKASTQPKRTLFVRSLPASATTESLTEYFSQSYVIKHAIAV--NDPETK---QC 83
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL-------KRSNRNLESEATTV------ 673
GYGFV F E A+K L S+ + +I + + + NL +
Sbjct: 84 KGYGFVTFADLEDAQAAVKELNGSTFEGKKIRVDYAQPRHREIDENLGKSVPSAAAVELK 143
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
K++ A K++VRN+P+ K E + F++FG++KFV LPKK G L GFGF
Sbjct: 144 KQREQQRADTQPPKLIVRNLPWSIKTPEDLAVHFRSFGKVKFVTLPKK--GDQLA-GFGF 200
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRK 775
V K A++A++A+ + GR L ++WA + + E+++K
Sbjct: 201 VVLRGKKNAEKALQAV-NGKEVDGRTLAVDWAVDKETWENLQK 242
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 20/196 (10%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFK-------PLPLASVRTTFL-GMAYIGFKDEKNCNKALN 276
T+ V++LPA + L YF + + T G ++ F D ++ A+
Sbjct: 43 RTLFVRSLPASATTESLTEYFSQSYVIKHAIAVNDPETKQCKGYGFVTFADLEDAQAAVK 102
Query: 277 K-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
+ N S ++GK++ + D + D+N S+ + A K Q + Q A+ +
Sbjct: 103 ELNGSTFEGKKIRV-----DYAQPRHREIDENLGKSVPSAAAVELKKQREQ-QRAD--TQ 154
Query: 336 SGRIFVRNLSYTV-TEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
++ VRNL +++ T +DL F +G + V LP K+ D+ GF V ++A +A
Sbjct: 155 PPKLIVRNLPWSIKTPEDLAVHFRSFGKVKFVTLP--KKGDQLAGFGFVVLRGKKNAEKA 212
Query: 395 YQHLDGTVFLGRMLHL 410
Q ++G GR L +
Sbjct: 213 LQAVNGKEVDGRTLAV 228
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
ED + IF+RNL +T T++ L + F ++GPL + +D ET++ +G V F E
Sbjct: 314 EDERNASTIFIRNLPFTCTDESLYEHFTQFGPLRYARIVVDPETERPRGTGFVCFWKMED 373
Query: 391 A 391
A
Sbjct: 374 A 374
>gi|300708710|ref|XP_002996529.1| hypothetical protein NCER_100368 [Nosema ceranae BRL01]
gi|239605838|gb|EEQ82858.1| hypothetical protein NCER_100368 [Nosema ceranae BRL01]
Length = 399
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
K+L++N+PFQA + ++ +LFK +++ +RLP K G HRGF FV F +K+ ++
Sbjct: 322 KLLIKNVPFQATKKDIADLFKKKYKIQGIRLPIK--RDGTHRGFAFVTFESKSVLDSVIE 379
Query: 747 ALCQSTHLYGRRLVLEWAEE 766
+STHLYGRRLVLE A+E
Sbjct: 380 YFGKSTHLYGRRLVLEIAKE 399
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
IT+EQ++ +F G + D+ + ++G FRR +IGY + + NNTY+F+ +I
Sbjct: 12 ITKEQIEKEFSTFGKIVDLVMLKDSKGNFRRVCYIGYPSNEIRDRVIKKMNNTYLFNHKI 71
Query: 89 KVE 91
VE
Sbjct: 72 NVE 74
>gi|350425556|ref|XP_003494159.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus impatiens]
Length = 914
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 100/182 (54%), Gaps = 13/182 (7%)
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
E +E D E + +++I NL+++++E+ +R K GPI V + R + +S
Sbjct: 661 EQMEIDYVHEVDDKISVFISNLDYSASEEEVRNALKPAGPITMVKMIRSYNGRSK----- 715
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGS 686
GY +VQ ++E++++AL+ L + + + R + N ++ +V + S ++ K +
Sbjct: 716 -GYCYVQLTSKEAVDKALE-LDRVPIRGRPMFVSRCDPN-KTTRESVFKYSCSLEK---N 769
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
K+ V+ +P + ++EE+FK G LK VR+ +G +G +VEF+ +N A +A+
Sbjct: 770 KLFVKGLPVSTTKEDLEEIFKVHGSLKEVRIV--TYRNGHSKGLAYVEFVDENSAGKALL 827
Query: 747 AL 748
A+
Sbjct: 828 AI 829
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 24/188 (12%)
Query: 322 SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFA 381
S++ + + ++ + +F+ NL Y+ +E+++ + GP+ V + I ++KG+
Sbjct: 660 SEQMEIDYVHEVDDKISVFISNLDYSASEEEVRNALKPAGPITMVKM-IRSYNGRSKGYC 718
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQV 441
V E +A + LD GR + + P + K C + + KL
Sbjct: 719 YVQLTSKEAVDKALE-LDRVPIRGRPMFVSRCDPNKTTRESVFKYSCSLEKNKL------ 771
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY------GITGLVEFLQKNQ 495
VK LP T DL+ +F+ G L V + Y G+ VEF+ +N
Sbjct: 772 ---------FVKGLPVSTTKEDLEEIFKVHGSLKEVRIVTYRNGHSKGL-AYVEFVDENS 821
Query: 496 AKAAFNSL 503
A A ++
Sbjct: 822 AGKALLAI 829
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E ++FV+ L + T++DL ++F+ +G L EV + + +KG A V F+ A +A
Sbjct: 767 EKNKLFVKGLPVSTTKEDLEEIFKVHGSLKEVRI-VTYRNGHSKGLAYVEFVDENSAGKA 825
Query: 395 YQHLDGTVFLGRMLHLIPGKPKE 417
+DG +++ + +P E
Sbjct: 826 LLAIDGMKIGDKIISVAISQPPE 848
>gi|334183839|ref|NP_177322.2| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|334183841|ref|NP_001185373.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|322510110|sp|Q05196.3|PABP5_ARATH RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|332197109|gb|AEE35230.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|332197110|gb|AEE35231.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
Length = 682
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 170/422 (40%), Gaps = 92/422 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +V E L LF + P+ + + D T ++ G+A V F PE A++A + L
Sbjct: 61 LYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESL 119
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ R + ++ +S R + K + +KNL
Sbjct: 120 NYAPIRDRPIRIM------------------LSNR-----DPSTRLSGKGNVFIKNL--- 153
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL+E F G +L + G V+F ++ A+AA + L +
Sbjct: 154 DASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLND 213
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+++ G F +++++ E G VP
Sbjct: 214 KQVFV-----GHFVRRQDRAR-------SESG------------------AVPSF----- 238
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
T +Y+KNL T+D +++ F K G I+S V + + S +G
Sbjct: 239 ----------TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN------SRSFG 282
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGS 686
FV F + E+ A++ + SL E + + K+S+R E + + S K GS
Sbjct: 283 FVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGS 342
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+ ++N+ +++E+F +G + ++ M GL RGFGFV + EA AMK
Sbjct: 343 NLYLKNLDDSVNDEKLKEMFSEYGNVTSCKV--MMNSQGLSRGFGFVAYSNPEEALLAMK 400
Query: 747 AL 748
+
Sbjct: 401 EM 402
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 85/425 (20%), Positives = 156/425 (36%), Gaps = 110/425 (25%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG AY+ F + ++ ++A+ N + + + + I ++D S + SG
Sbjct: 99 LGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSG-------------- 144
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
G +F++NL ++ L + F +G + + +D +
Sbjct: 145 -------------------KGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGR 184
Query: 377 TKGFALVTFLMPEHATQAYQHLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCI 430
+KG+ V F E A A L+G VF+G H +
Sbjct: 185 SKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVG---HFV------------------- 222
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV--PPYGIT--- 485
R+ A ++ S + VKNLP +LK F +GD+ +V G +
Sbjct: 223 -RRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSF 281
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG 545
G V F+ A A + E LY+ G+ ++K++ E E
Sbjct: 282 GFVNFVSPEAAAVAVEKMNGISLGEDVLYV----------------GRAQKKSDREEELR 325
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
+ ++E + + QG + LY+KNL+ + ++ ++ F + G
Sbjct: 326 RKFEQERISRFEKLQG-------------------SNLYLKNLDDSVNDEKLKEMFSEYG 366
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRN 665
+ S V Q LS G+GFV + E A+K + + + + + R
Sbjct: 367 NVTSCKVMMNS------QGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRK 420
Query: 666 LESEA 670
E +A
Sbjct: 421 EERQA 425
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 217 APVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALN 276
AP+ R ++ P+ + K L AS+ L + F +C A++
Sbjct: 122 APIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLD-ASIDNKALYETFSSFGTILSCKVAMD 180
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK---AKHWKSQEDSVQFAEDI 333
+ K ++ K+ +A+ AA D N + N K H+ ++D +
Sbjct: 181 ---VVGRSKGYGFVQFEKEETAQ---AAIDKLNGMLLNDKQVFVGHFVRRQDRAR----- 229
Query: 334 AESG------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
+ESG ++V+NL +T+D+L K F KYG ++ ++ + ++ ++ F V F+
Sbjct: 230 SESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVV-MKDQSGNSRSFGFVNFVS 288
Query: 388 PEHATQAYQHLDG------TVFLGR 406
PE A A + ++G +++GR
Sbjct: 289 PEAAAVAVEKMNGISLGEDVLYVGR 313
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
+ EE E EP TL++ L++N ++ ++R F++ G + S AR +S G+ S
Sbjct: 168 QKTEETPEASEEP-ATLFVGRLSWNVDDEWLKREFEEAGGVIS---ARVMIERSTGK--S 221
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK-RKSSNVAKQTG 685
GYG+V F ++ + +AL LQ +D + L S ++ A+ + +K +V
Sbjct: 222 RGYGYVDFSSKAAAEKALNELQGKEIDGRPVNLDMSTGKPKTPASNDRAKKFGDVPSAPS 281
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ + N+ F +++++ E+F +G + RLP + +GFG+V+F + EA+ A+
Sbjct: 282 DTLFIGNLSFNTERNKLFEIFGEYGTVVSCRLP-THPDTQQPKGFGYVQFSSVEEAQNAL 340
Query: 746 KALCQSTHLYGRRLVLEWAEEADN 769
+L +L GR L+++ DN
Sbjct: 341 NSL-NGEYLDGRPCRLDFSTPRDN 363
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 21/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G Y+ F + KALN+ +GK+++ N M K K
Sbjct: 223 GYGYVDFSSKAAAEKALNE----LQGKEIDGRPV----------------NLDMSTGKPK 262
Query: 319 HWKSQEDSVQFAE-DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
S + + +F + A S +F+ NLS+ + L ++F +YG + LP +T +
Sbjct: 263 TPASNDRAKKFGDVPSAPSDTLFIGNLSFNTERNKLFEIFGEYGTVVSCRLPTHPDTQQP 322
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
KGF V F E A A L+G GR L P++N
Sbjct: 323 KGFGYVQFSSVEEAQNALNSLNGEYLDGRPCRLDFSTPRDN 363
>gi|255945691|ref|XP_002563613.1| Pc20g11240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588348|emb|CAP86453.1| Pc20g11240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 356
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 93/188 (49%), Gaps = 18/188 (9%)
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
P P +TLY+ NL F+ T + +R+HF+K G + + + + LS G+G+V F T
Sbjct: 117 PVPKSTLYVGNLFFDVTAEDLRKHFEKYGAVENALIVHD------ARGLSKGFGYVTFST 170
Query: 637 RESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
E QA+ L+ ++ ++ SN TT + + N +T + + N+P++
Sbjct: 171 VEEATQAITQQHGGILEGREVVVQFSN-------TTYRAMAENKPSKT---LYIGNLPYE 220
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
++++L + VR+P +GL RGF ++F+ ++ A K L YG
Sbjct: 221 LTDQDLQDLIADLHGVTDVRIPVDR-RTGLPRGFAHIDFLEQSNATHG-KELLSRKEPYG 278
Query: 757 RRLVLEWA 764
R+L + +A
Sbjct: 279 RKLFVNFA 286
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 29/239 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NL + VT +DL K FEKYG + ++ + +KGF VTF E ATQA
Sbjct: 123 LYVGNLFFDVTAEDLRKHFEKYGAVENALI-VHDARGLSKGFGYVTFSTVEEATQAITQQ 181
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
G + GR + + + + + E + + + + NLPY
Sbjct: 182 HGGILEGREV---------------------VVQFSNTTYRAMAENKPSKTLYIGNLPYE 220
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAFNSLAYTKFKEVP 512
DL+ L + V +P TGL ++FL+++ A L+ +
Sbjct: 221 LTDQDLQDLIADLHGVTDVRIPVDRRTGLPRGFAHIDFLEQSNATHGKELLSRKEPYGRK 280
Query: 513 LYLEWAPEGVFA-EAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
L++ +A V + E ++ + K+ EK + G+ + K E + V E+ E E
Sbjct: 281 LFVNFARRKVLSPEDFQRYQQKKLEKKKSSGQTLDVRKGSELREVREVREVNEIGEGSE 339
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 85/205 (41%), Gaps = 42/205 (20%)
Query: 212 PPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK-------PLPLASVRTTFLGMAYIG 264
P +++ PV K T+ V NL V +DL+ +F+ L + R G Y+
Sbjct: 111 PLLNEGPVPK---STLYVGNLFFDVTAEDLRKHFEKYGAVENALIVHDARGLSKGFGYVT 167
Query: 265 FKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
F + +A+ + + +G+++ + ++S + Y A++ + ++
Sbjct: 168 FSTVEEATQAITQQHGGILEGREV-VVQFS---NTTYRAMAENKPSKTL----------- 212
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
++ NL Y +T+ DL L + +V +P+D+ T +GFA +
Sbjct: 213 ----------------YIGNLPYELTDQDLQDLIADLHGVTDVRIPVDRRTGLPRGFAHI 256
Query: 384 TFLMPEHATQAYQHLDGTVFLGRML 408
FL +AT + L GR L
Sbjct: 257 DFLEQSNATHGKELLSRKEPYGRKL 281
>gi|443319940|ref|ZP_21049081.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442790348|gb|ELR99940.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 98
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT+++L ++FE YG + V LP D ET K +GF V E A + L
Sbjct: 3 IYVGNLSYNVTQEELKEVFEDYGKVKRVYLPTDPETGKLRGFGFVEMETDEQEDAAIETL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR + + KP+EN G+ G
Sbjct: 63 DGAEWMGREMRVNKAKPRENRGDSGG 88
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ + Q E++E+F+ +G++K V LP +G RGFGFVE T + A++
Sbjct: 3 IYVGNLSYNVTQEELKEVFEDYGKVKRVYLPTDPE-TGKLRGFGFVEMETDEQEDAAIET 61
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRKRTNR 779
L GR + + A+ +N D NR
Sbjct: 62 L-DGAEWMGREMRVNKAKPRENRGDSGGGGNR 92
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTE-GKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y +TQE+LK FE+ G V V L E GK R F F+ ++Q AA++ +
Sbjct: 10 YNVTQEELKEVFEDYGKVKRVYLPTDPETGKLRGFGFVEMETDEQEDAAIETLDGAEWMG 69
Query: 86 SRIKVEKC---SNLGDT 99
++V K N GD+
Sbjct: 70 REMRVNKAKPRENRGDS 86
>gi|85117951|ref|XP_965346.1| hypothetical protein NCU02959 [Neurospora crassa OR74A]
gi|28927154|gb|EAA36110.1| hypothetical protein NCU02959 [Neurospora crassa OR74A]
Length = 606
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 21/192 (10%)
Query: 580 DTT----LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
DTT +++N+ F++TE+ ++ F+K G + V +AR DP+ LS GYGFV F
Sbjct: 345 DTTEGHAAFVRNIVFDATEEHLKGAFEKFGNVTDVFLAR--DPRG----LSKGYGFVTFA 398
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
TRE+L +A + S +I ++E V R S+ + + + + NIP+
Sbjct: 399 TREALEEACSQVDGSFWHGRRI-------SVEPRRAKVNRGSA--VGEPSACLFIGNIPY 449
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
+ +E+ +F LK VR+ +G RGF +F+ A A++ L Q T L
Sbjct: 450 ETTDAELNNIFVGIDGLKDVRVAVDRA-TGWPRGFAHADFVDVEAAVNALEKL-QGTQLG 507
Query: 756 GRRLVLEWAEEA 767
R + +++A+ A
Sbjct: 508 ERTIKIDYAQPA 519
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 28/225 (12%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D E FVRN+ + TE+ L FEK+G + +V L D +KG+ VTF E
Sbjct: 345 DTTEGHAAFVRNIVFDATEEHLKGAFEKFGNVTDVFLARDPR-GLSKGYGFVTFATREAL 403
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
+A +DG+ + GR + + P + K N G+ G+ C +
Sbjct: 404 EEACSQVDGSFWHGRRISVEPRRAKVNRGSAVGEPSAC--------------------LF 443
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAFNSLAY 505
+ N+PY T +L +F L V V TG +F+ A A L
Sbjct: 444 IGNIPYETTDAELNNIFVGIDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNALEKLQG 503
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
T+ E + +++A + +E + G+ +E + +G+ + +
Sbjct: 504 TQLGERTIKIDYAQPAAARQPRE-NNGERREYRPRQQRDGQRDGQ 547
>gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 97/228 (42%), Gaps = 17/228 (7%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E GRI+V NL YT T +LT F + G + +V + DK TD+++GFA VT E A +A
Sbjct: 106 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKA 165
Query: 395 YQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
Q +G + GR + + P P+ E V S R +D V A
Sbjct: 166 VQMFNGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVDDGTYKVYA--------G 217
Query: 454 NLPYRTLPTDLKALFEPFGDL--GRVLVP-----PYGITGLVEFLQKNQAKAAFNSLAYT 506
NL + LK FE L RV+ G G V F AKAA ++
Sbjct: 218 NLGWGVRADALKTAFEGQPGLVGARVIFERDTGRSRGF-GFVSFHTIQDAKAALQAMDGV 276
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTA 554
+ PL L A + A + + ++EK G E E + NT+
Sbjct: 277 ELDGRPLRLSLAAQNPPAGSTPSTAQSQQEKTASRGSEAEPQVDNNTS 324
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 13/189 (6%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+Y+ NL + T + F + G + V + K S G+ FV T E +
Sbjct: 110 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDR-----SRGFAFVTMATAEEAAK 164
Query: 643 ALKVLQNSSLDEHQI-----ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
A+++ + L + E+ R + V R S V K+ N+ +
Sbjct: 165 AVQMFNGALLGGRTVRVNFPEVPRGGER-AVASAAVARTSLRVVDDGTYKVYAGNLGWGV 223
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ ++ F+ L R+ + +G RGFGFV F T +AK A++A+ L GR
Sbjct: 224 RADALKTAFEGQPGLVGARVIFER-DTGRSRGFGFVSFHTIQDAKAALQAM-DGVELDGR 281
Query: 758 RLVLEWAEE 766
L L A +
Sbjct: 282 PLRLSLAAQ 290
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 166/425 (39%), Gaps = 100/425 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VT+ L +F + G + V + D T ++ G+ V + P+ A +A L
Sbjct: 39 LYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALDIL 98
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T F + + ++ H S RK N I +KNL +
Sbjct: 99 NFTPFNNKPIRIM-------------YSHRDPSIRKSGTGN----------IFIKNLD-K 134
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
T+ D KAL + F G +L G V+F + A+ A + L +
Sbjct: 135 TI--DHKALHDTFSSFGNILSCKVATDSSGQSRGYGFVQFDNEEAAQNAIDKLNGMLLND 192
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G F E+ K+ N
Sbjct: 193 KQVYV-----GHFLRKHERDSASNKKFN-------------------------------- 215
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
+Y+KNL+ ++TE+ ++ F + G I S + R D K S +G
Sbjct: 216 -----------NVYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGK------SKCFG 258
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGS 686
FV F ++ +A++ L +D+ + + K+S R LE ++ + V K G
Sbjct: 259 FVNFENTDAAAKAVESLNGKKIDDKEWYVGKAQKKSERELELKSQFEQSMKEAVDKYQGV 318
Query: 687 KILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ ++N+ ++ELF FG + K +R P SG+ RG GFV F T EA R
Sbjct: 319 NLYIKNLDDSISDENLKELFSDFGMITSCKVMRDP-----SGISRGSGFVAFSTPEEASR 373
Query: 744 AMKAL 748
A+ +
Sbjct: 374 ALAEM 378
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
P T+LY+ +L+ N T+ + F + G + SV V R + S+GYG+V + +
Sbjct: 33 PYMPTSLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRR-----SLGYGYVNYTS 87
Query: 637 RESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
+ +AL +L + + I + S+R+ ++ K I ++N+
Sbjct: 88 PQDAARALDILNFTPFNNKPIRIMYSHRD------------PSIRKSGTGNIFIKNLDKT 135
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F +FG + ++ SG RG+GFV+F + A+ A+ L
Sbjct: 136 IDHKALHDTFSSFGNILSCKVATD--SSGQSRGYGFVQFDNEEAAQNAIDKL 185
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 126/320 (39%), Gaps = 79/320 (24%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+G IF++NL T+ L F +G + + D + +++G+ V F E A A
Sbjct: 124 TGNIFIKNLDKTIDHKALHDTFSSFGNILSCKVATD-SSGQSRGYGFVQFDNEEAAQNAI 182
Query: 396 QHLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
L+G V++G L +++E + S +K FN V
Sbjct: 183 DKLNGMLLNDKQVYVGHFL-------RKHERD-------SASNKK---FNNV-------- 217
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYG-----ITGLVEFLQKNQAKAAFNSLA 504
VKNL T DLK +F +G++ ++ G V F + A A SL
Sbjct: 218 -YVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGKSKCFGFVNFENTDAAAKAVESLN 276
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
K + KE GK ++K+E E E + ++ D QGV
Sbjct: 277 GKKIDD----------------KEWYVGKAQKKSERELELKSQFEQSMKEAVDKYQGV-- 318
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
LYIKNL+ + ++++++ F G I S V R DP
Sbjct: 319 -----------------NLYIKNLDDSISDENLKELFSDFGMITSCKVMR--DPSG---- 355
Query: 625 LSMGYGFVQFYTRESLNQAL 644
+S G GFV F T E ++AL
Sbjct: 356 ISRGSGFVAFSTPEEASRAL 375
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NLS + TE+DL +F +YG + ++ D + K+K F V F + A +A + L
Sbjct: 217 VYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDAD-GKSKCFGFVNFENTDAAAKAVESL 275
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-------IL 451
+G + ++ GK ++ SER+L+ +Q ++ + + +
Sbjct: 276 NGKKIDDKEWYV--GKAQKK------------SERELELKSQFEQSMKEAVDKYQGVNLY 321
Query: 452 VKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYT 506
+KNL +LK LF FG + +V+ P GI +G V F +A A +
Sbjct: 322 IKNLDDSISDENLKELFSDFGMITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMNGK 381
Query: 507 KFKEVPLYLEWA 518
PLY+ A
Sbjct: 382 MVVSKPLYVALA 393
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 96/201 (47%), Gaps = 20/201 (9%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYF---KPLPLASVRTTFLGMA-YIGFKDEKNCNKALNK 277
++++ + VKNL ++DLK F + A + G + GF + +N + A
Sbjct: 212 KKFNNVYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGKSKCFGFVNFENTDAAAKA 271
Query: 278 NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ-EDSVQFAEDIAES 336
+S GK++ D+ Y G A + +E KSQ E S++ A D +
Sbjct: 272 VESL-NGKKI-------DDKEWYVGKAQKKSERELE------LKSQFEQSMKEAVDKYQG 317
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
++++NL ++++++L +LF +G + + D + ++G V F PE A++A
Sbjct: 318 VNLYIKNLDDSISDENLKELFSDFGMITSCKVMRDP-SGISRGSGFVAFSTPEEASRALA 376
Query: 397 HLDGTVFLGRMLHLIPGKPKE 417
++G + + + L++ + KE
Sbjct: 377 EMNGKMVVSKPLYVALAQRKE 397
>gi|400597074|gb|EJP64818.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 769
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 24/235 (10%)
Query: 552 NTAEEDNQQGVPEVEENVEEDEERE----PEPD-------TTLYIKNLNFNSTEDSIRRH 600
+ AEE ++ PE+EE + + E P P +L++++L N T +S+
Sbjct: 2 SVAEESKKRLRPEIEEALAAMPDSETVAAPAPKKARTEERRSLFVRSLPPNVTNESLAEF 61
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
F + P+ TV + K S G+GFV + QA V ++ I ++
Sbjct: 62 FSEYFPVKHATVVIDQQTKE-----SRGFGFVTLADADDAKQAQIVFDKKRWEDRTIRVE 116
Query: 661 RSNRNLESEATTVKRKSSNVAK---QTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVR 716
+ EAT + K + K++VRN+P+ + SE + LF+++G++KF
Sbjct: 117 VAEPRQRKEATEGAQPRQKPGKPEFEPTPKLIVRNLPWSIRNSEQLGHLFRSYGKVKFAD 176
Query: 717 LPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVE 771
LPK G +GFGFV K A++A++ + + GR L ++WA + D E
Sbjct: 177 LPK---NKGKLKGFGFVTLRGKKNAEKALEGI-NGKEIDGRTLAVDWAVDKDTWE 227
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L VT + L + F +Y P+ + ID++T +++GF VT + A QA
Sbjct: 44 LFVRSLPPNVTNESLAEFFSEYFPVKHATVVIDQQTKESRGFGFVTLADADDAKQAQIVF 103
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
D + R + + +P++ + +G ++ + E K ++V+NLP+
Sbjct: 104 DKKRWEDRTIRVEVAEPRQRKEATEG------AQPRQKPGKPEFEPTPK--LIVRNLPWS 155
Query: 459 TLPTD-LKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
++ L LF +G + +P G V K A+ A + + L
Sbjct: 156 IRNSEQLGHLFRSYGKVKFADLPKNKGKLKGFGFVTLRGKKNAEKALEGINGKEIDGRTL 215
Query: 514 YLEWAPEGVFAEAKEKSKGKEKEKNEEE 541
++WA + E ++ +GKE E +++
Sbjct: 216 AVDWAVDKDTWEQRQAGEGKEGESGDDQ 243
>gi|159163839|pdb|2CPF|A Chain A, Solution Structure Of The Penultimate Rna Recognition
Motif Of Hypothetical Rna-Binding Protein Rbm19
Length = 98
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
+ L+IKNLNF++TE++++ F K G I S T+++KK+ G LSMG+GFV++ E
Sbjct: 5 SSGLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNK--AGVLLSMGFGFVEYKKPEQ 62
Query: 640 LNQALKVLQNSSLDEHQIELKRSNR 664
+ALK LQ ++D H++E++ S R
Sbjct: 63 AQKALKQLQGHTVDGHKLEVRISER 87
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK-----TKGFALVTFLMPEH 390
S +F++NL+++ TE+ L +F K G + I K+ +K + GF V + PE
Sbjct: 5 SSGLFIKNLNFSTTEETLKGVFSKVGAIKSCT--ISKKKNKAGVLLSMGFGFVEYKKPEQ 62
Query: 391 ATQAYQHLDGTVFLGRMLHL 410
A +A + L G G L +
Sbjct: 63 AQKALKQLQGHTVDGHKLEV 82
>gi|444721742|gb|ELW62457.1| Polyadenylate-binding protein 4-like protein [Tupaia chinensis]
Length = 370
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 165/418 (39%), Gaps = 91/418 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +LS VTED L K F GP+ + + D T ++ G+A V FL A +A +
Sbjct: 12 LYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDTM 71
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ + G+ + L+ + C+ RK N + +KNL
Sbjct: 72 NFDMIKGKSIRLMWSQR-----------DACL--RKSGIGN----------VFIKNLDR- 107
Query: 459 TLPTDLKALFEPFGDLGRVLVPPY-----GITG--LVEFLQKNQAKAAFNSLAYTKFKEV 511
D K L+E F G++L G G V F ++ A A + K+
Sbjct: 108 --SIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKDC 165
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
+++ G+ K + + E E N A E
Sbjct: 166 KVFV----------------GRFKNRKDREAE------LRNKASEF-------------- 189
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
T +YIKN + ++ +R F K G SV V DP S G+GF
Sbjct: 190 ---------TNVYIKNFGDDMDDERLREVFSKYGKTLSVKVM--TDPSGK----SKGFGF 234
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV----KRKSSNVAKQTGSK 687
V F E+ +A++ + ++ I + R+ + +E +A ++K + K G K
Sbjct: 235 VSFDNHEAAQKAVEEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQQKRERIRKCQGVK 294
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ ++N+ ++ + F +FG + V++ M G +GFG + F + EA +AM
Sbjct: 295 LYIKNLDDTIDDEKLRKEFSSFGSISRVKV---MQEEGQSKGFGLICFSSPEEATKAM 349
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L+ + TED + + F GP+ S+ + R + S+GY +V F
Sbjct: 10 ASLYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRR-----SLGYAYVNFLQLADA 64
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL + + I L S R+ + + K + ++N+
Sbjct: 65 QKALDTMNFDMIKGKSIRLMWSQRD------------ACLRKSGIGNVFIKNLDRSIDNK 112
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ E F AFG++ ++ GS +G+ FV F ++ A RA++ +
Sbjct: 113 TLYEHFSAFGKILSSKVMSDDQGS---KGYAFVHFQNQSAADRAIEEM 157
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
+++++NL T+ ++ L K F +G ++ V + +E ++KGF L+ F PE AT+A
Sbjct: 294 KLYIKNLDDTIDDEKLRKEFSSFGSISRV--KVMQEEGQSKGFGLICFSSPEEATKAMTE 351
Query: 398 LDGTVFLGRMLHL 410
++G + + L++
Sbjct: 352 MNGQILGSKPLNI 364
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ HF G I S V D + S GY FV F + + ++
Sbjct: 100 VFIKNLDRSIDNKTLYEHFSAFGKILSSKVM--SDDQG-----SKGYAFVHFQNQSAADR 152
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L + ++ + R + EA ++ K+S + + ++N +
Sbjct: 153 AIEEMNGKLLKDCKVFVGRFKNRKDREAE-LRNKASEF-----TNVYIKNFGDDMDDERL 206
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
E+F +G+ V++ SG +GFGFV F A++A++ +
Sbjct: 207 REVFSKYGKTLSVKVMTD--PSGKSKGFGFVSFDNHEAAQKAVEEM 250
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 38/251 (15%)
Query: 251 ASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAK-YSGAADDNNN 309
A +R + +G +I D NK L ++ S + GK L+ S D +K Y+ N +
Sbjct: 90 ACLRKSGIGNVFIKNLDRSIDNKTLYEHFSAF-GKILSSKVMSDDQGSKGYAFVHFQNQS 148
Query: 310 ASMENIKAKHWKSQEDSVQFA--------------EDIAESGRIFVRNLSYTVTEDDLTK 355
A+ I+ + K +D F +E ++++N + ++ L +
Sbjct: 149 AADRAIEEMNGKLLKDCKVFVGRFKNRKDREAELRNKASEFTNVYIKNFGDDMDDERLRE 208
Query: 356 LFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKP 415
+F KYG V + D + K+KGF V+F E A +A + ++G G+++ +
Sbjct: 209 VFSKYGKTLSVKVMTD-PSGKSKGFGFVSFDNHEAAQKAVEEMNGKDINGQLIFV----- 262
Query: 416 KENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-------ILVKNLPYRTLPTDLKALF 468
G KV ER+ + + + +RI + +KNL L+ F
Sbjct: 263 ----GRAQKKV-----ERQAELKQMFEQQKRERIRKCQGVKLYIKNLDDTIDDEKLRKEF 313
Query: 469 EPFGDLGRVLV 479
FG + RV V
Sbjct: 314 SSFGSISRVKV 324
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 163/424 (38%), Gaps = 93/424 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + DK T ++ G+A V + P A +A + L
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETL 72
Query: 399 DGTVFLGRMLHLIPGK--PKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
+ V GR + ++ + P + V G V I +KNL
Sbjct: 73 NFDVIKGRPVRIMWSQRDPSLRKSGVGGGVGN---------------------IFIKNL- 110
Query: 457 YRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYTKFK 509
D KAL++ F G +L G V F + A+ A +
Sbjct: 111 --DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM------ 162
Query: 510 EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
G+ ++ G+ K + E E E G K+
Sbjct: 163 ----------NGMLLNDRKVFVGRFKSRKEREAELGARAKE------------------- 193
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
T +YIKN + ++ ++ F K GP SV V + K S G+
Sbjct: 194 ----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK------SKGF 237
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVAKQT 684
GFV F E +A+ + L+ QI + R+ + +E + T +KR K + +
Sbjct: 238 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRITRYQ 296
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA +A
Sbjct: 297 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEATKA 353
Query: 745 MKAL 748
+ +
Sbjct: 354 VTEM 357
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 16/170 (9%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ + R K + S+GY +V +
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRR-----SLGYAYVNYQQPV 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL+ L + + + S R+ + S V G+ I ++N+
Sbjct: 64 DAKRALETLNFDVIKGRPVRIMWSQRD-------PSLRKSGVGGGVGN-IFIKNLDKSID 115
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 116 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 162
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 105 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 157
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 158 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 211
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
++LF FG V++ M SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 212 KDLFGKFGPALSVKV---MTDESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 267
Query: 762 EWAEE 766
A++
Sbjct: 268 GRAQK 272
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 236 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 283
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 284 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 335
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 336 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 376
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 26/191 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++++N + ++ L LF K+GP V + D E+ K+KGF V+F E A +A +
Sbjct: 197 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEM 255
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA---FNQVVEARSKRI----IL 451
+G G+ +++ G KV ER+ + F Q+ + R R +
Sbjct: 256 NGKELNGKQIYV---------GRAQKKV-----ERQTELKRKFEQMKQDRITRYQGVNLY 301
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTK 507
VKNL L+ F PFG + V G G V F +A A +
Sbjct: 302 VKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 361
Query: 508 FKEVPLYLEWA 518
PLY+ A
Sbjct: 362 VATKPLYVALA 372
>gi|119488026|ref|ZP_01621470.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119455315|gb|EAW36454.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL+Y VTE+DL +F +YG + V +P D+ET + +GFA V A + L
Sbjct: 3 IYVGNLAYEVTEEDLKSVFAEYGAVQRVSIPTDRETGRPRGFAFVEMGAESEEDAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR L + KP+EN+G+ G
Sbjct: 63 DGAEWMGRDLKVNKAKPRENKGSFGG 88
>gi|67920522|ref|ZP_00514042.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416377747|ref|ZP_11683649.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67858006|gb|EAM53245.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357266170|gb|EHJ14837.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V N+SY VT +DLT++F YG + V LP D+ET K +GF V + T A + L
Sbjct: 3 IYVGNISYDVTPEDLTEVFGDYGTVKRVSLPTDRETGKPRGFGFVEMDNDDEETAAIEEL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG +LGR + + KP+EN+G
Sbjct: 63 DGAEWLGRQMRVNKAKPRENKGG 85
>gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 96/227 (42%), Gaps = 17/227 (7%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E GRI+V NL YT T +LT F + G + +V + DK TD+++GFA VT E A +A
Sbjct: 106 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKA 165
Query: 395 YQHLDGTVFLGRMLHL-IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
Q +G + GR + + P P+ E V S R +D V A
Sbjct: 166 VQMFNGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVDDGTYKVYA--------G 217
Query: 454 NLPYRTLPTDLKALFEPFGDL--GRVLVP-----PYGITGLVEFLQKNQAKAAFNSLAYT 506
NL + LK FE L RV+ G G V F AKAA ++
Sbjct: 218 NLGWGVRADALKTAFEGQPGLVGARVIFERDTGRSRGF-GFVSFHTIQDAKAALQAMDGV 276
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENT 553
+ PL L A + A + + ++EK G E E + NT
Sbjct: 277 ELDGRPLRLSLAAQNPPAGSTPSTAQSQQEKTASRGSEAEPQVDNNT 323
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 13/189 (6%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+Y+ NL + T + F + G + V + K S G+ FV T E +
Sbjct: 110 IYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDR-----SRGFAFVTMATAEEAAK 164
Query: 643 ALKVLQNSSLDEHQI-----ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
A+++ + L + E+ R + V R S V K+ N+ +
Sbjct: 165 AVQMFNGALLGGRTVRVNFPEVPRGGER-AVASAAVARTSLRVVDDGTYKVYAGNLGWGV 223
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ ++ F+ L R+ + +G RGFGFV F T +AK A++A+ L GR
Sbjct: 224 RADALKTAFEGQPGLVGARVIFER-DTGRSRGFGFVSFHTIQDAKAALQAM-DGVELDGR 281
Query: 758 RLVLEWAEE 766
L L A +
Sbjct: 282 PLRLSLAAQ 290
>gi|440793396|gb|ELR14581.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 964
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 153/358 (42%), Gaps = 76/358 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----------GLVEFLQKNQAKAA 499
I ++NL T DL+ LF G + R V IT G V+F+ ++ A AA
Sbjct: 37 IFLRNLSEDTTSMDLEELFSDVGPIRRAFV----ITKKGERKCSGQGYVQFVMESDAAAA 92
Query: 500 FNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE------KEKNEEEG---EEGEEEKK 550
+ FK + +E A V E KEK + K+ +E ++EG ++G + K
Sbjct: 93 VRQYSGKPFKGSRVLIEVAKPRVRDE-KEKRQPKKPVEEVKQEDQDDEGALKDDGYDITK 151
Query: 551 ENTAEEDNQQGVP-----------EVEENVEEDEEREPEP-------------DTTLYIK 586
E+ ++ + VP + E+R+P P + +
Sbjct: 152 EDEIGKNEPKPVPTPVAKPIAKPVAKPAPPPKREQRKPAPAPLPKREPPPKVEKKVVIVS 211
Query: 587 NLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKV 646
L + E ++ + +K GPI S+T K+ + V+F + +A K
Sbjct: 212 GLPTSVDEKALEKVLRKYGPITSITYPLGKE--------NTVIAHVEFKDAKFAERASKK 263
Query: 647 LQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELF 706
N L + I +S ++ ++++RN+PFQA ++++ E F
Sbjct: 264 CVNVPLGDRTIS------------------ASFKPEKRDGRLIIRNLPFQATEADLSEKF 305
Query: 707 KAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
A G+L V +PK +G RGFGFVEF TK EA A++ + + + GRR+ ++W
Sbjct: 306 AAHGKLVDVIIPKNK-ETGNPRGFGFVEFFTKEEAANALEKV-NAQPIRGRRVAVDWC 361
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 46/209 (22%)
Query: 209 PSVPPVSKA-PVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLG-----MA 261
P+ P+ K P K + ++V LP V +K L+ + P+ S+ T LG +A
Sbjct: 189 PAPAPLPKREPPPKVEKKVVIVSGLPTSVDEKALEKVLRKYGPITSI-TYPLGKENTVIA 247
Query: 262 YIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWK 321
++ FKD K +A K +N+ + SA + D
Sbjct: 248 HVEFKDAKFAERASKKC--------VNVPLGDRTISASFKPEKRD--------------- 284
Query: 322 SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFA 381
GR+ +RNL + TE DL++ F +G L +VI+P +KET +GF
Sbjct: 285 ---------------GRLIIRNLPFQATEADLSEKFAAHGKLVDVIIPKNKETGNPRGFG 329
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
V F E A A + ++ GR + +
Sbjct: 330 FVEFFTKEEAANALEKVNAQPIRGRRVAV 358
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
+IF+RNLS T DL +LF GP+ + K K G V F+M A A +
Sbjct: 36 KIFLRNLSEDTTSMDLEELFSDVGPIRRAFVITKKGERKCSGQGYVQFVMESDAAAAVRQ 95
Query: 398 LDGTVFLGRMLHLIPGKPK 416
G F G + + KP+
Sbjct: 96 YSGKPFKGSRVLIEVAKPR 114
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 667 ESEATTVKRKSSNVAK-QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 725
E + TV KS A+ + G+ + +RN+PF A ++ F FG +++ L K V +G
Sbjct: 472 EDDDDTVPVKSEAPAEVEAGTTLFIRNLPFGATVQDLRAKFAEFGRIRYCALVKDKV-TG 530
Query: 726 LHRGFGFVEFITKNEA 741
+ RG F++F K A
Sbjct: 531 MARGSAFLQFAEKASA 546
>gi|350295431|gb|EGZ76408.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 601
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 21/192 (10%)
Query: 580 DTT----LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
DTT +++N+ F++TE+ ++ F+K G + V +AR DP+ LS GYGFV F
Sbjct: 345 DTTEGHAAFVRNIVFDATEEHLKGAFEKFGNVTDVFLAR--DPRG----LSKGYGFVTFA 398
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
TRE+L +A + S +I ++E V R S+ + + + + NIP+
Sbjct: 399 TREALEEACSQVDGSFWHGRRI-------SVEPRRAKVNRGSA--VGEPSACLFIGNIPY 449
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
+ +E+ +F LK VR+ +G RGF +F+ A A++ L Q T L
Sbjct: 450 ETTDAELNSIFVGVDGLKDVRVAVDRA-TGWPRGFAHADFVDVEAAVNALEKL-QGTQLG 507
Query: 756 GRRLVLEWAEEA 767
R + +++A+ A
Sbjct: 508 ERTIKIDYAQPA 519
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 28/236 (11%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D E FVRN+ + TE+ L FEK+G + +V L D +KG+ VTF E
Sbjct: 345 DTTEGHAAFVRNIVFDATEEHLKGAFEKFGNVTDVFLARDPR-GLSKGYGFVTFATREAL 403
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
+A +DG+ + GR + + P + K N G+ G+ C +
Sbjct: 404 EEACSQVDGSFWHGRRISVEPRRAKVNRGSAVGEPSAC--------------------LF 443
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAFNSLAY 505
+ N+PY T +L ++F L V V TG +F+ A A L
Sbjct: 444 IGNIPYETTDAELNSIFVGVDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNALEKLQG 503
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQG 561
T+ E + +++A + +E + G+ +E + +G+ + + + N+ G
Sbjct: 504 TQLGERTIKIDYAQPAAARQPRE-NNGERREYRPRQQRDGQRDGQRDGQRSYNRDG 558
>gi|354544113|emb|CCE40835.1| hypothetical protein CPAR2_108740 [Candida parapsilosis]
Length = 650
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 177/443 (39%), Gaps = 88/443 (19%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V L+ +V E L ++F G ++ + + D T K+ G+A V + E +A
Sbjct: 62 SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNYHKFEDGEKAI 121
Query: 396 QHLDGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
L+ ++ GR ++ P + +GN I
Sbjct: 122 DELNYSLVEGRPCRIMWSQRDPSARRSGDGN----------------------------I 153
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKE 510
+KNL D KAL + F GR+L + V Q+K F + Y +
Sbjct: 154 FIKNL---HPAIDNKALHDTFSAFGRIL------SCKVATDDMGQSKC-FGFVHYETGEA 203
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+E G+ +E GK K + E + EE K N
Sbjct: 204 AEAAIENV-NGMLLNDREVFVGKHVSKKDRESKF--EEMKANY----------------- 243
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
T +Y+KN++ TE F G I S+ + + +D K S G+G
Sbjct: 244 ----------TNIYVKNIDLGFTEKEFEELFAPYGKITSIYLEKDQDGK------SKGFG 287
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGS 686
FV + +S A++ L + ++ +I + R+ + E K+ + ++K G
Sbjct: 288 FVNYEEHKSAVDAVEALNDKEINGQKIYVGRAQKKRERTEELKKQYEAIRLEKLSKYQGV 347
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFGFVEFITKNEAKRAM 745
+ ++N+ Q ++EE FK FG + ++ MV +G +GFGFV F T EA +A+
Sbjct: 348 NLFIKNLDDQIDSEKLEEEFKPFGTITSAKV---MVDDAGKSKGFGFVCFSTPEEATKAI 404
Query: 746 KALCQSTHLYGRRLVLEWAEEAD 768
+ Q + G+ L + A+ D
Sbjct: 405 TEMNQRM-INGKPLYVALAQRKD 426
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
D ++IKNL+ ++ F G I S VA GQ S +GFV + T E+
Sbjct: 150 DGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVATD----DMGQ--SKCFGFVHYETGEA 203
Query: 640 LNQALKVLQNSSLDEHQIELKR--SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
A++ + L++ ++ + + S ++ ES+ +K +N I V+NI
Sbjct: 204 AEAAIENVNGMLLNDREVFVGKHVSKKDRESKFEEMKANYTN--------IYVKNIDLGF 255
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ E EELF +G++ + L K G +GFGFV + A A++AL + G+
Sbjct: 256 TEKEFEELFAPYGKITSIYLEKDQ--DGKSKGFGFVNYEEHKSAVDAVEAL-NDKEINGQ 312
Query: 758 RLVLEWAEEA-DNVEDIRKR 776
++ + A++ + E+++K+
Sbjct: 313 KIYVGRAQKKRERTEELKKQ 332
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 17/225 (7%)
Query: 303 AADDNNNASMENIK----AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFE 358
AA +N N + N + KH ++ +F E A I+V+N+ TE + +LF
Sbjct: 206 AAIENVNGMLLNDREVFVGKHVSKKDRESKFEEMKANYTNIYVKNIDLGFTEKEFEELFA 265
Query: 359 KYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
YG + + L D++ K+KGF V + + A A + L+ G+ +++ + K
Sbjct: 266 PYGKITSIYLEKDQD-GKSKGFGFVNYEEHKSAVDAVEALNDKEINGQKIYVGRAQKKRE 324
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GR 476
K + I KL + V + +KNL + L+ F+PFG + +
Sbjct: 325 RTEELKKQYEAIRLEKLSKYQGVN-------LFIKNLDDQIDSEKLEEEFKPFGTITSAK 377
Query: 477 VLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V+V G + G V F +A A + PLY+ A
Sbjct: 378 VMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMINGKPLYVALA 422
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 86/200 (43%), Gaps = 30/200 (15%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKDEKNC 271
K Y I VKN+ G +K+ + F P + + +L G ++ +++ K+
Sbjct: 240 KANYTNIYVKNIDLGFTEKEFEELFAPY--GKITSIYLEKDQDGKSKGFGFVNYEEHKSA 297
Query: 272 NKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE 331
A+ K++N K Y G A + + K Q ++++ +
Sbjct: 298 VDAVEA----LNDKEINGQKI-------YVGRAQKKRE------RTEELKKQYEAIRLEK 340
Query: 332 DIAESG-RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
G +F++NL + + L + F+ +G + + +D + K+KGF V F PE
Sbjct: 341 LSKYQGVNLFIKNLDDQIDSEKLEEEFKPFGTITSAKVMVD-DAGKSKGFGFVCFSTPEE 399
Query: 391 ATQAYQHLDGTVFLGRMLHL 410
AT+A ++ + G+ L++
Sbjct: 400 ATKAITEMNQRMINGKPLYV 419
>gi|357120111|ref|XP_003561773.1| PREDICTED: polyadenylate-binding protein-like [Brachypodium
distachyon]
Length = 714
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 19/213 (8%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T LY+KNL+ + TE+ I+ F + GP+ SV + ++ D S G+GFV F + +S
Sbjct: 280 TNLYMKNLDDDMTEELIKLKFSQFGPLISVKIMKRDDGTSK------GFGFVSFKSPDSA 333
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLES----EATTVKRKSSNVAKQTGSKILVRNIPFQ 696
+A + + L + + R+ + E + ++++ + K GS + ++NI +
Sbjct: 334 KKAKEAMNGIPLGSKSLYVARAQKKAERKQYLQLLHEEKRNEILTKSNGSNVYIKNISDR 393
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
+ E F FG + V++ + G+ +GFGFV + T +EAK A+ ++ + Y
Sbjct: 394 VDDETLRERFDEFGNITSVKIMRD--DKGISKGFGFVCYNTPDEAKCAVSSM-RGVMFYD 450
Query: 757 RRLVLEWAEEADNVEDIRKRTNRYF---GTAVG 786
+ L + A+ ED + R + F T VG
Sbjct: 451 KPLYVAIAQRK---EDRKARLEQRFAELATMVG 480
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 26/204 (12%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
LY+ +L+ ++ E+ + F K G + SV V R S S+ YG+V ++++
Sbjct: 103 ALYVGDLHEDAQEEHLFDAFSKVGAVTSVRVCRDTATSS-----SLRYGYVNYFSQADAM 157
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE 701
AL+ + +S + + I + SNR+ ++ + V + V+N+
Sbjct: 158 TALEKMNHSLILDKPIRVMWSNRDPDARRSGV------------GNVFVKNLNDHIDNVI 205
Query: 702 VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL-- 759
++ELF FG++ ++ + G RG+GFV+F + A A++ L ++H GR+L
Sbjct: 206 LQELFSKFGDILSCKVARN--DDGTSRGYGFVQFAAQESADIAIENL-NNSHFEGRQLHV 262
Query: 760 --VLEWAEEADNVEDIRKRTNRYF 781
++ +E + N +D K TN Y
Sbjct: 263 AHFIKKSERSANNDD--KYTNLYM 284
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+++KNLN + ++ F K G I S VAR D S GYGFVQF +ES +
Sbjct: 192 VFVKNLNDHIDNVILQELFSKFGDILSCKVARNDDGTS------RGYGFVQFAAQESADI 245
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ L NS + Q+ + + E R ++N K T + ++N+ + +
Sbjct: 246 AIENLNNSHFEGRQLHVAHFIKKSE-------RSANNDDKYT--NLYMKNLDDDMTEELI 296
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ F FG L V++ K+ G +GFGFV F + + AK+A +A+
Sbjct: 297 KLKFSQFGPLISVKIMKR--DDGTSKGFGFVSFKSPDSAKKAKEAM 340
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 125/319 (39%), Gaps = 71/319 (22%)
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQAY 395
G +FV+NL+ + L +LF K+G + + + + D T +G+ V F E A A
Sbjct: 190 GNVFVKNLNDHIDNVILQELFSKFGDI--LSCKVARNDDGTSRGYGFVQFAAQESADIAI 247
Query: 396 QHLDGTVFLGRMLHLIPG-KPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKN 454
++L+ + F GR LH+ K E N D K + +KN
Sbjct: 248 ENLNNSHFEGRQLHVAHFIKKSERSANNDDKYTN---------------------LYMKN 286
Query: 455 LPYRTLPTDLKALFEPFGDLGRVLVPPY--GIT---GLVEFLQKNQAKAAFNSLAYTKFK 509
L +K F FG L V + G + G V F + AK A ++
Sbjct: 287 LDDDMTEELIKLKFSQFGPLISVKIMKRDDGTSKGFGFVSFKSPDSAKKAKEAMNGIPLG 346
Query: 510 EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
LY+ A A++K++ K+ + E + E K N
Sbjct: 347 SKSLYV--------ARAQKKAERKQYLQLLHEEKRNEILTKSN----------------- 381
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
+ +YIKN++ ++++R F + G I SV + R D K +S G+
Sbjct: 382 ----------GSNVYIKNISDRVDDETLRERFDEFGNITSVKIMR--DDKG----ISKGF 425
Query: 630 GFVQFYTRESLNQALKVLQ 648
GFV + T + A+ ++
Sbjct: 426 GFVCYNTPDEAKCAVSSMR 444
>gi|428203801|ref|YP_007082390.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981233|gb|AFY78833.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IF+ NL Y V+EDDL ++F YG + V LP+D+ET + +GFA V T A Q L
Sbjct: 3 IFIGNLPYEVSEDDLKQVFADYGTVKSVRLPMDRETGRVRGFAFVEMDTEAEETAAIQAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + +P+E+
Sbjct: 63 DGAKWIGRSLKVSKARPRED 82
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I + N+P++ + +++++F +G +K VRLP +G RGF FVE T+ E A++A
Sbjct: 3 IFIGNLPYEVSEDDLKQVFADYGTVKSVRLPMDR-ETGRVRGFAFVEMDTEAEETAAIQA 61
Query: 748 LCQSTHLYGRRL 759
L + + GR L
Sbjct: 62 LDGAKWI-GRSL 72
>gi|38566951|emb|CAE76253.1| related to heterogeneous nuclear ribonucleoprotein HRP1 [Neurospora
crassa]
Length = 344
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 21/192 (10%)
Query: 580 DTT----LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
DTT +++N+ F++TE+ ++ F+K G + V +AR DP+ LS GYGFV F
Sbjct: 83 DTTEGHAAFVRNIVFDATEEHLKGAFEKFGNVTDVFLAR--DPRG----LSKGYGFVTFA 136
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
TRE+L +A + S +I ++E V R S+ + + + + NIP+
Sbjct: 137 TREALEEACSQVDGSFWHGRRI-------SVEPRRAKVNRGSA--VGEPSACLFIGNIPY 187
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
+ +E+ +F LK VR+ +G RGF +F+ A A++ L Q T L
Sbjct: 188 ETTDAELNNIFVGIDGLKDVRVAVDRA-TGWPRGFAHADFVDVEAAVNALEKL-QGTQLG 245
Query: 756 GRRLVLEWAEEA 767
R + +++A+ A
Sbjct: 246 ERTIKIDYAQPA 257
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 28/225 (12%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D E FVRN+ + TE+ L FEK+G + +V L D +KG+ VTF E
Sbjct: 83 DTTEGHAAFVRNIVFDATEEHLKGAFEKFGNVTDVFLARDPR-GLSKGYGFVTFATREAL 141
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
+A +DG+ + GR + + P + K N G+ G+ C +
Sbjct: 142 EEACSQVDGSFWHGRRISVEPRRAKVNRGSAVGEPSAC--------------------LF 181
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAFNSLAY 505
+ N+PY T +L +F L V V TG +F+ A A L
Sbjct: 182 IGNIPYETTDAELNNIFVGIDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNALEKLQG 241
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
T+ E + +++A + +E + G+ +E + +G+ + +
Sbjct: 242 TQLGERTIKIDYAQPAAARQPRE-NNGERREYRPRQQRDGQRDGQ 285
>gi|296827786|ref|XP_002851224.1| nucleolar protein 4 [Arthroderma otae CBS 113480]
gi|238838778|gb|EEQ28440.1| nucleolar protein 4 [Arthroderma otae CBS 113480]
Length = 734
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 102/197 (51%), Gaps = 23/197 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++++L +T +S+ +F + P+ TV DP++ S GYGFV F E
Sbjct: 31 TLFVRSLPSTATTESLTEYFSQSYPLKHATVV--LDPQTK---QSKGYGFVTFTDHEDAQ 85
Query: 642 QALKVLQNSSLDEHQIELK----RSNRNLESEATTVKRKSSNVAKQTGS---------KI 688
A K L NS + +I+++ R E E +V + AK+ K+
Sbjct: 86 SAAKELNNSVFEGKKIKIEFAEPRHREIDEKEGKSVPSSVPSKAKELKEKRRLESLPPKL 145
Query: 689 LVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
++RN+P+ + E +E+LF+++G++K +P+K GS + GFGFV + A+RA++
Sbjct: 146 IIRNLPWSVTEPEHLEQLFRSYGKIKHAIVPRK--GSRVA-GFGFVVMRGRKNAERAIEG 202
Query: 748 LCQSTHLYGRRLVLEWA 764
+ + GR L ++WA
Sbjct: 203 V-NGKEVDGRTLAVDWA 218
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 107/231 (46%), Gaps = 28/231 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T T + LT+ F + PL + +D +T ++KG+ VTF E A A + L
Sbjct: 32 LFVRSLPSTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAKEL 91
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI--------- 449
+ +VF G+ + + +P+ H I E++ + V +++K +
Sbjct: 92 NNSVFEGKKIKIEFAEPR----------HREIDEKEGKSVPSSVPSKAKELKEKRRLESL 141
Query: 450 ---ILVKNLPYR-TLPTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFN 501
++++NLP+ T P L+ LF +G + +VP G G V + A+ A
Sbjct: 142 PPKLIIRNLPWSVTEPEHLEQLFRSYGKIKHAIVPRKGSRVAGFGFVVMRGRKNAERAIE 201
Query: 502 SLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKEN 552
+ + L ++WA + ++ + +E NE GE E ++KE+
Sbjct: 202 GVNGKEVDGRTLAVDWAVDKNEWDSMNNA-AEEAASNEVAGESEEADEKEH 251
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 36/213 (16%)
Query: 216 KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV-----RTTFLGMAYIGFKD 267
+AP +R+ T+ V++LP+ + L YF PL A+V G ++ F D
Sbjct: 21 QAPAKERKTRTLFVRSLPSTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTD 80
Query: 268 EKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDS 326
++ A + N S ++GK++ I + I K KS S
Sbjct: 81 HEDAQSAAKELNNSVFEGKKIKI----------------EFAEPRHREIDEKEGKSVPSS 124
Query: 327 V-QFAEDIAESGR-------IFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKT 377
V A+++ E R + +RNL ++VTE + L +LF YG + I+P ++ +
Sbjct: 125 VPSKAKELKEKRRLESLPPKLIIRNLPWSVTEPEHLEQLFRSYGKIKHAIVP--RKGSRV 182
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
GF V ++A +A + ++G GR L +
Sbjct: 183 AGFGFVVMRGRKNAERAIEGVNGKEVDGRTLAV 215
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
IF+RNL ++ T+D L + F K+G L + +D T++ KG A V F E A
Sbjct: 307 IFIRNLPFSATDDTLYEHFSKFGSLRYARVVLDPATERPKGTAFVCFYRVEDAA 360
>gi|367050962|ref|XP_003655860.1| hypothetical protein THITE_2120031 [Thielavia terrestris NRRL 8126]
gi|347003124|gb|AEO69524.1| hypothetical protein THITE_2120031 [Thielavia terrestris NRRL 8126]
Length = 795
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 34/247 (13%)
Query: 548 EKKENTAEEDNQQGVPEVEENVEEDEEREP-------EPDTTLYIKNLNFNSTEDSIRRH 600
+K++ AEE P E E + +P E L++++L ++T +S+
Sbjct: 6 KKRQREAEE-----APANPEAASEQQASDPPSKKARVESRRQLFVRSLPPSATSESLAEF 60
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL- 659
F + P+ TV DPK+ S GYGFV F E +A + L N D +++L
Sbjct: 61 FSQHYPVKHATVVL--DPKTK---TSRGYGFVSFADPEDAVEAKEKLANELFDGRRLKLD 115
Query: 660 ---------KRSNRNLESEATTVKRKSSN--VAKQTGSKILVRNIPFQAKQSE-VEELFK 707
+S S+A K+K + A + K+++RN+P+ K E + +LF+
Sbjct: 116 IAQPRHRDAAKSGPEAVSQAAAEKQKRAEELAAARKPPKLIIRNLPWSIKTPEQLAKLFQ 175
Query: 708 AFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEA 767
++G++KF LP + +G GFGFV + A++AM+A+ + GR + ++WA +
Sbjct: 176 SYGKVKFADLPNQ---NGKLAGFGFVTLRGRKNAEKAMQAI-NGKEIDGRTVAVDWAVDK 231
Query: 768 DNVEDIR 774
E ++
Sbjct: 232 QTWEKLK 238
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + L + F ++ P+ + +D +T ++G+ V+F PE A +A + L
Sbjct: 43 LFVRSLPPSATSESLAEFFSQHYPVKHATVVLDPKTKTSRGYGFVSFADPEDAVEAKEKL 102
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG--KVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
+F GR L L +P+ + G V +E++ A ++ AR ++++NLP
Sbjct: 103 ANELFDGRRLKLDIAQPRHRDAAKSGPEAVSQAAAEKQKRA-EELAAARKPPKLIIRNLP 161
Query: 457 YRT-LPTDLKALFEPFGDLGRVLVP----PYGITGLVEFLQKNQAKAAFNSLAYTKFKEV 511
+ P L LF+ +G + +P G V + A+ A ++ +
Sbjct: 162 WSIKTPEQLAKLFQSYGKVKFADLPNQNGKLAGFGFVTLRGRKNAEKAMQAINGKEIDGR 221
Query: 512 PLYLEWA 518
+ ++WA
Sbjct: 222 TVAVDWA 228
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
+F+RNL YT T++ L F ++G + + +D+ TDK G V F
Sbjct: 373 LFIRNLPYTTTDETLKAHFSRFGRVRYARVVMDRATDKPAGTGFVCFF 420
>gi|85109471|ref|XP_962933.1| hypothetical protein NCU06217 [Neurospora crassa OR74A]
gi|28924577|gb|EAA33697.1| hypothetical protein NCU06217 [Neurospora crassa OR74A]
Length = 772
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 335 ESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
ES R +F+R L + T + LT+ F ++ P+ + +D +T ++G+ VTF PE +
Sbjct: 42 ESNRSLFIRQLPPSATAESLTEFFSQHFPVKHATVVLDPKTKTSRGYGFVTFTDPEDTLE 101
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A L+ + G+ L L + + + G V ++E K V EA+ ++++
Sbjct: 102 AKAKLNNYLLEGKRLKLDIAEARHRDAKKTGPVVSKVAEEKQKRAEAVAEAQKPNKLIIR 161
Query: 454 NLPYRT-LPTDLKALFEPFGDLGRVLVP----PYGITGLVEFLQKNQAKAAFNSLAYTKF 508
NLP+ P L LF+P+G + +P G V + A+ A ++ +
Sbjct: 162 NLPWSIKKPEQLAELFKPYGKVRFADLPNDKGKLSGFGFVTLRGRKNAEKAIEAVNGMEV 221
Query: 509 KEVPLYLEWA 518
PL ++WA
Sbjct: 222 DGRPLAVDWA 231
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 21/199 (10%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
E + +L+I+ L ++T +S+ F + P+ TV DPK+ S GYGFV F
Sbjct: 42 ESNRSLFIRQLPPSATAESLTEFFSQHFPVKHATVVL--DPKTK---TSRGYGFVTFTDP 96
Query: 638 ESLNQALKVLQNSSLDEHQIEL----------KRSNRNLESEATTVKRKSSNVAK-QTGS 686
E +A L N L+ +++L K++ + A ++++ VA+ Q +
Sbjct: 97 EDTLEAKAKLNNYLLEGKRLKLDIAEARHRDAKKTGPVVSKVAEEKQKRAEAVAEAQKPN 156
Query: 687 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
K+++RN+P+ K+ E + ELFK +G+++F LP G GFGFV + A++A+
Sbjct: 157 KLIIRNLPWSIKKPEQLAELFKPYGKVRFADLPN---DKGKLSGFGFVTLRGRKNAEKAI 213
Query: 746 KALCQSTHLYGRRLVLEWA 764
+A+ + GR L ++WA
Sbjct: 214 EAV-NGMEVDGRPLAVDWA 231
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 171/425 (40%), Gaps = 99/425 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L + VT+ L LF + G + V + D + ++ G+ V F P A +A L
Sbjct: 26 LYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMDVL 85
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T + + ++ H S RK A N I +KNL R
Sbjct: 86 NFTPLNNKPIRIM-------------YSHRDPSVRKSGAAN----------IFIKNLD-R 121
Query: 459 TLPTDLKALFEPFGDLGRVL-----VPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKE 510
+ D KAL++ F G +L + G++ G V+F + A++A + L +
Sbjct: 122 AI--DHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLND 179
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
P+Y+ G ++K+ D + + N
Sbjct: 180 KPVYV-----------------------------GHFQRKQ-----DRDNALSNAKFN-- 203
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
+Y+KNL+ + T+D ++ F + G I S V R D K S +G
Sbjct: 204 -----------NVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVDGK------SKCFG 246
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQI----ELKRSNRNLESEATTVKRKSSNVAKQTGS 686
FV F ++ +A++ L D+ + LK+ R LE + + V K G+
Sbjct: 247 FVNFENADAAAEAVEALNGKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGA 306
Query: 687 KILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ ++N+ ++ ELF FG + K +R P+ G+ RG GFV F T EA R
Sbjct: 307 NLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQ-----GISRGSGFVAFSTPEEATR 361
Query: 744 AMKAL 748
A+ +
Sbjct: 362 ALAEM 366
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 23/186 (12%)
Query: 567 ENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPG 622
ENV D P P+ T+LY+ +L+ + T+ + F + G + SV + R +
Sbjct: 6 ENVNNDVAAAPVPNQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQ-- 63
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK 682
S+GYG+V F +A+ VL + L+ I + S+R+ +V K
Sbjct: 64 ---SLGYGYVNFSNPHDAAKAMDVLNFTPLNNKPIRIMYSHRD------------PSVRK 108
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+ I ++N+ + + F FG + ++ M SGL +G+GFV+F + A+
Sbjct: 109 SGAANIFIKNLDRAIDHKALYDTFSIFGNILSCKI--AMDASGLSKGYGFVQFENEESAQ 166
Query: 743 RAMKAL 748
A+ L
Sbjct: 167 SAIDKL 172
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 223 QYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALN---KNK 279
+++ + VKNL V DLK F T + + C +N +
Sbjct: 201 KFNNVYVKNLSESVTDDDLKNTF-----GEYGTITSAVVMRDVDGKSKCFGFVNFENADA 255
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
+ + LN K+ D+ Y G A +E +K +H +S +++V D +
Sbjct: 256 AAEAVEALNGKKF--DDKEWYVGKALKKYERELE-LKERHEQSMKETV----DKFYGANL 308
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
+++NL +VT++ L++LF ++G + + D + ++G V F PE AT+A ++
Sbjct: 309 YLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQ-GISRGSGFVAFSTPEEATRALAEMN 367
Query: 400 GTVFLGRMLHLIPGKPKE 417
G + G+ L++ P + KE
Sbjct: 368 GKMVAGKPLYVAPAQKKE 385
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A+ ++V+NLS +VT+DDL F +YG + ++ D + K+K F V F + A +
Sbjct: 200 AKFNNVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVD-GKSKCFGFVNFENADAAAE 258
Query: 394 AYQHLDGTVFLGRMLHLIPGKP-KENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
A + L+G F + ++ GK K+ E ++ + ER + + V+ + +
Sbjct: 259 AVEALNGKKFDDKEWYV--GKALKKYERELE------LKERHEQSMKETVDKFYGANLYL 310
Query: 453 KNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTK 507
KNL L LF FG + ++L P GI +G V F +A A +
Sbjct: 311 KNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEATRALAEMNGKM 370
Query: 508 FKEVPLYLEWAPEGVFAEAKEKSKGK 533
PLY+ AP A+ KE+ K +
Sbjct: 371 VAGKPLYV--AP----AQKKEERKAR 390
>gi|428309319|ref|YP_007120296.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428250931|gb|AFZ16890.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 101
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VTE+D+ ++F +YG + V LP D+ET + +GFA V E T A + L
Sbjct: 3 IYVGNLSYDVTEEDIREVFAEYGTVNNVTLPKDRETGRKRGFAFVEMGTDEEETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KP+E+
Sbjct: 63 DGAEWMGRNLKVNKAKPRED 82
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ + + ++ E+F +G + V LPK +G RGF FVE T E A++A
Sbjct: 3 IYVGNLSYDVTEEDIREVFAEYGTVNNVTLPKDRE-TGRKRGFAFVEMGTDEEETAAIEA 61
Query: 748 LCQSTHLYGRRL 759
L GR L
Sbjct: 62 L-DGAEWMGRNL 72
>gi|411117881|ref|ZP_11390262.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711605|gb|EKQ69111.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 100
Score = 74.7 bits (182), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 50/86 (58%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VTEDDLT +F +YG + V LP D+ET + +GF V A L
Sbjct: 3 IYVGNLSYEVTEDDLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVEMSADAEEDAAIDAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR L + KP+EN GN G
Sbjct: 63 DGAEWMGRDLKVNKAKPRENRGNSFG 88
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 191/479 (39%), Gaps = 117/479 (24%)
Query: 187 ADISD-----MEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDL 241
+DI+D +E L ++ + P+ ++ +++P + ++ V L V + L
Sbjct: 2 SDITDKTAEQLEKLNIQDEQPAATPATTAIE--AESPNVENVTASLYVGELDPSVSEALL 59
Query: 242 KAYFKPL-PLASVRT-------TFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKY 292
F P+ ++S+R T LG AY+ F D + A+ K N + KG+ I
Sbjct: 60 YDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIEKLNYTAIKGRPCRIMWS 119
Query: 293 SKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+D S + G SG IF++NL +
Sbjct: 120 QRDPSMRKKG---------------------------------SGNIFIKNLHPDIDNKT 146
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L + F +G + + D ET K+KGF V F E A +A ++G + G+ +++ P
Sbjct: 147 LYETFSVFGNILSCKIAND-ETGKSKGFGFVHFENEEAAREAIDAINGMLLNGQEVYVAP 205
Query: 413 GKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-ILVKNLPYRTLPTDLKALFEPF 471
K++ + KLD EAR+ + VKNL D + LF+P+
Sbjct: 206 HVSKKDR------------QSKLD------EARANFTNVYVKNLDLEATEEDFENLFKPY 247
Query: 472 GDLGRVLV------PPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE 525
G + V + G G V+F A A +L T++K LY+ A
Sbjct: 248 GTITSVALEKDAEGKSRGF-GFVDFENHEDAVKAVEALNDTEYKGQTLYVGRAQ------ 300
Query: 526 AKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYI 585
K+ E+ +E ++ + K E A+ QG+ L+I
Sbjct: 301 -------KKYERLQELKKQYQASKLEKLAK---YQGI-------------------NLFI 331
Query: 586 KNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
KNL+ + ++ ++ F G I S V R ++ K S G+GFV F T E +A+
Sbjct: 332 KNLDDSIDDEKLKEEFAPFGTITSARVMRTENGK------SKGFGFVCFSTPEEATRAI 384
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 168/450 (37%), Gaps = 102/450 (22%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+ ++V L +V+E L +F G ++ + + D T + G+A V F E A
Sbjct: 42 TASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAI 101
Query: 396 QHLDGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
+ L+ T GR ++ P K+ GN I
Sbjct: 102 EKLNYTAIKGRPCRIMWSQRDPSMRKKGSGN----------------------------I 133
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNS 502
+KNL D K L+E F G +L G V F + A+ A ++
Sbjct: 134 FIKNL---HPDIDNKTLYETFSVFGNILSCKIANDETGKSKGFGFVHFENEEAAREAIDA 190
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
+ +Y+ AP + +++D Q +
Sbjct: 191 INGMLLNGQEVYV--AP--------------------------------HVSKKDRQSKL 216
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPG 622
E N T +Y+KNL+ +TE+ FK G I SV + + + K
Sbjct: 217 DEARANF-----------TNVYVKNLDLEATEEDFENLFKPYGTITSVALEKDAEGK--- 262
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSS 678
S G+GFV F E +A++ L ++ + + R+ + E K+ K
Sbjct: 263 ---SRGFGFVDFENHEDAVKAVEALNDTEYKGQTLYVGRAQKKYERLQELKKQYQASKLE 319
Query: 679 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
+AK G + ++N+ +++E F FG + R+ + +G +GFGFV F T
Sbjct: 320 KLAKYQGINLFIKNLDDSIDDEKLKEEFAPFGTITSARVMR--TENGKSKGFGFVCFSTP 377
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
EA RA+ Q + G+ L + A+ D
Sbjct: 378 EEATRAITEKNQQI-VAGKPLYVAIAQRKD 406
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 13/207 (6%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
A H ++ + E A ++V+NL TE+D LF+ YG + V L D E K
Sbjct: 204 APHVSKKDRQSKLDEARANFTNVYVKNLDLEATEEDFENLFKPYGTITSVALEKDAE-GK 262
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
++GF V F E A +A + L+ T + G+ L++ + K K + KL
Sbjct: 263 SRGFGFVDFENHEDAVKAVEALNDTEYKGQTLYVGRAQKKYERLQELKKQYQASKLEKLA 322
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFL 491
+ + + +KNL LK F PFG + RV+ G + G V F
Sbjct: 323 KYQGIN-------LFIKNLDDSIDDEKLKEEFAPFGTITSARVMRTENGKSKGFGFVCFS 375
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+A A PLY+ A
Sbjct: 376 TPEEATRAITEKNQQIVAGKPLYVAIA 402
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 30/206 (14%)
Query: 215 SKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGF 265
SK + + + VKNL ++D + FKP ++ + L G ++ F
Sbjct: 214 SKLDEARANFTNVYVKNLDLEATEEDFENLFKPY--GTITSVALEKDAEGKSRGFGFVDF 271
Query: 266 KDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE 324
++ ++ KA+ N + +KG+ L + + K KY ++ +K ++ S+
Sbjct: 272 ENHEDAVKAVEALNDTEYKGQTLYVGRAQK----KYE---------RLQELKKQYQASKL 318
Query: 325 DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVT 384
+ + + I +F++NL ++ ++ L + F +G + + + E K+KGF V
Sbjct: 319 EKLAKYQGI----NLFIKNLDDSIDDEKLKEEFAPFGTITSARV-MRTENGKSKGFGFVC 373
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHL 410
F PE AT+A + + G+ L++
Sbjct: 374 FSTPEEATRAITEKNQQIVAGKPLYV 399
>gi|68468953|ref|XP_721535.1| hypothetical protein CaO19.3037 [Candida albicans SC5314]
gi|68469502|ref|XP_721264.1| hypothetical protein CaO19.10555 [Candida albicans SC5314]
gi|74680286|sp|Q5AI15.1|PABP_CANAL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46443173|gb|EAL02457.1| hypothetical protein CaO19.10555 [Candida albicans SC5314]
gi|46443455|gb|EAL02737.1| hypothetical protein CaO19.3037 [Candida albicans SC5314]
gi|238879187|gb|EEQ42825.1| polyadenylate-binding protein [Candida albicans WO-1]
Length = 629
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 98/193 (50%), Gaps = 15/193 (7%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T +Y+KN++ N +E+S + F G I S+ + + +D K S G+GFV F ES
Sbjct: 233 TNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGK------SKGFGFVNFEDHESA 286
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQ 696
+A++ L + ++ +I + R+ + E K+ + +AK G + V+N+
Sbjct: 287 VKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDT 346
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
++EE FK FG + ++ MV +G +GFGFV F T EA +A+ + + +
Sbjct: 347 IDSEKLEEEFKPFGTITSAKV---MVDEAGKSKGFGFVCFTTPEEATKAITEM-NTRMIN 402
Query: 756 GRRLVLEWAEEAD 768
G+ L + A+ D
Sbjct: 403 GKPLYVALAQRKD 415
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 13/207 (6%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
KH ++ +F E A I+V+N+ +E+ KLF +G + + L D++ K
Sbjct: 213 GKHISKKDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQD-GK 271
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KGF V F E A +A + L+ G+ +++ + K K + + KL
Sbjct: 272 SKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLA 331
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFL 491
+ V + VKNL L+ F+PFG + +V+V G + G V F
Sbjct: 332 KYQGVN-------LFVKNLDDTIDSEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFT 384
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+A A + PLY+ A
Sbjct: 385 TPEEATKAITEMNTRMINGKPLYVALA 411
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 30/200 (15%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKDEKNC 271
K + I VKN+ ++ + F P + + +L G ++ F+D ++
Sbjct: 229 KANFTNIYVKNIDLNYSEESFEKLFSPF--GKITSIYLEKDQDGKSKGFGFVNFEDHESA 286
Query: 272 NKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE 331
KA+ + K++N K Y G A + + K Q ++V+ +
Sbjct: 287 VKAVEE----LNDKEINGQKI-------YVGRAQKKRE------RLEELKKQYEAVRLEK 329
Query: 332 DIAESG-RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
G +FV+NL T+ + L + F+ +G + + +D E K+KGF V F PE
Sbjct: 330 LAKYQGVNLFVKNLDDTIDSEKLEEEFKPFGTITSAKVMVD-EAGKSKGFGFVCFTTPEE 388
Query: 391 ATQAYQHLDGTVFLGRMLHL 410
AT+A ++ + G+ L++
Sbjct: 389 ATKAITEMNTRMINGKPLYV 408
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
D ++IKNL+ ++ F G I S VA + GQ S +GFV + T E+
Sbjct: 139 DGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDEF----GQ--SKCFGFVHYETAEA 192
Query: 640 LNQALKVLQNSSLDEHQIELKR--SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
A++ + L++ ++ + + S ++ ES+ +K +N I V+NI
Sbjct: 193 AEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKANFTN--------IYVKNIDLNY 244
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ E+LF FG++ + L K G +GFGFV F A +A++ L + G+
Sbjct: 245 SEESFEKLFSPFGKITSIYLEKDQ--DGKSKGFGFVNFEDHESAVKAVEEL-NDKEINGQ 301
Query: 758 RLVLEWAEEA-DNVEDIRKR 776
++ + A++ + +E+++K+
Sbjct: 302 KIYVGRAQKKRERLEELKKQ 321
>gi|322695427|gb|EFY87235.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 725
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+L++++L N T +++ F + P+ V + K S GYGFV +
Sbjct: 43 SLFVRSLPANVTNEALADFFSQHFPVKHAVVVVDQKTKE-----SRGYGFVTLADSDDAL 97
Query: 642 QALKVLQNSSLDEHQIELKRS---NRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
A L + + +I + + RN + TV +K Q K++VRN+P+ K
Sbjct: 98 AAKNTLDKAEWEGKRIRIDIAEPRKRNAANSEKTVHKKPGREESQKPPKLIVRNLPWSIK 157
Query: 699 QSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
SE + LFK++G++KF LP+ G RGFGFV K A++A++ + + GR
Sbjct: 158 TSEQLSHLFKSYGKVKFADLPQ---SKGKLRGFGFVTIRGKKNAEKALEGV-NGKEIDGR 213
Query: 758 RLVLEWA 764
L ++WA
Sbjct: 214 TLAVDWA 220
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 17/193 (8%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ E +FVR+L VT + L F ++ P+ ++ +D++T +++G+ VT + A
Sbjct: 38 VEERRSLFVRSLPANVTNEALADFFSQHFPVKHAVVVVDQKTKESRGYGFVTLADSDDAL 97
Query: 393 QAYQHLDGTVFLGRMLHLIPGKP-KENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
A LD + G+ + + +P K N N + VH E++ ++
Sbjct: 98 AAKNTLDKAEWEGKRIRIDIAEPRKRNAANSEKTVHKKPGRE---------ESQKPPKLI 148
Query: 452 VKNLPYRTLPTD-LKALFEPFGDLGRVLVPP-----YGITGLVEFLQKNQAKAAFNSLAY 505
V+NLP+ ++ L LF+ +G + +P G G V K A+ A +
Sbjct: 149 VRNLPWSIKTSEQLSHLFKSYGKVKFADLPQSKGKLRGF-GFVTIRGKKNAEKALEGVNG 207
Query: 506 TKFKEVPLYLEWA 518
+ L ++WA
Sbjct: 208 KEIDGRTLAVDWA 220
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
S +F+RNL +T T++ L F +G + + IDK T+K G V F+
Sbjct: 325 SSTVFIRNLPFTTTDEQLKGFFSHFGAVRYARVVIDKVTEKPAGTGFVCFV 375
>gi|336469459|gb|EGO57621.1| hypothetical protein NEUTE1DRAFT_122010 [Neurospora tetrasperma
FGSC 2508]
gi|350290896|gb|EGZ72110.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 771
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 335 ESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
ES R +F+R L + T + LT+ F ++ P+ + +D +T ++G+ VTF PE +
Sbjct: 42 ESNRSLFIRQLPPSATAESLTEFFSQHFPVKHATVVLDPKTKTSRGYGFVTFTDPEDTLE 101
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
A L+ + G+ L L + + + G V ++E K V EA+ ++++
Sbjct: 102 AKAKLNNYLLEGKRLKLDIAEARHRDAKKTGPVVSKVAEEKQKRAEAVAEAQKPNKLIIR 161
Query: 454 NLPYRT-LPTDLKALFEPFGDLGRVLVP----PYGITGLVEFLQKNQAKAAFNSLAYTKF 508
NLP+ P L LF+P+G + +P G V + A+ A ++ +
Sbjct: 162 NLPWSIKKPEQLAELFKPYGKVRFADLPNDKGKLSGFGFVTLRGRKNAEKAIEAVNGLEV 221
Query: 509 KEVPLYLEWA 518
PL ++WA
Sbjct: 222 DGRPLAVDWA 231
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 21/199 (10%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
E + +L+I+ L ++T +S+ F + P+ TV DPK+ S GYGFV F
Sbjct: 42 ESNRSLFIRQLPPSATAESLTEFFSQHFPVKHATVVL--DPKTK---TSRGYGFVTFTDP 96
Query: 638 ESLNQALKVLQNSSLDEHQIEL----------KRSNRNLESEATTVKRKSSNVAK-QTGS 686
E +A L N L+ +++L K++ + A ++++ VA+ Q +
Sbjct: 97 EDTLEAKAKLNNYLLEGKRLKLDIAEARHRDAKKTGPVVSKVAEEKQKRAEAVAEAQKPN 156
Query: 687 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
K+++RN+P+ K+ E + ELFK +G+++F LP G GFGFV + A++A+
Sbjct: 157 KLIIRNLPWSIKKPEQLAELFKPYGKVRFADLPN---DKGKLSGFGFVTLRGRKNAEKAI 213
Query: 746 KALCQSTHLYGRRLVLEWA 764
+A+ + GR L ++WA
Sbjct: 214 EAV-NGLEVDGRPLAVDWA 231
>gi|225428865|ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147839912|emb|CAN65906.1| hypothetical protein VITISV_004873 [Vitis vinifera]
Length = 648
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 176/463 (38%), Gaps = 113/463 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L V + L LF + G + V + D T ++ G+ V + P+ A +A L
Sbjct: 32 LYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVL 91
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ T G+ + ++ P K GN I +K
Sbjct: 92 NFTPLNGKPIRIMYSHRDPSIRKSGTGN----------------------------IFIK 123
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVL-----VPPYGIT---GLVEFLQKNQAKAAFNSLAY 505
NL D KAL + F G +L G++ G V+F + A+ A + L
Sbjct: 124 NLDKGI---DHKALHDTFSAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNG 180
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEV 565
+ +++ G F +E+ KEK
Sbjct: 181 MLLNDKQVFV-----GPFVRKQERESTINKEKF--------------------------- 208
Query: 566 EENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFL 625
+++KN++ TE+ + R F + GPI SV V R D KS
Sbjct: 209 ---------------NNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSK---- 249
Query: 626 SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVA 681
+GFV F + +++ L D+ + + K+S R +E ++ + V
Sbjct: 250 --CFGFVNFENVDDAAMSVEALNGQKFDDKEWYVGKAQKKSEREIELKSRFEQNMKEAVD 307
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITK 738
K G+ + ++N+ +++ELF FG + K +R P +GL RG GFV F +
Sbjct: 308 KFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDP-----NGLSRGSGFVAFSSP 362
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
EA RA+ A S + + L + A+ ED R R F
Sbjct: 363 EEASRAL-AEMNSKMVVSKPLYVALAQRK---EDRRARLQAQF 401
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L N + + F + G + SV V R + S+GYG+V + +
Sbjct: 30 TSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRR-----SLGYGYVNYSNPQDA 84
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL VL + L+ I + S+R+ ++ K I ++N+
Sbjct: 85 ARALDVLNFTPLNGKPIRIMYSHRD------------PSIRKSGTGNIFIKNLDKGIDHK 132
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ SG+ +G GFV+F ++ A++A+ L
Sbjct: 133 ALHDTFSAFGNILSCKVATD--ASGMSKGHGFVQFDSEEAAQKAIDKL 178
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGMA---YIGFKDEKNCNKA 274
++K +++ + VKN+ G+ ++DL F P+ SV G GF + +N + A
Sbjct: 203 INKEKFNNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVDDA 262
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
++ LN K+ D+ Y G A + +E +K++ ++ +++V D
Sbjct: 263 AMSVEA------LNGQKF--DDKEWYVGKAQKKSEREIE-LKSRFEQNMKEAV----DKF 309
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
+ ++++NL ++ +D L +LF ++G + + D ++G V F PE A++A
Sbjct: 310 QGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDP-NGLSRGSGFVAFSSPEEASRA 368
Query: 395 YQHLDGTVFLGRMLHLIPGKPKEN 418
++ + + + L++ + KE+
Sbjct: 369 LAEMNSKMVVSKPLYVALAQRKED 392
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 178/466 (38%), Gaps = 119/466 (25%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L TVT+ L + F + G + V + D T ++ G+ V + P+ A++A L
Sbjct: 41 LYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 100
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ GR + ++ P K GN I +K
Sbjct: 101 NFMALNGRAIRVMYSVRDPSLRKSGVGN----------------------------IFIK 132
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVL-----VPPYGIT---GLVEFLQKNQAKAAFNSLAY 505
NL D KAL E F G +L V P G + G V++ A+ A + L
Sbjct: 133 NLDKSI---DHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQRAIDKLNG 189
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEV 565
+ +Y+ G F ++ EK K
Sbjct: 190 MLLNDKQVYV-----GPFVHKLQRDPSGEKVKF--------------------------- 217
Query: 566 EENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFL 625
T +Y+KNL+ + +++ + + F + G S + R + KS
Sbjct: 218 ---------------TNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKS----- 257
Query: 626 SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT- 684
G+GFV F + +A+ L + D+ + + ++ + E E T +K+K K+
Sbjct: 258 -KGFGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERE-TELKQKFEQSLKEAA 315
Query: 685 ----GSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFIT 737
GS + V+N+ ++ E F FG + K +R P +G+ RG GFV F T
Sbjct: 316 DKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDP-----TGVSRGSGFVAFST 370
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLE--WAEEADNVEDIRKRTNRYF 781
EA RA+ T + G+ +V + + A ED + R F
Sbjct: 371 PEEASRAI------TEMNGKMIVTKPLYVALAQRKEDRKARLQAQF 410
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 149/399 (37%), Gaps = 112/399 (28%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG Y+ + ++ ++ALN+ N G+ + + +D S + SG
Sbjct: 80 LGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGV------------- 126
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
G IF++NL ++ L + F +GP+ + +D + +
Sbjct: 127 --------------------GNIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDP-SGQ 165
Query: 377 TKGFALVTFLMPEHATQAYQHLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCI 430
+KG+ V + E A +A L+G V++G +H + P
Sbjct: 166 SKGYGFVQYDTDEAAQRAIDKLNGMLLNDKQVYVGPFVHKLQRDP--------------- 210
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----- 485
S K+ N + VKNL +L +F FG ++ G
Sbjct: 211 SGEKVKFTN----------VYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGF 260
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG 545
G V F + A A ++L F + KE GK ++K+E E E
Sbjct: 261 GFVNFENSDDAARAVDALNGKTFDD----------------KEWFVGKAQKKSERETELK 304
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
++ ++ D QG + LY+KNL+ + T+D +R HF G
Sbjct: 305 QKFEQSLKEAADKSQG-------------------SNLYVKNLDESVTDDKLREHFAPFG 345
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
I S V R DP +S G GFV F T E ++A+
Sbjct: 346 TITSCKVMR--DPTG----VSRGSGFVAFSTPEEASRAI 378
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+ T+ + F + G + SV V R + S+GYG+V + T +
Sbjct: 39 TSLYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRR-----SLGYGYVNYATPQDA 93
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
++AL L +L+ I + S R+ ++ K I ++N+
Sbjct: 94 SRALNELNFMALNGRAIRVMYSVRD------------PSLRKSGVGNIFIKNLDKSIDHK 141
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ E F AFG + ++ + SG +G+GFV++ T A+RA+ L
Sbjct: 142 ALHETFSAFGPILSCKV--AVDPSGQSKGYGFVQYDTDEAAQRAIDKL 187
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
E S++ A D ++ ++V+NL +VT+D L + F +G + + D T ++G V
Sbjct: 308 EQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDP-TGVSRGSGFV 366
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
F PE A++A ++G + + + L++ + KE+
Sbjct: 367 AFSTPEEASRAITEMNGKMIVTKPLYVALAQRKED 401
>gi|336465131|gb|EGO53371.1| hypothetical protein NEUTE1DRAFT_52411 [Neurospora tetrasperma FGSC
2508]
Length = 597
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 580 DTT----LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
DTT +++N+ F++TE+ ++ F+K G + V +AR DP+ LS GYGFV F
Sbjct: 345 DTTEGHAAFVRNIVFDATEEHLKGAFEKFGNVTDVFLAR--DPRG----LSKGYGFVTFA 398
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
TRE+L +A + S +I ++E V R S+ + + + + NIP+
Sbjct: 399 TREALEEACSQVDGSFWHGRRI-------SVEPRRAKVNRGSA--VGEPSACLFIGNIPY 449
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
+ +E+ +F LK VR+ +G RGF +F+ A A++ L Q T L
Sbjct: 450 ETTDAELNNIFVGIDGLKDVRVAVDRA-TGWPRGFAHADFVDVEAAVNALEKL-QGTQLG 507
Query: 756 GRRLVLEWAE 765
R + +++A+
Sbjct: 508 ERTIKIDYAQ 517
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D E FVRN+ + TE+ L FEK+G + +V L D +KG+ VTF E
Sbjct: 345 DTTEGHAAFVRNIVFDATEEHLKGAFEKFGNVTDVFLARDPR-GLSKGYGFVTFATREAL 403
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
+A +DG+ + GR + + P + K N G+ G+ C +
Sbjct: 404 EEACSQVDGSFWHGRRISVEPRRAKVNRGSAVGEPSAC--------------------LF 443
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAFNSLAY 505
+ N+PY T +L +F L V V TG +F+ A A L
Sbjct: 444 IGNIPYETTDAELNNIFVGIDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNALEKLQG 503
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKE 536
T+ E + +++A + V A ++ G+ +E
Sbjct: 504 TQLGERTIKIDYA-QPVAARQPRENNGERRE 533
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 10/188 (5%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+++ L++N D + F CG I S TV ++ S G+G+V F T E+ +
Sbjct: 329 VFVGQLSWNVDNDWLASEFASCGEIESATVQMDRN-----TGKSRGFGYVHFTTVEAAQK 383
Query: 643 ALKVLQNSSLDEHQIELKRSN-RNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE 701
AL+ L +D I++ S RN ++ + +V + + V N+ F +
Sbjct: 384 ALE-LNGKEIDNRPIKVDISTPRNPDAARQKRAQTFGDVTSPPSNTLFVGNLSFNTSEDS 442
Query: 702 VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
V LF +G +K VRLP SG +GFG+VEF AK+A +A L GR + L
Sbjct: 443 VWSLFNDYG-VKSVRLPTDRE-SGRPKGFGYVEFEDVEGAKKAFEA-NNGADLDGRPIRL 499
Query: 762 EWAEEADN 769
++++ DN
Sbjct: 500 DYSQPRDN 507
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +FV NLS+ +ED + LF YG + V LP D+E+ + KGF V F E A +A+
Sbjct: 426 SNTLFVGNLSFNTSEDSVWSLFNDYG-VKSVRLPTDRESGRPKGFGYVEFEDVEGAKKAF 484
Query: 396 QHLDGTVFLGRMLHLIPGKPKEN 418
+ +G GR + L +P++N
Sbjct: 485 EANNGADLDGRPIRLDYSQPRDN 507
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 20/194 (10%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D +S +FV LS+ V D L F G + + +D+ T K++GF V F E A
Sbjct: 322 DAQQSKAVFVGQLSWNVDNDWLASEFASCGEIESATVQMDRNTGKSRGFGYVHFTTVEAA 381
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
+A + L+G R + + P+ N D +++ F V S +
Sbjct: 382 QKALE-LNGKEIDNRPIKVDISTPR----NPD-----AARQKRAQTFGDVTSPPS-NTLF 430
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLA 504
V NL + T + +LF +G + V +P P G G VEF AK AF +
Sbjct: 431 VGNLSFNTSEDSVWSLFNDYG-VKSVRLPTDRESGRPKGF-GYVEFEDVEGAKKAFEANN 488
Query: 505 YTKFKEVPLYLEWA 518
P+ L+++
Sbjct: 489 GADLDGRPIRLDYS 502
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P TL++ NL+FN++EDS+ F G + SV + ++ P G+G+V+F E
Sbjct: 425 PSNTLFVGNLSFNTSEDSVWSLFNDYG-VKSVRLPTDRESGRP-----KGFGYVEFEDVE 478
Query: 639 SLNQALKVLQNSSLDEHQIEL 659
+A + + LD I L
Sbjct: 479 GAKKAFEANNGADLDGRPIRL 499
>gi|168018573|ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686875|gb|EDQ73261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 165/418 (39%), Gaps = 79/418 (18%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V +L V+E L ++F + G + + + D T ++ G++ V + + AT+A
Sbjct: 23 STSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQDATRAL 82
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ L+ F G + GKP + S R + + I +KNL
Sbjct: 83 ELLN---FTG-----VNGKP----------IRIMFSHR-----DPSIRKSGTANIFIKNL 119
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYL 515
D KAL + F AAF ++ K
Sbjct: 120 ---DKSIDNKALHDTF--------------------------AAFGNILSCK-------- 142
Query: 516 EWAPEGVFAEAKEKSKGKE-KEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEE 574
V +A +SKG + +EE + EK D Q V E D+
Sbjct: 143 ------VATDASGQSKGYGFVQFEQEESAQNAIEKVNGMLLNDKQVFVGPFVRRQERDQA 196
Query: 575 REPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQF 634
+Y+KNL +T+D +++ F GPI+S V R D KS +GFV F
Sbjct: 197 GGVSKFNNVYVKNLADVTTDDELKKVFGAWGPISSAVVMRDNDGKSK------CFGFVNF 250
Query: 635 YTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGSKILV 690
+ +A++ LQ DE + + K+S R E A + + + K G + +
Sbjct: 251 EHPDDAAKAVEALQGKKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYL 310
Query: 691 RNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+N+ ++ ELF +G + ++ + G +G GFV F + +EA RA+ +
Sbjct: 311 KNLDDTVDDEKIRELFAEYGTITSCKVMRDH--QGQSKGSGFVAFSSPDEATRAVTEM 366
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 146/396 (36%), Gaps = 106/396 (26%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG +Y+ + + ++ +AL N + GK + I +D S + SG A+
Sbjct: 65 LGYSYVNYNNAQDATRALELLNFTGVNGKPIRIMFSHRDPSIRKSGTAN----------- 113
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
IF++NL ++ L F +G + + D + +
Sbjct: 114 ----------------------IFIKNLDKSIDNKALHDTFAAFGNILSCKVATDA-SGQ 150
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KG+ V F E A A + ++G + + + + P ++ G +
Sbjct: 151 SKGYGFVQFEQEESAQNAIEKVNGMLLNDKQVFVGPFVRRQERDQAGG----------VS 200
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGITGLVEFL 491
FN V VKNL T +LK +F +G + +V G V F
Sbjct: 201 KFNNV---------YVKNLADVTTDDELKKVFGAWGPISSAVVMRDNDGKSKCFGFVNFE 251
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGE---EGEEE 548
+ A A +L KF E Y+ G+ ++K+E E E + E+E
Sbjct: 252 HPDDAAKAVEALQGKKFDEKEWYV----------------GRAQKKSEREAELRAKFEQE 295
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
+KE + QGV LY+KNL+ ++ IR F + G I
Sbjct: 296 RKERI---EKYQGV-------------------NLYLKNLDDTVDDEKIRELFAEYGTIT 333
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
S V R +S G GFV F + + +A+
Sbjct: 334 SCKVMRDHQGQSKGS------GFVAFSSPDEATRAV 363
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 27/201 (13%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
A +++ ++V+NL+ T+D+L K+F +GP++ ++ D + K+K F V F P+
Sbjct: 196 AGGVSKFNNVYVKNLADVTTDDELKKVFGAWGPISSAVVMRDND-GKSKCFGFVNFEHPD 254
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
A +A + L G F + ++ + K SER+ + + + R +RI
Sbjct: 255 DAAKAVEALQGKKFDEKEWYVGRAQKK--------------SEREAELRAKFEQERKERI 300
Query: 450 -------ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAK 497
+ +KNL ++ LF +G + +V+ G +G V F ++A
Sbjct: 301 EKYQGVNLYLKNLDDTVDDEKIRELFAEYGTITSCKVMRDHQGQSKGSGFVAFSSPDEAT 360
Query: 498 AAFNSLAYTKFKEVPLYLEWA 518
A + PLY+ A
Sbjct: 361 RAVTEMNGKMVGNKPLYVALA 381
>gi|241948533|ref|XP_002416989.1| ARS consensus binding protein, putative; poly(A)-binding protein,
putative; polyadenylate tail-binding protein, putative;
polyadenylate-binding protein, cytoplasmic and nuclear,
putative [Candida dubliniensis CD36]
gi|223640327|emb|CAX44577.1| ARS consensus binding protein, putative [Candida dubliniensis CD36]
Length = 627
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 15/193 (7%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T +Y+KN++ N +E+S + F G I S+ + + +D K S G+GFV F +S
Sbjct: 232 TNIYVKNIDLNYSEESFEKLFAPYGKITSIYLEKDQDGK------SKGFGFVNFENHDSA 285
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQ 696
+A++ L + ++ +I + R+ + E K+ + +AK G + V+N+
Sbjct: 286 VKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAARLEKLAKYQGVNLFVKNLDDA 345
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
++EE FK+FG + ++ MV +G +GFGFV F T EA +A+ + + +
Sbjct: 346 IDSEKLEEEFKSFGTITSAKV---MVDDAGKSKGFGFVCFTTPEEATKAITEM-NTRMIN 401
Query: 756 GRRLVLEWAEEAD 768
G+ L + A+ D
Sbjct: 402 GKPLYVALAQRKD 414
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 13/207 (6%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
KH ++ +F E A I+V+N+ +E+ KLF YG + + L D++ K
Sbjct: 212 GKHISKKDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFAPYGKITSIYLEKDQD-GK 270
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KGF V F + A +A + L+ G+ +++ + K K + KL
Sbjct: 271 SKGFGFVNFENHDSAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAARLEKLA 330
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFL 491
+ V + VKNL L+ F+ FG + +V+V G + G V F
Sbjct: 331 KYQGVN-------LFVKNLDDAIDSEKLEEEFKSFGTITSAKVMVDDAGKSKGFGFVCFT 383
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+A A + PLY+ A
Sbjct: 384 TPEEATKAITEMNTRMINGKPLYVALA 410
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 20/200 (10%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
D ++IKNL+ ++ F G I S VA + GQ S +GFV + T E+
Sbjct: 138 DGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVAADEF----GQ--SKCFGFVHYETAEA 191
Query: 640 LNQALKVLQNSSLDEHQIELKR--SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
A++ + L++ ++ + + S ++ ES+ +K +N I V+NI
Sbjct: 192 AEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKANFTN--------IYVKNIDLNY 243
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ E+LF +G++ + L K G +GFGFV F + A +A++ L + G+
Sbjct: 244 SEESFEKLFAPYGKITSIYLEKDQ--DGKSKGFGFVNFENHDSAVKAVEEL-NDKEINGQ 300
Query: 758 RLVLEWAEEA-DNVEDIRKR 776
++ + A++ + +E+++K+
Sbjct: 301 KIYVGRAQKKRERLEELKKQ 320
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPI--ASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
+ +++ L++N ++ ++ F+ CG + ASV + R+ S G+G+V F T
Sbjct: 390 NCNIFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTG-------RSKGFGYVSFSTP 442
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-VRNIPFQ 696
E+ +A+ + +D + + + + A K+ V+ + SK+L V N+ F
Sbjct: 443 EAAEKAIAEMNGKEIDGRAVNVNAATPKTPNPAGRAKQFGDTVSAE--SKVLFVGNVSFN 500
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
A + + E F G++ VRLP +G +GFG+VEF + AK A AL + G
Sbjct: 501 ANEDMLWETFGEHGDIVSVRLPTDRE-TGQMKGFGYVEFTSVENAKSAFNAL-NGKDIAG 558
Query: 757 RRLVLEWAEEADN 769
R + L++++ DN
Sbjct: 559 RNIRLDFSQPRDN 571
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IFV LS+ V ++ L FE G + + +D++T ++KGF V+F PE A +A +
Sbjct: 393 IFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEKAIAEM 452
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G GR +++ PK N G+ F V A SK ++ V N+ +
Sbjct: 453 NGKEIDGRAVNVNAATPKTP--NPAGRAK---------QFGDTVSAESK-VLFVGNVSFN 500
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITG------LVEFLQKNQAKAAFNSL 503
L F GD+ V +P TG VEF AK+AFN+L
Sbjct: 501 ANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAFNAL 551
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 328 QFAEDI-AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
QF + + AES +FV N+S+ ED L + F ++G + V LP D+ET + KGF V F
Sbjct: 480 QFGDTVSAESKVLFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFT 539
Query: 387 MPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
E+A A+ L+G GR + L +P++N
Sbjct: 540 SVENAKSAFNALNGKDIAGRNIRLDFSQPRDN 571
>gi|427416011|ref|ZP_18906194.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425758724|gb|EKU99576.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLS+ TEDD+ +F +YG +A + LP+D+ET K +GFA + + E A L
Sbjct: 3 IYVGNLSFQATEDDIRDVFVEYGEVARITLPVDRETGKRRGFAFINMVKDEEEDLAIAEL 62
Query: 399 DGTVFLGRMLHLIPGKPKENE 419
DG +LGR L + KPK ++
Sbjct: 63 DGAEWLGRELRVNKAKPKGDD 83
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 173/452 (38%), Gaps = 91/452 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VT+ L +F + G + V + D T ++ G+ V + P+ A +A L
Sbjct: 31 LYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDVL 90
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + ++ H S RK A N I +KNL
Sbjct: 91 NFTPLNGKPIRVM-------------YSHRDPSIRKSGAGN----------IFIKNL--- 124
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
D KAL + F G +L K A +S
Sbjct: 125 DKAIDHKALHDTFSAFGSIL----------------SCKVALDS---------------- 152
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
+ K G + NEE + E K D Q V E D +
Sbjct: 153 ------SGQSKGYGFVQFDNEESALKAIE-KLNGMLLNDKQVYVGPFLRKQERDGVVDKS 205
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
+++KNL+ +TE+ + + F + G + S+ V R D K S +GFV F +
Sbjct: 206 KFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGK------SRCFGFVNFENAD 259
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA----KQTGSKILVRNIP 694
+A+ L +D+ + + ++ + E E R + K G+ + ++N+
Sbjct: 260 DAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIKNLD 319
Query: 695 FQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
+++ELF FG + K +R P +G+ RG GFV F T +EA RA+
Sbjct: 320 DSIGDDKLKELFAPFGTITSCKVMRDP-----NGISRGSGFVAFSTPDEASRAL------ 368
Query: 752 THLYGRRLVLE--WAEEADNVEDIRKRTNRYF 781
+ G+ +V + + A ED R R F
Sbjct: 369 VEMNGKMVVSKPLYVALAQRKEDRRARLQAQF 400
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 179/487 (36%), Gaps = 120/487 (24%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG Y+ + + ++ +AL+ N + GK + + +D S + SGA
Sbjct: 70 LGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGA------------- 116
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
G IF++NL + L F +G + + +D + +
Sbjct: 117 --------------------GNIFIKNLDKAIDHKALHDTFSAFGSILSCKVALD-SSGQ 155
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPG-KPKENEGNVDGKVHCCISERKL 435
+KG+ V F E A +A + L+G + + +++ P + +E +G VD
Sbjct: 156 SKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGPFLRKQERDGVVDKS---------- 205
Query: 436 DAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYG-----ITGLVEF 490
FN V VKNL T DL F FG L ++V G V F
Sbjct: 206 -KFNNV---------FVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNF 255
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKK 550
+ A A ++L G + KE GK ++K+E E E ++
Sbjct: 256 ENADDAARAVDTL----------------NGKLVDDKEWYVGKAQKKSEREVELKHRFEQ 299
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
D QG LYIKNL+ + +D ++ F G I S
Sbjct: 300 TMKEAADKYQG-------------------ANLYIKNLDDSIGDDKLKELFAPFGTITSC 340
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V R DP +S G GFV F T + ++AL + + + + + R + A
Sbjct: 341 KVMR--DPNG----ISRGSGFVAFSTPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRA 394
Query: 671 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFG-----ELKFVRLPKKMVGSG 725
+ S +R++P A + ++ G +L + + P M+ S
Sbjct: 395 RLQAQFSQ-----------IRSVPMPASVAPRMPIYPPGGPGIGQQLFYGQAPPAMIPS- 442
Query: 726 LHRGFGF 732
GFG+
Sbjct: 443 -QGGFGY 448
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+ N T+ + F + G + SV V R + S+GYG+V + +
Sbjct: 29 TSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRR-----SLGYGYVNYSNPQDA 83
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL VL + L+ I + S+R+ ++ K I ++N+
Sbjct: 84 ARALDVLNFTPLNGKPIRVMYSHRD------------PSIRKSGAGNIFIKNLDKAIDHK 131
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ + SG +G+GFV+F + A +A++ L
Sbjct: 132 ALHDTFSAFGSILSCKV--ALDSSGQSKGYGFVQFDNEESALKAIEKL 177
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYV 83
T+E L F E GT+T + + +GK R F F+ + D A A+D N V
Sbjct: 220 TEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFENADDAARAVDTLNGKLV 273
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 13/188 (6%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++ NL++N E+ +R+ F+ G ++ V + +D S G+G+V++ +
Sbjct: 304 LFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRD-----SGRSRGFGYVEYVNAADAAK 358
Query: 643 ALKVLQNSSLDEHQIELK------RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
A +++ +D +I L +N N + A R + + V NIPF
Sbjct: 359 AYNAKKDTEIDGRKINLDYATGRPANNNNNQDRAQARARNFGDQTSPESDTLFVGNIPFS 418
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
A + V ELF G + +RLP SG +GFG+V+F + +EA++A L L G
Sbjct: 419 ANEDSVSELFGQSGTIVGIRLPTDPE-SGRPKGFGYVQFSSVDEARQAFNDL-NGAELNG 476
Query: 757 RRLVLEWA 764
R + L+++
Sbjct: 477 RPVRLDFS 484
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 304 ADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL 363
A++NNN +A+++ Q ES +FV N+ ++ ED +++LF + G +
Sbjct: 383 ANNNNNQDRAQARARNFGDQTSP--------ESDTLFVGNIPFSANEDSVSELFGQSGTI 434
Query: 364 AEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNV 422
+ LP D E+ + KGF V F + A QA+ L+G GR + L P+ + G+
Sbjct: 435 VGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDLNGAELNGRPVRLDFSTPRPSNGDA 493
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 17/192 (8%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +FV NLS+ V E+ L + FE +G L+ V + D+++ +++GF V ++ A +AY
Sbjct: 301 SANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADAAKAY 360
Query: 396 QHLDGTVFLGRMLHL--IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
T GR ++L G+P N N D ++ + F S + V
Sbjct: 361 NAKKDTEIDGRKINLDYATGRPANNNNNQD------RAQARARNFGDQTSPESD-TLFVG 413
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAYT 506
N+P+ + LF G + + +P P G G V+F ++A+ AFN L
Sbjct: 414 NIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGF-GYVQFSSVDEARQAFNDLNGA 472
Query: 507 KFKEVPLYLEWA 518
+ P+ L+++
Sbjct: 473 ELNGRPVRLDFS 484
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 13/188 (6%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++ NL++N E+ +R+ F+ G ++ V + +D S G+G+V++ +
Sbjct: 304 LFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRD-----SGRSRGFGYVEYVNAADAAK 358
Query: 643 ALKVLQNSSLDEHQIELK------RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
A +++ +D +I L +N N + A R + + V NIPF
Sbjct: 359 AYNAKKDTEIDGRKINLDYATGRPANNNNNQDRAQARARNFGDQTSPESDTLFVGNIPFS 418
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
A + V ELF G + +RLP SG +GFG+V+F + +EA++A L L G
Sbjct: 419 ANEDSVSELFGQSGTIVGIRLPTDPE-SGRPKGFGYVQFSSVDEARQAFNDL-NGAELNG 476
Query: 757 RRLVLEWA 764
R + L+++
Sbjct: 477 RPVRLDFS 484
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 304 ADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL 363
A++NNN +A+++ Q ES +FV N+ ++ ED +++LF + G +
Sbjct: 383 ANNNNNQDRAQARARNFGDQTSP--------ESDTLFVGNIPFSANEDSVSELFGQSGTI 434
Query: 364 AEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNV 422
+ LP D E+ + KGF V F + A QA+ L+G GR + L P+ + G+
Sbjct: 435 VGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDLNGAELNGRPVRLDFSTPRPSNGDA 493
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 17/192 (8%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +FV NLS+ V E+ L + FE +G L+ V + D+++ +++GF V ++ A +AY
Sbjct: 301 SANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADAAKAY 360
Query: 396 QHLDGTVFLGRMLHL--IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
T GR ++L G+P N N D ++ + F S + V
Sbjct: 361 NAKKDTEIDGRKINLDYATGRPANNNNNQD------RAQARARNFGDQTSPESD-TLFVG 413
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAYT 506
N+P+ + LF G + + +P P G G V+F ++A+ AFN L
Sbjct: 414 NIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGF-GYVQFSSVDEARQAFNDLNGA 472
Query: 507 KFKEVPLYLEWA 518
+ P+ L+++
Sbjct: 473 ELNGRPVRLDFS 484
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 172/428 (40%), Gaps = 99/428 (23%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V +L TV+E L ++F + G + + + D T ++ G+A V + + AT+A
Sbjct: 23 STSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDATRAL 82
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ L+ + + GKP + S R + + I +KNL
Sbjct: 83 ELLN--------FNAVNGKP----------IRIMFSHR-----DPSIRKSGTANIFIKNL 119
Query: 456 PYRTLPTDLKALFEPFGDLGRVL-----VPPYGIT---GLVEFLQKNQAKAAFNSLAYTK 507
D KAL + F G +L P G + G V+F Q+ A+ A +
Sbjct: 120 DKSI---DNKALHDTFAAFGTILSCKVATDPSGQSKGYGFVQFEQEESAQTAIEKVNGML 176
Query: 508 FKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEE 567
+ +++ G F +E+ +Q GV
Sbjct: 177 LNDKQVFV-----GPFVRRQER----------------------------DQSGVVSKFN 203
Query: 568 NVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSM 627
NV Y+KNL ++T+D +++ F+ GPI+S V R + K S
Sbjct: 204 NV--------------YVKNLADSTTDDELKKVFEAYGPISSAVVMRDNEGK------SK 243
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQ 683
+GFV F + +A++ L DE + + K+S R E A + + + K
Sbjct: 244 CFGFVNFEHADDAAKAVEALNGKKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKY 303
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNE 740
G + ++N+ ++ E+F +G + K +R P+ G RG GFV F + +E
Sbjct: 304 QGVNLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQ-----GQSRGSGFVAFSSPDE 358
Query: 741 AKRAMKAL 748
A RA+ +
Sbjct: 359 ATRAVTEM 366
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 152/396 (38%), Gaps = 106/396 (26%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG AY+ + + ++ +AL N + GK + I +D S + SG A+
Sbjct: 65 LGYAYVNYNNAQDATRALELLNFNAVNGKPIRIMFSHRDPSIRKSGTAN----------- 113
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
IF++NL ++ L F +G + + D + +
Sbjct: 114 ----------------------IFIKNLDKSIDNKALHDTFAAFGTILSCKVATDP-SGQ 150
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KG+ V F E A A + ++G + + + + P + E + G V
Sbjct: 151 SKGYGFVQFEQEESAQTAIEKVNGMLLNDKQVFVGPFV-RRQERDQSGVV---------S 200
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGITGLVEFL 491
FN V VKNL T +LK +FE +G + +V G V F
Sbjct: 201 KFNNV---------YVKNLADSTTDDELKKVFEAYGPISSAVVMRDNEGKSKCFGFVNFE 251
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGE---EGEEE 548
+ A A +L KF E KE G+ ++K+E E E + E+E
Sbjct: 252 HADDAAKAVEALNGKKFDE----------------KEWYVGRAQKKSEREAELRAKFEQE 295
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
+KE + QGV LY+KNL+ ++ +R F + G I
Sbjct: 296 RKERI---EKYQGV-------------------NLYLKNLDDTIDDEKLREIFSEYGTIV 333
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
S V R DP+ GQ S G GFV F + + +A+
Sbjct: 334 SCKVMR--DPQ--GQ--SRGSGFVAFSSPDEATRAV 363
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 55/272 (20%)
Query: 259 GMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G ++ F+ E++ A+ K N KQ+ + + + SG NN
Sbjct: 153 GYGFVQFEQEESAQTAIEKVNGMLLNDKQVFVGPFVRRQERDQSGVVSKFNN-------- 204
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
++V+NL+ + T+D+L K+FE YGP++ ++ D E K+
Sbjct: 205 ---------------------VYVKNLADSTTDDELKKVFEAYGPISSAVVMRDNE-GKS 242
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVF------LGRMLHLIPGKPKENEGNVDGKVHCCIS 431
K F V F + A +A + L+G F +GR K E E + K
Sbjct: 243 KCFGFVNFEHADDAAKAVEALNGKKFDEKEWYVGRAQ-----KKSEREAELRAKFE---Q 294
Query: 432 ERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TG 486
ERK + +E + +KNL L+ +F +G + +V+ P G +G
Sbjct: 295 ERK-----ERIEKYQGVNLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQGQSRGSG 349
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F ++A A + PLY+ A
Sbjct: 350 FVAFSSPDEATRAVTEMNGKMVGSKPLYVALA 381
>gi|428214973|ref|YP_007088117.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428003354|gb|AFY84197.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 106
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT++DL +F +YG + V LP D+ET + +GFA V T A + L
Sbjct: 3 IYVGNLSYEVTQEDLNAVFAEYGSVKRVNLPTDRETGRVRGFAFVEMATETEETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG ++GR + + KP+E+ G+
Sbjct: 63 DGAEWMGRDMKVNKAKPREDRGS 85
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ ++ Q ++ +F +G +K V LP +G RGF FVE T+ E A++A
Sbjct: 3 IYVGNLSYEVTQEDLNAVFAEYGSVKRVNLPTDRE-TGRVRGFAFVEMATETEETAAIEA 61
Query: 748 L 748
L
Sbjct: 62 L 62
>gi|428308134|ref|YP_007144959.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428249669|gb|AFZ15449.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 113
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VTEDDL +F +YG + V LP D+ET + +GFA V + A + L
Sbjct: 3 IYVGNLSYEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFVEMQTEDQENAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KP+E+
Sbjct: 63 DGAEWMGRDLKVNKAKPRED 82
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTE-GKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y++T++ L + F E GTV V L E G+ R FAF+ EDQ AA++ +
Sbjct: 10 YEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFVEMQTEDQENAAIEALDGAEWMG 69
Query: 86 SRIKVEKC 93
+KV K
Sbjct: 70 RDLKVNKA 77
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 167/422 (39%), Gaps = 99/422 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +VT+ L LF + G + V + D + ++ G+ V + P+ A +A + L
Sbjct: 27 LYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARALEML 86
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G + ++ H + RK A N I +KNL
Sbjct: 87 NFTPLNGSPIRVM-------------YSHRDPTIRKSGAGN----------IFIKNL--- 120
Query: 459 TLPTDLKALFEPFGDLGRVL-----VPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL + F G +L P G + G V+F + A+ A L +
Sbjct: 121 DKAIDHKALHDTFSAFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLND 180
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G F +E+ +K +
Sbjct: 181 KQVYV-----GPFLRKQERDTATDKMRF-------------------------------- 203
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
+++KNL+ +TE+ + + F + G I S+ V R D K S +G
Sbjct: 204 ----------NNVFVKNLSETTTEEDLNKTFGEFGTITSIVVMRDGDGK------SKCFG 247
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA----KQTGS 686
FV F E +A++ L +D+ + + ++ + E E +R ++ K G+
Sbjct: 248 FVNFENAEDAAKAVEALNGKKIDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQGA 307
Query: 687 KILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ ++N+ +++ELF FG + K +R P +G+ RG GFV F T EA R
Sbjct: 308 NLYIKNLDDSIGDEKLKELFSPFGTITSCKVMRDP-----NGISRGSGFVAFSTPEEASR 362
Query: 744 AM 745
A+
Sbjct: 363 AL 364
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L + T+ + F + G + SV V R + S+GYG+V + +
Sbjct: 25 TSLYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRR-----SLGYGYVNYSNPQDA 79
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL++L + L+ I + S+R+ + K I ++N+
Sbjct: 80 ARALEMLNFTPLNGSPIRVMYSHRD------------PTIRKSGAGNIFIKNLDKAIDHK 127
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ SG +G+GFV+F ++ A++A++ L
Sbjct: 128 ALHDTFSAFGNILSCKVATD--PSGQSKGYGFVQFDSEEAAQKAIEKL 173
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 16/166 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ ++ F G I S VA DP GQ S GYGFVQF + E+ +
Sbjct: 115 IFIKNLDKAIDHKALHDTFSAFGNILSCKVA--TDPS--GQ--SKGYGFVQFDSEEAAQK 168
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ L L++ Q+ + R E + T K + +NV V+N+ + ++
Sbjct: 169 AIEKLNGMLLNDKQVYVGPFLRKQERDTATDKMRFNNV--------FVKNLSETTTEEDL 220
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ F FG + + + + G G + FGFV F +A +A++AL
Sbjct: 221 NKTFGEFGTITSIVVMRD--GDGKSKCFGFVNFENAEDAAKAVEAL 264
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 118/314 (37%), Gaps = 66/314 (21%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+G IF++NL + L F +G + + D + ++KG+ V F E A +A
Sbjct: 112 AGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDP-SGQSKGYGFVQFDSEEAAQKAI 170
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ L+G + + +++ P K+ K+ FN V VKNL
Sbjct: 171 EKLNGMLLNDKQVYVGPFLRKQERDTATDKMR----------FNNV---------FVKNL 211
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYG-----ITGLVEFLQKNQAKAAFNSLAYTKFKE 510
T DL F FG + ++V G G V F A A +L K +
Sbjct: 212 SETTTEEDLNKTFGEFGTITSIVVMRDGDGKSKCFGFVNFENAEDAAKAVEALNGKKIDD 271
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
KE GK ++K E E E + ++ D QG
Sbjct: 272 ----------------KEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQG--------- 306
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
LYIKNL+ + ++ ++ F G I S V R DP +S G G
Sbjct: 307 ----------ANLYIKNLDDSIGDEKLKELFSPFGTITSCKVMR--DPNG----ISRGSG 350
Query: 631 FVQFYTRESLNQAL 644
FV F T E ++AL
Sbjct: 351 FVAFSTPEEASRAL 364
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV+NLS T TE+DL K F ++G + +++ D + K+K F V F E A +A + L
Sbjct: 206 VFVKNLSETTTEEDLNKTFGEFGTITSIVVMRDGD-GKSKCFGFVNFENAEDAAKAVEAL 264
Query: 399 DGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+G F+G+ K+ E V+ + +R + + + + +
Sbjct: 265 NGKKIDDKEWFVGK-------AQKKYEREVE------LKQRFEQSMKEAADKFQGANLYI 311
Query: 453 KNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTK 507
KNL LK LF PFG + +V+ P GI +G V F +A A +
Sbjct: 312 KNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKI 371
Query: 508 FKEVPLYLEWA 518
PLY+ A
Sbjct: 372 VVSKPLYVALA 382
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
E S++ A D + ++++NL ++ ++ L +LF +G + + D ++G V
Sbjct: 294 EQSMKEAADKFQGANLYIKNLDDSIGDEKLKELFSPFGTITSCKVMRDP-NGISRGSGFV 352
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
F PE A++A ++G + + + L++ + KE+
Sbjct: 353 AFSTPEEASRALLEMNGKIVVSKPLYVALAQRKED 387
>gi|194768871|ref|XP_001966534.1| GF22224 [Drosophila ananassae]
gi|190617298|gb|EDV32822.1| GF22224 [Drosophila ananassae]
Length = 490
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 153 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 212
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 213 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 258
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 259 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 318
Query: 750 QST 752
+T
Sbjct: 319 GTT 321
>gi|15228191|ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog [Arabidopsis thaliana]
gi|9279720|dbj|BAB01277.1| poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6 [Arabidopsis thaliana]
Length = 537
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 180/452 (39%), Gaps = 86/452 (19%)
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G ++V +LS VTE DL F P+ V L + T K+ +A + F P A+ A
Sbjct: 21 GSLYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASNAMT 80
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
L+ + G+ + ++ S+R L + + + VKNL
Sbjct: 81 RLNHSDLKGKAMRIM------------------WSQRDLAYRRRTRTGFAN--LYVKNLD 120
Query: 457 YRTLPTDLKALFEPFGD-LGRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVP 512
+ L+ +F PFG L +V G + G V+F + A +A ++L
Sbjct: 121 SSITSSCLERMFCPFGSILSCKVVEENGQSKGFGFVQFDTEQSAVSARSAL--------- 171
Query: 513 LYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEED 572
G K+ K K+E G ++
Sbjct: 172 -------HGSMVYGKKLFVAKFINKDERAAMAGNQD------------------------ 200
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
T +Y+KNL T+D + F + G ++SV V R G S G+GFV
Sbjct: 201 -------STNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRD------GMGRSRGFGFV 247
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN-VAK--QTGSKIL 689
F E+ +A++ L L ++ + ++ + E ++ S N +AK S +
Sbjct: 248 NFCNPENAKKAMESLCGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPNMRWSNLY 307
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V+N+ ++ + E+F +G++ V +G +GFGFV F E+K+A + L
Sbjct: 308 VKNLSESMNETRLREIFGCYGQI--VSAKVMCHENGRSKGFGFVCFSNCEESKQAKRYL- 364
Query: 750 QSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+ G+ +V+ AE ED KR +YF
Sbjct: 365 NGFLVDGKPIVVRVAERK---EDRIKRLQQYF 393
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 168/459 (36%), Gaps = 107/459 (23%)
Query: 220 HKRQYHTIVVKNLPAGVKKKDLKAYFK-PLPLASV---RTTFLG----MAYIGFKDEKNC 271
H ++ ++ V +L V +KDL F +P+ SV R + G AYI F +
Sbjct: 16 HSSRFGSLYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSA 75
Query: 272 NKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA 330
+ A+ + N S KGK + I W SQ D
Sbjct: 76 SNAMTRLNHSDLKGKAMRIM-----------------------------W-SQRDLAYRR 105
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
++V+NL ++T L ++F +G + + +E ++KGF V F +
Sbjct: 106 RTRTGFANLYVKNLDSSITSSCLERMFCPFGSILSC--KVVEENGQSKGFGFVQFDTEQS 163
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
A A L G++ G+ L + K+ ER A NQ +
Sbjct: 164 AVSARSALHGSMVYGKKLFVAKFINKD--------------ERAAMAGNQ-----DSTNV 204
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAY 505
VKNL L LF +G + V+V G+ G V F AK A SL
Sbjct: 205 YVKNLIETVTDDCLHTLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCNPENAKKAMESLCG 264
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEV 565
+ L++ GK +K+E E +++ +N + N +
Sbjct: 265 LQLGSKKLFV----------------GKALKKDERR-EMLKQKFSDNFIAKPNMRW---- 303
Query: 566 EENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFL 625
+ LY+KNL+ + E +R F G I S V ++ +S
Sbjct: 304 ---------------SNLYVKNLSESMNETRLREIFGCYGQIVSAKVMCHENGRSK---- 344
Query: 626 SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNR 664
G+GFV F E QA + L +D I ++ + R
Sbjct: 345 --GFGFVCFSNCEESKQAKRYLNGFLVDGKPIVVRVAER 381
>gi|303272375|ref|XP_003055549.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463523|gb|EEH60801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 606
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 165/414 (39%), Gaps = 84/414 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++ +L + TE L +LF GP+ + + D T ++ G+A V F A +A L
Sbjct: 34 LYCGDLDPSCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGNDAARAIDAL 93
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ ++ GKP + S+R + + I +KNL
Sbjct: 94 N--------FQVVNGKP----------IRIMYSQR-----DPALRKSGVGNIFIKNLDKE 130
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
D KAL++ F G + ++ V + Q+K + +F
Sbjct: 131 I---DNKALYDTFAQFGNI------VSAKVATDLQGQSKG----YGFVQF---------- 167
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
+ EEG + EK D Q V ++ ER
Sbjct: 168 -------------------DTEEGAQSAIEKVNGMLLNDKQVYVGPFQKR----NERGGG 204
Query: 579 PDT--TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
P T +Y+KNL+ + TE+ +R F+K G + SV V + + KS G+GFV +
Sbjct: 205 PTTFNNVYVKNLHESVTEEKLREVFEKFGALTSVVVMKDAEGKSK------GFGFVCYED 258
Query: 637 RESLNQALKVLQNSSLDEHQIEL-----KRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
E+ ++++ L E + + K+S R E +A + + K G+ + ++
Sbjct: 259 AEAAGKSVEELDGYDKIEDKAWVVCRAQKKSEREAELKAKFDAERRERMEKMAGANLYIK 318
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
N+ +++ ELF FG + R+ + G+ RG FV F + +EA RA+
Sbjct: 319 NLEDTVDDAKLRELFAEFGTITSCRVMRDTAGA--SRGSAFVAFSSADEATRAV 370
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NL +VTE+ L ++FEK+G L V++ D E K+KGF V + E A ++ + L
Sbjct: 211 VYVKNLHESVTEEKLREVFEKFGALTSVVVMKDAE-GKSKGFGFVCYEDAEAAGKSVEEL 269
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA-FNQVVEARSKRIILVKNLPY 457
DG + ++ K++E + K K DA + +E + + +KNL
Sbjct: 270 DGYDKIEDKAWVVCRAQKKSEREAELKA-------KFDAERRERMEKMAGANLYIKNLED 322
Query: 458 RTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTKFKEVP 512
L+ LF FG + RV+ G + V F ++A A + + P
Sbjct: 323 TVDDAKLRELFAEFGTITSCRVMRDTAGASRGSAFVAFSSADEATRAVTEMNGKMAGQKP 382
Query: 513 LYLEWA 518
LY+ A
Sbjct: 383 LYVALA 388
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 19/166 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY +L+ + TE + F GP+ S+ V R + S+GY +V F
Sbjct: 32 TSLYCGDLDPSCTEAQLYELFSTIGPVVSIRVCRDLITRR-----SLGYAYVNFQQGNDA 86
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A+ L ++ I + S R+ RKS I ++N+ +
Sbjct: 87 ARAIDALNFQVVNGKPIRIMYSQRD------PALRKSGV------GNIFIKNLDKEIDNK 134
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+ + F FG + ++ + G +G+GFV+F T+ A+ A++
Sbjct: 135 ALYDTFAQFGNIVSAKVATDL--QGQSKGYGFVQFDTEEGAQSAIE 178
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 93/446 (20%), Positives = 156/446 (34%), Gaps = 114/446 (25%)
Query: 249 PLASVRTT-------FLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKY 300
P+ S+R LG AY+ F+ + +A++ N GK + I +D + +
Sbjct: 57 PVVSIRVCRDLITRRSLGYAYVNFQQGNDAARAIDALNFQVVNGKPIRIMYSQRDPALRK 116
Query: 301 SGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
SG G IF++NL + L F ++
Sbjct: 117 SGV---------------------------------GNIFIKNLDKEIDNKALYDTFAQF 143
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
G + + D + ++KG+ V F E A A + ++G + + +++ P + + G
Sbjct: 144 GNIVSAKVATDLQ-GQSKGYGFVQFDTEEGAQSAIEKVNGMLLNDKQVYVGPFQKRNERG 202
Query: 421 NVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV- 479
FN V VKNL L+ +FE FG L V+V
Sbjct: 203 G------------GPTTFNNV---------YVKNLHESVTEEKLREVFEKFGALTSVVVM 241
Query: 480 -PPYGITGLVEFLQKNQAKAAFNSL----AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE 534
G + F+ A+AA S+ Y K ++ W V A++KS
Sbjct: 242 KDAEGKSKGFGFVCYEDAEAAGKSVEELDGYDKIEDK----AW----VVCRAQKKS---- 289
Query: 535 KEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTE 594
E + E A+ D E E E LYIKNL +
Sbjct: 290 ------------EREAELKAKFD-----------AERRERMEKMAGANLYIKNLEDTVDD 326
Query: 595 DSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDE 654
+R F + G I S V R S G FV F + + +A+ + +
Sbjct: 327 AKLRELFAEFGTITSCRVMRDTAGASRGS------AFVAFSSADEATRAVTEMNGKMAGQ 380
Query: 655 HQIEL----KRSNRNLESEATTVKRK 676
+ + ++ +R L +A +R+
Sbjct: 381 KPLYVALAQRKEDRRLRLQAQFAQRQ 406
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT+DDL+++F +YG + V LP D+ET + +GF V +A + L
Sbjct: 3 IYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG ++GR + + KP+E+ G+
Sbjct: 63 DGAEWMGRDIKVNKAKPREDRGS 85
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ + Q ++ E+F +G +K V+LP +G RGFGFVE ++NE ++A++A
Sbjct: 3 IYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRE-TGRPRGFGFVEMSSENEEQKAIEA 61
Query: 748 L 748
L
Sbjct: 62 L 62
>gi|322711864|gb|EFZ03437.1| RNA recognition motif containing protein [Metarhizium anisopliae
ARSEF 23]
Length = 731
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+L++++L N T D++ F + P+ V + K S GYGFV +
Sbjct: 44 SLFVRSLPANVTNDTLADFFSQHFPVKHAVVVVDQKTKE-----SRGYGFVTLADSDDAL 98
Query: 642 QALKVLQNSSLDEHQIELKRS---NRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
A L + + +I + + RN + TV ++ Q K++VRN+P+ K
Sbjct: 99 AAKTTLDKAEWEGKRIRIDIAEPRKRNAANSEDTVPKRPGREESQRPPKLIVRNLPWSIK 158
Query: 699 QSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
SE + LF+++G++KF LP+ G RGFGFV K A++A++ + + GR
Sbjct: 159 TSEQLSNLFRSYGKVKFSDLPQ---SKGKLRGFGFVTIRGKKNAEKALEGV-NGKEIDGR 214
Query: 758 RLVLEWA 764
L ++WA
Sbjct: 215 TLAVDWA 221
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 15/192 (7%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ E +FVR+L VT D L F ++ P+ ++ +D++T +++G+ VT + A
Sbjct: 39 VEERRSLFVRSLPANVTNDTLADFFSQHFPVKHAVVVVDQKTKESRGYGFVTLADSDDAL 98
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
A LD + G+ + + +P+ K + SE + E++ ++V
Sbjct: 99 AAKTTLDKAEWEGKRIRIDIAEPR--------KRNAANSEDTVPKRPGREESQRPPKLIV 150
Query: 453 KNLPYRTLPTD-LKALFEPFG-----DLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYT 506
+NLP+ ++ L LF +G DL + G G V K A+ A +
Sbjct: 151 RNLPWSIKTSEQLSNLFRSYGKVKFSDLPQSKGKLRGF-GFVTIRGKKNAEKALEGVNGK 209
Query: 507 KFKEVPLYLEWA 518
+ L ++WA
Sbjct: 210 EIDGRTLAVDWA 221
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
S +F+RNL +T T++ L F +G + + IDK T+K G V F+
Sbjct: 331 SSTVFIRNLPFTTTDEQLKGFFSHFGAVRYARVVIDKITEKPAGTGFVCFV 381
>gi|427718424|ref|YP_007066418.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427350860|gb|AFY33584.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VTE+DL + F +YG + V LP D+ET + +GFA V T A + L
Sbjct: 3 IYVGNLSYQVTEEDLKRAFAEYGTVNRVQLPTDRETGRPRGFAFVEMETDAQETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNV 422
DG ++GR L + KP+E G+
Sbjct: 63 DGAEWMGRDLKVNKAKPREERGSA 86
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTE-GKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y++T+E LK F E GTV VQL E G+ R FAF+ + Q AA++ +
Sbjct: 10 YQVTEEDLKRAFAEYGTVNRVQLPTDRETGRPRGFAFVEMETDAQETAAIEALDGAEWMG 69
Query: 86 SRIKVEKC 93
+KV K
Sbjct: 70 RDLKVNKA 77
>gi|340715217|ref|XP_003396115.1| PREDICTED: RNA-binding protein 28-like [Bombus terrestris]
Length = 769
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 49/227 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSL 503
I+V+N+P++T P D+K L+EPFG++ + P P G ++F Q A A S
Sbjct: 45 IIVRNIPFKTTPEDVKKLYEPFGEILEINFPKRTDGSPVGCC-FIQFKQLKDASKAIFST 103
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
+F + WA S+ K EK ++E E+ E E+ ED ++
Sbjct: 104 NKKEFLGRIISSSWAV----------SRSKYCEKLKKESEKAENLDNEHGTSEDTERSQD 153
Query: 564 EVEEN----VEEDEEREPEPDTTLY----------------------IKNLNFNSTEDSI 597
+ EN +EDEE +P TL I+NL+F +TE+ +
Sbjct: 154 KKHENKQMKQDEDEEEDPSKQETLLQIKRERKRLLKDKNRKKRARIVIRNLSFQATEEDL 213
Query: 598 RRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
++HF G + + + ++ D K ++G F+QF +S +A+
Sbjct: 214 KKHFSPYGSVEEIRILKRSDGK------NIGCAFLQFEHVQSAAKAI 254
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
+ D++E IF++N+ +++ D+L K E+YGP+ ++ ID T+ ++G A V F E
Sbjct: 374 SHDVSEGKTIFLKNVPFSIKNDELKKYMERYGPICYALVCIDPLTEFSRGTAFVKFKNVE 433
Query: 390 HATQA 394
A +
Sbjct: 434 DAEKC 438
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+I+VRNIPF+ +V++L++ FGE+ + PK+ GS + G F++F +A +A+
Sbjct: 44 RIIVRNIPFKTTPEDVKKLYEPFGEILEINFPKRTDGSPV--GCCFIQFKQLKDASKAIF 101
Query: 747 ALCQSTHLYGRRLVLEWA 764
+ + L GR + WA
Sbjct: 102 STNKKEFL-GRIISSSWA 118
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 116/282 (41%), Gaps = 59/282 (20%)
Query: 445 RSKRI-ILVKNLPYRTLPTDLKALFEPFGDLG--RVLVPPYGITGLVEFLQKNQAKAAFN 501
R KR I+++NL ++ DLK F P+G + R+L G FLQ ++A
Sbjct: 193 RKKRARIVIRNLSFQATEEDLKKHFSPYGSVEEIRILKRSDGKNIGCAFLQFEHVQSAAK 252
Query: 502 SLAYTKFKEV---PLYLEWAPEG---VFAEAKEKSKGKEKEKNEEEGE------------ 543
++ YT + + P+ ++WA V ++ K + K + K EEE +
Sbjct: 253 AIHYTNLQPLLNRPIIVDWAVSKNKFVQNNSENKQEDKVRVKVEEESDIEDTDNTKQLNL 312
Query: 544 ----EGEEEKKENTAEE---------------------------DNQQGVPEVEENVEED 572
EGE+E + E D +QG +V+E
Sbjct: 313 NGELEGEDENFDIVTENVEFDNDCLDEVETDNENEVSGNNEENEDEEQGKIDVKETKPRF 372
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
+ + T+++KN+ F+ D ++++ ++ GPI V P S G FV
Sbjct: 373 KSHDVSEGKTIFLKNVPFSIKNDELKKYMERYGPICYALVC-----IDPLTEFSRGTAFV 427
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIELKRS-NRN-LESEATT 672
+F E + L +++ +E R+ +RN +E++A +
Sbjct: 428 KFKNVEDAEKCLSAGNELQMEDQILEAHRALDRNEIENKANS 469
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAYQ 396
RI VRN+ + T +D+ KL+E +G + E+ P K TD + G + F + A++A
Sbjct: 44 RIIVRNIPFKTTPEDVKKLYEPFGEILEINFP--KRTDGSPVGCCFIQFKQLKDASKAIF 101
Query: 397 HLDGTVFLGRML 408
+ FLGR++
Sbjct: 102 STNKKEFLGRII 113
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 43/222 (19%)
Query: 227 IVVKNLPAGVKKKDLKAYFKP----LPLASVRTTF---LGMAYIGFKDEKNCNKAL-NKN 278
I+V+N+P +D+K ++P L + + T +G +I FK K+ +KA+ + N
Sbjct: 45 IIVRNIPFKTTPEDVKKLYEPFGEILEINFPKRTDGSPVGCCFIQFKQLKDASKAIFSTN 104
Query: 279 KSFWKGK------QLNIYKYSK------------DNSAKYSGAADDNNNASMENIKAKHW 320
K + G+ ++ KY + DN S + + + EN + K
Sbjct: 105 KKEFLGRIISSSWAVSRSKYCEKLKKESEKAENLDNEHGTSEDTERSQDKKHENKQMKQD 164
Query: 321 KSQEDSVQFAEDIAE----------------SGRIFVRNLSYTVTEDDLTKLFEKYGPLA 364
+ +E+ E + + RI +RNLS+ TE+DL K F YG +
Sbjct: 165 EDEEEDPSKQETLLQIKRERKRLLKDKNRKKRARIVIRNLSFQATEEDLKKHFSPYGSVE 224
Query: 365 EVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGR 406
E+ + + + K G A + F + A +A + + L R
Sbjct: 225 EIRI-LKRSDGKNIGCAFLQFEHVQSAAKAIHYTNLQPLLNR 265
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 174/425 (40%), Gaps = 81/425 (19%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
++ T+E LK F G+V ++++ ++GK AF+ + A A+ Y N + +
Sbjct: 206 FQATEEDLKKHFSPYGSVEEIRILKRSDGKNIGCAFLQFEHVQSAAKAIHYTNLQPLLNR 265
Query: 87 RIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPT 146
I V+ S +K+ ++S ++ + +K E D + + N
Sbjct: 266 PIIVDWAV---------SKNKFVQNNSENKQEDKVR----VKVEEESDIED---TDNTKQ 309
Query: 147 FSDFLQLHGKD-----VSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKS 201
+ +L G+D V++ + N +E E +NE N+++ + + + + K
Sbjct: 310 LNLNGELEGEDENFDIVTENVEFDNDCLDEVETDNE----NEVSGNNEENEDEEQGKIDV 365
Query: 202 KDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAY---FKPLPLASVRTTFL 258
K+T P S VS+ TI +KN+P +K +LK Y + P+ A V L
Sbjct: 366 KETKPRFKS-HDVSEG-------KTIFLKNVPFSIKNDELKKYMERYGPICYALVCIDPL 417
Query: 259 -----GMAYIGFK---DEKNC----------------NKALNKN--------KSFWKGKQ 286
G A++ FK D + C ++AL++N K + +
Sbjct: 418 TEFSRGTAFVKFKNVEDAEKCLSAGNELQMEDQILEAHRALDRNEIENKANSKQYKQKDS 477
Query: 287 LNIYKYSKDNSAKYSGAADDNNNASM-ENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLS 345
N+Y + S AA + M + ++ + WKSQ ++ R+ V NL
Sbjct: 478 RNLYLVKEGVVLAGSSAAVGVSATDMSKRLQIERWKSQ--ILRNLNMFVSRVRLVVHNLP 535
Query: 346 YTVTEDDLTKLFEKYGPLAEV-----ILPIDKETD-----KTKGFALVTFLMPEHATQAY 395
T+ +D K+ E++ P V I+ K D K+K + V+F E A +
Sbjct: 536 ATLNDDKFRKILERHSPPTAVIREARIMRDPKNVDLKGVWKSKEYGFVSFTKHEDALETL 595
Query: 396 QHLDG 400
+ ++
Sbjct: 596 RSVNN 600
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 648 QNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFK 707
++ S E +++KR + L + KR ++I++RN+ FQA + ++++ F
Sbjct: 169 EDPSKQETLLQIKRERKRLLKDKNRKKR----------ARIVIRNLSFQATEEDLKKHFS 218
Query: 708 AFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+G ++ +R+ K+ G + G F++F A +A+ L R ++++WA
Sbjct: 219 PYGSVEEIRILKRSDGKNI--GCAFLQFEHVQSAAKAI-HYTNLQPLLNRPIIVDWA 272
>gi|367026828|ref|XP_003662698.1| hypothetical protein MYCTH_2303648 [Myceliophthora thermophila ATCC
42464]
gi|347009967|gb|AEO57453.1| hypothetical protein MYCTH_2303648 [Myceliophthora thermophila ATCC
42464]
Length = 802
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 22/205 (10%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++++L ++T +S+ F + P+ TV DPK+ S GYGFV F E +
Sbjct: 42 LFVRSLPPDATSESLVEFFSQHYPVKHATVVL--DPKTK---TSRGYGFVSFADPEDAAE 96
Query: 643 ALKVLQNSSLDEHQIELK------RSNRNLESEATT------VKRKSSNVAKQTGSKILV 690
A + L+N +++L R ++ E + KR++ + K+++
Sbjct: 97 AKEKLKNELFHGRRLQLDIALPRLRDASKVDPEVVSKTIEEKRKREAELELARKPPKLII 156
Query: 691 RNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
RN+P+ K+ E + +LF++FG++KFV LP G GFGFV + A+RAM+A+
Sbjct: 157 RNLPWSIKKPEQLAKLFQSFGKVKFVDLPND---KGKLAGFGFVTLRGRKNAERAMEAIN 213
Query: 750 QSTHLYGRRLVLEWAEEADNVEDIR 774
+ GR L ++WA + E ++
Sbjct: 214 GKV-VDGRTLAVDWAVDKQTWEKLK 237
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T + L + F ++ P+ + +D +T ++G+ V+F PE A +A + L
Sbjct: 42 LFVRSLPPDATSESLVEFFSQHYPVKHATVVLDPKTKTSRGYGFVSFADPEDAAEAKEKL 101
Query: 399 DGTVFLGRMLHLIPGKPK-ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
+F GR L L P+ + VD +V E K ++ AR ++++NLP+
Sbjct: 102 KNELFHGRRLQLDIALPRLRDASKVDPEVVSKTIEEKRKREAELELARKPPKLIIRNLPW 161
Query: 458 RT-LPTDLKALFEPFGDLGRVLVP----PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVP 512
P L LF+ FG + V +P G V + A+ A ++
Sbjct: 162 SIKKPEQLAKLFQSFGKVKFVDLPNDKGKLAGFGFVTLRGRKNAERAMEAINGKVVDGRT 221
Query: 513 LYLEWA 518
L ++WA
Sbjct: 222 LAVDWA 227
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
TT++I+NL +++T+++++ HF + G + V + + P G GFV F E
Sbjct: 364 TTIFIRNLPYSTTDETLKAHFTRFGRVRYARVVMDRTTEKPA-----GTGFVCFVREEDF 418
Query: 641 NQALK 645
LK
Sbjct: 419 KACLK 423
>gi|255080002|ref|XP_002503581.1| predicted protein [Micromonas sp. RCC299]
gi|226518848|gb|ACO64839.1| predicted protein [Micromonas sp. RCC299]
Length = 597
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 163/425 (38%), Gaps = 106/425 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++ +L TE L +LF GP+ + + D T ++ G+A V F A +A L
Sbjct: 22 LYCGDLDSNCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGADAARAIDVL 81
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 82 NFNVVNGKPIRIMYSQRDPALRKSGVGN----------------------------IFIK 113
Query: 454 NLPYRTLPTDLKALFEPFGDLG-----RVLVPPYGIT---GLVEFLQKNQAKAAFNSLAY 505
NL D KAL++ F G +V G++ G V+F ++ A+ A + +
Sbjct: 114 NLDKEI---DNKALYDTFSQFGNIVSAKVAADGQGVSKGYGFVQFAEQEAAQQAIDKVNG 170
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEV 565
+ +Y+ G F + GE G G P
Sbjct: 171 MLLNDKQVYV-----GPF---------------QRRGERG---------------GGPTT 195
Query: 566 EENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFL 625
NV Y+KNL+ + ED ++ F G + SV + + + KS G
Sbjct: 196 FNNV--------------YVKNLHESVDEDKLKEVFGAVGKLTSVVIMKDGEGKSKG--- 238
Query: 626 SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL-----KRSNRNLESEATTVKRKSSNV 680
+GFV F E+ ++A++ L E + + K++ R E +A + +
Sbjct: 239 ---FGFVCFEESEAASEAVEKLDGYDKIEDKAWVVCRAQKKAEREAELKAKFDAERRERL 295
Query: 681 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 740
K G+ + ++N+ +++ ELF FG + R+ + SG RG FV F + +E
Sbjct: 296 EKMAGANLYIKNLEDTVDDAKLRELFAEFGTITSCRVMRD--ASGASRGSAFVAFSSADE 353
Query: 741 AKRAM 745
A RA+
Sbjct: 354 ATRAV 358
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ ++ F + G I S VA + GQ +S GYGFVQF +E+ Q
Sbjct: 110 IFIKNLDKEIDNKALYDTFSQFGNIVSAKVA------ADGQGVSKGYGFVQFAEQEAAQQ 163
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A+ + L++ Q+ + R R T + + V+N+ + ++
Sbjct: 164 AIDKVNGMLLNDKQVYVGPFQR----------RGERGGGPTTFNNVYVKNLHESVDEDKL 213
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+E+F A G+L V + K G G +GFGFV F A A++ L
Sbjct: 214 KEVFGAVGKLTSVVIMKD--GEGKSKGFGFVCFEESEAASEAVEKL 257
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY +L+ N TE + F GP+ S+ V R + S+GY +V F
Sbjct: 20 TSLYCGDLDSNCTEAQLYELFSTIGPVVSIRVCRDLITRR-----SLGYAYVNFQQGADA 74
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A+ VL + ++ I + S R+ RKS I ++N+ +
Sbjct: 75 ARAIDVLNFNVVNGKPIRIMYSQRD------PALRKSGV------GNIFIKNLDKEIDNK 122
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ + F FG + ++ G G+ +G+GFV+F + A++A+
Sbjct: 123 ALYDTFSQFGNIVSAKVAAD--GQGVSKGYGFVQFAEQEAAQQAI 165
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 16/187 (8%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NL +V ED L ++F G L V++ D E K+KGF V F E A++A + L
Sbjct: 199 VYVKNLHESVDEDKLKEVFGAVGKLTSVVIMKDGEG-KSKGFGFVCFEESEAASEAVEKL 257
Query: 399 DGTVFLGRMLHLI--PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
DG + ++ K E E + K ER +E + + +KNL
Sbjct: 258 DGYDKIEDKAWVVCRAQKKAEREAELKAKFDAERRER--------LEKMAGANLYIKNLE 309
Query: 457 YRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTKFKEV 511
L+ LF FG + RV+ G + V F ++A A +
Sbjct: 310 DTVDDAKLRELFAEFGTITSCRVMRDASGASRGSAFVAFSSADEATRAVTEMNGKMAGTK 369
Query: 512 PLYLEWA 518
PLY+ A
Sbjct: 370 PLYVALA 376
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 143/404 (35%), Gaps = 98/404 (24%)
Query: 249 PLASVRTT-------FLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKY 300
P+ S+R LG AY+ F+ + +A++ N + GK + I +D + +
Sbjct: 45 PVVSIRVCRDLITRRSLGYAYVNFQQGADAARAIDVLNFNVVNGKPIRIMYSQRDPALRK 104
Query: 301 SGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
SG G IF++NL + L F ++
Sbjct: 105 SGV---------------------------------GNIFIKNLDKEIDNKALYDTFSQF 131
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
G + + D + +KG+ V F E A QA ++G + + +++ P + + G
Sbjct: 132 GNIVSAKVAADGQ-GVSKGYGFVQFAEQEAAQQAIDKVNGMLLNDKQVYVGPFQRRGERG 190
Query: 421 NVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP 480
FN V VKNL LK +F G L V++
Sbjct: 191 G------------GPTTFNNV---------YVKNLHESVDEDKLKEVFGAVGKLTSVVI- 228
Query: 481 PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
++ + K+ + F+E E A E V EK G +K +++
Sbjct: 229 ----------MKDGEGKS--KGFGFVCFEES----EAASEAV-----EKLDGYDKIEDKA 267
Query: 541 EGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRH 600
++K E AE + + + E E E LYIKNL + +R
Sbjct: 268 WVVCRAQKKAEREAE-------LKAKFDAERRERLEKMAGANLYIKNLEDTVDDAKLREL 320
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
F + G I S V R S G FV F + + +A+
Sbjct: 321 FAEFGTITSCRVMRDASGASRGS------AFVAFSSADEATRAV 358
>gi|238483099|ref|XP_002372788.1| nucleic acid-binding protein [Aspergillus flavus NRRL3357]
gi|220700838|gb|EED57176.1| nucleic acid-binding protein [Aspergillus flavus NRRL3357]
Length = 227
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 575 REPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQF 634
+EP+P T+++ NL ++ T D +R+ +K G + SV + + +S G+G+VQF
Sbjct: 41 KEPDPKETVFVGNLFYDVTADDLRKQMEKYGVVESVYIT------FDNRGMSKGFGYVQF 94
Query: 635 YTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIP 694
+ +S +A+ + + ++ + + N++ + + + N+P
Sbjct: 95 DSIDSARRAIDAMHMRVYEGRRVIVAFAQNNIDQHRNL---------RPISRTLYLGNLP 145
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
F+ ++ ELF+ + VR+ +G+ RGF EFI A+ A + L +
Sbjct: 146 FEMTDRDINELFRDIVNVIDVRVSVDR-RTGMFRGFAHAEFINVESARAAFEILSRKAP- 203
Query: 755 YGRRLVLEWAE---EADNVED 772
YGR+L L++++ AD +ED
Sbjct: 204 YGRKLRLDYSQTNRRADRLED 224
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 70/172 (40%), Gaps = 27/172 (15%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV NL Y VT DDL K EKYG + V + D +KGF V F + A +A +
Sbjct: 49 VFVGNLFYDVTADDLRKQMEKYGVVESVYITFDNRG-MSKGFGYVQFDSIDSARRAIDAM 107
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
V+ GR +V ++ +D + R + + NLP+
Sbjct: 108 HMRVYEGR------------------RVIVAFAQNNIDQHRNLRPI--SRTLYLGNLPFE 147
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAFNSLA 504
D+ LF ++ V V TG+ EF+ A+AAF L+
Sbjct: 148 MTDRDINELFRDIVNVIDVRVSVDRRTGMFRGFAHAEFINVESARAAFEILS 199
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 306 DNNNASMENIKAKHWKSQEDS---VQFAEDIAESGR--------IFVRNLSYTVTEDDLT 354
D+ +++ I A H + E V FA++ + R +++ NL + +T+ D+
Sbjct: 95 DSIDSARRAIDAMHMRVYEGRRVIVAFAQNNIDQHRNLRPISRTLYLGNLPFEMTDRDIN 154
Query: 355 KLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+LF + +V + +D+ T +GFA F+ E A A++ L GR L L
Sbjct: 155 ELFRDIVNVIDVRVSVDRRTGMFRGFAHAEFINVESARAAFEILSRKAPYGRKLRL 210
>gi|195042014|ref|XP_001991348.1| GH12602 [Drosophila grimshawi]
gi|193901106|gb|EDV99972.1| GH12602 [Drosophila grimshawi]
Length = 511
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 174 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 233
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 234 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 279
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 280 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 339
Query: 750 QST 752
+T
Sbjct: 340 GTT 342
>gi|62473376|ref|NP_001014713.1| embryonic lethal abnormal vision, isoform B [Drosophila
melanogaster]
gi|221329608|ref|NP_001138142.1| embryonic lethal abnormal vision, isoform C [Drosophila
melanogaster]
gi|2961399|emb|CAA18091.1| EG:65F1.2 [Drosophila melanogaster]
gi|61677860|gb|AAX52472.1| embryonic lethal abnormal vision, isoform B [Drosophila
melanogaster]
gi|220901638|gb|ACL82875.1| embryonic lethal abnormal vision, isoform C [Drosophila
melanogaster]
Length = 479
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 142 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 201
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 202 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 247
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 248 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 307
Query: 750 QST 752
+T
Sbjct: 308 GTT 310
>gi|195469519|ref|XP_002099685.1| GE16581 [Drosophila yakuba]
gi|194187209|gb|EDX00793.1| GE16581 [Drosophila yakuba]
Length = 478
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 141 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 200
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 201 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 246
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 247 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 306
Query: 750 QST 752
+T
Sbjct: 307 GTT 309
>gi|195402031|ref|XP_002059614.1| embryonic lethal, abnormal vision [Drosophila virilis]
gi|194147321|gb|EDW63036.1| embryonic lethal, abnormal vision [Drosophila virilis]
Length = 516
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 179 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 238
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 239 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 284
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 285 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 344
Query: 750 QST 752
+T
Sbjct: 345 GTT 347
>gi|429962103|gb|ELA41647.1| hypothetical protein VICG_01280 [Vittaforma corneae ATCC 50505]
Length = 344
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 27/142 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F++++ Y + EDDL + ++ G + V +P+ + + KGFA V F A +A + L
Sbjct: 96 VFIKDIGYDLREDDLRQQMQRLGEVIRVTIPMTHDLRRNKGFAYVEFKRLADAQKALK-L 154
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
DGT LGR + + KP+EN RK+ + VKNL Y
Sbjct: 155 DGTELLGRKVAVFQAKPREN--------------RKI------------YTLFVKNLSYT 188
Query: 459 TLPTDLKALFEPFGDLGRVLVP 480
T ++LK FE FG + + +P
Sbjct: 189 TTKSELKEYFERFGKIYNISLP 210
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKE-TDKTKGFALVTFLMPEHATQAYQH 397
+FV+NLSYT T+ +L + FE++G + + LP+D E T++ KGF + + P+ T+A
Sbjct: 180 LFVKNLSYTTTKSELKEYFERFGKIYNISLPVDNENTERNKGFCFIEYTEPDPITRA--- 236
Query: 398 LDGTVFLG-RMLHLIPGKPKEN 418
L G L R L++I G E+
Sbjct: 237 LKGKHTLNERTLYVIEGNKNED 258
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 46/240 (19%)
Query: 551 ENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASV 610
E T E++ Q G EE +E+ +R T++IK++ ++ ED +R+ ++ G + V
Sbjct: 73 ETTNEDETQSGS---EEECDEETQR------TVFIKDIGYDLREDDLRQQMQRLGEVIRV 123
Query: 611 TVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNL 666
T+ D + + G+ +V+F +ALK L + L ++ + R NR +
Sbjct: 124 TIPMTHDLRR-----NKGFAYVEFKRLADAQKALK-LDGTELLGRKVAVFQAKPRENRKI 177
Query: 667 ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 726
+ + V+N+ + +SE++E F+ FG++ + LP +
Sbjct: 178 YT-------------------LFVKNLSYTTTKSELKEYFERFGKIYNISLPVDNENTER 218
Query: 727 HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKR--TNRYFGTA 784
++GF F+E+ + RA+K H R + + E + ED K+ T+R +G +
Sbjct: 219 NKGFCFIEYTEPDPITRALKG----KHTLNERTL--YVIEGNKNEDRNKKRSTDRLYGRS 272
>gi|422303993|ref|ZP_16391342.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9806]
gi|425468337|ref|ZP_18847364.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9701]
gi|389790955|emb|CCI13203.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9806]
gi|389885016|emb|CCI34745.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9701]
Length = 100
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL Y VT DDL ++F +YG ++ V LP+D+ET K +GF V E +A + L
Sbjct: 3 IYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIETL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR + + +PKE+
Sbjct: 63 DGAEWMGRQMKVNKARPKED 82
>gi|198468704|ref|XP_001354795.2| GA18065 [Drosophila pseudoobscura pseudoobscura]
gi|198146532|gb|EAL31850.2| GA18065 [Drosophila pseudoobscura pseudoobscura]
Length = 496
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 88/200 (44%), Gaps = 28/200 (14%)
Query: 561 GVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK---- 616
GVP+ N E R T L + L TED IR F G I SV + R K
Sbjct: 148 GVPQNGSN-GSTETR-----TNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVY 201
Query: 617 ----DPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
+P++P + S+GYGFV + + QA+ VL L I++ +
Sbjct: 202 IDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------S 249
Query: 673 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
R SS+ K G+ + V +P Q E+E +F FG + R+ + +G GF
Sbjct: 250 FARPSSDAIK--GANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGF 307
Query: 733 VEFITKNEAKRAMKALCQST 752
+ F + EA RA+ AL +T
Sbjct: 308 IRFDKREEATRAIIALNGTT 327
>gi|440684828|ref|YP_007159623.1| RNP-1 like RNA-binding protein [Anabaena cylindrica PCC 7122]
gi|428681947|gb|AFZ60713.1| RNP-1 like RNA-binding protein [Anabaena cylindrica PCC 7122]
Length = 102
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT+D+LT +F +YG + V LP D+ET K +GF V E T A L
Sbjct: 3 IYVGNLSYEVTQDNLTAVFAEYGSVKRVQLPTDRETGKLRGFGFVEMGTDEEETTAIDAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KP+E+
Sbjct: 63 DGAEWMGRDLKVNKAKPRED 82
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ ++ Q + +F +G +K V+LP +G RGFGFVE T E A+ A
Sbjct: 3 IYVGNLSYEVTQDNLTAVFAEYGSVKRVQLPTDRE-TGKLRGFGFVEMGTDEEETTAIDA 61
Query: 748 LCQSTHLYGRRL 759
L GR L
Sbjct: 62 L-DGAEWMGRDL 72
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTE-GKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y++TQ+ L A F E G+V VQL E GK R F F+ +++ A+D +
Sbjct: 10 YEVTQDNLTAVFAEYGSVKRVQLPTDRETGKLRGFGFVEMGTDEEETTAIDALDGAEWMG 69
Query: 86 SRIKVEKC 93
+KV K
Sbjct: 70 RDLKVNKA 77
>gi|195165322|ref|XP_002023488.1| GL20165 [Drosophila persimilis]
gi|194105593|gb|EDW27636.1| GL20165 [Drosophila persimilis]
Length = 496
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 88/200 (44%), Gaps = 28/200 (14%)
Query: 561 GVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK---- 616
GVP+ N E R T L + L TED IR F G I SV + R K
Sbjct: 148 GVPQNGSN-GSTETR-----TNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVY 201
Query: 617 ----DPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
+P++P + S+GYGFV + + QA+ VL L I++ +
Sbjct: 202 IDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------S 249
Query: 673 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
R SS+ K G+ + V +P Q E+E +F FG + R+ + +G GF
Sbjct: 250 FARPSSDAIK--GANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGF 307
Query: 733 VEFITKNEAKRAMKALCQST 752
+ F + EA RA+ AL +T
Sbjct: 308 IRFDKREEATRAIIALNGTT 327
>gi|124388985|gb|ABN10621.1| elav [Drosophila recens]
Length = 401
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 96 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 155
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 156 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 201
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 202 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 261
Query: 750 QST 752
+T
Sbjct: 262 GTT 264
>gi|124388947|gb|ABN10602.1| elav [Drosophila recens]
gi|124388971|gb|ABN10614.1| elav [Drosophila recens]
gi|124389005|gb|ABN10631.1| elav [Drosophila recens]
gi|124389007|gb|ABN10632.1| elav [Drosophila recens]
gi|124389009|gb|ABN10633.1| elav [Drosophila recens]
gi|124389011|gb|ABN10634.1| elav [Drosophila recens]
gi|124389013|gb|ABN10635.1| elav [Drosophila recens]
gi|124389015|gb|ABN10636.1| elav [Drosophila recens]
gi|124389017|gb|ABN10637.1| elav [Drosophila recens]
gi|124389019|gb|ABN10638.1| elav [Drosophila recens]
gi|124389021|gb|ABN10639.1| elav [Drosophila recens]
gi|124389023|gb|ABN10640.1| elav [Drosophila recens]
gi|124389025|gb|ABN10641.1| elav [Drosophila recens]
gi|124389027|gb|ABN10642.1| elav [Drosophila recens]
gi|124389029|gb|ABN10643.1| elav [Drosophila recens]
gi|124389031|gb|ABN10644.1| elav [Drosophila recens]
Length = 401
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 96 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 155
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 156 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 201
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 202 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 261
Query: 750 QST 752
+T
Sbjct: 262 GTT 264
>gi|124388951|gb|ABN10604.1| elav [Drosophila recens]
Length = 400
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 95 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 154
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 155 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 200
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 201 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 260
Query: 750 QST 752
+T
Sbjct: 261 GTT 263
>gi|124388979|gb|ABN10618.1| elav [Drosophila recens]
gi|124388981|gb|ABN10619.1| elav [Drosophila recens]
gi|124389003|gb|ABN10630.1| elav [Drosophila recens]
Length = 401
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 96 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 155
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 156 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 201
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 202 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 261
Query: 750 QST 752
+T
Sbjct: 262 GTT 264
>gi|124388963|gb|ABN10610.1| elav [Drosophila recens]
Length = 400
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 95 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 154
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 155 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 200
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 201 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 260
Query: 750 QST 752
+T
Sbjct: 261 GTT 263
>gi|124388957|gb|ABN10607.1| elav [Drosophila recens]
gi|124388977|gb|ABN10617.1| elav [Drosophila recens]
gi|124388991|gb|ABN10624.1| elav [Drosophila recens]
Length = 403
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 98 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 157
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 158 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 203
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 204 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 263
Query: 750 QST 752
+T
Sbjct: 264 GTT 266
>gi|124388959|gb|ABN10608.1| elav [Drosophila recens]
Length = 398
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 93 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 152
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 153 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 198
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 199 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 258
Query: 750 QST 752
+T
Sbjct: 259 GTT 261
>gi|124389033|gb|ABN10645.1| elav [Drosophila subquinaria]
Length = 405
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 100 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 159
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 160 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 205
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 206 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 265
Query: 750 QST 752
+T
Sbjct: 266 GTT 268
>gi|124388953|gb|ABN10605.1| elav [Drosophila recens]
Length = 401
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 96 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 155
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 156 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 201
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 202 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 261
Query: 750 QST 752
+T
Sbjct: 262 GTT 264
>gi|124388961|gb|ABN10609.1| elav [Drosophila recens]
Length = 400
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 95 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 154
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 155 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 200
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 201 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 260
Query: 750 QST 752
+T
Sbjct: 261 GTT 263
>gi|124388983|gb|ABN10620.1| elav [Drosophila recens]
gi|124388999|gb|ABN10628.1| elav [Drosophila recens]
Length = 404
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 99 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 158
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 159 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 204
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 205 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 264
Query: 750 QST 752
+T
Sbjct: 265 GTT 267
>gi|124388967|gb|ABN10612.1| elav [Drosophila recens]
gi|124388993|gb|ABN10625.1| elav [Drosophila recens]
Length = 399
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 94 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 153
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 154 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 199
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 200 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 259
Query: 750 QST 752
+T
Sbjct: 260 GTT 262
>gi|124388997|gb|ABN10627.1| elav [Drosophila recens]
Length = 403
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 98 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 157
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 158 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 203
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 204 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 263
Query: 750 QST 752
+T
Sbjct: 264 GTT 266
>gi|124388955|gb|ABN10606.1| elav [Drosophila recens]
gi|124388965|gb|ABN10611.1| elav [Drosophila recens]
gi|124388973|gb|ABN10615.1| elav [Drosophila recens]
Length = 397
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 92 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 151
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 152 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 197
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 198 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 257
Query: 750 QST 752
+T
Sbjct: 258 GTT 260
>gi|124388987|gb|ABN10622.1| elav [Drosophila recens]
Length = 402
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 97 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 156
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 157 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 202
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 203 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 262
Query: 750 QST 752
+T
Sbjct: 263 GTT 265
>gi|124388969|gb|ABN10613.1| elav [Drosophila recens]
gi|124388975|gb|ABN10616.1| elav [Drosophila recens]
gi|124388989|gb|ABN10623.1| elav [Drosophila recens]
gi|124389001|gb|ABN10629.1| elav [Drosophila recens]
Length = 402
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 97 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 156
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 157 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 202
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 203 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 262
Query: 750 QST 752
+T
Sbjct: 263 GTT 265
>gi|124388949|gb|ABN10603.1| elav [Drosophila recens]
Length = 389
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 84 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 143
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 144 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 189
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 190 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 249
Query: 750 QST 752
+T
Sbjct: 250 GTT 252
>gi|124388995|gb|ABN10626.1| elav [Drosophila recens]
Length = 403
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 98 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 157
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 158 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 203
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 204 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 263
Query: 750 QST 752
+T
Sbjct: 264 GTT 266
>gi|195130285|ref|XP_002009582.1| GI15436 [Drosophila mojavensis]
gi|193908032|gb|EDW06899.1| GI15436 [Drosophila mojavensis]
Length = 475
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 138 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 197
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 198 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 243
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 244 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 303
Query: 750 QST 752
+T
Sbjct: 304 GTT 306
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 167/422 (39%), Gaps = 93/422 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L + V E L LF + P+ + D+ + G+A V F P+ A +A + L
Sbjct: 35 LYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAKAMEVL 94
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + ++ H + R+ N + +KNL +
Sbjct: 95 NFTPLNGKPIRIM-------------FSHRDPTTRRSGHAN----------VFIKNLDTK 131
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL+E F G VL + G ++F + A++A N L +
Sbjct: 132 I---DNKALYETFASFGPVLSCKVAVDNNGQSKGYGFIQFENEEDAQSAINRLNGMLVND 188
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G F E+ + G P+
Sbjct: 189 REVYV-----GPFVRRLERIEAN---------------------------GSPKF----- 211
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
T +Y+KNL+ ++++ +++ F G I S V + ++ K S G+G
Sbjct: 212 ----------TNVYVKNLSETTSDEDLKKIFSSYGAITSAIVMKDQNGK------SRGFG 255
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGS 686
FV F + +S A++ L + + + R+ R E EA + ++S K +
Sbjct: 256 FVNFQSPDSAAAAVEKLNGMTFSDKVWYVGRAQRKGEREAELKAKFEQERNSRYEKMKAA 315
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+ ++N+ + ++ELF FG + ++ + GL +G GFV F T EA RA+
Sbjct: 316 NLYLKNLGDTIDEERLKELFSEFGSITSCKV--MLDQQGLSKGSGFVAFSTPEEASRALS 373
Query: 747 AL 748
+
Sbjct: 374 EM 375
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 150/365 (41%), Gaps = 80/365 (21%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRT-------TFLGMAYIGFKDEKNCNKALNK 277
++ V +L VK+ L F + P+ S R T LG AY+ F + ++ KA+
Sbjct: 34 SLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAKAMEV 93
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAAD----------DN------------------- 307
N + GK + I +D + + SG A+ DN
Sbjct: 94 LNFTPLNGKPIRIMFSHRDPTTRRSGHANVFIKNLDTKIDNKALYETFASFGPVLSCKVA 153
Query: 308 --NNASMENIKAKHWKSQEDS----------------------VQFAEDIAESG-----R 338
NN + ++++ED+ V+ E I +G
Sbjct: 154 VDNNGQSKGYGFIQFENEEDAQSAINRLNGMLVNDREVYVGPFVRRLERIEANGSPKFTN 213
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NLS T +++DL K+F YG + I+ + + K++GF V F P+ A A + L
Sbjct: 214 VYVKNLSETTSDEDLKKIFSSYGAITSAIV-MKDQNGKSRGFGFVNFQSPDSAAAAVEKL 272
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G F ++ ++ G+ + +G + ++ + + + ++ A + +KNL
Sbjct: 273 NGMTFSDKVWYV--GR-AQRKGEREAELKAKFEQERNSRYEKMKAAN----LYLKNLGDT 325
Query: 459 TLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
LK LF FG + +V++ G+ +G V F +A A + + + PL
Sbjct: 326 IDEERLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALSEMNGKMIGKKPL 385
Query: 514 YLEWA 518
Y+ A
Sbjct: 386 YVAIA 390
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 88/197 (44%), Gaps = 28/197 (14%)
Query: 223 QYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKDEKNCNK 273
++ + VKNL +DLK F ++ + + G ++ F+ +
Sbjct: 210 KFTNVYVKNLSETTSDEDLKKIFSSY--GAITSAIVMKDQNGKSRGFGFVNFQSPDSAAA 267
Query: 274 ALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI 333
A+ K LN +S + Y G A E +KAK QE + ++ +
Sbjct: 268 AVEK---------LNGMTFS--DKVWYVGRAQRKGEREAE-LKAKF--EQERNSRYEK-- 311
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
++ ++++NL T+ E+ L +LF ++G + + +D++ +KG V F PE A++
Sbjct: 312 MKAANLYLKNLGDTIDEERLKELFSEFGSITSCKVMLDQQ-GLSKGSGFVAFSTPEEASR 370
Query: 394 AYQHLDGTVFLGRMLHL 410
A ++G + + L++
Sbjct: 371 ALSEMNGKMIGKKPLYV 387
>gi|156536405|gb|ABU80357.1| embryonic lethal abnormal vision [Drosophila montana]
Length = 346
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 116 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 175
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 176 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 221
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 222 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 281
Query: 750 QST 752
+T
Sbjct: 282 GTT 284
>gi|156536403|gb|ABU80356.1| embryonic lethal abnormal vision [Drosophila littoralis]
Length = 334
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 104 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 163
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 164 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 209
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 210 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 269
Query: 750 QST 752
+T
Sbjct: 270 GTT 272
>gi|57231478|gb|AAW47452.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 334
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 104 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 163
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 164 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 209
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 210 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 269
Query: 750 QST 752
+T
Sbjct: 270 GTT 272
>gi|57231504|gb|AAW47465.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 334
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 104 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 163
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 164 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 209
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 210 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 269
Query: 750 QST 752
+T
Sbjct: 270 GTT 272
>gi|57231496|gb|AAW47461.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 333
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 103 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 162
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 163 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 208
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 209 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 268
Query: 750 QST 752
+T
Sbjct: 269 GTT 271
>gi|57231470|gb|AAW47448.1| embryonic lethal abnormal vision protein [Drosophila virilis]
Length = 345
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 115 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 174
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 175 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 220
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 221 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 280
Query: 750 QST 752
+T
Sbjct: 281 GTT 283
>gi|57231538|gb|AAW47482.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 340
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 110 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 169
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 170 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 215
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 216 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 275
Query: 750 QST 752
+T
Sbjct: 276 GTT 278
>gi|57231546|gb|AAW47486.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 326
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 96 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 155
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 156 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 201
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 202 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 261
Query: 750 QST 752
+T
Sbjct: 262 GTT 264
>gi|57231572|gb|AAW47499.1| embryonic lethal abnormal vision protein [Drosophila ezoana]
Length = 343
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 113 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 172
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 173 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 218
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 219 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 278
Query: 750 QST 752
+T
Sbjct: 279 GTT 281
>gi|57231474|gb|AAW47450.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231476|gb|AAW47451.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231480|gb|AAW47453.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231484|gb|AAW47455.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231486|gb|AAW47456.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231488|gb|AAW47457.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231490|gb|AAW47458.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231492|gb|AAW47459.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231494|gb|AAW47460.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231498|gb|AAW47462.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231500|gb|AAW47463.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231502|gb|AAW47464.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231506|gb|AAW47466.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231508|gb|AAW47467.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231510|gb|AAW47468.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231514|gb|AAW47470.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231516|gb|AAW47471.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231518|gb|AAW47472.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231520|gb|AAW47473.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231522|gb|AAW47474.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231524|gb|AAW47475.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231526|gb|AAW47476.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231530|gb|AAW47478.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231532|gb|AAW47479.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231534|gb|AAW47480.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231540|gb|AAW47483.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231542|gb|AAW47484.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231544|gb|AAW47485.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231548|gb|AAW47487.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231550|gb|AAW47488.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231552|gb|AAW47489.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231554|gb|AAW47490.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231556|gb|AAW47491.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231560|gb|AAW47493.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231562|gb|AAW47494.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231564|gb|AAW47495.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231568|gb|AAW47497.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 337
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 107 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 166
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 167 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 212
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 213 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 272
Query: 750 QST 752
+T
Sbjct: 273 GTT 275
>gi|57231472|gb|AAW47449.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231482|gb|AAW47454.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231512|gb|AAW47469.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231528|gb|AAW47477.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231536|gb|AAW47481.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231558|gb|AAW47492.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231566|gb|AAW47496.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231570|gb|AAW47498.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 338
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 108 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 167
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 168 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 213
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 214 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 273
Query: 750 QST 752
+T
Sbjct: 274 GTT 276
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 115/232 (49%), Gaps = 12/232 (5%)
Query: 534 EKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNST 593
E EK EE EE + + N + + + P + + +E E T +++ L++N
Sbjct: 152 EDEKVEETKEEAKPQANGNKRKAEEESIAPAKKARADGGDE---EATTNVFVGQLSWNVD 208
Query: 594 EDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLD 653
D ++ F+ CG + S V +D + S G+G+V+F ES +A++ S +D
Sbjct: 209 NDWLKSEFESCGEVVSARVVFDRDSQK-----SRGFGYVEFADLESSAKAIE-KDGSEID 262
Query: 654 EHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-VRNIPFQAKQSEVEELFKAFGEL 712
I + + + +EA + + N + ++ L + ++ F + +V E F G++
Sbjct: 263 GRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDV 322
Query: 713 KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+ VRLP +G +GFG+V+F + ++A A+KA+ + GR + +++A
Sbjct: 323 QSVRLPTDR-DTGAPKGFGYVQFSSVDDASAALKAM-NGAEIAGRAIRVDFA 372
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 210 SVPPVSKAPVH---KRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTF-------L 258
S+ P KA + + V L V LK+ F+ + S R F
Sbjct: 178 SIAPAKKARADGGDEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSR 237
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGK--QLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
G Y+ F D ++ KA+ K+ S G+ ++N K N A A N+ S
Sbjct: 238 GFGYVEFADLESSAKAIEKDGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPP--- 294
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
AE+ +++ +LS++VTED + + F ++G + V LP D++T
Sbjct: 295 -----------------AET--LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGA 335
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
KGF V F + A+ A + ++G GR + + PK++ G
Sbjct: 336 PKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFAPPKQDNG 379
>gi|119265|sp|P23241.1|ELAV_DROVI RecName: Full=Protein elav; AltName: Full=Embryonic lethal abnormal
visual protein
gi|157338|gb|AAA28505.1| ELAV [Drosophila virilis]
Length = 519
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 182 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 241
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 242 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 287
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 288 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 347
Query: 750 QST 752
+T
Sbjct: 348 GTT 350
>gi|18079265|ref|NP_525033.1| embryonic lethal abnormal vision, isoform A [Drosophila
melanogaster]
gi|386763527|ref|NP_001245447.1| embryonic lethal abnormal vision, isoform D [Drosophila
melanogaster]
gi|119264|sp|P16914.1|ELAV_DROME RecName: Full=Protein elav; AltName: Full=Embryonic lethal abnormal
visual protein
gi|157340|gb|AAA28506.1| elav protein [Drosophila melanogaster]
gi|4455922|emb|CAB37430.1| EG:65F1.2 [Drosophila melanogaster]
gi|15291955|gb|AAK93246.1| LD33076p [Drosophila melanogaster]
gi|22831422|gb|AAF45517.2| embryonic lethal abnormal vision, isoform A [Drosophila
melanogaster]
gi|220946076|gb|ACL85581.1| elav-PA [synthetic construct]
gi|220955740|gb|ACL90413.1| elav-PA [synthetic construct]
gi|383293116|gb|AFH07163.1| embryonic lethal abnormal vision, isoform D [Drosophila
melanogaster]
Length = 483
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 146 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 205
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 206 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 251
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 252 VSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 311
Query: 750 QST 752
+T
Sbjct: 312 GTT 314
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 115/232 (49%), Gaps = 12/232 (5%)
Query: 534 EKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNST 593
E EK EE EE + + N + + + P + + +E E T +++ L++N
Sbjct: 149 EDEKVEETKEEAKPQANGNKRKAEEESIAPAKKARADGGDE---EATTNVFVGQLSWNVD 205
Query: 594 EDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLD 653
D ++ F+ CG + S V +D + S G+G+V+F ES +A++ S +D
Sbjct: 206 NDWLKSEFESCGEVVSARVVFDRDSQK-----SRGFGYVEFADLESSAKAIE-KDGSEID 259
Query: 654 EHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-VRNIPFQAKQSEVEELFKAFGEL 712
I + + + +EA + + N + ++ L + ++ F + +V E F G++
Sbjct: 260 GRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDV 319
Query: 713 KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+ VRLP +G +GFG+V+F + ++A A+KA+ + GR + +++A
Sbjct: 320 QSVRLPTDR-DTGAPKGFGYVQFSSVDDASAALKAM-NGAEIAGRAIRVDFA 369
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 210 SVPPVSKAPVH---KRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTF-------L 258
S+ P KA + + V L V LK+ F+ + S R F
Sbjct: 175 SIAPAKKARADGGDEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSR 234
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGK--QLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
G Y+ F D ++ KA+ K+ S G+ ++N K N A A N+ S
Sbjct: 235 GFGYVEFADLESSAKAIEKDGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPP--- 291
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
AE+ +++ +LS++VTED + + F ++G + V LP D++T
Sbjct: 292 -----------------AET--LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGA 332
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
KGF V F + A+ A + ++G GR + + PK++ G
Sbjct: 333 PKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFAPPKQDNG 376
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 168/425 (39%), Gaps = 99/425 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L + VT+ L LF + G + V + D + ++ G+ V F P A +A L
Sbjct: 26 LYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMDVL 85
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T + + ++ H S RK A N I +KNL R
Sbjct: 86 NFTPLNNKPIRIM-------------YSHRDPSVRKSGAAN----------IFIKNLD-R 121
Query: 459 TLPTDLKALFEPFGDLGRVL-----VPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKE 510
+ D KAL++ F G +L + G++ G V+F + A++A + L +
Sbjct: 122 AI--DHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLND 179
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
P+Y+ G F +++ K
Sbjct: 180 KPVYV-----GHFQRKQDRDNALSNAKF-------------------------------- 202
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
+Y+KNL+ + T+D ++ F + G I S V R D K S +G
Sbjct: 203 ----------NNVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVDGK------SKCFG 246
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQI----ELKRSNRNLESEATTVKRKSSNVAKQTGS 686
FV F ++ +A++ L D+ + LK+ R LE + + V K G+
Sbjct: 247 FVNFENADAAAEAVEALNGKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGA 306
Query: 687 KILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ ++N+ ++ ELF FG + K +R P+ G+ RG GFV F T EA R
Sbjct: 307 NLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQ-----GISRGSGFVAFSTPEEATR 361
Query: 744 AMKAL 748
A+ +
Sbjct: 362 ALAEM 366
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 23/186 (12%)
Query: 567 ENVEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPG 622
ENV D P P+ T+LY+ +L+ + T+ + F + G + SV + R +
Sbjct: 6 ENVNNDVAAAPVPNQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQ-- 63
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK 682
S+GYG+V F +A+ VL + L+ I + S+R+ +V K
Sbjct: 64 ---SLGYGYVNFSNPHDAAKAMDVLNFTPLNNKPIRIMYSHRD------------PSVRK 108
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
+ I ++N+ + + F FG + ++ M SGL +G+GFV+F + A+
Sbjct: 109 SGAANIFIKNLDRAIDHKALYDTFSIFGNILSCKI--AMDASGLSKGYGFVQFENEESAQ 166
Query: 743 RAMKAL 748
A+ L
Sbjct: 167 SAIDKL 172
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 223 QYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALN---KNK 279
+++ + VKNL V DLK F T + + C +N +
Sbjct: 201 KFNNVYVKNLSESVTDDDLKNTF-----GEYGTITSAVVMRDVDGKSKCFGFVNFENADA 255
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
+ + LN K+ D+ Y G A +E +K +H +S +++V D +
Sbjct: 256 AAEAVEALNGKKF--DDKEWYVGKALKKYERELE-LKERHEQSMKETV----DKFYGANL 308
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
+++NL +VT++ L++LF ++G + + D + ++G V F PE AT+A ++
Sbjct: 309 YLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQ-GISRGSGFVAFSTPEEATRALAEMN 367
Query: 400 GTVFLGRMLHLIPGKPKE 417
G + G+ L++ P + KE
Sbjct: 368 GKMVAGKPLYVAPAQKKE 385
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A+ ++V+NLS +VT+DDL F +YG + ++ D + K+K F V F + A +
Sbjct: 200 AKFNNVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVD-GKSKCFGFVNFENADAAAE 258
Query: 394 AYQHLDGTVFLGRMLHLIPGKP-KENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
A + L+G F + ++ GK K+ E ++ + ER + + V+ + +
Sbjct: 259 AVEALNGKKFDDKEWYV--GKALKKYERELE------LKERHEQSMKETVDKFYGANLYL 310
Query: 453 KNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTK 507
KNL L LF FG + ++L P GI +G V F +A A +
Sbjct: 311 KNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEATRALAEMNGKM 370
Query: 508 FKEVPLYLEWAPEGVFAEAKEKSKGK 533
PLY+ AP A+ KE+ K +
Sbjct: 371 VAGKPLYV--AP----AQKKEERKAR 390
>gi|326470511|gb|EGD94520.1| pre-mRNA splicing factor (Prp24) [Trichophyton tonsurans CBS 112818]
Length = 1279
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 28/176 (15%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG----- 630
EP DTT+++ N + E+ IR F G IA V +F S+ +
Sbjct: 866 EPVTDTTIFVTNFPPTADENYIRELFHSYGEIAEV------------RFPSLKFNTHRRF 913
Query: 631 -FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
+VQF + S A ++ + D ++ +K S+ + +R++ + A + G +I
Sbjct: 914 CYVQFTSSSSAYAATELDKKDIGDGLELVVKISDPS--------QRQARSGAYEEGREIY 965
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
V NIP++ + ++ ELF A+G+++ VR+P K+ +G RGFGFV F TK+++ A+
Sbjct: 966 VCNIPYKTTEGDLVELFTAYGDVESVRIPTKV--NGETRGFGFVTFATKDQSTAAL 1019
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 22/196 (11%)
Query: 335 ESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
E GR I+V N+ Y TE DL +LF YG + V +P K +T+GF VTF + +T
Sbjct: 959 EEGREIYVCNIPYKTTEGDLVELFTAYGDVESVRIPT-KVNGETRGFGFVTFATKDQSTA 1017
Query: 394 AYQHLDGTVFLGRMLHL--------------IPGKPKENEGNV--DGKVHCCISERKL-D 436
A ++ F GR L++ I + + N +G L D
Sbjct: 1018 ALA-MNEKTFKGRELNVRLSTNTGAKRHHNTIVSRSESPATNAQSNGASTASPPPSSLPD 1076
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQA 496
+ E R R + + N+P ++AL EP G L ++ + P ++E+ + A
Sbjct: 1077 GQGKGKEDRHLRTLGLMNIPDTVNDARIRALAEPHGALVKINLRPDHQGAIIEYADTHDA 1136
Query: 497 KAAFNSLAYTKFKEVP 512
A SLA ++ P
Sbjct: 1137 GKA--SLALEGYEITP 1150
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 46/204 (22%)
Query: 544 EGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK 603
EGE E ++ +P VE + E ++ IKNL + + IR+ F+
Sbjct: 767 EGEPEVNGTVSKRAKGGAIPSVETRARDREH------ASVIIKNLPKDIPQVKIRQFFRD 820
Query: 604 CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN 663
CG + ++ + PG G ++F D H+ L
Sbjct: 821 CGKLNALQML-------PG---DSGSALLEF------------------DTHEDALAAGT 852
Query: 664 RN---LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
+N LE TV+ T + I V N P A ++ + ELF ++GE+ VR P
Sbjct: 853 KNQKVLEGNQVTVE-------PVTDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPSL 905
Query: 721 MVGSGLHRGFGFVEFITKNEAKRA 744
+ HR F +V+F + + A A
Sbjct: 906 KFNT--HRRFCYVQFTSSSSAYAA 927
>gi|119486604|ref|ZP_01620654.1| RNA-binding region [Lyngbya sp. PCC 8106]
gi|119456221|gb|EAW37353.1| RNA-binding region [Lyngbya sp. PCC 8106]
Length = 100
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+++ NL+Y VTEDDL +F YG + V +P D+ET +++GFA V T A + L
Sbjct: 3 VYIGNLAYEVTEDDLKSVFTDYGSVKRVHIPTDRETGRSRGFAFVEMDTDSEETSAIEEL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KP+EN
Sbjct: 63 DGAEWMGRDLKVNKAKPREN 82
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKEF--------------- 190
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 191 --------------TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 145/392 (36%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
++LF FG V++ SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KDLFGKFGPALSVKVMTDE--SGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYVG 264
Query: 763 WAEE 766
A++
Sbjct: 265 RAQK 268
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTF------LGMAYIGFKDEKNCNKA 274
+++ + +KN + + LK F P SV+ G ++ F+ ++ KA
Sbjct: 188 KEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKA 247
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
+++ GK+LN Y G A E +K K + ++D + + +
Sbjct: 248 VDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRKFEQMKQDRITRYQGV- 294
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDKTKGFALVTFLMPEHAT 392
++V+NL + ++ L K F +G + A+V++ E ++KGF V F PE AT
Sbjct: 295 ---NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGRSKGFGFVCFSSPEEAT 347
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKE 417
+A ++G + + L++ + KE
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQRKE 372
>gi|241358219|ref|XP_002408846.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215497412|gb|EEC06906.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 662
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 163/375 (43%), Gaps = 69/375 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK--TKGFALVTFLMPEHA----T 392
+ V+NL E L ++F GPL + DK +DK KG A VT+ A T
Sbjct: 12 LLVKNLPPDTKESKLEEIFGDIGPLKRCFIVRDK-SDKAECKGVAYVTYASAVDADAALT 70
Query: 393 QAYQHLDGTVFLGRMLH--LIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR-- 448
Q ++ G +LH L KP + G +E + A + AR KR
Sbjct: 71 QKFK------LGGNLLHVKLAASKP------LRGSAAAQKAEPRPRATKEERLARKKRKP 118
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVP--PYGIT---GLVEFLQKNQAKAAFNSL 503
++V+NL ++ T L+ F +GDL V +P P G V+F + A A N L
Sbjct: 119 RLIVRNLSFKANETVLRDCFGKYGDLVEVSIPKKPDGKMRGFAFVQFAETKSAIKAINGL 178
Query: 504 AYTKFKEVPLYLEWA-PEGVFAEAKE--KSKGKEKEKNEEEGEEGEEEK----KENTAEE 556
+ P+ +++ P+ + A + S K ++ N +E +G ++ E A E
Sbjct: 179 NASNISGRPVAVDFCLPKATYQNATQGQASASKAEQSNNDEDTDGSADETSVASETPAHE 238
Query: 557 DNQQGVPEVEENVEEDEE-----------------------REPEP-DT--TLYIKNLNF 590
D+ + + +N ++D + R+ +P DT TL+I+N++F
Sbjct: 239 DSASDLDDQGDNTDQDMDDEQSEEEGGSDEEDEDDDELHLKRKSQPGDTKNTLFIRNISF 298
Query: 591 NSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNS 650
+T++S+ K+ GP + DP + S G FV++ S+ + L+ Q+S
Sbjct: 299 ETTQESLNSLMKQFGPCRYCLLC--TDPVTEH---SKGSAFVRYVKDASVERCLQAAQSS 353
Query: 651 S---LDEHQIELKRS 662
+ LD ++ + R+
Sbjct: 354 AGLMLDGRRLSVARA 368
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
E +TL +KNL ++ E + F GP+ + R K K+ + G +V + +
Sbjct: 7 EKPSTLLVKNLPPDTKESKLEEIFGDIGPLKRCFIVRDKSDKAECK----GVAYVTYASA 62
Query: 638 ESLNQALKVLQNSSLDEHQIELK-RSNRNLESEATTVKRKSSNVA--------KQTGSKI 688
+ AL Q L + + +K +++ L A K + A K+ ++
Sbjct: 63 VDADAAL--TQKFKLGGNLLHVKLAASKPLRGSAAAQKAEPRPRATKEERLARKKRKPRL 120
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+VRN+ F+A ++ + + F +G+L V +PKK G RGF FV+F A +A+ L
Sbjct: 121 IVRNLSFKANETVLRDCFGKYGDLVEVSIPKK--PDGKMRGFAFVQFAETKSAIKAINGL 178
Query: 749 CQSTHLYGRRLVLEWA 764
++++ GR + +++
Sbjct: 179 -NASNISGRPVAVDFC 193
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLA--------SVRTTFLGMAYIGFKDEKNCNKALN 276
T++VKNLP K+ L+ F + PL S + G+AY+ + + + AL
Sbjct: 11 TLLVKNLPPDTKESKLEEIFGDIGPLKRCFIVRDKSDKAECKGVAYVTYASAVDADAALT 70
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
+ F G L K + + S AA + + + ++E+ + +
Sbjct: 71 QK--FKLGGNLLHVKLAASKPLRGSAAA--------QKAEPRPRATKEERLARKK---RK 117
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
R+ VRNLS+ E L F KYG L EV +P K K +GFA V F + A +A
Sbjct: 118 PRLIVRNLSFKANETVLRDCFGKYGDLVEVSIP-KKPDGKMRGFAFVQFAETKSAIKAIN 176
Query: 397 HLDGTVFLGR 406
L+ + GR
Sbjct: 177 GLNASNISGR 186
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
E EP T+++ L+++ ++ +++ F+ G + S V ++ G S GYG+V F
Sbjct: 158 EGEP-ATIFVGRLSWSIDDEWLKKEFEHIGGVVSARVIMER-----GTDRSRGYGYVDFE 211
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+ +A+K +Q +D +I + S + +K +V + + + N+ F
Sbjct: 212 DKSYAEKAIKEMQGKEIDGREINVDMSTSKPAAGNNDRAKKFGDVPSEPSETLFLGNLSF 271
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
A + + ELF +GE+ VR+P + +GFG+V++ +AK+A++ L Q ++
Sbjct: 272 NADRDAISELFSKYGEIISVRIPTHPE-TEQPKGFGYVQYTNVEDAKKALEGL-QGEYID 329
Query: 756 GRRLVLEWA 764
R + L+++
Sbjct: 330 NRPVRLDYS 338
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G Y+ F+D+ KA+ + +GK+++ + + D S A + N +AK
Sbjct: 204 GYGYVDFEDKSYAEKAIKE----MQGKEIDGREINVDMSTSKPAAGN--------NDRAK 251
Query: 319 HWKSQEDSVQFAEDIAE-SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
+F + +E S +F+ NLS+ D +++LF KYG + V +P ET++
Sbjct: 252 ---------KFGDVPSEPSETLFLGNLSFNADRDAISELFSKYGEIISVRIPTHPETEQP 302
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
KGF V + E A +A + L G R + L P+
Sbjct: 303 KGFGYVQYTNVEDAKKALEGLQGEYIDNRPVRLDYSTPR 341
>gi|326478692|gb|EGE02702.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 1545
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 28/176 (15%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG----- 630
EP DTT+++ N + E+ IR F G IA V +F S+ +
Sbjct: 872 EPVTDTTIFVTNFPPTADENYIRELFHSYGEIAEV------------RFPSLKFNTHRRF 919
Query: 631 -FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
+VQF + S A ++ + D ++ +K S+ + +R++ + A + G +I
Sbjct: 920 CYVQFTSSSSAYAATELDKKDIGDGLELVVKISDPS--------QRQARSGAYEEGREIY 971
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
V NIP++ + ++ ELF A+G+++ VR+P K+ +G RGFGFV F TK+++ A+
Sbjct: 972 VCNIPYKTTEGDLVELFTAYGDVESVRIPTKV--NGETRGFGFVTFATKDQSTAAL 1025
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 46/204 (22%)
Query: 544 EGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK 603
EGE E ++ +P VE + E ++ IKNL + + IR+ F+
Sbjct: 773 EGEPEVNGTVSKRAKGGAIPSVETRARDREH------ASVIIKNLPKDIPQVKIRQFFRD 826
Query: 604 CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN 663
CG + ++ + PG G ++F D H+ L
Sbjct: 827 CGKLNALQML-------PGD---SGSALLEF------------------DTHEDALAAGT 858
Query: 664 RN---LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
+N LE TV+ T + I V N P A ++ + ELF ++GE+ VR P
Sbjct: 859 KNQKVLEGNQVTVE-------PVTDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPSL 911
Query: 721 MVGSGLHRGFGFVEFITKNEAKRA 744
+ HR F +V+F + + A A
Sbjct: 912 KFNT--HRRFCYVQFTSSSSAYAA 933
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 22/196 (11%)
Query: 335 ESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
E GR I+V N+ Y TE DL +LF YG + V +P K +T+GF VTF + +T
Sbjct: 965 EEGREIYVCNIPYKTTEGDLVELFTAYGDVESVRIPT-KVNGETRGFGFVTFATKDQSTA 1023
Query: 394 AYQHLDGTVFLGRMLHL--------------IPGKPKENEGNV--DGKVHCCISERKL-D 436
A ++ F GR L++ I + + N +G L D
Sbjct: 1024 ALA-MNEKTFKGRELNVRLSTNTGAKRHQNTIVSRSESPATNAQSNGASTASPPPSSLPD 1082
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQA 496
+ E R R + + N+P ++AL EP G L ++ + P ++E+ + A
Sbjct: 1083 GQGKGKEDRHLRTLGLMNIPDTVNDARIRALAEPHGALVKINLRPDHQGAIIEYADTHDA 1142
Query: 497 KAAFNSLAYTKFKEVP 512
A SLA ++ P
Sbjct: 1143 GKA--SLALEGYEITP 1156
>gi|195439330|ref|XP_002067584.1| GK16120 [Drosophila willistoni]
gi|194163669|gb|EDW78570.1| GK16120 [Drosophila willistoni]
Length = 509
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK--------DPKSPGQFLSMGY 629
E T L + L TED IR F G I SV + R K +P++P + S+GY
Sbjct: 172 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGY 231
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
GFV + + QA+ VL L I++ + R SS+ K G+ +
Sbjct: 232 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLY 277
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V +P Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL
Sbjct: 278 VSGLPKTMTQQELESIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALN 337
Query: 750 QST 752
+T
Sbjct: 338 GTT 340
>gi|298490358|ref|YP_003720535.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298232276|gb|ADI63412.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 111
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NLSY VT+D LT++F +YG + V +P D+ET + +GFA V T A + L
Sbjct: 3 VYVGNLSYEVTQDALTQVFAEYGSVKRVQIPTDRETGRVRGFAFVEMSSDAEETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KPKE+
Sbjct: 63 DGAEWMGRDLKVNKAKPKED 82
>gi|269860405|ref|XP_002649924.1| RNA-binding protein, predicted [Enterocytozoon bieneusi H348]
gi|220066684|gb|EED44158.1| RNA-binding protein, predicted [Enterocytozoon bieneusi H348]
Length = 336
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 557 DNQQGVPEVEENVEED----EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
D+ + E+ V++D ++ + + T++IKNLN++ + +R F K G I + +
Sbjct: 70 DDNDCIDSEEQKVDDDSYTVDKNDDIENYTVFIKNLNYDLRDTDLRNEFSKLGKIIRLDL 129
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
+ + + GY F++F +++ + L++ H EL T
Sbjct: 130 SM-----NYKGLRNNGYAFIEFADKKAFDLCLQL--------HNTEL--------FGRTV 168
Query: 673 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
V K+ V+ + S + ++N+PF K+ +++E F FG++ + +P+ G ++GFGF
Sbjct: 169 VIEKAKPVSPKLYS-VFIKNLPFSIKKDDLKETFSKFGKIHNISIPEDKENEGRNKGFGF 227
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE 765
++F+ K A+ A KA + + R+ + E +
Sbjct: 228 IDFVDKKSAELASKA---NIFIQKRKCICELKD 257
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 40/195 (20%)
Query: 315 IKAKHWKSQEDS--VQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDK 372
I ++ K +DS V +DI E+ +F++NL+Y + + DL F K G + + L ++
Sbjct: 75 IDSEEQKVDDDSYTVDKNDDI-ENYTVFIKNLNYDLRDTDLRNEFSKLGKIIRLDLSMNY 133
Query: 373 ETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISE 432
+ + G+A + F + A L T GR + + KP V K++
Sbjct: 134 KGLRNNGYAFIEF-ADKKAFDLCLQLHNTELFGRTVVIEKAKP------VSPKLYS---- 182
Query: 433 RKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP--------YGI 484
+ +KNLP+ DLK F FG + + +P G
Sbjct: 183 -----------------VFIKNLPFSIKKDDLKETFSKFGKIHNISIPEDKENEGRNKGF 225
Query: 485 TGLVEFLQKNQAKAA 499
G ++F+ K A+ A
Sbjct: 226 -GFIDFVDKKSAELA 239
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETD-KTKGFALVTFLMPEHATQAYQH 397
+F++NL +++ +DDL + F K+G + + +P DKE + + KGF + F+ + A A +
Sbjct: 183 VFIKNLPFSIKKDDLKETFSKFGKIHNISIPEDKENEGRNKGFGFIDFVDKKSAELASK- 241
Query: 398 LDGTVFLGRMLHLIPGKPKENEGN 421
+F+ + + K +N+ N
Sbjct: 242 --ANIFIQKRKCICELKDSKNKFN 263
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NLDK---SIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKEF--------------- 190
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + KS
Sbjct: 191 --------------TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK----- 231
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 232 -GFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 145/392 (36%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
++LF FG V++ SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KDLFGKFGPALSVKVMTDE--SGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYVG 264
Query: 763 WAEE 766
A++
Sbjct: 265 RAQK 268
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTF------LGMAYIGFKDEKNCNKA 274
+++ + +KN + + LK F P SV+ G ++ F+ ++ KA
Sbjct: 188 KEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKA 247
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
+++ GK+LN Y G A E +K K + ++D + + +
Sbjct: 248 VDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRKFEQMKQDRITRYQGV- 294
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDKTKGFALVTFLMPEHAT 392
++V+NL + ++ L K F +G + A+V++ E ++KGF V F PE AT
Sbjct: 295 ---NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGRSKGFGFVCFSSPEEAT 347
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKE 417
+A ++G + + L++ + KE
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQRKE 372
>gi|195051457|ref|XP_001993098.1| GH13638 [Drosophila grimshawi]
gi|193900157|gb|EDV99023.1| GH13638 [Drosophila grimshawi]
Length = 726
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 108 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 162
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 163 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 208
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
QS++E LF FG++ R+ + +GL +G GF+ F + EA RA+K L +T
Sbjct: 209 NMTQSDLESLFSPFGKIITSRILCDNI-TGLSKGVGFIRFDQRFEADRAIKELNGTT 264
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 28/160 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 115 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 174
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 175 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 209
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGL---VEFLQKNQ 495
+DL++LF PFG + + ITGL V F++ +Q
Sbjct: 210 MTQSDLESLFSPFGKIITSRILCDNITGLSKGVGFIRFDQ 249
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
I SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 354 ITSSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 413
Query: 392 TQAYQHLDGTVFLGRMLH 409
A Q L+G R+L
Sbjct: 414 VLAIQSLNGYTLGNRVLQ 431
>gi|427731667|ref|YP_007077904.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427367586|gb|AFY50307.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 103
Score = 73.2 bits (178), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 52/86 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY+VT+DDLTK+F +YG + V LP D+ET + +GF V A Q L
Sbjct: 3 IYVGNLSYSVTQDDLTKVFAEYGAVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR++ + +P+E + G
Sbjct: 63 DGAEWMGRVMKVNKARPREEKSTRSG 88
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+I NL++N E+ +R F++ G +A V + +D S G+G+V+F +
Sbjct: 261 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRD-----SGRSRGFGYVEFTNAADAAK 315
Query: 643 ALKVLQNSSLDEHQIELKRSN-RNLESEATTVKRKSSNVAKQTGSK---ILVRNIPFQAK 698
A +++ LD ++ + +N R+ + + ++ N QT + + + NI F A
Sbjct: 316 AHAAKKDAELDGRKLNVDFANGRSNAAPKERAQSRAQNFGDQTSPESDTLFIGNIAFSAN 375
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
++ + E F G + VRLP SG +GFG+V+F + +EA+ A +AL L GR
Sbjct: 376 ENMISEAFAEHGSILGVRLPTDPE-SGRPKGFGYVQFSSVDEARSAFQAL-NGADLGGRS 433
Query: 759 LVLEWA 764
+ L+++
Sbjct: 434 MRLDFS 439
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 321 KSQEDSVQFAEDIA-ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKG 379
++Q + F + + ES +F+ N++++ E+ +++ F ++G + V LP D E+ + KG
Sbjct: 346 RAQSRAQNFGDQTSPESDTLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKG 405
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
F V F + A A+Q L+G GR + L P++N
Sbjct: 406 FGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQN 444
>gi|242041385|ref|XP_002468087.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
gi|241921941|gb|EER95085.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
Length = 654
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 167/432 (38%), Gaps = 89/432 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L V E+ L F K G + V + D T ++ + V + A A L
Sbjct: 44 LYVGDLHEDVAEEHLFDAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVMALDKL 103
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ ++ L D + S R DA V I VKNL
Sbjct: 104 NHSLVL------------------DKPIRVMWSNRDPDARRSGVGN-----IFVKNLNNS 140
Query: 459 TLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
L+ LF FGD+ +V G + G V+F + A A +L + F + L
Sbjct: 141 VDNASLQELFSKFGDVLSCKVAKNEDGTSRGYGFVQFASQESADEAIGNLNGSLFNDRKL 200
Query: 514 YLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDE 573
++ F + K E +A D++
Sbjct: 201 HV-----ATFIK-----------------------KSERSANNDDKF------------- 219
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
T LY+K+L+ + TE+ ++ F + GPI SV + R+ D S+G+GFV
Sbjct: 220 -------TNLYMKHLDDDITEELVKLKFSQFGPIVSVKIMRRPDGS------SLGFGFVS 266
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK----RKSSNVAKQTGSKIL 689
F ES +A + + L + + R+ + E + + +++ + K S +
Sbjct: 267 FQNPESAIKAQETMHGMLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIITKSNESNVY 326
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
++NI + + F +G + ++ + G+ RGFGFV + T EAK + ++
Sbjct: 327 IKNIHDEVDDDALRARFAEYGNITSAKVMRD--DKGISRGFGFVCYSTPEEAKSVVNSM- 383
Query: 750 QSTHLYGRRLVL 761
+ +G+ L +
Sbjct: 384 RGVMFFGKPLYV 395
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 123/309 (39%), Gaps = 71/309 (22%)
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT-KGFALVTFLMPEHATQAY 395
G IFV+NL+ +V L +LF K+G + + K D T +G+ V F E A +A
Sbjct: 130 GNIFVKNLNNSVDNASLQELFSKFGDVLSC--KVAKNEDGTSRGYGFVQFASQESADEAI 187
Query: 396 QHLDGTVFLGRMLHLIPG-KPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKN 454
+L+G++F R LH+ K E N D D F + +K+
Sbjct: 188 GNLNGSLFNDRKLHVATFIKKSERSANND------------DKFTN---------LYMKH 226
Query: 455 LPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFK 509
L +K F FG + +++ P G + G V F A A ++
Sbjct: 227 LDDDITEELVKLKFSQFGPIVSVKIMRRPDGSSLGFGFVSFQNPESAIKAQETMHGMLLG 286
Query: 510 EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
LY+ ++ ++KE+ ++ + EEK+ + N+ V
Sbjct: 287 SKALYV--------------ARAQKKEERKQYLQRLHEEKRNEIITKSNESNV------- 325
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
YIKN++ +D++R F + G I S V R D K +S G+
Sbjct: 326 --------------YIKNIHDEVDDDALRARFAEYGNITSAKVMR--DDKG----ISRGF 365
Query: 630 GFVQFYTRE 638
GFV + T E
Sbjct: 366 GFVCYSTPE 374
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 129/303 (42%), Gaps = 53/303 (17%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPL-PLASVRT------TFLGMAYIGFKDEKNCNKAL-NKN 278
I VKNL V L+ F + S + T G ++ F +++ ++A+ N N
Sbjct: 132 IFVKNLNNSVDNASLQELFSKFGDVLSCKVAKNEDGTSRGYGFVQFASQESADEAIGNLN 191
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
S + ++L++ + K + NN+ N+ KH +DI E
Sbjct: 192 GSLFNDRKLHVATFIKKSERS------ANNDDKFTNLYMKHLD---------DDITE--- 233
Query: 339 IFVRNLSYTVTEDDLTKL-FEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
+L KL F ++GP+ V + + + + GF V+F PE A +A +
Sbjct: 234 -------------ELVKLKFSQFGPIVSVKI-MRRPDGSSLGFGFVSFQNPESAIKAQET 279
Query: 398 LDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
+ G + + L++ + KE ++H E++ N+++ ++ + +KN+
Sbjct: 280 MHGMLLGSKALYVARAQKKEERKQYLQRLH---EEKR----NEIITKSNESNVYIKNIHD 332
Query: 458 RTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVP 512
L+A F +G++ +V+ GI+ G V + +AK+ NS+ F P
Sbjct: 333 EVDDDALRARFAEYGNITSAKVMRDDKGISRGFGFVCYSTPEEAKSVVNSMRGVMFFGKP 392
Query: 513 LYL 515
LY+
Sbjct: 393 LYV 395
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 77/402 (19%), Positives = 155/402 (38%), Gaps = 79/402 (19%)
Query: 29 ITQEQLKAKFEEKGTVTDVQL-KYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
+ +E L F + GTVT V++ + + R+ ++ Y A ALD N++ V
Sbjct: 53 VAEEHLFDAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVMALDKLNHSLVLDKP 112
Query: 88 IKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPTF 147
I+V WS PD+ + NI K S ++ +
Sbjct: 113 IRV-------------MWSNRDPDARR-SGVGNIFVKN------------LNNSVDNASL 146
Query: 148 SDFLQLHGKDVSKLLPLSNKDGEEK--------EEENEDESNNQIAHADISD--MEYLKL 197
+ G DV N+DG + +E+ DE+ + + +D +
Sbjct: 147 QELFSKFG-DVLSCKVAKNEDGTSRGYGFVQFASQESADEAIGNLNGSLFNDRKLHVATF 205
Query: 198 KTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRT- 255
KS+ +A +D ++ + +K+L + ++ +K F P+ SV+
Sbjct: 206 IKKSERSANND-------------DKFTNLYMKHLDDDITEELVKLKFSQFGPIVSVKIM 252
Query: 256 -----TFLGMAYIGFKDEKNCNKALNKNKSFWKG-KQLNIYKYSKDNSAKYSGAADDNNN 309
+ LG ++ F++ ++ KA G K L + + K K
Sbjct: 253 RRPDGSSLGFGFVSFQNPESAIKAQETMHGMLLGSKALYVARAQKKEERK---------- 302
Query: 310 ASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEV-IL 368
+ ++ H + + + + + + ++++N+ V +D L F +YG + ++
Sbjct: 303 ---QYLQRLHEEKRNEIITKSNE----SNVYIKNIHDEVDDDALRARFAEYGNITSAKVM 355
Query: 369 PIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
DK ++GF V + PE A + G +F G+ L++
Sbjct: 356 RDDKGI--SRGFGFVCYSTPEEAKSVVNSMRGVMFFGKPLYV 395
>gi|213409529|ref|XP_002175535.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003582|gb|EEB09242.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 621
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 174/446 (39%), Gaps = 92/446 (20%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
+ + S +++ L VTE L +LF GP+A + + D T ++ G+A V F E
Sbjct: 64 NTSTSASLYIGELDPMVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDG 123
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
+A L+ T+ GR ++ + S RK+ N +
Sbjct: 124 EKALDELNYTLIKGRPCRIMWSQRDP-------------SLRKMGTGN----------VF 160
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSL 503
+KNL D KAL + F G++L + G V F + A AA +
Sbjct: 161 IKNL---DPAIDNKALHDTFSAFGKILSCKVAVDELGNSKGYGFVHFDSVDSANAAIEHV 217
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
+ +Y+ + + D Q
Sbjct: 218 NGMLLNDKKVYV----------------------------------GHHISRRDRQSKFE 243
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
++ N T +Y+KNL+ ++TE+ + F+K G I S+++A+ + G+
Sbjct: 244 ALKANF-----------TNVYVKNLDLDTTEEEFTKLFEKYGKITSLSLAK----DNAGK 288
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSN 679
F G+ FV F T +S QA+ L + ++ + R+ + E + K+ K
Sbjct: 289 F--RGFAFVNFATHDSAQQAVDELNDFEYKGKKLYVGRAQKKHERQEELRKQYEQMKLEK 346
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
+ K G + V+N+ + ++ F AFG + ++ + +GFGFV +
Sbjct: 347 INKYQGVNLFVKNLQDEIDDERLKSEFSAFGTITSAKVMTDE--NNKSKGFGFVCYSNPE 404
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWAE 765
EA +A+ + Q L G+ L + A+
Sbjct: 405 EATKAIAEMNQRM-LAGKPLYVALAQ 429
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 252 SVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNI------------YKYSKDNSAK 299
S+R G +I D NKAL+ S + GK L+ Y + +S
Sbjct: 150 SLRKMGTGNVFIKNLDPAIDNKALHDTFSAF-GKILSCKVAVDELGNSKGYGFVHFDSVD 208
Query: 300 YSGAADDNNNASMENIK----AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTK 355
+ AA ++ N + N K H ++ +F A ++V+NL TE++ TK
Sbjct: 209 SANAAIEHVNGMLLNDKKVYVGHHISRRDRQSKFEALKANFTNVYVKNLDLDTTEEEFTK 268
Query: 356 LFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
LFEKYG + + L D K +GFA V F + A QA L+ + G+ L++
Sbjct: 269 LFEKYGKITSLSLAKDN-AGKFRGFAFVNFATHDSAQQAVDELNDFEYKGKKLYV 322
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 164/409 (40%), Gaps = 76/409 (18%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRR---FAFIGYHREDQAQAALDYFNNTYVFS 85
+T+ L F G V +++ + RR +A++ +H + + ALD N T
Sbjct: 80 VTEAMLFELFNSIGPVASIRV--CRDAVTRRSLGYAYVNFHNMEDGEKALDELNYTL--- 134
Query: 86 SRIKVEKCSNLGDTTKPKSWSKYAPD----SSAYQKLHNIAPKQDLKPEHTKDSKPGKKS 141
IK C + WS+ P + + N+ P D K H
Sbjct: 135 --IKGRPCRIM--------WSQRDPSLRKMGTGNVFIKNLDPAIDNKALHD--------- 175
Query: 142 KNDPTFSDFLQLHGKDVSKLLPLSNKDGEE-KEEENEDESNNQIAHAD---ISDME-YLK 196
TFS F ++ V+ + L N G ++ D +N I H + ++D + Y+
Sbjct: 176 ----TFSAFGKILSCKVA-VDELGNSKGYGFVHFDSVDSANAAIEHVNGMLLNDKKVYVG 230
Query: 197 LKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK------PLPL 250
+D SK K + + VKNL +++ F+ L L
Sbjct: 231 HHISRRDRQ---------SKFEALKANFTNVYVKNLDLDTTEEEFTKLFEKYGKITSLSL 281
Query: 251 ASVRTT-FLGMAYIGFKDEKNCNKALNKNKSF-WKGKQLNIYKYSKDNSAKYSGAADDNN 308
A F G A++ F + +A+++ F +KGK+L + + K + +
Sbjct: 282 AKDNAGKFRGFAFVNFATHDSAQQAVDELNDFEYKGKKLYVGRAQKKHERQ--------- 332
Query: 309 NASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVIL 368
E ++ ++ + + + + + + +FV+NL + ++ L F +G + +
Sbjct: 333 ----EELRKQYEQMKLEKINKYQGV----NLFVKNLQDEIDDERLKSEFSAFGTITSAKV 384
Query: 369 PIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
D E +K+KGF V + PE AT+A ++ + G+ L++ + KE
Sbjct: 385 MTD-ENNKSKGFGFVCYSNPEEATKAIAEMNQRMLAGKPLYVALAQRKE 432
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 14 HISLLDLDEVEFIYKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQA 73
++ LDLD T+E+ FE+ G +T + L GKFR FAF+ + D AQ
Sbjct: 253 YVKNLDLD-------TTEEEFTKLFEKYGKITSLSLAKDNAGKFRGFAFVNFATHDSAQQ 305
Query: 74 ALDYFNN 80
A+D N+
Sbjct: 306 AVDELND 312
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKEF--------------- 190
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 191 --------------TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 145/392 (36%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
++LF FG V++ SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KDLFGKFGPALSVKVMTDE--SGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYVG 264
Query: 763 WAEE 766
A++
Sbjct: 265 RAQK 268
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTF------LGMAYIGFKDEKNCNKA 274
+++ + +KN + + LK F P SV+ G ++ F+ ++ KA
Sbjct: 188 KEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKA 247
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
+++ GK+LN Y G A E +K K + ++D + + +
Sbjct: 248 VDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRKFEQMKQDRITRYQGV- 294
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDKTKGFALVTFLMPEHAT 392
++V+NL + ++ L K F +G + A+V++ E ++KGF V F PE AT
Sbjct: 295 ---NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGRSKGFGFVCFSSPEEAT 347
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKE 417
+A ++G + + L++ + KE
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQRKE 372
>gi|41053419|ref|NP_956615.1| RNA-binding protein 28 [Danio rerio]
gi|30353878|gb|AAH51781.1| Zgc:56258 [Danio rerio]
Length = 864
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 543 EEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK 602
+ G+ E+ + + E N + +P + E ++ L I+NL+F +D +++ F
Sbjct: 95 DSGDTEESQKSGETKNTEKIPSPTKKKE---------NSWLIIRNLSFKCEDDELKQIFS 145
Query: 603 KCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS 662
K G + + K D K G+ FVQF +A + ++ + +E+ +
Sbjct: 146 KFGTVLETRIPLKPDGKKK------GFAFVQFKCVSEAEKARAAMNRKAIRDRPVEVDWT 199
Query: 663 NRNLES------------EATTVKRKSSNVAK-QTGSKILVRNIPFQAKQSEVEELFKAF 709
N ES E TT K + K + S++++RN+ F+ ++ +++++F F
Sbjct: 200 TSNTESADPEDTEEPHKAEETTSTEKFKGIRKIKLKSRLIIRNLSFKCEEDDLKQIFSEF 259
Query: 710 GELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
G + ++P K G RGF FV F EA +A+ A+ + R++ ++WA D
Sbjct: 260 GTVLEAKIPLK--PDGKKRGFAFVLFKRMPEAGKALTAM-NGKKIKDRQVAVDWAIAKD 315
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 18/196 (9%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E+ + +RNLS+ +D+L ++F K+G + E +P+ K K KGFA V F A +A
Sbjct: 122 ENSWLIIRNLSFKCEDDELKQIFSKFGTVLETRIPL-KPDGKKKGFAFVQFKCVSEAEKA 180
Query: 395 YQHLDGTVFLGRMLHLI-------PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSK 447
++ R + + P++ E + H + F + + + K
Sbjct: 181 RAAMNRKAIRDRPVEVDWTTSNTESADPEDTE-----EPHKAEETTSTEKFKGIRKIKLK 235
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP--PYGIT---GLVEFLQKNQAKAAFNS 502
++++NL ++ DLK +F FG + +P P G V F + +A A +
Sbjct: 236 SRLIIRNLSFKCEEDDLKQIFSEFGTVLEAKIPLKPDGKKRGFAFVLFKRMPEAGKALTA 295
Query: 503 LAYTKFKEVPLYLEWA 518
+ K K+ + ++WA
Sbjct: 296 MNGKKIKDRQVAVDWA 311
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 98/208 (47%), Gaps = 34/208 (16%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P TL+++ L ++ + + F + GP+ + V K+ K G+G+V F +
Sbjct: 2 PAVTLFVRRLPETASNEHLAEIFSEIGPLKNCFVVCDKEKKC------RGFGYVTFSMED 55
Query: 639 SLNQALKVLQ-----------------------NSSLDEHQIELKRSNRNLESEATTVKR 675
+ALK ++ N+ ++ + + S ++ E++ T ++
Sbjct: 56 DAQRALKEVKLYDDQKIFVTVAKKKLDDRKRKKNAKTNKDSGDTEESQKSGETKNT--EK 113
Query: 676 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
S K+ S +++RN+ F+ + E++++F FG + R+P K G +GF FV+F
Sbjct: 114 IPSPTKKKENSWLIIRNLSFKCEDDELKQIFSKFGTVLETRIPLK--PDGKKKGFAFVQF 171
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEW 763
+EA++A A+ + + R + ++W
Sbjct: 172 KCVSEAEKARAAMNRKA-IRDRPVEVDW 198
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 217 APVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKD 267
+P K++ ++++NL + +LK F +V T + G A++ FK
Sbjct: 116 SPTKKKENSWLIIRNLSFKCEDDELKQIFSKF--GTVLETRIPLKPDGKKKGFAFVQFK- 172
Query: 268 EKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSV 327
C K ++ K + +D + + +A E+ + H + S
Sbjct: 173 ---CVSEAEKARAAMNRKAI------RDRPVEVDWTTSNTESADPEDTEEPHKAEETTST 223
Query: 328 QFAEDIAE---SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVT 384
+ + I + R+ +RNLS+ EDDL ++F ++G + E +P+ K K +GFA V
Sbjct: 224 EKFKGIRKIKLKSRLIIRNLSFKCEEDDLKQIFSEFGTVLEAKIPL-KPDGKKRGFAFVL 282
Query: 385 F-LMPEHATQAYQHLDGTVFLGRMLHL 410
F MPE A +A ++G R + +
Sbjct: 283 FKRMPE-AGKALTAMNGKKIKDRQVAV 308
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 176/466 (37%), Gaps = 113/466 (24%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V +L VT+ L LF + + + + D T ++ G+ V + E A +A
Sbjct: 168 SASLYVGDLDLNVTDSQLHDLFSQLAQVVSIRVCRDSTTHRSLGYGYVNYTDLEDAARAL 227
Query: 396 QHLDGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
L+ T G+ + ++ P K GN I
Sbjct: 228 DVLNFTPLNGKPIRIMYSHRDPSIRKSGTGN----------------------------I 259
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVL-----VPPYGIT---GLVEFLQKNQAKAAFNS 502
+KNL D KAL + F G +L G++ G V+F + A+ A +
Sbjct: 260 FIKNLDKGI---DHKALHDTFSAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDK 316
Query: 503 LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
L + +++ G F +E+ KEK
Sbjct: 317 LNGMLLNDKQVFV-----GPFVRKQERESTINKEKF------------------------ 347
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPG 622
+++KN++ TE+ + R F + GPI SV V R D KS
Sbjct: 348 ------------------NNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSK- 388
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSS 678
+GFV F + +++ L D+ + + K+S R +E ++ +
Sbjct: 389 -----CFGFVNFENVDDAAMSVEALNGQKFDDKEWYVGKAQKKSEREIELKSRFEQNMKE 443
Query: 679 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEF 735
V K G+ + ++N+ +++ELF FG + K +R P +GL RG GFV F
Sbjct: 444 AVDKFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDP-----NGLSRGSGFVAF 498
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+ EA RA+ + S + + L + A+ ED R R F
Sbjct: 499 SSPEEASRALAEM-NSKMVVSKPLYVALAQRK---EDRRARLQAQF 540
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTFLGMA---YIGFKDEKNCNKA 274
++K +++ + VKN+ G+ ++DL F P+ SV G GF + +N + A
Sbjct: 342 INKEKFNNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVDDA 401
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
++ LN K+ D+ Y G A + +E +K++ ++ +++V D
Sbjct: 402 AMSVEA------LNGQKF--DDKEWYVGKAQKKSEREIE-LKSRFEQNMKEAV----DKF 448
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
+ ++++NL ++ +D L +LF ++G + + D ++G V F PE A++A
Sbjct: 449 QGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDP-NGLSRGSGFVAFSSPEEASRA 507
Query: 395 YQHLDGTVFLGRMLHLIPGKPKEN 418
++ + + + L++ + KE+
Sbjct: 508 LAEMNSKMVVSKPLYVALAQRKED 531
>gi|428779944|ref|YP_007171730.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
gi|428694223|gb|AFZ50373.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
Length = 95
Score = 73.2 bits (178), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL Y+VT+DDL+++F +YG + V LP D+ET + +GF V + A L
Sbjct: 3 IYVGNLDYSVTQDDLSEVFAEYGTVKRVHLPTDRETGRMRGFGFVEMASETEESNAISEL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR L + P +P+EN+ + G
Sbjct: 63 DGAEWMGRELKVNPARPRENKSSFGG 88
Score = 41.6 bits (96), Expect = 1.5, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ + Q ++ E+F +G +K V LP +G RGFGFVE ++ E A+
Sbjct: 3 IYVGNLDYSVTQDDLSEVFAEYGTVKRVHLPTDR-ETGRMRGFGFVEMASETEESNAISE 61
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDI-RKRTNRYF 781
L GR L + A +N R NR F
Sbjct: 62 L-DGAEWMGRELKVNPARPRENKSSFGGGRRNRRF 95
>gi|317139650|ref|XP_003189187.1| C6 transcription factor [Aspergillus oryzae RIB40]
Length = 1086
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 575 REPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQF 634
+EP+P T+++ NL ++ T D +R+ +K G + SV + + +S G+G+VQF
Sbjct: 900 KEPDPKETVFVGNLFYDVTADDLRKQMEKYGVVESVYITFDN------RGMSKGFGYVQF 953
Query: 635 YTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIP 694
+ +S +A+ + + ++ + + N++ + + + N+P
Sbjct: 954 DSIDSARRAIDAMHMRVYEGRRVIVAFAQNNIDQHRNL---------RPISRTLYLGNLP 1004
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
F+ ++ ELF+ + VR+ +G+ RGF EFI A+ A + L +
Sbjct: 1005 FEMTDRDINELFRDIVNVIDVRVSVDR-RTGMFRGFAHAEFINVESARAAFEILSRKAP- 1062
Query: 755 YGRRLVLEWAE---EADNVED 772
YGR+L L++++ AD +ED
Sbjct: 1063 YGRKLRLDYSQTNRRADRLED 1083
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 70/172 (40%), Gaps = 27/172 (15%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV NL Y VT DDL K EKYG + V + D +KGF V F + A +A +
Sbjct: 908 VFVGNLFYDVTADDLRKQMEKYGVVESVYITFDNR-GMSKGFGYVQFDSIDSARRAIDAM 966
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
V+ GR +V ++ +D + R + + NLP+
Sbjct: 967 HMRVYEGR------------------RVIVAFAQNNIDQHRNLRPI--SRTLYLGNLPFE 1006
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAFNSLA 504
D+ LF ++ V V TG+ EF+ A+AAF L+
Sbjct: 1007 MTDRDINELFRDIVNVIDVRVSVDRRTGMFRGFAHAEFINVESARAAFEILS 1058
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 306 DNNNASMENIKAKHWKSQEDS---VQFAEDIAESGR--------IFVRNLSYTVTEDDLT 354
D+ +++ I A H + E V FA++ + R +++ NL + +T+ D+
Sbjct: 954 DSIDSARRAIDAMHMRVYEGRRVIVAFAQNNIDQHRNLRPISRTLYLGNLPFEMTDRDIN 1013
Query: 355 KLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+LF + +V + +D+ T +GFA F+ E A A++ L GR L L
Sbjct: 1014 ELFRDIVNVIDVRVSVDRRTGMFRGFAHAEFINVESARAAFEILSRKAPYGRKLRL 1069
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 15/191 (7%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
L+ NL++N E+ +R F++ G + + ++ S G+G+V+F E
Sbjct: 238 ANLFAGNLSWNVDEEWLRSEFEEFGELVGTRIVTDRE-----SGRSRGFGYVEFANVEDA 292
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSK-------ILVRNI 693
+A ++ LD ++ L +N A +R + N AK G + + + NI
Sbjct: 293 VKAHAAKKDVELDGRKLNLDFANARANGNANPRER-ADNRAKSFGDQTSPESDTLFIGNI 351
Query: 694 PFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTH 753
F A +S V+ELF +G ++ +RLP SG +GFG+V+F + +EA+ AM+A
Sbjct: 352 SFSADESMVQELFSKYGSIQGIRLPTDPE-SGRPKGFGYVQFSSVDEARAAMEA-EHGAD 409
Query: 754 LYGRRLVLEWA 764
L GR + L+++
Sbjct: 410 LGGRSIRLDYS 420
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +F+ N+S++ E + +LF KYG + + LP D E+ + KGF V F + A A
Sbjct: 342 ESDTLFIGNISFSADESMVQELFSKYGSIQGIRLPTDPESGRPKGFGYVQFSSVDEARAA 401
Query: 395 YQHLDGTVFLGRMLHLIPGKPKE 417
+ G GR + L PK+
Sbjct: 402 MEAEHGADLGGRSIRLDYSTPKQ 424
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 163/427 (38%), Gaps = 109/427 (25%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VT+ L LF + G + V + D T ++ G+ V + P+ A +A L
Sbjct: 36 LYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDVL 95
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ T R + ++ P K +GN I +K
Sbjct: 96 NFTPLNNRPIRIMYSHRDPSIRKSGQGN----------------------------IFIK 127
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGITG--------LVEFLQKNQAKAAFNSLAY 505
NL D KAL + F G +L + G V+F + A+ A L
Sbjct: 128 NL---DKAIDHKALHDTFSSFGNILSCKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKL-- 182
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEV 565
G+ K+ G K E E G+ K N
Sbjct: 183 --------------NGMLLNDKQVYVGPFLRKQERE-STGDRAKFNN------------- 214
Query: 566 EENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFL 625
+++KNL+ ++T+D +++ F + G I S V R D K
Sbjct: 215 -----------------VFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDGK------ 251
Query: 626 SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVA 681
S +GFV F + + +A++ L +D+ + + K+S R E + +
Sbjct: 252 SKCFGFVNFESTDDAARAVEALNGKKIDDKEWYVGKAQKKSEREHELKIKFEQSMKEAAD 311
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITK 738
K G+ + V+N+ +++ELF ++G + K +R P +G+ RG GFV F T
Sbjct: 312 KYQGANLYVKNLDDSIADEKLKELFSSYGTITSCKVMRDP-----NGVSRGSGFVAFSTP 366
Query: 739 NEAKRAM 745
EA RA+
Sbjct: 367 EEASRAL 373
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+ N T+ + F + G + SV V R + S+GYG+V + +
Sbjct: 34 TSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRR-----SLGYGYVNYSNPQDA 88
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL VL + L+ I + S+R+ ++ K I ++N+
Sbjct: 89 ARALDVLNFTPLNNRPIRIMYSHRD------------PSIRKSGQGNIFIKNLDKAIDHK 136
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F +FG + ++ + GSG +G+GFV+F T+ A++A++ L
Sbjct: 137 ALHDTFSSFGNILSCKV--AVDGSGQSKGYGFVQFDTEEAAQKAIEKL 182
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ ++ F G I S VA G S GYGFVQF T E+ +
Sbjct: 124 IFIKNLDKAIDHKALHDTFSSFGNILSCKVAVD------GSGQSKGYGFVQFDTEEAAQK 177
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ L L++ Q+ + R E E+T + K +NV V+N+ E+
Sbjct: 178 AIEKLNGMLLNDKQVYVGPFLRKQERESTGDRAKFNNV--------FVKNLSESTTDDEL 229
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
++ F FG + + + G G + FGFV F + ++A RA++AL
Sbjct: 230 KKTFGEFGTITSAVVMRD--GDGKSKCFGFVNFESTDDAARAVEAL 273
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 120/313 (38%), Gaps = 66/313 (21%)
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G IF++NL + L F +G + + +D + ++KG+ V F E A +A +
Sbjct: 122 GNIFIKNLDKAIDHKALHDTFSSFGNILSCKVAVDG-SGQSKGYGFVQFDTEEAAQKAIE 180
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
L+G + + +++ P K+ + + FN V VKNL
Sbjct: 181 KLNGMLLNDKQVYVGPFLRKQERESTGDRAK----------FNNV---------FVKNLS 221
Query: 457 YRTLPTDLKALFEPFGDLGRVLVPPYG-----ITGLVEFLQKNQAKAAFNSLAYTKFKEV 511
T +LK F FG + +V G G V F + A A +L K +
Sbjct: 222 ESTTDDELKKTFGEFGTITSAVVMRDGDGKSKCFGFVNFESTDDAARAVEALNGKKIDD- 280
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
KE GK ++K+E E E + ++ D QG
Sbjct: 281 ---------------KEWYVGKAQKKSEREHELKIKFEQSMKEAADKYQG---------- 315
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
LY+KNL+ + ++ ++ F G I S V R DP +S G GF
Sbjct: 316 ---------ANLYVKNLDDSIADEKLKELFSSYGTITSCKVMR--DPNG----VSRGSGF 360
Query: 632 VQFYTRESLNQAL 644
V F T E ++AL
Sbjct: 361 VAFSTPEEASRAL 373
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D A+ +FV+NLS + T+D+L K F ++G + ++ D + K+K F V F + A
Sbjct: 208 DRAKFNNVFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGD-GKSKCFGFVNFESTDDA 266
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA---FNQVVEARSKR 448
+A + L+G + ++ GK ++ SER+ + F Q ++ + +
Sbjct: 267 ARAVEALNGKKIDDKEWYV--GKAQKK------------SEREHELKIKFEQSMKEAADK 312
Query: 449 I----ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAA 499
+ VKNL LK LF +G + +V+ P G+ +G V F +A A
Sbjct: 313 YQGANLYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPNGVSRGSGFVAFSTPEEASRA 372
Query: 500 FNSLAYTKFKEVPLYLEWA 518
+ PLY+ A
Sbjct: 373 LLEMNGKMVASKPLYVTLA 391
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
E S++ A D + ++V+NL ++ ++ L +LF YG + + D ++G V
Sbjct: 303 EQSMKEAADKYQGANLYVKNLDDSIADEKLKELFSSYGTITSCKVMRDP-NGVSRGSGFV 361
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
F PE A++A ++G + + L++ + KE+
Sbjct: 362 AFSTPEEASRALLEMNGKMVASKPLYVTLAQRKED 396
>gi|452987674|gb|EME87429.1| hypothetical protein MYCFIDRAFT_201120 [Pseudocercospora fijiensis
CIRAD86]
Length = 739
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 156/365 (42%), Gaps = 48/365 (13%)
Query: 312 MENIKAKHWKSQEDSVQFAEDIAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPI 370
M ++ + K Q+D+ D + GR +FVR+L + T + LT LF P+ I
Sbjct: 11 MTSLTPRKDKEQKDA-----DATQQGRSLFVRSLPVSTTSESLTGLFSDAYPVKHATAVI 65
Query: 371 DKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCI 430
D T + +G+ VTF E A +A + +G V G+ L + + + G +G+ +
Sbjct: 66 DPATKECRGYGFVTFADAEDAAKAKKQFNGHVLDGKKLRVEVAEKRHRNGE-NGE---SV 121
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTD-LKALFEPFGDLGRVLVPPYGIT---- 485
++K + Q + ++V+NLP+ ++ L LF+ +G + + VP G
Sbjct: 122 PQKKKEQERQPSQPSK---LIVRNLPWSIKGSEQLTRLFQSYGKVKQAYVPKKGPGLMAG 178
Query: 486 -GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSK---------GKEK 535
G V + A+ A + + L ++W+ E E++ + + G E
Sbjct: 179 FGFVVMRGRKNAEKAIEGVNGKEVDGRTLAVDWSVEKDVYESQPQDQEENGESVQVGAEI 238
Query: 536 EKNEEEGEEGE----------EEKKENTAEEDNQQGVPEVEENVEEDEE-----REPEPD 580
E++ E E+G E ++ + +E N+ ++ E R +
Sbjct: 239 EEDLMEDEQGRGSDSTSDVSGTESDDDEEGGVDDDDDESIEVNLGDESEQQVQDRSEDRS 298
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
TL+I+NL F T++ + HF++ G V G S G GFV FY +E
Sbjct: 299 KTLFIRNLPFTCTDEDLEDHFQQFGSTRYARVV-----MDYGTERSKGTGFVCFYNKEDA 353
Query: 641 NQALK 645
+ L+
Sbjct: 354 DACLR 358
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 13/192 (6%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+L++++L ++T +S+ F P+ T P GYGFV F E
Sbjct: 33 SLFVRSLPVSTTSESLTGLFSDAYPVKHATAV-----IDPATKECRGYGFVTFADAEDAA 87
Query: 642 QALKVLQNSSLDEHQIELK---RSNRNLES-EATTVKRKSSNVAKQTGSKILVRNIPFQA 697
+A K LD ++ ++ + +RN E+ E+ K+K SK++VRN+P+
Sbjct: 88 KAKKQFNGHVLDGKKLRVEVAEKRHRNGENGESVPQKKKEQERQPSQPSKLIVRNLPWSI 147
Query: 698 KQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
K SE + LF+++G++K +PKK G GL GFGFV + A++A++ + + G
Sbjct: 148 KGSEQLTRLFQSYGKVKQAYVPKK--GPGLMAGFGFVVMRGRKNAEKAIEGV-NGKEVDG 204
Query: 757 RRLVLEWAEEAD 768
R L ++W+ E D
Sbjct: 205 RTLAVDWSVEKD 216
>gi|345567796|gb|EGX50724.1| hypothetical protein AOL_s00075g150 [Arthrobotrys oligospora ATCC
24927]
Length = 1471
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 29/173 (16%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG------FVQ 633
+TT+Y+ N + E+ IR FK+CGPI V +F S+ Y +VQ
Sbjct: 1084 NTTVYVTNFPPTADENWIRELFKECGPILEV------------RFPSLKYNNHRRFCYVQ 1131
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNI 693
F E +A + + ++ ++ K S+ N++ E + A G ++ VRNI
Sbjct: 1132 FDASEDAEKATE-MNGKDVEGFKLVSKLSDPNVKQERSG--------AVYEGREVFVRNI 1182
Query: 694 PFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+ A + ++ ELF +G +K +RL K G G+H G+GF++F T A +++
Sbjct: 1183 DYAATEDDIRELFSKYGTVKSIRLISK--GRGVHSGYGFLDFETTESANASLE 1233
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++++N+++ +TED IR F K G + S+ + K G+ + GYGF+ F T ES N
Sbjct: 1177 VFVRNIDYAATEDDIRELFSKYGTVKSIRLISK------GRGVHSGYGFLDFETTESANA 1230
Query: 643 ALKV 646
+L++
Sbjct: 1231 SLEL 1234
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 21/190 (11%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ E +FVRN+ Y TEDD+ +LF KYG + + L I K G+ + F E A
Sbjct: 1171 VYEGREVFVRNIDYAATEDDIRELFSKYGTVKSIRL-ISKGRGVHSGYGFLDFETTESAN 1229
Query: 393 QAYQHLDGTVFLGRMLHLIPGKP-------KENEGNVDGKVHCCISERKLDAFNQV---- 441
+ + L F R L ++ +P K++ G K + A + +
Sbjct: 1230 ASLE-LHEQKFKSRKLLVVISEPQGGAPANKKSSGKTQAKFPNGAAGSPEVAGSPMSTTA 1288
Query: 442 --------VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQK 493
+A ++ + V N+ + ++A+FE +G L +V + +VEF +
Sbjct: 1289 SELPEAPDTDAIRQKTLYVLNIADTVNDSKIRAVFEKYGSLHKVQMQLNHQAAIVEFDEV 1348
Query: 494 NQAKAAFNSL 503
A A +L
Sbjct: 1349 KDAGKAMLAL 1358
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 117/280 (41%), Gaps = 38/280 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V N T E+ + +LF++ GP+ EV P K + + F V F E A +A + +
Sbjct: 1087 VYVTNFPPTADENWIRELFKECGPILEVRFPSLKYNNHRR-FCYVQFDASEDAEKATE-M 1144
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G G L K ++ NV K + V E R + V+N+ Y
Sbjct: 1145 NGKDVEGFKL-----VSKLSDPNV-----------KQERSGAVYEGRE---VFVRNIDYA 1185
Query: 459 TLPTDLKALFEPFGDLG--RVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
D++ LF +G + R++ G+ G ++F A A+ L KFK L
Sbjct: 1186 ATEDDIRELFSKYGTVKSIRLISKGRGVHSGYGFLDFETTESANASLE-LHEQKFKSRKL 1244
Query: 514 YLEWA-PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEED 572
+ + P+G A A +KS GK + K G G E A E+ E + D
Sbjct: 1245 LVVISEPQG-GAPANKKSSGKTQAKF-PNGAAGSPE----VAGSPMSTTASELPEAPDTD 1298
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
R+ TLY+ N+ + IR F+K G + V +
Sbjct: 1299 AIRQ----KTLYVLNIADTVNDSKIRAVFEKYGSLHKVQM 1334
>gi|344231201|gb|EGV63083.1| hypothetical protein CANTEDRAFT_106956 [Candida tenuis ATCC 10573]
Length = 231
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++ L++N +D ++R F+ G + S V ++ + G+ S GYG+V F ++
Sbjct: 4 TLFVGRLSWNIDDDWLKREFEPSGGVISARVIMER---ATGK--SRGYGYVDFESKADAE 58
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVK-RKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL+ Q +D I L S ++ A + +K +V + + N+ F A +
Sbjct: 59 KALQDFQGKEIDGRPINLDLSTSKPQTPAKNDRAKKFGDVVSAPSDTLFIGNLSFNATRD 118
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
++ E F +GE+ R+P + +GFG+V++ + EAK A++AL ++ GR
Sbjct: 119 KLFEAFGQYGEVISCRIPTH-PDTQQPKGFGYVQYGSIEEAKAALEAL-NGEYIEGRPCR 176
Query: 761 LEWAEEADNVEDIRKR 776
L+++ D + R
Sbjct: 177 LDYSTPRDPASSQKPR 192
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 32/198 (16%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E +FV LS+ + +D L + FE G + + +++ T K++G+ V F A +A
Sbjct: 1 EPATLFVGRLSWNIDDDWLKREFEPSGGVISARVIMERATGKSRGYGYVDFESKADAEKA 60
Query: 395 YQHLDGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI 449
Q G GR ++L P P +N+ + F VV A S
Sbjct: 61 LQDFQGKEIDGRPINLDLSTSKPQTPAKND--------------RAKKFGDVVSAPSD-T 105
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVL---VPPYGIT------GLVEFLQKNQAKAAF 500
+ + NL + LFE FG G V+ +P + T G V++ +AKAA
Sbjct: 106 LFIGNLSFNAT---RDKLFEAFGQYGEVISCRIPTHPDTQQPKGFGYVQYGSIEEAKAAL 162
Query: 501 NSLAYTKFKEVPLYLEWA 518
+L + P L+++
Sbjct: 163 EALNGEYIEGRPCRLDYS 180
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 19/159 (11%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G Y+ F+ + + KAL ++GK+++ + D S +N +AK
Sbjct: 45 GYGYVDFESKADAEKALQD----FQGKEIDGRPINLDLSTS-------KPQTPAKNDRAK 93
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK 378
+ D V A S +F+ NLS+ T D L + F +YG + +P +T + K
Sbjct: 94 KFG---DVVS-----APSDTLFIGNLSFNATRDKLFEAFGQYGEVISCRIPTHPDTQQPK 145
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
GF V + E A A + L+G GR L P++
Sbjct: 146 GFGYVQYGSIEEAKAALEALNGEYIEGRPCRLDYSTPRD 184
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P TL+I NL+FN+T D + F + G + S + D + P G+G+VQ+ + E
Sbjct: 102 PSDTLFIGNLSFNATRDKLFEAFGQYGEVISCRIPTHPDTQQP-----KGFGYVQYGSIE 156
Query: 639 SLNQALKVLQNSSLDEHQIELKRS 662
AL+ L ++ L S
Sbjct: 157 EAKAALEALNGEYIEGRPCRLDYS 180
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+I NL++N E+ +R F++ G +A V + +D S G+G+V+F +
Sbjct: 231 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSG-----RSRGFGYVEFTNAADAAK 285
Query: 643 ALKVLQNSSLDEHQIELKRSN-RNLESEATTVKRKSSNVAKQTGSK---ILVRNIPFQAK 698
A +++ LD ++ + +N R+ + + ++ N QT + + + NI F A
Sbjct: 286 AHAAKKDAELDGRKLNVDFANGRSNAAPKERAQSRAQNFGDQTSPESDTLFIGNIAFSAN 345
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
++ + E F G + VRLP SG +GFG+V+F + +EA+ A +AL L GR
Sbjct: 346 ENMISEAFAEHGSILGVRLPTDPE-SGRPKGFGYVQFSSVDEARSAFQAL-NGADLGGRS 403
Query: 759 LVLEWA 764
+ L+++
Sbjct: 404 MRLDFS 409
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 321 KSQEDSVQFAEDIA-ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKG 379
++Q + F + + ES +F+ N++++ E+ +++ F ++G + V LP D E+ + KG
Sbjct: 316 RAQSRAQNFGDQTSPESDTLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKG 375
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
F V F + A A+Q L+G GR + L P++N
Sbjct: 376 FGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQN 414
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+I NL++N E+ +R F++ G +A V + +D S G+G+V+F +
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRD-----SGRSRGFGYVEFTNAADAAK 287
Query: 643 ALKVLQNSSLDEHQIELKRSN-RNLESEATTVKRKSSNVAKQTGSK---ILVRNIPFQAK 698
A +++ LD ++ + +N R+ + + ++ N QT + + + NI F A
Sbjct: 288 AHAAKKDAELDGRKLNVDFANGRSNAAPKERAQSRAQNFGDQTSPESDTLFIGNIAFSAN 347
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
++ + E F G + VRLP SG +GFG+V+F + +EA+ A +AL L GR
Sbjct: 348 ENMISEAFAEHGSILGVRLPTDPE-SGRPKGFGYVQFSSVDEARSAFQAL-NGADLGGRS 405
Query: 759 LVLEWAEEADN 769
+ L+++ N
Sbjct: 406 MRLDFSSPRQN 416
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 321 KSQEDSVQFAEDIA-ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKG 379
++Q + F + + ES +F+ N++++ E+ +++ F ++G + V LP D E+ + KG
Sbjct: 318 RAQSRAQNFGDQTSPESDTLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKG 377
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
F V F + A A+Q L+G GR + L P++N
Sbjct: 378 FGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQN 416
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 176/457 (38%), Gaps = 101/457 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VT+ L LF + G + V + D + ++ G+ V F P+ A +A L
Sbjct: 33 LYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARALDVL 92
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ T R + ++ P K +GN I +K
Sbjct: 93 NFTPLNNRPIRIMYSHRDPSIRKSGQGN----------------------------IFIK 124
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
NL R + D KAL + F G +L K A +S
Sbjct: 125 NLD-RAI--DHKALHDTFSTFGNIL----------------SCKVATDS----------- 154
Query: 514 YLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDE 573
+ K G + NEE ++ E K D Q V E +
Sbjct: 155 -----------SGQSKGYGFVQFDNEESAQKAIE-KLNGMLLNDKQVYVGPFLRKQERES 202
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
+ +++KNL+ ++T+D ++ F + G I S V R D K S +GFV
Sbjct: 203 AADKAKFNNVFVKNLSESTTDDELKNTFGEFGTITSAVVMRDGDGK------SKCFGFVN 256
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA----KQTGSKIL 689
F + +A++ L + D+ + + ++ + E E +R ++ K G+ +
Sbjct: 257 FENADDAARAVEALNGKNFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLY 316
Query: 690 VRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
V+N+ +++ELF FG + K +R P +GL RG GFV F T EA RA+
Sbjct: 317 VKNLDDSIGDEKLKELFSPFGTITSCKVMRDP-----NGLSRGSGFVAFSTPEEASRAL- 370
Query: 747 ALCQSTHLYGRRLVLE--WAEEADNVEDIRKRTNRYF 781
+ G+ +V + + A ED R R F
Sbjct: 371 -----LEMNGKMVVSKPLYVTLAQRKEDRRARLQAQF 402
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+ N T+ + F + G + SV V R + S+GYG+V F +
Sbjct: 31 TSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRR-----SLGYGYVNFSNPQDA 85
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL VL + L+ I + S+R+ ++ K I ++N+
Sbjct: 86 ARALDVLNFTPLNNRPIRIMYSHRD------------PSIRKSGQGNIFIKNLDRAIDHK 133
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F FG + ++ SG +G+GFV+F + A++A++ L
Sbjct: 134 ALHDTFSTFGNILSCKVATD--SSGQSKGYGFVQFDNEESAQKAIEKL 179
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 23/199 (11%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
A D A+ +FV+NLS + T+D+L F ++G + ++ D + K+K F V F +
Sbjct: 203 AADKAKFNNVFVKNLSESTTDDELKNTFGEFGTITSAVVMRDGD-GKSKCFGFVNFENAD 261
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKP-----KENEGNVDGKVHCCISERKLDAFNQVVEA 444
A +A + L+G F + ++ GK +ENE + +R + + +
Sbjct: 262 DAARAVEALNGKNFDDKEWYV--GKAQKKSERENE----------LKQRFEQSMKEAADK 309
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAA 499
+ VKNL LK LF PFG + +V+ P G+ +G V F +A A
Sbjct: 310 YQGANLYVKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGLSRGSGFVAFSTPEEASRA 369
Query: 500 FNSLAYTKFKEVPLYLEWA 518
+ PLY+ A
Sbjct: 370 LLEMNGKMVVSKPLYVTLA 388
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
E S++ A D + ++V+NL ++ ++ L +LF +G + + D ++G V
Sbjct: 300 EQSMKEAADKYQGANLYVKNLDDSIGDEKLKELFSPFGTITSCKVMRDP-NGLSRGSGFV 358
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
F PE A++A ++G + + + L++ + KE+
Sbjct: 359 AFSTPEEASRALLEMNGKMVVSKPLYVTLAQRKED 393
>gi|282896900|ref|ZP_06304906.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198309|gb|EFA73199.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 92
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I++ NLSY TE DL +F YG + V+LP D+ET K +GFA V + A L
Sbjct: 3 IYIGNLSYRATEADLKSVFADYGEVKRVVLPTDRETGKMRGFAFVEMIEDAQEDAAISEL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG ++GR L + KPKE
Sbjct: 63 DGAEWMGRQLRVNKAKPKE 81
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 160/417 (38%), Gaps = 83/417 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VT+ L LF + G + V + D + ++ G+ V + P+ A +A + L
Sbjct: 29 LYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEVL 88
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T LH GKP + S R + + I +KNL
Sbjct: 89 NFTP-----LH---GKP----------IRIMYSNR-----DPTIRRSGNGNIFIKNL--- 122
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
D KAL + F G +L K A +S +K Y
Sbjct: 123 DKAIDHKALHDTFSAFGNIL----------------SCKVAVDSSGQSKGYGFVQY---- 162
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
+ +E + EK D Q V E D +
Sbjct: 163 -------------------DSDEAAQKAIEKLNGMLLNDKQVYVGPFVRKQERDMAVDKT 203
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +++KNL+ ++ E+ +R+ F + G I SV V + +D K S +GFV F E
Sbjct: 204 RFTNVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDGK------SRCFGFVNFENAE 257
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIP 694
+A++ L LD + R+ + E E R V K G + ++N+
Sbjct: 258 DAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAQEAVDKSQGLNLYLKNLD 317
Query: 695 FQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+++ELF +G + K +R P SG+ +G GFV F T EA RA+ +
Sbjct: 318 DSISDDKLKELFSPYGTITSCKVMRDP-----SGVSKGSGFVAFSTPEEASRALSEM 369
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+ N T+ + F + G + SV V R + S+GYG+V + +
Sbjct: 27 TSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQR-----SLGYGYVNYGNPQDA 81
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL+VL + L I + SNR+ T++R + I ++N+
Sbjct: 82 ARALEVLNFTPLHGKPIRIMYSNRD-----PTIRRSGN-------GNIFIKNLDKAIDHK 129
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ + SG +G+GFV++ + A++A++ L
Sbjct: 130 ALHDTFSAFGNILSCKV--AVDSSGQSKGYGFVQYDSDEAAQKAIEKL 175
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 155/390 (39%), Gaps = 94/390 (24%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG Y+ + + ++ +AL N + GK + I ++D + + SG
Sbjct: 68 LGYGYVNYGNPQDAARALEVLNFTPLHGKPIRIMYSNRDPTIRRSG-------------- 113
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
+G IF++NL + L F +G + + +D + +
Sbjct: 114 -------------------NGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVD-SSGQ 153
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KG+ V + E A +A + L+G + + +++ P K+ ER +
Sbjct: 154 SKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGPFVRKQ--------------ERDM- 198
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQA 496
V+ + VKNL TL +L+ +F FG IT + ++
Sbjct: 199 ----AVDKTRFTNVFVKNLSESTLEEELRKIFGEFGT----------ITSVAVMKDEDGK 244
Query: 497 KAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEE 556
F + + ++ +E A G + K+ G+ ++K+E E E + + E +A+E
Sbjct: 245 SRCFGFVNFENAEDAARAVE-ALNGYKLDNKDWFVGRAQKKSEREME--LKHRFEQSAQE 301
Query: 557 --DNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
D QG+ LY+KNL+ + ++D ++ F G I S V R
Sbjct: 302 AVDKSQGL-------------------NLYLKNLDDSISDDKLKELFSPYGTITSCKVMR 342
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
DP +S G GFV F T E ++AL
Sbjct: 343 --DPSG----VSKGSGFVAFSTPEEASRAL 366
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 25/191 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV+NLS + E++L K+F ++G + V + + E K++ F V F E A +A + L
Sbjct: 208 VFVKNLSESTLEEELRKIFGEFGTITSVAV-MKDEDGKSRCFGFVNFENAEDAARAVEAL 266
Query: 399 DG------TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+G F+GR K++E ++ + R + + V+ + +
Sbjct: 267 NGYKLDNKDWFVGR-------AQKKSEREME------LKHRFEQSAQEAVDKSQGLNLYL 313
Query: 453 KNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTK 507
KNL LK LF P+G + +V+ P G+ +G V F +A A + +
Sbjct: 314 KNLDDSISDDKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEMNGKM 373
Query: 508 FKEVPLYLEWA 518
PLY+ A
Sbjct: 374 VVSKPLYVALA 384
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKAL--- 275
V K ++ + VKNL +++L+ F T +A + KDE ++
Sbjct: 200 VDKTRFTNVFVKNLSESTLEEELRKIFGEF------GTITSVAVM--KDEDGKSRCFGFV 251
Query: 276 ---NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
N + + LN YK DN + G A + ME KH E S Q A D
Sbjct: 252 NFENAEDAARAVEALNGYKL--DNKDWFVGRAQKKSEREME---LKHRF--EQSAQEAVD 304
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
++ ++++NL ++++D L +LF YG + + D + +KG V F PE A+
Sbjct: 305 KSQGLNLYLKNLDDSISDDKLKELFSPYGTITSCKVMRDP-SGVSKGSGFVAFSTPEEAS 363
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKE 417
+A ++G + + + L++ + KE
Sbjct: 364 RALSEMNGKMVVSKPLYVALAQRKE 388
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 180/466 (38%), Gaps = 107/466 (22%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+A + ++V +L +T+ L LF + G + V + D T ++ G+ V + P+ A
Sbjct: 14 VANTASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAA 73
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+A L+ T G+ + ++ H S RK N I +
Sbjct: 74 RALDLLNFTPLNGKPIRIM-------------YSHRDPSIRKSGTAN----------IFI 110
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVL-----VPPYGIT---GLVEFLQKNQAKAAFNSLA 504
KNL D KAL + F G +L P G + G V+F + A+ A + L
Sbjct: 111 KNLDKSI---DNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLN 167
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
+ +Y+ G F +E+ K K
Sbjct: 168 GMLINDKQVYV-----GQFLRKQERETALNKTKF-------------------------- 196
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
+Y+KNL+ ++TE+ ++ F + G I SV V R D K
Sbjct: 197 ----------------NNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGK----- 235
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNV 680
S +GFV F + +A++ L DE + + K+ R LE + + V
Sbjct: 236 -SKCFGFVNFENADDAAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVV 294
Query: 681 AKQTGSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFIT 737
K G + ++N+ +++ELF FG + K +R P SG+ RG GFV F T
Sbjct: 295 DKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDP-----SGISRGSGFVAFST 349
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLE--WAEEADNVEDIRKRTNRYF 781
EA RA+ T + G+ +V + + A E+ R R F
Sbjct: 350 SEEASRAL------TEMNGKMVVSKPLYVALAQRKEERRARLQAQF 389
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 160/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D+KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDIKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 IKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 145/393 (36%), Gaps = 107/393 (27%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 NIKA----------------------------KHWKSQEDSVQFAEDI------------ 333
IKA H+++QE + + E +
Sbjct: 112 -IKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170
Query: 334 ----------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
AE G ++++N + ++ L LF K+GP V + D E+ K
Sbjct: 171 GRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGK 229
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTE 275
Query: 437 A---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT---- 485
F Q+ + R R + VKNL L+ F PFG + V G
Sbjct: 276 LKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGF 335
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
G V F +A A + PLY+ A
Sbjct: 336 GFVCFSSPEEATKAVTEMNGRVVATKPLYVALA 368
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G V + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRVVATKPLYVALAQRKE 372
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDIKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
++LF FG V++ M SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KDLFGKFGPALSVKV---MTDESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 263
Query: 762 EWAEE 766
A++
Sbjct: 264 GRAQK 268
>gi|296425387|ref|XP_002842223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638484|emb|CAZ86414.1| unnamed protein product [Tuber melanosporum]
Length = 1133
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 36/195 (18%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+TLY+ N + E IR FK CG I + +F S+ Y +
Sbjct: 746 STLYVTNFPPTADETCIRDLFKDCGEIVDI------------RFPSLKY---------NS 784
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSS-------NVAKQTGSKILVRNI 693
++ +Q +S DE Q + L + T V + S+ + A G ++ +RNI
Sbjct: 785 HRRFCYVQFASSDEAQKATSLHGKQLGGKETLVAKISAPDQKHERSGAVYEGREVYIRNI 844
Query: 694 PFQAKQSEVEELFKAFGELKFVRL---PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQ 750
FQA ++V+ELF+ +G ++ VRL PKK G H+G+GFV F K EA A++
Sbjct: 845 DFQAHDNDVQELFQKYGRIEKVRLPPGPKK----GTHKGYGFVTFSAKEEALAAVEG-AN 899
Query: 751 STHLYGRRLVLEWAE 765
+T L R L++ A+
Sbjct: 900 NTQLKYRTLIISIAD 914
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 46/184 (25%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
+TT+ +KNL N E +R+ F+ CG I S+ + +KD K+ V+F +RE
Sbjct: 669 NTTVIVKNLPPNYPEVRVRQFFRDCGTINSLKLIVEKDGKT-------STATVEFESRED 721
Query: 640 LNQA----LKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+ A LK+ +D H IE++ TGS + V N P
Sbjct: 722 VLTAQTKNLKI-----VDGHSIEVQVG---------------------TGSTLYVTNFPP 755
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
A ++ + +LFK GE+ +R P S HR F +V+F + +EA++A T L+
Sbjct: 756 TADETCIRDLFKDCGEIVDIRFPSLKYNS--HRRFCYVQFASSDEAQKA-------TSLH 806
Query: 756 GRRL 759
G++L
Sbjct: 807 GKQL 810
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 28/182 (15%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ E +++RN+ + ++D+ +LF+KYG + +V LP + KG+ VTF E A
Sbjct: 833 VYEGREVYIRNIDFQAHDNDVQELFQKYGRIEKVRLPPGPKKGTHKGYGFVTFSAKEEAL 892
Query: 393 QAYQHLDGTVFLGRMLHLI-----PGKPKENEGNVDG-KVHCCISERKLD---------- 436
A + + T R L + P K K N K+ S+R D
Sbjct: 893 AAVEGANNTQLKYRTLIISIADPNPSKQKTTNANPSTEKMRDSASDRNTDRPRQKSAYPA 952
Query: 437 --------AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLV 488
AF+ + ++ + + NL T ++ +FE +G L +V + P +V
Sbjct: 953 ASQQPPAPAFSDI----KQKTLGIMNLSDTVNDTKIRHMFEKYGPLRKVALRPDHQGAIV 1008
Query: 489 EF 490
E+
Sbjct: 1009 EY 1010
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 160/433 (36%), Gaps = 86/433 (19%)
Query: 196 KLKTKSKDT-APSDPSV-PPVSKAPVHKR--QYHTIVVKNLPAGVKKKDLKAYFKPLPLA 251
K K+K+ +T AP P+ P K+ V KR + T++VKNLP + ++ +F+
Sbjct: 637 KKKSKAAETLAPEQPAAHSPSPKSSVAKRDRENTTVIVKNLPPNYPEVRVRQFFRDC--- 693
Query: 252 SVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNAS 311
T + I KD K + + +D A
Sbjct: 694 ---GTINSLKLIVEKDGKTSTATVEFE------------------------SREDVLTAQ 726
Query: 312 MENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPID 371
+N+K S E VQ + ++V N T E + LF+ G + ++ P
Sbjct: 727 TKNLKIVDGHSIE--VQ----VGTGSTLYVTNFPPTADETCIRDLFKDCGEIVDIRFPSL 780
Query: 372 KETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCIS 431
K + F V F + A +A LH GK + + K+
Sbjct: 781 KYNSHRR-FCYVQFASSDEAQKATS-----------LH---GKQLGGKETLVAKISA--P 823
Query: 432 ERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPP------YGIT 485
++K + V E R + ++N+ ++ D++ LF+ +G + +V +PP +
Sbjct: 824 DQKHERSGAVYEGRE---VYIRNIDFQAHDNDVQELFQKYGRIEKVRLPPGPKKGTHKGY 880
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG 545
G V F K +A AA T+ K L + A + + K+K N E
Sbjct: 881 GFVTFSAKEEALAAVEGANNTQLKYRTLIISIA---------DPNPSKQKTTNANPSTE- 930
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEP------DTTLYIKNLNFNSTEDSIRR 599
K + D P + ++ P P TL I NL+ + IR
Sbjct: 931 ----KMRDSASDRNTDRPRQKSAYPAASQQPPAPAFSDIKQKTLGIMNLSDTVNDTKIRH 986
Query: 600 HFKKCGPIASVTV 612
F+K GP+ V +
Sbjct: 987 MFEKYGPLRKVAL 999
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+YI+N++F + ++ ++ F+K G I V + P P + GYGFV F +E
Sbjct: 839 VYIRNIDFQAHDNDVQELFQKYGRIEKVRL-----PPGPKKGTHKGYGFVTFSAKEEALA 893
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGS 686
A++ N+ L + + ++ N + TT S+ + + S
Sbjct: 894 AVEGANNTQLKYRTLIISIADPNPSKQKTTNANPSTEKMRDSAS 937
>gi|395548760|ref|XP_003775245.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 730
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 165/425 (38%), Gaps = 99/425 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L + VTE L + F GP+ + + D T ++ G+A V F QHL
Sbjct: 112 LYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNF----------QHL 161
Query: 399 -DGTVFLGRM-LHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
D + M L++I GKP V S+R + + VKNL
Sbjct: 162 ADAERVMTDMNLYIIKGKP----------VRLMWSQRDPSLRKSGIGN-----VFVKNLE 206
Query: 457 YRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKF 508
+ K+L++ F G +L IT G V F + A+ A +
Sbjct: 207 KSI---NNKSLYDAFSSFGNILSCKV-ITDDNGSKGYGFVHFEHRESAERAIQKMNGILL 262
Query: 509 KEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEEN 568
++ +++ G K + + E E G + ++
Sbjct: 263 NDLKIFV----------------GHFKSRKDRESELGAQTRE------------------ 288
Query: 569 VEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
T +YIKN + ED + + F+K GP SV V R + S G
Sbjct: 289 -----------FTNVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRDDCGR------SKG 331
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVAKQ 683
+GFV F E A+ + L+ QI R+ + LE + T ++R K + + +
Sbjct: 332 FGFVNFQKHEDAQNAIDNMNGKELNGRQIYAGRAQKKLERQ-TQLQRHFEQLKQNRIVRY 390
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
G + ++N+ + + F +FG + ++ M+ +G +GFGFV F EA
Sbjct: 391 QGVNLYIKNLDDDIDDENLRKEFSSFGTITSAKV---MMNNGRSKGFGFVCFSAPEEATT 447
Query: 744 AMKAL 748
A+ +
Sbjct: 448 AVTEM 452
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 252 SVRTTFLGMAYIGFKDEKNCNKALNKNKSFWK-----GKQLNIYKYSKDNSAKYSG---- 302
S+R + +G ++ KN K++N NKS + G L+ + DN +K G
Sbjct: 191 SLRKSGIGNVFV-----KNLEKSIN-NKSLYDAFSSFGNILSCKVITDDNGSKGYGFVHF 244
Query: 303 --------AADDNNNASMENIK--AKHWKSQEDS-VQFAEDIAESGRIFVRNLSYTVTED 351
A N + ++K H+KS++D + E ++++N + ED
Sbjct: 245 EHRESAERAIQKMNGILLNDLKIFVGHFKSRKDRESELGAQTREFTNVYIKNFGEDMDED 304
Query: 352 DLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLH 409
L+K+FEK+GP V + D + ++KGF V F E A A +++G GR ++
Sbjct: 305 RLSKIFEKFGPTLSVKVMRD-DCGRSKGFGFVNFQKHEDAQNAIDNMNGKELNGRQIY 361
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+++KNL + S+ F G I S V + S GYGFV F RES +
Sbjct: 200 VFVKNLEKSINNKSLYDAFSSFGNILSCKVITDDNG-------SKGYGFVHFEHRESAER 252
Query: 643 ALKVLQNSSLDEHQIELK--RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
A++ + L++ +I + +S ++ ESE R+ +NV ++N +
Sbjct: 253 AIQKMNGILLNDLKIFVGHFKSRKDRESELGAQTREFTNV--------YIKNFGEDMDED 304
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
+ ++F+ FG V++ + G +GFGFV F +A+ A+ + L GR++
Sbjct: 305 RLSKIFEKFGPTLSVKVMRDDCGRS--KGFGFVNFQKHEDAQNAIDNM-NGKELNGRQI- 360
Query: 761 LEWAEEADNVEDIRKRTNRYF 781
+A A + + + R+F
Sbjct: 361 --YAGRAQKKLERQTQLQRHF 379
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+LY+ +L+ TE + F GPI S+ V R S+GY +V F + L
Sbjct: 111 SLYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHR-----SLGYAYVNF---QHLA 162
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE 701
A +V+ + +L I + R + S+ RKS + V+N+
Sbjct: 163 DAERVMTDMNL---YIIKGKPVRLMWSQRDPSLRKSGI------GNVFVKNLEKSINNKS 213
Query: 702 VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F +FG + ++ GS +G+GFV F + A+RA++ +
Sbjct: 214 LYDAFSSFGNILSCKVITDDNGS---KGYGFVHFEHRESAERAIQKM 257
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 22/125 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
++++NL + +++L K F +G + A+V++ ++KGF V F PE AT A
Sbjct: 395 LYIKNLDDDIDDENLRKEFSSFGTITSAKVMM----NNGRSKGFGFVCFSAPEEATTAVT 450
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVE--ARSKRIILVKN 454
++G + + L++ + KE ERK NQ V+ AR +
Sbjct: 451 EMNGRLVASKPLYVALAQRKE--------------ERKAHLANQYVQRMARIRSTATPTL 496
Query: 455 LPYRT 459
PYRT
Sbjct: 497 GPYRT 501
>gi|126273923|ref|XP_001387749.1| nuclear localization sequence binding protein [Scheffersomyces
stipitis CBS 6054]
gi|126213619|gb|EAZ63726.1| nuclear localization sequence binding protein, partial
[Scheffersomyces stipitis CBS 6054]
Length = 245
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++ L++N ++ +RR F+ P+ V AR ++ G+ S GYG+V F ++ +
Sbjct: 4 TLFVGRLSWNIDDEWLRREFE---PLGGVISARVIMERATGK--SRGYGYVDFDSKSAAE 58
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSK-------ILVRNIP 694
+AL Q LD I L ++ + V + + N AKQ G + + N+
Sbjct: 59 KALNEYQGRELDGRPINL-----DMSTGKPHVTKSTENRAKQYGDTPSAPSDTLFIGNLS 113
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
F A + + +F G + R+P + +GFG+V+F + +EAK AM+AL ++
Sbjct: 114 FNADRDNLFNIFGVHGTVISCRIPTH-PDTQQPKGFGYVQFSSVDEAKAAMEAL-NGEYI 171
Query: 755 YGRRLVLEWAEEAD 768
GR L+++ D
Sbjct: 172 EGRACRLDFSTPKD 185
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 81/202 (40%), Gaps = 30/202 (14%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP-LASVRTTF-------LGMAYIGFKDEKNCNKALNK 277
T+ V L + + L+ F+PL + S R G Y+ F + KALN+
Sbjct: 4 TLFVGRLSWNIDDEWLRREFEPLGGVISARVIMERATGKSRGYGYVDFDSKSAAEKALNE 63
Query: 278 NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDI--AE 335
++G++L+ N M K KS E+ + D A
Sbjct: 64 ----YQGRELDGRPI----------------NLDMSTGKPHVTKSTENRAKQYGDTPSAP 103
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +F+ NLS+ D+L +F +G + +P +T + KGF V F + A A
Sbjct: 104 SDTLFIGNLSFNADRDNLFNIFGVHGTVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAAM 163
Query: 396 QHLDGTVFLGRMLHLIPGKPKE 417
+ L+G GR L PK+
Sbjct: 164 EALNGEYIEGRACRLDFSTPKD 185
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 23/179 (12%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E +FV LS+ + ++ L + FE G + + +++ T K++G+ V F A +A
Sbjct: 1 EPATLFVGRLSWNIDDEWLRREFEPLGGVISARVIMERATGKSRGYGYVDFDSKSAAEKA 60
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCIS-ERKLDAFNQVVEARSKRIILVK 453
G GR ++L GK H S E + + A S + +
Sbjct: 61 LNEYQGRELDGRPINL---------DMSTGKPHVTKSTENRAKQYGDTPSAPSD-TLFIG 110
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVL---VPPYGIT------GLVEFLQKNQAKAAFNSL 503
NL + D LF FG G V+ +P + T G V+F ++AKAA +L
Sbjct: 111 NLSFN---ADRDNLFNIFGVHGTVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAAMEAL 166
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 557 DNQQGVPEVEENVEEDEEREPE----PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
D G P V ++ E ++ + P TL+I NL+FN+ D++ F G + S +
Sbjct: 77 DMSTGKPHVTKSTENRAKQYGDTPSAPSDTLFIGNLSFNADRDNLFNIFGVHGTVISCRI 136
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
D + P G+G+VQF + + A++ L ++ L
Sbjct: 137 PTHPDTQQP-----KGFGYVQFSSVDEAKAAMEALNGEYIEGRACRL 178
>gi|428313428|ref|YP_007124405.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428255040|gb|AFZ20999.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 93
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT +DL+ +F +YG + V +P D+ET +++GF V A Q L
Sbjct: 3 IYVGNLSYQVTSEDLSSVFAEYGTVKRVQIPTDRETGRSRGFGFVEMETEAEEDAAIQEL 62
Query: 399 DGTVFLGRMLHLIPGKPKENE 419
DG ++GR L + KP+E++
Sbjct: 63 DGAEWMGRSLKVNKAKPREDQ 83
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ +Q ++ +F +G +K V++P +G RGFGFVE T+ E A++
Sbjct: 3 IYVGNLSYQVTSEDLSSVFAEYGTVKRVQIPTDRE-TGRSRGFGFVEMETEAEEDAAIQE 61
Query: 748 LCQSTHLYGRRL 759
L GR L
Sbjct: 62 L-DGAEWMGRSL 72
>gi|19549690|ref|NP_599125.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|19549692|ref|NP_599126.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|62471589|ref|NP_001014462.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|221330652|ref|NP_476936.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|158227|gb|AAC13646.1| RNA-binding protein [Drosophila melanogaster]
gi|22945352|gb|AAN10402.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|22945353|gb|AAN10403.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|40714603|gb|AAR88559.1| GH26440p [Drosophila melanogaster]
gi|61678275|gb|AAX52651.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|220901921|gb|AAN10401.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|220951536|gb|ACL88311.1| Rbp9-PE [synthetic construct]
Length = 439
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 105 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 159
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 160 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 205
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
QS++E LF +G++ R+ + +GL +G GF+ F + EA RA+K L +T
Sbjct: 206 NMTQSDLESLFSPYGKIITSRILCDNI-TGLSKGVGFIRFDQRFEADRAIKELNGTT 261
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IA SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 351 IASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 410
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A Q L+G R+L +
Sbjct: 411 VLAIQSLNGYTLGNRVLQV 429
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 112 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 171
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 172 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 206
Query: 459 TLPTDLKALFEPFGDL--GRVLVPPYGITGL------VEFLQKNQAKAAFNSLAYTKFKE 510
+DL++LF P+G + R+L ITGL + F Q+ +A A L T K
Sbjct: 207 MTQSDLESLFSPYGKIITSRILCD--NITGLSKGVGFIRFDQRFEADRAIKELNGTTPKN 264
Query: 511 V--PLYLEWA 518
P+ +++A
Sbjct: 265 STEPITVKFA 274
>gi|334118594|ref|ZP_08492683.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
gi|333459601|gb|EGK88214.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
Length = 95
Score = 72.4 bits (176), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I++ NLSY TE+DLT +F +YG + V+LP D+ET + +GFA V + A L
Sbjct: 3 IYIGNLSYRATEEDLTAVFAEYGTVKRVVLPTDRETGRMRGFAFVEMMEDAQEDAAIAEL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG ++GR L + KPKE EGN
Sbjct: 63 DGAEWMGRPLRVNKAKPKE-EGN 84
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 170/422 (40%), Gaps = 93/422 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L +V + L +F + G + V + D T ++ G+A V + P A +A + L
Sbjct: 42 LYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARALEML 101
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + ++ N D S RK N I +KNL
Sbjct: 102 NFTPINGKPIRIM-------YSNRD------PSLRKSGTAN----------IFIKNLDKS 138
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTKFKE 510
D KAL++ F G +L G V++ + A+AA + L +
Sbjct: 139 I---DNKALYDTFCVFGNILSCKVATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMND 195
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ G F +E+ DN G +V+ N
Sbjct: 196 KKVYV-----GPFIRKQER---------------------------DNSPG--QVKFN-- 219
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
+Y+KNL+ N+TED ++ F K G I S V R+ D + S +G
Sbjct: 220 -----------NVYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGR------SKCFG 262
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA----KQTGS 686
FV F + + QA++ L D+ + + R+ + E E ++ N+ K +
Sbjct: 263 FVNFESPDDAAQAVQELNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNT 322
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+ ++N+ ++ ELF +G + ++ + +G+ RG GFV F + +A RA+
Sbjct: 323 NLYLKNLDDSVDDDKLRELFAEYGTITSCKVMRD--SNGVSRGSGFVAFKSAEDASRALA 380
Query: 747 AL 748
+
Sbjct: 381 EM 382
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P T+LY+ +L+ + + + F + G + SV V R + + S+GY +V + +
Sbjct: 38 PATSLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRR-----SLGYAYVNYSSPA 92
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL++L + ++ I + SNR+ ++ K + I ++N+
Sbjct: 93 DAARALEMLNFTPINGKPIRIMYSNRD------------PSLRKSGTANIFIKNLDKSID 140
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F FG + ++ SG +G+GFV++ A+ A+ L
Sbjct: 141 NKALYDTFCVFGNILSCKVATD--ASGESKGYGFVQYERDEAAQAAIDKL 188
>gi|442625619|ref|NP_001259974.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
gi|440213243|gb|AGB92511.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
Length = 684
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 105 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 159
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 160 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 205
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
QS++E LF +G++ R+ + +GL +G GF+ F + EA RA+K L +T
Sbjct: 206 NMTQSDLESLFSPYGKIITSRILCDNI-TGLSKGVGFIRFDQRFEADRAIKELNGTT 261
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IA SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 351 IASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 410
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A Q L+G R+L +
Sbjct: 411 VLAIQSLNGYTLGNRVLQV 429
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 112 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 171
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 172 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 206
Query: 459 TLPTDLKALFEPFGDL--GRVLVPPYGITGL---VEFLQKNQ 495
+DL++LF P+G + R+L ITGL V F++ +Q
Sbjct: 207 MTQSDLESLFSPYGKIITSRILCD--NITGLSKGVGFIRFDQ 246
>gi|428300369|ref|YP_007138675.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
gi|428236913|gb|AFZ02703.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
Length = 115
Score = 72.4 bits (176), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 51/83 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY+VT+DDLTK+F +YG + V LP D+ET + +GF V T A L
Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGTVTRVQLPTDRETGRVRGFGFVEMESEAAETAAISAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG ++GR L + +PKE + +
Sbjct: 63 DGAEWMGRALKVNKARPKEEKND 85
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 259 GMAYIGFKDEKNCNKALN-KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G Y+ F++ KA N KN +F +G+++ + SK N AD +A
Sbjct: 338 GFGYVDFENPDAAEKAYNEKNGAFLQGREMRLDFASKPN-------ADAPPSARAAERAR 390
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
KH D + ES +FV NL ++ ED ++K F K + + +P D+E+ +
Sbjct: 391 KHG----DVIS-----PESDTLFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRP 441
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
KGFA VTF E A +A++ L+G+ GR + L KP+++
Sbjct: 442 KGFAYVTFSSVEDAKKAFETLNGSDLDGRPVRLDYAKPRDS 482
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
PE DT L++ NL F++ EDS+ + F K + S+ + ++ P G+ +V F +
Sbjct: 398 PESDT-LFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRP-----KGFAYVTFSS 451
Query: 637 RESLNQALKVLQNSSLDEHQIEL 659
E +A + L S LD + L
Sbjct: 452 VEDAKKAFETLNGSDLDGRPVRL 474
>gi|302926157|ref|XP_003054238.1| hypothetical protein NECHADRAFT_102368 [Nectria haematococca mpVI
77-13-4]
gi|256735179|gb|EEU48525.1| hypothetical protein NECHADRAFT_102368 [Nectria haematococca mpVI
77-13-4]
Length = 507
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 13/191 (6%)
Query: 564 EVEENVEEDEEREPEPD--TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
+ E++++ DE ++ + D TTL+ +L++N +D++ FK+ + V +K
Sbjct: 232 KAEDDIDSDEAKKTKTDAPTTLFAGSLSWNIDDDALYEAFKEFNGLVGARVVTEK----- 286
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN-----RNLESEATTVKRK 676
G S G+G+V F E +A + +Q LD + L +N N A ++
Sbjct: 287 GTGRSRGFGYVDFNDPEGCTKAYEAMQGFELDGRALNLDYANARPADANPAGRAADRAKR 346
Query: 677 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
+ + V N+PF Q V E F E+ VRLP SG +GFG+V F
Sbjct: 347 HGDTLSPESDTLFVGNLPFDVDQDAVREFFGEVAEVASVRLPTDP-DSGNLKGFGYVSFN 405
Query: 737 TKNEAKRAMKA 747
+ +AK + A
Sbjct: 406 SVEDAKAVIDA 416
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F +LS+ + +D L + F+++ L + +K T +++GF V F PE T+AY+ +
Sbjct: 253 LFAGSLSWNIDDDALYEAFKEFNGLVGARVVTEKGTGRSRGFGYVDFNDPEGCTKAYEAM 312
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
G GR L+L + + N G+ ++R D + + + V NLP+
Sbjct: 313 QGFELDGRALNLDYANARPADANPAGRA-ADRAKRHGDTLSPESD-----TLFVGNLPFD 366
Query: 459 TLPTDLKALFEPFGDLGRV 477
D A+ E FG++ V
Sbjct: 367 ---VDQDAVREFFGEVAEV 382
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 20/156 (12%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSF-WKGKQLNI-YKYSKDNSAKYSGAADDNNNASMENIK 316
G Y+ F D + C KA + F G+ LN+ Y ++ A +G A D
Sbjct: 293 GFGYVDFNDPEGCTKAYEAMQGFELDGRALNLDYANARPADANPAGRAAD---------- 342
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
K D++ ES +FV NL + V +D + + F + +A V LP D ++
Sbjct: 343 --RAKRHGDTLS-----PESDTLFVGNLPFDVDQDAVREFFGEVAEVASVRLPTDPDSGN 395
Query: 377 TKGFALVTFLMPEHATQAYQHLDGT-VFLGRMLHLI 411
KGF V+F E A +G + GRM +
Sbjct: 396 LKGFGYVSFNSVEDAKAVIDAKNGAPIGNGRMSRSV 431
>gi|186685885|ref|YP_001869081.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186468337|gb|ACC84138.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 109
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT+D L+ +F +YG + V LP D+ET + +GFA V + T+A + L
Sbjct: 3 IYVGNLSYEVTQDALSTVFAEYGSVKRVQLPTDRETGRLRGFAFVEMSSEDEETKAIESL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KP+E+
Sbjct: 63 DGAEWMGRDLKVNKAKPRED 82
Score = 39.7 bits (91), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTE-GKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y++TQ+ L F E G+V VQL E G+ R FAF+ ED+ A++ +
Sbjct: 10 YEVTQDALSTVFAEYGSVKRVQLPTDRETGRLRGFAFVEMSSEDEETKAIESLDGAEWMG 69
Query: 86 SRIKVEKC 93
+KV K
Sbjct: 70 RDLKVNKA 77
>gi|428183055|gb|EKX51914.1| hypothetical protein GUITHDRAFT_84932 [Guillardia theta CCMP2712]
Length = 616
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 183/471 (38%), Gaps = 115/471 (24%)
Query: 213 PVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------FLGMAYIG 264
PV++ P+ ++ V +L V + L F + P+AS+R LG AY+
Sbjct: 15 PVTQPPLAS---ASLYVGDLDPNVTEPQLFEVFSVVGPVASIRVCRDAMTRRSLGYAYVN 71
Query: 265 FKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
F + + +AL+ N + KGK I +D S + SGA
Sbjct: 72 FHNVVDAERALDTLNYTQIKGKACRIMWKHRDPSIRKSGA-------------------- 111
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
G IF++NL TV L F ++G + + +D+ + ++GF V
Sbjct: 112 -------------GNIFIKNLDKTVDTRTLHDTFSQFGNILSCKVSMDEHAN-SRGFGFV 157
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVE 443
F E A +A ++G + + L + P P+ + +G ER+
Sbjct: 158 QFETAEEANEAISKVNGMLLEDKRLFVGPFIPRGERESTNG-------ERRFTN------ 204
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKA 498
+ VKN P D + FE +G++ +++ G + G V F + + AK
Sbjct: 205 ------VYVKNFPDNVSDDDFRKSFERYGEITSCKIMRKEDGTSKCFGFVNFKEADDAKK 258
Query: 499 AFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDN 558
+ K P E ++A EK E E+KE ++ +
Sbjct: 259 CCEEMNGQK----PFGGE---RDIYAGRAEK----------------ESERKEKLKKKYD 295
Query: 559 QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
Q + ++ N LYIKNL+ ++ +R+ F++ G I S V R KD
Sbjct: 296 QIRMERLKNNQL----------VNLYIKNLDDTIDDEKLRQTFEQFGTITSAKVMRDKDR 345
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDE-------HQ-IELKR 661
+S G+GFV F E +A+ + + HQ IE++R
Sbjct: 346 PE----VSKGFGFVCFAQPEEATRAVTAMNGQMVGTKPIYVALHQPIEIRR 392
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 156/427 (36%), Gaps = 93/427 (21%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V +L VTE L ++F GP+A + + D T ++ G+A V F A +A
Sbjct: 23 SASLYVGDLDPNVTEPQLFEVFSVVGPVASIRVCRDAMTRRSLGYAYVNFHNVVDAERAL 82
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
L+ T G+ ++ H S RK A N I +KNL
Sbjct: 83 DTLNYTQIKGKACRIM-------------WKHRDPSIRKSGAGN----------IFIKNL 119
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLAYTK 507
+T+ D + L + F G +L + G V+F +A A + +
Sbjct: 120 D-KTV--DTRTLHDTFSQFGNILSCKVSMDEHANSRGFGFVQFETAEEANEAISKV---- 172
Query: 508 FKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEE 567
G+ E K G + E E GE
Sbjct: 173 ------------NGMLLEDKRLFVGPFIPRGERESTNGERRF------------------ 202
Query: 568 NVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSM 627
T +Y+KN N ++D R+ F++ G I S + RK+D S
Sbjct: 203 -------------TNVYVKNFPDNVSDDDFRKSFERYGEITSCKIMRKEDGTSK------ 243
Query: 628 GYGFVQFYTRESLNQALKVL--QNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVA 681
+GFV F + + + + Q E I R+ + E + K+ + +
Sbjct: 244 CFGFVNFKEADDAKKCCEEMNGQKPFGGERDIYAGRAEKESERKEKLKKKYDQIRMERLK 303
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ ++N+ ++ + F+ FG + ++ + + +GFGFV F EA
Sbjct: 304 NNQLVNLYIKNLDDTIDDEKLRQTFEQFGTITSAKVMRDKDRPEVSKGFGFVCFAQPEEA 363
Query: 742 KRAMKAL 748
RA+ A+
Sbjct: 364 TRAVTAM 370
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 25/208 (12%)
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
P +LY+ +L+ N TE + F GP+AS+ V R + S+GY +V F+
Sbjct: 20 PLASASLYVGDLDPNVTEPQLFEVFSVVGPVASIRVCRDAMTRR-----SLGYAYVNFHN 74
Query: 637 RESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
+AL +L+ QI+ K K + ++ K I ++N+
Sbjct: 75 VVDAERAL-----DTLNYTQIKGKACR-------IMWKHRDPSIRKSGAGNIFIKNLDKT 122
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK----ALCQST 752
+ + F FG + ++ M RGFGFV+F T EA A+ L +
Sbjct: 123 VDTRTLHDTFSQFGNILSCKV--SMDEHANSRGFGFVQFETAEEANEAISKVNGMLLEDK 180
Query: 753 HLYGRRLVLEWAEEADNVEDIRKRTNRY 780
L+ + E+ N E R+ TN Y
Sbjct: 181 RLFVGPFIPRGERESTNGE--RRFTNVY 206
>gi|340728933|ref|XP_003402766.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus terrestris]
Length = 914
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 98/182 (53%), Gaps = 13/182 (7%)
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
E +E D E + +++I NL+++ TE+ +R GPI + + R + +S
Sbjct: 661 EQMEIDYVHEVDDKISVFISNLDYSVTEEEVRNALNPAGPITMLKMIRSYNGRSK----- 715
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGS 686
GY +VQ ++E++++AL+ L + + + R + N ++ +V + S ++ K +
Sbjct: 716 -GYCYVQLNSKEAVDKALE-LDRVPIRGRPMFVSRCDPN-KTTRESVFKYSCSLEK---N 769
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
K+ V+ +P + ++EE+FK G LK VR+ +G +G +VEF+ +N A +A+
Sbjct: 770 KLFVKGLPVTTTKEDLEEIFKVHGSLKEVRIV--TYRNGHSKGLAYVEFVDENSAGKALL 827
Query: 747 AL 748
A+
Sbjct: 828 AI 829
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 24/188 (12%)
Query: 322 SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFA 381
S++ + + ++ + +F+ NL Y+VTE+++ GP+ + + I ++KG+
Sbjct: 660 SEQMEIDYVHEVDDKISVFISNLDYSVTEEEVRNALNPAGPITMLKM-IRSYNGRSKGYC 718
Query: 382 LVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQV 441
V E +A + LD GR + + P + K C + + KL
Sbjct: 719 YVQLNSKEAVDKALE-LDRVPIRGRPMFVSRCDPNKTTRESVFKYSCSLEKNKL------ 771
Query: 442 VEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY------GITGLVEFLQKNQ 495
VK LP T DL+ +F+ G L V + Y G+ VEF+ +N
Sbjct: 772 ---------FVKGLPVTTTKEDLEEIFKVHGSLKEVRIVTYRNGHSKGL-AYVEFVDENS 821
Query: 496 AKAAFNSL 503
A A ++
Sbjct: 822 AGKALLAI 829
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E ++FV+ L T T++DL ++F+ +G L EV + + +KG A V F+ A +A
Sbjct: 767 EKNKLFVKGLPVTTTKEDLEEIFKVHGSLKEVRI-VTYRNGHSKGLAYVEFVDENSAGKA 825
Query: 395 YQHLDGTVFLGRMLHLIPGKPKE 417
+DG +++ + +P E
Sbjct: 826 LLAIDGMKIGDKIISVAISQPPE 848
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 180/466 (38%), Gaps = 107/466 (22%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+A + ++V +L +T+ L LF + G + V + D T ++ G+ V + P+ A
Sbjct: 14 VANTASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAA 73
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+A L+ T G+ + ++ H S RK N I +
Sbjct: 74 RALDLLNFTPLNGKPIRIM-------------YSHRDPSIRKSGTAN----------IFI 110
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVL-----VPPYGIT---GLVEFLQKNQAKAAFNSLA 504
KNL D KAL + F G +L P G + G V+F + A+ A + L
Sbjct: 111 KNLDKSI---DNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLN 167
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
+ +Y+ G F +E+ K K
Sbjct: 168 GMLINDKQVYV-----GQFLRKQERETALNKTKF-------------------------- 196
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
+Y+KNL+ ++TE+ ++ F + G I SV V R D K
Sbjct: 197 ----------------NNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGK----- 235
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNV 680
S +GFV F + +A++ L DE + + K+ R LE + + V
Sbjct: 236 -SKCFGFVNFENADDAAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVV 294
Query: 681 AKQTGSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFIT 737
K G + ++N+ +++ELF FG + K +R P SG+ RG GFV F T
Sbjct: 295 DKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDP-----SGISRGSGFVAFST 349
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLE--WAEEADNVEDIRKRTNRYF 781
EA RA+ T + G+ +V + + A E+ R R F
Sbjct: 350 SEEASRAL------TEMNGKMVVSKPLYVALAQRKEERRARLQAQF 389
>gi|195161932|ref|XP_002021810.1| GL26299 [Drosophila persimilis]
gi|194103610|gb|EDW25653.1| GL26299 [Drosophila persimilis]
Length = 678
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 105 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 159
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 160 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 205
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
QS++E LF +G++ R+ + +GL +G GF+ F + EA RA+K L +T
Sbjct: 206 NMTQSDLESLFSPYGKIITSRILCDNI-TGLSKGVGFIRFDQRFEADRAIKELNGTT 261
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IA SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 351 IASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 410
Query: 392 TQAYQHLDGTVFLGRMLH 409
A Q L+G R+L
Sbjct: 411 VLAIQSLNGYTLGNRVLQ 428
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 112 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 171
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 172 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 206
Query: 459 TLPTDLKALFEPFGDL--GRVLVPPYGITGL---VEFLQKNQ 495
+DL++LF P+G + R+L ITGL V F++ +Q
Sbjct: 207 MTQSDLESLFSPYGKIITSRILCD--NITGLSKGVGFIRFDQ 246
>gi|428210291|ref|YP_007094644.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428012212|gb|AFY90775.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 101
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 52/87 (59%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT +DL+ F +YG + V LP D+ET + +GFA V T A L
Sbjct: 3 IYVGNLSYEVTPEDLSAAFAQYGSVKRVQLPTDRETGRVRGFAFVEMDTDAEETTAIDAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGK 425
DG ++GR + + KP+E+ G+ DG+
Sbjct: 63 DGAEWMGRNMKVNKAKPREDRGSSDGR 89
>gi|323335711|gb|EGA76992.1| Pub1p [Saccharomyces cerevisiae Vin13]
Length = 453
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 113/276 (40%), Gaps = 69/276 (25%)
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
P+ +E P V A A ++ E E+ E+ + EN P V
Sbjct: 17 PVAVE-TPSAVEAPASADPSSEQSXAVEGNSEQAEDNQGEND---------PSVVPANAI 66
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
RE D LY+ NL+ TED ++++F+ GPIA++ + K+ K ++ Y F
Sbjct: 67 TGGRETS-DRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNK------NVNYAF 119
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
V+++ N AL+ L KQ + I+
Sbjct: 120 VEYHQSHDANIALQTLN--------------------------------GKQIENNIVKI 147
Query: 692 NIPFQAKQSEVEELFKAF-GELK-----------FVRLPKKMVG-------SGLHRGFGF 732
N FQ++QS ++ F F G+L F P + G +G RG+GF
Sbjct: 148 NWAFQSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGF 207
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
V F ++++A+ AM ++ Q L GR L + WA + D
Sbjct: 208 VSFTSQDDAQNAMDSM-QGQDLNGRPLRINWAAKRD 242
>gi|432118841|gb|ELK38215.1| Polyadenylate-binding protein 5 [Myotis davidii]
Length = 382
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 155/411 (37%), Gaps = 80/411 (19%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
V +L VTED L K F GPL + D ET G+ V F P A A ++
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPETRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 401 TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTL 460
+ G+ L+ +P + RK N I +KNL
Sbjct: 82 DLINGKPFRLMWSQPDDRL-------------RKSGVGN----------IFIKNLDKSID 118
Query: 461 PTDLKALFEPFGDL--GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
L LF FG++ +V+ G K A F+SLA W
Sbjct: 119 NRALFYLFSAFGNILSCKVVCDDNG--------SKGYAYVHFDSLAAAN------RAIWH 164
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
GV ++ G+ K PE E E R+
Sbjct: 165 MNGVRLNNRQVYVGRFK--------------------------FPE--ERAAEVRTRDRA 196
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +++KN ++ ++ F + GP SV V R KS G+GFV++ T E
Sbjct: 197 TFTNVFVKNFGDEVDDEKLKEIFSEYGPTESVKVIRDASGKSK------GFGFVRYETHE 250
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIP 694
+ +A+ L S+D + + R+ + +E A +R K ++ G + ++N+
Sbjct: 251 AAQKAVLDLHGKSIDGKALYVGRAQKKIERLAELRRRFERLKVKEKSRPPGVPVYIKNLD 310
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
++ E F +FG + ++ MV G +GFG V F + EA +A+
Sbjct: 311 ETIDDEKLREEFSSFGSISRAKV---MVEVGQGKGFGVVCFSSFEEATKAV 358
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V + S GY +V F + + N+
Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-------SKGYAYVHFDSLAAANR 160
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A+ + L+ Q+ + R + E A V+ + + T + + V+N + ++
Sbjct: 161 AIWHMNGVRLNNRQVYVGRF-KFPEERAAEVRTRD----RATFTNVFVKNFGDEVDDEKL 215
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
+E+F +G + V++ + SG +GFGFV + T A++A+ L + G+ L +
Sbjct: 216 KEIFSEYGPTESVKVIRD--ASGKSKGFGFVRYETHEAAQKAVLDL-HGKSIDGKALYVG 272
Query: 763 WAE-EADNVEDIRKRTNR 779
A+ + + + ++R+R R
Sbjct: 273 RAQKKIERLAELRRRFER 290
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 26/175 (14%)
Query: 585 IKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ +L+ + TED + + F+ GP+ + R + +SP +GYG+V F AL
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPETRSP-----LGYGYVNFRFPADAEWAL 76
Query: 645 KVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ ++ L + S+ RKS I ++N+ +
Sbjct: 77 NTMNFDLINGKPFRL------MWSQPDDRLRKSGV------GNIFIKNLDKSIDNRALFY 124
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
LF AFG + ++ GS +G+ +V F + A RA+ H+ G RL
Sbjct: 125 LFSAFGNILSCKVVCDDNGS---KGYAYVHFDSLAAANRAI------WHMNGVRL 170
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++++NL T+ ++ L + F +G ++ + + E + KGF +V F E AT+A +
Sbjct: 304 VYIKNLDETIDDEKLREEFSSFGSISRAKVMV--EVGQGKGFGVVCFSSFEEATKAVGEM 361
Query: 399 DGTVFLGRMLHLIPGKPK 416
+G + + LH+ G+ +
Sbjct: 362 NGRMVGSKPLHVTLGQAR 379
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D A +FV+N V ++ L ++F +YGP E + I + K+KGF V + E A
Sbjct: 194 DRATFTNVFVKNFGDEVDDEKLKEIFSEYGP-TESVKVIRDASGKSKGFGFVRYETHEAA 252
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A L G G+ L++
Sbjct: 253 QKAVLDLHGKSIDGKALYV 271
>gi|425434353|ref|ZP_18814822.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
gi|425450092|ref|ZP_18829924.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 7941]
gi|389676152|emb|CCH94759.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
gi|389769241|emb|CCI05872.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 7941]
Length = 100
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL Y VT +DL ++F +YG ++ V LP+D+ET K +GF V E +A + L
Sbjct: 3 IYVGNLVYDVTTNDLQEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIETL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR + + +PKE+
Sbjct: 63 DGAEWMGRQMKVNKARPKED 82
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 176/457 (38%), Gaps = 101/457 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VT+ L LF + G + V + D + ++ G+ V F P+ A +A L
Sbjct: 30 LYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARALDVL 89
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ T R + ++ P K +GN I +K
Sbjct: 90 NFTPLNNRPIRIMYSHRDPSIRKSGQGN----------------------------IFIK 121
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
NL R + D KAL + F G +L K A +S
Sbjct: 122 NLD-RAI--DHKALHDTFSTFGNIL----------------SCKVATDS----------- 151
Query: 514 YLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDE 573
+ K G + NEE ++ E K D Q V E +
Sbjct: 152 -----------SGQSKGYGFVQFDNEESAQKAIE-KLNGMLLNDKQVYVGPFLRKQERES 199
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
+ +++KNL+ ++T+D ++ F + G I S V R D K S +GFV
Sbjct: 200 TADKAKFNNVFVKNLSESTTDDELKNVFGEFGTITSAVVMRDGDGK------SKCFGFVN 253
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA----KQTGSKIL 689
F + +A++ L D+ + + ++ + E E +R ++ K G+ +
Sbjct: 254 FENADDAARAVEALNGKKFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLY 313
Query: 690 VRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
V+N+ +++ELF FG + K +R P +G+ RG GFV F T +EA RA+
Sbjct: 314 VKNLDDSLGDDKLKELFSPFGTITSCKVMRDP-----NGISRGSGFVAFSTPDEASRAL- 367
Query: 747 ALCQSTHLYGRRLVLE--WAEEADNVEDIRKRTNRYF 781
+ G+ +V + + A ED R R F
Sbjct: 368 -----LEMNGKMVVSKPLYVTLAQRKEDRRARLQAQF 399
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+ N T+ + F + G + SV V R + S+GYG+V F +
Sbjct: 28 TSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRR-----SLGYGYVNFSNPQDA 82
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL VL + L+ I + S+R+ ++ K I ++N+
Sbjct: 83 ARALDVLNFTPLNNRPIRIMYSHRD------------PSIRKSGQGNIFIKNLDRAIDHK 130
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F FG + ++ SG +G+GFV+F + A++A++ L
Sbjct: 131 ALHDTFSTFGNILSCKVATD--SSGQSKGYGFVQFDNEESAQKAIEKL 176
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 122/314 (38%), Gaps = 68/314 (21%)
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G IF++NL + L F +G + + D + ++KG+ V F E A +A +
Sbjct: 116 GNIFIKNLDRAIDHKALHDTFSTFGNILSCKVATD-SSGQSKGYGFVQFDNEESAQKAIE 174
Query: 397 HLDGTVFLGRMLHLIPG-KPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
L+G + + +++ P + +E E D FN V VKNL
Sbjct: 175 KLNGMLLNDKQVYVGPFLRKQERESTADKA-----------KFNNV---------FVKNL 214
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYG-----ITGLVEFLQKNQAKAAFNSLAYTKFKE 510
T +LK +F FG + +V G G V F + A A +L KF +
Sbjct: 215 SESTTDDELKNVFGEFGTITSAVVMRDGDGKSKCFGFVNFENADDAARAVEALNGKKFDD 274
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
KE GK ++K+E E E + ++ D QG
Sbjct: 275 ----------------KEWYVGKAQKKSERENELKQRFEQSMKEAADKYQG--------- 309
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
LY+KNL+ + +D ++ F G I S V R DP +S G G
Sbjct: 310 ----------ANLYVKNLDDSLGDDKLKELFSPFGTITSCKVMR--DPNG----ISRGSG 353
Query: 631 FVQFYTRESLNQAL 644
FV F T + ++AL
Sbjct: 354 FVAFSTPDEASRAL 367
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D A+ +FV+NLS + T+D+L +F ++G + ++ D + K+K F V F + A
Sbjct: 202 DKAKFNNVFVKNLSESTTDDELKNVFGEFGTITSAVVMRDGD-GKSKCFGFVNFENADDA 260
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKP-----KENEGNVDGKVHCCISERKLDAFNQVVEARS 446
+A + L+G F + ++ GK +ENE + +R + + +
Sbjct: 261 ARAVEALNGKKFDDKEWYV--GKAQKKSERENE----------LKQRFEQSMKEAADKYQ 308
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFN 501
+ VKNL LK LF PFG + +V+ P GI +G V F ++A A
Sbjct: 309 GANLYVKNLDDSLGDDKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALL 368
Query: 502 SLAYTKFKEVPLYLEWA 518
+ PLY+ A
Sbjct: 369 EMNGKMVVSKPLYVTLA 385
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
E S++ A D + ++V+NL ++ +D L +LF +G + + D ++G V
Sbjct: 297 EQSMKEAADKYQGANLYVKNLDDSLGDDKLKELFSPFGTITSCKVMRDP-NGISRGSGFV 355
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
F P+ A++A ++G + + + L++ + KE+
Sbjct: 356 AFSTPDEASRALLEMNGKMVVSKPLYVTLAQRKED 390
>gi|443654715|ref|ZP_21131411.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
gi|159026915|emb|CAO89166.1| rbpF/A2 [Microcystis aeruginosa PCC 7806]
gi|443333703|gb|ELS48246.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
Length = 100
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL Y VT +DL ++F +YG ++ V LP+D+ET K +GF V E +A + L
Sbjct: 3 IYVGNLVYEVTTNDLQEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIETL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR + + +PKE+
Sbjct: 63 DGAEWMGRQMKVNKARPKED 82
>gi|301107420|ref|XP_002902792.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097910|gb|EEY55962.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1005
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 137/335 (40%), Gaps = 69/335 (20%)
Query: 370 IDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCC 429
+ +ET K +ALV F + A A LD +F G +L + K VD K
Sbjct: 279 LKEETRTGKTYALVQFKTTKDAALAVAKLDHHIFKGSVLQV---KIAAKAVVVDDKEAAG 335
Query: 430 ISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV---------- 479
K + VE R+I V+NL ++T TDL+ LFE G L V V
Sbjct: 336 ----KPGLPKRAVETEGLRLI-VRNLAFQTTDTDLEKLFEVHGPLFEVRVVRMPVEEDTK 390
Query: 480 ------------PPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFA 524
P G + G V++ A+AA L TK K + ++ FA
Sbjct: 391 ESEEADGETNAEPVLGRSRGFGFVQYRDVADARAAVEKLNGTKLKGREMIVD------FA 444
Query: 525 EAKEKSKGKEKEKNEE-----EGEEGEEEKKENTAEEDNQQGVPEVEENVEED------- 572
+K K ++K+ EE EG+E +EE +ED + + E +
Sbjct: 445 LSKTKYLEQQKKHEEEAVAATEGDEEDEEANSGDEDEDQLEMATDGEAGAGSEDSDEEDG 504
Query: 573 -------------EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
E+ E + D TL+I+NL+F ++ED +R F+ G + V +K
Sbjct: 505 EEEEEEEAASAPREDTEAQRDRTLFIRNLSFQTSEDGLREFFQAFGAVEYARVVYEK--- 561
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDE 654
G LS G GFV+F + + + LK + DE
Sbjct: 562 --GSGLSKGVGFVRFKSADVAAEVLKRGEQPQGDE 594
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK----TKGFALVTFLMPEHATQA 394
+FVRNL + VT+++L +F + GP+ ++ + DK K T+GFA V F + A A
Sbjct: 4 VFVRNLPFGVTQEELEHVFSEIGPVRKIDVIKDKGKRKSEMLTRGFAFVKFAVESDAAVA 63
Query: 395 YQHLDGTVFLGRML 408
+ L+ T F GR +
Sbjct: 64 VEKLNKTDFQGRKM 77
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 19/93 (20%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE---VILPIDKET----------------D 375
E R+ VRNL++ T+ DL KLFE +GPL E V +P++++T
Sbjct: 347 EGLRLIVRNLAFQTTDTDLEKLFEVHGPLFEVRVVRMPVEEDTKESEEADGETNAEPVLG 406
Query: 376 KTKGFALVTFLMPEHATQAYQHLDGTVFLGRML 408
+++GF V + A A + L+GT GR +
Sbjct: 407 RSRGFGFVQYRDVADARAAVEKLNGTKLKGREM 439
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
Q + +RN+ FQ + + E F+AFG +++ R+ + GSGL +G GFV F + + A
Sbjct: 523 QRDRTLFIRNLSFQTSEDGLREFFQAFGAVEYARVVYEK-GSGLSKGVGFVRFKSADVAA 581
Query: 743 RAMK 746
+K
Sbjct: 582 EVLK 585
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK---KMVGSGLHRGFGFVEFITKNEAK 742
+ + VRN+PF Q E+E +F G ++ + + K K L RGF FV+F +++A
Sbjct: 2 ASVFVRNLPFGVTQEELEHVFSEIGPVRKIDVIKDKGKRKSEMLTRGFAFVKFAVESDAA 61
Query: 743 RAMKALCQSTHLYGRRLVL 761
A++ L + T GR++++
Sbjct: 62 VAVEKLNK-TDFQGRKMLI 79
>gi|354566485|ref|ZP_08985657.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353545501|gb|EHC14952.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 99
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NLSY VTED L +F +YG + V LP D+ET +GF V T A + L
Sbjct: 3 VYVGNLSYEVTEDSLNAVFAEYGSVKRVQLPTDRETGHVRGFGFVEMSTDAEETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG ++GR L + KPKE+ G+
Sbjct: 63 DGAEWMGRDLKVNKAKPKEDRGS 85
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 159/417 (38%), Gaps = 83/417 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VT+ L LF + G + V + D + ++ G+ V + P+ A +A + L
Sbjct: 29 LYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEVL 88
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T LH GKP + S R + + I +KNL
Sbjct: 89 NFTP-----LH---GKP----------IRIMYSNR-----DPTIRRSGNGNIFIKNL--- 122
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
D KAL + F G +L K A +S +K Y
Sbjct: 123 DKAIDHKALHDTFSAFGNIL----------------SCKVAVDSSGQSKGYGFVQY---- 162
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
+ EE + EK D Q V E D +
Sbjct: 163 -------------------DSEEAAQKAIEKLNGMLLNDKQVYVGPFVRKHERDMAVDKT 203
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +++KNL+ ++ E+ +R+ F + G I SV V + +D K S +GFV F E
Sbjct: 204 RFTNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDGK------SRCFGFVNFENAE 257
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIP 694
+A++ L LD + R+ + E E R V K G + ++N+
Sbjct: 258 DAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAKEAVDKSQGLNLYIKNLD 317
Query: 695 FQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+++ELF +G + K +R P SG+ +G GFV F EA RA+ +
Sbjct: 318 DSISDEKLKELFSPYGTITSCKVMRDP-----SGVSKGSGFVAFSNPEEASRALSEM 369
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+ N T+ + F + G + SV V R + S+GYG+V + +
Sbjct: 27 TSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQR-----SLGYGYVNYGNPQDA 81
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL+VL + L I + SNR+ T++R + I ++N+
Sbjct: 82 ARALEVLNFTPLHGKPIRIMYSNRD-----PTIRRSGN-------GNIFIKNLDKAIDHK 129
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ + SG +G+GFV++ ++ A++A++ L
Sbjct: 130 ALHDTFSAFGNILSCKV--AVDSSGQSKGYGFVQYDSEEAAQKAIEKL 175
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 153/390 (39%), Gaps = 94/390 (24%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG Y+ + + ++ +AL N + GK + I ++D + + SG
Sbjct: 68 LGYGYVNYGNPQDAARALEVLNFTPLHGKPIRIMYSNRDPTIRRSG-------------- 113
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
+G IF++NL + L F +G + + +D + +
Sbjct: 114 -------------------NGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDS-SGQ 153
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KG+ V + E A +A + L+G + + +++ P K ER +
Sbjct: 154 SKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGPFVRKH--------------ERDM- 198
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQA 496
V+ + VKNL TL +L+ +F FG IT + ++
Sbjct: 199 ----AVDKTRFTNVFVKNLSESTLEEELRKIFGEFG----------AITSVAVMKDEDGK 244
Query: 497 KAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEE 556
F + + ++ +E A G + K+ G+ ++K+E E E + + E +A+E
Sbjct: 245 SRCFGFVNFENAEDAARAVE-ALNGYKLDNKDWFVGRAQKKSEREME--LKHRFEQSAKE 301
Query: 557 --DNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVAR 614
D QG+ LYIKNL+ + +++ ++ F G I S V R
Sbjct: 302 AVDKSQGL-------------------NLYIKNLDDSISDEKLKELFSPYGTITSCKVMR 342
Query: 615 KKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
DP +S G GFV F E ++AL
Sbjct: 343 --DPSG----VSKGSGFVAFSNPEEASRAL 366
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 25/191 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV+NLS + E++L K+F ++G + V + + E K++ F V F E A +A + L
Sbjct: 208 VFVKNLSESTLEEELRKIFGEFGAITSVAV-MKDEDGKSRCFGFVNFENAEDAARAVEAL 266
Query: 399 DG------TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+G F+GR K++E ++ + R + + V+ + +
Sbjct: 267 NGYKLDNKDWFVGR-------AQKKSEREME------LKHRFEQSAKEAVDKSQGLNLYI 313
Query: 453 KNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTK 507
KNL LK LF P+G + +V+ P G+ +G V F +A A + +
Sbjct: 314 KNLDDSISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKM 373
Query: 508 FKEVPLYLEWA 518
PLY+ A
Sbjct: 374 VVSKPLYVALA 384
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 100/208 (48%), Gaps = 28/208 (13%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASV--------RTTFLGMAYIGFKDEK 269
V K ++ + VKNL +++L+ F + SV ++ G ++ F++ +
Sbjct: 200 VDKTRFTNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDGKSRCFG--FVNFENAE 257
Query: 270 NCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
+ +A+ + LN YK DN + G A + ME +K + +S +++V
Sbjct: 258 DAARAV---------EALNGYKL--DNKDWFVGRAQKKSEREME-LKHRFEQSAKEAV-- 303
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
D ++ ++++NL +++++ L +LF YG + + D + +KG V F PE
Sbjct: 304 --DKSQGLNLYIKNLDDSISDEKLKELFSPYGTITSCKVMRDP-SGVSKGSGFVAFSNPE 360
Query: 390 HATQAYQHLDGTVFLGRMLHLIPGKPKE 417
A++A ++G + + + L++ + KE
Sbjct: 361 EASRALSEMNGKMVVSKPLYVALAQRKE 388
>gi|282896133|ref|ZP_06304159.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281199051|gb|EFA73926.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 98
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NLSY VT+D LT +F +YG + V +P D+ET + +GFA V T A + L
Sbjct: 3 VYVGNLSYEVTQDALTAVFSEYGEVKRVQIPTDRETGRVRGFAFVEMNSEAQETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG ++GR L + KPKE
Sbjct: 63 DGAEWMGRDLKVNKAKPKE 81
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTE-GKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y++TQ+ L A F E G V VQ+ E G+ R FAF+ + E Q AA++ +
Sbjct: 10 YEVTQDALTAVFSEYGEVKRVQIPTDRETGRVRGFAFVEMNSEAQETAAIEALDGAEWMG 69
Query: 86 SRIKVEKC 93
+KV K
Sbjct: 70 RDLKVNKA 77
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+I NL++N E+ ++R F + G ++ V + ++ S G+G+V++ + +
Sbjct: 254 LFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRE-----SGRSRGFGYVEYTSAADAAK 308
Query: 643 ALKVLQNSSLDEHQIELK-RSNRNLESEATTVKRKSSNVAKQTGSK---ILVRNIPFQAK 698
A++ + + LD I L + R + + ++ + QT + + V N+PF A
Sbjct: 309 AMEAKKGTDLDGRTINLDYAAPRQANPQQDRTQDRARSYGDQTSPESDTLFVGNLPFSAT 368
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
+ + E+F A G + +RLP + +G +GFG+V+F + +EAK A AL L GR
Sbjct: 369 EDALHEVFGAHGSVLGIRLPTEQE-TGRPKGFGYVQFSSIDEAKAAHGAL-NGHELEGRA 426
Query: 759 LVLEWA 764
+ L+++
Sbjct: 427 VRLDFS 432
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +FV NL ++ TED L ++F +G + + LP ++ET + KGF V F + A A
Sbjct: 354 ESDTLFVGNLPFSATEDALHEVFGAHGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAA 413
Query: 395 YQHLDGTVFLGRMLHL 410
+ L+G GR + L
Sbjct: 414 HGALNGHELEGRAVRL 429
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 7/187 (3%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++ NL++N ED +RR F+ G I V ++ + G+G+V+F +
Sbjct: 250 LFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGR-----AKGFGYVEFAKAADAAK 304
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A K + LD + + S + +A K + + + + N+ F +
Sbjct: 305 AQKDMHEYELDGRPLNVDFSTPRQKPDANARANKFGDKRSAPSNTLFIGNLSFDCTNETI 364
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
+E+F +G + V LP SG +GFG+V+F ++ EA A++AL Q + GR L ++
Sbjct: 365 QEVFAEYGNVTRVSLPTDR-DSGALKGFGYVDFGSQEEATAALEAL-QGQDVAGRPLRVD 422
Query: 763 WAEEADN 769
+A D+
Sbjct: 423 FAAPRDD 429
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A S +F+ NLS+ T + + ++F +YG + V LP D+++ KGF V F E AT
Sbjct: 345 APSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATA 404
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKEN 418
A + L G GR L + P+++
Sbjct: 405 ALEALQGQDVAGRPLRVDFAAPRDD 429
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 23/198 (11%)
Query: 331 EDIAESG--RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP 388
E +AE G +FV NLS+ + ED L + FE +G + + D+ET + KGF V F
Sbjct: 240 EPVAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKA 299
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARS-- 446
A +A + + GR L++ P++ D N+ + RS
Sbjct: 300 ADAAKAQKDMHEYELDGRPLNVDFSTPRQKP---DANARA----------NKFGDKRSAP 346
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAF 500
+ + NL + ++ +F +G++ RV +P +G V+F + +A AA
Sbjct: 347 SNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAAL 406
Query: 501 NSLAYTKFKEVPLYLEWA 518
+L PL +++A
Sbjct: 407 EALQGQDVAGRPLRVDFA 424
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P TL+I NL+F+ T ++I+ F + G + V++ +D + G+G+V F ++E
Sbjct: 346 PSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGA-----LKGFGYVDFGSQE 400
Query: 639 SLNQALKVLQNSSL 652
AL+ LQ +
Sbjct: 401 EATAALEALQGQDV 414
>gi|317036295|ref|XP_001398046.2| C6 transcription factor [Aspergillus niger CBS 513.88]
Length = 1095
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 104/207 (50%), Gaps = 20/207 (9%)
Query: 562 VPEVEENVEEDEEREPEPDT---TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
P+ E+ VE R EP T T++I N+ ++ T + +++ +K G + V +
Sbjct: 888 APDAEKQVEARRRRLQEPPTPKETVFIGNVFYDVTREDLKKAMEKYGVVEKVVLVLDN-- 945
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSS 678
+ +S GYG+VQF + ++ +A+ L + ++ ++ + N+ R+
Sbjct: 946 ----RGISKGYGYVQFDSIDAAQRAVDALNMRLFEGRRVTVQFAQNNV------YHRRQL 995
Query: 679 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
N +T + + N+PF+ ++ ELFK + +R+ +G RGF EF++
Sbjct: 996 NAPTRT---LYIGNLPFEMTDRDLNELFKDVQNVVDIRVAVDR-RTGQARGFAHAEFVST 1051
Query: 739 NEAKRAMKALCQSTHLYGRRLVLEWAE 765
+ AK AM A+ ++ YGRRL L++++
Sbjct: 1052 SSAKAAM-AILENKLPYGRRLRLDYSK 1077
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 31/179 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F+ N+ Y VT +DL K EKYG + +V+L +D +KG+ V F + A +A L
Sbjct: 912 VFIGNVFYDVTREDLKKAMEKYGVVEKVVLVLDNR-GISKGYGYVQFDSIDAAQRAVDAL 970
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ +F GR + + + + NV R+L+A R + + NLP+
Sbjct: 971 NMRLFEGRRVTV-----QFAQNNV-------YHRRQLNA--------PTRTLYIGNLPFE 1010
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAF----NSLAYTK 507
DL LF+ ++ + V TG EF+ + AKAA N L Y +
Sbjct: 1011 MTDRDLNELFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAMAILENKLPYGR 1069
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDI--------AESGRIFVRNLSYTVTEDDLTKLF 357
D +++ + + ++ + +VQFA++ A + +++ NL + +T+ DL +LF
Sbjct: 961 DAAQRAVDALNMRLFEGRRVTVQFAQNNVYHRRQLNAPTRTLYIGNLPFEMTDRDLNELF 1020
Query: 358 EKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+ + ++ + +D+ T + +GFA F+ A A L+ + GR L L
Sbjct: 1021 KDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAMAILENKLPYGRRLRL 1073
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VTE+DL F +YG ++ V LP D+ET + +GFA V T A + L
Sbjct: 3 IYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG ++GR L + KP+E
Sbjct: 63 DGAEWMGRDLKVNKAKPRE 81
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTE-GKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y++T+E LK F E G V+ VQL E G+ R FAF+ E Q AA++ +
Sbjct: 10 YQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIEALDGAEWMG 69
Query: 86 SRIKVEKC 93
+KV K
Sbjct: 70 RDLKVNKA 77
>gi|124248380|gb|ABM92810.1| IP15810p [Drosophila melanogaster]
Length = 647
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 308 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 362
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 363 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 408
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFITKNEAKRAMKALCQS 751
QS++E LF +G++ R+ + +GL +G GF+ F + EA RA+K L +
Sbjct: 409 NMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT 468
Query: 752 T 752
T
Sbjct: 469 T 469
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IA SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 559 IASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 618
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A Q L+G R+L +
Sbjct: 619 VLAIQSLNGYTLGNRVLQV 637
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 315 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 374
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 375 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 409
Query: 459 TLPTDLKALFEPFGDL--GRVLV 479
+DL++LF P+G + R+L
Sbjct: 410 MTQSDLESLFSPYGKIITSRILC 432
>gi|344304706|gb|EGW34938.1| hypothetical protein SPAPADRAFT_58066 [Spathaspora passalidarum
NRRL Y-27907]
Length = 508
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 23/197 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T +Y+KN++ +++ + F G I S+ + + +D K S G+GFV + T ES
Sbjct: 108 TNIYVKNIDLEFSDEEFEKLFVPFGTITSIYLEKDQDGK------SKGFGFVNYETHESA 161
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLES--------EATTVKRKSSNVAKQTGSKILVRN 692
+A++ L + ++ +I + R+ + E E+T V+R ++K G + V+N
Sbjct: 162 VKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYESTRVER----LSKYQGVNLFVKN 217
Query: 693 IPFQAKQSEVEELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQS 751
+ ++EE FK FG + ++ MV +G +GFGFV F + EA +A+ + Q
Sbjct: 218 LDDSIDSEKLEEEFKPFGSITSAKV---MVDEAGKSKGFGFVCFSSPEEATKAITEMNQR 274
Query: 752 THLYGRRLVLEWAEEAD 768
L G+ L + A+ D
Sbjct: 275 MIL-GKPLYVALAQRKD 290
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 28/199 (14%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKDEKNC 271
K Y I VKN+ ++ + F +P ++ + +L G ++ ++ ++
Sbjct: 104 KANYTNIYVKNIDLEFSDEEFEKLF--VPFGTITSIYLEKDQDGKSKGFGFVNYETHESA 161
Query: 272 NKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE 331
KA+ + K++N K Y G A ME +K ++ ++ + + +
Sbjct: 162 VKAVEE----LNDKEINGQKI-------YVGRAQ-KKRERMEELKKQYESTRVERLSKYQ 209
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
+ +FV+NL ++ + L + F+ +G + + +D E K+KGF V F PE A
Sbjct: 210 GV----NLFVKNLDDSIDSEKLEEEFKPFGSITSAKVMVD-EAGKSKGFGFVCFSSPEEA 264
Query: 392 TQAYQHLDGTVFLGRMLHL 410
T+A ++ + LG+ L++
Sbjct: 265 TKAITEMNQRMILGKPLYV 283
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 87/207 (42%), Gaps = 13/207 (6%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
KH ++ +F E A I+V+N+ ++++ KLF +G + + L D++ K
Sbjct: 88 GKHISKKDRESKFEEMKANYTNIYVKNIDLEFSDEEFEKLFVPFGTITSIYLEKDQDG-K 146
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KGF V + E A +A + L+ G+ +++ + K K + +L
Sbjct: 147 SKGFGFVNYETHESAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYESTRVERLS 206
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFL 491
+ V + VKNL L+ F+PFG + +V+V G + G V F
Sbjct: 207 KYQGVN-------LFVKNLDDSIDSEKLEEEFKPFGSITSAKVMVDEAGKSKGFGFVCFS 259
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+A A + PLY+ A
Sbjct: 260 SPEEATKAITEMNQRMILGKPLYVALA 286
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
D ++IKNL+ ++ F G I S VA GQ S +GFV + T E+
Sbjct: 14 DGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATD----DMGQ--SKCFGFVHYETAEA 67
Query: 640 LNQALKVLQNSSLDEHQIELKR--SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
A++ + L++ ++ + + S ++ ES+ +K +N I V+NI +
Sbjct: 68 AEAAIENVNGMLLNDREVYVGKHISKKDRESKFEEMKANYTN--------IYVKNIDLEF 119
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
E E+LF FG + + L K G +GFGFV + T A +A++ L + G+
Sbjct: 120 SDEEFEKLFVPFGTITSIYLEKDQ--DGKSKGFGFVNYETHESAVKAVEEL-NDKEINGQ 176
Query: 758 RLVLEWAEEA-DNVEDIRKR 776
++ + A++ + +E+++K+
Sbjct: 177 KIYVGRAQKKRERMEELKKQ 196
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 9/184 (4%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++ N+++N ED +RR F+ G I V ++ + G+G+V+F +
Sbjct: 219 LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRE-----TGRAKGFGYVEFSNAADAAK 273
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT--GSKILVRNIPFQAKQS 700
A K + LD Q+ + S + +A R + K++ + + + N+ F+
Sbjct: 274 AQKEMHEYELDGRQLNVDFSTPRAKPDANGGARANKYGDKRSPPSNTLFLGNVSFECSNE 333
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
++E+F +G + V LP +G +GFG+V+F ++ EA A++AL + GR +
Sbjct: 334 SIQEVFAEYGSITRVSLPTDR-DTGALKGFGYVDFSSQQEATAALEAL-NGQDIGGRAIR 391
Query: 761 LEWA 764
+++A
Sbjct: 392 IDYA 395
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +F+ N+S+ + + + ++F +YG + V LP D++T KGF V F + AT A
Sbjct: 318 SNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAAL 377
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEG 420
+ L+G GR + + P+E+ G
Sbjct: 378 EALNGQDIGGRAIRIDYATPREDNG 402
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 177/427 (41%), Gaps = 85/427 (19%)
Query: 339 IFVRNLSYTVTEDDL-TKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
+FV NL ++L T L E +G + I +D T+ F V F E +A Q
Sbjct: 281 MFVGNLVSAKDFEELKTGLREFFG--KKNIEVLDVRISATRRFGYVDFSSAEDLDKALQ- 337
Query: 398 LDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
++G +G + L K KE + E K + R R + +KNLPY
Sbjct: 338 MNGKKLMGVEVKLEKAKSKE-----------TMKENKKE--------RDARTLFLKNLPY 378
Query: 458 RTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEW 517
R D++ +FE ++ R+++ G + +AY +FK
Sbjct: 379 RITEDDIREVFENALEV-RIVMNKDGNS---------------RGMAYVEFK-------- 414
Query: 518 APEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREP 577
EA+ +EK+ E EG + ++++NQ+G
Sbjct: 415 ------TEAEADKALEEKQGTEIEGRAVVIDFTGEKSQQENQKG---------------- 452
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
TTL + NL++ +TE++++ FKK +S+ V + Q GY FV F T
Sbjct: 453 -ESTTLIVNNLSYAATEETLQEVFKKA---SSIRVPQN------NQGRPKGYAFVDFATA 502
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
E +AL L N+ ++ I L+ S+ + + + T R Q + VR +
Sbjct: 503 EDAKEALNSLNNTEIEGRTIRLEFSSPSWQ-KGNTNARGGGGGFGQQSKTLFVRGLSEDT 561
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ + E F+ + V +G +GFGFV+F + +AK A +A+ + + G
Sbjct: 562 TEETLRESFEGSISARIVT----DRDTGSSKGFGFVDFSSPEDAKAAKEAM-EDGEIDGN 616
Query: 758 RLVLEWA 764
++ L++A
Sbjct: 617 KVTLDFA 623
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKI 688
+G+V F + E L++AL+ + L +++L+++ +S+ T + K A+ +
Sbjct: 321 FGYVDFSSAEDLDKALQ-MNGKKLMGVEVKLEKA----KSKETMKENKKERDART----L 371
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
++N+P++ + ++ E+F+ E++ V M G RG +VEF T+ EA +A++
Sbjct: 372 FLKNLPYRITEDDIREVFENALEVRIV-----MNKDGNSRGMAYVEFKTEAEADKALEE- 425
Query: 749 CQSTHLYGRRLVLEWAEEADNVED 772
Q T + GR +V+++ E E+
Sbjct: 426 KQGTEIEGRAVVIDFTGEKSQQEN 449
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
+S +FVR LS TE+ L + FE G ++ I+ D++T +KGF V F PE A A
Sbjct: 548 QSKTLFVRGLSEDTTEETLRESFE--GSISARIV-TDRDTGSSKGFGFVDFSSPEDAKAA 604
Query: 395 YQHLDGTVFLGRMLHLIPGKPK 416
+ ++ G + L KPK
Sbjct: 605 KEAMEDGEIDGNKVTLDFAKPK 626
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 165/420 (39%), Gaps = 83/420 (19%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V +L V+E L +LF + G + + + D T ++ G+A V + + AT+A
Sbjct: 27 STSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATRAL 86
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ L+ +V G + ++ H S RK N I +KNL
Sbjct: 87 ELLNFSVLNGNPIRIM-------------FSHRDPSIRKSGTAN----------IFIKNL 123
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYL 515
+T+ D KAL + F G +L + G Q+K + +F++
Sbjct: 124 D-KTI--DNKALHDTFSAFGGILSCKVAVDG------SGQSKG----YGFVQFEQ----- 165
Query: 516 EWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEER 575
EE EK D Q V E D+
Sbjct: 166 ------------------------EESALTAIEKVNGMLLNDKQVFVGPFVRRQERDQSG 201
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
+Y+KNL N+TED ++ F G I+S V R D K S +GFV F
Sbjct: 202 GVSKFNNVYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDSDGK------SKCFGFVNFE 255
Query: 636 TRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
++ +A++ L DE + + K+S R E A + + + K G + ++
Sbjct: 256 HPDNAAKAVEALNGKKRDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLK 315
Query: 692 NIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
N+ ++ ELF +G + K +R P+ G RG GFV F + EA RA+ +
Sbjct: 316 NLDDTVDDEKLRELFADYGTITSCKVMRDPQ-----GQSRGSGFVAFSSPEEATRAVTEM 370
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 155/422 (36%), Gaps = 106/422 (25%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG AY+ + ++ +AL N S G + I +D S + SG A+
Sbjct: 69 LGYAYVNYNSAQDATRALELLNFSVLNGNPIRIMFSHRDPSIRKSGTAN----------- 117
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
IF++NL T+ L F +G + + +D + +
Sbjct: 118 ----------------------IFIKNLDKTIDNKALHDTFSAFGGILSCKVAVDG-SGQ 154
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KG+ V F E A A + ++G + + + + P ++ G +
Sbjct: 155 SKGYGFVQFEQEESALTAIEKVNGMLLNDKQVFVGPFVRRQERDQSGG----------VS 204
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGITGLVEFL 491
FN V VKNL T DLK +F +G + +V G V F
Sbjct: 205 KFNNV---------YVKNLGENTTEDDLKNVFGAYGTISSAVVMRDSDGKSKCFGFVNFE 255
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGE---EGEEE 548
+ A A +L K E KE G+ ++K+E E E + E+E
Sbjct: 256 HPDNAAKAVEALNGKKRDE----------------KEWYVGRAQKKSEREAELRAKFEQE 299
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
+KE + QGV LY+KNL+ ++ +R F G I
Sbjct: 300 RKERI---EKYQGV-------------------NLYLKNLDDTVDDEKLRELFADYGTIT 337
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES 668
S V R DP+ GQ S G GFV F + E +A+ + + + + + R E
Sbjct: 338 SCKVMR--DPQ--GQ--SRGSGFVAFSSPEEATRAVTEMNGKMVGSKPLYVALAQRKEER 391
Query: 669 EA 670
A
Sbjct: 392 RA 393
>gi|365763380|gb|EHN04909.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 453
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 63/262 (24%)
Query: 526 AKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYI 585
A E + + EG E+ E+ E++ VP + E D LY+
Sbjct: 25 AVEAPASADPSSEQSVAVEGNSEQAEDNQGENDPSVVPA--NAITGGRETS---DRVLYV 79
Query: 586 KNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK 645
NL+ TED ++++F+ GPIA++ + K+ K ++ Y FV+++ N AL+
Sbjct: 80 GNLDKAITEDILKQYFQVGGPIANIKIMIDKNNK------NVNYAFVEYHQSHDANIALQ 133
Query: 646 VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEEL 705
L KQ + I+ N FQ++QS ++
Sbjct: 134 TLN--------------------------------GKQIENNIVKINWAFQSQQSSSDDT 161
Query: 706 FKAF-GELK-----------FVRLPKKMVG-------SGLHRGFGFVEFITKNEAKRAMK 746
F F G+L F P + G +G RG+GFV F ++++A+ AM
Sbjct: 162 FNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMD 221
Query: 747 ALCQSTHLYGRRLVLEWAEEAD 768
++ Q L GR L + WA + D
Sbjct: 222 SM-QGQDLNGRPLRINWAAKRD 242
>gi|170044495|ref|XP_001849881.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867621|gb|EDS31004.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 393
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 544 EGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK 603
+G+E+K++NT + D R T L + L TE+ IR F
Sbjct: 49 DGQEKKQQNTTAASS-----------GSDNAR-----TNLIVNYLPQTMTEEEIRSLFSS 92
Query: 604 CGPIASVTVARKKDPKSPGQ--FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKR 661
G + SV + R K+ PGQ S+GYGFV F+ + QA+ VL L+
Sbjct: 93 VGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNFHRSQDAEQAVNVLNG---------LRL 143
Query: 662 SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM 721
N+ L+ + R SS K G+ + + +P Q E+E +F+ +GE+ R+ +
Sbjct: 144 QNKVLK---VSFARPSSEGIK--GANLYISGLPKTITQEELEIIFRPYGEIITSRVLVQD 198
Query: 722 VGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
G+ +G GF+ F + EA+RA+ AL +T
Sbjct: 199 -GNDKPKGVGFIRFDQRKEAERAIAALNGTT 228
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 333 IAESG--RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
+A SG IF+ NL+ E+ L +LF +G + V + D T++ KG+ VT E
Sbjct: 306 VAPSGGWSIFIYNLAPETEENTLWQLFGPFGAVQNVKIIKDSATNQCKGYGFVTMTNYEE 365
Query: 391 ATQAYQHLDGTVFLGRMLHL 410
A A + L+G R+L +
Sbjct: 366 AMLAIRSLNGYTLGQRVLQV 385
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 28/211 (13%)
Query: 574 EREPEP-------------DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
E EPEP L+ NL++N E+ +R F++ G + + ++
Sbjct: 213 EEEPEPAAKKAKVNLPDGASANLFAGNLSWNVDEEWLRSEFEEFGELVGARIVTDRE--- 269
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNV 680
S G+G+V+F E +A +++ LD ++ L +N + +R S
Sbjct: 270 --SGRSRGFGYVEFANVEDAVKAHAAKKDAELDGRKLNLDFANARTNAGGNPRERADSR- 326
Query: 681 AKQTGSK-------ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
AK G + + + N+PF A ++ V+ELF G + +RLP SG +GFG+V
Sbjct: 327 AKSFGDQTSPESDTLFLGNLPFSADENAVQELFSKHGSILGIRLPTDP-DSGRPKGFGYV 385
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+F + +EA+ A++A L GR + ++++
Sbjct: 386 QFSSVDEARAALEAEY-GADLGGRAIRIDFS 415
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 13/174 (7%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +F NLS+ V E+ L FE++G L + D+E+ +++GF V F E A +A+
Sbjct: 232 SANLFAGNLSWNVDEEWLRSEFEEFGELVGARIVTDRESGRSRGFGYVEFANVEDAVKAH 291
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
GR L+L + N G G R +F S + L NL
Sbjct: 292 AAKKDAELDGRKLNLDFANARTNAG---GNPRERADSR-AKSFGDQTSPESDTLFL-GNL 346
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNS 502
P+ ++ LF G + + +P P G G V+F ++A+AA +
Sbjct: 347 PFSADENAVQELFSKHGSILGIRLPTDPDSGRPKGF-GYVQFSSVDEARAALEA 399
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +F+ NL ++ E+ + +LF K+G + + LP D ++ + KGF V F + A A
Sbjct: 337 ESDTLFLGNLPFSADENAVQELFSKHGSILGIRLPTDPDSGRPKGFGYVQFSSVDEARAA 396
Query: 395 YQHLDGTVFLGRMLHL 410
+ G GR + +
Sbjct: 397 LEAEYGADLGGRAIRI 412
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
++ PE DT L++ NL F++ E++++ F K G I + + P P G+G+V
Sbjct: 332 DQTSPESDT-LFLGNLPFSADENAVQELFSKHGSILGIRL-----PTDPDSGRPKGFGYV 385
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIEL 659
QF + + AL+ + L I +
Sbjct: 386 QFSSVDEARAALEAEYGADLGGRAIRI 412
>gi|94733636|emb|CAK04114.1| novel protein (zgc:56258) [Danio rerio]
Length = 865
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 31/239 (12%)
Query: 543 EEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFK 602
+ G+ E+ + + E N + +P + E + L I+NL+F +D +++ F
Sbjct: 95 DSGDTEESQKSGETKNTEEIPSPTKKKE---------NGWLIIRNLSFKCEDDELKQIFS 145
Query: 603 KCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS 662
K G + + K D K G+ FVQF +A + ++ + +E+ +
Sbjct: 146 KFGTVLETRIPLKPDGKKK------GFAFVQFKCVSEAEKARAAMNRKAIRDRPVEVDWT 199
Query: 663 NRNLES------------EATTVKRKSSNVAK-QTGSKILVRNIPFQAKQSEVEELFKAF 709
N ES E TT K + K + S++++RN+ F+ ++ +++++F F
Sbjct: 200 TSNTESADPEDTEEPHKAEETTSTEKFKGIRKIKLKSRLIIRNLSFKCEEDDLKQIFSEF 259
Query: 710 GELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
G + ++P K G RGF FV F EA +A+ A+ + R++ ++WA D
Sbjct: 260 GTVLEAKIPLK--PDGKKRGFAFVLFKRMPEAGKALTAM-NGKKIKDRQVAVDWAIAKD 315
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 18/196 (9%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E+G + +RNLS+ +D+L ++F K+G + E +P+ K K KGFA V F A +A
Sbjct: 122 ENGWLIIRNLSFKCEDDELKQIFSKFGTVLETRIPL-KPDGKKKGFAFVQFKCVSEAEKA 180
Query: 395 YQHLDGTVFLGRMLHLI-------PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSK 447
++ R + + P++ E + H + F + + + K
Sbjct: 181 RAAMNRKAIRDRPVEVDWTTSNTESADPEDTE-----EPHKAEETTSTEKFKGIRKIKLK 235
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP--PYGIT---GLVEFLQKNQAKAAFNS 502
++++NL ++ DLK +F FG + +P P G V F + +A A +
Sbjct: 236 SRLIIRNLSFKCEEDDLKQIFSEFGTVLEAKIPLKPDGKKRGFAFVLFKRMPEAGKALTA 295
Query: 503 LAYTKFKEVPLYLEWA 518
+ K K+ + ++WA
Sbjct: 296 MNGKKIKDRQVAVDWA 311
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 34/208 (16%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P TL+++ L ++ + + F + GP+ + V K+ K G+G+V F +
Sbjct: 2 PAVTLFVRRLPETASNEHLAEIFSEIGPLKNCFVVCDKEKK------CRGFGYVTFSMED 55
Query: 639 SLNQALKVLQNSSLDEHQIEL-------------------KRSNRNLESEATTVKRKSSN 679
+ALK ++ D+ +I + K S ES+ + + +
Sbjct: 56 DAQRALKEVK--LYDDQKIFVTVAKKKLDDKKRKKNAKTNKDSGDTEESQKSGETKNTEE 113
Query: 680 VAKQTGSK----ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
+ T K +++RN+ F+ + E++++F FG + R+P K G +GF FV+F
Sbjct: 114 IPSPTKKKENGWLIIRNLSFKCEDDELKQIFSKFGTVLETRIPLK--PDGKKKGFAFVQF 171
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEW 763
+EA++A A+ + + R + ++W
Sbjct: 172 KCVSEAEKARAAMNRKA-IRDRPVEVDW 198
>gi|67537390|ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|40741753|gb|EAA60943.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|259482272|tpe|CBF76595.1| TPA: nucleolin protein Nsr1, putative (AFU_orthologue;
AFUA_3G07710) [Aspergillus nidulans FGSC A4]
Length = 524
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 98/190 (51%), Gaps = 16/190 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++ NL++N TE+ + + F++ G +++ + + + S G+G+V+F +
Sbjct: 279 LFVGNLSWNVTEEWLHQEFEQFGELSARIMTERDTGR------SRGFGYVEFTNAADAAK 332
Query: 643 ALKVLQNSSLDEHQIELK-RSNRNLESEATTVKRKSSNVAKQTGSK-------ILVRNIP 694
A + ++ +D +I L + R + K ++ N A+ G + + V N+P
Sbjct: 333 AYEAMKEHEIDGRKINLDYATGRPANKDQGGFKERAQNRARSFGDQTSPESDTLFVGNLP 392
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
F A + V E+F G + +RLP M SG +GFG+V++ + +EA++A L Q +
Sbjct: 393 FSANEDSVHEVFGPQGNVLGIRLPTDME-SGRPKGFGYVQYSSVDEARKAYNEL-QGAEI 450
Query: 755 YGRRLVLEWA 764
GR + L+++
Sbjct: 451 DGRPIRLDFS 460
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 321 KSQEDSVQFAEDIA-ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKG 379
++Q + F + + ES +FV NL ++ ED + ++F G + + LP D E+ + KG
Sbjct: 367 RAQNRARSFGDQTSPESDTLFVGNLPFSANEDSVHEVFGPQGNVLGIRLPTDMESGRPKG 426
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
F V + + A +AY L G GR + L P+ N
Sbjct: 427 FGYVQYSSVDEARKAYNELQGAEIDGRPIRLDFSTPRAN 465
>gi|296804902|ref|XP_002843299.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
gi|238845901|gb|EEQ35563.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
Length = 1278
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 16/170 (9%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP DTT+++ N + E+ IR F CG IA V +F S+ Y + +
Sbjct: 871 EPVTDTTVFVTNFPPTADENYIRELFHSCGEIAEV------------RFPSLKYNTHRRF 918
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+ + L+E +L + R + + +R+ + A + G +I V N+P+
Sbjct: 919 CYVQFTSSSDAYAATGLNEK--DLGGNLRLVVKISDPSQRQVRSGAYEEGREIYVCNLPY 976
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ + ++ ELF A+G+++ VR+P K+ +G RGF FV F TK+++ A+
Sbjct: 977 KTTEGDLVELFTAYGDVESVRIPTKV--NGETRGFAFVTFATKDQSNAAL 1024
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 46/208 (22%)
Query: 335 ESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
E GR I+V NL Y TE DL +LF YG + V +P K +T+GFA VTF + +
Sbjct: 964 EEGREIYVCNLPYKTTEGDLVELFTAYGDVESVRIPT-KVNGETRGFAFVTFATKDQSNA 1022
Query: 394 AYQHLDGTVFLGRMLHLI-----------------------------PGKPKENEGNVDG 424
A ++ F GR L++ G P + G+V
Sbjct: 1023 ALA-MNEKTFKGRELNVRLSTNTGAKRHQTTVVSRSESPATNAQRNGTGTPSTSPGSVSN 1081
Query: 425 KVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGI 484
+ + +R+L R + + N+P ++AL EP+G L ++++ P
Sbjct: 1082 GQYKIMGDRRL------------RTVALMNIPDTVNDARIRALTEPYGALVKIILRPDHQ 1129
Query: 485 TGLVEFLQKNQAKAAFNSLAYTKFKEVP 512
+VEF + A A SLA ++ P
Sbjct: 1130 GAIVEFSDTHDAGKA--SLALEGYEITP 1155
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 53/216 (24%)
Query: 532 GKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFN 591
GK K NE E + G KK A+ D V VE V + E ++ +KNL +
Sbjct: 767 GKRKRGNEPE-QNGLTSKK---AKGD---AVQSVEAPVRDREH------ASVIVKNLPKD 813
Query: 592 STEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
+ IR+ F+ CG + + + P PG L ++F
Sbjct: 814 IPQVKIRQFFRDCGKLNCLQML----PGEPGSAL------LEF----------------- 846
Query: 652 LDEHQIELKRSNRN---LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKA 708
D H+ L +N LE TV+ T + + V N P A ++ + ELF +
Sbjct: 847 -DTHEDALAAGTKNQKFLEGNEVTVE-------PVTDTTVFVTNFPPTADENYIRELFHS 898
Query: 709 FGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
GE+ VR P + HR F +V+F + ++A A
Sbjct: 899 CGEIAEVRFPSLKYNT--HRRFCYVQFTSSSDAYAA 932
>gi|172438|gb|AAA02808.1| RNA-binding protein [Saccharomyces cerevisiae]
Length = 429
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 113/276 (40%), Gaps = 69/276 (25%)
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
P+ +E P V A A ++ E E+ E+ + EN P V
Sbjct: 17 PVAVE-TPSAVEAPASADPSSEQSVAVEGNSEQAEDNQGEND---------PSVVPANAI 66
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
RE D LY+ NL+ TED ++++F+ GPIA++ + K+ K ++ Y F
Sbjct: 67 TGGRETS-DRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNK------NVNYAF 119
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
V+++ N AL+ L KQ + I+
Sbjct: 120 VEYHQSHDANIALQTLN--------------------------------GKQIENNIVKI 147
Query: 692 NIPFQAKQSEVEELFKAF-GELK-----------FVRLPKKMVG-------SGLHRGFGF 732
N FQ++QS ++ F F G+L F P + G +G RG+GF
Sbjct: 148 NWAFQSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGF 207
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
V F ++++A+ AM ++ Q L GR L + WA + D
Sbjct: 208 VSFTSQDDAQNAMDSM-QGQDLNGRPLRINWAAKRD 242
>gi|363753804|ref|XP_003647118.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890754|gb|AET40301.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
Length = 580
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 165/419 (39%), Gaps = 91/419 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V L +V+E L +F G ++ + + D T+ + G+A V F E +A + L
Sbjct: 40 LYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGRKAIEQL 99
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T LI GKP C I + D + + I +KNL
Sbjct: 100 NYT--------LIKGKP------------CRIMWSQRDP---SLRKKGSGNIYIKNL--- 133
Query: 459 TLPTDLKALFEPFGDLGRVL-----VPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKE 510
D K+L E F G +L G++ G V F ++ A+ A ++ +
Sbjct: 134 HPAIDNKSLHETFSTFGNILSCKVATDDNGVSRGFGFVHFENESDARDAIEAVNGMLMND 193
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
+Y+ W + +++D Q + EV+
Sbjct: 194 QEVYVAW----------------------------------HVSKKDRQSKLEEVKAKF- 218
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
T +Y+KN++ ++++ + F K G I S + + + K G+G
Sbjct: 219 ----------TNIYVKNIDLETSQEEFEQLFSKYGKITSAVLEKDSEGK------LRGFG 262
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGS 686
F+ F + +A+ L S + + R+ + E + K+ + +AK G
Sbjct: 263 FINFEDHSTAARAVDELNESDFRGQTLYVGRAQKKHERQQELKKQYETARLEKLAKYQGV 322
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ ++N+ ++++ F FG + V++ K GS RGFGFV F T EA +A+
Sbjct: 323 NLFIKNLDDSIDDEKLKDEFAPFGTITSVKVMKDEAGSS--RGFGFVCFSTPEEATKAI 379
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+YIKNL+ S+ F G I S VA + +S G+GFV F
Sbjct: 128 IYIKNLHPAIDNKSLHETFSTFGNILSCKVATDDNG------VSRGFGFVHFENESDARD 181
Query: 643 ALKVLQNSSLDEHQIELK--RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
A++ + +++ ++ + S ++ +S+ VK K +N I V+NI + Q
Sbjct: 182 AIEAVNGMLMNDQEVYVAWHVSKKDRQSKLEEVKAKFTN--------IYVKNIDLETSQE 233
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
E E+LF +G++ L K G RGFGF+ F + A RA+ L +S
Sbjct: 234 EFEQLFSKYGKITSAVLEKD--SEGKLRGFGFINFEDHSTAARAVDELNES 282
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 182/479 (37%), Gaps = 122/479 (25%)
Query: 187 ADISD-----MEYLKLKTKSKDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDL 241
+D++D +E LK++ + TAP+ S+ P + ++ V L V + L
Sbjct: 2 SDVTDKTAEQLEQLKIEEQ---TAPTTTE----SETPKVETSGASLYVGELDPSVSEALL 54
Query: 242 KAYFKPL-PLASVRT-------TFLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKY 292
F P+ ++S+R T LG AY+ F D + KA+ + N + KGK I
Sbjct: 55 YDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGRKAIEQLNYTLIKGKPCRIMWS 114
Query: 293 SKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
+D S + G SG I+++NL +
Sbjct: 115 QRDPSLRKKG---------------------------------SGNIYIKNLHPAIDNKS 141
Query: 353 LTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIP 412
L + F +G + + D + ++GF V F A A + ++G +
Sbjct: 142 LHETFSTFGNILSCKVATD-DNGVSRGFGFVHFENESDARDAIEAVNGMLM--------- 191
Query: 413 GKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-ILVKNLPYRTLPTDLKALFEPF 471
D +V+ K D +++ E ++K I VKN+ T + + LF +
Sbjct: 192 ---------NDQEVYVAWHVSKKDRQSKLEEVKAKFTNIYVKNIDLETSQEEFEQLFSKY 242
Query: 472 GDLGRVLVPP------YGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAE 525
G + ++ G G + F + A A + L + F+ LY+ A
Sbjct: 243 GKITSAVLEKDSEGKLRGF-GFINFEDHSTAARAVDELNESDFRGQTLYVGRAQ------ 295
Query: 526 AKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYI 585
K+ E+ +E ++ E + E A+ QGV L+I
Sbjct: 296 -------KKHERQQELKKQYETARLEKLAK---YQGV-------------------NLFI 326
Query: 586 KNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
KNL+ + ++ ++ F G I SV V + + S G+GFV F T E +A+
Sbjct: 327 KNLDDSIDDEKLKDEFAPFGTITSVKVMKDEAGS------SRGFGFVCFSTPEEATKAI 379
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ L+ + +E + F G ++S+ V R + S+GY +V F+ E+
Sbjct: 38 ASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITNT-----SLGYAYVNFHDHEAG 92
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A++ L + + + S R+ ++++K S I ++N+
Sbjct: 93 RKAIEQLNYTLIKGKPCRIMWSQRD-----PSLRKKGSG-------NIYIKNLHPAIDNK 140
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ E F FG + ++ +G+ RGFGFV F +++A+ A++A+
Sbjct: 141 SLHETFSTFGNILSCKVATD--DNGVSRGFGFVHFENESDARDAIEAV 186
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 111/279 (39%), Gaps = 62/279 (22%)
Query: 259 GMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G +I F+D +A+++ N+S ++G+ L Y G A +
Sbjct: 260 GFGFINFEDHSTAARAVDELNESDFRGQTL------------YVGRA-----------QK 296
Query: 318 KHWKSQEDSVQF----AEDIA--ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPID 371
KH + QE Q+ E +A + +F++NL ++ ++ L F +G + V + D
Sbjct: 297 KHERQQELKKQYETARLEKLAKYQGVNLFIKNLDDSIDDEKLKDEFAPFGTITSVKVMKD 356
Query: 372 KETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCIS 431
E ++GF V F PE AT+A + L+ GKP ++ I+
Sbjct: 357 -EAGSSRGFGFVCFSTPEEATKAITE--------KNQQLVAGKP----------LYVAIA 397
Query: 432 ERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY---GITGLV 488
+RK NQ+ + R + R + A G G+ + PP GI V
Sbjct: 398 QRKEVRRNQLAQQIQARNQM------RFQHANAAAAAAVAGLPGQFIPPPMYYGGIPPRV 451
Query: 489 EFLQKNQAKAAF---NSLAYTKF-KEVPLYLEWAPEGVF 523
F N ++ +F + P+Y + P+G F
Sbjct: 452 PFQGPNPQMTGMPKNGAIPPQQFGRPGPMYGGFGPQGQF 490
>gi|358387438|gb|EHK25033.1| hypothetical protein TRIVIDRAFT_54648 [Trichoderma virens Gv29-8]
Length = 1024
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 120/291 (41%), Gaps = 54/291 (18%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVR------TTFLGMAYIGFKDEKNCNKALNKN 278
TI V N P +K ++ FK + S+R T Y+ F+D + +A+ K
Sbjct: 668 TIYVTNYPPAADEKYIRRLFKDCGDILSIRWPSLKVNTHRRFCYVSFRDSEASARAVAKE 727
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
+ + K + KYS N K S+E +V AE
Sbjct: 728 GTILEDKYKLLAKYSDPNRKK----------------------SREGAV------AEGRE 759
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V LS + TED++ ++F KYG ++ + +P + + K +GFA V F + A +A L
Sbjct: 760 VHVSGLSPSATEDEIREIFSKYGTISRINVPRNI-SGKGRGFAFVDFATKDEAEKAASEL 818
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T FL ++LH+ K NV H + R I + LP
Sbjct: 819 NKTKFLNQILHVEISKA----SNVKPTAHTA--------------DIAARTIALMGLPDT 860
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFK 509
++AL EPFG + ++++ P +EF + A L+ +F+
Sbjct: 861 INDARVRALVEPFGPIVKLVLQPGHGGAKIEFADSSATGKASLQLSNVEFE 911
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
D T+Y+ N + E IRR FK CG I S+ + P ++ F R+S
Sbjct: 666 DLTIYVTNYPPAADEKYIRRLFKDCGDILSI--------RWPSLKVNTHRRFCYVSFRDS 717
Query: 640 LNQALKVLQNSSL--DEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
A V + ++ D++++ K S+ N ++KS A G ++ V + A
Sbjct: 718 EASARAVAKEGTILEDKYKLLAKYSDPN--------RKKSREGAVAEGREVHVSGLSPSA 769
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
+ E+ E+F +G + + +P+ + G G RGF FV+F TK+EA++A L ++ L
Sbjct: 770 TEDEIREIFSKYGTISRINVPRNISGKG--RGFAFVDFATKDEAEKAASELNKTKFL 824
>gi|338722679|ref|XP_001915947.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 4-like [Equus caballus]
Length = 397
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 167/434 (38%), Gaps = 101/434 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTED L K F GP+ + + D T ++ G+A V FL A +A +
Sbjct: 12 LYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDTM 71
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI--ILVKNLP 456
+ G+ + L+ S+R DA+ R I + +KNL
Sbjct: 72 NFDTIKGKSIRLMW------------------SQR--DAY-----LRKSGIGNVFIKNLD 106
Query: 457 YRTLPTDLKALFEPFGDLGRVLVPPY-----GITG--LVEFLQKNQAKAAFNSLAYTKFK 509
D K L+E F G++L G G V F + A A + K
Sbjct: 107 K---SIDNKTLYEHFSAFGKILSSKVMSDDQGSRGYAFVHFQNQMAADRAIEEMNGALLK 163
Query: 510 EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
+ L++ G+ K + + E E +N A E
Sbjct: 164 DCRLFV----------------GRFKNRQDREAE------LQNKANEF------------ 189
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
T +YIKN + + + F K G SV V KS G +
Sbjct: 190 -----------TNIYIKNFGDDMDDKRLEEVFSKYGKTVSVKVMTDSTGKSKG------F 232
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV----KRKSSNVAKQTG 685
GFV FY+ E+ +A++ + ++ + + R+ + E +A ++K + G
Sbjct: 233 GFVSFYSHEAAQKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQQKQERFRRCQG 292
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
K+ ++N+ ++ F +FG + V++ K+ G +GFG + F + EA RAM
Sbjct: 293 VKLYIKNLDDTIDDEKLRREFSSFGSISRVKVMKE---EGRSKGFGLICFSSPEEATRAM 349
Query: 746 KALCQSTHLYGRRL 759
T + GR L
Sbjct: 350 ------TEMNGRIL 357
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 24/183 (13%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L+ + TED + + F GP+ S+ + R + S+GY +V F
Sbjct: 10 ASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRR-----SLGYAYVNFLQLADA 64
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL + ++ I L S R+ + + K + ++N+
Sbjct: 65 QKALDTMNFDTIKGKSIRLMWSQRD------------AYLRKSGIGNVFIKNLDKSIDNK 112
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK----ALCQSTHLYG 756
+ E F AFG++ ++ GS RG+ FV F + A RA++ AL + L+
Sbjct: 113 TLYEHFSAFGKILSSKVMSDDQGS---RGYAFVHFQNQMAADRAIEEMNGALLKDCRLFV 169
Query: 757 RRL 759
R
Sbjct: 170 GRF 172
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
+++++NL T+ ++ L + F +G ++ V + KE ++KGF L+ F PE AT+A
Sbjct: 294 KLYIKNLDDTIDDEKLRREFSSFGSISRV--KVMKEEGRSKGFGLICFSSPEEATRAMTE 351
Query: 398 LDGTVFLGRMLHL 410
++G + + L++
Sbjct: 352 MNGRILGSKPLNI 364
>gi|427731365|ref|YP_007077602.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427367284|gb|AFY50005.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 100
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NLSY VTED L +F +YG + V LP D+ET + +GF V T A + L
Sbjct: 3 VYVGNLSYDVTEDSLNAVFAEYGSVKRVQLPTDRETGRVRGFGFVEMSSDAEETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KPKE+
Sbjct: 63 DGAEWMGRDLKVNKAKPKED 82
>gi|195342135|ref|XP_002037657.1| GM18380 [Drosophila sechellia]
gi|194132507|gb|EDW54075.1| GM18380 [Drosophila sechellia]
Length = 650
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 311 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 365
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 366 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 411
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFITKNEAKRAMKALCQS 751
QS++E LF +G++ R+ + +GL +G GF+ F + EA RA+K L +
Sbjct: 412 NMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT 471
Query: 752 T 752
T
Sbjct: 472 T 472
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IA SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 562 IASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 621
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A Q L+G R+L +
Sbjct: 622 VLAIQSLNGYTLGNRVLQV 640
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 318 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 377
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 378 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 412
Query: 459 TLPTDLKALFEPFGDL--GRVLV 479
+DL++LF P+G + R+L
Sbjct: 413 MTQSDLESLFSPYGKIITSRILC 435
>gi|358380041|gb|EHK17720.1| hypothetical protein TRIVIDRAFT_42809 [Trichoderma virens Gv29-8]
Length = 746
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 556 EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARK 615
+D G+ + + D+ R ++++++L N+T +S+ F + P+ TV
Sbjct: 24 QDPDGGISRTPKKAKTDDRR------SIFVRSLPPNATNESLADFFSQYFPVKHATVVID 77
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS---NRNLE---SE 669
+ K S G+GFV F + A + L D +I ++ + +RN + E
Sbjct: 78 QKTKE-----SRGFGFVSFADADDAKDAKEALDKKEWDGRRIRIEVAEPRHRNADPDSEE 132
Query: 670 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHR 728
A + + +K+++RN+P+ K SE + +LF +FG++KF LP+ G +
Sbjct: 133 AGKTPGRGRQAYQPPPTKLIIRNLPWSIKTSEQLSKLFISFGKVKFADLPQN---KGKLK 189
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
GFGFV + A++A++A+ + GR L ++WA
Sbjct: 190 GFGFVTLRGRPNAEKALEAINGKV-VDGRTLAVDWA 224
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 10/223 (4%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IFVR+L T + L F +Y P+ + ID++T +++GF V+F + A A + L
Sbjct: 45 IFVRSLPPNATNESLADFFSQYFPVKHATVVIDQKTKESRGFGFVSFADADDAKDAKEAL 104
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
D + GR + + +P+ + D + R A+ ++++NLP+
Sbjct: 105 DKKEWDGRRIRIEVAEPRHRNADPDSEEAGKTPGRGRQAYQPPPTK-----LIIRNLPWS 159
Query: 459 TLPTD-LKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
++ L LF FG + +P G V + A+ A ++ L
Sbjct: 160 IKTSEQLSKLFISFGKVKFADLPQNKGKLKGFGFVTLRGRPNAEKALEAINGKVVDGRTL 219
Query: 514 YLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEE 556
++WA + + ++ + G +KE + E E+ + E KE A +
Sbjct: 220 AVDWAVDKETWDKQQTTDGDDKEAKDAEDEDDKAEDKEAGAND 262
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
S +FVRNL +T T++ L+ F +G + + IDK T+K G V F+
Sbjct: 333 SATVFVRNLPFTTTDEQLSSFFGHFGKVRYARVVIDKATEKPAGTGFVCFV 383
>gi|7322081|gb|AAB25519.2| RRM9 [Drosophila melanogaster]
Length = 444
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 105 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 159
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 160 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 205
Query: 696 QAKQSEVEELFKAFGELKFVR-LPKKMVG---SGLHRGFGFVEFITKNEAKRAMKALCQS 751
QS++E LF +G++ R L + G +GL +G GF+ F + EA RA+K L +
Sbjct: 206 NMTQSDLESLFSPYGKIITSRILCDNITGEHAAGLSKGVGFIRFDQRFEADRAIKELNGT 265
Query: 752 T 752
T
Sbjct: 266 T 266
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IA SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 356 IASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 415
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A Q L+G R+L +
Sbjct: 416 VLAIQSLNGYTLGNRVLQV 434
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 112 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 171
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 172 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 206
Query: 459 TLPTDLKALFEPFGDL--GRVLV 479
+DL++LF P+G + R+L
Sbjct: 207 MTQSDLESLFSPYGKIITSRILC 229
>gi|157118056|ref|XP_001658986.1| hypothetical protein AaeL_AAEL008164 [Aedes aegypti]
gi|108875838|gb|EAT40063.1| AAEL008164-PA [Aedes aegypti]
Length = 363
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 17/174 (9%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ--FLSMGYGFVQFYTRE 638
T L + L TE+ IR F G + SV + R K+ PGQ S+GYGFV F+ +
Sbjct: 34 TNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNFHRSQ 93
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
QA+ VL L+ N+ L+ + R SS K G+ + + +P
Sbjct: 94 DAEQAVNVLNG---------LRLQNKVLK---VSFARPSSEGIK--GANLYISGLPKTIT 139
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
Q E+E +F+ +GE+ R+ + G+ +G GF+ F + EA+RA+ AL +T
Sbjct: 140 QEELETIFRPYGEIITSRVLVQE-GNDKPKGVGFIRFDQRKEAERAIAALNGTT 192
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 333 IAESG--RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
IA SG IF+ NL+ E+ L +LF +G + V + D T++ KG+ VT E
Sbjct: 270 IAPSGGWSIFIYNLAPETEENTLWQLFGPFGAVQNVKVIKDSATNQCKGYGFVTMTNYEE 329
Query: 391 ATQAYQHLDGTVFLGRMLHL 410
A A + L+G R+L +
Sbjct: 330 AMLAIRSLNGYTLGQRVLQV 349
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 44/210 (20%)
Query: 310 ASMENIKAKHWKSQEDSVQFAEDIAESGR--IFVRNLSYTVTEDDLTKLFEKYGPLAEVI 367
A++++++ ++ +SQ + A +E+ R + V L T+TE+++ LF G + V
Sbjct: 7 AAVQDLQKQNGESQNTAA--AASGSETARTNLIVNYLPQTMTEEEIRSLFSSVGEVESVK 64
Query: 368 LPIDKET-------DKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
L DK ++ G+ V F + A QA L+G ++L + +P
Sbjct: 65 LVRDKNVIYPGQPKGQSLGYGFVNFHRSQDAEQAVNVLNGLRLQNKVLKVSFARP----- 119
Query: 421 NVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVL 478
S + N + + LP +L+ +F P+G++ RVL
Sbjct: 120 ----------SSEGIKGAN----------LYISGLPKTITQEELETIFRPYGEIITSRVL 159
Query: 479 VP-----PYGITGLVEFLQKNQAKAAFNSL 503
V P G+ G + F Q+ +A+ A +L
Sbjct: 160 VQEGNDKPKGV-GFIRFDQRKEAERAIAAL 188
>gi|6324312|ref|NP_014382.1| Pub1p [Saccharomyces cerevisiae S288c]
gi|308153665|sp|P32588.4|PUB1_YEAST RecName: Full=Nuclear and cytoplasmic polyadenylated RNA-binding
protein PUB1; AltName: Full=ARS consensus-binding
protein ACBP-60; AltName: Full=Poly uridylate-binding
protein; Short=Poly(U)-binding protein
gi|1301841|emb|CAA95877.1| PUB1 [Saccharomyces cerevisiae]
gi|285814634|tpg|DAA10528.1| TPA: Pub1p [Saccharomyces cerevisiae S288c]
gi|392296972|gb|EIW08073.1| Pub1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 453
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 113/276 (40%), Gaps = 69/276 (25%)
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
P+ +E P V A A ++ E E+ E+ + EN P V
Sbjct: 17 PVAVE-TPSAVEAPASADPSSEQSVAVEGNSEQAEDNQGEND---------PSVVPANAI 66
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
RE D LY+ NL+ TED ++++F+ GPIA++ + K+ K ++ Y F
Sbjct: 67 TGGRETS-DRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNK------NVNYAF 119
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
V+++ N AL+ L KQ + I+
Sbjct: 120 VEYHQSHDANIALQTLN--------------------------------GKQIENNIVKI 147
Query: 692 NIPFQAKQSEVEELFKAF-GELK-----------FVRLPKKMVG-------SGLHRGFGF 732
N FQ++QS ++ F F G+L F P + G +G RG+GF
Sbjct: 148 NWAFQSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGF 207
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
V F ++++A+ AM ++ Q L GR L + WA + D
Sbjct: 208 VSFTSQDDAQNAMDSM-QGQDLNGRPLRINWAAKRD 242
>gi|295646|gb|AAC37348.1| RNA-binding protein [Saccharomyces cerevisiae]
gi|311124|gb|AAC37364.1| poly(A)-binding protein [Saccharomyces cerevisiae]
gi|151944515|gb|EDN62793.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|190409011|gb|EDV12276.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207341619|gb|EDZ69624.1| YNL016Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274171|gb|EEU09080.1| Pub1p [Saccharomyces cerevisiae JAY291]
gi|259148933|emb|CAY82177.1| Pub1p [Saccharomyces cerevisiae EC1118]
gi|323346726|gb|EGA81007.1| Pub1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352444|gb|EGA84945.1| Pub1p [Saccharomyces cerevisiae VL3]
Length = 453
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 113/276 (40%), Gaps = 69/276 (25%)
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
P+ +E P V A A ++ E E+ E+ + EN P V
Sbjct: 17 PVAVE-TPSAVEAPASADPSSEQSVAVEGNSEQAEDNQGEND---------PSVVPANAI 66
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
RE D LY+ NL+ TED ++++F+ GPIA++ + K+ K ++ Y F
Sbjct: 67 TGGRETS-DRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNK------NVNYAF 119
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
V+++ N AL+ L KQ + I+
Sbjct: 120 VEYHQSHDANIALQTLN--------------------------------GKQIENNIVKI 147
Query: 692 NIPFQAKQSEVEELFKAF-GELK-----------FVRLPKKMVG-------SGLHRGFGF 732
N FQ++QS ++ F F G+L F P + G +G RG+GF
Sbjct: 148 NWAFQSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGF 207
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
V F ++++A+ AM ++ Q L GR L + WA + D
Sbjct: 208 VSFTSQDDAQNAMDSM-QGQDLNGRPLRINWAAKRD 242
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 112/227 (49%), Gaps = 24/227 (10%)
Query: 559 QQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDP 618
++ P ++ V+E EP TL++ L+++ ++ ++R F+ P+ V AR
Sbjct: 220 EEAAPAKKQKVDE------EP-ATLFVGRLSWSIDDEWLKREFE---PLGGVISARVIFE 269
Query: 619 KSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSS 678
++ G+ S GYG+V F ++ + +ALK Q +D I L S + ++S
Sbjct: 270 RATGK--SRGYGYVDFDSKSAAEKALKEYQGREIDGRPINLDMSTGKPHASNNRSNDRAS 327
Query: 679 ---NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
+ + + N+ F A + + E+F +G + VR+P + +GFG+V++
Sbjct: 328 KFGDTPSAPSDTLFLGNLSFNANRDNLSEVFSEYGSIVSVRIP-THPDTEQPKGFGYVQY 386
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRYFG 782
+ +EAK A++AL ++ GR + L+++ DN +NR FG
Sbjct: 387 GSVDEAKAALEAL-NGEYIEGRPVRLDFSAPRDN-------SNRSFG 425
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 217 APVHKRQYH----TIVVKNLPAGVKKKDLKAYFKPLP-LASVRTTF-------LGMAYIG 264
AP K++ T+ V L + + LK F+PL + S R F G Y+
Sbjct: 223 APAKKQKVDEEPATLFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSRGYGYVD 282
Query: 265 FKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQE 324
F + KAL + ++G++++ + D S +G +NN +S +
Sbjct: 283 FDSKSAAEKALKE----YQGREIDGRPINLDMS---TGKPHASNN-----------RSND 324
Query: 325 DSVQFAED-IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
+ +F + A S +F+ NLS+ D+L+++F +YG + V +P +T++ KGF V
Sbjct: 325 RASKFGDTPSAPSDTLFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHPDTEQPKGFGYV 384
Query: 384 TFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
+ + A A + L+G GR + L P++N
Sbjct: 385 QYGSVDEAKAALEALNGEYIEGRPVRLDFSAPRDN 419
>gi|323303187|gb|EGA56986.1| Pub1p [Saccharomyces cerevisiae FostersB]
Length = 433
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 113/276 (40%), Gaps = 69/276 (25%)
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
P+ +E P V A A ++ E E+ E+ + EN P V
Sbjct: 18 PVAVE-TPSAVEAPASADPSSEQSVAVEGNSEQAEDNQGEND---------PSVVPANAI 67
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
RE D LY+ NL+ TED ++++F+ GPIA++ + K+ K ++ Y F
Sbjct: 68 TGGRETS-DRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNK------NVNYAF 120
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
V+++ N AL+ L KQ + I+
Sbjct: 121 VEYHQSHDANIALQTLN--------------------------------GKQIENNIVKI 148
Query: 692 NIPFQAKQSEVEELFKAF-GELK-----------FVRLPKKMVG-------SGLHRGFGF 732
N FQ++QS ++ F F G+L F P + G +G RG+GF
Sbjct: 149 NWAFQSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGF 208
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
V F ++++A+ AM ++ Q L GR L + WA + D
Sbjct: 209 VSFTSQDDAQNAMDSM-QGQDLNGRPLRINWAAKRD 243
>gi|294659673|ref|XP_002770625.1| DEHA2G12474p [Debaryomyces hansenii CBS767]
gi|218511736|sp|Q6BI95.2|PABP_DEBHA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|199434145|emb|CAR65959.1| DEHA2G12474p [Debaryomyces hansenii CBS767]
Length = 627
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 17/194 (8%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T +Y KN++ + +E+ ++ F+ G I S+ + + + KS G+GFV F ES
Sbjct: 232 TNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKS------KGFGFVNFENHESA 285
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN-----VAKQTGSKILVRNIPF 695
+A+ L + ++ +I + R+ + E +K++ N ++K G + ++N+
Sbjct: 286 VKAVDELNDKEINGQKIYVGRAQKKRE-RLEELKKQYENTRLEKLSKYQGVNLFIKNLDD 344
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
++EE FK FG + R+ MV +G +GFGFV F + EA +A+ + Q +
Sbjct: 345 TIDSEKLEEEFKPFGSITSARV---MVDETGKSKGFGFVCFSSPEEATKAITEMNQRM-I 400
Query: 755 YGRRLVLEWAEEAD 768
YG+ L + A+ D
Sbjct: 401 YGKPLYVALAQRKD 414
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 19/210 (9%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
KH ++ +F E A ++ +N+ +E++ KLFE YG + + L D E K
Sbjct: 212 GKHISKKDRESKFEEMKANFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEG-K 270
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KGF V F E A +A L+ G+ +++ + K + E K
Sbjct: 271 SKGFGFVNFENHESAVKAVDELNDKEINGQKIYVGRAQKKRER----------LEELKKQ 320
Query: 437 AFNQVVEARSKRI---ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLV 488
N +E SK + +KNL L+ F+PFG + RV+V G + G V
Sbjct: 321 YENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGSITSARVMVDETGKSKGFGFV 380
Query: 489 EFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
F +A A + PLY+ A
Sbjct: 381 CFSSPEEATKAITEMNQRMIYGKPLYVALA 410
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F++NL T+ + L + F+ +G + + +D ET K+KGF V F PE AT+A +
Sbjct: 337 LFIKNLDDTIDSEKLEEEFKPFGSITSARVMVD-ETGKSKGFGFVCFSSPEEATKAITEM 395
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ + G+ L++ + K+ V E+++ A NQ+ R + +P +
Sbjct: 396 NQRMIYGKPLYVALAQRKD--------VRRSQLEQQIQARNQM---RMQNAAATGGIPGQ 444
Query: 459 TLP 461
+P
Sbjct: 445 FIP 447
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 21/183 (11%)
Query: 553 TAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTV 612
+ EE Q E EE D + + +LY+ LN + E + F G +AS+ V
Sbjct: 25 STEETEQTASGETEEAA--DSAQVSDTSASLYVGELNPSVNEALLFEIFSPIGQVASIRV 82
Query: 613 ARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
R K S+GY +V F+ E +A++ L S ++ + S R+ +
Sbjct: 83 CRDAVTKK-----SLGYAYVNFHKFEDGEKAIEDLNYSLIEGRPCRIMWSQRD-----PS 132
Query: 673 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 732
++R I ++N+ + + F AFG++ ++ + G+ + FGF
Sbjct: 133 LRRNGD-------GNIFIKNLHPAIDNKALHDTFTAFGKILSCKVATDDM--GISKCFGF 183
Query: 733 VEF 735
V +
Sbjct: 184 VHY 186
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
D ++IKNL+ ++ F G I S VA + +S +GFV + T E+
Sbjct: 138 DGNIFIKNLHPAIDNKALHDTFTAFGKILSCKVA------TDDMGISKCFGFVHYETAEA 191
Query: 640 LNQALKVLQNSSLDEHQIELKR--SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
A++ + L++ ++ + + S ++ ES+ +K +NV +NI
Sbjct: 192 AEAAIENVNGMLLNDREVYVGKHISKKDRESKFEEMKANFTNV--------YAKNIDLDF 243
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ E ++LF+A+G++ + L K G +GFGFV F A +A+ L + G+
Sbjct: 244 SEEEFKKLFEAYGKITSIYLEKDH--EGKSKGFGFVNFENHESAVKAVDEL-NDKEINGQ 300
Query: 758 RLVLEWAEEA-DNVEDIRKR 776
++ + A++ + +E+++K+
Sbjct: 301 KIYVGRAQKKRERLEELKKQ 320
>gi|282898657|ref|ZP_06306645.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281196525|gb|EFA71434.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 96
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I++ NLSY TE DL +F YG + V+LP D+ET K +GFA V A L
Sbjct: 3 IYIGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGKMRGFAFVEMNEDAQEDAAISEL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG ++GR L + KPKE
Sbjct: 63 DGAEWMGRQLRVNKAKPKE 81
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 16/191 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++ NL++N E+ +R+ F+ G ++ V + +D S G+G+V++ + +
Sbjct: 288 LFVGNLSWNVDEEWLRQEFETFGELSGVRIVTDRD-----SGRSRGFGYVEYVSAADAAK 342
Query: 643 ALKVLQNSSLDEHQIELKRSN---------RNLESEATTVKRKSSNVAKQTGSKILVRNI 693
A +++ +D +I L + N + A R + A + V NI
Sbjct: 343 AYNAKKDTEIDGRKINLDYATGRPANNNNNNNNQDRAQARARNFGDQASPESDTLFVGNI 402
Query: 694 PFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTH 753
PF A + V ELF G + +RLP SG +GFG+V+F + +EA++A L
Sbjct: 403 PFSANEDSVSELFGQSGTIVGIRLPTDPE-SGRPKGFGYVQFSSVDEARQAFNDL-NGAE 460
Query: 754 LYGRRLVLEWA 764
L GR + L+++
Sbjct: 461 LNGRPVRLDFS 471
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +FV N+ ++ ED +++LF + G + + LP D E+ + KGF V F + A QA
Sbjct: 393 ESDTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQA 452
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNV 422
+ L+G GR + L P+ + G+
Sbjct: 453 FNDLNGAELNGRPVRLDFSTPRPSNGDA 480
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +FV NLS+ V E+ L + FE +G L+ V + D+++ +++GF V ++ A +AY
Sbjct: 285 SANLFVGNLSWNVDEEWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADAAKAY 344
Query: 396 QHLDGTVFLGRMLHL--IPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
T GR ++L G+P N N + + R F S + V
Sbjct: 345 NAKKDTEIDGRKINLDYATGRPANNNNNNNNQDRAQARARN---FGDQASPESD-TLFVG 400
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAYT 506
N+P+ + LF G + + +P P G G V+F ++A+ AFN L
Sbjct: 401 NIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGF-GYVQFSSVDEARQAFNDLNGA 459
Query: 507 KFKEVPLYLEWA 518
+ P+ L+++
Sbjct: 460 ELNGRPVRLDFS 471
>gi|349580919|dbj|GAA26078.1| K7_Pub1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 453
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 113/276 (40%), Gaps = 69/276 (25%)
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
P+ +E P V A A ++ E E+ E+ + EN P V
Sbjct: 17 PVAVE-TPSAVEAPASADPSSEQSVAVEGNSEQAEDNQGEND---------PSVVPANAI 66
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
RE D LY+ NL+ TED ++++F+ GPIA++ + K+ K ++ Y F
Sbjct: 67 TGGRETS-DRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNK------NVNYAF 119
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
V+++ N AL+ L KQ + I+
Sbjct: 120 VEYHQSHDANIALQTLN--------------------------------GKQIENNIVKI 147
Query: 692 NIPFQAKQSEVEELFKAF-GELK-----------FVRLPKKMVG-------SGLHRGFGF 732
N FQ++QS ++ F F G+L F P + G +G RG+GF
Sbjct: 148 NWAFQSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGF 207
Query: 733 VEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
V F ++++A+ AM ++ Q L GR L + WA + D
Sbjct: 208 VSFTSQDDAQNAMDSM-QGQDLNGRPLRINWAAKRD 242
>gi|291391164|ref|XP_002712117.1| PREDICTED: RNA binding motif protein 28 isoform 2 [Oryctolagus
cuniculus]
Length = 755
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++ L ++ + + F + GP+ V +K KS G+G+V F E +
Sbjct: 5 TLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKS-----CRGFGYVTFSMPEDVQ 59
Query: 642 QALKVLQNSSLDEHQIEL-------------KRSNRNLESEATTVKRKSSNVAKQTGSKI 688
+ALK + ++ + H+I + K N N E+ +K K VA + +++
Sbjct: 60 RALKEI--TTFEGHKINVTIAKKKLRAKSKEKGKNENSETLKKELKSKKPKVADKK-ARL 116
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
++RN+ F+ + +++ +F FG + V +PKK G RGF FV+F EA +A+K +
Sbjct: 117 IIRNLSFKCSEDDLKTIFAQFGAVLEVNVPKKP--DGKMRGFAFVQFKNLLEAGKALKGM 174
Query: 749 CQSTHLYGRRLVLEWAEEADNVEDIR 774
+ GR + ++WA D +D +
Sbjct: 175 -NMKEIKGRTVAVDWAVAKDKYKDTQ 199
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV L + + L +LF + GP+ + + +K + +GF VTF MPE +A + +
Sbjct: 6 LFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKSCRGFGYVTFSMPEDVQRALKEI 65
Query: 399 DGTVFLGRMLHLIPGKPK-ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
T F G +++ K K + GK + +K + A K ++++NL +
Sbjct: 66 --TTFEGHKINVTIAKKKLRAKSKEKGKNENSETLKKELKSKKPKVADKKARLIIRNLSF 123
Query: 458 RTLPTDLKALFEPFGDLGRVLVP--PYGITGLVEFLQ-KN--QAKAAFNSLAYTKFKEVP 512
+ DLK +F FG + V VP P G F+Q KN +A A + + K
Sbjct: 124 KCSEDDLKTIFAQFGAVLEVNVPKKPDGKMRGFAFVQFKNLLEAGKALKGMNMKEIKGRT 183
Query: 513 LYLEWA 518
+ ++WA
Sbjct: 184 VAVDWA 189
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 23/195 (11%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----------GMAYIGFKDEKNCNKAL 275
T+ V LP + + L+ F + V+ F+ G Y+ F ++ +AL
Sbjct: 5 TLFVGRLPPSARSEQLEELFSQV--GPVKQCFVVTEKGSKSCRGFGYVTFSMPEDVQRAL 62
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
+ +F +G ++N+ K AK + N+ +++ D +
Sbjct: 63 KEITTF-EGHKINVTIAKKKLRAKSKEKGKNENSETLKKELKSKKPKVAD---------K 112
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
R+ +RNLS+ +EDDL +F ++G + EV +P K K +GFA V F A +A
Sbjct: 113 KARLIIRNLSFKCSEDDLKTIFAQFGAVLEVNVP-KKPDGKMRGFAFVQFKNLLEAGKAL 171
Query: 396 QHLDGTVFLGRMLHL 410
+ ++ GR + +
Sbjct: 172 KGMNMKEIKGRTVAV 186
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 322 SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFA 381
S++ + D++E +F+RNLS+ E+DL +L +++G L V + + +T+ +KG A
Sbjct: 315 SKKKKRKLPSDVSEGKTVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCA 374
Query: 382 LVTFLMPEHATQAY 395
F E A +
Sbjct: 375 FAQFTTQEAAQKCL 388
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH------RGFGFVEFITK 738
G + +RN+ F +++ ++ EL + FG+LK+VR+ LH +G F +F T+
Sbjct: 329 GKTVFIRNLSFDSEEEDLGELLQQFGDLKYVRIV-------LHPDTEHSKGCAFAQFTTQ 381
Query: 739 NEAKRAMKALCQSTH-----LYGRRLVLEWAEEADNVEDIR-KRTNRYFGT 783
A++ + A L GR+L ++ A D +R K+ + GT
Sbjct: 382 EAAQKCLAAASPEVEGGGLKLDGRQLKVDLAVTRDEAAKLRTKKVKKPTGT 432
>gi|291391162|ref|XP_002712116.1| PREDICTED: RNA binding motif protein 28 isoform 1 [Oryctolagus
cuniculus]
Length = 767
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++ L ++ + + F + GP+ V +K KS G+G+V F E +
Sbjct: 5 TLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKS-----CRGFGYVTFSMPEDVQ 59
Query: 642 QALKVLQNSSLDEHQIEL-------------KRSNRNLESEATTVKRKSSNVAKQTGSKI 688
+ALK + ++ + H+I + K N N E+ +K K VA + +++
Sbjct: 60 RALKEI--TTFEGHKINVTIAKKKLRAKSKEKGKNENSETLKKELKSKKPKVADKK-ARL 116
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
++RN+ F+ + +++ +F FG + V +PKK G RGF FV+F EA +A+K +
Sbjct: 117 IIRNLSFKCSEDDLKTIFAQFGAVLEVNVPKKP--DGKMRGFAFVQFKNLLEAGKALKGM 174
Query: 749 CQSTHLYGRRLVLEWAEEADNVEDIR 774
+ GR + ++WA D +D +
Sbjct: 175 -NMKEIKGRTVAVDWAVAKDKYKDTQ 199
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV L + + L +LF + GP+ + + +K + +GF VTF MPE +A + +
Sbjct: 6 LFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKSCRGFGYVTFSMPEDVQRALKEI 65
Query: 399 DGTVFLGRMLHLIPGKPK-ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
T F G +++ K K + GK + +K + A K ++++NL +
Sbjct: 66 --TTFEGHKINVTIAKKKLRAKSKEKGKNENSETLKKELKSKKPKVADKKARLIIRNLSF 123
Query: 458 RTLPTDLKALFEPFGDLGRVLVP--PYGITGLVEFLQ-KN--QAKAAFNSLAYTKFKEVP 512
+ DLK +F FG + V VP P G F+Q KN +A A + + K
Sbjct: 124 KCSEDDLKTIFAQFGAVLEVNVPKKPDGKMRGFAFVQFKNLLEAGKALKGMNMKEIKGRT 183
Query: 513 LYLEWA 518
+ ++WA
Sbjct: 184 VAVDWA 189
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 23/195 (11%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----------GMAYIGFKDEKNCNKAL 275
T+ V LP + + L+ F + V+ F+ G Y+ F ++ +AL
Sbjct: 5 TLFVGRLPPSARSEQLEELFSQV--GPVKQCFVVTEKGSKSCRGFGYVTFSMPEDVQRAL 62
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
+ +F +G ++N+ K AK + N+ +++ D +
Sbjct: 63 KEITTF-EGHKINVTIAKKKLRAKSKEKGKNENSETLKKELKSKKPKVAD---------K 112
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
R+ +RNLS+ +EDDL +F ++G + EV +P K K +GFA V F A +A
Sbjct: 113 KARLIIRNLSFKCSEDDLKTIFAQFGAVLEVNVP-KKPDGKMRGFAFVQFKNLLEAGKAL 171
Query: 396 QHLDGTVFLGRMLHL 410
+ ++ GR + +
Sbjct: 172 KGMNMKEIKGRTVAV 186
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 322 SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFA 381
S++ + D++E +F+RNLS+ E+DL +L +++G L V + + +T+ +KG A
Sbjct: 327 SKKKKRKLPSDVSEGKTVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCA 386
Query: 382 LVTFLMPEHATQAY 395
F E A +
Sbjct: 387 FAQFTTQEAAQKCL 400
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH------RGFGFVEFITK 738
G + +RN+ F +++ ++ EL + FG+LK+VR+ LH +G F +F T+
Sbjct: 341 GKTVFIRNLSFDSEEEDLGELLQQFGDLKYVRIV-------LHPDTEHSKGCAFAQFTTQ 393
Query: 739 NEAKRAMKALCQSTH-----LYGRRLVLEWAEEADNVEDIR-KRTNRYFGT 783
A++ + A L GR+L ++ A D +R K+ + GT
Sbjct: 394 EAAQKCLAAASPEVEGGGLKLDGRQLKVDLAVTRDEAAKLRTKKVKKPTGT 444
>gi|220909892|ref|YP_002485203.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219866503|gb|ACL46842.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 98
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT++DL + F +YG + V LP D+ET + +GFA V T A + L
Sbjct: 3 IYVGNLSYDVTQNDLVRAFGEYGNVKSVHLPTDRETGRVRGFAFVEMENTPEETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KP+E+
Sbjct: 63 DGAEWMGRDLKVNKAKPRED 82
>gi|392512575|emb|CAD26218.2| NUCLEOLAR PROTEIN OF THE GAR FAMILY [Encephalitozoon cuniculi
GB-M1]
Length = 270
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 27/142 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F++ +SY +TE DL EK G +A V +P+ + + KGF V F E +A + L
Sbjct: 66 VFIKGISYDLTEYDLKSEMEKIGKVARVGIPMTNDHKRNKGFGYVEFCKEEDVKKALK-L 124
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
DGTVFLGR + + P+ N + + I V N+PY
Sbjct: 125 DGTVFLGREVVVNMAHPRAN--------------------------KERHTIYVSNIPYE 158
Query: 459 TLPTDLKALFEPFGDLGRVLVP 480
DLK FE G++ + +P
Sbjct: 159 CDKRDLKKYFEGMGEVVGMSLP 180
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
+E R P T++IK ++++ TE ++ +K G +A V + D K + G+G+
Sbjct: 55 EESRRENPSLTVFIKGISYDLTEYDLKSEMEKIGKVARVGIPMTNDHKR-----NKGFGY 109
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
V+F E + +ALK+ L + + +N + T I V
Sbjct: 110 VEFCKEEDVKKALKLDGTVFLGREVV-------------VNMAHPRANKERHT---IYVS 153
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA--LC 749
NIP++ + ++++ F+ GE+ + LP + L +G+GFV+F K + +R +K +
Sbjct: 154 NIPYECDKRDLKKYFEGMGEVVGMSLPYDRDNNRL-KGYGFVDFGNKEDYERVLKKKLVF 212
Query: 750 QSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+ + +Y R +N ED R R F
Sbjct: 213 EDSTMYHRPAY------KNNREDRRDSNGRGF 238
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF 385
I+V N+ Y + DL K FE G + + LP D++ ++ KG+ V F
Sbjct: 150 IYVSNIPYECDKRDLKKYFEGMGEVVGMSLPYDRDNNRLKGYGFVDF 196
>gi|19549688|ref|NP_599124.1| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|19549694|ref|NP_599127.1| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|221330653|ref|NP_476937.3| RNA-binding protein 9, isoform I [Drosophila melanogaster]
gi|158226|gb|AAC13645.1| RNA-binding protein [Drosophila melanogaster]
gi|22945349|gb|AAF51177.2| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|22945350|gb|AAF51178.2| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|220901922|gb|AAF51179.4| RNA-binding protein 9, isoform I [Drosophila melanogaster]
Length = 444
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 105 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 159
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 160 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 205
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFITKNEAKRAMKALCQS 751
QS++E LF +G++ R+ + +GL +G GF+ F + EA RA+K L +
Sbjct: 206 NMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT 265
Query: 752 T 752
T
Sbjct: 266 T 266
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IA SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 356 IASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 415
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A Q L+G R+L +
Sbjct: 416 VLAIQSLNGYTLGNRVLQV 434
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 112 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 171
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 172 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 206
Query: 459 TLPTDLKALFEPFGDL--GRVLV 479
+DL++LF P+G + R+L
Sbjct: 207 MTQSDLESLFSPYGKIITSRILC 229
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKRVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 146/392 (37%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L +LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G +V ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKRV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
+ELF FG V++ SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KELFGKFGPALSVKVMTD--ESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYVG 264
Query: 763 WAEE 766
A++
Sbjct: 265 RAQK 268
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKRVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|194855197|ref|XP_001968493.1| GG24901 [Drosophila erecta]
gi|190660360|gb|EDV57552.1| GG24901 [Drosophila erecta]
Length = 446
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 107 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 161
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 162 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 207
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFITKNEAKRAMKALCQS 751
QS++E LF +G++ R+ + +GL +G GF+ F + EA RA+K L +
Sbjct: 208 NMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT 267
Query: 752 T 752
T
Sbjct: 268 T 268
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IA SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 358 IASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 417
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A Q L+G R+L +
Sbjct: 418 VLAIQSLNGYTLGNRVLQV 436
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 114 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 173
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 174 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 208
Query: 459 TLPTDLKALFEPFGDL--GRVLV 479
+DL++LF P+G + R+L
Sbjct: 209 MTQSDLESLFSPYGKIITSRILC 231
>gi|307152307|ref|YP_003887691.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306982535|gb|ADN14416.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 116
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL Y VT+DD+ ++F +YG + +V LPID+E+ + +GFA V T+A + L
Sbjct: 3 IYVGNLPYQVTQDDIKEVFGEYGTVKQVKLPIDRESGRVRGFAFVDLDSDAEETKAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + +P+++
Sbjct: 63 DGAEWMGRELKVSKARPRQD 82
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+P+Q Q +++E+F +G +K V+LP SG RGF FV+ + E +A++A
Sbjct: 3 IYVGNLPYQVTQDDIKEVFGEYGTVKQVKLPIDRE-SGRVRGFAFVDLDSDAEETKAIEA 61
Query: 748 LCQSTHLYGRRL 759
L GR L
Sbjct: 62 L-DGAEWMGREL 72
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
E TL++ L++N + ++R F+ G + S V ++ + G+ S GYG+V F T+
Sbjct: 193 EEPATLFVGRLSWNIDDSWLKREFEHIGGVISARVIMER---ATGK--SRGYGYVDFETK 247
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSK-------ILV 690
+ +AL+ +Q +D I L ++ + R +++ AKQ G + V
Sbjct: 248 SAAEKALEEMQGKEIDGRPINL-----DMSTGKPHASRSTNDRAKQYGDSQSALSDTLFV 302
Query: 691 RNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQ 750
N+ F A + + +F +G + R+P + +GFG+V+F + +EAK A++AL
Sbjct: 303 GNLSFNANRDNLFTVFGEYGNVISCRVPTH-PDTQQPKGFGYVQFSSVDEAKAALEAL-N 360
Query: 751 STHLYGRRLVLEWAEEADN 769
++ GR L+++ DN
Sbjct: 361 GEYIEGRPCRLDFSTPRDN 379
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G Y+ F+ + KAL + +GK+++ + D S A+ N+ +AK
Sbjct: 238 GYGYVDFETKSAAEKALEE----MQGKEIDGRPINLDMSTGKPHASRSTND------RAK 287
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK 378
+ + ++ S +FV NLS+ D+L +F +YG + +P +T + K
Sbjct: 288 QYGDSQSAL--------SDTLFVGNLSFNANRDNLFTVFGEYGNVISCRVPTHPDTQQPK 339
Query: 379 GFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
GF V F + A A + L+G GR L P++N
Sbjct: 340 GFGYVQFSSVDEAKAALEALNGEYIEGRPCRLDFSTPRDN 379
>gi|195470919|ref|XP_002087754.1| GE18193 [Drosophila yakuba]
gi|194173855|gb|EDW87466.1| GE18193 [Drosophila yakuba]
Length = 446
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 107 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 161
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 162 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 207
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFITKNEAKRAMKALCQS 751
QS++E LF +G++ R+ + +GL +G GF+ F + EA RA+K L +
Sbjct: 208 NMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT 267
Query: 752 T 752
T
Sbjct: 268 T 268
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IA SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 358 IASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 417
Query: 392 TQAYQHLDGTVFLGRMLHL 410
A Q L+G R+L +
Sbjct: 418 VLAIQSLNGYTLGNRVLQV 436
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 114 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 173
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 174 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 208
Query: 459 TLPTDLKALFEPFGDL--GRVLV 479
+DL++LF P+G + R+L
Sbjct: 209 MTQSDLESLFSPYGKIITSRILC 231
>gi|290996979|ref|XP_002681059.1| RRM domain-containing protein [Naegleria gruberi]
gi|284094682|gb|EFC48315.1| RRM domain-containing protein [Naegleria gruberi]
Length = 285
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 105/204 (51%), Gaps = 25/204 (12%)
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDT----TLYIKNLNFNSTEDSIRRHF 601
E +++E EEDN ++N E+ ++++ + D T+ ++NL++N+++DSI+
Sbjct: 12 ERDQQEQIQEEDNGLKRKREDDNQEDAKKQKYDYDARAAYTVMLRNLSYNTSDDSIKEKL 71
Query: 602 KKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKR 661
K G I V + + + S GYGFV+F E+ + + L+ +D +++L++
Sbjct: 72 SKYGSIVRVNIP------TDERGRSRGYGFVEFDEVEAAQKVVD-LKAMEMDGREVQLQQ 124
Query: 662 SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM 721
S E T +++ V N+P A++ ++ ELF+ GE++ VR+PK
Sbjct: 125 SKARDEFSGRT-------------TQVFVGNLPESAEEQDIRELFETCGEIEEVRMPKDK 171
Query: 722 VGSGLHRGFGFVEFITKNEAKRAM 745
+ +GF FV+F + K A+
Sbjct: 172 -DTEKKKGFAFVQFRDSSSVKAAL 194
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 33/183 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ +RNLSY ++D + + KYG + V +P D E +++G+ V F E A Q L
Sbjct: 53 VMLRNLSYNTSDDSIKEKLSKYGSIVRVNIPTD-ERGRSRGYGFVEFDEVE-AAQKVVDL 110
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
GR + L K + D F+ R+ + + V NLP
Sbjct: 111 KAMEMDGREVQLQQSKAR-------------------DEFS----GRTTQ-VFVGNLPES 146
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSLAYTKFKEVP 512
D++ LFE G++ V +P T V+F + KAA ++FK V
Sbjct: 147 AEEQDIRELFETCGEIEEVRMPKDKDTEKKKGFAFVQFRDSSSVKAALEKDG-SEFKGVS 205
Query: 513 LYL 515
+ +
Sbjct: 206 IRV 208
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 336 SGR---IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
SGR +FV NL + E D+ +LFE G + EV +P DK+T+K KGFA V F +
Sbjct: 132 SGRTTQVFVGNLPESAEEQDIRELFETCGEIEEVRMPKDKDTEKKKGFAFVQF-RDSSSV 190
Query: 393 QAYQHLDGTVFLGRMLHLIPGKPKEN 418
+A DG+ F G + + K N
Sbjct: 191 KAALEKDGSEFKGVSIRVNEEKSTRN 216
>gi|428312632|ref|YP_007123609.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428254244|gb|AFZ20203.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 99
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT+DDL +F +YG + V LP D+ET + +GF V A + L
Sbjct: 3 IYVGNLSYQVTQDDLNAVFAEYGTVKRVQLPTDRETGRIRGFGFVEMSSDAEEEAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR L + KP+EN+ + G
Sbjct: 63 DGAEWMGRDLKVNKAKPRENKSSSGG 88
>gi|399949922|gb|AFP65578.1| polyadenylate binding protein [Chroomonas mesostigmatica CCMP1168]
Length = 545
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLG------MAYIGFKDEKNCNKALN-KNK 279
+ VKNLP+ + ++ L F + + ++GF +K+ KA+N N
Sbjct: 15 LCVKNLPSWITEEKLMLVFSKYGIITDIKIIRDKEKKKDFCFVGFFKKKDAEKAINDANF 74
Query: 280 SFWKGKQLNI-YKYS-KDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG 337
F K++ + + +S K N ++ + D I+ + + +S + E E+G
Sbjct: 75 CFLGNKKITVEHAFSQKINISERKRKSID--------IETQSKDKKSESSRLFEKTFETG 126
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
+IF+RN S +++D+ LF ++G ++ + K K+ A V F +PE A +A
Sbjct: 127 KIFIRNFSNQCSQEDIKNLFSQFGFVSSFFVYPYKFGKKSSNEAFVQFALPECAIKAAFF 186
Query: 398 LDGTVFLGRMLHLIPGKPK 416
LDG +F GR+LH++P P+
Sbjct: 187 LDGKIFRGRILHILPFFPR 205
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
KILVRNIPF +++++F+ FG++ +R+PK +G HRGF F+EF + EAK+ +
Sbjct: 468 KILVRNIPFGVNLEKIKKIFENFGKIISIRMPKNKLGK--HRGFAFIEFKSLEEAKKTVL 525
Query: 747 ALCQSTHLYGRRLVL 761
+ Q+ HL+ R L +
Sbjct: 526 S-TQNIHLFNRHLFV 539
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 26/160 (16%)
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
R+ V+NL +TE+ L +F KYG + ++ + DKE K K F V F + A +A
Sbjct: 13 SRLCVKNLPSWITEEKLMLVFSKYGIITDIKIIRDKE--KKKDFCFVGFFKKKDAEKAIN 70
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI------- 449
+ FLG K E K++ ISERK + + +++ K+
Sbjct: 71 DAN-FCFLG-------NKKITVEHAFSQKIN--ISERKRKSIDIETQSKDKKSESSRLFE 120
Query: 450 -------ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY 482
I ++N + D+K LF FG + V PY
Sbjct: 121 KTFETGKIFIRNFSNQCSQEDIKNLFSQFGFVSSFFVYPY 160
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+ L +KNL TE+ + F K G I + + R K+ K + FV F+ ++
Sbjct: 13 SRLCVKNLPSWITEEKLMLVFSKYGIITDIKIIRDKEKKK-------DFCFVGFFKKKDA 65
Query: 641 NQALK-----VLQNSSLD-EHQI-------ELKRSNRNLESEATTVKRKSSNVAKQT--G 685
+A+ L N + EH E KR + ++E+++ K +SS + ++T
Sbjct: 66 EKAINDANFCFLGNKKITVEHAFSQKINISERKRKSIDIETQSKDKKSESSRLFEKTFET 125
Query: 686 SKILVRNIPFQAKQSEVEELFKAFG 710
KI +RN Q Q +++ LF FG
Sbjct: 126 GKIFIRNFSNQCSQEDIKNLFSQFG 150
>gi|427709160|ref|YP_007051537.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427361665|gb|AFY44387.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 99
Score = 71.2 bits (173), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 51/86 (59%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NLSY VTED L+ +F +YG + + LP D+ET + +GF V T A + L
Sbjct: 3 VYVGNLSYEVTEDSLSAVFAEYGSVKRIQLPTDRETGRMRGFGFVEMGTDAEETSAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR L + KPKE+ G+ G
Sbjct: 63 DGAEWMGRDLKVNKAKPKEDRGSFGG 88
>gi|428776063|ref|YP_007167850.1| RNP-1 like RNA-binding protein [Halothece sp. PCC 7418]
gi|428690342|gb|AFZ43636.1| RNP-1 like RNA-binding protein [Halothece sp. PCC 7418]
Length = 95
Score = 71.2 bits (173), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL Y+VT++DL ++F +YG + V LP D+ET + +GF V + A L
Sbjct: 3 IYVGNLDYSVTQEDLGEVFAEYGTVKRVYLPTDRETGRMRGFGFVEMSSESEESNAISEL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR L + P +P+EN+G+ G
Sbjct: 63 DGAEWMGRELKVNPARPRENKGSFGG 88
>gi|411119073|ref|ZP_11391453.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710936|gb|EKQ68443.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 85
Score = 71.2 bits (173), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 48/79 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY T DDLT++F +YG + V LP+D+ET K +GFA V H A L
Sbjct: 3 IYVGNLSYRATADDLTEVFAEYGAVKRVSLPMDRETGKMRGFAFVELEEDAHEDTAISEL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG ++GR L + KP+E
Sbjct: 63 DGAEWMGRQLKVNKAKPRE 81
>gi|315047680|ref|XP_003173215.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma gypseum CBS
118893]
gi|311343601|gb|EFR02804.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma gypseum CBS
118893]
Length = 1329
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 30/190 (15%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG----- 630
EP DTT+++ N + E+ IR F G IA V +F S+ Y
Sbjct: 916 EPVTDTTIFVTNFPPTADENYIRELFHSYGEIAEV------------RFPSLKYNTHRRF 963
Query: 631 -FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
+VQF + S A + + + ++ +K S+ + +R++ + A + G +I
Sbjct: 964 CYVQFTSSSSAYAATGLDKKDLGEGLELVVKISDPS--------QRQARSGAYEEGREIY 1015
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V NIP++ + ++ ELF A+G+++ VR+P K+ +G RGF FV F TK+++ A+ AL
Sbjct: 1016 VCNIPYKTTEGDLVELFTAYGDVESVRIPTKV--NGETRGFAFVSFATKDQSTAAL-ALN 1072
Query: 750 QSTHLYGRRL 759
+ T GR L
Sbjct: 1073 EKT-FKGREL 1081
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 22/196 (11%)
Query: 335 ESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
E GR I+V N+ Y TE DL +LF YG + V +P K +T+GFA V+F + +T
Sbjct: 1009 EEGREIYVCNIPYKTTEGDLVELFTAYGDVESVRIPT-KVNGETRGFAFVSFATKDQSTA 1067
Query: 394 AYQHLDGTVFLGRMLHL---IPGKPKENEGNVDGKVHCCISERK--------------LD 436
A L+ F GR L++ K ++ + + + + +D
Sbjct: 1068 ALA-LNEKTFKGRELNVRLSTSTGAKRHQNTIVSRSESPATNAQRNGTSTASPPPGSLVD 1126
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQA 496
+ R R + + N+P ++AL EP G L ++ + P +VEF N
Sbjct: 1127 GHIKPKGDRHIRTLALMNVPDTVNDARIRALAEPHGALVKINLRPDHQGAIVEF--TNTH 1184
Query: 497 KAAFNSLAYTKFKEVP 512
A SLA ++ P
Sbjct: 1185 DAGIASLALEGYEITP 1200
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 93/235 (39%), Gaps = 44/235 (18%)
Query: 514 YLEWAPEGVFAEA----KEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
Y + AP V A ++ E + + EGE E +++ +P VE
Sbjct: 783 YAQHAPAAVGAHPEPVEQQHPHPDEAQSAGKRKREGEPEMNGTVSKKAKGGTIPSVEAPT 842
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
+ E ++ IKNL + + IR+ F+ CG + S+ + PG G
Sbjct: 843 RDREH------ASVIIKNLPKDIPQVKIRQFFRDCGKLNSLQML-------PGD---SGS 886
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
++F T E A ++ R LE TV+ T + I
Sbjct: 887 ALLEFDTHEDALAA---------------GTKNQRLLEGSKVTVE-------PVTDTTIF 924
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
V N P A ++ + ELF ++GE+ VR P + HR F +V+F + + A A
Sbjct: 925 VTNFPPTADENYIRELFHSYGEIAEVRFPS--LKYNTHRRFCYVQFTSSSSAYAA 977
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 39/221 (17%)
Query: 210 SVPPVSKAPV---HKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLAS-------VRTTFL 258
+ PP K+P +R T+ V+ L A ++ K+L+A+F+ + P+ V
Sbjct: 229 TTPPKRKSPEPTDDERDRRTVFVQQLAARLRTKELQAFFEAVGPVVEAQIVKDRVSGRSK 288
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G+ Y+ FKDE++ KA+ K L I ++ A+ +N +A+
Sbjct: 289 GVGYVEFKDEESVQKAIQ----LTGQKLLGIPIIAQLTEAE-------------KNRQAR 331
Query: 319 HWK---SQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETD 375
H + +Q + + F R++V N+ +++TEDDL +FE +G L E + +E
Sbjct: 332 HTEGTATQSNGIPFH-------RLYVGNIHFSITEDDLKNVFEPFGEL-EFVQLQKEEQG 383
Query: 376 KTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
++KG+ V F+ P A +A + ++G GR + + G K
Sbjct: 384 RSKGYGFVQFIDPAQAKEALEKMNGFELAGRPIRVGLGNDK 424
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 21/182 (11%)
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
D+ER+ T++++ L ++ F+ GP+ + + + G+ S G G+
Sbjct: 241 DDERDRR---TVFVQQLAARLRTKELQAFFEAVGPVVEAQIVKDR---VSGR--SKGVGY 292
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQI-ELKRSNRNLESEATTVKRKSSNVAKQTGS---- 686
V+F ES+ +A+++ L I +L + +N ++ R + A Q+
Sbjct: 293 VEFKDEESVQKAIQLTGQKLLGIPIIAQLTEAEKNRQA------RHTEGTATQSNGIPFH 346
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
++ V NI F + +++ +F+ FGEL+FV+L K+ G +G+GFV+FI +AK A++
Sbjct: 347 RLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEE--QGRSKGYGFVQFIDPAQAKEALE 404
Query: 747 AL 748
+
Sbjct: 405 KM 406
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 89/234 (38%), Gaps = 54/234 (23%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDL-------GRVLVPPYGITGLVEFLQKNQAK 497
R +R + V+ L R +L+A FE G + RV G+ G VEF + +
Sbjct: 244 RDRRTVFVQQLAARLRTKELQAFFEAVGPVVEAQIVKDRVSGRSKGV-GYVEFKDEESVQ 302
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEED 557
A L K +P+ + E EKN + E TA +
Sbjct: 303 KAIQ-LTGQKLLGIPIIAQLT---------------EAEKNRQA------RHTEGTATQS 340
Query: 558 NQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
N G+P LY+ N++F+ TED ++ F+ G + V + +++
Sbjct: 341 N--GIPF----------------HRLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEE- 381
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
Q S GYGFVQF +AL+ + L I + N E+T
Sbjct: 382 -----QGRSKGYGFVQFIDPAQAKEALEKMNGFELAGRPIRVGLGNDKFTPEST 430
>gi|218437654|ref|YP_002375983.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218170382|gb|ACK69115.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 110
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 53/82 (64%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V N+ Y VT+DD+ ++F +YG + +V LP+D+E+ + +GFA V + A + L
Sbjct: 3 IYVGNIPYQVTQDDIKEVFGEYGTVKQVKLPVDRESGRVRGFAFVDLDTEDQENSAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEG 420
DG ++GR L + +P++++G
Sbjct: 63 DGAEWMGRELKVSKARPRQDKG 84
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V NIP+Q Q +++E+F +G +K V+LP SG RGF FV+ T+++ A++A
Sbjct: 3 IYVGNIPYQVTQDDIKEVFGEYGTVKQVKLPVDRE-SGRVRGFAFVDLDTEDQENSAIEA 61
Query: 748 LCQSTHLYGRRL 759
L GR L
Sbjct: 62 L-DGAEWMGREL 72
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTE-GKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y++TQ+ +K F E GTV V+L E G+ R FAF+ EDQ +A++ +
Sbjct: 10 YQVTQDDIKEVFGEYGTVKQVKLPVDRESGRVRGFAFVDLDTEDQENSAIEALDGAEWMG 69
Query: 86 SRIKVEKCSNLGDTTKPKSWSK 107
+KV K D S++K
Sbjct: 70 RELKVSKARPRQDKGPSGSYNK 91
>gi|323305308|gb|EGA59055.1| Pab1p [Saccharomyces cerevisiae FostersB]
gi|323333819|gb|EGA75210.1| Pab1p [Saccharomyces cerevisiae AWRI796]
Length = 466
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T LY+KN+N +T++ + F K GPI S ++ + D K G+GFV + E
Sbjct: 108 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK------LKGFGFVNYEKHEDA 161
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQ 696
+A++ L +S L+ ++ + R+ + E K+ + +AK G + V+N+
Sbjct: 162 VKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDS 221
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
++EE F +G + ++ + +G +GFGFV F T EA +A+ Q + G
Sbjct: 222 VDDEKLEEEFAPYGTITSAKVMR--TENGKSKGFGFVCFSTPEEATKAITEKNQQI-VAG 278
Query: 757 RRLVLEWAEEAD 768
+ L + A+ D
Sbjct: 279 KPLYVAIAQRKD 290
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S +A ++ K S G+GFV F + +
Sbjct: 17 IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK------SKGFGFVHFEEEGAAKE 70
Query: 643 ALKVLQNSSLDEHQI----ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
A+ L L+ +I L R R+ + E T K + + V+NI +
Sbjct: 71 AIDALNGMLLNGQEIYVAPHLSRKERDSQLEET----------KAHYTNLYVKNINSETT 120
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
+ +ELF FG + L K G +GFGFV + +A +A++AL S L G +
Sbjct: 121 DEQFQELFAKFGPIVSASLEKD--ADGKLKGFGFVNYEKHEDAVKAVEALNDS-ELNGEK 177
Query: 759 LVLEWAE 765
L + A+
Sbjct: 178 LYVGRAQ 184
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
A H +E Q E A ++V+N++ T++ +LF K+GP+ L D + K
Sbjct: 88 APHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDAD-GK 146
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
KGF V + E A +A + L+ + G L++ + K+NE ++H +++ +
Sbjct: 147 LKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQ-KKNE-----RMHVL--KKQYE 198
Query: 437 AFNQVVEARSKRI-ILVKNLPYRTLPTDLKALFEPFGDL 474
A+ A+ + + + VKNL L+ F P+G +
Sbjct: 199 AYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTI 237
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 118/315 (37%), Gaps = 66/315 (20%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
SG IF++NL + L F +G + + D E K+KGF V F A +A
Sbjct: 14 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAI 72
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-ILVKN 454
L+G + G+ +++ P H ER +Q+ E ++ + VKN
Sbjct: 73 DALNGMLLNGQEIYVAP--------------HLSRKERD----SQLEETKAHYTNLYVKN 114
Query: 455 LPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYTKFK 509
+ T + LF FG + + G V + + A A +L ++
Sbjct: 115 INSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELN 174
Query: 510 EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
LY+ G+ ++KNE ++ + + QGV
Sbjct: 175 GEKLYV----------------GRAQKKNERMHVLKKQYEAYRLEKMAKYQGV------- 211
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
L++KNL+ + ++ + F G I S V R ++ K S G+
Sbjct: 212 ------------NLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGK------SKGF 253
Query: 630 GFVQFYTRESLNQAL 644
GFV F T E +A+
Sbjct: 254 GFVCFSTPEEATKAI 268
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV+NL +V ++ L + F YG + + + E K+KGF V F PE AT+A
Sbjct: 213 LFVKNLDDSVDDEKLEEEFAPYGTITSAKV-MRTENGKSKGFGFVCFSTPEEATKAITEK 271
Query: 399 DGTVFLGRMLHL 410
+ + G+ L++
Sbjct: 272 NQQIVAGKPLYV 283
>gi|350633123|gb|EHA21489.1| hypothetical protein ASPNIDRAFT_125918 [Aspergillus niger ATCC
1015]
Length = 264
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 20/206 (9%)
Query: 563 PEVEENVEEDEEREPEPDT---TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
P+ E+ VE R EP T T++I N+ ++ T + +++ +K G + V +
Sbjct: 72 PDAEKQVEARRRRLQEPPTPKETVFIGNVFYDVTREDLKKAMEKYGVVEKVVLVLD---- 127
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN 679
+ +S GYG+VQF + ++ +A+ L + ++ ++ + N+ R+ N
Sbjct: 128 --NRGISKGYGYVQFDSIDAAQRAVDALNMRLFEGRRVTVQFAQNNV------YHRRQLN 179
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
+T + + N+PF+ ++ ELFK + +R+ +G RGF EF++ +
Sbjct: 180 APTRT---LYIGNLPFEMTDRDLNELFKDVQNVVDIRVAVDR-RTGQARGFAHAEFVSTS 235
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWAE 765
AK AM A+ ++ YGRRL L++++
Sbjct: 236 SAKAAM-AILENKLPYGRRLRLDYSK 260
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 27/171 (15%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F+ N+ Y VT +DL K EKYG + +V+L +D +KG+ V F + A +A L
Sbjct: 95 VFIGNVFYDVTREDLKKAMEKYGVVEKVVLVLDNR-GISKGYGYVQFDSIDAAQRAVDAL 153
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ +F GR + + + + NV R+L+A R + + NLP+
Sbjct: 154 NMRLFEGRRVTV-----QFAQNNV-------YHRRQLNA--------PTRTLYIGNLPFE 193
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAFNSL 503
DL LF+ ++ + V TG EF+ + AKAA L
Sbjct: 194 MTDRDLNELFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAMAIL 244
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDI--------AESGRIFVRNLSYTVTEDDLTKLF 357
D +++ + + ++ + +VQFA++ A + +++ NL + +T+ DL +LF
Sbjct: 144 DAAQRAVDALNMRLFEGRRVTVQFAQNNVYHRRQLNAPTRTLYIGNLPFEMTDRDLNELF 203
Query: 358 EKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+ + ++ + +D+ T + +GFA F+ A A L+ + GR L L
Sbjct: 204 KDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAMAILENKLPYGRRLRL 256
>gi|428214099|ref|YP_007087243.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428002480|gb|AFY83323.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 104
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT++DLT +F +YG + V LP D+ET + +GFA V T A + L
Sbjct: 3 IYVGNLSYEVTQEDLTAVFAEYGSVQRVHLPTDRETGRPRGFAFVEMKSETEETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG ++GR + + KP+E
Sbjct: 63 DGAEWMGRDMKVNKAKPRE 81
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 146/392 (37%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L +LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
+ELF FG V++ SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KELFGKFGPALSVKVMTD--ESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYVG 264
Query: 763 WAEE 766
A++
Sbjct: 265 RAQK 268
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|350397588|ref|XP_003484924.1| PREDICTED: RNA-binding protein 28-like [Bombus impatiens]
Length = 768
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 28/216 (12%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQKNQAKAAFNSL 503
I+V+N+P++T P D+K L+EPFG++ + P P G ++F Q A A S
Sbjct: 45 IIVRNIPFKTTPEDVKKLYEPFGEILEINFPKRTDGSPVGCC-FIQFKQLKDASKAIFST 103
Query: 504 AYTKFKEVPLYLEWA-PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGV 562
+F + WA + E +K K K + E G E+ ++ E+ Q
Sbjct: 104 NKKEFLGRIINSSWAVSRSKYCEKLKKDSEKAKNLDNEHGTSEGTERNQDKKHENKQMKQ 163
Query: 563 PEVEENVEEDE--------------EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
E EE+ + E ++ + + I+NL+F +TE+ +++HF G +
Sbjct: 164 DEDEEDPSKQETLLQIKRERRRLLKDKNRKKRARIVIRNLSFQATEEDLKKHFSPYGAVE 223
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ + ++ D K ++G F+QF +S +A+
Sbjct: 224 EIRILKRSDGK------NIGCAFLQFEHVQSAAKAI 253
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 42/221 (19%)
Query: 227 IVVKNLPAGVKKKDLKAYFKP----LPLASVRTTF---LGMAYIGFKDEKNCNKAL-NKN 278
I+V+N+P +D+K ++P L + + T +G +I FK K+ +KA+ + N
Sbjct: 45 IIVRNIPFKTTPEDVKKLYEPFGEILEINFPKRTDGSPVGCCFIQFKQLKDASKAIFSTN 104
Query: 279 KSFWKGKQLNIY------KYSK------------DNSAKYSGAADDNNNASMENIKAKHW 320
K + G+ +N KY + DN S + N + EN + K
Sbjct: 105 KKEFLGRIINSSWAVSRSKYCEKLKKDSEKAKNLDNEHGTSEGTERNQDKKHENKQMKQD 164
Query: 321 KSQEDS------VQFA---------EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE 365
+ +ED +Q ++ + RI +RNLS+ TE+DL K F YG + E
Sbjct: 165 EDEEDPSKQETLLQIKRERRRLLKDKNRKKRARIVIRNLSFQATEEDLKKHFSPYGAVEE 224
Query: 366 VILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGR 406
+ + + + K G A + F + A +A + + L R
Sbjct: 225 IRI-LKRSDGKNIGCAFLQFEHVQSAAKAIHYTNLQSLLNR 264
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 121/282 (42%), Gaps = 59/282 (20%)
Query: 445 RSKRI-ILVKNLPYRTLPTDLKALFEPFGDLG--RVLVPPYGITGLVEFLQKNQAKAAFN 501
R KR I+++NL ++ DLK F P+G + R+L G FLQ ++A
Sbjct: 192 RKKRARIVIRNLSFQATEEDLKKHFSPYGAVEEIRILKRSDGKNIGCAFLQFEHVQSAAK 251
Query: 502 SLAYTKFKEV---PLYLEWA-PEGVFAEAKEKSKGKEKEKNEEEGE-------------- 543
++ YT + + P+ ++WA + FA+ ++K +++ + + E E
Sbjct: 252 AIHYTNLQSLLNRPIIVDWAVSKNKFAQNNSENKQEDEVRVKVEDESDIEDTDNTKQLSL 311
Query: 544 ----EGEEEK----KENT---------AEEDNQ--------------QGVPEVEENVEED 572
EGE+EK EN E DN+ QG +++E
Sbjct: 312 NGELEGEDEKLDIVTENVEFDNNCLDEVETDNESEISGNNENNEDEEQGKIDIKETKPRF 371
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
+ + T+++KN+ F+ D ++++ ++ GP+ V P S G FV
Sbjct: 372 KSHDVSEGKTIFLKNVPFSVKNDELKKYMERYGPVYYALVC-----IDPLTEFSRGTAFV 426
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIELKRS-NRN-LESEATT 672
+F E + L +++ +E R+ +RN +E++A +
Sbjct: 427 KFKNVEDAEKCLSAGNELQMEDQILEAHRALDRNEIENKANS 468
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
+ D++E IF++N+ ++V D+L K E+YGP+ ++ ID T+ ++G A V F E
Sbjct: 373 SHDVSEGKTIFLKNVPFSVKNDELKKYMERYGPVYYALVCIDPLTEFSRGTAFVKFKNVE 432
Query: 390 HATQA 394
A +
Sbjct: 433 DAEKC 437
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+I+VRNIPF+ +V++L++ FGE+ + PK+ GS + G F++F +A +A+
Sbjct: 44 RIIVRNIPFKTTPEDVKKLYEPFGEILEINFPKRTDGSPV--GCCFIQFKQLKDASKAIF 101
Query: 747 ALCQSTHLYGRRLVLEWA 764
+ + L GR + WA
Sbjct: 102 STNKKEFL-GRIINSSWA 118
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAYQ 396
RI VRN+ + T +D+ KL+E +G + E+ P K TD + G + F + A++A
Sbjct: 44 RIIVRNIPFKTTPEDVKKLYEPFGEILEINFP--KRTDGSPVGCCFIQFKQLKDASKAIF 101
Query: 397 HLDGTVFLGRMLH 409
+ FLGR+++
Sbjct: 102 STNKKEFLGRIIN 114
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 173/425 (40%), Gaps = 81/425 (19%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSS 86
++ T+E LK F G V ++++ ++GK AF+ + A A+ Y N + +
Sbjct: 205 FQATEEDLKKHFSPYGAVEEIRILKRSDGKNIGCAFLQFEHVQSAAKAIHYTNLQSLLNR 264
Query: 87 RIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKNDPT 146
I V+ S +K+A ++S ++ + K +D + + N
Sbjct: 265 PIIVDWAV---------SKNKFAQNNSENKQEDEVRVK-------VEDESDIEDTDNTKQ 308
Query: 147 FSDFLQLHGKD-----VSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKS 201
S +L G+D V++ + N +E E +NE E I+ + ++ + + K
Sbjct: 309 LSLNGELEGEDEKLDIVTENVEFDNNCLDEVETDNESE----ISGNNENNEDEEQGKIDI 364
Query: 202 KDTAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAY---FKPLPLASVRTTFL 258
K+T P S VS+ TI +KN+P VK +LK Y + P+ A V L
Sbjct: 365 KETKPRFKS-HDVSEG-------KTIFLKNVPFSVKNDELKKYMERYGPVYYALVCIDPL 416
Query: 259 -----GMAYIGFK---DEKNC----------------NKALNKN--------KSFWKGKQ 286
G A++ FK D + C ++AL++N K + +
Sbjct: 417 TEFSRGTAFVKFKNVEDAEKCLSAGNELQMEDQILEAHRALDRNEIENKANSKQYKQKDS 476
Query: 287 LNIYKYSKDNSAKYSGAADDNNNASM-ENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLS 345
N+Y + S AA + M + ++ + WKSQ ++ R+ V NL
Sbjct: 477 RNLYLVKEGVILAGSSAAVGVSATDMSKRLQIERWKSQ--ILRNLNMFVSRVRLVVHNLP 534
Query: 346 YTVTEDDLTKLFEKYGPLAEV-----ILPIDKETD-----KTKGFALVTFLMPEHATQAY 395
T+ +D K+ E++ P V I+ K D K+K + V+F E A +
Sbjct: 535 ATLNDDKFRKILERHSPPTAVIREARIMRDPKNVDLKGVWKSKEYGFVSFTKHEDALETL 594
Query: 396 QHLDG 400
+ ++
Sbjct: 595 RSVNN 599
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 648 QNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFK 707
++ S E +++KR R L + KR ++I++RN+ FQA + ++++ F
Sbjct: 168 EDPSKQETLLQIKRERRRLLKDKNRKKR----------ARIVIRNLSFQATEEDLKKHFS 217
Query: 708 AFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+G ++ +R+ K+ G + G F++F A +A+ L R ++++WA
Sbjct: 218 PYGAVEEIRILKRSDGKNI--GCAFLQFEHVQSAAKAI-HYTNLQSLLNRPIIVDWA 271
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
Length = 97
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL + V +DD+ ++F++YG + V LP+D+ET K +GFA V PE T+A L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR L + + KE + + G
Sbjct: 63 DGAQWMGRELKVNQAREKEPKSSFGG 88
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+PF+ Q +V E+FK +G++K V LP +G RGF FVE T E +A+ A
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRE-TGKKRGFAFVEMETPEEETKAIAA 61
Query: 748 LCQSTHLYGRRLVLEWAEE 766
L GR L + A E
Sbjct: 62 L-DGAQWMGRELKVNQARE 79
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T LY+KN+N +T++ + F K GPI S ++ + D K G+GFV + E
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK------LKGFGFVNYEKHEDA 272
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQ 696
+A++ L +S L+ ++ + R+ + E K+ + +AK G + V+N+
Sbjct: 273 VKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDS 332
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
++EE F +G + ++ + +G +GFGFV F T EA +A+ Q + G
Sbjct: 333 VDDEKLEEEFAPYGTITSAKVMR--TENGKSKGFGFVCFSTPEEATKAITEKNQQI-VAG 389
Query: 757 RRLVLEWAEEAD 768
+ L + A+ D
Sbjct: 390 KPLYVAIAQRKD 401
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 158/434 (36%), Gaps = 108/434 (24%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRT-------TFLGMAYIGFKDEKNCNKALNK 277
++ V +L V + L F P+ ++S+R T LG AY+ F D + KA+ +
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N + KG+ I +D S + G S
Sbjct: 99 LNYTPIKGRLCRIMWSQRDPSLRKKG---------------------------------S 125
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G IF++NL + L F +G + + D E K+KGF V F A +A
Sbjct: 126 GNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAID 184
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-ILVKNL 455
L+G + G+ +++ P H ER +Q+ E ++ + VKN+
Sbjct: 185 ALNGMLLNGQEIYVAP--------------HLSRKERD----SQLEETKAHYTNLYVKNI 226
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYTKFKE 510
T + LF FG + + G V + + A A +L ++
Sbjct: 227 NSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNG 286
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
LY+ G+ ++KNE ++ + + QGV
Sbjct: 287 EKLYV----------------GRAQKKNERMHVLKKQYEAYRLEKMAKYQGV-------- 322
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
L++KNL+ + ++ + F G I S V R ++ K S G+G
Sbjct: 323 -----------NLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGK------SKGFG 365
Query: 631 FVQFYTRESLNQAL 644
FV F T E +A+
Sbjct: 366 FVCFSTPEEATKAI 379
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L + +E + F G ++S+ V R K+ S+GY +V F E+
Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT-----SLGYAYVNFNDHEAG 92
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A++ L + + + S R+ ++++K S I ++N+
Sbjct: 93 RKAIEQLNYTPIKGRLCRIMWSQRD-----PSLRKKGS-------GNIFIKNLHPDIDNK 140
Query: 701 EVEELFKAFGELKFVRLPKKMVG--SGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F FG++ L K+ +G +GFGFV F + AK A+ AL
Sbjct: 141 ALYDTFSVFGDI----LSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV+NL +V ++ L + F YG + + + E K+KGF V F PE AT+A
Sbjct: 324 LFVKNLDDSVDDEKLEEEFAPYGTITSAKV-MRTENGKSKGFGFVCFSTPEEATKAITEK 382
Query: 399 DGTVFLGRMLHL 410
+ + G+ L++
Sbjct: 383 NQQIVAGKPLYV 394
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
+ELF FG V++ SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KELFGKFGPALSVKVMTD--ESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYVG 264
Query: 763 WAEE 766
A++
Sbjct: 265 RAQK 268
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 141/372 (37%), Gaps = 94/372 (25%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------FLGMAYIGFKDEKNCNKALNK 277
++ V +L V + L F P P+ S+R LG AY+ F+ + +AL+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASMEN-------------IKAK-- 318
N KGK + I +D S + SG + N + S++N + K
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 131
Query: 319 ------------HWKSQEDSVQFAEDI----------------------AESG------- 337
H+++QE + + E + AE G
Sbjct: 132 CDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT 191
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
++++N + ++ L +LF K+GP V + D E+ K+KGF V+F E A +A
Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 398 LDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA---FNQVVEARSKRI----I 450
++G G+ +++ G KV ER+ + F Q+ + R R +
Sbjct: 251 MNGKELNGKQIYV---------GRAQKKV-----ERQTELKRKFEQMKQDRITRYQGVNL 296
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYT 506
VKNL L+ F PFG + V G G V F +A A +
Sbjct: 297 YVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGR 356
Query: 507 KFKEVPLYLEWA 518
PLY+ A
Sbjct: 357 IVATKPLYVALA 368
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|429965863|gb|ELA47860.1| hypothetical protein VCUG_00702 [Vavraia culicis 'floridensis']
Length = 413
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+KI+++NIPFQA + E++ + + +LK +RLPKK G+H+G+ FV + +AK
Sbjct: 335 NKIIIKNIPFQANKEEIKRILTSQVKLKDIRLPKK--RDGMHKGYCFVTLNSPEDAKAVY 392
Query: 746 KALCQSTHLYGRRLVLEWAE 765
+ +THLYGRRLV+E A+
Sbjct: 393 QYFGNNTHLYGRRLVIEPAQ 412
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
KIT+ ++ FEE GT+TD+ L E R FIGY +++ A+ A+ + +YV + +
Sbjct: 11 KITESNIRTIFEEYGTITDIFLMKKNELVNRGVCFIGYSKQEYAREAIRQRHRSYVQNRQ 70
Query: 88 IKVEKCSNLG 97
I +E + G
Sbjct: 71 ITLEMVRDEG 80
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 137/337 (40%), Gaps = 61/337 (18%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKDEKNCNKAL-N 276
+V+KNLP + + +++ F+ ++ FL G+ +IG+ ++ +A+
Sbjct: 3 LVIKNLPPKITESNIRTIFE--EYGTITDIFLMKKNELVNRGVCFIGYSKQEYAREAIRQ 60
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
+++S+ + +Q+ + D+ + +K+ +S D +I +S
Sbjct: 61 RHRSYVQNRQITL-----------EMVRDEGLKQLTKELKSMGSESNRDDDDLPVEI-KS 108
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
+++ L V ++D+ F + ++ + +D++T K G A++T E A +A +
Sbjct: 109 KSLYLTKLPPMVCKEDILNYFSD-CSVKDIEMLLDEKTGKFYGHAVITMNDLESAKKAME 167
Query: 397 HLDGTVFLGRMLHLI----PGKPKENEG----NVDGKVHCCISERKL---DAFNQVVEAR 445
D V LGR + + P K N + V +E K+ + N E
Sbjct: 168 RKD--VLLGRRISVSFYKEPSSKKTYYSQLFFNFESVVESICNEEKITRKELLNLKDENL 225
Query: 446 SKRIILVK----------------NLPYRTLPTDLKALFEPFGDL-------GRVLVPPY 482
RI LV+ NL T + K L +L + V P
Sbjct: 226 GTRISLVETHLVEQTRRFLENNNINLDNLTGKVNKKVLIVRNSNLLSLNFRSCAIKVAPS 285
Query: 483 GITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAP 519
L+EF + AK ++ L Y + K+ +Y+++ P
Sbjct: 286 KCLALLEFKSEEAAKKVYDELQYRRVKDKAIYVDFLP 322
>gi|383855732|ref|XP_003703364.1| PREDICTED: RNA-binding protein 28-like [Megachile rotundata]
Length = 747
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 128/566 (22%), Positives = 226/566 (39%), Gaps = 150/566 (26%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTK-GFALVTFLMPEHATQAYQ 396
RI VRN+ + TE+D+ K +E +G + E+ P K D G + F E A++A
Sbjct: 44 RIIVRNVPFKATEEDVRKFYEPFGQIVEINFP--KRPDGAPLGCCFIQFKQLEQASKAIF 101
Query: 397 HLDGTVFLGRML---------------------HLIPGKPKENEGNVDGKVHCCISERKL 435
+ + LGR++ +L K +N N D + E+
Sbjct: 102 NTNKKELLGRIISSSWAISKSKYYEKIKTESAVNLDADKVDDNNTNEDQTSNKDDGEQGG 161
Query: 436 DAFN-----QVVEARSKRI----------ILVKNLPYRTLPTDLKALFEPFGDLG--RVL 478
D N Q+ R K + I+V+NL ++ +LK F +G++ ++L
Sbjct: 162 DFDNKEKLTQIKRERRKLLKDKNRKKRARIIVRNLAFQVTEENLKDHFSQYGEIEEVKIL 221
Query: 479 VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEV---PLYLEWAPEGVFAEAKEK-SKGKE 534
G FLQ + ++A ++ Y +E+ P+ ++WA AK K SK E
Sbjct: 222 KRSDGKNVGCAFLQFDHVQSAAKAIHYANLQELFDRPIVVDWAV------AKNKFSKNSE 275
Query: 535 KEKNEE---------EGEEGEEEKKENT---AEEDNQQGVPEVE-----------ENVEE 571
E N E EG E E+EK + A + EVE ++ E
Sbjct: 276 NETNGEVKVKIEKDSEGSENEDEKHIDIVTDAHNSDSDDSVEVEIKSENENDASSQDSSE 335
Query: 572 DEEREPEPDT--------------TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
D+E+E + T+++KNL F+ + ++++ ++ GP+ V
Sbjct: 336 DDEKEDTKEIKRPRYESHDVSEGKTIFLKNLPFSVKNEELKKYMEQFGPVYYALVCM--- 392
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQAL----------KVLQ-NSSLDEHQIELK------ 660
P S G FV+F E + L +VL+ +LD+++IE K
Sbjct: 393 --DPLTEYSKGTAFVKFKNVEDAEKCLSAGNELQMQDQVLEAQRALDKNEIENKANLKHQ 450
Query: 661 --RSNRN---------LESEATTVKRKSSNVAK-----QTGSKIL-------------VR 691
+ +RN L +V ++++AK Q S+IL +
Sbjct: 451 RHKDSRNLYLVKEGVILAGSPASVGVSAADMAKRLQIEQWKSQILRNLNMFVSRVRLVIH 510
Query: 692 NIP-------FQAKQSEVEELFKAFGELKFVRLPKK--MVGSGLHRGFGFVEFITKNEAK 742
N+P F+ +E E++ +R K M G G + +GFV F +A
Sbjct: 511 NLPPTLNDVKFKKIVAEYSPRNAVIKEVRIMRDLKNVDMNGVGKSKEYGFVSFTRHEDAL 570
Query: 743 RAMKALCQSTHLYG--RRLVLEWAEE 766
A++ + + +++ RR ++ ++ E
Sbjct: 571 EALRNINNNPNIFTSKRRPIVSFSIE 596
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 116/239 (48%), Gaps = 43/239 (17%)
Query: 439 NQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFLQ 492
+ V E ++ RII V+N+P++ D++ +EPFG + + P P G ++F Q
Sbjct: 35 DNVTEDKTPRII-VRNVPFKATEEDVRKFYEPFGQIVEINFPKRPDGAPLGCC-FIQFKQ 92
Query: 493 KNQA-KAAFNS---------------LAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKE 536
QA KA FN+ ++ +K+ E + E A + + + +++
Sbjct: 93 LEQASKAIFNTNKKELLGRIISSSWAISKSKYYE-KIKTESAVNLDADKVDDNNTNEDQT 151
Query: 537 KNEEEGEEGEEEKKENTAEEDNQQGVPEVE-ENVEEDEEREPEPDTTLYIKNLNFNSTED 595
N+++GE+G + DN++ + +++ E + +++ + + ++NL F TE+
Sbjct: 152 SNKDDGEQG--------GDFDNKEKLTQIKRERRKLLKDKNRKKRARIIVRNLAFQVTEE 203
Query: 596 SIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDE 654
+++ HF + G I V + ++ D K ++G F+QF + + A K + ++L E
Sbjct: 204 NLKDHFSQYGEIEEVKILKRSDGK------NVGCAFLQF---DHVQSAAKAIHYANLQE 253
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 676 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
++ NV + +I+VRN+PF+A + +V + ++ FG++ + PK+ G+ L G F++F
Sbjct: 33 RNDNVTEDKTPRIIVRNVPFKATEEDVRKFYEPFGQIVEINFPKRPDGAPL--GCCFIQF 90
Query: 736 ITKNEAKRAMKALCQST--HLYGRRLVLEWA 764
+ ++A KA+ + L GR + WA
Sbjct: 91 ---KQLEQASKAIFNTNKKELLGRIISSSWA 118
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTF--------LGMAYIGFKDEKNCNKAL-NK 277
I+V+N+P ++D++ +++P V F LG +I FK + +KA+ N
Sbjct: 45 IIVRNVPFKATEEDVRKFYEPFGQI-VEINFPKRPDGAPLGCCFIQFKQLEQASKAIFNT 103
Query: 278 NK---------SFWKGKQLNIYKYSKDNSAKYSGAAD-DNNNASMENIKAKHWKSQEDSV 327
NK S W + Y+ K SA A D+NN + + K Q
Sbjct: 104 NKKELLGRIISSSWAISKSKYYEKIKTESAVNLDADKVDDNNTNEDQTSNKDDGEQGGDF 163
Query: 328 QFAEDIAE----------------SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPID 371
E + + RI VRNL++ VTE++L F +YG + EV + +
Sbjct: 164 DNKEKLTQIKRERRKLLKDKNRKKRARIIVRNLAFQVTEENLKDHFSQYGEIEEVKI-LK 222
Query: 372 KETDKTKGFALVTFLMPEHATQAYQH 397
+ K G A + F + A +A +
Sbjct: 223 RSDGKNVGCAFLQFDHVQSAAKAIHY 248
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 291 KYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTE 350
K +N A +++D+ + IK ++S D++E IF++NL ++V
Sbjct: 321 KSENENDASSQDSSEDDEKEDTKEIKRPRYESH--------DVSEGKTIFLKNLPFSVKN 372
Query: 351 DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
++L K E++GP+ ++ +D T+ +KG A V F E A +
Sbjct: 373 EELKKYMEQFGPVYYALVCMDPLTEYSKGTAFVKFKNVEDAEKC 416
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 167/423 (39%), Gaps = 85/423 (20%)
Query: 25 FIYKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVF 84
+++T+E LK F + G + +V++ ++GK AF+ + A A+ Y N +F
Sbjct: 196 LAFQVTEENLKDHFSQYGEIEEVKILKRSDGKNVGCAFLQFDHVQSAAKAIHYANLQELF 255
Query: 85 SSRIKVEKCSNLGDTTKPKSWSKYAPDSSAYQKLHNIAPKQDLKPEHTKDSKPGKKSKND 144
I V+ +A + + K ++K + KDS+ G +++++
Sbjct: 256 DRPIVVD----------------WAVAKNKFSKNSENETNGEVKVKIEKDSE-GSENEDE 298
Query: 145 PTFSDFLQLHGKDVSKLLPLSNKDGEEKEEENEDESNNQIAHADISDMEYLKLKTKSKDT 204
H D + + E + ENE+++++Q + D + ++K
Sbjct: 299 KHIDIVTDAHNSDSDDSVEV------EIKSENENDASSQDSSEDDEKEDTKEIKR----- 347
Query: 205 APSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAY---FKPLPLASVRTTFL--- 258
P V + TI +KNLP VK ++LK Y F P+ A V L
Sbjct: 348 -------PRYESHDVS--EGKTIFLKNLPFSVKNEELKKYMEQFGPVYYALVCMDPLTEY 398
Query: 259 --GMAYIGFKDEKNCNKALNKNKSFWKGKQL----------------NI-YKYSKDNSAK 299
G A++ FK+ ++ K L+ Q+ N+ ++ KD+
Sbjct: 399 SKGTAFVKFKNVEDAEKCLSAGNELQMQDQVLEAQRALDKNEIENKANLKHQRHKDSRNL 458
Query: 300 Y----------SGAADDNNNASM-ENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTV 348
Y S A+ + A M + ++ + WKSQ ++ R+ + NL T+
Sbjct: 459 YLVKEGVILAGSPASVGVSAADMAKRLQIEQWKSQ--ILRNLNMFVSRVRLVIHNLPPTL 516
Query: 349 TEDDLTKLFEKYGPLAEVILPIDKETD----------KTKGFALVTFLMPEHATQAYQHL 398
+ K+ +Y P VI + D K+K + V+F E A +A +++
Sbjct: 517 NDVKFKKIVAEYSPRNAVIKEVRIMRDLKNVDMNGVGKSKEYGFVSFTRHEDALEALRNI 576
Query: 399 DGT 401
+
Sbjct: 577 NNN 579
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 146/392 (37%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L +LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
+ELF FG V++ M SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KELFGKFGPALSVKV---MTDESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 263
Query: 762 EWAEE 766
A++
Sbjct: 264 GRAQK 268
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|195116106|ref|XP_002002597.1| GI11879 [Drosophila mojavensis]
gi|193913172|gb|EDW12039.1| GI11879 [Drosophila mojavensis]
Length = 724
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 119 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 173
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 174 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 219
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFITKNEAKRAMKALCQS 751
QS++E LF +G++ R+ + +GL +G GF+ F + EA RA+K L +
Sbjct: 220 NMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT 279
Query: 752 T 752
T
Sbjct: 280 T 280
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
I SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 370 ITSSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 429
Query: 392 TQAYQHLDGTVFLGRMLH 409
A Q L+G R+L
Sbjct: 430 VLAIQSLNGYTLGNRVLQ 447
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 126 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 185
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 186 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 220
Query: 459 TLPTDLKALFEPFGDL--GRVLV 479
+DL++LF P+G + R+L
Sbjct: 221 MTQSDLESLFSPYGKIITSRILC 243
>gi|304055|gb|AAA17426.1| RNA-binding protein [Anabaena sp.]
Length = 103
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NLSY VTED L +F +YG + V LP D+ET + +GF V T A + L
Sbjct: 3 VYVGNLSYDVTEDSLNAVFAEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KPKE+
Sbjct: 63 DGAEWMGRDLKVNKAKPKED 82
>gi|17229579|ref|NP_486127.1| RNA-binding protein RbpA2 [Nostoc sp. PCC 7120]
gi|75909339|ref|YP_323635.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|17131178|dbj|BAB73786.1| RNA-binding protein RbpA2 [Nostoc sp. PCC 7120]
gi|75703064|gb|ABA22740.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 103
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NLSY VTED L +F +YG + V LP D+ET + +GF V T A + L
Sbjct: 3 VYVGNLSYDVTEDSLNAVFAEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KPKE+
Sbjct: 63 DGAEWMGRDLKVNKAKPKED 82
>gi|170076900|ref|YP_001733538.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169884569|gb|ACA98282.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 84
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL Y V EDDL ++F YG + V LP+D+ET + +GF V E +A + L
Sbjct: 3 IYVGNLDYAVEEDDLREVFNDYGKVKRVYLPVDRETQRKRGFGFVEMSNDEEEDKAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR + + +P+ N
Sbjct: 63 DGASWMGRDMKVNKARPRTN 82
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T LY+KN+N +T++ + F K GPI S ++ + D K G+GFV + E
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK------LKGFGFVNYEKHEDA 272
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQ 696
+A++ L +S L+ ++ + R+ + E K+ + +AK G + V+N+
Sbjct: 273 VKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDS 332
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
++EE F +G + ++ + +G +GFGFV F T EA +A+ Q + G
Sbjct: 333 VDDEKLEEEFAPYGTITSAKVMR--TENGKSKGFGFVCFSTPEEATKAITEKNQQI-VAG 389
Query: 757 RRLVLEWAEEAD 768
+ L + A+ D
Sbjct: 390 KPLYVAIAQRKD 401
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 158/434 (36%), Gaps = 108/434 (24%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRT-------TFLGMAYIGFKDEKNCNKALNK 277
++ V +L V + L F P+ ++S+R T LG AY+ F D + KA+ +
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N + KG+ I +D S + G S
Sbjct: 99 LNYTPIKGRLCRIMWSQRDPSLRKKG---------------------------------S 125
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G IF++NL + L F +G + + D E K+KGF V F A +A
Sbjct: 126 GNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAID 184
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-ILVKNL 455
L+G + G+ +++ P H ER +Q+ E ++ + VKN+
Sbjct: 185 ALNGMLLNGQEIYVAP--------------HLSRKERD----SQLEETKAHYTNLYVKNI 226
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYTKFKE 510
T + LF FG + + G V + + A A +L ++
Sbjct: 227 NSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNG 286
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
LY+ G+ ++KNE ++ + + QGV
Sbjct: 287 EKLYV----------------GRAQKKNERMHVLKKQYEAYRLEKMAKYQGV-------- 322
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
L++KNL+ + ++ + F G I S V R ++ K S G+G
Sbjct: 323 -----------NLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGK------SKGFG 365
Query: 631 FVQFYTRESLNQAL 644
FV F T E +A+
Sbjct: 366 FVCFSTPEEATKAI 379
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L + +E + F G ++S+ V R K+ S+GY +V F E+
Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT-----SLGYAYVNFNDHEAG 92
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A++ L + + + S R+ ++++K S I ++N+
Sbjct: 93 RKAIEQLNYTPIKGRLCRIMWSQRD-----PSLRKKGS-------GNIFIKNLHPDIDNK 140
Query: 701 EVEELFKAFGELKFVRLPKKMVG--SGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F FG++ L K+ +G +GFGFV F + AK A+ AL
Sbjct: 141 ALYDTFSVFGDI----LSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV+NL +V ++ L + F YG + + + E K+KGF V F PE AT+A
Sbjct: 324 LFVKNLDDSVDDEKLEEEFAPYGTITSAKV-MRTENGKSKGFGFVCFSTPEEATKAITEK 382
Query: 399 DGTVFLGRMLHL 410
+ + G+ L++
Sbjct: 383 NQQIVAGKPLYV 394
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T LY+KN+N +T++ + F K GPI S ++ + D K G+GFV + E
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK------LKGFGFVNYEKHEDA 272
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQ 696
+A++ L +S L+ ++ + R+ + E K+ + +AK G + V+N+
Sbjct: 273 VKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDS 332
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
++EE F +G + ++ + +G +GFGFV F T EA +A+ Q + G
Sbjct: 333 VDDEKLEEEFAPYGTITSAKVMR--TENGKSKGFGFVCFSTPEEATKAITEKNQQI-VAG 389
Query: 757 RRLVLEWAEEAD 768
+ L + A+ D
Sbjct: 390 KPLYVAIAQRKD 401
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 158/434 (36%), Gaps = 108/434 (24%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRT-------TFLGMAYIGFKDEKNCNKALNK 277
++ V +L V + L F P+ ++S+R T LG AY+ F D + KA+ +
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N + KG+ I +D S + G S
Sbjct: 99 LNYTPIKGRLCRIMWSQRDPSLRKKG---------------------------------S 125
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G IF++NL + L F +G + + D E K+KGF V F A +A
Sbjct: 126 GNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAID 184
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-ILVKNL 455
L+G + G+ +++ P H ER +Q+ E ++ + VKN+
Sbjct: 185 ALNGMLLNGQEIYVAP--------------HLSRKERD----SQLEETKAHYTNLYVKNI 226
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYTKFKE 510
T + LF FG + + G V + + A A +L ++
Sbjct: 227 NSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNG 286
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
LY+ G+ ++KNE ++ + + QGV
Sbjct: 287 EKLYV----------------GRAQKKNERMHVLKKQYEAYRLEKMAKYQGV-------- 322
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
L++KNL+ + ++ + F G I S V R ++ K S G+G
Sbjct: 323 -----------NLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGK------SKGFG 365
Query: 631 FVQFYTRESLNQAL 644
FV F T E +A+
Sbjct: 366 FVCFSTPEEATKAI 379
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L + +E + F G ++S+ V R K+ S+GY +V F E+
Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT-----SLGYAYVNFNDHEAG 92
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A++ L + + + S R+ ++++K S I ++N+
Sbjct: 93 RKAIEQLNYTPIKGRLCRIMWSQRD-----PSLRKKGS-------GNIFIKNLHPDIDNK 140
Query: 701 EVEELFKAFGELKFVRLPKKMVG--SGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F FG++ L K+ +G +GFGFV F + AK A+ AL
Sbjct: 141 ALYDTFSVFGDI----LSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV+NL +V ++ L + F YG + + + E K+KGF V F PE AT+A
Sbjct: 324 LFVKNLDDSVDDEKLEEEFAPYGTITSAKV-MRTENGKSKGFGFVCFSTPEEATKAITEK 382
Query: 399 DGTVFLGRMLHL 410
+ + G+ L++
Sbjct: 383 NQQIVAGKPLYV 394
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 146/392 (37%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L +LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN-------GSKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
+ELF FG V++ M SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KELFGKFGPALSVKV---MTDESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 263
Query: 762 EWAEE 766
A++
Sbjct: 264 GRAQK 268
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDEGGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 145/392 (36%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L +LF K+GP V + D E K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-EGGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN-------GSKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
+ELF FG V++ M G +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KELFGKFGPALSVKV---MTDEGGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 263
Query: 762 EWAEE 766
A++
Sbjct: 264 GRAQK 268
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|158335765|ref|YP_001516937.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461305|ref|ZP_09249868.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158306006|gb|ABW27623.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+++ NLSY VTEDDL+ +F +YG + +V LP+D+E+ + +GF V + +A + L
Sbjct: 3 VYIGNLSYEVTEDDLSAVFAEYGEVKQVKLPVDRESGRKRGFGFVEMQDESNEEKAIEEL 62
Query: 399 DGTVFLGRMLHLIPGKPK 416
DG ++GR L + KP+
Sbjct: 63 DGAEWMGRTLKVNKAKPR 80
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
+ + N+ ++ + ++ +F +GE+K V+LP SG RGFGFVE ++ ++A++
Sbjct: 3 VYIGNLSYEVTEDDLSAVFAEYGEVKQVKLPVDRE-SGRKRGFGFVEMQDESNEEKAIEE 61
Query: 748 LCQSTHLYGRRL 759
L GR L
Sbjct: 62 L-DGAEWMGRTL 72
>gi|367042708|ref|XP_003651734.1| hypothetical protein THITE_2112338 [Thielavia terrestris NRRL 8126]
gi|346998996|gb|AEO65398.1| hypothetical protein THITE_2112338 [Thielavia terrestris NRRL 8126]
Length = 325
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+++++NL F TE+ +++ F K G +AS +AR DP+ LS G+GFV F T E++
Sbjct: 132 SVFVRNLVFEVTEEHLQKAFSKYGEVASTFIAR--DPRG----LSKGFGFVTFTTPEAVE 185
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE 701
A + S +I R + VK+ + + T +++ + NIP++ +E
Sbjct: 186 TACSQVNGSFWHGRRITCVRRT---QPAPAGVKKPAKSPPGPT-AQLFIGNIPYETTDAE 241
Query: 702 VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
+ LF+ L+ VR+ +G RGF +F + A A K L + T L R L +
Sbjct: 242 LNRLFRGIENLRDVRVAVDRT-TGWPRGFAHADFTSIEAAIEAKKRL-EGTMLGNRLLRV 299
Query: 762 EWA 764
++A
Sbjct: 300 DFA 302
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
A++I S +FVRNL + VTE+ L K F KYG +A + D +KGF VTF PE
Sbjct: 126 AQEIQNS--VFVRNLVFEVTEEHLQKAFSKYGEVASTFIARDPR-GLSKGFGFVTFTTPE 182
Query: 390 HATQAYQHLDGTVFLGRMLHLI 411
A ++G+ + GR + +
Sbjct: 183 AVETACSQVNGSFWHGRRITCV 204
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 37/196 (18%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKDEKNCNKAL 275
+++ V+NL V ++ L+ F V +TF+ G ++ F + A
Sbjct: 131 NSVFVRNLVFEVTEEHLQKAFSKY--GEVASTFIARDPRGLSKGFGFVTFTTPEAVETAC 188
Query: 276 NK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
++ N SFW G+++ + ++ A A + +
Sbjct: 189 SQVNGSFWHGRRITCVRRTQPAPAGVKKPAKSPPGPTAQ--------------------- 227
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
+F+ N+ Y T+ +L +LF L +V + +D+ T +GFA F E A +A
Sbjct: 228 ----LFIGNIPYETTDAELNRLFRGIENLRDVRVAVDRTTGWPRGFAHADFTSIEAAIEA 283
Query: 395 YQHLDGTVFLGRMLHL 410
+ L+GT+ R+L +
Sbjct: 284 KKRLEGTMLGNRLLRV 299
>gi|351705901|gb|EHB08820.1| Polyadenylate-binding protein 5 [Heterocephalus glaber]
Length = 382
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 155/411 (37%), Gaps = 80/411 (19%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
V +L VTED L K F GPL + D T G+ V F P A A ++
Sbjct: 22 VGDLDADVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 401 TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTL 460
+ G+ L+ +P + RK N I +KNL
Sbjct: 82 DLINGKPFRLMWSQPDDRL-------------RKSGVGN----------IFIKNLDKSID 118
Query: 461 PTDLKALFEPFGDL--GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
L LF FG++ +V+ G K A F+SLA W
Sbjct: 119 NRGLFYLFSAFGNILSCKVVCDDNG--------SKGYAYVHFDSLAAAN------RAIWH 164
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
GV ++ G+ K PE E E R+
Sbjct: 165 MNGVRLNNRQVYVGRFK--------------------------FPE--ERAAEVRTRDRA 196
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +++KNL + ++ ++ F + G I SV V R KS G +GFV++ T E
Sbjct: 197 TFTNVFVKNLGDDMNDEKLKELFSEYGQIESVKVVRDASGKSKG------FGFVKYETHE 250
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT----GSKILVRNIP 694
+ +A+ L S+D + + R+ + +E A +R K+ G I ++N+
Sbjct: 251 AAQKAVLELHGKSMDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLD 310
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+++E F +FG + K M+ G +GFG V F + EA +A+
Sbjct: 311 ESIDDEKLKEEFSSFGS---ISRAKVMMEVGQGKGFGVVCFSSFEEATKAV 358
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + + F G I S V + S GY +V F + + N+
Sbjct: 108 IFIKNLDKSIDNRGLFYLFSAFGNILSCKVVCDDNG-------SKGYAYVHFDSLAAANR 160
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A+ + L+ Q+ + R + E A V+ + + T + + V+N+ ++
Sbjct: 161 AIWHMNGVRLNNRQVYVGRF-KFPEERAAEVRTRD----RATFTNVFVKNLGDDMNDEKL 215
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ELF +G+++ V++ + SG +GFGFV++ T A++A+ L
Sbjct: 216 KELFSEYGQIESVKVVRD--ASGKSKGFGFVKYETHEAAQKAVLEL 259
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 26/175 (14%)
Query: 585 IKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ +L+ + TED + + F+ GP+ + R +SP +GYG+V F AL
Sbjct: 22 VGDLDADVTEDMLYKKFRPAGPLRFTRICRDPVTRSP-----LGYGYVNFRFPADAEWAL 76
Query: 645 KVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ ++ L + S+ RKS I ++N+ +
Sbjct: 77 NTMNFDLINGKPFRL------MWSQPDDRLRKSGV------GNIFIKNLDKSIDNRGLFY 124
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
LF AFG + ++ GS +G+ +V F + A RA+ H+ G RL
Sbjct: 125 LFSAFGNILSCKVVCDDNGS---KGYAYVHFDSLAAANRAI------WHMNGVRL 170
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+++NL ++ ++ L + F +G ++ + + E + KGF +V F E AT+A +
Sbjct: 304 IYIKNLDESIDDEKLKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEM 361
Query: 399 DGTVFLGRMLHLIPGKPK 416
+G + + LH+ G+ +
Sbjct: 362 NGRLVGSKALHVTLGQVR 379
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D A +FV+NL + ++ L +LF +YG + V + D + K+KGF V + E A
Sbjct: 194 DRATFTNVFVKNLGDDMNDEKLKELFSEYGQIESVKVVRD-ASGKSKGFGFVKYETHEAA 252
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A L G G++L++
Sbjct: 253 QKAVLELHGKSMDGKVLYV 271
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T LY+KN+N +T++ + F K GPI S ++ + D K G+GFV + E
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK------LKGFGFVNYEKHEDA 272
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQ 696
+A++ L +S L+ ++ + R+ + E K+ + +AK G + V+N+
Sbjct: 273 VKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDS 332
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
++EE F +G + ++ + +G +GFGFV F T EA +A+ Q + G
Sbjct: 333 VDDEKLEEEFAPYGTITSAKVMR--TENGKSKGFGFVCFSTPEEATKAITEKNQQI-VAG 389
Query: 757 RRLVLEWAEEAD 768
+ L + A+ D
Sbjct: 390 KPLYVAIAQRKD 401
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 158/434 (36%), Gaps = 108/434 (24%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRT-------TFLGMAYIGFKDEKNCNKALNK 277
++ V +L V + L F P+ ++S+R T LG AY+ F D + KA+ +
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N + KG+ I +D S + G S
Sbjct: 99 LNYTPIKGRLCRIMWSQRDPSLRKKG---------------------------------S 125
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G IF++NL + L F +G + + D E K+KGF V F A +A
Sbjct: 126 GNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAID 184
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-ILVKNL 455
L+G + G+ +++ P H ER +Q+ E ++ + VKN+
Sbjct: 185 ALNGMLLNGQEIYVAP--------------HLSRKERD----SQLEETKAHYTNLYVKNI 226
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYTKFKE 510
T + LF FG + + G V + + A A +L ++
Sbjct: 227 NSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNG 286
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
LY+ G+ ++KNE ++ + + QGV
Sbjct: 287 EKLYV----------------GRAQKKNERMHVLKKQYEAYRLEKMAKYQGV-------- 322
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
L++KNL+ + ++ + F G I S V R ++ K S G+G
Sbjct: 323 -----------NLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGK------SKGFG 365
Query: 631 FVQFYTRESLNQAL 644
FV F T E +A+
Sbjct: 366 FVCFSTPEEATKAI 379
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L + +E + F G ++S+ V R K+ S+GY +V F E+
Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT-----SLGYAYVNFNDHEAG 92
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A++ L + + + S R+ ++++K S I ++N+
Sbjct: 93 RKAIEQLNYTPIKGRLCRIMWSQRD-----PSLRKKGS-------GNIFIKNLHPDIDNK 140
Query: 701 EVEELFKAFGELKFVRLPKKMVG--SGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F FG++ L K+ +G +GFGFV F + AK A+ AL
Sbjct: 141 ALYDTFSVFGDI----LSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV+NL +V ++ L + F YG + + + E K+KGF V F PE AT+A
Sbjct: 324 LFVKNLDDSVDDEKLEEEFAPYGTITSAKV-MRTENGKSKGFGFVCFSTPEEATKAITEK 382
Query: 399 DGTVFLGRMLHL 410
+ + G+ L++
Sbjct: 383 NQQIVAGKPLYV 394
>gi|255715381|ref|XP_002553972.1| KLTH0E11418p [Lachancea thermotolerans]
gi|238935354|emb|CAR23535.1| KLTH0E11418p [Lachancea thermotolerans CBS 6340]
Length = 693
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 154/355 (43%), Gaps = 69/355 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR++ + T+++LT F + P+ ++ D E + ++GF V+F + + A +
Sbjct: 23 LFVRSIPFEATDEELTNYFSELAPIKHAVIVKDNEKN-SRGFGFVSFAVEDDTKDALEKA 81
Query: 399 DGTVFLGRMLHLIPGKPKENE-------------GNVDGKVHCCISERKLDAFNQVVEAR 445
T F GR+L + K +E GNV+ K N+++ +
Sbjct: 82 RKTKFKGRLLRVDIAKRRERSKGDQRSSSSSEQAGNVENKE------------NELMGGK 129
Query: 446 SKRIILVKNLPYRTL-PTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLA 504
K ++++N+P+ P LK +F FG + +P L F K A A
Sbjct: 130 PK--LIIRNMPWSVRKPEQLKQIFMRFGTVVEAKIPKKPDGKLCGFAFVTMKKLAACKKA 187
Query: 505 YTKFKEVPL---------------YLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEK 549
K++ + + ++ E V + + +S+ + + +E GEEG +
Sbjct: 188 IEDSKDLKIDGRQVAVDFAIQKNKWEDYKKENVAEKVESESESESEIDKQEAGEEGSSNE 247
Query: 550 KENTAEEDNQQGVPEVEENVEEDEERE----------------PEPDT----TLYIKNLN 589
+EDN+ G + + + +E+ E P+P+ +++++N+
Sbjct: 248 ASEAEDEDNENGSEDEDSDANSEEDEEMDSEEEEDQSPGSQNWPKPNKHEQLSVFVRNVP 307
Query: 590 FNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+++T++S+ HF K GP+ + K+ L+ G FV F ++++ ++ +
Sbjct: 308 YDATQESLEEHFGKFGPVKYALPVQDKETG-----LAKGSAFVVFKSKDAFDECV 357
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 100/205 (48%), Gaps = 20/205 (9%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY----TR 637
TL+++++ F +T++ + +F + PI + + + S G+GFV F T+
Sbjct: 22 TLFVRSIPFEATDEELTNYFSELAPIKHAVIVKDNEKNS------RGFGFVSFAVEDDTK 75
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGS------KILVR 691
++L +A K L I +R + +++ ++ NV + K+++R
Sbjct: 76 DALEKARKTKFKGRLLRVDIAKRRERSKGDQRSSSSSEQAGNVENKENELMGGKPKLIIR 135
Query: 692 NIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQ 750
N+P+ ++ E ++++F FG + ++PKK G GF FV K+A++ +
Sbjct: 136 NMPWSVRKPEQLKQIFMRFGTVVEAKIPKKPDGKLC--GFAFVTMKKLAACKKAIED-SK 192
Query: 751 STHLYGRRLVLEWAEEADNVEDIRK 775
+ GR++ +++A + + ED +K
Sbjct: 193 DLKIDGRQVAVDFAIQKNKWEDYKK 217
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPI-DKETDKTKGFALVTFL----------- 386
+FVRN+ Y T++ L + F K+GP+ + LP+ DKET KG A V F
Sbjct: 301 VFVRNVPYDATQESLEEHFGKFGPV-KYALPVQDKETGLAKGSAFVVFKSKDAFDECVNN 359
Query: 387 MPEHATQAYQHLDGT----VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
P T + D V+ GR+L + P +E G S+RK +AF +
Sbjct: 360 APASGTTSLLMSDDVPYRYVYEGRILSIAPALDRETAGRF---AERNASKRK-EAFGKAP 415
Query: 443 EARSKRIILVKN 454
A+ KR + + N
Sbjct: 416 TAKDKRNLYLLN 427
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
+ VRN+P+ A Q +EE F FG +K+ LP + +GL +G FV F +K+
Sbjct: 301 VFVRNVPYDATQESLEEHFGKFGPVKYA-LPVQDKETGLAKGSAFVVFKSKD 351
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 146/392 (37%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L +LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
+ELF FG V++ SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KELFGKFGPALSVKVMTD--ESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYVG 264
Query: 763 WAEE 766
A++
Sbjct: 265 RAQK 268
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 146/392 (37%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L +LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
+ELF FG V++ M SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KELFGKFGPALSVKV---MTDESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 263
Query: 762 EWAEE 766
A++
Sbjct: 264 GRAQK 268
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIKKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA+K +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIKKM 158
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A+K + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIKKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
+ELF FG V++ M SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KELFGKFGPALSVKV---MTDESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 263
Query: 762 EWAEE 766
A++
Sbjct: 264 GRAQK 268
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 26/191 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++++N + ++ L +LF K+GP V + D E+ K+KGF V+F E A +A +
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA---FNQVVEARSKRI----IL 451
+G G+ +++ G KV ER+ + F Q+ + R R +
Sbjct: 252 NGKELNGKQIYV---------GRAQKKV-----ERQTELKRKFEQMKQDRITRYQGVNLY 297
Query: 452 VKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTK 507
VKNL L+ F PFG + V G G V F +A A +
Sbjct: 298 VKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 508 FKEVPLYLEWA 518
PLY+ A
Sbjct: 358 VATKPLYVALA 368
>gi|346322022|gb|EGX91621.1| ribosome biogenesis protein Nop4 [Cordyceps militaris CM01]
Length = 818
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 15/188 (7%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+L++++L N T +S+ F + P+ TV + K S G+GFV +
Sbjct: 43 SLFVRSLPPNVTNESLAEFFSEYFPVKHATVVVDQQTKE-----SRGFGFVTLADADDAK 97
Query: 642 QALKVLQNSSLDEHQIELK----RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
QA VL + I ++ R + L +E ++K + K++VRN+P+
Sbjct: 98 QAQTVLDKKQWEGRSIRVEVAEPRQRKEL-AEGAERRQKPGKPEFEPTPKLIVRNLPWSI 156
Query: 698 KQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
+ SE + LF+++G +KF LPK G +GFGFV K A+ A++ + + G
Sbjct: 157 RNSEQLGHLFRSYGRIKFADLPKD---KGKLKGFGFVTLRGKKNAENALEGV-NGKEIDG 212
Query: 757 RRLVLEWA 764
R L ++WA
Sbjct: 213 RTLAVDWA 220
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 13/185 (7%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L VT + L + F +Y P+ + +D++T +++GF VT + A QA L
Sbjct: 44 LFVRSLPPNVTNESLAEFFSEYFPVKHATVVVDQQTKESRGFGFVTLADADDAKQAQTVL 103
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
D + GR + + +P++ + +G +ER+ E K ++V+NLP+
Sbjct: 104 DKKQWEGRSIRVEVAEPRQRKELAEG------AERRQKPGKPEFEPTPK--LIVRNLPWS 155
Query: 459 TLPTD-LKALFEPFGDLGRVLVPP-YGITGLVEFLQKNQAKAAFNSLAYTKFKEV---PL 513
++ L LF +G + +P G F+ K A N+L KE+ L
Sbjct: 156 IRNSEQLGHLFRSYGRIKFADLPKDKGKLKGFGFVTLRGKKNAENALEGVNGKEIDGRTL 215
Query: 514 YLEWA 518
++WA
Sbjct: 216 AVDWA 220
>gi|19173032|ref|NP_597583.1| NUCLEOLAR PROTEIN OF THE GAR FAMILY [Encephalitozoon cuniculi
GB-M1]
gi|449329681|gb|AGE95951.1| nucleolar protein of the gar family [Encephalitozoon cuniculi]
Length = 293
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 27/142 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F++ +SY +TE DL EK G +A V +P+ + + KGF V F E +A + L
Sbjct: 89 VFIKGISYDLTEYDLKSEMEKIGKVARVGIPMTNDHKRNKGFGYVEFCKEEDVKKALK-L 147
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
DGTVFLGR + + P+ N + + I V N+PY
Sbjct: 148 DGTVFLGREVVVNMAHPRAN--------------------------KERHTIYVSNIPYE 181
Query: 459 TLPTDLKALFEPFGDLGRVLVP 480
DLK FE G++ + +P
Sbjct: 182 CDKRDLKKYFEGMGEVVGMSLP 203
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
+E R P T++IK ++++ TE ++ +K G +A V + D K + G+G+
Sbjct: 78 EESRRENPSLTVFIKGISYDLTEYDLKSEMEKIGKVARVGIPMTNDHKR-----NKGFGY 132
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
V+F E + +ALK+ L + + +N + T I V
Sbjct: 133 VEFCKEEDVKKALKLDGTVFLGREVV-------------VNMAHPRANKERHT---IYVS 176
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA--LC 749
NIP++ + ++++ F+ GE+ + LP + L +G+GFV+F K + +R +K +
Sbjct: 177 NIPYECDKRDLKKYFEGMGEVVGMSLPYDRDNNRL-KGYGFVDFGNKEDYERVLKKKLVF 235
Query: 750 QSTHLYGRRLVLEWAEEADNVEDIRKRTNRYF 781
+ + +Y R +N ED R R F
Sbjct: 236 EDSTMYHRPAY------KNNREDRRDSNGRGF 261
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF 385
I+V N+ Y + DL K FE G + + LP D++ ++ KG+ V F
Sbjct: 173 IYVSNIPYECDKRDLKKYFEGMGEVVGMSLPYDRDNNRLKGYGFVDF 219
>gi|67605110|ref|XP_666661.1| cutinase negative acting protein [Cryptosporidium hominis TU502]
gi|54657695|gb|EAL36429.1| cutinase negative acting protein [Cryptosporidium hominis]
Length = 475
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 31/209 (14%)
Query: 556 EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARK 615
+DN Q P +N + RE +Y NL ++ TE+ IR F++CG I V+V
Sbjct: 254 DDNSQ--PRKRQNTNNKDSRE------VYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD 305
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR 675
K G F+ F E A++ Q E++ + R N + + +
Sbjct: 306 K-----------GCAFITFEQEEGAKSAIQWNQT----EYKGRMLRINMSADKP-----Q 345
Query: 676 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
S + G ++VRNIPF + ++ F G +K V +P + +G RGF VEF
Sbjct: 346 PGSLSSGGYGPSVIVRNIPFSSDDESIKSFFNGCGVVKRVSIP-RYSDTGKMRGFAMVEF 404
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+ + A+K T + GR + +E A
Sbjct: 405 ENDEQIQNALK--LSGTSMNGREVTIEIA 431
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 33/190 (17%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
+S ++ NL Y+ TE+++ LFE+ G + V + D KG A +TF E A A
Sbjct: 269 DSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD------KGCAFITFEQEEGAKSA 322
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKN 454
Q + T + GRML + K G++ + ++V+N
Sbjct: 323 IQ-WNQTEYKGRMLRINMSADKPQPGSLSSGGY-------------------GPSVIVRN 362
Query: 455 LPYRTLPTDLKALFEPFGDLGRVLVPPYGITG------LVEFLQKNQAKAAFNSLAYTKF 508
+P+ + +K+ F G + RV +P Y TG +VEF Q + A L+ T
Sbjct: 363 IPFSSDDESIKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNAL-KLSGTSM 421
Query: 509 KEVPLYLEWA 518
+ +E A
Sbjct: 422 NGREVTIEIA 431
>gi|300796236|ref|NP_001179218.1| polyadenylate-binding protein 5 [Bos taurus]
gi|296471041|tpg|DAA13156.1| TPA: poly(A) binding protein, cytoplasmic 5 [Bos taurus]
gi|440903676|gb|ELR54310.1| Polyadenylate-binding protein 5 [Bos grunniens mutus]
Length = 382
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 155/414 (37%), Gaps = 80/414 (19%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
V +L VTED L K F GPL + D T G+ V F P A A ++
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 401 TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTL 460
+ G+ L+ +P + RK N I +KNL
Sbjct: 82 DLINGKPFRLMWSQPDDRL-------------RKSGIGN----------IFIKNLDKSID 118
Query: 461 PTDLKALFEPFGDL--GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
L LF FG + +V+ G K A F+SLA W
Sbjct: 119 NRALFYLFSAFGSILSCKVVCDDNG--------SKGYAYVHFDSLAAAN------RAIWH 164
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
GV ++ G+ K PE E E R+
Sbjct: 165 MNGVRLNNRQVYVGRFK--------------------------FPE--ERAAEVRTRDKA 196
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +++KN + +D ++ F + GP SV V R KS G+GFV++ T E
Sbjct: 197 TFTNVFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDSSGKSK------GFGFVRYETHE 250
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT----GSKILVRNIP 694
+ +A+ L S+D + + R+ + +E A +R K+ G I ++N+
Sbjct: 251 AAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLD 310
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+++E F +FG + ++ MV G +GFG + F + EA +A+ +
Sbjct: 311 ETIDDEKLKEEFSSFGSISRAKV---MVEVGQGKGFGVICFSSFEEATKAVDEM 361
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D A +FV+N + +D L +LF +YGP E + I + K+KGF V + E A
Sbjct: 194 DKATFTNVFVKNFGDDMDDDKLKELFSEYGP-TESVKVIRDSSGKSKGFGFVRYETHEAA 252
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A L G G++L++
Sbjct: 253 QKAVLDLHGKSIDGKVLYV 271
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 26/175 (14%)
Query: 585 IKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ +L+ + TED + + F+ GP+ + R +SP +GYG+V F AL
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSP-----LGYGYVNFRFPADAEWAL 76
Query: 645 KVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ ++ L + S+ RKS I ++N+ +
Sbjct: 77 NTMNFDLINGKPFRL------MWSQPDDRLRKSGI------GNIFIKNLDKSIDNRALFY 124
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
LF AFG + ++ GS +G+ +V F + A RA+ H+ G RL
Sbjct: 125 LFSAFGSILSCKVVCDDNGS---KGYAYVHFDSLAAANRAI------WHMNGVRL 170
>gi|298707925|emb|CBJ30311.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 351
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 26/196 (13%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY----TR 637
T+Y++ + + E +R FK CG I V + R +D P GY V F R
Sbjct: 130 TVYVEGIPWTCDESDVREFFKGCGKITDVRMPRWQDSGRP-----RGYAHVAFAGSSGAR 184
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLES---EATTVKRKSSNVAKQ-TGSK-ILVRN 692
+ + + L L QI ++ +N L++ AT R+++ A+Q TG + + V+N
Sbjct: 185 AAFGRDGQYLNGRYLTVQQITVESNNHALQAPQEPATEKARRANRKAEQPTGCRTVFVKN 244
Query: 693 IPFQAKQSEVEELFKAFGELKFVRLP-----KKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
+P+ + V E G + VRL +K+ +GFG+VEF T+ A+ ++
Sbjct: 245 LPYDVDEDAVSEALAGCGRIASVRLAMWNHTRKL------KGFGYVEFSTERGAETCVRT 298
Query: 748 LCQSTHLYGRRLVLEW 763
Q+ + GR LV+++
Sbjct: 299 Q-QNLSIGGRPLVVDF 313
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 29/203 (14%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V + +T E D+ + F+ G + +V +P +++ + +G+A V F A A+
Sbjct: 131 VYVEGIPWTCDESDVREFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGR- 189
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCC------ISERKLDAFNQVVEARSKRIILV 452
DG GR L + + V+ H +E+ A + + R + V
Sbjct: 190 DGQYLNGRYLTV-------QQITVESNNHALQAPQEPATEKARRANRKAEQPTGCRTVFV 242
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT---------GLVEFLQKNQAKAAFNSL 503
KNLPY D A+ E GR+ + G VEF + A+ +
Sbjct: 243 KNLPY---DVDEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQ 299
Query: 504 AYTKFKEVPLYLEW---APEGVF 523
PL +++ AP+G F
Sbjct: 300 QNLSIGGRPLVVDFETGAPKGSF 322
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 19/168 (11%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLP-LASVRTTFL-------GMAYIGFKDEKNCNKALNK 277
T+ V+ +P + D++ +FK + VR G A++ F A +
Sbjct: 130 TVYVEGIPWTCDESDVREFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGR 189
Query: 278 NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESG 337
+ + G+ L + + + ++ NN +++ + + + + AE
Sbjct: 190 DGQYLNGRYLTVQQITVES-----------NNHALQAPQEPATEKARRANRKAEQPTGCR 238
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF 385
+FV+NL Y V ED +++ G +A V L + T K KGF V F
Sbjct: 239 TVFVKNLPYDVDEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEF 286
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 15/187 (8%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
++++ L++N ++ ++ F + G + S AR + + G+ S G+G+V+F S
Sbjct: 273 SIFVGRLSWNVDDEWLKTEFAEAGEVVS---ARVQMDRQTGK--SKGFGYVEFADAASAK 327
Query: 642 QALKVLQNSSLDEHQIELK----RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
+A++ + +D + L R N E A S + + + V N+ F A
Sbjct: 328 KAVETMNGREIDGRPVNLDLATPRGPPNPERRAKAFGDSRS----EPSATLFVGNLAFSA 383
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
Q V ELF A GE+ VRLP SG +GFG+VEF A +A+ L T GR
Sbjct: 384 TQDAVYELFGAVGEVVNVRLPTDR-DSGQPKGFGYVEFADVETASKALNELG-GTDFEGR 441
Query: 758 RLVLEWA 764
+ L+++
Sbjct: 442 NIRLDFS 448
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +FV NL+++ T+D + +LF G + V LP D+++ + KGF V F E A++A
Sbjct: 371 SATLFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSGQPKGFGYVEFADVETASKAL 430
Query: 396 QHLDGTVFLGRMLHL 410
L GT F GR + L
Sbjct: 431 NELGGTDFEGRNIRL 445
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 332 DIAESGR----IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
D AE G IFV LS+ V ++ L F + G + + +D++T K+KGF V F
Sbjct: 263 DGAEGGEEVKSIFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFAD 322
Query: 388 PEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSK 447
A +A + ++G GR ++L P+ ER+ AF ++RS+
Sbjct: 323 AASAKKAVETMNGREIDGRPVNLDLATPR----------GPPNPERRAKAFG---DSRSE 369
Query: 448 --RIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKA 498
+ V NL + + LF G++ V +P P G G VEF A
Sbjct: 370 PSATLFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSGQPKGF-GYVEFADVETASK 428
Query: 499 AFNSLAYTKFKEVPLYLEWA 518
A N L T F+ + L+++
Sbjct: 429 ALNELGGTDFEGRNIRLDFS 448
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 560 QGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
+G P E + + EP TL++ NL F++T+D++ F G + +V + +D
Sbjct: 351 RGPPNPERRAKAFGDSRSEPSATLFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSG 410
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
P G+G+V+F E+ ++AL L + + I L
Sbjct: 411 QP-----KGFGYVEFADVETASKALNELGGTDFEGRNIRL 445
>gi|301120388|ref|XP_002907921.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
gi|262102952|gb|EEY61004.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
Length = 640
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 189/505 (37%), Gaps = 121/505 (23%)
Query: 249 PLASVRTT-------FLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKY 300
P+AS+R LG AY+ F + + +AL+ N + KG I +D S +
Sbjct: 70 PVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRK 129
Query: 301 SGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
SG G IFV+NL ++ L F +
Sbjct: 130 SGV---------------------------------GNIFVKNLDTSIDNKALYDTFSLF 156
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
G + + I+ T +KG+ V + E AT+A ++G + G + + + +++
Sbjct: 157 GNILSCKVAIEHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGQFQKRQDRP 216
Query: 421 NVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV- 479
+ D +C VKN+P + DL FEPFG + +V
Sbjct: 217 DADDWTNC----------------------YVKNIPTQWTDADLLKEFEPFGKVLSAVVM 254
Query: 480 -----PPYGIT-GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGK 533
P + G V + + + A A ++L + A EG+ E K
Sbjct: 255 KDNANPDHNRGFGFVNYEESDAAHKAVDALNGKSYP--------AGEGLDTEMYVGKAQK 306
Query: 534 EKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNST 593
E+ E + E+ K E + QGV LY+KNL+ +
Sbjct: 307 RSERERELRNKFEQLKMERI---NKYQGV-------------------NLYVKNLDDQLS 344
Query: 594 EDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLD 653
+D +R F +CG I S V R DP S G+GFV F T E N+A+ + +
Sbjct: 345 DDELREAFAECGTITSSRVMR--DPNG----NSRGFGFVCFSTPEEANKAVAEMNGKLIS 398
Query: 654 EHQIELKRSNRNLESEATTVKRKS--SNVAKQTGSKILVRNIPF-QAKQSEVEELFKA-F 709
+ + + R V+R + A+Q ++ R +P Q +F
Sbjct: 399 GKPVYVALAQRK------EVRRAQLEAQHAQQRAGMVVGRGMPMGQPPMYGAAPMFYGQP 452
Query: 710 GEL-----KFVRLPKKMVGSGLHRG 729
G+L + P++M+ G+ RG
Sbjct: 453 GQLPPQARQGFMYPQQMMPRGVQRG 477
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 19/193 (9%)
Query: 569 VEEDEEREPEPD----TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
V + ++R+ PD T Y+KN+ T+ + + F+ G + S V KD +P
Sbjct: 206 VGQFQKRQDRPDADDWTNCYVKNIPTQWTDADLLKEFEPFGKVLSAVVM--KDNANPDH- 262
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSS------LDEHQI---ELKRSNRNLESEATTVKR 675
+ G+GFV + ++ ++A+ L S LD KRS R E +
Sbjct: 263 -NRGFGFVNYEESDAAHKAVDALNGKSYPAGEGLDTEMYVGKAQKRSERERELRNKFEQL 321
Query: 676 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
K + K G + V+N+ Q E+ E F G + R+ + G+ RGFGFV F
Sbjct: 322 KMERINKYQGVNLYVKNLDDQLSDDELREAFAECGTITSSRVMRDPNGN--SRGFGFVCF 379
Query: 736 ITKNEAKRAMKAL 748
T EA +A+ +
Sbjct: 380 STPEEANKAVAEM 392
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 18/160 (11%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
+P +LY+ +++ + TE + F GP+AS+ V R + S+GY +V F+
Sbjct: 40 QPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRR-----SLGYAYVNFH 94
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+AL + +S+ + S R+ ++ K I V+N+
Sbjct: 95 NVADAERALDTMNFTSIKGVPCRIMWSQRD------------PSLRKSGVGNIFVKNLDT 142
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
+ + F FG + ++ + +G +G+G+V +
Sbjct: 143 SIDNKALYDTFSLFGNILSCKVAIEHT-TGNSKGYGYVHY 181
>gi|406868018|gb|EKD21055.1| RNA binding domain containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 426
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 14/188 (7%)
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
P P ++Y+ NL F+ T++ I+R F+ GPI SVT+A S + LS G+G+V+F +
Sbjct: 227 PAPSNSIYVGNLLFDITQEDIQREFESFGPIKSVTIA------SDNRGLSKGFGYVEFES 280
Query: 637 RESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
E A++ + L+ ++ + N++ S A + + + + N+ F+
Sbjct: 281 IEQATAAIEGKNQAVLEGRRLVVNYMNKSQRSPA------GAEPVNEPSKTLFIGNLAFE 334
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
+++ +LF+ + VR+ +G RGF +F+ A + AL +YG
Sbjct: 335 MSDADLNKLFRDIRNVIDVRVAIDRR-TGQPRGFAHADFVDVESAIKGKDALL-GKEVYG 392
Query: 757 RRLVLEWA 764
R L ++++
Sbjct: 393 RTLRIDFS 400
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 37/195 (18%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPL-PLASV------RTTFLGMAYIGFKDEKNCNKAL-N 276
++I V NL + ++D++ F+ P+ SV R G Y+ F+ + A+
Sbjct: 231 NSIYVGNLLFDITQEDIQREFESFGPIKSVTIASDNRGLSKGFGYVEFESIEQATAAIEG 290
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE- 335
KN++ +G++L + + + S AE + E
Sbjct: 291 KNQAVLEGRRLVV----------------------------NYMNKSQRSPAGAEPVNEP 322
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +F+ NL++ +++ DL KLF + +V + ID+ T + +GFA F+ E A +
Sbjct: 323 SKTLFIGNLAFEMSDADLNKLFRDIRNVIDVRVAIDRRTGQPRGFAHADFVDVESAIKGK 382
Query: 396 QHLDGTVFLGRMLHL 410
L G GR L +
Sbjct: 383 DALLGKEVYGRTLRI 397
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A S I+V NL + +T++D+ + FE +GP+ V + D +KGF V F E AT
Sbjct: 228 APSNSIYVGNLLFDITQEDIQREFESFGPIKSVTIASDNR-GLSKGFGYVEFESIEQATA 286
Query: 394 AYQHLDGTVFLGRML 408
A + + V GR L
Sbjct: 287 AIEGKNQAVLEGRRL 301
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 96/188 (51%), Gaps = 9/188 (4%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
E T +++ L++N D ++ F+ CG + S V +D + S G+G+V+F
Sbjct: 193 EATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQK-----SRGFGYVEFADL 247
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL-VRNIPFQ 696
S +A++ S +D I + + + +EA + + N + ++ L + ++ F
Sbjct: 248 GSSAKAIE-KDGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFS 306
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
+ +V E F G+++ VRLP +G +GFG+V+F + ++A A+KA+ + G
Sbjct: 307 VTEDQVYEAFGQHGDVQSVRLPTDR-DTGAPKGFGYVQFSSVDDATAALKAM-NGAEIAG 364
Query: 757 RRLVLEWA 764
R + +++A
Sbjct: 365 RAIRVDFA 372
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+++ +LS++VTED + + F ++G + V LP D++T KGF V F + AT A + +
Sbjct: 298 LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDATAALKAM 357
Query: 399 DGTVFLGRMLHLIPGKPKENEG 420
+G GR + + PK++ G
Sbjct: 358 NGAEIAGRAIRVDFAPPKQDNG 379
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
+++ P TL+I +L+F+ TED + F + G + SV + +D +P G+G+VQ
Sbjct: 289 DKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAP-----KGFGYVQ 343
Query: 634 FYTRESLNQALKVLQNSSLDEHQIEL 659
F + + ALK + + + I +
Sbjct: 344 FSSVDDATAALKAMNGAEIAGRAIRV 369
>gi|134083605|emb|CAL00520.1| unnamed protein product [Aspergillus niger]
Length = 381
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 103/205 (50%), Gaps = 20/205 (9%)
Query: 563 PEVEENVEEDEEREPEPDT---TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
P+ E+ VE R EP T T++I N+ ++ T + +++ +K G + V +
Sbjct: 175 PDAEKQVEARRRRLQEPPTPKETVFIGNVFYDVTREDLKKAMEKYGVVEKVVLVLD---- 230
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN 679
+ +S GYG+VQF + ++ +A+ L + ++ ++ + N+ R+ N
Sbjct: 231 --NRGISKGYGYVQFDSIDAAQRAVDALNMRLFEGRRVTVQFAQNNV------YHRRQLN 282
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
+T + + N+PF+ ++ ELFK + +R+ +G RGF EF++ +
Sbjct: 283 APTRT---LYIGNLPFEMTDRDLNELFKDVQNVVDIRVAVDR-RTGQARGFAHAEFVSTS 338
Query: 740 EAKRAMKALCQSTHLYGRRLVLEWA 764
AK AM A+ ++ YGRRL L+++
Sbjct: 339 SAKAAM-AILENKLPYGRRLRLDYS 362
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 31/179 (17%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F+ N+ Y VT +DL K EKYG + +V+L +D +KG+ V F + A +A L
Sbjct: 198 VFIGNVFYDVTREDLKKAMEKYGVVEKVVLVLDNR-GISKGYGYVQFDSIDAAQRAVDAL 256
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ +F GR + + + + NV R+L+A R + + NLP+
Sbjct: 257 NMRLFEGRRVTV-----QFAQNNV-------YHRRQLNA--------PTRTLYIGNLPFE 296
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAF----NSLAYTK 507
DL LF+ ++ + V TG EF+ + AKAA N L Y +
Sbjct: 297 MTDRDLNELFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAMAILENKLPYGR 355
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 306 DNNNASMENIKAKHWKSQEDSVQFAEDI--------AESGRIFVRNLSYTVTEDDLTKLF 357
D +++ + + ++ + +VQFA++ A + +++ NL + +T+ DL +LF
Sbjct: 247 DAAQRAVDALNMRLFEGRRVTVQFAQNNVYHRRQLNAPTRTLYIGNLPFEMTDRDLNELF 306
Query: 358 EKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+ + ++ + +D+ T + +GFA F+ A A L+ + GR L L
Sbjct: 307 KDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAMAILENKLPYGRRLRL 359
>gi|330938161|ref|XP_003305701.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
gi|311317207|gb|EFQ86241.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
Length = 749
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 159/429 (37%), Gaps = 114/429 (26%)
Query: 213 PVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------FLGMAYIG 264
P S AP H + ++ V L V + L F + +AS+R LG AY+
Sbjct: 36 PTSAAPAHNQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVN 95
Query: 265 FKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
+ ++ KAL + N + KGK I +D + + +G
Sbjct: 96 YNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTG--------------------- 134
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
G +F++NL + + L F +G + + D E +KG+ V
Sbjct: 135 ------------QGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQD-ELGNSKGYGFV 181
Query: 384 TFLMPEHATQAYQHLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
+ E A A +H++G VF+G H IP K + ++ E K +
Sbjct: 182 HYETAEAANNAIKHVNGMLLNEKKVFVG---HHIPKKERMSK----------FEEMKANF 228
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFL 491
N I VKN+ D + LFE GD+ + G G V ++
Sbjct: 229 TN----------IYVKNIDLDVSDDDFRDLFEKHGDITSASIARDDQGKSRGF-GFVNYI 277
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
+ A AA ++L T F+ LY+ G+ ++K+E E E ++ +
Sbjct: 278 KHEAASAAVDALNDTDFRGQKLYV----------------GRAQKKHEREEELRKQYEAA 321
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
++ QGV LYIKNLN + ++ +R F G I S
Sbjct: 322 RLEKQSKYQGV-------------------NLYIKNLNDDVDDEKLRDMFTPFGTITSAK 362
Query: 612 VARKKDPKS 620
V R P +
Sbjct: 363 VMRDAMPAA 371
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 155/388 (39%), Gaps = 77/388 (19%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V L +VTE L +LF G +A + + D T ++ G+A V + E +A
Sbjct: 47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ L+ TV I GKP C I + D + + + +KNL
Sbjct: 107 EELNYTV--------IKGKP------------CRIMWSQRDP---ALRKTGQGNVFIKNL 143
Query: 456 PYRTLPTDLKALFEPFGDL--GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPL 513
+ L F FG++ +V G + F+ A+AA N++ +
Sbjct: 144 DHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVN------ 197
Query: 514 YLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDE 573
G+ K+ G K E + EE K N
Sbjct: 198 -------GMLLNEKKVFVGHHIPKKERMSKF--EEMKANF-------------------- 228
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
T +Y+KN++ + ++D R F+K G I S ++AR K S G+GFV
Sbjct: 229 -------TNIYVKNIDLDVSDDDFRDLFEKHGDITSASIARDDQGK------SRGFGFVN 275
Query: 634 FYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-KSSNVAKQT---GSKIL 689
+ E+ + A+ L ++ ++ + R+ + E E K+ +++ + KQ+ G +
Sbjct: 276 YIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLY 335
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRL 717
++N+ ++ ++F FG + ++
Sbjct: 336 IKNLNDDVDDEKLRDMFTPFGTITSAKV 363
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 28/201 (13%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ ++ F G I S VA+ + S GYGFV + T E+ N
Sbjct: 138 VFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNS------KGYGFVHYETAEAANN 191
Query: 643 ALKVLQNSSLDE------HQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
A+K + L+E H I K E K + I V+NI
Sbjct: 192 AIKHVNGMLLNEKKVFVGHHIPKKERMSKFEE------------MKANFTNIYVKNIDLD 239
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
+ +LF+ G++ + + G RGFGFV +I A A+ AL T G
Sbjct: 240 VSDDDFRDLFEKHGDITSASIARD--DQGKSRGFGFVNYIKHEAASAAVDAL-NDTDFRG 296
Query: 757 RRLVLEWAEEA-DNVEDIRKR 776
++L + A++ + E++RK+
Sbjct: 297 QKLYVGRAQKKHEREEELRKQ 317
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 14 HISLLDLDEVEFIYKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQA 73
++ +DLD ++ + + FE+ G +T + +GK R F F+ Y + + A A
Sbjct: 232 YVKNIDLD-------VSDDDFRDLFEKHGDITSASIARDDQGKSRGFGFVNYIKHEAASA 284
Query: 74 ALDYFNNTYVFSSRIKVEKC 93
A+D N+T ++ V +
Sbjct: 285 AVDALNDTDFRGQKLYVGRA 304
>gi|302673016|ref|XP_003026195.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
gi|300099876|gb|EFI91292.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
Length = 218
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 11/192 (5%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T++++ L F+ D +++ F K G I S V + + S G+G+V F T E
Sbjct: 3 TSVFVGGLPFDVDNDRLQQEFAKFGDIESAIVMMDRQTGN-----SRGFGYVHFATHEQA 57
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEA---TTVKRKSSNVAKQTGSKILVRNIPFQA 697
+A + + LD I + + A ++ R+ + + S + V N+ + A
Sbjct: 58 KKAKEEMDGYELDGRNIRTGTATKPQPKGAHDPSSRARQFGDKPSEPSSTLFVGNLSWSA 117
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ V LF +G +K VRLP + +G +GFG+VEF AK+A +AL L GR
Sbjct: 118 TEDAVWGLFNEYG-VKNVRLPTEFE-TGRPKGFGYVEFEDIEGAKKAYEALA-GAELDGR 174
Query: 758 RLVLEWAEEADN 769
+ L++++ D+
Sbjct: 175 NIRLDYSQPRDS 186
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 328 QFAEDIAE-SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
QF + +E S +FV NLS++ TED + LF +YG + V LP + ET + KGF V F
Sbjct: 96 QFGDKPSEPSSTLFVGNLSWSATEDAVWGLFNEYG-VKNVRLPTEFETGRPKGFGYVEFE 154
Query: 387 MPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
E A +AY+ L G GR + L +P+++
Sbjct: 155 DIEGAKKAYEALAGAELDGRNIRLDYSQPRDS 186
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV L + V D L + F K+G + I+ +D++T ++GF V F E A +A + +
Sbjct: 5 VFVGGLPFDVDNDRLQQEFAKFGDIESAIVMMDRQTGNSRGFGYVHFATHEQAKKAKEEM 64
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
DG GR + + +G D S R ++ E S + V NL +
Sbjct: 65 DGYELDGRNIRTGTATKPQPKGAHD------PSSRARQFGDKPSEPSS--TLFVGNLSWS 116
Query: 459 TLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAYTKFKEV 511
+ LF +G + V +P P G G VEF AK A+ +LA +
Sbjct: 117 ATEDAVWGLFNEYG-VKNVRLPTEFETGRPKGF-GYVEFEDIEGAKKAYEALAGAELDGR 174
Query: 512 PLYLEWA 518
+ L+++
Sbjct: 175 NIRLDYS 181
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 550 KENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIAS 609
+ TA + +G + + ++ EP +TL++ NL++++TED++ F + G + +
Sbjct: 75 RTGTATKPQPKGAHDPSSRARQFGDKPSEPSSTLFVGNLSWSATEDAVWGLFNEYG-VKN 133
Query: 610 VTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRS 662
V + + + P G+G+V+F E +A + L + LD I L S
Sbjct: 134 VRLPTEFETGRP-----KGFGYVEFEDIEGAKKAYEALAGAELDGRNIRLDYS 181
>gi|269859929|ref|XP_002649688.1| RNA-binding protein MRD1 [Enterocytozoon bieneusi H348]
gi|220066883|gb|EED44353.1| RNA-binding protein MRD1 [Enterocytozoon bieneusi H348]
Length = 421
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 668 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 727
S+ + ++ ++SN K+ ++N+PFQA + E++ LF FG + VR+PK +G
Sbjct: 326 SDHSNLQTQNSNKYPLLQKKLCIKNLPFQASKDELKLLFAGFGNIVDVRIPKNNMGRS-- 383
Query: 728 RGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEE 766
RGFGF+ F + ++ C + HLYGRRLVLE A++
Sbjct: 384 RGFGFITFEDPKTIDKIIEQ-CSNMHLYGRRLVLEKAQK 421
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 29 ITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRI 88
+ + +L+ FE+ G +TD+ + T +G FRR FIGY ++A A++Y NN+ + + +I
Sbjct: 13 VKECELREIFEKHGKITDLYMVTTPDGIFRRICFIGYASHEEAVQAINYRNNSMIHNHKI 72
Query: 89 KVEKCSNLGDTTKPKSWSKYAPDSSAY-------QKLHNI 121
K+E C ++ P+S+ D A+ Q L NI
Sbjct: 73 KIEMCEEKKLSSNPESYDTGNVDRKAFYSKGFWIQNLQNI 112
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 159/422 (37%), Gaps = 93/422 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ +I GKP V S+R V I +KNL
Sbjct: 73 N--------FDVIKGKP----------VRIMWSQRDPSLHKSGVGN-----IFIKNL--- 106
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYTKFKEV 511
D KAL++ F G +L G V F + A+ A +
Sbjct: 107 DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM-------- 158
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
G+ ++ G+ K + E E E G K+
Sbjct: 159 --------NGMLLNDRKVFVGRFKSRKEREAELGARAKE--------------------- 189
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
T +YIKN + ++ ++ F K GP SV V + K S G+GF
Sbjct: 190 --------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK------SKGFGF 235
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVAKQTGS 686
V F E +A+ + L+ QI + R+ + +E + T +KR K + + G
Sbjct: 236 VSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRITRYQGV 294
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+ V+N+ + + F FG + ++ M+ G +GFGFV F + EA +A+
Sbjct: 295 NLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 747 AL 748
+
Sbjct: 352 EM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLHKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
++LF FG V++ M SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KDLFGKFGPALSVKV---MTDESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 263
Query: 762 EWAEE 766
A++
Sbjct: 264 GRAQK 268
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 144/392 (36%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 10/193 (5%)
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
DE EP T+++ L+++ ++ ++ F+ G + S V +K G S GYG+
Sbjct: 155 DESEEP---ATIFVGRLSWSIDDEWLKTEFEPIGGVLSARVIYEK-----GTDRSRGYGY 206
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
V F + +A+K +Q +D I S S +K + + + +
Sbjct: 207 VDFKNKTFAEKAIKEMQGKEIDGRPINCDMSTSKPASNGGDRAKKFGDTPSEPSETLFLG 266
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
N+ F A + + E+F +GE+ VR+P + +GFG+V++ AK+A+ AL Q
Sbjct: 267 NLSFDADRDNIYEVFSKYGEIISVRIPTHPE-TEQPKGFGYVQYGDVESAKKALDAL-QG 324
Query: 752 THLYGRRLVLEWA 764
++ R + L+++
Sbjct: 325 EYINNRPVRLDFS 337
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 30/202 (14%)
Query: 218 PVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLP-LASVRTTF-------LGMAYIGFKDEK 269
P + TI V L + + LK F+P+ + S R + G Y+ FK++
Sbjct: 154 PDESEEPATIFVGRLSWSIDDEWLKTEFEPIGGVLSARVIYEKGTDRSRGYGYVDFKNKT 213
Query: 270 NCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQF 329
KA+ + +GK+++ + D S + AS +AK +F
Sbjct: 214 FAEKAIKE----MQGKEIDGRPINCDMST--------SKPASNGGDRAK---------KF 252
Query: 330 AEDIAE-SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP 388
+ +E S +F+ NLS+ D++ ++F KYG + V +P ET++ KGF V +
Sbjct: 253 GDTPSEPSETLFLGNLSFDADRDNIYEVFSKYGEIISVRIPTHPETEQPKGFGYVQYGDV 312
Query: 389 EHATQAYQHLDGTVFLGRMLHL 410
E A +A L G R + L
Sbjct: 313 ESAKKALDALQGEYINNRPVRL 334
>gi|340905324|gb|EGS17692.1| putative nucleolar protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 834
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 8/191 (4%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E+ ++FVR+L T T + LT+ F +Y P+ + +D +T +++GF V F P+ A +A
Sbjct: 44 ETRQLFVRSLPPTATSEKLTEFFSQYYPVKHATVVLDPKTKESRGFGFVAFTDPDDALEA 103
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDG--KVHCCISERKLDAFNQVVEARSKRIILV 452
+ L F GR L L P+ G V I E++ + ++ + ++I +
Sbjct: 104 KEKLQNFYFEGRHLKLDIAHPRHRNPEKSGVEAVTKAIEEKRKRELEKELKKQPPKLI-I 162
Query: 453 KNLPYRTLPTD-LKALFEPFGDLGRVLVP----PYGITGLVEFLQKNQAKAAFNSLAYTK 507
+NLP+ ++ L +FEP+G + +P G V ++ A+ A +++ T
Sbjct: 163 RNLPWSIKTSEQLAKIFEPYGKVKFSDLPNNNGKLAGFGFVTMRRRRNAQKAIDAVNGTV 222
Query: 508 FKEVPLYLEWA 518
+ ++WA
Sbjct: 223 IDGRTVVVDWA 233
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 22/195 (11%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++++L +T + + F + P+ TV DPK+ S G+GFV F + +
Sbjct: 48 LFVRSLPPTATSEKLTEFFSQYYPVKHATVVL--DPKTKE---SRGFGFVAFTDPDDALE 102
Query: 643 ALKVLQNSSLDEHQIELKRSN---RNLES---EATT------VKRKSSNVAKQTGSKILV 690
A + LQN + ++L ++ RN E EA T KR+ K+ K+++
Sbjct: 103 AKEKLQNFYFEGRHLKLDIAHPRHRNPEKSGVEAVTKAIEEKRKRELEKELKKQPPKLII 162
Query: 691 RNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
RN+P+ K SE + ++F+ +G++KF LP +G GFGFV + A++A+ A+
Sbjct: 163 RNLPWSIKTSEQLAKIFEPYGKVKFSDLPN---NNGKLAGFGFVTMRRRRNAQKAIDAV- 218
Query: 750 QSTHLYGRRLVLEWA 764
T + GR +V++WA
Sbjct: 219 NGTVIDGRTVVVDWA 233
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF 385
S IFVRNL YT T++ L F ++GP+ + IDK TDK G V F
Sbjct: 394 STTIFVRNLPYTTTDETLKAHFTRFGPVRYARVVIDKTTDKPAGTGFVCF 443
>gi|302655824|ref|XP_003019695.1| pre-mRNA splicing factor (Prp24), putative [Trichophyton verrucosum
HKI 0517]
gi|291183434|gb|EFE39050.1| pre-mRNA splicing factor (Prp24), putative [Trichophyton verrucosum
HKI 0517]
Length = 1402
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 28/169 (16%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG----- 630
EP DTT+++ N + E+ IR F G IA V +F S+ +
Sbjct: 978 EPVTDTTIFVTNFPPTADENYIRELFHSYGEIAEV------------RFPSLKFNTHRRF 1025
Query: 631 -FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
+VQF + S A ++ + D ++ +K S+ + +R++ + A + G +I
Sbjct: 1026 CYVQFTSSSSAYAATELDKKDLGDGLELVVKISDPS--------QRQARSGAYEEGREIY 1077
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
V NIP++ + ++ ELF A+G+++ VR+P K+ +G RGFGFV F TK
Sbjct: 1078 VCNIPYKTTEGDLVELFTAYGDVESVRIPTKV--NGETRGFGFVTFATK 1124
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 46/204 (22%)
Query: 544 EGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK 603
EGE E ++ +P VE + E ++ IKNL + + IR+ F+
Sbjct: 879 EGEPEVNGTVSKRAKGGAIPSVETRARDREH------ASVIIKNLPKDIPQVKIRQFFRD 932
Query: 604 CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN 663
CG + S+ + PG G ++F D H+ L
Sbjct: 933 CGKLNSLQML-------PGD---SGSALLEF------------------DTHEDALAAGT 964
Query: 664 RN---LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
+N LE TV+ T + I V N P A ++ + ELF ++GE+ VR P
Sbjct: 965 KNQKVLEGNQVTVE-------PVTDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPSL 1017
Query: 721 MVGSGLHRGFGFVEFITKNEAKRA 744
+ HR F +V+F + + A A
Sbjct: 1018 KFNT--HRRFCYVQFTSSSSAYAA 1039
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 335 ESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF 385
E GR I+V N+ Y TE DL +LF YG + V +P K +T+GF VTF
Sbjct: 1071 EEGREIYVCNIPYKTTEGDLVELFTAYGDVESVRIPT-KVNGETRGFGFVTF 1121
>gi|7673359|gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 479
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 20/174 (11%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+Y+KNL+ ++T+D +++ F + G I S V R D K S +GF+ F T E +
Sbjct: 41 VYVKNLSESTTDDGLKKVFGEFGNITSAVVMRDADGK------SKCFGFINFETAEDAAK 94
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT-----GSKILVRNIPFQA 697
A++ L D+ + + ++ + E E +K K AK+ G + V+N+
Sbjct: 95 AVESLNGKKFDDKEWYVGKAQKKSERE-QELKSKFEQTAKEAVDKYQGLNLYVKNLDDTI 153
Query: 698 KQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+++ELF FG + K +R P SG+ RG GFV F T EA RA+ +
Sbjct: 154 DDEKLKELFSEFGTITSCKVMRDP-----SGISRGSGFVAFSTSEEASRALSEM 202
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NLS + T+D L K+F ++G + ++ D + K+K F + F E A +A + L
Sbjct: 41 VYVKNLSESTTDDGLKKVFGEFGNITSAVVMRDAD-GKSKCFGFINFETAEDAAKAVESL 99
Query: 399 DGTVFLGRMLHLIPGKPK-ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
+G F + ++ + K E E + K E V+ + VKNL
Sbjct: 100 NGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKE--------AVDKYQGLNLYVKNLDD 151
Query: 458 RTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTKFKEVP 512
LK LF FG + +V+ P GI +G V F +A A + + P
Sbjct: 152 TIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMNGKMIVSKP 211
Query: 513 LYLEWA 518
LY+ A
Sbjct: 212 LYVALA 217
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 89/228 (39%), Gaps = 50/228 (21%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGITGLVEFLQKNQAKAAFNSLA 504
+ VKNL T LK +F FG++ +V G + F A A SL
Sbjct: 41 VYVKNLSESTTDDGLKKVFGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESLN 100
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEE--DNQQGV 562
KF + KE GK ++K+E E E + K E TA+E D QG+
Sbjct: 101 GKKFDD----------------KEWYVGKAQKKSEREQE--LKSKFEQTAKEAVDKYQGL 142
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPG 622
LY+KNL+ ++ ++ F + G I S V R DP
Sbjct: 143 -------------------NLYVKNLDDTIDDEKLKELFSEFGTITSCKVMR--DPSG-- 179
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
+S G GFV F T E ++AL + + + + + R E A
Sbjct: 180 --ISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQRKEERRA 225
>gi|322695076|gb|EFY86891.1| cutinase negative acting protein [Metarhizium acridum CQMa 102]
Length = 516
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 11/182 (6%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+TL+ NL++N ++++ FK + V +D S G+G+V F T E+
Sbjct: 267 STLFAGNLSWNIDDNTLSEAFKGFEGLVGARVVTDRD-----GGRSRGFGYVDFETAEAA 321
Query: 641 NQALKVLQNSSLDEHQIELKRSN-----RNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+A + +Q S LD + L +N N AT +K + + + N+PF
Sbjct: 322 TKAYEAMQGSELDSRPLNLDYANSRPADSNPRDRATDRAKKHGDSVSPESETLFIGNLPF 381
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
Q V + F E+ VRLP SG +GFG+V F + +AK + L +
Sbjct: 382 DTDQETVRQFFAEVAEVASVRLPTDP-DSGNLKGFGYVTFTSVEDAKNVFQQLNGAPLGN 440
Query: 756 GR 757
GR
Sbjct: 441 GR 442
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 12/171 (7%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F NLS+ + ++ L++ F+ + L + D++ +++GF V F E AT+AY+ +
Sbjct: 269 LFAGNLSWNIDDNTLSEAFKGFEGLVGARVVTDRDGGRSRGFGYVDFETAEAATKAYEAM 328
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
G+ R L+L + + N + +++ D+ + E + + NLP+
Sbjct: 329 QGSELDSRPLNLDYANSRPADSNPRDRA-TDRAKKHGDSVSPESE-----TLFIGNLPFD 382
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFNSL 503
T ++ F ++ V +P + G V F AK F L
Sbjct: 383 TDQETVRQFFAEVAEVASVRLPTDPDSGNLKGFGYVTFTSVEDAKNVFQQL 433
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +F+ NL + ++ + + F + +A V LP D ++ KGF VTF E A
Sbjct: 370 ESETLFIGNLPFDTDQETVRQFFAEVAEVASVRLPTDPDSGNLKGFGYVTFTSVEDAKNV 429
Query: 395 YQHLDG 400
+Q L+G
Sbjct: 430 FQQLNG 435
>gi|345569038|gb|EGX51907.1| hypothetical protein AOL_s00043g641 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++ L++N ED +RR F+ + + V + S G G+V F TR
Sbjct: 254 TLFVGQLSWNVDEDWLRREFEDVATVENARVVWDNQ-----RNRSKGIGYVDFATRADAE 308
Query: 642 QALKVLQNSSLDEHQIEL-----KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
+AL Q + +D I L +++N N + A RK + + V N+ F
Sbjct: 309 KALAEKQGAEIDGRPINLDFTTARQNNNNSQDRA----RKFGDSESPPSDTLFVGNLSFN 364
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
A + + GE+ VR+P +G +GF +V F T +EAK+A A+ + G
Sbjct: 365 ADEEALGAAMSEHGEVTSVRIPTDK-DTGNKKGFAYVTFSTIDEAKKAHAAM-NGQQVCG 422
Query: 757 RRLVLEWAEEADN 769
R + ++++ DN
Sbjct: 423 RSIRTDYSQPRDN 435
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 23/162 (14%)
Query: 259 GMAYIGFKDEKNCNKAL-NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G+ Y+ F + KAL K + G+ +N+ ++ A +NNN
Sbjct: 295 GIGYVDFATRADAEKALAEKQGAEIDGRPINL---------DFTTARQNNNN-------- 337
Query: 318 KHWKSQEDSVQFAE-DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
SQ+ + +F + + S +FV NLS+ E+ L ++G + V +P DK+T
Sbjct: 338 ----SQDRARKFGDSESPPSDTLFVGNLSFNADEEALGAAMSEHGEVTSVRIPTDKDTGN 393
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
KGFA VTF + A +A+ ++G GR + +P++N
Sbjct: 394 KKGFAYVTFSTIDEAKKAHAAMNGQQVCGRSIRTDYSQPRDN 435
>gi|411118097|ref|ZP_11390478.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711821|gb|EKQ69327.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 100
Score = 70.5 bits (171), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT DDLT+ F +YG + V LP D+ET + +GFA V +A + L
Sbjct: 3 IYVGNLSYNVTSDDLTQTFAEYGTVKRVQLPTDRETGRLRGFAFVEMETDAEEDKAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR L + +P+E G+ G
Sbjct: 63 DGAEWMGRDLKVNKARPREERGSSGG 88
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 145/392 (36%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
++LF FG V++ M SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KDLFGKFGPALSVKV---MTDESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 263
Query: 762 EWAEE 766
A++
Sbjct: 264 GRAQK 268
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|312068404|ref|XP_003137198.1| hypothetical protein LOAG_01611 [Loa loa]
gi|307767629|gb|EFO26863.1| hypothetical protein LOAG_01611, partial [Loa loa]
Length = 569
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 181/424 (42%), Gaps = 104/424 (24%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITG--LVEFLQKNQAKAAF 500
++V+NLP++T DL+A+F G +++P P G ++F ++ A A
Sbjct: 60 LIVRNLPFKTTQEDLEAVFASIGPFTEIVLPKCKDKRFPNSCAGFAFIQFRKRQDAVKAI 119
Query: 501 NSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAE--EDN 558
L ++ + ++WA + + E + +EK++N++ EE ++E + + E+
Sbjct: 120 EKLNTSEVLGRKIAIDWA---LSKDTYETAVHEEKQRNQKMKEEIKQEVESDNVSIIEER 176
Query: 559 QQGVPEVEENV--EEDE-----EREPEPDT--------------TLYIKNLNFNSTEDSI 597
++GV E++E V E DE E++PE T ++I+NL++++T+ ++
Sbjct: 177 ERGVSEIKEEVMSESDEDIQKVEKKPEKQTEREFKEDKAVLEGRVVFIRNLSYDTTDKAL 236
Query: 598 RRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNS---SLDE 654
R K G I+ + R + P G FV F T + + + L L + S+
Sbjct: 237 REALSKFGNISLAILCRYAGSEHP-----KGTAFVHFETPDGVEKCLTALDQAPGISIGG 291
Query: 655 HQI----ELKRS----------------NRNL-----------------ESEATTVKRKS 677
++ L RS RNL SE KR
Sbjct: 292 RRVFGHRALPRSEAAKIEKEKLSKKPKDKRNLFLLRAGFIRPGTTAAAGMSETDADKRAR 351
Query: 678 SNVAKQ----------TGSKILVRNIPFQAKQSEVEEL-FKAFG-------ELKFVRLPK 719
VA + + ++++V N+P + F A G E + R
Sbjct: 352 LAVAARQKLKNLHMFVSPTRLVVHNLPKSLTDKAFRSMCFIAAGNPDARITECRIWRDKN 411
Query: 720 KMVGSG--LHRGFGFVEFITKNEAKRAMKALCQSTHLYG--RRLVLEWAEEADNVEDIRK 775
K+ SG + RGFGFV F + +A AMK L + ++ +R ++E++ E N+ +R
Sbjct: 412 KLDTSGEAVSRGFGFVNFSSHQDALSAMKHLNNNPDIFTKEKRPIVEFSIE--NLVALRL 469
Query: 776 RTNR 779
R +R
Sbjct: 470 RESR 473
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 294 KDNSAKYSGAADDN-NNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDD 352
KD + GA+ N A+ E ++ + ++ DS +S R+ VRNL + T++D
Sbjct: 20 KDEKTEIPGASKSNMKKAAEERVREGNAFAKFDSQ------CKSWRLIVRNLPFKTTQED 73
Query: 353 LTKLFEKYGPLAEVILPIDKET---DKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLH 409
L +F GP E++LP K+ + GFA + F + A +A + L+ + LGR +
Sbjct: 74 LEAVFASIGPFTEIVLPKCKDKRFPNSCAGFAFIQFRKRQDAVKAIEKLNTSEVLGRKIA 133
Query: 410 L 410
+
Sbjct: 134 I 134
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPK---KMVGSGLHRGFGFVEFITKNEAKR 743
+++VRN+PF+ Q ++E +F + G + LPK K + GF F++F + +A +
Sbjct: 59 RLIVRNLPFKTTQEDLEAVFASIGPFTEIVLPKCKDKRFPNSCA-GFAFIQFRKRQDAVK 117
Query: 744 AMKALCQSTHLYGRRLVLEWAEEADNVE 771
A++ L ++ + GR++ ++WA D E
Sbjct: 118 AIEKL-NTSEVLGRKIAIDWALSKDTYE 144
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 59/238 (24%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPL-PLASVR----------TTFLGMAYIGFKDEKNCNKAL 275
++V+NLP ++DL+A F + P + + G A+I F+ ++ KA+
Sbjct: 60 LIVRNLPFKTTQEDLEAVFASIGPFTEIVLPKCKDKRFPNSCAGFAFIQFRKRQDAVKAI 119
Query: 276 NK-NKSFWKGKQLNI-YKYSKDNSAKYSGAADD-----------------NNNASM---- 312
K N S G+++ I + SKD Y A + ++N S+
Sbjct: 120 EKLNTSEVLGRKIAIDWALSKDT---YETAVHEEKQRNQKMKEEIKQEVESDNVSIIEER 176
Query: 313 ----ENIKAKHWKSQEDSVQ-------------FAED--IAESGRIFVRNLSYTVTEDDL 353
IK + ++ +Q F ED + E +F+RNLSY T+ L
Sbjct: 177 ERGVSEIKEEVMSESDEDIQKVEKKPEKQTEREFKEDKAVLEGRVVFIRNLSYDTTDKAL 236
Query: 354 TKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD---GTVFLGRML 408
+ K+G ++ IL ++ KG A V F P+ + LD G GR +
Sbjct: 237 REALSKFGNISLAILCRYAGSEHPKGTAFVHFETPDGVEKCLTALDQAPGISIGGRRV 294
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 160/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + DK T ++ G+A V + P + +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPRDSERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ + R K + S+GY +V +
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRR-----SLGYAYVNYQQPR 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DSERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 146/392 (37%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ ++ ++ +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNYQQPRDSERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN-------GSKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
++LF FG V++ M SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KDLFGKFGPALSVKV---MTDESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 263
Query: 762 EWAEE 766
A++
Sbjct: 264 GRAQK 268
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|194911931|ref|XP_001982402.1| GG12756 [Drosophila erecta]
gi|190648078|gb|EDV45371.1| GG12756 [Drosophila erecta]
Length = 466
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
E T L + L TED IR F G I SV + R K S GQ S+GYGFV +
Sbjct: 142 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDK---SQGQ--SLGYGFVNYVRP 196
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
+ QA+ VL L I++ + R SS+ K G+ + V +P
Sbjct: 197 QDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLYVSGLPKTM 242
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL +T
Sbjct: 243 TQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTT 297
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 25/136 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+TED++ LF G + V L DK ++ G+ V ++ P+ A QA L
Sbjct: 147 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQGQSLGYGFVNYVRPQDAEQAVNVL 206
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P +A + V LP
Sbjct: 207 NGLRLQNKTIKVSFARPSS-------------------------DAIKGANLYVSGLPKT 241
Query: 459 TLPTDLKALFEPFGDL 474
+L+A+F PFG +
Sbjct: 242 MTQQELEAIFAPFGAI 257
>gi|298492825|ref|YP_003723002.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234743|gb|ADI65879.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 101
Score = 70.5 bits (171), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VTEDDL + F +YG ++ V LP D+ET + +GFA V + T A + L
Sbjct: 3 IYVGNLSYQVTEDDLKQAFAEYGKVSRVQLPTDRETGRLRGFAFVEMETEDQETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG ++GR L + KP+E
Sbjct: 63 DGAEWMGRDLKVNKAKPRE 81
Score = 45.1 bits (105), Expect = 0.15, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTE-GKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y++T++ LK F E G V+ VQL E G+ R FAF+ EDQ AA++ +
Sbjct: 10 YQVTEDDLKQAFAEYGKVSRVQLPTDRETGRLRGFAFVEMETEDQETAAIEALDGAEWMG 69
Query: 86 SRIKVEKCSNLGDTTKPK 103
+KV K T P+
Sbjct: 70 RDLKVNKAKPREPRTSPR 87
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 159/422 (37%), Gaps = 93/422 (22%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ +I GKP V S+R V I +KNL
Sbjct: 73 N--------FDVIKGKP----------VRIMWSQRDPSLHKSGVGN-----IFIKNLDKS 109
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYTKFKEV 511
D KAL++ F G +L G V F + A+ A +
Sbjct: 110 I---DNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM-------- 158
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
G+ ++ G+ K + E E E G K+
Sbjct: 159 --------NGMLLNDRKVFVGRFKSRKEREAELGARAKE--------------------- 189
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
T +YIKN + ++ ++ F K GP SV V + K S G+GF
Sbjct: 190 --------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK------SKGFGF 235
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVAKQTGS 686
V F E +A+ + L+ QI + R+ + +E + T +KR K + + G
Sbjct: 236 VSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRITRYQGV 294
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+ V+N+ + + F FG + ++ M+ G +GFGFV F + EA +A+
Sbjct: 295 NLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 747 AL 748
+
Sbjct: 352 EM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLHKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
++LF FG V++ SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KDLFGKFGPALSVKVMTD--ESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYVG 264
Query: 763 WAEE 766
A++
Sbjct: 265 RAQK 268
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 144/392 (36%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 145/392 (36%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
++LF FG V++ M SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KDLFGKFGPALSVKV---MTDESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 263
Query: 762 EWAEE 766
A++
Sbjct: 264 GRAQK 268
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|195347400|ref|XP_002040241.1| GM19036 [Drosophila sechellia]
gi|195564435|ref|XP_002105824.1| GD16475 [Drosophila simulans]
gi|194121669|gb|EDW43712.1| GM19036 [Drosophila sechellia]
gi|194203185|gb|EDX16761.1| GD16475 [Drosophila simulans]
Length = 466
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
E T L + L TED IR F G I SV + R K S GQ S+GYGFV +
Sbjct: 142 ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDK---SQGQ--SLGYGFVNYVRP 196
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
+ QA+ VL L I++ + R SS+ K G+ + V +P
Sbjct: 197 QDAEQAVNVLNGLRLQNKTIKV------------SFARPSSDAIK--GANLYVSGLPKTM 242
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
Q E+E +F FG + R+ + +G GF+ F + EA RA+ AL +T
Sbjct: 243 TQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTT 297
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 25/136 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+TED++ LF G + V L DK ++ G+ V ++ P+ A QA L
Sbjct: 147 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQGQSLGYGFVNYVRPQDAEQAVNVL 206
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P +A + V LP
Sbjct: 207 NGLRLQNKTIKVSFARPSS-------------------------DAIKGANLYVSGLPKT 241
Query: 459 TLPTDLKALFEPFGDL 474
+L+A+F PFG +
Sbjct: 242 MTQQELEAIFAPFGAI 257
>gi|1438951|gb|AAB04133.1| cutinase negative acting protein [Nectria haematococca mpVI]
Length = 507
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 13/191 (6%)
Query: 564 EVEENVEEDEEREPEPD--TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
+ E++++ DE ++ + D TTL+ +L++N +D++ FK+ + V +K
Sbjct: 232 KAEDDIDSDEAKKTKTDAPTTLFAGSLSWNIDDDALYEAFKEFNGLVGARVVTEK----- 286
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN-----RNLESEATTVKRK 676
G S G+G+V F E +A + +Q LD + L +N N A ++
Sbjct: 287 GTGRSRGFGYVDFNDPEGCTKAYEAMQGFELDGRALNLDYANARPADANPAGRAADRAKR 346
Query: 677 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
+ + V N+P Q V E F E+ VRLP SG +GFG+V F
Sbjct: 347 HGDTLSPESDTLFVGNLPIDVDQDAVREFFGEVAEVASVRLPTDP-DSGNLKGFGYVSFN 405
Query: 737 TKNEAKRAMKA 747
+ +AK + A
Sbjct: 406 SVEDAKAVIDA 416
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F +LS+ + +D L + F+++ L + +K T +++GF V F PE T+AY+ +
Sbjct: 253 LFAGSLSWNIDDDALYEAFKEFNGLVGARVVTEKGTGRSRGFGYVDFNDPEGCTKAYEAM 312
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
G GR L+L + + N G+ ++R D + + + V NLP
Sbjct: 313 QGFELDGRALNLDYANARPADANPAGRA-ADRAKRHGDTLSPESD-----TLFVGNLP-- 364
Query: 459 TLPTDLKALFEPFGDLGRV 477
+ D A+ E FG++ V
Sbjct: 365 -IDVDQDAVREFFGEVAEV 382
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSF-WKGKQLNI-YKYSKDNSAKYSGAADDNNNASMENIK 316
G Y+ F D + C KA + F G+ LN+ Y ++ A +G A D
Sbjct: 293 GFGYVDFNDPEGCTKAYEAMQGFELDGRALNLDYANARPADANPAGRAAD---------- 342
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
K D++ ES +FV NL V +D + + F + +A V LP D ++
Sbjct: 343 --RAKRHGDTLS-----PESDTLFVGNLPIDVDQDAVREFFGEVAEVASVRLPTDPDSGN 395
Query: 377 TKGFALVTFLMPEHATQAYQHLDGT-VFLGRMLHLI 411
KGF V+F E A +G + GRM +
Sbjct: 396 LKGFGYVSFNSVEDAKAVIDAKNGAPIGNGRMSRSV 431
>gi|325182450|emb|CCA16902.1| polyadenylatebinding protein putative [Albugo laibachii Nc14]
Length = 675
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 169/456 (37%), Gaps = 107/456 (23%)
Query: 204 TAPSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT------ 256
T+P++ PV Q ++ V ++ V + L F + P+AS+R
Sbjct: 55 TSPTNSPTAASVSGPVQPFQTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTR 114
Query: 257 -FLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMEN 314
LG AY+ F + + +AL+ N + KG I +D S + SG
Sbjct: 115 RSLGYAYVNFHNLVDAERALDTMNFTCIKGVPCRIMWSQRDPSLRKSGV----------- 163
Query: 315 IKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET 374
G IFV+NL ++ L F +G + + D T
Sbjct: 164 ----------------------GNIFVKNLDPSIDNKALYDTFSLFGNILSCKVANDP-T 200
Query: 375 DKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERK 434
++KG+ V + E AT+A ++G + G + + + ++ +++ +C
Sbjct: 201 GQSKGYGYVHYETAEAATEAINKINGMLIAGTEVFVGHFQKRQERPDIEDWTNC------ 254
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV--PPYGIT----GLV 488
VKNLP + DL+ FEPFG + +V P T G V
Sbjct: 255 ----------------YVKNLPTQWTDADLRREFEPFGQVNSAVVMKDPNSATNRGFGFV 298
Query: 489 EFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEE 548
+ + A AA L+ FK GV E GK +++ E E E ++
Sbjct: 299 NYEDADGAHAAVEGLSGKTFK-----------GVNGVDLELYVGKAQKRTERERELRQKF 347
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
+ + QGV LY+KNL+ ++ +R F G I
Sbjct: 348 DQLKLERINKYQGV-------------------NLYVKNLDDLLQDEELREAFTNYGTIT 388
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
S V R S G S G+GFV F T E A+
Sbjct: 389 SARVMR----DSTGN--SRGFGFVCFSTPEEAATAV 418
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 20/189 (10%)
Query: 573 EEREPEPD----TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
++R+ PD T Y+KNL T+ +RR F+ G + S V KDP S + G
Sbjct: 240 QKRQERPDIEDWTNCYVKNLPTQWTDADLRREFEPFGQVNSAVVM--KDPNSA---TNRG 294
Query: 629 YGFVQFYTRESLNQALKVLQNSS---LDEHQIEL------KRSNRNLESEATTVKRKSSN 679
+GFV + + + A++ L + ++ +EL KR+ R E + K
Sbjct: 295 FGFVNYEDADGAHAAVEGLSGKTFKGVNGVDLELYVGKAQKRTERERELRQKFDQLKLER 354
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
+ K G + V+N+ + E+ E F +G + R+ + G+ RGFGFV F T
Sbjct: 355 INKYQGVNLYVKNLDDLLQDEELREAFTNYGTITSARVMRDSTGN--SRGFGFVCFSTPE 412
Query: 740 EAKRAMKAL 748
EA A+ +
Sbjct: 413 EAATAVAEM 421
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 81/205 (39%), Gaps = 20/205 (9%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
+P +LY+ +++ + TE + F GP+AS+ V R + S+GY +V F+
Sbjct: 71 QPFQTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRR-----SLGYAYVNFH 125
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+AL + + + + S R+ ++ K I V+N+
Sbjct: 126 NLVDAERALDTMNFTCIKGVPCRIMWSQRD------------PSLRKSGVGNIFVKNLDP 173
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
+ + F FG + ++ G +G+G+V + T A A+ + +
Sbjct: 174 SIDNKALYDTFSLFGNILSCKVANDPTGQ--SKGYGYVHYETAEAATEAINKI-NGMLIA 230
Query: 756 GRRLVLEWAEEADNVEDIRKRTNRY 780
G + + ++ DI TN Y
Sbjct: 231 GTEVFVGHFQKRQERPDIEDWTNCY 255
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+++KNL+ + ++ F G I S VA DP GQ S GYG+V + T E+ +
Sbjct: 166 IFVKNLDPSIDNKALYDTFSLFGNILSCKVA--NDPT--GQ--SKGYGYVHYETAEAATE 219
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A+ + + ++ + + +++ ++ T V+N+P Q +++
Sbjct: 220 AINKINGMLIAGTEVFVGHFQK---------RQERPDIEDWT--NCYVKNLPTQWTDADL 268
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
F+ FG++ + K S +RGFGFV + + A A++ L T
Sbjct: 269 RREFEPFGQVNSAVVMKD-PNSATNRGFGFVNYEDADGAHAAVEGLSGKT 317
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NL + +++L + F YG + + D T ++GF V F PE A A +
Sbjct: 363 LYVKNLDDLLQDEELREAFTNYGTITSARVMRD-STGNSRGFGFVCFSTPEEAATAVAEM 421
Query: 399 DGTVFLGRMLHLIPGKPKE 417
+G + G+ +++ + KE
Sbjct: 422 NGKLITGKPVYVAFAQRKE 440
>gi|194018610|ref|NP_001123392.1| RNA binding motif protein 28 [Xenopus (Silurana) tropicalis]
gi|189442619|gb|AAI67360.1| rbm28 protein [Xenopus (Silurana) tropicalis]
Length = 828
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 26/201 (12%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL+++ L +++ + + + F + GP+ V R+K G G+G+V F E
Sbjct: 5 TLFVRGLPESASNERLEQIFSESGPVRQSFVVREK-----GTEKCRGFGYVTFSMMEDAQ 59
Query: 642 QALKVLQNSSLDEHQIEL--------------KRSNRNLESEATTVKRKSSNVAKQTGSK 687
+A+K ++ + ++++ + SN N A VK+ Q ++
Sbjct: 60 RAMKEIKEYEGRKIEVQVAKKKQVEKNKKAKCEESNEN----AKEVKKPKDARGAQKKAR 115
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
+++RN+ FQ + +++E F FG + + +PKK G RGF FV+F EA +A+K
Sbjct: 116 LIIRNLSFQCSEEDLKEHFSNFGYVLEINIPKK--SDGKMRGFAFVQFKNMLEASKALKG 173
Query: 748 LCQSTHLYGRRLVLEWAEEAD 768
+ + GR + ++WA D
Sbjct: 174 TNMKS-IKGRTVAVDWAVAKD 193
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR L + + + L ++F + GP+ + + +K T+K +GF VTF M E A +A + +
Sbjct: 6 LFVRGLPESASNERLEQIFSESGPVRQSFVVREKGTEKCRGFGYVTFSMMEDAQRAMKEI 65
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARS---KRIILVKNL 455
+ GR + + K K+ E N K C S + +AR K ++++NL
Sbjct: 66 --KEYEGRKIEVQVAKKKQVEKNKKAK--CEESNENAKEVKKPKDARGAQKKARLIIRNL 121
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYG---ITG--LVEFLQKNQAKAAFNSLAYTKFKE 510
++ DLK F FG + + +P + G V+F +A A K
Sbjct: 122 SFQCSEEDLKEHFSNFGYVLEINIPKKSDGKMRGFAFVQFKNMLEASKALKGTNMKSIKG 181
Query: 511 VPLYLEWA 518
+ ++WA
Sbjct: 182 RTVAVDWA 189
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----------GMAYIGFKDEKNCNKAL 275
T+ V+ LP + L+ F VR +F+ G Y+ F ++ +A+
Sbjct: 5 TLFVRGLPESASNERLEQIFSES--GPVRQSFVVREKGTEKCRGFGYVTFSMMEDAQRAM 62
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
+ K + +G+++ + K K A + +N EN AK K +D A +
Sbjct: 63 KEIKEY-EGRKIEVQVAKKKQVEKNKKAKCEESN---EN--AKEVKKPKD----ARGAQK 112
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
R+ +RNLS+ +E+DL + F +G + E+ +P K K +GFA V F A++A
Sbjct: 113 KARLIIRNLSFQCSEEDLKEHFSNFGYVLEINIP-KKSDGKMRGFAFVQFKNMLEASKAL 171
Query: 396 QHLDGTVFLGRMLHL 410
+ + GR + +
Sbjct: 172 KGTNMKSIKGRTVAV 186
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 564 EVEENVEE----DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPK 619
E EN +E + R + L I+NL+F +E+ ++ HF G + + + +K D K
Sbjct: 93 ESNENAKEVKKPKDARGAQKKARLIIRNLSFQCSEEDLKEHFSNFGYVLEINIPKKSDGK 152
Query: 620 SPGQFLSMGYGFVQFYTRESLNQALK 645
G+ FVQF ++ALK
Sbjct: 153 ------MRGFAFVQFKNMLEASKALK 172
>gi|365758602|gb|EHN00436.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 455
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 102/248 (41%), Gaps = 81/248 (32%)
Query: 563 PEVEENVE--------EDEEREPEP---------------DTTLYIKNLNFNSTEDSIRR 599
P E+NV ED++ E +P D LY+ NL+ TED +++
Sbjct: 34 PSAEQNVSGEVNSTQVEDDQGESDPSVVPANAITGGRETSDRVLYVGNLDKAITEDILKQ 93
Query: 600 HFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
+F+ GPIA++ + K+ K ++ Y FV+++ N AL+ L
Sbjct: 94 YFQVGGPIANIKIMIDKNNK------NVNYAFVEYHQSHDANIALQTLN----------- 136
Query: 660 KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAF-GELK----- 713
KQ + I+ N FQ++QS ++ F F G+L
Sbjct: 137 ---------------------GKQIENNIVKINWAFQSQQSSSDDTFNLFVGDLNVNVDD 175
Query: 714 ------FVRLPKKMVG-------SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
F P + G +G RG+GFV F ++++A+ AM + Q L GR L
Sbjct: 176 ETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTM-QGQDLNGRPLR 234
Query: 761 LEWAEEAD 768
+ WA + D
Sbjct: 235 INWAAKRD 242
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NL +TED L + F+ GP+A + + IDK +K +A V + A A Q L
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTL 135
Query: 399 DG 400
+G
Sbjct: 136 NG 137
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T LY+KN+N +T++ + F K GPI S ++ + D K G+GFV + E
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK------LKGFGFVNYEKHEDA 272
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQ 696
+A++ L +S L+ ++ + R+ + E K+ + +AK G + V+N+
Sbjct: 273 VKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDS 332
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
++EE F +G + ++ + +G +GFGFV F T EA +A+ Q + G
Sbjct: 333 VDDEKLEEEFAPYGTITSAKVMR--TENGKSKGFGFVCFSTPEEATKAITEKNQQI-VAG 389
Query: 757 RRLVLEWAEEAD 768
+ L + A+ D
Sbjct: 390 KPLYVAIAQRKD 401
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 158/434 (36%), Gaps = 108/434 (24%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRT-------TFLGMAYIGFKDEKNCNKALNK 277
++ V +L V + L F P+ ++S+R T LG AY+ F D + KA+ +
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N + KG+ I +D S + G S
Sbjct: 99 LNYTPIKGRLCRIMWSQRDPSLRKKG---------------------------------S 125
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G IF++NL + L F +G + + D E K+KGF V F A +A
Sbjct: 126 GNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAID 184
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-ILVKNL 455
L+G + G+ +++ P H ER +Q+ E ++ + VKN+
Sbjct: 185 ALNGMLLNGQEIYVAP--------------HLSRKERD----SQLEETKAHYTNLYVKNI 226
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYTKFKE 510
T + LF FG + + G V + + A A +L ++
Sbjct: 227 NSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNG 286
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
LY+ G+ ++KNE ++ + + QGV
Sbjct: 287 EKLYV----------------GRAQKKNERMHVLKKQYEAYRLEKMAKYQGV-------- 322
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
L++KNL+ + ++ + F G I S V R ++ K S G+G
Sbjct: 323 -----------NLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGK------SKGFG 365
Query: 631 FVQFYTRESLNQAL 644
FV F T E +A+
Sbjct: 366 FVCFSTPEEATKAI 379
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L + +E + F G ++S+ V R K+ S+GY +V F E+
Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT-----SLGYAYVNFNDHEAG 92
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A++ L + + + S R+ ++++K S I ++N+
Sbjct: 93 RKAIEQLNYTPIKGRLCRIMWSQRD-----PSLRKKGS-------GNIFIKNLHPDIDNK 140
Query: 701 EVEELFKAFGELKFVRLPKKMVG--SGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F FG++ L K+ +G +GFGFV F + AK A+ AL
Sbjct: 141 ALYDTFSVFGDI----LSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV+NL +V ++ L + F YG + + + E K+KGF V F PE AT+A
Sbjct: 324 LFVKNLDDSVDDEKLEEEFAPYGTITSAKV-MRTENGKSKGFGFVCFSTPEEATKAITEK 382
Query: 399 DGTVFLGRMLHL 410
+ + G+ L++
Sbjct: 383 NQQIVAGKPLYV 394
>gi|160333518|ref|NP_001103836.1| poly A binding protein, cytoplasmic 5 [Rattus norvegicus]
gi|149055477|gb|EDM07061.1| rCG38154 [Rattus norvegicus]
Length = 382
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 157/414 (37%), Gaps = 80/414 (19%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
V +L VTED L K F GPL + D T G+ V F P A A ++
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 401 TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTL 460
+ G+ L+ +P ++ RK N I +KNL
Sbjct: 82 DLINGKPFRLMWSQPDDHL-------------RKSGVGN----------IFIKNLDKSID 118
Query: 461 PTDLKALFEPFGDL--GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
L LF FG++ +V+ G K A F+SLA W
Sbjct: 119 NRALFYLFSAFGNILSCKVVCDDNG--------SKGYAYVHFDSLAAAN------RAIWH 164
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
GV ++ G+ K PE E E R+
Sbjct: 165 MNGVRLNNRQVYVGRFK--------------------------FPE--ERAAEVRTRDRA 196
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +++KN + ++ +++ F + GP SV V R KS G+GFV++ T E
Sbjct: 197 TFTNVFVKNFGDDIDDEKLKKLFSEYGPTESVKVIRDATGKSK------GFGFVRYETHE 250
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIP 694
+ +A+ L S+D + + R+ + +E A +R K + + G I ++N+
Sbjct: 251 AAQKAVLELHGKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKDKTRPPGVPIYIKNLD 310
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+++E F FG + K M+ G +GFG V F + EA +A+ +
Sbjct: 311 ETINDEKLKEEFSLFGS---ISRAKVMMEVGQGKGFGVVCFSSFEEASKAVNEM 361
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 16/229 (6%)
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
NT D G P + D+ ++IKNL+ + ++ F G I S
Sbjct: 77 NTMNFDLINGKPFRLMWSQPDDHLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCK 136
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
V + S GY +V F + + N+A+ + L+ Q+ + R + E A
Sbjct: 137 VVCDDNG-------SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF-KFPEERAA 188
Query: 672 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
V+ + + T + + V+N ++++LF +G + V++ + G +GFG
Sbjct: 189 EVRTRD----RATFTNVFVKNFGDDIDDEKLKKLFSEYGPTESVKVIRDATGK--SKGFG 242
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVEDIRKRTNR 779
FV + T A++A+ L + G+ L + A+ + + + ++R+R R
Sbjct: 243 FVRYETHEAAQKAVLEL-HGKSIDGKVLCVGRAQKKIERLAELRRRFER 290
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 45/192 (23%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D A +FV+N + ++ L KLF +YGP E + I T K+KGF V + E A
Sbjct: 194 DRATFTNVFVKNFGDDIDDEKLKKLFSEYGP-TESVKVIRDATGKSKGFGFVRYETHEAA 252
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCC-ISERKLDAFNQVVEARSKRI- 449
+A L G ++DGKV C +++K++ + + R +R+
Sbjct: 253 QKAVLELHGK-------------------SIDGKVLCVGRAQKKIERLAE-LRRRFERLK 292
Query: 450 -----------ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKA 498
I +KNL LK F FG + R V ++ Q K
Sbjct: 293 LKDKTRPPGVPIYIKNLDETINDEKLKEEFSLFGSISRAKV----------MMEVGQGK- 341
Query: 499 AFNSLAYTKFKE 510
F + ++ F+E
Sbjct: 342 GFGVVCFSSFEE 353
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+++NL T+ ++ L + F +G ++ + + E + KGF +V F E A++A +
Sbjct: 304 IYIKNLDETINDEKLKEEFSLFGSISRAKVMM--EVGQGKGFGVVCFSSFEEASKAVNEM 361
Query: 399 DGTVFLGRMLHLIPGKPK 416
+G V + LH+ G+ +
Sbjct: 362 NGRVVGSKTLHVTLGQAR 379
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 70/175 (40%), Gaps = 26/175 (14%)
Query: 585 IKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ +L+ + TED + + F+ GP+ + R +SP +GYG+V F AL
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSP-----LGYGYVNFRFPADAEWAL 76
Query: 645 KVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ ++ L S + ++ K I ++N+ +
Sbjct: 77 NTMNFDLINGKPFRLMWS------------QPDDHLRKSGVGNIFIKNLDKSIDNRALFY 124
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
LF AFG + ++ GS +G+ +V F + A RA+ H+ G RL
Sbjct: 125 LFSAFGNILSCKVVCDDNGS---KGYAYVHFDSLAAANRAI------WHMNGVRL 170
>gi|411119813|ref|ZP_11392189.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410709969|gb|EKQ67480.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 90
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLS+ E+D+ ++F +YG ++ V LP D+ET + +GFA V A L
Sbjct: 3 IYVGNLSFQAEEEDIREVFSEYGKVSRVSLPTDRETGRKRGFAFVDMESDAEEDAAIAEL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG +LGR L + KP+E+ GN
Sbjct: 63 DGAEWLGRELKVNKAKPRESGGN 85
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ FQA++ ++ E+F +G++ V LP +G RGF FV+ + E A+
Sbjct: 3 IYVGNLSFQAEEEDIREVFSEYGKVSRVSLPTDRE-TGRKRGFAFVDMESDAEEDAAIAE 61
Query: 748 LCQSTHLYGRRL 759
L + L GR L
Sbjct: 62 LDGAEWL-GREL 72
>gi|195434178|ref|XP_002065080.1| GK14865 [Drosophila willistoni]
gi|194161165|gb|EDW76066.1| GK14865 [Drosophila willistoni]
Length = 725
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 116 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 170
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 171 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 216
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFITKNEAKRAMKALCQS 751
QS++E LF +G++ R+ + GL +G GF+ F + EA RA+K L +
Sbjct: 217 NMTQSDLESLFSPYGKIITSRILCDNITDEHAPGLSKGVGFIRFDQRFEADRAIKELNGT 276
Query: 752 T 752
T
Sbjct: 277 T 277
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IA SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 367 IASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 426
Query: 392 TQAYQHLDGTVFLGRMLH 409
A Q L+G R+L
Sbjct: 427 VLAIQSLNGYTLGNRVLQ 444
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 123 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 182
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 183 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 217
Query: 459 TLPTDLKALFEPFGDL--GRVLV 479
+DL++LF P+G + R+L
Sbjct: 218 MTQSDLESLFSPYGKIITSRILC 240
>gi|197097448|ref|NP_001126434.1| polyadenylate-binding protein 5 [Pongo abelii]
gi|55731438|emb|CAH92432.1| hypothetical protein [Pongo abelii]
Length = 382
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 157/414 (37%), Gaps = 80/414 (19%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
V +L VTED L K F GPL + D T G+ V F P A A ++
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 401 TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTL 460
+ G+ L+ +P + RK N I +KNL
Sbjct: 82 DLINGKPFRLMWSQPDDRL-------------RKSGVGN----------IFIKNLDKSID 118
Query: 461 PTDLKALFEPFGDL--GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
L LF FGD+ +V+ G K A F+SLA W
Sbjct: 119 NRALFYLFSAFGDILSCKVVCDDNG--------SKGYAYVHFDSLAAAN------RAIWH 164
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
GV ++ G+ K PE E E R+
Sbjct: 165 MNGVRLNNRQVYVGRFK--------------------------FPE--ERAAEVRTRDRA 196
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +++KN+ + ++ ++ F + GP SV V R KS G+GFV++ T E
Sbjct: 197 TFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSK------GFGFVRYETHE 250
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT----GSKILVRNIP 694
+ +A+ L S+D + + R+ + +E A +R K+ G I ++N+
Sbjct: 251 AAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLD 310
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+++E F +FG + ++ M+ G +GFG V F + EA +A+ +
Sbjct: 311 ETINDEKLKEEFSSFGSISRAKV---MMEVGQGKGFGVVCFSSFEEATKAVDEM 361
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 26/175 (14%)
Query: 585 IKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ +L+ + TED + + F+ GP+ + R +SP +GYG+V F AL
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSP-----LGYGYVNFRFPADAEWAL 76
Query: 645 KVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ ++ L + S+ RKS I ++N+ +
Sbjct: 77 NTMNFDLINGKPFRL------MWSQPDDRLRKSGV------GNIFIKNLDKSIDNRALFY 124
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
LF AFG++ ++ GS +G+ +V F + A RA+ H+ G RL
Sbjct: 125 LFSAFGDILSCKVVCDDNGS---KGYAYVHFDSLAAANRAI------WHMNGVRL 170
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
I+++NL T+ ++ L + F +G + A+V++ E + KGF +V F E AT+A
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMM----EVGQGKGFGVVCFSSFEEATKAVD 359
Query: 397 HLDGTVFLGRMLHLIPGKPK 416
++G + + LH+ G+ +
Sbjct: 360 EMNGRIVGSKPLHVTLGQAR 379
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D A +FV+N+ + ++ L +LF +YGP E + I + K+KGF V + E A
Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGP-TESVKVIRDASGKSKGFGFVRYETHEAA 252
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A L G G++L++
Sbjct: 253 QKAVLDLHGKSIDGKVLYV 271
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSQKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 146/392 (37%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L +LF K+GP V + D E+ K+
Sbjct: 172 RFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSQKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
+ELF FG V++ M SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KELFGKFGPALSVKV---MTDESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 263
Query: 762 EWAEE 766
A++
Sbjct: 264 GRAQK 268
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
E+ P L++ NL++N E ++ F+ G ++ V + ++D S G+G+V
Sbjct: 277 EDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERD-----TGRSRGFGYV 331
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIEL---------KRSNRNLESEATTVKRKSSNVAKQ 683
++ +A + + + +D I L K + A R + A
Sbjct: 332 EYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQASP 391
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ V N+PF A + V ELF G + +RLP SG +GFG+V++ + +EA+
Sbjct: 392 ESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTD-PDSGRPKGFGYVQYSSVDEARA 450
Query: 744 AMKALCQSTHLYGRRLVLEWA 764
A L Q L GR + L+++
Sbjct: 451 AFNEL-QGADLLGRPVRLDFS 470
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +FV NL + ED + +LF + G + + LP D ++ + KGF V + + A A
Sbjct: 392 ESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAA 451
Query: 395 YQHLDGTVFLGRMLHLIPGKPKEN 418
+ L G LGR + L P+ N
Sbjct: 452 FNELQGADLLGRPVRLDFSTPRAN 475
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 667 ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 726
E+ AT K K+ + A + + V N+ + ++ ++ F++FGEL VR+ + +G
Sbjct: 266 ETSATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTER-DTGR 324
Query: 727 HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
RGFG+VE+ +A +A +A + + GR + L++A
Sbjct: 325 SRGFGYVEYTNAVDAAKAFEA-KKGAEIDGRVINLDYA 361
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
E+ P L++ NL++N E ++ F+ G ++ V + ++D S G+G+V
Sbjct: 279 EDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERD-----TGRSRGFGYV 333
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIEL---------KRSNRNLESEATTVKRKSSNVAKQ 683
++ +A + + + +D I L K + A R + A
Sbjct: 334 EYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQASP 393
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ V N+PF A + V ELF G + +RLP SG +GFG+V++ + +EA+
Sbjct: 394 ESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTD-PDSGRPKGFGYVQYSSVDEARA 452
Query: 744 AMKALCQSTHLYGRRLVLEWA 764
A L Q L GR + L+++
Sbjct: 453 AFNEL-QGADLLGRPVRLDFS 472
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +FV NL + ED + +LF + G + + LP D ++ + KGF V + + A A
Sbjct: 394 ESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAA 453
Query: 395 YQHLDGTVFLGRMLHLIPGKPKEN 418
+ L G LGR + L P+ N
Sbjct: 454 FNELQGADLLGRPVRLDFSTPRAN 477
>gi|401838326|gb|EJT42016.1| PUB1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 459
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 102/248 (41%), Gaps = 81/248 (32%)
Query: 563 PEVEENVE--------EDEEREPEP---------------DTTLYIKNLNFNSTEDSIRR 599
P E+NV ED++ E +P D LY+ NL+ TED +++
Sbjct: 34 PSAEQNVSGEVNSTQVEDDQGESDPSVVPANAITGGRETSDRVLYVGNLDKAITEDILKQ 93
Query: 600 HFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIEL 659
+F+ GPIA++ + K+ K ++ Y FV+++ N AL+ L
Sbjct: 94 YFQVGGPIANIKIMIDKNNK------NVNYAFVEYHQSHDANIALQTLN----------- 136
Query: 660 KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAF-GELK----- 713
KQ + I+ N FQ++QS ++ F F G+L
Sbjct: 137 ---------------------GKQIENNIVKINWAFQSQQSSSDDTFNLFVGDLNVNVDD 175
Query: 714 ------FVRLPKKMVG-------SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
F P + G +G RG+GFV F ++++A+ AM + Q L GR L
Sbjct: 176 ETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTM-QGQDLNGRPLR 234
Query: 761 LEWAEEAD 768
+ WA + D
Sbjct: 235 INWAAKRD 242
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NL +TED L + F+ GP+A + + IDK +K +A V + A A Q L
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTL 135
Query: 399 DG 400
+G
Sbjct: 136 NG 137
>gi|172035929|ref|YP_001802430.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354556024|ref|ZP_08975322.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171697383|gb|ACB50364.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353552023|gb|EHC21421.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 98
Score = 70.5 bits (171), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL Y VT +DLT++F +YG + V LP D+ET + +GF V + T A + L
Sbjct: 3 IYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRPRGFGFVEMESDDQETAAIETL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEG 420
DG ++GR + + KP+EN G
Sbjct: 63 DGADWMGRQMRVNKAKPRENSG 84
>gi|425448844|ref|ZP_18828688.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
gi|389767705|emb|CCI06977.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
Length = 97
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IFV NLSY +++DDL ++F++YG + V +P+DKET + +GFA V T A + L
Sbjct: 3 IFVGNLSYDISQDDLVEVFKEYGNVQRVHIPVDKETGRKRGFAFVEMENKAQETTAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR + + + +E +G
Sbjct: 63 DGAEWMGRSIKVNEARDREERAPFNG 88
>gi|440492802|gb|ELQ75340.1| RNA-binding protein (RRM superfamily) [Trachipleistophora hominis]
Length = 413
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+K++++N+PFQA + E++ + +LK +RLPKK G+H+G+ FV + +AK
Sbjct: 335 NKLIIKNVPFQANKEEIKRILTTQVKLKDIRLPKK--RDGMHKGYCFVTLNSPEDAKIVY 392
Query: 746 KALCQSTHLYGRRLVLEWAEE 766
+ +THLYGRRLV+E A+E
Sbjct: 393 QYFGNNTHLYGRRLVIEPAQE 413
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 141/340 (41%), Gaps = 67/340 (19%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKDEKNCNKAL-N 276
+VVKNLP + + D+KA F+ ++ FL G+ +IG+ E+ +A+
Sbjct: 3 LVVKNLPPKITENDIKAIFR--EYGTLTDVFLLRRNASLNKGVCFIGYSKEEYAKEAIKQ 60
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA-- 334
++ S+ + +++ I + +D+ K ME K + E+ ED++
Sbjct: 61 RHGSYIENRKI-IVEMVRDDKLK---------RLKMELKKIGSGSNPEE-----EDVSVE 105
Query: 335 -ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
+S +++ L V+++D+ F + + + +D++T G A+VT E A +
Sbjct: 106 VKSKSLYLTKLPVIVSKEDIVNYFSDCN-IKNIEMVLDEKTGNFYGHAIVTMDDIESAKR 164
Query: 394 AYQHLDGTVFLGRMLHLI----PGKPKENEG----NVDGKVHCCISERKL---DAFNQVV 442
A + D V LGR + + P KE N + V SE K+ + +
Sbjct: 165 AIRQKD--VLLGRRIQISFYNEPPSKKEYYSKLFFNFESVVESICSEEKITKKELLDLKD 222
Query: 443 EARSKRIILVK----------------NLPYRTLPTDLKALFEPFGDL-------GRVLV 479
E RI L++ NL T + K L +L V V
Sbjct: 223 ENLGTRISLIETHLVEQTRRFLENNNINLDNLTGKVNKKVLIVRNSNLLSLNFRNCNVKV 282
Query: 480 PPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAP 519
P L+EF + AK ++ L Y + K+ +Y+++ P
Sbjct: 283 APSKCLALLEFRSEEDAKKVYDELQYKRVKDKAIYVDFLP 322
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 28 KITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSR 87
KIT+ +KA F E GT+TDV L + FIGY +E+ A+ A+ + +Y+ + +
Sbjct: 11 KITENDIKAIFREYGTLTDVFLLRRNASLNKGVCFIGYSKEEYAKEAIKQRHGSYIENRK 70
Query: 88 IKVE 91
I VE
Sbjct: 71 IIVE 74
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 159/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 145/392 (36%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L V + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
++LF FG V++ M SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KDLFGKFGPALSVKV---MTDESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 263
Query: 762 EWAEE 766
A++
Sbjct: 264 GRAQK 268
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|75908205|ref|YP_322501.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75701930|gb|ABA21606.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 109
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I++ NLSY VTE+DL F +YG ++ V LP D+ET + +GFA V T A + L
Sbjct: 3 IYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG ++GR L + KP+E
Sbjct: 63 DGAEWMGRDLKVNKAKPRE 81
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTE-GKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y++T+E LK F E G V+ VQL E G+ R FAF+ E Q AA++ +
Sbjct: 10 YQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEALDGAEWMG 69
Query: 86 SRIKVEKCSNLGDTTKP 102
+KV K + + P
Sbjct: 70 RDLKVNKAKPREERSSP 86
>gi|425434339|ref|ZP_18814808.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|425450077|ref|ZP_18829909.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440751641|ref|ZP_20930844.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389676192|emb|CCH94745.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|389769258|emb|CCI05857.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440176134|gb|ELP55407.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL + V +DD+ ++F++YG + V LP+D+ET K +GFA V PE T+A L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR L + + +E + + G
Sbjct: 63 DGAQWMGRELKVNQAREREPKSSFGG 88
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+PF+ Q +V E+FK +G++K V LP +G RGF FVE T E +A+ A
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRE-TGKKRGFAFVEMETPEEETKAIAA 61
Query: 748 LCQSTHLYGRRLVLEWAEE 766
L GR L + A E
Sbjct: 62 L-DGAQWMGRELKVNQARE 79
>gi|302496478|ref|XP_003010240.1| pre-mRNA splicing factor (Prp24), putative [Arthroderma benhamiae CBS
112371]
gi|291173782|gb|EFE29600.1| pre-mRNA splicing factor (Prp24), putative [Arthroderma benhamiae CBS
112371]
Length = 1598
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 28/169 (16%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG----- 630
EP DTT+++ N + E+ IR F G IA V +F S+ +
Sbjct: 1174 EPVTDTTIFVTNFPPTADENYIRELFHSYGEIAEV------------RFPSLKFNTHRRF 1221
Query: 631 -FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
+VQF + S A ++ + D ++ +K S+ + +R++ + A + G +I
Sbjct: 1222 CYVQFTSSSSAYAATELDKKDLGDGLELVVKISDPS--------QRQARSGAYEEGREIY 1273
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
V NIP++ + ++ ELF A+G+++ VR+P K+ +G RGFGFV F TK
Sbjct: 1274 VCNIPYKTTEGDLVELFTAYGDVESVRIPTKV--NGETRGFGFVTFATK 1320
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 46/204 (22%)
Query: 544 EGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKK 603
EGE E ++ +P VE + E ++ IKNL + + IR+ F+
Sbjct: 1075 EGEPEVNGTVSKRAKGGAIPSVETRARDREH------ASVIIKNLPKDIPQVKIRQFFRD 1128
Query: 604 CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN 663
CG + S+ + PG G ++F D H+ L
Sbjct: 1129 CGKLNSLQML-------PGD---SGSALLEF------------------DTHEDALAAGT 1160
Query: 664 RN---LESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK 720
+N LE TV+ T + I V N P A ++ + ELF ++GE+ VR P
Sbjct: 1161 KNQKVLEGNQVTVE-------PVTDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPSL 1213
Query: 721 MVGSGLHRGFGFVEFITKNEAKRA 744
+ HR F +V+F + + A A
Sbjct: 1214 KFNT--HRRFCYVQFTSSSSAYAA 1235
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 335 ESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF 385
E GR I+V N+ Y TE DL +LF YG + V +P K +T+GF VTF
Sbjct: 1267 EEGREIYVCNIPYKTTEGDLVELFTAYGDVESVRIPT-KVNGETRGFGFVTF 1317
>gi|389632413|ref|XP_003713859.1| nucleolar protein 4 [Magnaporthe oryzae 70-15]
gi|351646192|gb|EHA54052.1| nucleolar protein 4 [Magnaporthe oryzae 70-15]
Length = 722
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 142/361 (39%), Gaps = 67/361 (18%)
Query: 348 VTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRM 407
T + LT+LF ++ P+ + +D++T +G+ VTF E A QA + LD + GR
Sbjct: 20 ATSETLTELFSQHFPVKHATVVLDQKTKTPRGYGFVTFTDAEDALQAKEKLDNHLIEGRR 79
Query: 408 LHLIPGKPKENEGNVDG-KVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTD-LK 465
L L +P+ G V ++ K + E R ++++NLP+ D L
Sbjct: 80 LRLEIAEPRHRAATKAGVAVDTPLAAEKRKREEEEAEGRKPPKLIIRNLPWSIKTKDQLS 139
Query: 466 ALFEPFGDLGRVLVP----PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPE- 520
ALF+ +G + VP G V K A+ A L + + ++WA +
Sbjct: 140 ALFQSYGKVRFSDVPNSKGKLSGFGFVTLRGKKNAEKAIEGLNGKEVDGRTIAVDWAVDK 199
Query: 521 ----------------------GVFAEAKEK---SKGKEKEKNEEEGEEGEEEKKENTAE 555
V AEAK K + K K K ++ +E E+ K +
Sbjct: 200 ATWEKQQQNEDDSDTPKKTKMKKVDAEAKSKADQASTKTKPKGNDDFDEDEDLKNFFANQ 259
Query: 556 EDNQQGVPEVEE-------------------------NVEEDEEREPEPDT-----TLYI 585
DN + E +E NV +DEE + P T TL+I
Sbjct: 260 GDNLEDEDESDEDDDEDKKSEDADEEDEDEDEEEGGANVNDDEETKKTPQTTDNSNTLFI 319
Query: 586 KNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALK 645
+NL F +T++ ++ HF G + V + S G GFV F+ E L+
Sbjct: 320 RNLPFTTTDEQLKEHFTHFGAVRYARVVMDHATQK-----SAGKGFVCFFNAEDAESCLR 374
Query: 646 V 646
Sbjct: 375 A 375
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 40/195 (20%)
Query: 592 STEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
+T +++ F + P+ TV + K+P GYGFV F E QA
Sbjct: 20 ATSETLTELFSQHFPVKHATVVLDQKTKTP-----RGYGFVTFTDAEDALQA-----KEK 69
Query: 652 LDEHQIELKRSNRNLESEATTVKRKSSNVA---------------------KQTGSKILV 690
LD H IE R L E + +++ A + K+++
Sbjct: 70 LDNHLIE----GRRLRLEIAEPRHRAATKAGVAVDTPLAAEKRKREEEEAEGRKPPKLII 125
Query: 691 RNIPFQAK-QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
RN+P+ K + ++ LF+++G+++F +P G GFGFV K A++A++ L
Sbjct: 126 RNLPWSIKTKDQLSALFQSYGKVRFSDVPN---SKGKLSGFGFVTLRGKKNAEKAIEGL- 181
Query: 750 QSTHLYGRRLVLEWA 764
+ GR + ++WA
Sbjct: 182 NGKEVDGRTIAVDWA 196
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 26/211 (12%)
Query: 572 DEEREP-----------EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
+EE EP L++ NL++N E+ +R F++ G ++ + ++
Sbjct: 218 EEEAEPVAKKAKVDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRE--- 274
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNV 680
S G+G+V+F E +A +++ LD ++ L +N A +R + N
Sbjct: 275 --SGRSRGFGYVEFVNVEDAVKAHGAKKDAELDGRKMNLDYANARANGNANPRER-ADNR 331
Query: 681 AKQTGSK-------ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
AK G + + + NI F A ++ V+ELF +G ++ +RLP SG +GFG+V
Sbjct: 332 AKSFGDQTSPESDTLFIGNISFSADENMVQELFSKYGTIQGIRLPTDP-DSGRPKGFGYV 390
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+F + +EA+ A++A L GR + L+++
Sbjct: 391 QFSSVDEARAALEA-EHGADLGGRSIRLDFS 420
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +F+ N+S++ E+ + +LF KYG + + LP D ++ + KGF V F + A A
Sbjct: 342 ESDTLFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAA 401
Query: 395 YQHLDGTVFLGRMLHLIPGKPKE 417
+ G GR + L PK+
Sbjct: 402 LEAEHGADLGGRSIRLDFSTPKQ 424
>gi|195384832|ref|XP_002051116.1| GJ13991 [Drosophila virilis]
gi|194147573|gb|EDW63271.1| GJ13991 [Drosophila virilis]
Length = 725
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 97 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 151
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 152 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 197
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFITKNEAKRAMKALCQS 751
QS++E LF +G++ R+ + +GL +G GF+ F + EA RA+K L +
Sbjct: 198 NMTQSDLESLFSPYGKIITSRILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT 257
Query: 752 T 752
T
Sbjct: 258 T 258
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
I SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 348 ITSSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 407
Query: 392 TQAYQHLDGTVFLGRMLH 409
A Q L+G R+L
Sbjct: 408 VLAIQSLNGYTLGNRVLQ 425
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 104 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 163
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 164 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 198
Query: 459 TLPTDLKALFEPFGDL--GRVLV 479
+DL++LF P+G + R+L
Sbjct: 199 MTQSDLESLFSPYGKIITSRILC 221
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 259 GMAYIGFKDEKNCNKALN-KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G Y+ F+ + KA N KN +F +G+++ + D +AK S AD NA
Sbjct: 330 GFGYVDFETPEAAEKAYNDKNGAFLQGREMRL-----DFAAKPS--ADSTPNARAAERAR 382
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
KH D + ES +FV NLS++ E+ ++ F K + + +P D+E+ +
Sbjct: 383 KHG----DVIS-----PESDTLFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRP 433
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
KGFA VTF + A A++ L+G+ GR + L KP++
Sbjct: 434 KGFAYVTFSSVDDAKAAFEALNGSDLDGRPVRLDFAKPRD 473
>gi|6102944|emb|CAB59276.1| hypothetical protein [Homo sapiens]
Length = 367
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 157/413 (38%), Gaps = 80/413 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTED L K F GPL + D T G+ V F P A A +
Sbjct: 5 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 64
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ + G+ L+ +P + RK N I +KNL
Sbjct: 65 NFDLINGKPFRLMWSQPDDRL-------------RKSGVGN----------IFIKNLDKS 101
Query: 459 TLPTDLKALFEPFGDL--GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLE 516
L LF FG++ +V+ G K A F+SLA
Sbjct: 102 IDNRALFYLFSAFGNILSCKVVCDDNG--------SKGYAYVHFDSLAAAN------RAI 147
Query: 517 WAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEERE 576
W GV ++ G+ K PE E E R+
Sbjct: 148 WHMNGVRLNNRQVYVGRFK--------------------------FPE--ERAAEVRTRD 179
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
T +++KN+ + ++ ++ F + GP SV V R KS G+GFV++ T
Sbjct: 180 RATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSK------GFGFVRYET 233
Query: 637 RESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT----GSKILVRN 692
E+ +A+ L S+D + + R+ + +E A +R K+ G I ++N
Sbjct: 234 HEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKN 293
Query: 693 IPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ +++E F +FG + K M+ G +GFG V F + EA +A+
Sbjct: 294 LDETINDEKLKEEFSSFGS---ISRAKVMMEVGQGKGFGVVCFSSFEEATKAV 343
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 14/197 (7%)
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
NT D G P + D+ ++IKNL+ + ++ F G I S
Sbjct: 62 NTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCK 121
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
V + S GY +V F + + N+A+ + L+ Q+ + R + E A
Sbjct: 122 VVCDDNG-------SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF-KFPEERAA 173
Query: 672 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
V+ + + T + + V+NI +++ELF +G + V++ + SG +GFG
Sbjct: 174 EVRTRD----RATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD--ASGKSKGFG 227
Query: 732 FVEFITKNEAKRAMKAL 748
FV + T A++A+ L
Sbjct: 228 FVRYETHEAAQKAVLDL 244
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 26/179 (14%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
LY+ +L+ + TED + + F+ GP+ + R +SP +GYG+V F
Sbjct: 3 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSP-----LGYGYVNFRFPADA 57
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
AL + ++ L + S+ RKS I ++N+
Sbjct: 58 EWALNTMNFDLINGKPFRL------MWSQPDDRLRKSGV------GNIFIKNLDKSIDNR 105
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
+ LF AFG + ++ GS +G+ +V F + A RA+ H+ G RL
Sbjct: 106 ALFYLFSAFGNILSCKVVCDDNGS---KGYAYVHFDSLAAANRAI------WHMNGVRL 155
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
I+++NL T+ ++ L + F +G + A+V++ E + KGF +V F E AT+A
Sbjct: 289 IYIKNLDETINDEKLKEEFSSFGSISRAKVMM----EVGQGKGFGVVCFSSFEEATKAVD 344
Query: 397 HLDGTVFLGRMLHLIPGKPK 416
++G + + LH+ G+ +
Sbjct: 345 EMNGRIVGSKPLHVTLGQAR 364
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D A +FV+N+ + ++ L +LF +YGP E + I + K+KGF V + E A
Sbjct: 179 DRATFTNVFVKNIGDDIDDEKLKELFCEYGP-TESVKVIRDASGKSKGFGFVRYETHEAA 237
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A L G G++L++
Sbjct: 238 QKAVLDLHGKSIDGKVLYV 256
>gi|357447143|ref|XP_003593847.1| Multiple RNA-binding domain-containing protein [Medicago
truncatula]
gi|355482895|gb|AES64098.1| Multiple RNA-binding domain-containing protein [Medicago
truncatula]
Length = 559
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 48/233 (20%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
++ ES R+FVRNL YT TE++L + F ++G +++V L +DKET ++KG A + F +P+ A
Sbjct: 268 EVPESCRLFVRNLPYTTTEEELEEYFSQFGSVSQVHLVVDKETKRSKGIAYIHFSVPDFA 327
Query: 392 TQAYQHLD-----------------------GTVFLGRMLHLIPGKPKENEGNVDGKVHC 428
+ +++ G L + P EN G
Sbjct: 328 ARVRNNVENCFQGTKTLKQRREEERKVAEASGDTRAWNSLFMRPDTIVENVARKYGVSKS 387
Query: 429 CISERKLDAFNQVVEARSKRII-----LVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYG 483
+ +R+ D + ++I L +NLPY +L + FG L ++++
Sbjct: 388 DLLDREADDLAVRIALGETQVISETKTLRRNLPYGATENELAKILGKFGSLDKIILASTK 447
Query: 484 ITGL--------------------VEFLQKNQAKAAFNSLAYTKFKEVPLYLE 516
L V FL+ +AKA F LAY ++K+ P +E
Sbjct: 448 TLALVFFLSPSFHDMSMYFLYFGEVVFLEPTEAKADFTGLAYKRYKDAPNCME 500
>gi|432097499|gb|ELK27684.1| Polyadenylate-binding protein 4-like protein [Myotis davidii]
Length = 370
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 157/423 (37%), Gaps = 101/423 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE+ L F G + + + D T + G+A V FL A +A +
Sbjct: 12 LYVGDLPPDVTENMLFLKFSTVGTVLSIRICRDLVTRCSLGYAYVNFLHVADAQRALDTM 71
Query: 399 DGTVFLGRMLHLIPGKP-----KENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + L+ + K GNV +K
Sbjct: 72 NFDVIQGQSIRLMWSQRDAYLRKSGIGNV----------------------------FIK 103
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D K L+E F G++L G V F + A A +
Sbjct: 104 NLDK---SIDNKTLYEHFSVFGKILSSKVMCDDQGSRGYGFVHFQNQAAADRAIEEMNGV 160
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
K+ L++ G K + + E E +N A E
Sbjct: 161 LLKDFRLFV----------------GPFKNRRDREAE------LQNKASEF--------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN ++ ++ F G I SV V KS G
Sbjct: 190 --------------TNIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSSGKSKG---- 231
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVK----RKSSNVAK 682
+GFV F T E+ +A+ ++ + Q+ + R+ + E +A + RK +
Sbjct: 232 --FGFVSFDTHEAAKRAVDIVNGREIFGQQVFVGRAQKKAERQAELKQLFEQRKQERSWR 289
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
G+KI V+N+ + ++ + F +FG + +R+ K M G RGFG + F + EA
Sbjct: 290 VRGTKIYVKNLDETIDEEKLRKAFSSFGSI--IRV-KVMQEEGRSRGFGLICFSSPEEAA 346
Query: 743 RAM 745
RAM
Sbjct: 347 RAM 349
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ HF G I S V S GYGFV F + + ++
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSVFGKILSSKVMCDDQG-------SRGYGFVHFQNQAAADR 152
Query: 643 ALKVLQNSSLDEHQIELK--RSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
A++ + L + ++ + ++ R+ E+E ++ K+S + I ++N +
Sbjct: 153 AIEEMNGVLLKDFRLFVGPFKNRRDREAE---LQNKASEF-----TNIYIKNFGDEMDDE 204
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
+++E F +G++ V++ SG +GFGFV F T AKRA+ + ++G+++
Sbjct: 205 KLKEFFSHYGKIVSVKVMTD--SSGKSKGFGFVSFDTHEAAKRAVD-IVNGREIFGQQVF 261
Query: 761 LEWAEE 766
+ A++
Sbjct: 262 VGRAQK 267
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
+I+V+NL T+ E+ L K F +G + V + +E +++GF L+ F PE A +A
Sbjct: 294 KIYVKNLDETIDEEKLRKAFSSFGSIIRV--KVMQEEGRSRGFGLICFSSPEEAARAMAE 351
Query: 398 LDGTVF 403
++G +
Sbjct: 352 MNGRLL 357
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 20/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L + TE+ + F G + S+ + R + S+GY +V F
Sbjct: 10 ASLYVGDLPPDVTENMLFLKFSTVGTVLSIRICRDLVTRC-----SLGYAYVNFLHVADA 64
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL + + I L S R+ + + K + ++N+
Sbjct: 65 QRALDTMNFDVIQGQSIRLMWSQRD------------AYLRKSGIGNVFIKNLDKSIDNK 112
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ E F FG+ + K M RG+GFV F + A RA++ +
Sbjct: 113 TLYEHFSVFGK---ILSSKVMCDDQGSRGYGFVHFQNQAAADRAIEEM 157
>gi|198473023|ref|XP_002133161.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
gi|198139264|gb|EDY70563.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 114 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 168
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 169 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 214
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFITKNEAKRAMKALCQS 751
QS++E LF +G++ R+ + GL +G GF+ F + EA RA+K L +
Sbjct: 215 NMTQSDLESLFSPYGKIITSRILCDNITDEHAPGLSKGVGFIRFDQRFEADRAIKELNGT 274
Query: 752 T 752
T
Sbjct: 275 T 275
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 333 IAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
IA SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT E A
Sbjct: 365 IASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 424
Query: 392 TQAYQHLDGTVFLGRMLH 409
A Q L+G R+L
Sbjct: 425 VLAIQSLNGYTLGNRVLQ 442
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 121 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 180
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 181 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 215
Query: 459 TLPTDLKALFEPFGDL--GRVLV 479
+DL++LF P+G + R+L
Sbjct: 216 MTQSDLESLFSPYGKIITSRILC 238
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
E+ P L++ NL++N E ++ F+ G ++ V + ++D S G+G+V
Sbjct: 287 EDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERD-----TGRSRGFGYV 341
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIEL---------KRSNRNLESEATTVKRKSSNVAKQ 683
++ +A + + + +D I L K + A R + A
Sbjct: 342 EYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQASP 401
Query: 684 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 743
+ V N+PF A + V ELF G + +RLP SG +GFG+V++ + +EA+
Sbjct: 402 ESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTD-PDSGRPKGFGYVQYSSVDEARA 460
Query: 744 AMKALCQSTHLYGRRLVLEWA 764
A L Q L GR + L+++
Sbjct: 461 AFNEL-QGADLLGRPVRLDFS 480
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +FV NL + ED + +LF + G + + LP D ++ + KGF V + + A A
Sbjct: 402 ESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAA 461
Query: 395 YQHLDGTVFLGRMLHLIPGKPKEN 418
+ L G LGR + L P+ N
Sbjct: 462 FNELQGADLLGRPVRLDFSTPRAN 485
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 667 ESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 726
E+ AT K K+ + A + + V N+ + ++ ++ F++FGEL VR+ + +G
Sbjct: 276 ETSATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTER-DTGR 334
Query: 727 HRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
RGFG+VE+ +A +A +A + + GR + L++A
Sbjct: 335 SRGFGYVEYTNAVDAAKAFEA-KKGAEIDGRVINLDYA 371
>gi|340518594|gb|EGR48835.1| predicted protein [Trichoderma reesei QM6a]
Length = 748
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 113/233 (48%), Gaps = 20/233 (8%)
Query: 537 KNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDS 596
+N+ + + E T D G+ + + ++ R ++++++L ++T +S
Sbjct: 5 QNDRKRRRQDSESSAATKSHDPDGGISRTPKKAKVEDRR------SVFVRSLPPSATNES 58
Query: 597 IRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQ 656
+ F + P+ TV + K S G+GFV F + A + L D +
Sbjct: 59 LADFFSQYFPVKHATVVVDQKTKE-----SRGFGFVSFADADDAKAAKEALDKKEWDGRR 113
Query: 657 IELKRS---NRNLESEATTVKRKSSNVAKQTG-SKILVRNIPFQAKQSE-VEELFKAFGE 711
I ++ + +RN + ++ +K A Q +K+++RN+P+ K E + +LF +FG+
Sbjct: 114 IRIEVAEPRHRNPDPDSDAAAKKPGKPAYQPPPTKLIIRNLPWSIKTPEQLSKLFISFGK 173
Query: 712 LKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+KF LP+ G +GFGFV + A++A++A+ + GR L ++WA
Sbjct: 174 VKFADLPQ---NKGKLKGFGFVTLRGRPNAEKALEAINGKV-VDGRTLAVDWA 222
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + L F +Y P+ + +D++T +++GF V+F + A A + L
Sbjct: 45 VFVRSLPPSATNESLADFFSQYFPVKHATVVVDQKTKESRGFGFVSFADADDAKAAKEAL 104
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
D + GR + + +P+ N D + A+ ++++NLP+
Sbjct: 105 DKKEWDGRRIRIEVAEPRHR--NPDPDSDAAAKKPGKPAYQPPPTK-----LIIRNLPWS 157
Query: 459 T-LPTDLKALFEPFGDL 474
P L LF FG +
Sbjct: 158 IKTPEQLSKLFISFGKV 174
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
S +FVRNL +T T++ L F +G + + IDK T+K G V F+
Sbjct: 336 SSTVFVRNLPFTTTDEQLQSFFGHFGKVRYARVVIDKATEKPAGTGFVCFV 386
>gi|126660168|ref|ZP_01731286.1| RNA binding protein [Cyanothece sp. CCY0110]
gi|126618533|gb|EAZ89284.1| RNA binding protein [Cyanothece sp. CCY0110]
Length = 98
Score = 70.1 bits (170), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL Y VT +DLT++F +YG + V LP D+ET + +GF V + T A + L
Sbjct: 3 IYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRPRGFGFVEMESDDEETAAIETL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEG 420
DG ++GR + + KP+EN G
Sbjct: 63 DGADWMGRQMRVNKAKPRENSG 84
>gi|301125993|ref|XP_002909814.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
gi|262103703|gb|EEY61755.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
Length = 587
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 189/505 (37%), Gaps = 121/505 (23%)
Query: 249 PLASVRTT-------FLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKY 300
P+AS+R LG AY+ F + + +AL+ N + KG I +D S +
Sbjct: 16 PVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRK 75
Query: 301 SGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
SG G IFV+NL ++ L F +
Sbjct: 76 SGV---------------------------------GNIFVKNLDTSIDNKALYDTFSLF 102
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
G + + I+ T +KG+ V + E AT+A ++G + G + + + +++
Sbjct: 103 GNILSCKVAIEHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRP 162
Query: 421 NVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV- 479
+ D +C VKN+P + DL FEPFG + +V
Sbjct: 163 DADDWTNC----------------------YVKNIPTQWTDADLLKEFEPFGKVLSAVVM 200
Query: 480 -----PPYGIT-GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGK 533
P + G V + + + A A ++L + A EG+ E K
Sbjct: 201 KDNANPDHNRGFGFVNYEESDAAHKAVDALNGKSYP--------AGEGLDTEMYVGKAQK 252
Query: 534 EKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNST 593
E+ E + E+ K E + QGV LY+KNL+ +
Sbjct: 253 RSERERELRNKFEQLKMERI---NKYQGV-------------------NLYVKNLDDQLS 290
Query: 594 EDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLD 653
+D +R F +CG I S V R DP S G+GFV F T E N+A+ + +
Sbjct: 291 DDELREAFAECGTITSSRVMR--DPNG----NSRGFGFVCFSTPEEANKAVAEMNGKLIS 344
Query: 654 EHQIELKRSNRNLESEATTVKRKS--SNVAKQTGSKILVRNIPF-QAKQSEVEELFKA-F 709
+ + + R V+R + A+Q ++ R +P Q +F
Sbjct: 345 GKPVYVALAQRK------EVRRAQLEAQHAQQRAGMVVGRGMPMGQPPMYGAAPMFYGQP 398
Query: 710 GEL-----KFVRLPKKMVGSGLHRG 729
G+L + P++M+ G+ RG
Sbjct: 399 GQLPPQARQGFMYPQQMMPRGVQRG 423
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 573 EEREPEPD----TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
++R+ PD T Y+KN+ T+ + + F+ G + S V KD +P + G
Sbjct: 156 QKRQDRPDADDWTNCYVKNIPTQWTDADLLKEFEPFGKVLSAVVM--KDNANPDH--NRG 211
Query: 629 YGFVQFYTRESLNQALKVLQNSS------LDEHQI---ELKRSNRNLESEATTVKRKSSN 679
+GFV + ++ ++A+ L S LD KRS R E + K
Sbjct: 212 FGFVNYEESDAAHKAVDALNGKSYPAGEGLDTEMYVGKAQKRSERERELRNKFEQLKMER 271
Query: 680 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 739
+ K G + V+N+ Q E+ E F G + R+ + G+ RGFGFV F T
Sbjct: 272 INKYQGVNLYVKNLDDQLSDDELREAFAECGTITSSRVMRDPNGN--SRGFGFVCFSTPE 329
Query: 740 EAKRAMKAL 748
EA +A+ +
Sbjct: 330 EANKAVAEM 338
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 26/211 (12%)
Query: 572 DEEREP-----------EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
+EE EP L++ NL++N E+ +R F++ G ++ + ++
Sbjct: 218 EEEAEPVAKKAKVDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRE--- 274
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNV 680
S G+G+V+F E +A +++ LD ++ L +N A +R + N
Sbjct: 275 --SGRSRGFGYVEFVNVEDAVKAHGAKKDAELDGRKMNLDYANARANGNANPRER-ADNR 331
Query: 681 AKQTGSK-------ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
AK G + + + NI F A ++ V+ELF +G ++ +RLP SG +GFG+V
Sbjct: 332 AKSFGDQTSPESDTLFIGNISFSADENMVQELFSKYGTIQGIRLPTDP-DSGRPKGFGYV 390
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+F + +EA+ A++A L GR + L+++
Sbjct: 391 QFSSVDEARAALEA-ENGADLGGRSIRLDFS 420
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +F+ N+S++ E+ + +LF KYG + + LP D ++ + KGF V F + A A
Sbjct: 342 ESDTLFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAA 401
Query: 395 YQHLDGTVFLGRMLHLIPGKPKE 417
+ +G GR + L PK+
Sbjct: 402 LEAENGADLGGRSIRLDFSTPKQ 424
>gi|29336045|ref|NP_444344.1| polyadenylate-binding protein 5 [Mus musculus]
gi|26341316|dbj|BAC34320.1| unnamed protein product [Mus musculus]
gi|76827669|gb|AAI07363.1| Poly(A) binding protein, cytoplasmic 5 [Mus musculus]
gi|76828194|gb|AAI07364.1| Poly(A) binding protein, cytoplasmic 5 [Mus musculus]
gi|148701502|gb|EDL33449.1| poly A binding protein, cytoplasmic 5 [Mus musculus]
Length = 381
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 155/411 (37%), Gaps = 80/411 (19%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
V +L VTED L K F GPL + D T G+ V F P A A ++
Sbjct: 21 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 80
Query: 401 TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTL 460
+ G+ L+ +P + RK N I +KNL
Sbjct: 81 DLINGKPFRLMWSQPDDRL-------------RKSGVGN----------IFIKNLDKTID 117
Query: 461 PTDLKALFEPFGDL--GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
L LF FG++ +V+ G K A F+SLA W
Sbjct: 118 NRALFYLFSAFGNILSCKVVCDDNG--------SKGYAYVHFDSLAAAN------RAIWH 163
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
GV ++ G+ K PE E E RE
Sbjct: 164 MNGVRLNNRQVYVGRFK--------------------------FPE--ERAAEVRTRERA 195
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +++KN + ++ + + F + GP SV V R KS G+GFV++ T E
Sbjct: 196 TFTNVFVKNFGDDIDDEKLNKLFSEYGPTESVKVIRDATGKSK------GFGFVRYETHE 249
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIP 694
+ +A+ L S+D + + R+ + +E A +R K + +G I ++N+
Sbjct: 250 AAQKAVLELHGKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKEKNRPSGVPIYIKNLD 309
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+++E F +FG + K M+ G +GFG V F + EA +A+
Sbjct: 310 ETINDEKLKEEFSSFGS---ISRAKVMMEVGQGKGFGVVCFSSFEEACKAV 357
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 45/185 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV+N + ++ L KLF +YGP E + I T K+KGF V + E A +A L
Sbjct: 200 VFVKNFGDDIDDEKLNKLFSEYGP-TESVKVIRDATGKSKGFGFVRYETHEAAQKAVLEL 258
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCC-ISERKLDAFNQVVEARSKRI-------- 449
G ++DGKV C +++K++ + + R +R+
Sbjct: 259 HGK-------------------SIDGKVLCVGRAQKKIERLAE-LRRRFERLKLKEKNRP 298
Query: 450 ----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAY 505
I +KNL LK F FG + R V ++ Q K F + +
Sbjct: 299 SGVPIYIKNLDETINDEKLKEEFSSFGSISRAKV----------MMEVGQGK-GFGVVCF 347
Query: 506 TKFKE 510
+ F+E
Sbjct: 348 SSFEE 352
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ ++ F G I S V + S GY +V F + + N+
Sbjct: 107 IFIKNLDKTIDNRALFYLFSAFGNILSCKVVCDDNG-------SKGYAYVHFDSLAAANR 159
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A+ + L+ Q+ + R E A R+ + T + + V+N ++
Sbjct: 160 AIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRE-----RATFTNVFVKNFGDDIDDEKL 214
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
+LF +G + V++ + G +GFGFV + T A++A+ L + G+ L +
Sbjct: 215 NKLFSEYGPTESVKVIRDATGK--SKGFGFVRYETHEAAQKAVLEL-HGKSIDGKVLCVG 271
Query: 763 WAE-EADNVEDIRKRTNR 779
A+ + + + ++R+R R
Sbjct: 272 RAQKKIERLAELRRRFER 289
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+++NL T+ ++ L + F +G ++ + + E + KGF +V F E A +A +
Sbjct: 303 IYIKNLDETINDEKLKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEACKAVDEM 360
Query: 399 DGTVFLGRMLHLIPGKPK 416
+G + + LH+ G+ +
Sbjct: 361 NGRIIGSKTLHVTLGQAR 378
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 26/175 (14%)
Query: 585 IKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ +L+ + TED + + F+ GP+ + R +SP +GYG+V F AL
Sbjct: 21 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSP-----LGYGYVNFRFPADAEWAL 75
Query: 645 KVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ ++ L + S+ RKS I ++N+ +
Sbjct: 76 NTMNFDLINGKPFRL------MWSQPDDRLRKSGV------GNIFIKNLDKTIDNRALFY 123
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
LF AFG + ++ GS +G+ +V F + A RA+ H+ G RL
Sbjct: 124 LFSAFGNILSCKVVCDDNGS---KGYAYVHFDSLAAANRAI------WHMNGVRL 169
>gi|428203044|ref|YP_007081633.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980476|gb|AFY78076.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 103
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VTE +L +F +YG + V LP D+ET + +GFA V A + L
Sbjct: 3 IYVGNLSYEVTEAELNSVFAEYGSVKRVHLPTDRETGRMRGFAFVEMETTAQEAAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG + GR L + KP+EN
Sbjct: 63 DGAEWYGRELKVNQAKPREN 82
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ ++ ++E+ +F +G +K V LP +G RGF FVE T + A++A
Sbjct: 3 IYVGNLSYEVTEAELNSVFAEYGSVKRVHLPTDR-ETGRMRGFAFVEMETTAQEAAAIEA 61
Query: 748 LCQSTHLYGRRLVLEWAEEADN 769
L YGR L + A+ +N
Sbjct: 62 L-DGAEWYGRELKVNQAKPREN 82
>gi|4850347|dbj|BAA77714.1| RNA-binding protein [Anabaena variabilis]
Length = 103
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NLSY VTED L +F +YG + V LP D+ET + +GF V T A + L
Sbjct: 3 VYVGNLSYDVTEDSLNPVFAEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KPKE+
Sbjct: 63 DGAEWMGRDLKVNKAKPKED 82
>gi|189190886|ref|XP_001931782.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973388|gb|EDU40887.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 704
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 159/429 (37%), Gaps = 114/429 (26%)
Query: 213 PVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLP-LASVRTT-------FLGMAYIG 264
P S AP H + ++ V L V + L F + +AS+R LG AY+
Sbjct: 36 PTSAAPAHNQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVN 95
Query: 265 FKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
+ ++ KAL + N + KGK I +D + + +G
Sbjct: 96 YNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTG--------------------- 134
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
G +F++NL + + L F +G + + D E +KG+ V
Sbjct: 135 ------------QGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQD-ELGNSKGYGFV 181
Query: 384 TFLMPEHATQAYQHLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
+ E A A +H++G VF+G H IP K + ++ E K +
Sbjct: 182 HYETAEAANNAIKHVNGMLLNEKKVFVG---HHIPKKERMSK----------FEEMKANF 228
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFL 491
N I VKN+ D + LFE GD+ + G G V ++
Sbjct: 229 TN----------IYVKNIDLDVSDEDFRDLFEKHGDITSASIARDDQGKSRGF-GFVNYI 277
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
+ A AA ++L T F+ LY+ G+ ++K+E E E ++ +
Sbjct: 278 KHEAASAAVDALNDTDFRGQKLYV----------------GRAQKKHEREEELRKQYEAA 321
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
++ QGV LYIKNLN + ++ +R F G I S
Sbjct: 322 RLEKQSKYQGV-------------------NLYIKNLNDDVDDEKLRDMFTPFGTITSAK 362
Query: 612 VARKKDPKS 620
V R P +
Sbjct: 363 VMRDAMPAA 371
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 156/391 (39%), Gaps = 83/391 (21%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V L +VTE L +LF G +A + + D T ++ G+A V + E +A
Sbjct: 47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ L+ TV I GKP C I + D + + + +KNL
Sbjct: 107 EELNYTV--------IKGKP------------CRIMWSQRDP---ALRKTGQGNVFIKNL 143
Query: 456 PYRTLPTDLKALFEPFGDLGRVLV-----PPYGITGLVEFLQKNQAKAAFNSLAYTKFKE 510
+ D KAL + F G +L G + F+ A+AA N++ +
Sbjct: 144 DHAI---DNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVN--- 197
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
G+ K+ G K E + EE K N
Sbjct: 198 ----------GMLLNEKKVFVGHHIPKKERMSKF--EEMKANF----------------- 228
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
T +Y+KN++ + +++ R F+K G I S ++AR K S G+G
Sbjct: 229 ----------TNIYVKNIDLDVSDEDFRDLFEKHGDITSASIARDDQGK------SRGFG 272
Query: 631 FVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-KSSNVAKQT---GS 686
FV + E+ + A+ L ++ ++ + R+ + E E K+ +++ + KQ+ G
Sbjct: 273 FVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGV 332
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
+ ++N+ ++ ++F FG + ++
Sbjct: 333 NLYIKNLNDDVDDEKLRDMFTPFGTITSAKV 363
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 28/201 (13%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ ++ F G I S VA+ + S GYGFV + T E+ N
Sbjct: 138 VFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNS------KGYGFVHYETAEAANN 191
Query: 643 ALKVLQNSSLDE------HQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
A+K + L+E H I K E K + I V+NI
Sbjct: 192 AIKHVNGMLLNEKKVFVGHHIPKKERMSKFEE------------MKANFTNIYVKNIDLD 239
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
+ +LF+ G++ + + G RGFGFV +I A A+ AL T G
Sbjct: 240 VSDEDFRDLFEKHGDITSASIARD--DQGKSRGFGFVNYIKHEAASAAVDAL-NDTDFRG 296
Query: 757 RRLVLEWAEEA-DNVEDIRKR 776
++L + A++ + E++RK+
Sbjct: 297 QKLYVGRAQKKHEREEELRKQ 317
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 14 HISLLDLDEVEFIYKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQA 73
++ +DLD ++ E + FE+ G +T + +GK R F F+ Y + + A A
Sbjct: 232 YVKNIDLD-------VSDEDFRDLFEKHGDITSASIARDDQGKSRGFGFVNYIKHEAASA 284
Query: 74 ALDYFNNTYVFSSRIKVEKC 93
A+D N+T ++ V +
Sbjct: 285 AVDALNDTDFRGQKLYVGRA 304
>gi|115398367|ref|XP_001214775.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192966|gb|EAU34666.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 701
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L + T + LT+ F + + + +D ET K+KG+ VTF + A A +
Sbjct: 22 LFVRSLPASTTTESLTEYFSQSYVIKHALAVLDPETKKSKGYGFVTFADVDDAKAALEEY 81
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCIS-----ERKLDAFNQVVEARSKRIILVK 453
+G+VF G+ + + +P+ +D + + ERK Q A+ ++I V+
Sbjct: 82 NGSVFEGKKIKVDYAQPRHR--TIDESLGKSVPSSEALERKKQREQQRAAAQPPKLI-VR 138
Query: 454 NLPYRTL-PTDLKALFEPFGDLGRVLVPPYG--ITGLVEFLQKNQAKAAFNSLAYTKFKE 510
NLP+ P DL LF FG + + +P G + G F+ K A +LA KE
Sbjct: 139 NLPWSIKEPDDLAVLFRSFGKVKQATLPKKGGQLAGF-GFVILRGKKNAEKALAAVNGKE 197
Query: 511 V---PLYLEWAPE 520
V L ++WA E
Sbjct: 198 VDGRTLAVDWAVE 210
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
+P TL++++L ++T +S+ +F + I DP++ S GYGFV F
Sbjct: 17 QPRRTLFVRSLPASTTTESLTEYFSQSYVIKHALAVL--DPETKK---SKGYGFVTFADV 71
Query: 638 ESLNQALKVLQNSSLDEHQIELKRS---NRNLE---------SEATTVK--RKSSNVAKQ 683
+ AL+ S + +I++ + +R ++ SEA K R+ A Q
Sbjct: 72 DDAKAALEEYNGSVFEGKKIKVDYAQPRHRTIDESLGKSVPSSEALERKKQREQQRAAAQ 131
Query: 684 TGSKILVRNIPFQAKQ-SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
K++VRN+P+ K+ ++ LF++FG++K LPKK G GFGFV K A+
Sbjct: 132 P-PKLIVRNLPWSIKEPDDLAVLFRSFGKVKQATLPKK---GGQLAGFGFVILRGKKNAE 187
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEADNVEDIRK 775
+A+ A+ + GR L ++WA E ED++K
Sbjct: 188 KALAAV-NGKEVDGRTLAVDWAVEKKVWEDLQK 219
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 20/196 (10%)
Query: 225 HTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL--------GMAYIGFKDEKNCNKALN 276
T+ V++LPA + L YF + L G ++ F D + AL
Sbjct: 20 RTLFVRSLPASTTTESLTEYFSQSYVIKHALAVLDPETKKSKGYGFVTFADVDDAKAALE 79
Query: 277 K-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
+ N S ++GK++ + D + D++ S+ + +A K Q + + A A+
Sbjct: 80 EYNGSVFEGKKIKV-----DYAQPRHRTIDESLGKSVPSSEALERKKQREQQRAA---AQ 131
Query: 336 SGRIFVRNLSYTVTE-DDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
++ VRNL +++ E DDL LF +G + + LP K+ + GF V ++A +A
Sbjct: 132 PPKLIVRNLPWSIKEPDDLAVLFRSFGKVKQATLP--KKGGQLAGFGFVILRGKKNAEKA 189
Query: 395 YQHLDGTVFLGRMLHL 410
++G GR L +
Sbjct: 190 LAAVNGKEVDGRTLAV 205
>gi|113475531|ref|YP_721592.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110166579|gb|ABG51119.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 89
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NLSY T++DL F KYG + V +P D+ET + +GFA V + T A + L
Sbjct: 3 VYVGNLSYDATDEDLKTAFAKYGNVKRVQVPNDRETGRPRGFAFVEMESEDEETAAIEGL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG+ +GR+L + +P+E G+
Sbjct: 63 DGSELMGRILKVNKARPREERGS 85
>gi|303390218|ref|XP_003073340.1| polyadenylate binding protein 2 [Encephalitozoon intestinalis ATCC
50506]
gi|303302486|gb|ADM11980.1| polyadenylate binding protein 2 [Encephalitozoon intestinalis ATCC
50506]
Length = 420
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 681 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 740
+++ +K+L+RN+PFQA + +V ++F +F + VR+P K G+ RGF FV F + E
Sbjct: 338 SRKGTNKLLIRNVPFQASKEDVRKIFDSFHVVN-VRIPVKREGTS--RGFCFVTFQSPEE 394
Query: 741 AKRAMKALCQSTHLYGRRLVLEWA 764
A++ STHLYGRRLVLE A
Sbjct: 395 VSAAIEYFGSSTHLYGRRLVLEKA 418
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E+++ +F + G +TDV + +GKFRR FIGY E A+ Y + + + +I+
Sbjct: 21 TKEEIEKEFSKHGKITDVFMVNNEQGKFRRICFIGYIEEKDGMEAIKYRDGSMFKNHKIR 80
Query: 90 VEKCSNLGDTTKPKSW 105
E TTK S+
Sbjct: 81 CE-------TTKEDSY 89
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 105/472 (22%), Positives = 188/472 (39%), Gaps = 123/472 (26%)
Query: 227 IVVKNLPAGVKKKDLKAYFKP-------LPLASVRTTFLGMAYIGFKDEKNCNKALNKNK 279
IVVKNLP K++++ F + + + F + +IG+ +EK+ +A+
Sbjct: 11 IVVKNLPESTTKEEIEKEFSKHGKITDVFMVNNEQGKFRRICFIGYIEEKDGMEAI---- 66
Query: 280 SFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRI 339
KY G+ N+ E K +++ E + I S +I
Sbjct: 67 -----------KYR-------DGSMFKNHKIRCETTKEDSYETSESEERM---IRYSRKI 105
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEV-ILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
F+RN+ E ++ +F++YG + EV +LP + KG A V F E A +AY+ +
Sbjct: 106 FIRNIPADADERFISDVFKEYGEVEEVGLLP----RHEGKG-AYVKFSKGECALEAYRKV 160
Query: 399 DGTVFLGRMLHLIP----GKPKENEG------NVDGKV-HCCISER-----KLDAFNQVV 442
+ G + P G+ +E+E N + V C SER +D ++ +
Sbjct: 161 --KLIGGVKPRMRPWKDRGEKREHEHYNTLFFNFESVVKKICESERIGIKDLVDVNDKDL 218
Query: 443 EARSKRI----------ILVKN---LPYRTLPTDLKALFEPFGDLGRVL----------V 479
AR R L N L + T D K L +L + L +
Sbjct: 219 GARMARAETHLVQETKEFLENNGIYLDHLTGSVDRKKLIVRNMELMKCLDLVDNGCKISI 278
Query: 480 PPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNE 539
P L++F + AK + L+ + +E +Y E+AP A K
Sbjct: 279 APSKCLALLKFDSEEDAKRCYKKLSLRRMREHVIYCEYAP---ICNAPSKR--------- 326
Query: 540 EEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRR 599
EE KE+T E+ +++G L I+N+ F ++++ +R+
Sbjct: 327 ------EEPPKEHT-EKKSRKGT------------------NKLLIRNVPFQASKEDVRK 361
Query: 600 HFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSS 651
F + +V + K++ S G+ FV F + E ++ A++ +S+
Sbjct: 362 IFDS-FHVVNVRIPVKREG------TSRGFCFVTFQSPEEVSAAIEYFGSST 406
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+ ++ +RN+ + +++D+ K+F+ + + V +P+ +E ++GF VTF PE + A
Sbjct: 342 TNKLLIRNVPFQASKEDVRKIFDSFH-VVNVRIPVKREGT-SRGFCFVTFQSPEEVSAAI 399
Query: 396 QHLDGTVFL-GRMLHL 410
++ + L GR L L
Sbjct: 400 EYFGSSTHLYGRRLVL 415
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+ +KNL ++T++ I + F K G I V + + G+F + F+ + + +
Sbjct: 11 IVVKNLPESTTKEEIEKEFSKHGKITDVFMVNNEQ----GKFRRIC--FIGYIEEKDGME 64
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A+K S H+I + + E + +S + KI +RNIP A + +
Sbjct: 65 AIKYRDGSMFKNHKIRCETTK-----EDSYETSESEERMIRYSRKIFIRNIPADADERFI 119
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGF 730
++FK +GE++ V L + G G + F
Sbjct: 120 SDVFKEYGEVEEVGLLPRHEGKGAYVKF 147
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
RI V+NL + T++++ K F K+G + +V + ++ E K + + ++ + +A ++
Sbjct: 10 RIVVKNLPESTTKEEIEKEFSKHGKITDVFM-VNNEQGKFRRICFIGYIEEKDGMEAIKY 68
Query: 398 LDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
DG++F + K E + SE ++ R R I ++N+P
Sbjct: 69 RDGSMFKNHKIRCETTKEDSYETSE--------SEERM--------IRYSRKIFIRNIPA 112
Query: 458 RTLPTDLKALFEPFGDLGRV-LVPPY-GITGLVEFLQKNQAKAAFNSL 503
+ +F+ +G++ V L+P + G V+F + A A+ +
Sbjct: 113 DADERFISDVFKEYGEVEEVGLLPRHEGKGAYVKFSKGECALEAYRKV 160
>gi|443318092|ref|ZP_21047374.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442782317|gb|ELR92375.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 108
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NLSY TE+DLT++F++YG + V +P+D+ET + +GFA V A + L
Sbjct: 3 VYVGNLSYNATEEDLTEVFKEYGAVKRVQVPVDRETGRMRGFAFVEMSEDAEENAAIEDL 62
Query: 399 DGTVFLGRMLHLIPGKPK 416
DG ++GR L + +P+
Sbjct: 63 DGAEWMGRTLKVNKARPR 80
>gi|17232175|ref|NP_488723.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|6274493|gb|AAF06670.1|AF196328_2 RbpD [Nostoc sp. PCC 7120]
gi|1064777|dbj|BAA08402.1| RNA-binding protein [Anabaena variabilis]
gi|17133820|dbj|BAB76382.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 110
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I++ NLSY VTE+DL F +YG ++ V LP D+ET + +GFA V T A + L
Sbjct: 3 IYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG ++GR L + KP+E
Sbjct: 63 DGAEWMGRDLKVNKAKPRE 81
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTE-GKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y++T+E LK F E G V+ VQL E G+ R FAF+ E Q AA++ +
Sbjct: 10 YQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEALDGAEWMG 69
Query: 86 SRIKVEKC 93
+KV K
Sbjct: 70 RDLKVNKA 77
>gi|347966748|ref|XP_321180.5| AGAP001883-PA [Anopheles gambiae str. PEST]
gi|333469916|gb|EAA01735.5| AGAP001883-PA [Anopheles gambiae str. PEST]
Length = 396
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 17/174 (9%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ--FLSMGYGFVQFYTRE 638
T L + L TE+ IR F G + SV + R K+ PGQ S+GYGFV ++ +
Sbjct: 74 TNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNYHRPQ 133
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
QA+ VL L+ N+ L+ + R SS K G+ + + +P
Sbjct: 134 DAEQAVNVLNG---------LRLQNKVLK---VSFARPSSEGIK--GANLYISGLPKTIT 179
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
Q E+E +F+ +GE+ R+ + G+ +G GF+ F + EA+RA++AL +T
Sbjct: 180 QEELETIFRPYGEIITSRVLIQD-GNDKPKGVGFIRFDQRKEAERAIQALNGTT 232
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 40/182 (21%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKET-------DKTKGFALVTFLMPEHA 391
+ V L T+TE+++ LF G + V L DK ++ G+ V + P+ A
Sbjct: 76 LIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNYHRPQDA 135
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
QA L+G ++L + +P S + N +
Sbjct: 136 EQAVNVLNGLRLQNKVLKVSFARP---------------SSEGIKGAN----------LY 170
Query: 452 VKNLPYRTLPTDLKALFEPFGDL--GRVLVP-----PYGITGLVEFLQKNQAKAAFNSLA 504
+ LP +L+ +F P+G++ RVL+ P G+ G + F Q+ +A+ A +L
Sbjct: 171 ISGLPKTITQEELETIFRPYGEIITSRVLIQDGNDKPKGV-GFIRFDQRKEAERAIQALN 229
Query: 505 YT 506
T
Sbjct: 230 GT 231
Score = 39.3 bits (90), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 327 VQFAEDIAES---GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
V FA +E +++ L T+T+++L +F YG + + I DK KG +
Sbjct: 154 VSFARPSSEGIKGANLYISGLPKTITQEELETIFRPYGEIITSRVLIQDGNDKPKGVGFI 213
Query: 384 TFLMPEHATQAYQHLDGT 401
F + A +A Q L+GT
Sbjct: 214 RFDQRKEAERAIQALNGT 231
>gi|212546733|ref|XP_002153520.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
gi|210065040|gb|EEA19135.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
Length = 472
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 103/190 (54%), Gaps = 13/190 (6%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+ L+I NL++N E+ +RR F+ G ++ V + +++ S G+G+V++ S
Sbjct: 224 SNLFIGNLSWNIDEEWLRREFESFGELSGVRIMTERE-----TGRSRGFGYVEYADAASA 278
Query: 641 NQALKVLQNSSLDEHQIEL---KRSNRNLESEATTVKRKSSNVAKQT---GSKILVRNIP 694
A + +++ LD I L K + N ++ + ++ + QT + + + N+
Sbjct: 279 KAAYEAKKDTELDGRTINLDYAKPRDANAQAPREKAQTRARSFGDQTSPESNTLFLGNLV 338
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
F ++ V E+F++ G ++ +RLP +G +G+G+VEF + +EA++A+ L Q T +
Sbjct: 339 FGVDENAVREVFESQGTIQGIRLPTDPE-TGRPKGYGYVEFSSVDEARQALNDL-QGTDI 396
Query: 755 YGRRLVLEWA 764
GR + L+++
Sbjct: 397 GGRAIRLDFS 406
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 314 NIKAKHWKSQEDSVQFAEDIA-ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDK 372
N +A K+Q + F + + ES +F+ NL + V E+ + ++FE G + + LP D
Sbjct: 306 NAQAPREKAQTRARSFGDQTSPESNTLFLGNLVFGVDENAVREVFESQGTIQGIRLPTDP 365
Query: 373 ETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
ET + KG+ V F + A QA L GT GR + L
Sbjct: 366 ETGRPKGYGYVEFSSVDEARQALNDLQGTDIGGRAIRL 403
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +F+ NLS+ + E+ L + FE +G L+ V + ++ET +++GF V + A AY
Sbjct: 223 SSNLFIGNLSWNIDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADAASAKAAY 282
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNL 455
+ T GR ++L KP+ + + + ++ + +F S + L NL
Sbjct: 283 EAKKDTELDGRTINLDYAKPR----DANAQAPREKAQTRARSFGDQTSPESNTLFL-GNL 337
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAYTKF 508
+ ++ +FE G + + +P P G G VEF ++A+ A N L T
Sbjct: 338 VFGVDENAVREVFESQGTIQGIRLPTDPETGRPKGY-GYVEFSSVDEARQALNDLQGTDI 396
Query: 509 KEVPLYLEWA 518
+ L+++
Sbjct: 397 GGRAIRLDFS 406
>gi|440755781|ref|ZP_20934983.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|440175987|gb|ELP55356.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IFV NLSY +++DDL ++F YG + V +P+DKET + +GFA V T+A L
Sbjct: 3 IFVGNLSYDISQDDLVEVFTDYGKVQRVHIPVDKETQRKRGFAFVEMENKAQETKAIAAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR + + + +E +G
Sbjct: 63 DGAEWMGRAIKVNEARDREERAPFNG 88
>gi|392512799|emb|CAD26357.2| POLYADENYLATE BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1]
Length = 413
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
KR + Q +K+L+RN+PFQA + E+ ++F +F + VR+P K GS RGF FV
Sbjct: 324 KRPPEEASGQLMNKLLIRNVPFQASKEEIRKIFGSFHVVD-VRIPVKREGSS--RGFCFV 380
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+ ++ A++ STHLYGRRLVLE A
Sbjct: 381 TLNSPDDVTAAIEHFGSSTHLYGRRLVLERA 411
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E+++ +F G +TDV + +GKFRR F+GY E A+ Y + + + RI
Sbjct: 13 TKEEIEKEFSRHGKITDVFMARNEQGKFRRICFVGYMEEKDGVEAIRYRDGSLFKNQRIA 72
Query: 90 VE 91
E
Sbjct: 73 CE 74
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+ +KNL ++T++ I + F + G I V +AR + G+F + FV + + +
Sbjct: 3 IVVKNLPASTTKEEIEKEFSRHGKITDVFMARNEQ----GKFRRIC--FVGYMEEKDGVE 56
Query: 643 ALKVLQNSSLDEHQI---ELKRSNRNL-ESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
A++ S +I E++ + + ESE +K KI +RN+P +A
Sbjct: 57 AIRYRDGSLFKNQRIACEEVREGSPEIGESEERMIK---------YSRKIFIRNVPAEAN 107
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
+ V ++FK +GE++ V L + G G + F
Sbjct: 108 EQFVRDVFKEYGEIEEVGLLDRREGKGAYVKF 139
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 141/348 (40%), Gaps = 95/348 (27%)
Query: 227 IVVKNLPAGVKKKDLKAYF----KPLPLASVRT---TFLGMAYIGFKDEKNCNKALN-KN 278
IVVKNLPA K++++ F K + R F + ++G+ +EK+ +A+ ++
Sbjct: 3 IVVKNLPASTTKEEIEKEFSRHGKITDVFMARNEQGKFRRICFVGYMEEKDGVEAIRYRD 62
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
S +K +++ A ++ S E +S+E +++ S +
Sbjct: 63 GSLFKNQRI---------------ACEEVREGSPEI-----GESEERMIKY------SRK 96
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IF+RN+ E + +F++YG + EV L +D+ K A V F E A +AY+ +
Sbjct: 97 IFIRNVPAEANEQFVRDVFKEYGEIEEVGL-LDRREGKG---AYVKFSRGECALEAYRKV 152
Query: 399 DGTVFLGRM-LHLIPGKPKENEGNVDG-----------KVHCCISER-----KLDAFNQV 441
F+G + + P K + + + C SER +D ++
Sbjct: 153 Q---FIGGVKARMCPWKDRAEKRQYEHYNTLFFSFESIVKRICESERVSIRDVVDVNDKD 209
Query: 442 VEARSKRI------------------------------ILVKNLPYRTLPTDLKALFEPF 471
+ AR RI ++V+N+ +L +
Sbjct: 210 LGARMARIETHLVQETKKFLESNGIYLDHLTGSVDRNMLIVRNM-------ELMKCLDLV 262
Query: 472 GDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAP 519
D ++ V P L++F ++ A+ + L+ + KE +Y E+AP
Sbjct: 263 DDRCKISVAPSKCLALLKFDKEEDARRCYRKLSLKRVKEHVVYCEYAP 310
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T LY+KN+N +T++ + F + GPI S ++ + D K G+GFV + E
Sbjct: 219 TNLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDADGK------LKGFGFVNYENHEDA 272
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQ 696
+A++ L S L+ ++ + R+ + E K+ + +AK G + V+N+
Sbjct: 273 VKAVEALNESDLNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDS 332
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
++EE F +G + ++ + +G +GFGFV F T EA +A+ Q + G
Sbjct: 333 VDDEKLEEEFAPYGTITSAKVMRSE--NGKSKGFGFVCFSTPEEATKAITEKNQQI-VAG 389
Query: 757 RRLVLEWAEEAD 768
+ L + A+ D
Sbjct: 390 KPLYVAIAQRKD 401
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 157/434 (36%), Gaps = 108/434 (24%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRT-------TFLGMAYIGFKDEKNCNKALNK 277
++ V +L V + L F P+ ++S+R T LG AY+ F D + KA+++
Sbjct: 39 SLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIDQ 98
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N + KG+ I +D S + G S
Sbjct: 99 LNYTPIKGRLCRIMWSQRDPSLRKKG---------------------------------S 125
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G IF++NL + L F +G + + D E K+KGF V F A +A
Sbjct: 126 GNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAID 184
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-ILVKNL 455
L+G + G+ +++ P H ER +Q+ E ++ + VKN+
Sbjct: 185 ALNGMLLNGQEIYVAP--------------HLSRKERD----SQLEETKAHYTNLYVKNI 226
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSLAYTKFKE 510
T + +F FG + + G V + A A +L +
Sbjct: 227 NSETTDEKFQEMFAQFGPIVSASLEKDADGKLKGFGFVNYENHEDAVKAVEALNESDLNG 286
Query: 511 VPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVE 570
LY+ G+ ++KNE ++ + + QGV
Sbjct: 287 EKLYV----------------GRAQKKNERMHVLKKQYEAYRLEKMAKYQGV-------- 322
Query: 571 EDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYG 630
L++KNL+ + ++ + F G I S V R ++ K S G+G
Sbjct: 323 -----------NLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRSENGK------SKGFG 365
Query: 631 FVQFYTRESLNQAL 644
FV F T E +A+
Sbjct: 366 FVCFSTPEEATKAI 379
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 23/170 (13%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L +E + F G ++S+ V R K+ S+GY +V F E+
Sbjct: 38 ASLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKT-----SLGYAYVNFNDHEAG 92
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A+ L + + + S R+ ++++K S I ++N+
Sbjct: 93 RKAIDQLNYTPIKGRLCRIMWSQRD-----PSLRKKGS-------GNIFIKNLHPDIDNK 140
Query: 701 EVEELFKAFGELKFVRLPKKMVG--SGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F FG++ L K+ +G +GFGFV F + AK A+ AL
Sbjct: 141 ALYDTFSVFGDI----LSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 90/198 (45%), Gaps = 26/198 (13%)
Query: 221 KRQYHTIVVKNLPAGV---KKKDLKAYFKPLPLASVR----TTFLGMAYIGFKDEKNCNK 273
K Y + VKN+ + K +++ A F P+ AS+ G ++ +++ ++ K
Sbjct: 215 KAHYTNLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDADGKLKGFGFVNYENHEDAVK 274
Query: 274 ALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
A+ N+S G++L + + K N M +K ++ + + + +
Sbjct: 275 AVEALNESDLNGEKLYVGRAQKKNE-------------RMHVLKKQYEAYRLEKMAKYQG 321
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ +FV+NL +V ++ L + F YG + + + E K+KGF V F PE AT
Sbjct: 322 V----NLFVKNLDDSVDDEKLEEEFAPYGTITSAKV-MRSENGKSKGFGFVCFSTPEEAT 376
Query: 393 QAYQHLDGTVFLGRMLHL 410
+A + + G+ L++
Sbjct: 377 KAITEKNQQIVAGKPLYV 394
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
A H +E Q E A ++V+N++ T++ ++F ++GP+ L D + K
Sbjct: 199 APHLSRKERDSQLEETKAHYTNLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDAD-GK 257
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
KGF V + E A +A + L+ + G L++ + K+NE ++H + +++ +
Sbjct: 258 LKGFGFVNYENHEDAVKAVEALNESDLNGEKLYVGRAQ-KKNE-----RMH--VLKKQYE 309
Query: 437 AFNQVVEARSKRI-ILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEF 490
A+ A+ + + + VKNL L+ F P+G + +V+ G + G V F
Sbjct: 310 AYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRSENGKSKGFGFVCF 369
Query: 491 LQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+A A PLY+ A
Sbjct: 370 STPEEATKAITEKNQQIVAGKPLYVAIA 397
>gi|367020688|ref|XP_003659629.1| hypothetical protein MYCTH_2296912 [Myceliophthora thermophila ATCC
42464]
gi|347006896|gb|AEO54384.1| hypothetical protein MYCTH_2296912 [Myceliophthora thermophila ATCC
42464]
Length = 327
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 108/254 (42%), Gaps = 36/254 (14%)
Query: 535 KEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEED------EEREP----------- 577
++K EE + EE E A D +Q V E N E D E P
Sbjct: 62 EDKQLEEAQRRSEEDFERQAAADARQDVEEAIANTEADIQEAMQESSFPSNASQAVKAKP 121
Query: 578 -----EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
E T +++N+ F +E+ + + F K G + V +AR DP+ +S GYGFV
Sbjct: 122 AAGGQESQNTAFVRNIVFELSEEHLTKAFSKYGNVTKVYIAR--DPRG----MSKGYGFV 175
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIE-LKRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
F T E L A + S +I + R+ +E + K N ++ V
Sbjct: 176 SFETPEELKAACDNVNGSFWHGRRITCIPRA-----TEGRQKQTKHRNSPDHPTQQLFVG 230
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
NIP++ +E+ LF+ L+ VR+ +G RGF +F T A A K L +
Sbjct: 231 NIPYETTDAELNRLFRGMDNLEDVRVAVDRT-TGWPRGFAHADFTTVEAAIEAKKKL-EG 288
Query: 752 THLYGRRLVLEWAE 765
L R L +++AE
Sbjct: 289 AKLGNRVLRIDFAE 302
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 28/216 (12%)
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
FVRN+ + ++E+ LTK F KYG + +V + D +KG+ V+F PE A +++
Sbjct: 133 FVRNIVFELSEEHLTKAFSKYGNVTKVYIARDPR-GMSKGYGFVSFETPEELKAACDNVN 191
Query: 400 GTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRT 459
G+ + GR + I P+ EG R+ ++ + + V N+PY T
Sbjct: 192 GSFWHGRRITCI---PRATEG------------RQKQTKHRNSPDHPTQQLFVGNIPYET 236
Query: 460 LPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAFNSLAYTKFKEVPL 513
+L LF +L V V TG +F A A L K L
Sbjct: 237 TDAELNRLFRGMDNLEDVRVAVDRTTGWPRGFAHADFTTVEAAIEAKKKLEGAKLGNRVL 296
Query: 514 YLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEK 549
++ FAE + GK + ++ G E + +
Sbjct: 297 RID------FAEGYTRKIGKSRNQSSGRGHEAQNSR 326
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 26/153 (16%)
Query: 259 GMAYIGFKDEKNCNKAL-NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKA 317
G ++ F+ + A N N SFW G+++ + + K +
Sbjct: 171 GYGFVSFETPEELKAACDNVNGSFWHGRRITCIPRATEGRQK----------------QT 214
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
KH S + Q ++FV N+ Y T+ +L +LF L +V + +D+ T
Sbjct: 215 KHRNSPDHPTQ---------QLFVGNIPYETTDAELNRLFRGMDNLEDVRVAVDRTTGWP 265
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+GFA F E A +A + L+G R+L +
Sbjct: 266 RGFAHADFTTVEAAIEAKKKLEGAKLGNRVLRI 298
>gi|443477523|ref|ZP_21067364.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017338|gb|ELS31803.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 111
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT+D L +FE YG + V P D+ET + +GFA V A L
Sbjct: 3 IYVGNLSYEVTQDHLKPVFEDYGKVTRVHFPTDRETGRARGFAFVEMSQDAEEDAAITAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR+L + KP+EN
Sbjct: 63 DGAEWMGRVLKVNKAKPREN 82
>gi|401827276|ref|XP_003887730.1| RNA binding domain-containing protein [Encephalitozoon hellem ATCC
50504]
gi|392998737|gb|AFM98749.1| RNA binding domain-containing protein [Encephalitozoon hellem ATCC
50504]
Length = 411
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
Q +K+L+RN+PFQA + E+ +F +F + VR+P K G+ RGF FV + +E
Sbjct: 331 QPINKLLIRNVPFQASEEEIRRMFNSFHVVD-VRIPVKREGTS--RGFCFVTLGSPDEVT 387
Query: 743 RAMKALCQSTHLYGRRLVLEWA 764
A+K STHLYGRRLVLE A
Sbjct: 388 AAIKHFGSSTHLYGRRLVLEKA 409
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 179/452 (39%), Gaps = 123/452 (27%)
Query: 227 IVVKNLPAGVKKKDL-KAYFKPLPLASV------RTTFLGMAYIGFKDEKNCNKALN-KN 278
IVVK+LP K+++ K + K + V R F + +IG+ EK +A+ ++
Sbjct: 3 IVVKDLPESTTKEEVEKEFSKHGKITDVFMAKNERGKFRRICFIGYMGEKEGMEAIRYRD 62
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
S +K +++ A GAA + +S+E +++ S +
Sbjct: 63 GSLFKNQKIRC-------EALREGAAQTS-------------ESEERMIKY------SRK 96
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IF+RN+ E + +F++YG + EV L +E KG A V F E A +AY+++
Sbjct: 97 IFIRNIPTESDEQLIHDVFKEYGEIEEVGLLDLRE---RKG-AYVKFSKGECALEAYRNV 152
Query: 399 DGTVFLGRMLHLIPGKPKENEG----------NVDGKV-HCCISERKLDAFNQVVEARSK 447
+ G + P K K +G N + V C SER ++V+ K
Sbjct: 153 --KIIGGMKARMFPWKDKAEKGRYEHYNTLFFNFESIVKRICESER--IGIKELVDVNDK 208
Query: 448 ----RIILVKN----------------LPYRTLPTDLKALFEPFGDLGRVL--------- 478
R+ L++ L T TD K L +L + L
Sbjct: 209 DLGTRMALIETHLVQETKEFLENNGIYLDNLTGDTDKKTLIIRNMELMKCLDLIDSRCKI 268
Query: 479 -VPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEK 537
+ P L++F ++ +A+ + L + KE +Y E+AP +++
Sbjct: 269 SIAPSKCLALLKFEEEEEARKCYRKLNLKRMKEQVIYCEYAPMCNVSKS----------- 317
Query: 538 NEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSI 597
E + ED+ R+ +P L I+N+ F ++E+ I
Sbjct: 318 ---------------------------TREEMPEDKPRKGQPINKLLIRNVPFQASEEEI 350
Query: 598 RRHFKKCGPIASVTVARKKDPKSPG-QFLSMG 628
RR F + V + K++ S G F+++G
Sbjct: 351 RRMFNS-FHVVDVRIPVKREGTSRGFCFVTLG 381
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E+++ +F + G +TDV + GKFRR FIGY E + A+ Y + + + +I+
Sbjct: 13 TKEEVEKEFSKHGKITDVFMAKNERGKFRRICFIGYMGEKEGMEAIRYRDGSLFKNQKIR 72
Query: 90 VE 91
E
Sbjct: 73 CE 74
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 7/187 (3%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++ NL++N ED +RR F+ G I V ++ + G+G+V+F +
Sbjct: 237 LFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRE-----TGRAKGFGYVEFAKAADAAK 291
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A K + LD + + S + +A K + + + + N+ F +
Sbjct: 292 AQKDMHEYELDGRPLNVDFSTPRQKPDANARANKFGDKRSAPSNTLFIGNLSFDCTNETI 351
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
+E+F +G + V LP SG +GFG+V+F ++ EA A++AL + GR L ++
Sbjct: 352 QEVFAEYGNVTRVSLPTDR-DSGALKGFGYVDFGSQEEATAALEAL-HGQDVAGRPLRVD 409
Query: 763 WAEEADN 769
+A D+
Sbjct: 410 FAAPRDD 416
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
A S +F+ NLS+ T + + ++F +YG + V LP D+++ KGF V F E AT
Sbjct: 332 APSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATA 391
Query: 394 AYQHLDGTVFLGRMLHLIPGKPKEN 418
A + L G GR L + P+++
Sbjct: 392 ALEALHGQDVAGRPLRVDFAAPRDD 416
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 331 EDIAESG--RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP 388
E +AE G +FV NLS+ + ED L + FE +G + + D+ET + KGF V F
Sbjct: 227 EPVAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKA 286
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
A +A + + GR L++ P++ + + + F A S
Sbjct: 287 ADAAKAQKDMHEYELDGRPLNVDFSTPRQKPD----------ANARANKFGDKRSAPSN- 335
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAFNS 502
+ + NL + ++ +F +G++ RV +P +G V+F + +A AA +
Sbjct: 336 TLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAALEA 395
Query: 503 LAYTKFKEVPLYLEWA 518
L PL +++A
Sbjct: 396 LHGQDVAGRPLRVDFA 411
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P TL+I NL+F+ T ++I+ F + G + V++ +D + G+G+V F ++E
Sbjct: 333 PSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGA-----LKGFGYVDFGSQE 387
Query: 639 SLNQALKVLQNSSL 652
AL+ L +
Sbjct: 388 EATAALEALHGQDV 401
>gi|428320405|ref|YP_007118287.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
gi|428244085|gb|AFZ09871.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
Length = 95
Score = 69.7 bits (169), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I++ NLSY TE+DL +F +YG + V+LP D+ET + +GFA V + A L
Sbjct: 3 IYIGNLSYRATEEDLKAVFAEYGTVKRVVLPTDRETGRMRGFAFVEMMEDAQEDAAIAEL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG ++GR L + KPKE EGN
Sbjct: 63 DGAEWMGRPLRVNKAKPKE-EGN 84
>gi|428210908|ref|YP_007084052.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|427999289|gb|AFY80132.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 109
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VTE DL +F +YG + V LP D+ET + +GF V T A + L
Sbjct: 3 IYVGNLSYDVTEQDLNSVFAEYGTVKRVNLPTDRETGRPRGFGFVEMDTDAEETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KP+E+
Sbjct: 63 DGAEWMGRDLKVNKAKPRED 82
>gi|425783198|gb|EKV21057.1| Nucleolin protein Nsr1, putative [Penicillium digitatum Pd1]
Length = 467
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 12/187 (6%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+I NL++N E+ ++R F + G ++ V + ++ S G+G+V++ + +
Sbjct: 213 LFIGNLSWNVDEEWVQREFSEFGELSGVRIVTDRE-----TGRSRGFGYVEYNSAADAAK 267
Query: 643 ALKVLQNSSLDEHQIEL-----KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
A++ + + LD I L +++N + R + + V N+PF A
Sbjct: 268 AMEAKKGTDLDGRTINLDYAAPRQANTQGADRSQDRARSYGDQTSPESDTLFVGNLPFSA 327
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ + E+F A G + +RLP + +G +GFG+V+F + +EAK A AL L GR
Sbjct: 328 TEDALHEVFGAQGSVLGIRLPTEQE-TGRPKGFGYVQFSSIDEAKAAHAAL-NGHELEGR 385
Query: 758 RLVLEWA 764
+ L+++
Sbjct: 386 AIRLDFS 392
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 321 KSQEDSVQFAEDIA-ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKG 379
+SQ+ + + + + ES +FV NL ++ TED L ++F G + + LP ++ET + KG
Sbjct: 299 RSQDRARSYGDQTSPESDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKG 358
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
F V F + A A+ L+G GR + L
Sbjct: 359 FGYVQFSSIDEAKAAHAALNGHELEGRAIRL 389
>gi|448519634|ref|XP_003868121.1| poly(A)-binding protein [Candida orthopsilosis Co 90-125]
gi|380352460|emb|CCG22686.1| poly(A)-binding protein [Candida orthopsilosis]
Length = 638
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 15/193 (7%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T +Y+KN++ +E F G I S+ + + +D KS G+GFV + +S
Sbjct: 242 TNIYVKNIDLEFSEKEFEDLFAPYGKITSIYLEKDQDGKS------KGFGFVNYEEHKSA 295
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQ 696
+A++ L + ++ +I + R+ + E K+ + ++K G + V+N+ Q
Sbjct: 296 VEAVEALNDKEINGQKIYVGRAQKKRERTEELKKQYEAIRLEKLSKYQGVNLFVKNLDDQ 355
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
++EE FK FG + ++ MV +G RGFGFV F T EA +A+ + Q +
Sbjct: 356 IDSEKLEEEFKPFGTITSAKV---MVDDAGKSRGFGFVCFSTPEEATKAITEMNQRM-VN 411
Query: 756 GRRLVLEWAEEAD 768
G+ L + A+ D
Sbjct: 412 GKPLYVALAQRKD 424
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 13/207 (6%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
KH ++ +F E A I+V+N+ +E + LF YG + + L D++ K
Sbjct: 222 GKHVSKKDRESKFEEMKANYTNIYVKNIDLEFSEKEFEDLFAPYGKITSIYLEKDQD-GK 280
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KGF V + + A +A + L+ G+ +++ + K K + I KL
Sbjct: 281 SKGFGFVNYEEHKSAVEAVEALNDKEINGQKIYVGRAQKKRERTEELKKQYEAIRLEKLS 340
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFL 491
+ V + VKNL + L+ F+PFG + +V+V G + G V F
Sbjct: 341 KYQGVN-------LFVKNLDDQIDSEKLEEEFKPFGTITSAKVMVDDAGKSRGFGFVCFS 393
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+A A + PLY+ A
Sbjct: 394 TPEEATKAITEMNQRMVNGKPLYVALA 420
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
D ++IKNL+ ++ F G I S VA GQ S +GFV + T E+
Sbjct: 148 DGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVATD----DLGQ--SKCFGFVHYETAEA 201
Query: 640 LNQALKVLQNSSLDEHQIELKR--SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
A++ + L++ ++ + + S ++ ES+ +K +N I V+NI +
Sbjct: 202 AEAAIENVNGMLLNDREVYVGKHVSKKDRESKFEEMKANYTN--------IYVKNIDLEF 253
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ E E+LF +G++ + L K G +GFGFV + A A++AL
Sbjct: 254 SEKEFEDLFAPYGKITSIYLEKDQ--DGKSKGFGFVNYEEHKSAVEAVEAL 302
>gi|425434850|ref|ZP_18815314.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
gi|389675574|emb|CCH95321.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
Length = 97
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IFV NLSY +++DDL ++F+ YG + V +P+DKET + +GFA V +A + L
Sbjct: 3 IFVGNLSYEISQDDLVEVFQDYGKVQRVHIPVDKETGRKRGFAFVEMENKAQEAKAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR + + + +E +G
Sbjct: 63 DGADWMGRSIKVNEARDREERAPFNG 88
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 6/163 (3%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++ L++N +D +++ F+K G + S V ++ G S G+G+V F + E +
Sbjct: 403 LFVGGLSWNVDDDWLKKEFEKFGEVISARVITER-----GTERSKGFGYVDFASPEDARK 457
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + + +D I + S E + + + + N+PF A Q V
Sbjct: 458 AVEAMAGTEIDGRTINVDFSAPKPERPPQEKRSFGQEELSAPTTTLFIGNLPFSATQDSV 517
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
E F +G++ VRLP + +GFG+VEF T+ A A+
Sbjct: 518 YEAFSEYGDINSVRLPTDPETERI-KGFGYVEFATQEAATAAV 559
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV LS+ V +D L K FEK+G + + ++ T+++KGF V F PE A +A + +
Sbjct: 403 LFVGGLSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVEAM 462
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
GT GR +++ PK + + +F Q + + + NLP+
Sbjct: 463 AGTEIDGRTINVDFSAPKPERPPQEKR-----------SFGQEELSAPTTTLFIGNLPFS 511
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT------GLVEFLQKNQAKAAFN 501
+ F +GD+ V +P T G VEF + A AA N
Sbjct: 512 ATQDSVYEAFSEYGDINSVRLPTDPETERIKGFGYVEFATQEAATAAVN 560
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P TTL+I NL F++T+DS+ F + G I SV + P P G+G+V+F T+E
Sbjct: 499 PTTTLFIGNLPFSATQDSVYEAFSEYGDINSVRL-----PTDPETERIKGFGYVEFATQE 553
Query: 639 SLNQALKVLQNSS--LDEHQIELKRS 662
+ A+ V + +D+ Q L S
Sbjct: 554 AATAAVNVGRGDGIYIDQRQARLDYS 579
>gi|356514396|ref|XP_003525892.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 630
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 167/454 (36%), Gaps = 89/454 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L + V + L LF + + V + D T ++ G+ V F A +A L
Sbjct: 26 LYVGDLDHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNARDAAKAIDVL 85
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T G+ + ++ S RK A N + +KNL
Sbjct: 86 NFTPLNGKTIRIMYSIRDP-------------SARKSGAAN----------VFIKNL--- 119
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
D KALF+ F G +L K A
Sbjct: 120 DKAIDHKALFDTFSAFGNIL----------------SCKIA------------------- 144
Query: 519 PEGVFAEAKEKSKGKEKEKNE-EEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREP 577
+A +SKG + E EE + +K D Q V + + +
Sbjct: 145 -----TDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVYVGPFQRKQDRESALSG 199
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
+Y+KNL +TE ++ F + G I S V R D KS G+GFV F
Sbjct: 200 TKFNNVYVKNLFEATTEADLKSIFGEYGAITSAVVMRDVDGKS------KGFGFVNFANV 253
Query: 638 ESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNI 693
E +A++ L + D + + K+S R LE + + V K G+ + ++N+
Sbjct: 254 EDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKERNEQSTKETVDKYHGTNLYIKNL 313
Query: 694 PFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQ 750
E+ ELF FG + K +R P SG+ RG GFV F A A+ +
Sbjct: 314 DDSVGDEELRELFSEFGTITSCKVMRDP-----SGISRGSGFVAFSIAEGASWALGEM-N 367
Query: 751 STHLYGRRLVLEWAEEADNVEDIRKRTNRYFGTA 784
+ G+ L + A+ ED R R F A
Sbjct: 368 GKMVAGKPLYVALAQRK---EDRRARLQAQFSQA 398
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 147/388 (37%), Gaps = 90/388 (23%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG Y+ F + ++ KA++ N + GK + I +D SA+ SGAA+
Sbjct: 65 LGYGYVNFSNARDAAKAIDVLNFTPLNGKTIRIMYSIRDPSARKSGAAN----------- 113
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
+F++NL + L F +G + + D + +
Sbjct: 114 ----------------------VFIKNLDKAIDHKALFDTFSAFGNILSCKIATDA-SGQ 150
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KG V F E A A L+G + + +++ P + K++ +S K
Sbjct: 151 SKGHGFVQFESEESAQNAIDKLNGMLINDKQVYVGPFQRKQDR-------ESALSGTK-- 201
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQA 496
FN V VKNL T DLK++F +G IT V +
Sbjct: 202 -FNNV---------YVKNLFEATTEADLKSIFGEYG----------AITSAVVMRDVDGK 241
Query: 497 KAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEE 556
F + + ++ +E A G + KE GK ++K+E E E E ++
Sbjct: 242 SKGFGFVNFANVEDAAKAVE-ALNGKNFDGKEWYVGKAQKKSERELELKERNEQSTKETV 300
Query: 557 DNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK 616
D G T LYIKNL+ + ++ +R F + G I S V R
Sbjct: 301 DKYHG-------------------TNLYIKNLDDSVGDEELRELFSEFGTITSCKVMR-- 339
Query: 617 DPKSPGQFLSMGYGFVQFYTRESLNQAL 644
DP +S G GFV F E + AL
Sbjct: 340 DPSG----ISRGSGFVAFSIAEGASWAL 363
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 80/188 (42%), Gaps = 20/188 (10%)
Query: 562 VPEVEENVEEDEEREPEPDT-TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKS 620
+P+ N P T +LY+ +L+ + + + F + + SV + R +
Sbjct: 4 IPQTPTNDAAASGANPSMTTISLYVGDLDHDVNDPQLYDLFNQVAQVVSVRICRDVATQQ 63
Query: 621 PGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNV 680
S+GYG+V F +A+ VL + L+ I + S R+ + RKS
Sbjct: 64 -----SLGYGYVNFSNARDAAKAIDVLNFTPLNGKTIRIMYSIRDPSA------RKSG-- 110
Query: 681 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 740
+ + ++N+ + + F AFG + ++ SG +G GFV+F ++
Sbjct: 111 ----AANVFIKNLDKAIDHKALFDTFSAFGNILSCKIATD--ASGQSKGHGFVQFESEES 164
Query: 741 AKRAMKAL 748
A+ A+ L
Sbjct: 165 AQNAIDKL 172
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 223 QYHTIVVKNLPAGVKKKDLKAYF-------KPLPLASVRTTFLGMAYIGFKDEKNCNKAL 275
+++ + VKNL + DLK+ F + + V G ++ F + ++ KA+
Sbjct: 201 KFNNVYVKNLFEATTEADLKSIFGEYGAITSAVVMRDVDGKSKGFGFVNFANVEDAAKAV 260
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
GK D Y G A + +E +K ++ +S +++V D
Sbjct: 261 EA----LNGKNF-------DGKEWYVGKAQKKSERELE-LKERNEQSTKETV----DKYH 304
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
++++NL +V +++L +LF ++G + + D + ++G V F + E A+ A
Sbjct: 305 GTNLYIKNLDDSVGDEELRELFSEFGTITSCKVMRDP-SGISRGSGFVAFSIAEGASWAL 363
Query: 396 QHLDGTVFLGRMLHLIPGKPKEN 418
++G + G+ L++ + KE+
Sbjct: 364 GEMNGKMVAGKPLYVALAQRKED 386
>gi|126644829|ref|XP_001388131.1| cutinase negative acting protein [Cryptosporidium parvum Iowa II]
gi|126117359|gb|EAZ51459.1| cutinase negative acting protein, putative [Cryptosporidium parvum
Iowa II]
Length = 711
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 31/209 (14%)
Query: 556 EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARK 615
+DN Q P +N + RE +Y NL ++ TE+ IR F++CG I V+V
Sbjct: 490 DDNSQ--PRKRQNTNNKDSRE------VYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD 541
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR 675
K G F+ F E A++ Q E++ + R N + + +
Sbjct: 542 K-----------GCAFITFEQEEGAKSAIQWNQT----EYKGRMLRINMSADKP-----Q 581
Query: 676 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
S + G ++VRNIPF + V+ F G +K V +P + +G RGF VEF
Sbjct: 582 PGSLSSGGYGPSVIVRNIPFSSDDESVKSFFNGCGVVKRVSIP-RYSDTGKMRGFAMVEF 640
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+ + A+K T + GR + +E A
Sbjct: 641 ENDEQIQNALK--LSGTSMNGREVTIEIA 667
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 32/172 (18%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
+S ++ NL Y+ TE+++ LFE+ G + V + D KG A +TF E A A
Sbjct: 505 DSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD------KGCAFITFEQEEGAKSA 558
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKN 454
Q + T + GRML + K G++ + ++V+N
Sbjct: 559 IQ-WNQTEYKGRMLRINMSADKPQPGSLSSGGYGP-------------------SVIVRN 598
Query: 455 LPYRTLPTDLKALFEPFGDLGRVLVPPYGITG------LVEFLQKNQAKAAF 500
+P+ + +K+ F G + RV +P Y TG +VEF Q + A
Sbjct: 599 IPFSSDDESVKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNAL 650
>gi|444726902|gb|ELW67417.1| RNA-binding protein 28 [Tupaia chinensis]
Length = 733
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+TL++ L +++ + F + GP+ V +K G + G+G+V F RE +
Sbjct: 4 STLFVGRLPPSASSKQLEELFSQVGPVKQCFVVTEK-----GSKVCRGFGYVTFSMREDV 58
Query: 641 NQALK---VLQNSSLD--------EHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
+A+K + +D H+ + K N N E K K + A + ++++
Sbjct: 59 QRAIKEVTTFEGCKIDVTVAKKKLRHKTKEKGKNENSEFPKKEPKPKKAKAADKK-ARLI 117
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
+RN+ F+ + +++ LF FG + V +P+K G RGF FV+F EA +A+K +
Sbjct: 118 IRNLSFKCSEDDLKTLFTQFGTVLEVNIPRKP--DGKMRGFAFVQFKNLLEAGKALKGM- 174
Query: 750 QSTHLYGRRLVLEWAEEADNVEDIR 774
+ GR + ++WA D +D +
Sbjct: 175 NMKEIKGRMVAVDWAVAKDKYKDTQ 199
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 338 RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQH 397
R+ +RNLS+ +EDDL LF ++G + EV +P K K +GFA V F A +A +
Sbjct: 115 RLIIRNLSFKCSEDDLKTLFTQFGTVLEVNIP-RKPDGKMRGFAFVQFKNLLEAGKALKG 173
Query: 398 LDGTVFLGRML 408
++ GRM+
Sbjct: 174 MNMKEIKGRMV 184
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D+ E +F+RNLS+ E+DL +L +++G L V + + +T+ +KG A F E A
Sbjct: 329 DVTEGKTVFIRNLSFDSEEEDLGELLQQFGNLKYVRIVLHPDTEHSKGCAFAQFTTQEAA 388
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH------RGFGFVEFITK 738
G + +RN+ F +++ ++ EL + FG LK+VR+ LH +G F +F T+
Sbjct: 333 GKTVFIRNLSFDSEEEDLGELLQQFGNLKYVRIV-------LHPDTEHSKGCAFAQFTTQ 385
Query: 739 NEAKRAMKALCQSTH-----LYGRRLVLEWAEEADNVEDIR-KRTNRYFGT 783
A++ + A + L GR+L ++ A D ++ K+ + GT
Sbjct: 386 EAAQKCLTAASPESEGGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKPTGT 436
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 169/435 (38%), Gaps = 94/435 (21%)
Query: 327 VQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
V A+ + ++ +L VTE L LF+ + V + D + ++ G+A + F
Sbjct: 39 VVVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFS 97
Query: 387 MPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARS 446
P A +A + L+ T R + ++ +S R +
Sbjct: 98 NPNDAYRAMEALNYTPLFDRPIRIM------------------LSNR-----DPSTRLSG 134
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKA 498
K I +KNL D KALFE F G +L + G V+F ++ A+A
Sbjct: 135 KGNIFIKNL---DASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQA 191
Query: 499 AFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDN 558
A + L + +++ G F +E+++
Sbjct: 192 AIDKLNGMLMNDKQVFV-----GHFIRRQERAR--------------------------- 219
Query: 559 QQGVPEVEENVEEDEEREPEPD-TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
+E P P T +Y+KNL ED +R+ F K G I+S V R +
Sbjct: 220 --------------DENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQS 265
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-- 675
S +GFV F E+ A++ + SL + + + R+ + E E ++
Sbjct: 266 GN------SRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFE 319
Query: 676 --KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
+ + K G+ + ++N+ +++E+F +G + ++ + G+ RGFGFV
Sbjct: 320 QERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKV--MLNPQGMSRGFGFV 377
Query: 734 EFITKNEAKRAMKAL 748
+ EA RA+ +
Sbjct: 378 AYSNPEEALRALSEM 392
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 127/302 (42%), Gaps = 42/302 (13%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQ 286
I +KNL A + D KA F+ + F +C A++ + K
Sbjct: 138 IFIKNLDASI---DNKALFE--------------TFSSFGTILSCKVAMDVT---GRSKG 177
Query: 287 LNIYKYSKDNSAKYSGAADDNNNASMENIK---AKHW-KSQEDSVQFAEDIAESGRIFVR 342
++ K+ SA+ AA D N + N K H+ + QE + ++V+
Sbjct: 178 YGFVQFEKEESAQ---AAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVK 234
Query: 343 NLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTV 402
NL + ED+L K F K+G ++ ++ D ++ ++ F V F E A A + ++G
Sbjct: 235 NLPKEIGEDELRKTFGKFGVISSAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKMNGIS 293
Query: 403 FLGRMLHLIPGKPK-ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLP 461
+L++ + K E E + K + +++ F + A + +KNL
Sbjct: 294 LGDDVLYVGRAQKKSEREEELRRK----FEQERINRFEKSQGAN----LYLKNLDDSVDD 345
Query: 462 TDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLE 516
LK +F +G++ +V++ P G++ G V + +A A + + PLY+
Sbjct: 346 EKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIA 405
Query: 517 WA 518
A
Sbjct: 406 LA 407
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 141/399 (35%), Gaps = 110/399 (27%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG AYI F + + +A+ N + + + I ++D S + SG
Sbjct: 89 LGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSG-------------- 134
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
G IF++NL ++ L + F +G + + +D T +
Sbjct: 135 -------------------KGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGR 174
Query: 377 TKGFALVTFLMPEHATQAYQHLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCI 430
+KG+ V F E A A L+G VF+G H I + + + N
Sbjct: 175 SKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVG---HFIRRQERARDENTP------- 224
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGIT 485
+ R + + VKNLP +L+ F FG + +V
Sbjct: 225 TPRFTNVY-------------VKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCF 271
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG 545
G V F A +A + + LY+ G+ ++K+E E E
Sbjct: 272 GFVNFECTEAAASAVEKMNGISLGDDVLYV----------------GRAQKKSEREEELR 315
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
+ ++E + QG LY+KNL+ + ++ ++ F + G
Sbjct: 316 RKFEQERINRFEKSQG-------------------ANLYLKNLDDSVDDEKLKEMFSEYG 356
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ S V Q +S G+GFV + E +AL
Sbjct: 357 NVTSSKVMLNP------QGMSRGFGFVAYSNPEEALRAL 389
>gi|254414476|ref|ZP_05028242.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196178706|gb|EDX73704.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 96
Score = 69.7 bits (169), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I++ NLSY TEDDL +F YG + V+LP D+ET + +GFA V A L
Sbjct: 3 IYIGNLSYQATEDDLQTVFADYGTVKRVVLPTDRETGRVRGFAFVEMTDEAQEESAISQL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + +P++N
Sbjct: 63 DGAEWMGRQLRVNKARPRDN 82
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 13/182 (7%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL+ +L++ ++++ FK G I S V K+ S G+G+V F ES
Sbjct: 204 TLFAGSLSWGVDDNALYEAFKSFGNIVSARVVTDKN-----TGRSRGFGYVDFGDSESAT 258
Query: 642 QALKVLQNSSLDEHQIELKRSN------RNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+A + +Q +D + L +N + + A KR ++ ++ + + V N+PF
Sbjct: 259 KAYEAMQGQEIDGRALNLDYANAKPTEGKPQDRAADRAKRHGDTLSAESDT-LFVGNLPF 317
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
+Q V + F E+ VRLP SG +GFG+V F + +AK A+ A ++
Sbjct: 318 DTEQDTVRQFFSEVAEVASVRLPTDP-DSGNLKGFGYVTFNSIEDAKSALDAKNGASIGN 376
Query: 756 GR 757
GR
Sbjct: 377 GR 378
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F +LS+ V ++ L + F+ +G + + DK T +++GF V F E AT+AY+ +
Sbjct: 205 LFAGSLSWGVDDNALYEAFKSFGNIVSARVVTDKNTGRSRGFGYVDFGDSESATKAYEAM 264
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
G GR L+L K EG + ++R D + + + V NLP+
Sbjct: 265 QGQEIDGRALNLDYANAKPTEGKPQDRA-ADRAKRHGDTLSAESD-----TLFVGNLPFD 318
Query: 459 TLPTDLKALFEPFGDLGRVLVP 480
T ++ F ++ V +P
Sbjct: 319 TEQDTVRQFFSEVAEVASVRLP 340
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
AES +FV NL + +D + + F + +A V LP D ++ KGF VTF E A
Sbjct: 305 AESDTLFVGNLPFDTEQDTVRQFFSEVAEVASVRLPTDPDSGNLKGFGYVTFNSIEDAKS 364
Query: 394 AYQHLDG-TVFLGRMLHLI 411
A +G ++ GR +
Sbjct: 365 ALDAKNGASIGNGRNSRAV 383
>gi|154297435|ref|XP_001549144.1| hypothetical protein BC1G_12314 [Botryotinia fuckeliana B05.10]
Length = 794
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 33/211 (15%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+L++++L +T S+ F P+ TV P S GYGFV F E
Sbjct: 41 SLFVRSLPATATTASLTELFSDNYPLKHATVVL-----DPVTKQSKGYGFVTFADAEDAQ 95
Query: 642 QAL---------------KVLQNSSLD------EHQIELKRSNRNLESEATTVK--RKSS 678
+AL ++ Q S D + +++ + + +EA VK R+
Sbjct: 96 RALDEFNGQSFQGRKMKIEIAQPRSRDAPAKGGDDGLKMPKEKNAIATEAAAVKKARQEK 155
Query: 679 NVAKQTGSKILVRNIPFQAKQ-SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
+ K+++RN+P+ K E+ +LF FG++KF +PK G GFGF+
Sbjct: 156 LAESKAPPKLIIRNLPWSVKTPDELAKLFMGFGKVKFATMPKV---KGKEAGFGFIVMRG 212
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
K A++A+ A+ + GR+L ++WA E D
Sbjct: 213 KKNAEKALAAI-NGREIDGRQLAVDWAVEKD 242
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T T LT+LF PL + +D T ++KG+ VTF E A +A
Sbjct: 42 LFVRSLPATATTASLTELFSDNYPLKHATVVLDPVTKQSKGYGFVTFADAEDAQRALDEF 101
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAF------------NQVVEARS 446
+G F GR + + +P+ + G ++ +A ++ E+++
Sbjct: 102 NGQSFQGRKMKIEIAQPRSRDAPAKGGDDGLKMPKEKNAIATEAAAVKKARQEKLAESKA 161
Query: 447 KRIILVKNLPYRT-LPTDLKALFEPFGDLGRVLVPPY-GITGLVEFLQKNQAKAAFNSLA 504
++++NLP+ P +L LF FG + +P G F+ K A +LA
Sbjct: 162 PPKLIIRNLPWSVKTPDELAKLFMGFGKVKFATMPKVKGKEAGFGFIVMRGKKNAEKALA 221
Query: 505 YTKFKEV---PLYLEWAPE-GVFAEAKEKSKGKEKEKNEEEG 542
+E+ L ++WA E V+ EK+KNE+ G
Sbjct: 222 AINGREIDGRQLAVDWAVEKDVW----------EKKKNEDAG 253
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +F+RNL +T + L + FE++GP+ + +DK TD+ KG V F + A +
Sbjct: 350 STTLFIRNLPFTTLDATLKEHFEQFGPVRYARVVMDKATDRPKGTGFVCFYNVDDAESCF 409
Query: 396 QHL 398
++
Sbjct: 410 RNC 412
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
TTL+I+NL F + + +++ HF++ GP+ V K P G GFV FY
Sbjct: 351 TTLFIRNLPFTTLDATLKEHFEQFGPVRYARVVMDKATDRP-----KGTGFVCFY 400
>gi|428208904|ref|YP_007093257.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428010825|gb|AFY89388.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 103
Score = 69.7 bits (169), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 51/83 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT++DLTK+F YG + V LPID+E+ + +GF V + A L
Sbjct: 3 IYVGNLSYDVTQEDLTKVFADYGTVTRVQLPIDRESGRPRGFGFVEMETEDAEEAAISEL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG ++GR+L + KP+E G+
Sbjct: 63 DGARWMGRVLKVNKAKPREEGGS 85
Score = 39.3 bits (90), Expect = 8.4, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 27 YKITQEQLKAKFEEKGTVTDVQLKYTTE-GKFRRFAFIGYHREDQAQAALDYFNNTYVFS 85
Y +TQE L F + GTVT VQL E G+ R F F+ ED +AA+ +
Sbjct: 10 YDVTQEDLTKVFADYGTVTRVQLPIDRESGRPRGFGFVEMETEDAEEAAISELDGARWMG 69
Query: 86 SRIKVEK 92
+KV K
Sbjct: 70 RVLKVNK 76
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 169/435 (38%), Gaps = 94/435 (21%)
Query: 327 VQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
V A+ + ++ +L VTE L LF+ + V + D + ++ G+A + F
Sbjct: 39 VVVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFS 97
Query: 387 MPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARS 446
P A +A + L+ T R + ++ +S R +
Sbjct: 98 NPNDAYRAMEALNYTPLFDRPIRIM------------------LSNR-----DPSTRLSG 134
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKA 498
K I +KNL D KALFE F G +L + G V+F ++ A+A
Sbjct: 135 KGNIFIKNL---DASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQA 191
Query: 499 AFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDN 558
A + L + +++ G F +E+++
Sbjct: 192 AIDKLNGMLMNDKQVFV-----GHFIRRQERAR--------------------------- 219
Query: 559 QQGVPEVEENVEEDEEREPEPD-TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
+E P P T +Y+KNL ED +R+ F K G I+S V R +
Sbjct: 220 --------------DENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQS 265
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-- 675
S +GFV F E+ A++ + SL + + + R+ + E E ++
Sbjct: 266 GN------SRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFE 319
Query: 676 --KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
+ + K G+ + ++N+ +++E+F +G + ++ + G+ RGFGFV
Sbjct: 320 QERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKV--MLNPQGMSRGFGFV 377
Query: 734 EFITKNEAKRAMKAL 748
+ EA RA+ +
Sbjct: 378 AYSNPEEALRALSEM 392
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 127/302 (42%), Gaps = 42/302 (13%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQ 286
I +KNL A + D KA F+ + F +C A++ + K
Sbjct: 138 IFIKNLDASI---DNKALFE--------------TFSSFGTILSCKVAMDVT---GRSKG 177
Query: 287 LNIYKYSKDNSAKYSGAADDNNNASMENIK---AKHW-KSQEDSVQFAEDIAESGRIFVR 342
++ K+ SA+ AA D N + N K H+ + QE + ++V+
Sbjct: 178 YGFVQFEKEESAQ---AAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVK 234
Query: 343 NLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTV 402
NL + ED+L K F K+G ++ ++ D ++ ++ F V F E A A + ++G
Sbjct: 235 NLPKEIGEDELRKTFGKFGVISSAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKMNGIS 293
Query: 403 FLGRMLHLIPGKPK-ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLP 461
+L++ + K E E + K + +++ F + A + +KNL
Sbjct: 294 LGDDVLYVGRAQKKSEREEELRRK----FEQERINRFEKSQGAN----LYLKNLDDSVDD 345
Query: 462 TDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLE 516
LK +F +G++ +V++ P G++ G V + +A A + + PLY+
Sbjct: 346 EKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIA 405
Query: 517 WA 518
A
Sbjct: 406 LA 407
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 139/399 (34%), Gaps = 110/399 (27%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG AYI F + + +A+ N + + + I ++D S + SG
Sbjct: 89 LGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSG-------------- 134
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
G IF++NL ++ L + F +G + + +D T +
Sbjct: 135 -------------------KGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGR 174
Query: 377 TKGFALVTFLMPEHATQAYQHLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCI 430
+KG+ V F E A A L+G VF+G H I
Sbjct: 175 SKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVG---HFI------------------- 212
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGIT 485
R+ A ++ + VKNLP +L+ F FG + +V
Sbjct: 213 -RRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCF 271
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG 545
G V F A +A + + LY+ G+ ++K+E E E
Sbjct: 272 GFVNFECTEAAASAVEKMNGISLGDDVLYV----------------GRAQKKSEREEELR 315
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
+ ++E + QG LY+KNL+ + ++ ++ F + G
Sbjct: 316 RKFEQERINRFEKSQG-------------------ANLYLKNLDDSVDDEKLKEMFSEYG 356
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ S V Q +S G+GFV + E +AL
Sbjct: 357 NVTSSKVMLNP------QGMSRGFGFVAYSNPEEALRAL 389
>gi|347841454|emb|CCD56026.1| hypothetical protein [Botryotinia fuckeliana]
Length = 794
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 33/211 (15%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
+L++++L +T S+ F P+ TV P S GYGFV F E
Sbjct: 41 SLFVRSLPATATTASLTELFSDNYPLKHATVVL-----DPVTKQSKGYGFVTFADAEDAQ 95
Query: 642 QAL---------------KVLQNSSLD------EHQIELKRSNRNLESEATTVK--RKSS 678
+AL ++ Q S D + +++ + + +EA VK R+
Sbjct: 96 RALDEFNGQSFQGRKMKIEIAQPRSRDAPAKGGDDGLKMPKEKNAIATEAAAVKKARQEK 155
Query: 679 NVAKQTGSKILVRNIPFQAKQ-SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
+ K+++RN+P+ K E+ +LF FG++KF +PK G GFGF+
Sbjct: 156 LAESKAPPKLIIRNLPWSVKTPDELAKLFMGFGKVKFATMPKV---KGKEAGFGFIVMRG 212
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
K A++A+ A+ + GR+L ++WA E D
Sbjct: 213 KKNAEKALAAI-NGREIDGRQLAVDWAVEKD 242
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T T LT+LF PL + +D T ++KG+ VTF E A +A
Sbjct: 42 LFVRSLPATATTASLTELFSDNYPLKHATVVLDPVTKQSKGYGFVTFADAEDAQRALDEF 101
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAF----NQVVEARSKRI----- 449
+G F GR + + +P+ + G ++ +A V +AR +++
Sbjct: 102 NGQSFQGRKMKIEIAQPRSRDAPAKGGDDGLKMPKEKNAIATEAAAVKKARQEKLAESKA 161
Query: 450 ---ILVKNLPYRT-LPTDLKALFEPFGDLGRVLVPPY-GITGLVEFLQKNQAKAAFNSLA 504
++++NLP+ P +L LF FG + +P G F+ K A +LA
Sbjct: 162 PPKLIIRNLPWSVKTPDELAKLFMGFGKVKFATMPKVKGKEAGFGFIVMRGKKNAEKALA 221
Query: 505 YTKFKEV---PLYLEWAPE-GVFAEAKEKSKGKEKEKNEEEG 542
+E+ L ++WA E V+ EK+KNE+ G
Sbjct: 222 AINGREIDGRQLAVDWAVEKDVW----------EKKKNEDAG 253
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +F+RNL +T + L + FE++GP+ + +DK TD+ KG V F + A +
Sbjct: 350 STTLFIRNLPFTTLDATLKEHFEQFGPVRYARVVMDKATDRPKGTGFVCFYNVDDAESCF 409
Query: 396 QHL 398
++
Sbjct: 410 RNC 412
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
TTL+I+NL F + + +++ HF++ GP+ V K P G GFV FY
Sbjct: 351 TTLFIRNLPFTTLDATLKEHFEQFGPVRYARVVMDKATDRP-----KGTGFVCFY 400
>gi|220906552|ref|YP_002481863.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219863163|gb|ACL43502.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 101
Score = 69.7 bits (169), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I++ NLSYTVT+DDL ++F +YG + V LP D+ET + +GFA V A L
Sbjct: 3 IYIGNLSYTVTQDDLIQVFGEYGTVKSVHLPTDRETGRMRGFAFVEMENNNEEEAAIDAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR L + KP+E+ G
Sbjct: 63 DGAEWMGRDLKVNKAKPREDRSASRG 88
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 9/184 (4%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++ N+++N ED +RR F+ G I V ++ + G+G+V+F +
Sbjct: 223 LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGR-----AKGFGYVEFANAADAAK 277
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT--GSKILVRNIPFQAKQS 700
A K + LD Q+ + S + +A R + K++ + + + N+ F+
Sbjct: 278 AQKEMHEYELDGRQLNVDFSTPRAKPDANGGARANKYGDKRSPPSNTLFLGNVSFECSNE 337
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
++E+F +G + V LP +G +GFG+V+F ++ EA A++AL + GR +
Sbjct: 338 SIQEVFAEYGSITRVSLPTDR-DTGALKGFGYVDFSSQQEATAALEAL-NGQDIGGRAIR 395
Query: 761 LEWA 764
+++A
Sbjct: 396 IDYA 399
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +F+ N+S+ + + + ++F +YG + V LP D++T KGF V F + AT A
Sbjct: 322 SNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAAL 381
Query: 396 QHLDGTVFLGRMLHLIPGKPKEN 418
+ L+G GR + + P+E+
Sbjct: 382 EALNGQDIGGRAIRIDYATPRED 404
>gi|19173378|ref|NP_597181.1| POLYADENYLATE BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1]
gi|449328776|gb|AGE95052.1| polyadenylate binding protein 2 [Encephalitozoon cuniculi]
Length = 432
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 674 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
KR + Q +K+L+RN+PFQA + E+ ++F +F + VR+P K GS RGF FV
Sbjct: 343 KRPPEEASGQLMNKLLIRNVPFQASKEEIRKIFGSFHVVD-VRIPVKREGSS--RGFCFV 399
Query: 734 EFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+ ++ A++ STHLYGRRLVLE A
Sbjct: 400 TLNSPDDVTAAIEHFGSSTHLYGRRLVLERA 430
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E+++ +F G +TDV + +GKFRR F+GY E A+ Y + + + RI
Sbjct: 32 TKEEIEKEFSRHGKITDVFMARNEQGKFRRICFVGYMEEKDGVEAIRYRDGSLFKNQRIA 91
Query: 90 VE 91
E
Sbjct: 92 CE 93
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+ +KNL ++T++ I + F + G I V +AR + G+F + FV + + +
Sbjct: 22 IVVKNLPASTTKEEIEKEFSRHGKITDVFMARNEQ----GKFRRIC--FVGYMEEKDGVE 75
Query: 643 ALKVLQNSSLDEHQI---ELKRSNRNL-ESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
A++ S +I E++ + + ESE +K KI +RN+P +A
Sbjct: 76 AIRYRDGSLFKNQRIACEEVREGSPEIGESEERMIK---------YSRKIFIRNVPAEAN 126
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 730
+ V ++FK +GE++ V L + G G + F
Sbjct: 127 EQFVRDVFKEYGEIEEVGLLDRREGKGAYVKF 158
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 141/348 (40%), Gaps = 95/348 (27%)
Query: 227 IVVKNLPAGVKKKDLKAYF----KPLPLASVRT---TFLGMAYIGFKDEKNCNKALN-KN 278
IVVKNLPA K++++ F K + R F + ++G+ +EK+ +A+ ++
Sbjct: 22 IVVKNLPASTTKEEIEKEFSRHGKITDVFMARNEQGKFRRICFVGYMEEKDGVEAIRYRD 81
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
S +K +++ A ++ S E +S+E +++ S +
Sbjct: 82 GSLFKNQRI---------------ACEEVREGSPEI-----GESEERMIKY------SRK 115
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IF+RN+ E + +F++YG + EV L +D+ K A V F E A +AY+ +
Sbjct: 116 IFIRNVPAEANEQFVRDVFKEYGEIEEVGL-LDRREGKG---AYVKFSRGECALEAYRKV 171
Query: 399 DGTVFLGRM-LHLIPGKPKENEGNVDG-----------KVHCCISER-----KLDAFNQV 441
F+G + + P K + + + C SER +D ++
Sbjct: 172 Q---FIGGVKARMCPWKDRAEKRQYEHYNTLFFSFESIVKRICESERVSIRDVVDVNDKD 228
Query: 442 VEARSKRI------------------------------ILVKNLPYRTLPTDLKALFEPF 471
+ AR RI ++V+N+ +L +
Sbjct: 229 LGARMARIETHLVQETKKFLESNGIYLDHLTGSVDRNMLIVRNM-------ELMKCLDLV 281
Query: 472 GDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAP 519
D ++ V P L++F ++ A+ + L+ + KE +Y E+AP
Sbjct: 282 DDRCKISVAPSKCLALLKFDKEEDARRCYRKLSLKRVKEHVVYCEYAP 329
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 90/183 (49%), Gaps = 7/183 (3%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T+++ L+++ ++ ++ F+ G + V ++ G S GYG+V F +E
Sbjct: 166 TIFVGRLSWSIDDEWLKNEFEHIGGVIGARVIYER-----GTDRSRGYGYVDFENKEYAE 220
Query: 642 QALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE 701
+A+K + +D +I S + +K +V + + + N+ F A +
Sbjct: 221 KAVKEMHGKEIDGREINCDMSTSKPAAGNNDRAKKFGDVPSEPSETLFLGNLSFNADRDN 280
Query: 702 VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
+ E+F FGE+ VR+P + +GFG+V++ +AK+A+ AL Q ++ R + L
Sbjct: 281 ISEMFSKFGEIVSVRIPTHPE-TEQPKGFGYVQYTNVEDAKKALDAL-QGEYIDNRPVRL 338
Query: 762 EWA 764
+++
Sbjct: 339 DFS 341
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F+ NLS+ D+++++F K+G + V +P ET++ KGF V + E A +A L
Sbjct: 267 LFLGNLSFNADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKKALDAL 326
Query: 399 DGTVFLGRMLHL---IPGKPKEN 418
G R + L P P+ N
Sbjct: 327 QGEYIDNRPVRLDFSTPRPPQNN 349
>gi|348671204|gb|EGZ11025.1| hypothetical protein PHYSODRAFT_304700 [Phytophthora sojae]
Length = 987
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 152/377 (40%), Gaps = 89/377 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ + L VT+ + K +K G + +V + T K+ +ALV F + A A L
Sbjct: 233 VLIFGLGADVTQKHVLKKAKKVGAVEKVERKEEARTGKS--YALVQFKTTKDAALAVAKL 290
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFN-----QVVEARSKRIILVK 453
D +F G +L V +++ K A Q EA R+I V+
Sbjct: 291 DHHIFKGSVLQ------------VKSAAKAVVADDKASAGKPGHPKQAAEAEGLRLI-VR 337
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLV-----------------------PPYGIT---GL 487
NL ++T DL+ LFE G L V V P G + G
Sbjct: 338 NLAFQTTDKDLEKLFEVHGPLFEVRVVRMPVEEDKKKSEEGADGESKAEPVLGRSRGFGF 397
Query: 488 VEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEE------ 541
V++ A+AA L TK K + +++A K+K E++K +EE
Sbjct: 398 VQYRDVADARAAVEKLNGTKLKGREMIVDFALS--------KNKYLEQQKKQEEEAIASA 449
Query: 542 --GEEGEEEKKENTAEEDNQQGVPEVEENVEED----------------------EEREP 577
E E++++ N+ +ED Q ++ V+ E+ E
Sbjct: 450 APEGEDEDDEEANSGDEDEDQLEMATDDEVDAASDASDDEDEAEEEEEESAPAPKEDTEA 509
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
+ D TL+I+NL+F ++ED +R F+ G + V K G LS G GFV+F +
Sbjct: 510 QRDRTLFIRNLSFQTSEDGLRAFFQTFGAVEYARVVYDK-----GSGLSKGVGFVRFKSA 564
Query: 638 ESLNQALKVLQNSSLDE 654
+ + LK + LD+
Sbjct: 565 DVAAEVLKRGEQPQLDD 581
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 261 AYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKH 319
A + FK K+ A+ K + +KG L + SA + ADD +A K H
Sbjct: 273 ALVQFKTTKDAALAVAKLDHHIFKGSVLQV------KSAAKAVVADDKASAG----KPGH 322
Query: 320 WKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAE---VILPIDKETDK 376
K Q AE AE R+ VRNL++ T+ DL KLFE +GPL E V +P++++ K
Sbjct: 323 PK------QAAE--AEGLRLIVRNLAFQTTDKDLEKLFEVHGPLFEVRVVRMPVEEDKKK 374
Query: 377 -----------------TKGFALVTFLMPEHATQAYQHLDGTVFLGRML 408
++GF V + A A + L+GT GR +
Sbjct: 375 SEEGADGESKAEPVLGRSRGFGFVQYRDVADARAAVEKLNGTKLKGREM 423
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK----TKGFALVTFLMPEHATQA 394
+FVRNL + VT+++L +F + GP+ ++ + DK K T+GFA V F + A A
Sbjct: 4 VFVRNLPFGVTQEELEHVFSEIGPVKKIDVIKDKGKRKSEMLTRGFAFVKFAVESDAAVA 63
Query: 395 YQHLDGTVFLGRML 408
+ L+ T F GR +
Sbjct: 64 VEKLNKTDFQGRKM 77
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK---KMVGSGLHRGFGFVEFITKNEAK 742
+ + VRN+PF Q E+E +F G +K + + K K L RGF FV+F +++A
Sbjct: 2 ASVFVRNLPFGVTQEELEHVFSEIGPVKKIDVIKDKGKRKSEMLTRGFAFVKFAVESDAA 61
Query: 743 RAMKALCQSTHLYGRRLVLEWAEE 766
A++ L + T GR++++++A E
Sbjct: 62 VAVEKLNK-TDFQGRKMLIDYAME 84
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
Q + +RN+ FQ + + F+ FG +++ R+ GSGL +G GFV F + + A
Sbjct: 510 QRDRTLFIRNLSFQTSEDGLRAFFQTFGAVEYARVVYDK-GSGLSKGVGFVRFKSADVAA 568
Query: 743 RAMK 746
+K
Sbjct: 569 EVLK 572
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 162/415 (39%), Gaps = 80/415 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L + VT+ L LF + G + V + D T ++ G+ V + P+ A +A L
Sbjct: 33 LYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVL 92
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ T + L ++ H S RK N I +KNL +
Sbjct: 93 NFTPLNNKPLRIM-------------YSHRDPSIRKSGMAN----------IFIKNLD-K 128
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
T+ D KAL + F G +L K A
Sbjct: 129 TI--DHKALHDTFSSFGNIL----------------SCKVA------------------- 151
Query: 519 PEGVFAEAKEKSKGKE-KEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREP 577
+A +SKG + + EE + +K D Q V E D
Sbjct: 152 -----TDASGQSKGYGFVQFDSEEAAQNAIDKLNGMLINDKQVYVGNFLRKQERDSALSN 206
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
+Y+KNL ++T++ ++ F++ G I S V R D K S +GFV F
Sbjct: 207 IKFNNIYVKNLAESTTDEDLKSIFEEHGAITSAVVMRDADGK------SKCFGFVNFENV 260
Query: 638 ESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNI 693
+ +A++ L D+ + + K+S R LE + ++ +V K + ++N+
Sbjct: 261 DDAAKAVEALNGKKFDDKEWYVGKAQKKSERELELKG-RFEQSLESVEKYQAVNLYIKNL 319
Query: 694 PFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+++ELF FG + ++ SG+ RG GFV F T EA RA+ L
Sbjct: 320 DDSVNDEKLKELFSDFGTITSCKVMHD--PSGISRGSGFVAFSTPEEASRALAEL 372
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L+FN T+ + F + G + SV V R + S+GYG+V + +
Sbjct: 31 TSLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRR-----SLGYGYVNYSNPQDA 85
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL VL + L+ + + S+R+ ++ K + I ++N+
Sbjct: 86 ARALDVLNFTPLNNKPLRIMYSHRD------------PSIRKSGMANIFIKNLDKTIDHK 133
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F +FG + ++ SG +G+GFV+F ++ A+ A+ L
Sbjct: 134 ALHDTFSSFGNILSCKVATD--ASGQSKGYGFVQFDSEEAAQNAIDKL 179
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 155/422 (36%), Gaps = 107/422 (25%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG Y+ + + ++ +AL+ N + K L I +D S + SG A+
Sbjct: 72 LGYGYVNYSNPQDAARALDVLNFTPLNNKPLRIMYSHRDPSIRKSGMAN----------- 120
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
IF++NL T+ L F +G + + D + +
Sbjct: 121 ----------------------IFIKNLDKTIDHKALHDTFSSFGNILSCKVATDA-SGQ 157
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVH--CCISERK 434
+KG+ V F E A A L+G + + +++ GN K +S K
Sbjct: 158 SKGYGFVQFDSEEAAQNAIDKLNGMLINDKQVYV---------GNFLRKQERDSALSNIK 208
Query: 435 LDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYG-----ITGLVE 489
FN I VKNL T DLK++FE G + +V G V
Sbjct: 209 ---FNN---------IYVKNLAESTTDEDLKSIFEEHGAITSAVVMRDADGKSKCFGFVN 256
Query: 490 FLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGE-EGEEE 548
F + A A +L KF + KE GK ++K+E E E +G E
Sbjct: 257 FENVDDAAKAVEALNGKKFDD----------------KEWYVGKAQKKSERELELKGRFE 300
Query: 549 KKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
+ + E+ Q V LYIKNL+ + ++ ++ F G I
Sbjct: 301 QSLESVEK--YQAV-------------------NLYIKNLDDSVNDEKLKELFSDFGTIT 339
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES 668
S V DP +S G GFV F T E ++AL L + + + + R E
Sbjct: 340 SCKVMH--DPSG----ISRGSGFVAFSTPEEASRALAELNGKMVVSKPLYVAPAQRKEER 393
Query: 669 EA 670
A
Sbjct: 394 RA 395
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 95/202 (47%), Gaps = 25/202 (12%)
Query: 223 QYHTIVVKNLPAGVKKKDLKAYFK---PLPLASVRTTFLG----MAYIGFKDEKNCNKAL 275
+++ I VKNL +DLK+ F+ + A V G ++ F++ + KA+
Sbjct: 208 KFNNIYVKNLAESTTDEDLKSIFEEHGAITSAVVMRDADGKSKCFGFVNFENVDDAAKAV 267
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
+ LN K+ D+ Y G A + +E +K + +S E ++ +
Sbjct: 268 ---------EALNGKKF--DDKEWYVGKAQKKSERELE-LKGRFEQSLESVEKY-----Q 310
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+ ++++NL +V ++ L +LF +G + + + + ++G V F PE A++A
Sbjct: 311 AVNLYIKNLDDSVNDEKLKELFSDFGTITSCKV-MHDPSGISRGSGFVAFSTPEEASRAL 369
Query: 396 QHLDGTVFLGRMLHLIPGKPKE 417
L+G + + + L++ P + KE
Sbjct: 370 AELNGKMVVSKPLYVAPAQRKE 391
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 169/435 (38%), Gaps = 94/435 (21%)
Query: 327 VQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
V A+ + ++ +L VTE L LF+ + V + D + ++ G+A + F
Sbjct: 39 VVVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFS 97
Query: 387 MPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARS 446
P A +A + L+ T R + ++ +S R +
Sbjct: 98 NPNDAYRAMEALNYTPLFDRPIRIM------------------LSNR-----DPSTRLSG 134
Query: 447 KRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKA 498
K I +KNL D KALFE F G +L + G V+F ++ A+A
Sbjct: 135 KGNIFIKNL---DASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQA 191
Query: 499 AFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDN 558
A + L + +++ G F +E+++
Sbjct: 192 AIDKLNGMLMNDKQVFV-----GHFIRRQERAR--------------------------- 219
Query: 559 QQGVPEVEENVEEDEEREPEPD-TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
+E P P T +Y+KNL ED +R+ F K G I+S V R +
Sbjct: 220 --------------DENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQS 265
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-- 675
S +GFV F E+ A++ + SL + + + R+ + E E ++
Sbjct: 266 GN------SRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFE 319
Query: 676 --KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 733
+ + K G+ + ++N+ +++E+F +G + ++ + G+ RGFGFV
Sbjct: 320 QERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKV--MLNPQGMSRGFGFV 377
Query: 734 EFITKNEAKRAMKAL 748
+ EA RA+ +
Sbjct: 378 AYSNPEEALRALSEM 392
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 127/302 (42%), Gaps = 42/302 (13%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQ 286
I +KNL A + D KA F+ + F +C A++ + K
Sbjct: 138 IFIKNLDASI---DNKALFE--------------TFSSFGTILSCKVAMDVT---GRSKG 177
Query: 287 LNIYKYSKDNSAKYSGAADDNNNASMENIK---AKHW-KSQEDSVQFAEDIAESGRIFVR 342
++ K+ SA+ AA D N + N K H+ + QE + ++V+
Sbjct: 178 YGFVQFEKEESAQ---AAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVK 234
Query: 343 NLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTV 402
NL + ED+L K F K+G ++ ++ D ++ ++ F V F E A A + ++G
Sbjct: 235 NLPKEIGEDELRKTFGKFGVISSAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKMNGIS 293
Query: 403 FLGRMLHLIPGKPK-ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLP 461
+L++ + K E E + K + +++ F + A + +KNL
Sbjct: 294 LGDDVLYVGRAQKKSEREEELRRK----FEQERINRFEKSQGAN----LYLKNLDDSVDD 345
Query: 462 TDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLE 516
LK +F +G++ +V++ P G++ G V + +A A + + PLY+
Sbjct: 346 EKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIA 405
Query: 517 WA 518
A
Sbjct: 406 LA 407
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 141/399 (35%), Gaps = 110/399 (27%)
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIK 316
LG AYI F + + +A+ N + + + I ++D S + SG
Sbjct: 89 LGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSG-------------- 134
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
G IF++NL ++ L + F +G + + +D T +
Sbjct: 135 -------------------KGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGR 174
Query: 377 TKGFALVTFLMPEHATQAYQHLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCI 430
+KG+ V F E A A L+G VF+G H I + + + N
Sbjct: 175 SKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVG---HFIRRQERARDENTP------- 224
Query: 431 SERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV-----PPYGIT 485
+ R + + VKNLP +L+ F FG + +V
Sbjct: 225 TPRFTNVY-------------VKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCF 271
Query: 486 GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEG 545
G V F A +A + + LY+ G+ ++K+E E E
Sbjct: 272 GFVNFECTEAAASAVEKMNGISLGDDVLYV----------------GRAQKKSEREEELR 315
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCG 605
+ ++E + QG LY+KNL+ + ++ ++ F + G
Sbjct: 316 RKFEQERINRFEKSQG-------------------ANLYLKNLDDSVDDEKLKEMFSEYG 356
Query: 606 PIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ S V Q +S G+GFV + E +AL
Sbjct: 357 NVTSSKVMLNP------QGMSRGFGFVAYSNPEEALRAL 389
>gi|291407988|ref|XP_002720199.1| PREDICTED: poly(A) binding protein, cytoplasmic 5 [Oryctolagus
cuniculus]
Length = 382
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 156/411 (37%), Gaps = 80/411 (19%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
V +L VTED L K F GPL + D T G+ V F P A A ++
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 401 TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTL 460
+ G+ L+ +P + RK N I +KNL
Sbjct: 82 DLINGKPFRLMWSQPDDRL-------------RKSGVGN----------IFIKNLDKSID 118
Query: 461 PTDLKALFEPFGDL--GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
L LF FG++ +V+ +G K A F+SLA W
Sbjct: 119 NRALFYLFSAFGNILSCKVVSDDHG--------SKGYAYVHFDSLAAAN------RAIWH 164
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
GV ++ G+ K PE E E R+
Sbjct: 165 MNGVRLNNRQVYVGRFK--------------------------FPE--ERAAEVRTRDRA 196
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +++KN + ++ ++ F + GP SV V R KS G+GFV++ T E
Sbjct: 197 TFTNVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDASGKSK------GFGFVRYETHE 250
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT----GSKILVRNIP 694
+ +A+ L S+D + + R+ + +E A +R K+ G I ++N+
Sbjct: 251 AAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLD 310
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+++E F +FG + ++ M+ G +GFG V F + EA +A+
Sbjct: 311 ESISDEKLKEEFSSFGSISRAKV---MMEVGHGKGFGVVCFSSFEEATKAV 358
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V S GY +V F + + N+
Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVSDDHG-------SKGYAYVHFDSLAAANR 160
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A+ + L+ Q+ + R + E A V+ + + T + + V+N ++
Sbjct: 161 AIWHMNGVRLNNRQVYVGRF-KFPEERAAEVRTRD----RATFTNVFVKNFGDDMDDEKL 215
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ELF +G + V++ + SG +GFGFV + T A++A+ L
Sbjct: 216 KELFSEYGPTESVKVIRD--ASGKSKGFGFVRYETHEAAQKAVLDL 259
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 26/175 (14%)
Query: 585 IKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ +L+ + TED + + F+ GP+ + R +SP +GYG+V F AL
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSP-----LGYGYVNFRFPADAEWAL 76
Query: 645 KVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ ++ L + S+ RKS I ++N+ +
Sbjct: 77 NTMNFDLINGKPFRL------MWSQPDDRLRKSGV------GNIFIKNLDKSIDNRALFY 124
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
LF AFG + ++ GS +G+ +V F + A RA+ H+ G RL
Sbjct: 125 LFSAFGNILSCKVVSDDHGS---KGYAYVHFDSLAAANRAI------WHMNGVRL 170
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D A +FV+N + ++ L +LF +YGP E + I + K+KGF V + E A
Sbjct: 194 DRATFTNVFVKNFGDDMDDEKLKELFSEYGP-TESVKVIRDASGKSKGFGFVRYETHEAA 252
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A L G G++L++
Sbjct: 253 QKAVLDLHGKSIDGKVLYV 271
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
I+++NL +++++ L + F +G + A+V++ E KGF +V F E AT+A
Sbjct: 304 IYIKNLDESISDEKLKEEFSSFGSISRAKVMM----EVGHGKGFGVVCFSSFEEATKAVD 359
Query: 397 HLDGTVFLGRMLHLIPGKPK 416
++G + + LH+ G+ +
Sbjct: 360 EMNGRIVGSKPLHVTLGQAR 379
>gi|434396627|ref|YP_007130631.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428267724|gb|AFZ33665.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 102
Score = 69.7 bits (169), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V N+ Y VT++DL+ +F +YG + V LP+D+ET + +GF V QA + L
Sbjct: 3 IYVGNIPYEVTQEDLSSIFAEYGTVTRVYLPVDRETGRMRGFGFVEMSNETEEDQAIETL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG ++GR L + +PKEN N
Sbjct: 63 DGAEWMGRELRVNKARPKENNNN 85
Score = 41.6 bits (96), Expect = 1.6, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V NIP++ Q ++ +F +G + V LP +G RGFGFVE + E +A++
Sbjct: 3 IYVGNIPYEVTQEDLSSIFAEYGTVTRVYLPVDR-ETGRMRGFGFVEMSNETEEDQAIET 61
Query: 748 LCQSTHLYGRRLVLEWAEEADN 769
L GR L + A +N
Sbjct: 62 L-DGAEWMGRELRVNKARPKEN 82
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 104/208 (50%), Gaps = 26/208 (12%)
Query: 571 EDEEREPEPD--------TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPG 622
EDEE E P T+++ L+++ ++ +++ F+ G + + V ++ G
Sbjct: 158 EDEEEESSPKKAKTDGEPATVFVGRLSWSIDDEWLKQEFEHIGGVVAARVMYER-----G 212
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTV------KRK 676
S GYG+V F + +A+K + +D I N ++ + TV +++
Sbjct: 213 TDRSRGYGYVDFEDKSYAEKAVKEMHGKEIDGRPI-----NVDMSTSKPTVNPREDRQKR 267
Query: 677 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 736
++ + + + N+ F A + + E+F FGE+ VR+P + +GFG+V++
Sbjct: 268 FGDIPSEPSDTLFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHPE-TEQPKGFGYVQYT 326
Query: 737 TKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+ ++AK+A++AL Q ++ R + L+++
Sbjct: 327 SIDDAKKALEAL-QGEYIDNRPVRLDYS 353
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
EP TL++ NL+FN+ D+I F K G I SV + P P G+G+VQ+ +
Sbjct: 274 EPSDTLFLGNLSFNADRDNIYEIFGKFGEIISVRI-----PTHPETEQPKGFGYVQYTSI 328
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSN 663
+ +AL+ LQ +D + L S
Sbjct: 329 DDAKKALEALQGEYIDNRPVRLDYST 354
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +F+ NLS+ D++ ++F K+G + V +P ET++ KGF V + + A +A
Sbjct: 276 SDTLFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTSIDDAKKAL 335
Query: 396 QHLDGTVFLGRMLHLIPGKPK 416
+ L G R + L PK
Sbjct: 336 EALQGEYIDNRPVRLDYSTPK 356
>gi|323510053|dbj|BAJ77920.1| cgd3_4150 [Cryptosporidium parvum]
Length = 747
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 31/209 (14%)
Query: 556 EDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARK 615
+DN Q P +N + RE +Y NL ++ TE+ IR F++CG I V+V
Sbjct: 526 DDNSQ--PRKRQNTNNKDSRE------VYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD 577
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR 675
K G F+ F E A++ Q E++ + R N + + +
Sbjct: 578 K-----------GCAFITFEQEEGAKSAIQWNQT----EYKGRMLRINMSADKP-----Q 617
Query: 676 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
S + G ++VRNIPF + V+ F G +K V +P + +G RGF VEF
Sbjct: 618 PGSLSSGGYGPSVIVRNIPFSSDDESVKSFFNGCGVVKRVSIP-RYSDTGKMRGFAMVEF 676
Query: 736 ITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+ + A+K T + GR + +E A
Sbjct: 677 ENDEQIQNALK--LSGTSMNGREVTIEIA 703
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 32/172 (18%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
+S ++ NL Y+ TE+++ LFE+ G + V + D KG A +TF E A A
Sbjct: 541 DSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD------KGCAFITFEQEEGAKSA 594
Query: 395 YQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKN 454
Q + T + GRML + K G++ + ++V+N
Sbjct: 595 IQ-WNQTEYKGRMLRINMSADKPQPGSLSSGGYGP-------------------SVIVRN 634
Query: 455 LPYRTLPTDLKALFEPFGDLGRVLVPPYGITG------LVEFLQKNQAKAAF 500
+P+ + +K+ F G + RV +P Y TG +VEF Q + A
Sbjct: 635 IPFSSDDESVKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNAL 686
>gi|194758473|ref|XP_001961486.1| GF14992 [Drosophila ananassae]
gi|190615183|gb|EDV30707.1| GF14992 [Drosophila ananassae]
Length = 660
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP+P T L + L ++D IR F G + S + R K GQ S+GYGFV +
Sbjct: 93 EPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRD---KVTGQ--SLGYGFVNYV 147
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
+E +A+ L L I++ ++ R SS K G+ + V +P
Sbjct: 148 KQEDAEKAINALNGLRLQNKTIKV------------SIARPSSESIK--GANLYVSGLPK 193
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFITKNEAKRAMKALCQS 751
QS++E LF +G++ R+ + GL +G GF+ F + EA RA+K L +
Sbjct: 194 NMTQSDLESLFSPYGKIITSRILCDNITDEHAQGLSKGVGFIRFDQRFEADRAIKELNGT 253
Query: 752 T 752
T
Sbjct: 254 T 254
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 330 AEDIAESGR-IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP 388
IA SG IFV NL+ E+ L +LF +G + V + D +++K KGF VT
Sbjct: 341 GNTIASSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNY 400
Query: 389 EHATQAYQHLDGTVFLGRMLHL 410
E A A Q L+G R+L L
Sbjct: 401 EEAVLAIQSLNGYTLGNRVLQL 422
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+++D++ LF +G + L DK T ++ G+ V ++ E A +A L
Sbjct: 100 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 159
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P S + N + V LP
Sbjct: 160 NGLRLQNKTIKVSIARP---------------SSESIKGAN----------LYVSGLPKN 194
Query: 459 TLPTDLKALFEPFGDL--GRVLV 479
+DL++LF P+G + R+L
Sbjct: 195 MTQSDLESLFSPYGKIITSRILC 217
>gi|350635107|gb|EHA23469.1| hypothetical protein ASPNIDRAFT_173997 [Aspergillus niger ATCC
1015]
Length = 235
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
L++ NL++N E ++ F+ G ++ V + ++D S G+G+V++
Sbjct: 1 ANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGR-----SRGFGYVEYTNAVDA 55
Query: 641 NQALKVLQNSSLDEHQIEL---------KRSNRNLESEATTVKRKSSNVAKQTGSKILVR 691
+A + + + +D I L K + A R + A + V
Sbjct: 56 AKAFEAKKGAEIDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQASPESDTLFVG 115
Query: 692 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQS 751
N+PF A + V ELF G + +RLP SG +GFG+V++ + +EA+ A L Q
Sbjct: 116 NLPFDANEDSVGELFGEKGSILGIRLPTDP-DSGRPKGFGYVQYSSVDEARAAFNEL-QG 173
Query: 752 THLYGRRLVLEWA 764
L GR + L+++
Sbjct: 174 ADLLGRPVRLDFS 186
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 18/191 (9%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV NLS+ V E L FE +G L+ V + +++T +++GF V + A +A++
Sbjct: 3 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 62
Query: 399 DGTVFLGRMLHL--IPGKP--KENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKN 454
G GR+++L G+P K+ +G + + + +F S + V N
Sbjct: 63 KGAEIDGRVINLDYATGRPANKDQQGGFKDRANA-----RARSFGDQASPESD-TLFVGN 116
Query: 455 LPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAYTK 507
LP+ + LF G + + +P P G G V++ ++A+AAFN L
Sbjct: 117 LPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGF-GYVQYSSVDEARAAFNELQGAD 175
Query: 508 FKEVPLYLEWA 518
P+ L+++
Sbjct: 176 LLGRPVRLDFS 186
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +FV NL + ED + +LF + G + + LP D ++ + KGF V + + A A
Sbjct: 108 ESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAA 167
Query: 395 YQHLDGTVFLGRMLHLIPGKPKEN 418
+ L G LGR + L P+ N
Sbjct: 168 FNELQGADLLGRPVRLDFSTPRAN 191
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
++ PE DT L++ NL F++ EDS+ F + G I + + D P G+G+V
Sbjct: 103 DQASPESDT-LFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRP-----KGFGYV 156
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIELKRS 662
Q+ + + A LQ + L + L S
Sbjct: 157 QYSSVDEARAAFNELQGADLLGRPVRLDFS 186
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 22/259 (8%)
Query: 518 APEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEE-----NVEED 572
AP KE+S + E EE E++E+ +Q+ E +E ++D
Sbjct: 198 APAKTKKAIKEESASDDSEDESGSDEESSSEEEEDEKPAKSQKRKAESDEVPVTKKAKKD 257
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
+ E L++ NL++N E+ +R F+ G ++ V + +D S G+G+V
Sbjct: 258 SD-ESNASANLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRD-----SGRSRGFGYV 311
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSK----- 687
+F E +A + + + LD + L + N A K +S AK G +
Sbjct: 312 EFTNAEDAAKAFEAKKGAELDGRPLNLDYA--NARQNAGGAKDRSQARAKSFGDQTSPES 369
Query: 688 --ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ + NI F A ++ ++E F ++G + +RLP SG +GFG+++F + +EA+ A+
Sbjct: 370 DTLFIGNISFGADENAIQETFSSYGTISGIRLPTDPE-SGRPKGFGYIQFSSVDEARSAL 428
Query: 746 KALCQSTHLYGRRLVLEWA 764
L Q + L GR + L+++
Sbjct: 429 NEL-QGSELAGRAMRLDFS 446
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSF-WKGKQLNI-YKYSKDNSAKYSGAADDNNNASMENIK 316
G Y+ F + ++ KA K G+ LN+ Y ++ N+ G A D + A +
Sbjct: 307 GFGYVEFTNAEDAAKAFEAKKGAELDGRPLNLDYANARQNA----GGAKDRSQA-----R 357
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
AK + Q ES +F+ N+S+ E+ + + F YG ++ + LP D E+ +
Sbjct: 358 AKSFGDQTSP--------ESDTLFIGNISFGADENAIQETFSSYGTISGIRLPTDPESGR 409
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
KGF + F + A A L G+ GR + L P++N
Sbjct: 410 PKGFGYIQFSSVDEARSALNELQGSELAGRAMRLDFSTPRQN 451
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 15/121 (12%)
Query: 670 ATTVKRKSSN----VAKQ---------TGSKILVRNIPFQAKQSEVEELFKAFGELKFVR 716
A + KRK+ + V K+ + + V N+ + + + F++FGEL VR
Sbjct: 236 AKSQKRKAESDEVPVTKKAKKDSDESNASANLFVGNLSWNVDEEWLRSEFESFGELSGVR 295
Query: 717 LPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKR 776
+ SG RGFG+VEF +A +A +A + L GR L L++A N + R
Sbjct: 296 IVTDR-DSGRSRGFGYVEFTNAEDAAKAFEA-KKGAELDGRPLNLDYANARQNAGGAKDR 353
Query: 777 T 777
+
Sbjct: 354 S 354
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPG 622
P V N+ E D T Y+ NL+ TE+ + F + GP+ +V V PK
Sbjct: 7 PGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYV-----PKDRV 61
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK 682
L GYGFV+F + E + A+KVL L I + +++++ +KS +V
Sbjct: 62 TNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD---------KKSLDV-- 110
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM--VGSGLHRGFGFVEFITKNE 740
G+ + V N+ + + + F AFG + V PK M +G RGFGFV + +
Sbjct: 111 --GANLFVGNLDPDVDEKLLYDTFSAFGVI--VTNPKIMRDPDTGNSRGFGFVSYDSFEA 166
Query: 741 AKRAMKALCQSTHLYGRRLVLEWAEEAD 768
+ A++A+ +L R++ + +A + D
Sbjct: 167 SDAAIEAM-NGQYLCNRQITVSYAYKKD 193
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 340 FVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLD 399
+V NL VTE+ L +LF + GP+ V +P D+ T+ +G+ V F E A A + L+
Sbjct: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Query: 400 GTVFLGRMLHL 410
G+ + +
Sbjct: 88 MIKLYGKPIRV 98
>gi|254424446|ref|ZP_05038164.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196191935|gb|EDX86899.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 84
Score = 69.3 bits (168), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NLSY VT+DDL +F +YG + V LP D+ET + +GFA V E A + L
Sbjct: 3 VYVGNLSYDVTQDDLNSVFGEYGTVKRVTLPTDRETGRVRGFAFVDLSSDEEEQAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG ++GR L + KP+E
Sbjct: 63 DGAEWMGRDLRVNKAKPRE 81
>gi|115396600|ref|XP_001213939.1| predicted protein [Aspergillus terreus NIH2624]
gi|114193508|gb|EAU35208.1| predicted protein [Aspergillus terreus NIH2624]
Length = 282
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 17/190 (8%)
Query: 576 EPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFY 635
EP P T+Y+ NL ++ T + +R+ +K G + V + + +S G+G+VQF
Sbjct: 94 EPTPKETVYVGNLFYDVTAEDLRKQMEKYGVVEQVFITFDN------RGISRGFGYVQFD 147
Query: 636 TRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPF 695
T ES +A+ + + ++ ++ + N+ + +S A +T + + N+ F
Sbjct: 148 TIESAKRAISAMHMRVFEGRRVVVQYAQNNVAPQ------RSMRPATRT---LYIGNLSF 198
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLY 755
+ ++ ELF+ + VR+ +GL RGF EFI A+ + L + T Y
Sbjct: 199 ETTDRDLNELFRDVVNVIDVRVSVDR-RTGLFRGFAHAEFINVESARIGYEILSRKTP-Y 256
Query: 756 GRRLVLEWAE 765
GR+L ++++E
Sbjct: 257 GRKLRIDYSE 266
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 69/176 (39%), Gaps = 35/176 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NL Y VT +DL K EKYG + +V + D ++GF V F E A +A +
Sbjct: 101 VYVGNLFYDVTAEDLRKQMEKYGVVEQVFITFDNR-GISRGFGYVQFDTIESAKRAISAM 159
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARS----KRIILVKN 454
VF GR + + A N V RS R + + N
Sbjct: 160 HMRVFEGRRVVV------------------------QYAQNNVAPQRSMRPATRTLYIGN 195
Query: 455 LPYRTLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAFNSLA 504
L + T DL LF ++ V V TGL EF+ A+ + L+
Sbjct: 196 LSFETTDRDLNELFRDVVNVIDVRVSVDRRTGLFRGFAHAEFINVESARIGYEILS 251
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 306 DNNNASMENIKAKHWKSQEDS---VQFAEDIAESGR--------IFVRNLSYTVTEDDLT 354
D ++ I A H + E VQ+A++ R +++ NLS+ T+ DL
Sbjct: 147 DTIESAKRAISAMHMRVFEGRRVVVQYAQNNVAPQRSMRPATRTLYIGNLSFETTDRDLN 206
Query: 355 KLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
+LF + +V + +D+ T +GFA F+ E A Y+ L GR L +
Sbjct: 207 ELFRDVVNVIDVRVSVDRRTGLFRGFAHAEFINVESARIGYEILSRKTPYGRKLRI 262
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
EE+ + E T +Y+KN +T++ + F + GP++SV + KS G+
Sbjct: 188 EEERRAKMEQFTNVYVKNFADGTTDEYLLEIFSQYGPLSSVKIMTDDSGKS------KGF 241
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTG 685
GF++F +A++ + +I + R+ + E E ++ K + +AK G
Sbjct: 242 GFIRFECHADAKRAIEEVNGKQFGGRKIYVSRAQKKKEREEELQQKLEEIKQNRIAKYHG 301
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ V+N+ A+ ++ E L K F V K +V G +GFGFV F ++ EAK+A+
Sbjct: 302 MSLFVKNL---AESTDDEHLRKIFAPFGTVTSAKVIVKGGRRKGFGFVSFSSREEAKKAV 358
Query: 746 KALCQSTHLYGRRLVLEWA 764
+ + L R L + +A
Sbjct: 359 EEM-HGKMLSARPLYVSYA 376
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+N + T++ L ++F +YGPL+ V + D ++ K+KGF + F A +A + +
Sbjct: 201 VYVKNFADGTTDEYLLEIFSQYGPLSSVKIMTD-DSGKSKGFGFIRFECHADAKRAIEEV 259
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G F GR +++ + K+ + I + ++ ++ + + VKNL
Sbjct: 260 NGKQFGGRKIYVSRAQKKKEREEELQQKLEEIKQNRIAKYHGMS-------LFVKNLAES 312
Query: 459 TLPTDLKALFEPFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKEVPLY 514
T L+ +F PFG + V G G V F + +AK A + PLY
Sbjct: 313 TDDEHLRKIFAPFGTVTSAKVIVKGGRRKGFGFVSFSSREEAKKAVEEMHGKMLSARPLY 372
Query: 515 LEWA 518
+ +A
Sbjct: 373 VSYA 376
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ TE + F GPI SV V R S+GYG+V F+ E
Sbjct: 17 PSASLYVGDLHPEVTEAMLYEKFSAAGPILSVRVCRDALSSR-----SLGYGYVNFHRPE 71
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
AL + L + + +R+ + V + V ++
Sbjct: 72 DAGHALNTMNFDVLHGKPVRIMWCHRDPSLRRSGV------------GNVFVNHLDASID 119
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
E+ +LF FG + ++ G +G GFV F T+ A +A+K +
Sbjct: 120 NKELYDLFAGFGTILSCKVVSDENGP---KGHGFVHFETREAADKAIKEM 166
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 15/142 (10%)
Query: 628 GYGFVQFYTRESLNQALKVLQNSSLDEHQI---ELKRSNRNLESEATTVKRKSSNVAKQT 684
G+GFV F TRE+ ++A+K + S + E ++ + KR N+ E +++ ++
Sbjct: 147 GHGFVHFETREAADKAIKEMNGSLVKERKVFVGQFKRPNQREEERRAKMEQFTN------ 200
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRA 744
+ V+N + E+F +G L V++ SG +GFGF+ F +AKRA
Sbjct: 201 ---VYVKNFADGTTDEYLLEIFSQYGPLSSVKI--MTDDSGKSKGFGFIRFECHADAKRA 255
Query: 745 MKALCQSTHLYGRRLVLEWAEE 766
++ + GR++ + A++
Sbjct: 256 IEEV-NGKQFGGRKIYVSRAQK 276
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 158/443 (35%), Gaps = 123/443 (27%)
Query: 249 PLASVRTT-------FLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKY 300
P+ SVR LG Y+ F ++ ALN N GK + I +D S +
Sbjct: 44 PILSVRVCRDALSSRSLGYGYVNFHRPEDAGHALNTMNFDVLHGKPVRIMWCHRDPSLRR 103
Query: 301 SGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
SG G +FV +L ++ +L LF +
Sbjct: 104 SGV---------------------------------GNVFVNHLDASIDNKELYDLFAGF 130
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGT------VFLGRMLHLIPGK 414
G + + D+ K GF V F E A +A + ++G+ VF+G+ +
Sbjct: 131 GTILSCKVVSDENGPKGHGF--VHFETREAADKAIKEMNGSLVKERKVFVGQF-----KR 183
Query: 415 PKENEGNVDGKVHCCISER--KLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFG 472
P + E ER K++ F V VKN T L +F +G
Sbjct: 184 PNQRE-----------EERRAKMEQFTNV---------YVKNFADGTTDEYLLEIFSQYG 223
Query: 473 DLG--RVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAK 527
L +++ G + G + F AK A + +F +Y+ A
Sbjct: 224 PLSSVKIMTDDSGKSKGFGFIRFECHADAKRAIEEVNGKQFGGRKIYVSRA--------- 274
Query: 528 EKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKN 587
K+KE+ EE ++ EE K+ A+ +L++KN
Sbjct: 275 ----QKKKEREEELQQKLEEIKQNRIAKYHGM----------------------SLFVKN 308
Query: 588 LNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVL 647
L ++ ++ +R+ F G + S V K + G+GFV F +RE +A++ +
Sbjct: 309 LAESTDDEHLRKIFAPFGTVTSAKVIVKGGRRK-------GFGFVSFSSREEAKKAVEEM 361
Query: 648 QNSSLDEHQIELKRSNRNLESEA 670
L + + + E A
Sbjct: 362 HGKMLSARPLYVSYARYKQERRA 384
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 96/184 (52%), Gaps = 9/184 (4%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
TT+++ L++N D ++ F++CG + S AR + ++ G+ S G+G+V+F + +++
Sbjct: 300 TTIFVGRLSWNVDNDWLKSEFEECGEVVS---ARVQMDRNTGK--SRGFGYVEFTSPDAV 354
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKS-SNVAKQTGSKILVRNIPFQAKQ 699
ALK L +D I + +S + + + K+ + + S + V N+ F A +
Sbjct: 355 EAALK-LTGKEIDGRPINVDKSTGVSKDKVRDSRAKAFGDQKSEPSSTLFVGNLSFSASE 413
Query: 700 SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
+ E F ++G++K VR+P +G +GF +V+F AK+A + GR +
Sbjct: 414 DVLWEAFASYGDVKGVRMPTDRE-TGQPKGFAYVDFTDIESAKKAHDEGA-GMDIAGRAV 471
Query: 760 VLEW 763
L++
Sbjct: 472 RLDY 475
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +FV NLS++ +ED L + F YG + V +P D+ET + KGFA V F E A +A+
Sbjct: 399 SSTLFVGNLSFSASEDVLWEAFASYGDVKGVRMPTDRETGQPKGFAYVDFTDIESAKKAH 458
Query: 396 QHLDGTVFLGRMLHL 410
G GR + L
Sbjct: 459 DEGAGMDIAGRAVRL 473
>gi|414079549|ref|YP_007000973.1| glycine-rich RNA-binding protein [Anabaena sp. 90]
gi|413972828|gb|AFW96916.1| glycine-rich RNA-binding protein [Anabaena sp. 90]
Length = 99
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY V E+DL ++F +YG + + LPID+ET + +GF V A L
Sbjct: 3 IYVGNLSYQVAEEDLKRVFAEYGTVKKAQLPIDRETGRVRGFGFVEMSSDAEEQAAIAAL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG+ ++GR L + KP+E
Sbjct: 63 DGSEWMGRSLKVNKAKPRE 81
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 37/220 (16%)
Query: 210 SVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFK---PLPLASV---RTTFL--GMA 261
+ PP + R TI V+ + + + L+A+F+ P+ A + R T G+
Sbjct: 163 NTPPEPEITEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKDRVTGRSKGVG 222
Query: 262 YIGFKDEKNCNKALNKNKSFWKGKQL--NIYKYSKDNSAKYS--GAADDNNNASMENIKA 317
Y+ FKDE++ +AL KG + + + K+ +A+ S G A N A
Sbjct: 223 YVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGTAPGANGAPFH---- 278
Query: 318 KHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDK-ETDK 376
R++V N+ ++VTE DL ++FE +G L +VIL D+ +
Sbjct: 279 --------------------RLYVGNIHFSVTEKDLQEIFEPFGELEQVILQRDEMNPGR 318
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
+KG+ V F+ P HA A ++G GR + + G K
Sbjct: 319 SKGYGFVQFVDPSHAKNALAEMNGFELAGRQIRVGLGNDK 358
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 542 GEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHF 601
G+E ++ NT E PE+ E+D ++ T++++ ++ + +R F
Sbjct: 153 GDERRNSRRNNTPPE------PEI---TEDDRDKR-----TIFVQQISQRAETRHLRAFF 198
Query: 602 KKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKV----LQNSSLDEHQI 657
++ GP+ + + + G+ S G G+V+F ES+ QAL++ L+ +
Sbjct: 199 ERVGPVVEAQIVKDR---VTGR--SKGVGYVEFKDEESVPQALELTGQKLKGVPIIAQLT 253
Query: 658 ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 717
E +++ SE T +N A ++ V NI F + +++E+F+ FGEL+ V L
Sbjct: 254 EAEKNRAARPSEGGTAP--GANGAPF--HRLYVGNIHFSVTEKDLQEIFEPFGELEQVIL 309
Query: 718 PKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
+ + G +G+GFV+F+ + AK A+ A L GR++
Sbjct: 310 QRDEMNPGRSKGYGFVQFVDPSHAKNAL-AEMNGFELAGRQI 350
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 84/235 (35%), Gaps = 51/235 (21%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDL-------GRVLVPPYGITGLVEFLQKNQAK 497
R KR I V+ + R L+A FE G + RV G+ G VEF +
Sbjct: 175 RDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKDRVTGRSKGV-GYVEFKDEESVP 233
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEED 557
A L K K VP+ + EA++ + E G G
Sbjct: 234 QAL-ELTGQKLKGVPIIAQ------LTEAEKNRAARPSEGGTAPGANGA----------- 275
Query: 558 NQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
P LY+ N++F+ TE ++ F+ G + V + R D
Sbjct: 276 ---------------------PFHRLYVGNIHFSVTEKDLQEIFEPFGELEQVILQR--D 312
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
+PG+ S GYGFVQF AL + L QI + N E+T
Sbjct: 313 EMNPGR--SKGYGFVQFVDPSHAKNALAEMNGFELAGRQIRVGLGNDKFTPESTA 365
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 573 EEREPEPD----TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
EERE D T +Y+KNL+ +T+D ++ F + G I+S V R D K S
Sbjct: 213 EERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGK------SRC 266
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQT 684
+GFV F E +A++ L D+ + + K+S R LE + S K
Sbjct: 267 FGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFD 326
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
G + V+N+ ++ ELF FG + K +R P SG +G GFV F +EA
Sbjct: 327 GLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDP-----SGTSKGSGFVAFSAASEA 381
Query: 742 KRAMKAL 748
R + +
Sbjct: 382 SRVLNEM 388
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++KNL+ + ++ F CG I S VA GQ S GYGFVQF T +S
Sbjct: 136 LFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHM----GQ--SRGYGFVQFDTEDSAKN 189
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ L L++ QI + R E E+ K K +NV V+N+ E+
Sbjct: 190 AIEKLNGKVLNDKQIFVGPFLRKEERESAADKMKFTNV--------YVKNLSEATTDDEL 241
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ F +G + + + G G R FGFV F +A RA++AL
Sbjct: 242 KTTFGQYGSISSAVVMRD--GDGKSRCFGFVNFENPEDAARAVEAL 285
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L+FN T+ + +F + + SV V R + S+GYG+V + +
Sbjct: 46 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNT-----SLGYGYVNYSNTDDA 100
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A++ L S L+ I + S+R+ + + V + V+N+
Sbjct: 101 EKAMQKLNYSYLNGKMIRITYSSRDSSARRSGV------------GNLFVKNLDKSVDNK 148
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ E F G + ++ +G RG+GFV+F T++ AK A++ L
Sbjct: 149 TLHEAFSGCGTIVSCKVATDHMGQ--SRGYGFVQFDTEDSAKNAIEKL 194
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 33/195 (16%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NLS T+D+L F +YG ++ ++ D + K++ F V F PE A +A + L
Sbjct: 227 VYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGD-GKSRCFGFVNFENPEDAARAVEAL 285
Query: 399 DGTVFLGRMLHLIPGKPKE----------NEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
+G F + ++ + K +G+ DG K D N
Sbjct: 286 NGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGG-------NKFDGLN--------- 329
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSL 503
+ VKNL L+ LF FG + +V+ P G +G V F ++A N +
Sbjct: 330 -LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEM 388
Query: 504 AYTKFKEVPLYLEWA 518
PLY+ A
Sbjct: 389 NGKMVGGKPLYVALA 403
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 165/459 (35%), Gaps = 108/459 (23%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRT-------TFLGMAYIGFKDEKNCNKALNK 277
++ V +L V L YF + + SVR T LG Y+ + + + KA+ K
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N S+ GK + I S+D+SA+ SG
Sbjct: 107 LNYSYLNGKMIRITYSSRDSSARRSGV--------------------------------- 133
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G +FV+NL +V L + F G + + D +++G+ V F + A A +
Sbjct: 134 GNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATD-HMGQSRGYGFVQFDTEDSAKNAIE 192
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
L+G V + + + P KE + K+ F V VKNL
Sbjct: 193 KLNGKVLNDKQIFVGPFLRKEERESAADKMK----------FTNV---------YVKNLS 233
Query: 457 YRTLPTDLKALFEPFGDLGRVLVPPYG-----ITGLVEFLQKNQAKAAFNSLAYTKFKEV 511
T +LK F +G + +V G G V F A A +L KF +
Sbjct: 234 EATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEALNGKKFDD- 292
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
KE GK ++K+E E E ++ ++ + G+
Sbjct: 293 ---------------KEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGL--------- 328
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
LY+KNL+ T++ +R F + G I S V R DP S G GF
Sbjct: 329 ----------NLYVKNLDDTVTDEKLRELFAEFGTITSCKVMR--DPSG----TSKGSGF 372
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V F ++ L + + + + + R E A
Sbjct: 373 VAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRA 411
>gi|434395314|ref|YP_007130261.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428267155|gb|AFZ33101.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 96
Score = 69.3 bits (168), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 48/86 (55%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY TEDDL +F +YG + ++LP D+ET + +GFA V A L
Sbjct: 3 IYVGNLSYRATEDDLRAVFAEYGTVKRIVLPTDRETGRMRGFAFVDMTEDAQEDAAITEL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR L + KP+E +G
Sbjct: 63 DGAEWMGRQLRVNKAKPREENNRRNG 88
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 100/192 (52%), Gaps = 17/192 (8%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T+++ L++N D + + F +CG + S AR + ++ G+ S G+G+V F T E+++
Sbjct: 45 TIFVGKLSWNVDNDWLAQEFAECGEVVS---ARVQMDRNTGK--SRGFGYVTFATVEAVD 99
Query: 642 QALKVLQNS-SLDEHQIELKRSNRNLESEATTVKRKSSNV----AKQTGSKILVRNIPFQ 696
A + QN +D + + +S +E + V++K + A + S + V N+ +
Sbjct: 100 AA--IAQNGKEIDGRAVNIDKS---IEKDKGAVRQKRAEAYGDKASEPSSVLFVGNLSWD 154
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
A + + E F +G++K VR+P +G +GF +VEF +K+A + + G
Sbjct: 155 ATEDTLWETFNEYGDIKSVRVPTDRE-TGKPKGFAYVEFSDIEASKKAFEGAA-GAEVAG 212
Query: 757 RRLVLEWAEEAD 768
R + +++++ D
Sbjct: 213 RNIRVDFSQPRD 224
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV NLS+ TED L + F +YG + V +P D+ET K KGFA V F E + +A++
Sbjct: 146 LFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASKKAFEGA 205
Query: 399 DGTVFLGRMLHLIPGKPKENEG 420
G GR + + +P++ G
Sbjct: 206 AGAEVAGRNIRVDFSQPRDPNG 227
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 23/175 (13%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IFV LS+ V D L + F + G + + +D+ T K++GF VTF E A A
Sbjct: 46 IFVGKLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFGYVTFATVE-AVDAAIAQ 104
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVH---CCISERKLDAFNQVVEARSKRIILVKNL 455
+G GR + N+D + + +++ +A+ S ++ V NL
Sbjct: 105 NGKEIDGRAV------------NIDKSIEKDKGAVRQKRAEAYGDKASEPSS-VLFVGNL 151
Query: 456 PYRTLPTDLKALFEPFGDLGRVLVPPYGITG------LVEFLQKNQAKAAFNSLA 504
+ L F +GD+ V VP TG VEF +K AF A
Sbjct: 152 SWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASKKAFEGAA 206
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 574 EREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQ 633
++ EP + L++ NL++++TED++ F + G I SV V ++ P G+ +V+
Sbjct: 137 DKASEPSSVLFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKP-----KGFAYVE 191
Query: 634 FYTRESLNQALKVLQNSSLDEHQIEL 659
F E+ +A + + + I +
Sbjct: 192 FSDIEASKKAFEGAAGAEVAGRNIRV 217
>gi|359463230|ref|ZP_09251793.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 95
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IFV NLSY +TE DL F ++G + +V LPID+ET K +GFA + +A + L
Sbjct: 3 IFVGNLSYAITEQDLKTAFSQFGAVKQVKLPIDRETGKKQGFAFIEMDNEAEEAKAIKKL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVD 423
DG ++G+ L + KP+ N D
Sbjct: 63 DGGEWMGKTLTVYKAKPRVNRMGSD 87
>gi|71018821|ref|XP_759641.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
gi|74701642|sp|Q4P8R9.1|PABP_USTMA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46099399|gb|EAK84632.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
Length = 651
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 19/195 (9%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T +Y KN++ T+D + F K G I S + R +D K S G+GFV F
Sbjct: 227 TNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGK------SKGFGFVNFEDHNEA 280
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQ 696
+A+ L +S ++ + R+ + E E + K+ +AK G + ++NIP
Sbjct: 281 QKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPES 340
Query: 697 AKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTH 753
+ E F FG + K +R P SG+ RGFGFV + EA +A+ +
Sbjct: 341 YDDERLREEFAPFGAITSCKIMRAP-----SGVSRGFGFVCYSAPEEANKAVSEM-NGKM 394
Query: 754 LYGRRLVLEWAEEAD 768
L R L + A+ D
Sbjct: 395 LDNRPLYVALAQRKD 409
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 117/301 (38%), Gaps = 41/301 (13%)
Query: 227 IVVKNLPAGVKKKDLKAYFKPLPLASVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQ 286
I +KNL AG+ K L F F + +C A N+ S
Sbjct: 137 IFIKNLDAGIDNKALHDTFA-----------------AFGNILSCKVATNETGSLG---- 175
Query: 287 LNIYKYSKDNSAKYSGAADDNNNASMENIK----AKHWKSQEDSVQFAEDIAESGRIFVR 342
Y + +A+ + AA + N + N K H +E + E A ++ +
Sbjct: 176 ---YGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRANFTNVYAK 232
Query: 343 NLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTV 402
N+ VT+D+ KLF K+G + +L D E K+KGF V F A +A L +
Sbjct: 233 NVDPEVTDDEFEKLFTKFGKITSCVLQRD-EDGKSKGFGFVNFEDHNEAQKAVDELHDSD 291
Query: 403 FLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPT 462
F G+ L + + K + + KL F V + +KN+P
Sbjct: 292 FKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVN-------LYLKNIPESYDDE 344
Query: 463 DLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEW 517
L+ F PFG + +++ P G++ G V + +A A + + PLY+
Sbjct: 345 RLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVAL 404
Query: 518 A 518
A
Sbjct: 405 A 405
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ ++ F G I S VA + S+GYGFV + T E+
Sbjct: 137 IFIKNLDAGIDNKALHDTFAAFGNILSCKVATNET-------GSLGYGFVHYETAEAAEA 189
Query: 643 ALKVLQNSSLDEHQI----ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
A+K + L++ ++ + R R + E T + + + +N+ +
Sbjct: 190 AIKHVNGMLLNDKKVYVGHHIPRKERQAKIEET----------RANFTNVYAKNVDPEVT 239
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
E E+LF FG++ L + G +GFGFV F NEA++A+ L + G++
Sbjct: 240 DDEFEKLFTKFGKITSCVLQRDE--DGKSKGFGFVNFEDHNEAQKAVDEL-HDSDFKGQK 296
Query: 759 LVLEWAEEADNVEDIRKRT 777
L + A++ E+ +R+
Sbjct: 297 LFVARAQKKSEREEELRRS 315
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 22/159 (13%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
+T+LY+ L+ + TE + F G +AS+ V R + S+GY +V F
Sbjct: 46 NTSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRR-----SLGYAYVNFLNAAD 100
Query: 640 LNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTG-SKILVRNIPFQAK 698
+A++ L S + + S R+ ++TG I ++N+
Sbjct: 101 GERAMEQLNYSLIRNRPCRIMWSQRD-------------PALRRTGQGNIFIKNLDAGID 147
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
+ + F AFG + ++ GS G+GFV + T
Sbjct: 148 NKALHDTFAAFGNILSCKVATNETGS---LGYGFVHYET 183
>gi|334120717|ref|ZP_08494795.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
gi|333455989|gb|EGK84627.1| RNP-1 like RNA-binding protein [Microcoleus vaginatus FGP-2]
Length = 110
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT++D+T +F +YG + V LP D+ET + +GF V A L
Sbjct: 3 IYVGNLSYQVTQEDITTVFAEYGTVKRVHLPTDRETSRPRGFGFVEMSTDAEEDAAISAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENE 419
DG ++GR L + KP+E+E
Sbjct: 63 DGAEWMGRDLKVNKAKPREDE 83
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ +Q Q ++ +F +G +K V LP S RGFGFVE T E A+ A
Sbjct: 3 IYVGNLSYQVTQEDITTVFAEYGTVKRVHLPTDRETS-RPRGFGFVEMSTDAEEDAAISA 61
Query: 748 LCQSTHLYGRRL 759
L GR L
Sbjct: 62 L-DGAEWMGRDL 72
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 573 EEREPEPD----TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
EERE D T +Y+KNL+ +T+D ++ F + G I+S V R D K S
Sbjct: 213 EERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGK------SRC 266
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQIEL----KRSNRNLESEATTVKRKSSNVAKQT 684
+GFV F E +A++ L D+ + + K+S R LE + S K
Sbjct: 267 FGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFD 326
Query: 685 GSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
G + V+N+ ++ ELF FG + K +R P SG +G GFV F +EA
Sbjct: 327 GLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDP-----SGTSKGSGFVAFSAASEA 381
Query: 742 KRAMKAL 748
R + +
Sbjct: 382 SRVLNEM 388
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++KNL+ + ++ F CG I S VA GQ S GYGFVQF T +S
Sbjct: 136 LFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHM----GQ--SRGYGFVQFDTEDSAKN 189
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ L L++ QI + R E E+ K K +NV V+N+ E+
Sbjct: 190 AIEKLNGKVLNDKQIFVGPFLRKEERESAADKMKFTNV--------YVKNLSEATTDDEL 241
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ F +G + + + G G R FGFV F +A RA++AL
Sbjct: 242 KTTFGQYGSISSAVVMRD--GDGKSRCFGFVNFENPEDAARAVEAL 285
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L+FN T+ + +F + + SV V R + S+GYG+V + +
Sbjct: 46 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNT-----SLGYGYVNYSNTDDA 100
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+A++ L S L+ I + S+R+ + + V + V+N+
Sbjct: 101 EKAMQKLNYSYLNGKMIRITYSSRDSSARRSGV------------GNLFVKNLDKSVDNK 148
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ E F G + ++ +G RG+GFV+F T++ AK A++ L
Sbjct: 149 TLHEAFSGCGTIVSCKVATDHMGQ--SRGYGFVQFDTEDSAKNAIEKL 194
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 33/195 (16%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NLS T+D+L F +YG ++ ++ D + K++ F V F PE A +A + L
Sbjct: 227 VYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGD-GKSRCFGFVNFENPEDAARAVEAL 285
Query: 399 DGTVFLGRMLHLIPGKPKE----------NEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
+G F + ++ + K +G+ DG K D N
Sbjct: 286 NGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGG-------NKFDGLN--------- 329
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSL 503
+ VKNL L+ LF FG + +V+ P G +G V F ++A N +
Sbjct: 330 -LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEM 388
Query: 504 AYTKFKEVPLYLEWA 518
PLY+ A
Sbjct: 389 NGKMVGGKPLYVALA 403
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 165/459 (35%), Gaps = 108/459 (23%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRT-------TFLGMAYIGFKDEKNCNKALNK 277
++ V +L V L YF + + SVR T LG Y+ + + + KA+ K
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N S+ GK + I S+D+SA+ SG
Sbjct: 107 LNYSYLNGKMIRITYSSRDSSARRSGV--------------------------------- 133
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G +FV+NL +V L + F G + + D +++G+ V F + A A +
Sbjct: 134 GNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATD-HMGQSRGYGFVQFDTEDSAKNAIE 192
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
L+G V + + + P KE + K+ F V VKNL
Sbjct: 193 KLNGKVLNDKQIFVGPFLRKEERESAADKMK----------FTNV---------YVKNLS 233
Query: 457 YRTLPTDLKALFEPFGDLGRVLVPPYG-----ITGLVEFLQKNQAKAAFNSLAYTKFKEV 511
T +LK F +G + +V G G V F A A +L KF +
Sbjct: 234 EATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEALNGKKFDD- 292
Query: 512 PLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEE 571
KE GK ++K+E E E ++ ++ + G+
Sbjct: 293 ---------------KEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGL--------- 328
Query: 572 DEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGF 631
LY+KNL+ T++ +R F + G I S V R DP S G GF
Sbjct: 329 ----------NLYVKNLDDTVTDEKLRELFAEFGTITSCKVMR--DPSG----TSKGSGF 372
Query: 632 VQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEA 670
V F ++ L + + + + + R E A
Sbjct: 373 VAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRA 411
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 164/441 (37%), Gaps = 103/441 (23%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
+ ++V +L VTE L + F + GP+ + + D T ++ +A V F P+ A A
Sbjct: 10 TASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQHPKDAEHAL 69
Query: 396 QHLDGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
++ V G+ L ++ P K GN I
Sbjct: 70 DTMNFDVIKGKPLRIMWSQRDPSLRKSGVGN----------------------------I 101
Query: 451 LVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSL 503
VKNL + KAL++ G VL G V F + A+ A +
Sbjct: 102 FVKNL---DKSINNKALYDTVSAFGNVLSCKVVCDENGSKGYGFVHFGTREAAERAIEKM 158
Query: 504 AYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVP 563
+ +++ G+ K + E E E G K+ P
Sbjct: 159 NGIPLNDCKVFV----------------GRFKSRKEREAELGARAKE-----------FP 191
Query: 564 EVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQ 623
V YIKN + ++ ++ F K GP SV V + KS
Sbjct: 192 NV------------------YIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQSGKS--- 230
Query: 624 FLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ 683
G+GFV F E +A+ + L+ QI + R+ + +E + T +KRK + +
Sbjct: 231 ---KGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQD 286
Query: 684 TGSKILVRNIPFQAKQSEV--EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
++ V N+ + + E L KAF + K M+ G +GFGFV F + EA
Sbjct: 287 RITRYQVVNLYVKNLDDAIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKALCQSTHLYGRRLVLE 762
+A+ T + GR + E
Sbjct: 347 TKAV------TEMNGRIVATE 361
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ + TE + F + GPI S+ V R + S Y +V F +
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRR-----SSNYAYVNFQHPK 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
AL + + + + S R+ ++ K I V+N+
Sbjct: 64 DAEHALDTMNFDVIKGKPLRIMWSQRD------------PSLRKSGVGNIFVKNLDKSIN 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTVSAFGNVLSCKVVCDENGS---KGYGFVHFGTREAAERAIEKM 158
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 626 SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTG 685
S GYGFV F TRE+ +A++ + L++ ++ + R E EA R AK+
Sbjct: 137 SKGYGFVHFGTREAAERAIEKMNGIPLNDCKVFVGRFKSRKEREAELGAR-----AKEF- 190
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ ++N +++LF FG V++ SG +GFGFV F +A++A+
Sbjct: 191 PNVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQ--SGKSKGFGFVSFEKHEDAQKAV 248
Query: 746 KALCQSTHLYGRRLVLEWAEE 766
+ L G+++ + A++
Sbjct: 249 DEM-NGKELNGKQIYVGRAQK 268
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFEKHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQVV----NLYVKNLDDAIDDERLRKAFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATEPLYVALAQRKE 372
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 116/293 (39%), Gaps = 42/293 (14%)
Query: 252 SVRTTFLGMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSG--------- 302
S+R + +G ++ D+ NKAL S + G L+ +N +K G
Sbjct: 92 SLRKSGVGNIFVKNLDKSINNKALYDTVSAF-GNVLSCKVVCDENGSKGYGFVHFGTREA 150
Query: 303 ---AADDNNNASMENIKA--KHWKSQ-EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKL 356
A + N + + K +KS+ E + E ++++N + ++ L L
Sbjct: 151 AERAIEKMNGIPLNDCKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 357 FEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPK 416
F K+GP V + D ++ K+KGF V+F E A +A ++G G+ +++
Sbjct: 211 FGKFGPTLSVKVMTD-QSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYV------ 263
Query: 417 ENEGNVDGKVHCCISERKLDA---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFE 469
G KV ER+ + F Q+ + R R + VKNL L+ F
Sbjct: 264 ---GRAQKKV-----ERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDAIDDERLRKAFS 315
Query: 470 PFGDLGRVLVPPYGIT----GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
PFG + V G G V F +A A + PLY+ A
Sbjct: 316 PFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATEPLYVALA 368
>gi|75906353|ref|YP_320649.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75700078|gb|ABA19754.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 103
Score = 69.3 bits (168), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT++D++ +F +YG + V+LP D+ET + +GFA V T A + L
Sbjct: 3 IYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIEGL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KPKE+
Sbjct: 63 DGAEWMGRDLKVNKAKPKED 82
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 162/428 (37%), Gaps = 105/428 (24%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V +L VT+ L LF + GP+ V + D T ++ G+ V + + A +A
Sbjct: 31 STSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAARA- 89
Query: 396 QHLDGTVFLGRMLHLIP--GKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-ILV 452
LD ML+ P GKP R + +F RS I +
Sbjct: 90 --LD-------MLNFTPLNGKPI----------------RIMYSFRDPSIRRSGTANIFI 124
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQAKAAFNSLA 504
KNL D KAL++ F G +L G V+F + AK A + L
Sbjct: 125 KNL---DKAIDNKALYDTFSTFGAILSCKIATDASGQSKGYGFVQFDNEESAKNATDKLN 181
Query: 505 YTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPE 564
+ +Y+ G F +E+ K K
Sbjct: 182 GMLLNDKQVYV-----GPFVRKQERESATNKTKF-------------------------- 210
Query: 565 VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQF 624
+Y+KNL ++T++ ++ F + GPI S V + D K
Sbjct: 211 ----------------NNVYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDGDGK----- 249
Query: 625 LSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN----V 680
S +GFV F + ++++ L D+ + + ++ + E E R + V
Sbjct: 250 -SKCFGFVNFENADDAARSVEALNGKKFDDKEWYVGKAQKKTEREVELKGRFEQSLKEAV 308
Query: 681 AKQTGSKILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFIT 737
K G + V+N+ ++ ELF FG + K +R P +G+ RG GFV F T
Sbjct: 309 DKFQGLNLYVKNLDDSIADDKLRELFSEFGTITSCKVMRDP-----NGISRGSGFVAFST 363
Query: 738 KNEAKRAM 745
EA RA+
Sbjct: 364 AEEASRAL 371
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T+LY+ +L N T+ + F + GP+ SV V R + S+GYG+V + +
Sbjct: 32 TSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRR-----SLGYGYVNYGNTQDA 86
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL +L + L+ I + S R+ +++R + + I ++N+
Sbjct: 87 ARALDMLNFTPLNGKPIRIMYSFRD-----PSIRRSGT-------ANIFIKNLDKAIDNK 134
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F FG + ++ SG +G+GFV+F + AK A L
Sbjct: 135 ALYDTFSTFGAILSCKIATD--ASGQSKGYGFVQFDNEESAKNATDKL 180
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 16/166 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ ++ F G I S +A + GQ S GYGFVQF ES
Sbjct: 122 IFIKNLDKAIDNKALYDTFSTFGAILSCKIATD----ASGQ--SKGYGFVQFDNEESAKN 175
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A L L++ Q+ + R E E+ T K K +NV V+N+ ++
Sbjct: 176 ATDKLNGMLLNDKQVYVGPFVRKQERESATNKTKFNNV--------YVKNLLESTTDEDL 227
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ +F +G + + + G G + FGFV F ++A R+++AL
Sbjct: 228 KNIFGEYGPITSAVVMQD--GDGKSKCFGFVNFENADDAARSVEAL 271
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 15/186 (8%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NL + T++DL +F +YGP+ ++ D + K+K F V F + A ++ + L
Sbjct: 213 VYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDGD-GKSKCFGFVNFENADDAARSVEAL 271
Query: 399 DGTVFLGRMLHLIPGKPK-ENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
+G F + ++ + K E E + G+ + E +D F + + VKNL
Sbjct: 272 NGKKFDDKEWYVGKAQKKTEREVELKGRFEQSLKE-AVDKFQGLN-------LYVKNLDD 323
Query: 458 RTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNSLAYTKFKEVP 512
L+ LF FG + +V+ P GI +G V F +A A + P
Sbjct: 324 SIADDKLRELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASRALADMNGKMVASKP 383
Query: 513 LYLEWA 518
LY+ A
Sbjct: 384 LYVALA 389
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLKAYF---KPLPLASVRTTFLGMA-YIGFKDEKNCNKA 274
+K +++ + VKNL +DLK F P+ A V G + GF + +N + A
Sbjct: 205 TNKTKFNNVYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDGDGKSKCFGFVNFENADDA 264
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIA 334
++ LN K+ D+ Y G A +E +K + E S++ A D
Sbjct: 265 ARSVEA------LNGKKF--DDKEWYVGKAQKKTEREVE-LKGRF----EQSLKEAVDKF 311
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
+ ++V+NL ++ +D L +LF ++G + + D ++G V F E A++A
Sbjct: 312 QGLNLYVKNLDDSIADDKLRELFSEFGTITSCKVMRDP-NGISRGSGFVAFSTAEEASRA 370
Query: 395 YQHLDGTVFLGRMLHLIPGKPKEN 418
++G + + L++ + KE+
Sbjct: 371 LADMNGKMVASKPLYVALAQRKED 394
>gi|17229803|ref|NP_486351.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|81859085|sp|Q9WX39.3|RBPF_NOSS1 RecName: Full=Putative RNA-binding protein RbpF
gi|4850345|dbj|BAA77713.1| RNA binding protein [Anabaena variabilis]
gi|17131403|dbj|BAB74010.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 105
Score = 69.3 bits (168), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT++D++ +F +YG + V+LP D+ET + +GFA V T A + L
Sbjct: 3 IYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIEGL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR L + KPKE+
Sbjct: 63 DGAEWMGRDLKVNKAKPKED 82
>gi|380012874|ref|XP_003690499.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Apis florea]
Length = 902
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 524 AEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTL 583
E + K K +E N E+ + EE+K + + +PE E +E D E + +T+
Sbjct: 606 VETQIKPKIRESRLNLEKNADSEEQKLKTAPPPGFK--MPE-NEQMEIDNMHEMDDKSTV 662
Query: 584 YIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQA 643
+I NL++ ++E+ +R + GPI + R +S GY +VQ E++++A
Sbjct: 663 FISNLDYTASEEEVRNALQPAGPITMFKMIRDYKGRSK------GYCYVQLSNIEAIDKA 716
Query: 644 LKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTG---SKILVRNIPFQAKQS 700
L+ LD I R S+ + + S +K+ V+ +P +
Sbjct: 717 LQ------LDRTPI---RGRPMFVSKCDPNRTRGSGFKYSCSLEKNKLFVKGLPVSTTKE 767
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
E+EE+FK G LK VR+ +G +G +VEF+ +N A +A+ A
Sbjct: 768 ELEEIFKVHGALKEVRIV--TYRNGHSKGLAYVEFMDENSAAKALLA 812
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 25/168 (14%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F+ NL YT +E+++ + GP+ + D + ++KG+ V E +A Q L
Sbjct: 662 VFISNLDYTASEEEVRNALQPAGPITMFKMIRDYK-GRSKGYCYVQLSNIEAIDKALQ-L 719
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
D T GR + + P G+ K C + + KL VK LP
Sbjct: 720 DRTPIRGRPMFVSKCDPNRTRGS-GFKYSCSLEKNKL---------------FVKGLPVS 763
Query: 459 TLPTDLKALFEPFGDLGRVLVPPY------GITGLVEFLQKNQAKAAF 500
T +L+ +F+ G L V + Y G+ VEF+ +N A A
Sbjct: 764 TTKEELEEIFKVHGALKEVRIVTYRNGHSKGL-AYVEFMDENSAAKAL 810
>gi|344236474|gb|EGV92577.1| Polyadenylate-binding protein 4 [Cricetulus griseus]
Length = 524
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 162/426 (38%), Gaps = 101/426 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 4 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 63
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GNV +K
Sbjct: 64 NFDVIKGKPIRIMWSQRDPSLRKSGVGNV----------------------------FIK 95
Query: 454 NLPYRTLPTDLKALFEPFGDLG-----RVLVPPYGITG--LVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +V+ G G V F + A A +
Sbjct: 96 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKM--- 149
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G + K+
Sbjct: 150 -------------NGMLLNDRKVFVGRFKSRKEREAELGAKAKEF--------------- 181
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN +D+++ F + G SV V R DP S
Sbjct: 182 --------------TNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMR--DPSGK----S 221
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAK 682
G+GFV + E N+A++ + + I + R+ + +E +A ++ K +++
Sbjct: 222 KGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISR 281
Query: 683 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 742
G + ++N+ ++ + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 282 YQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV---MLEDGRSKGFGFVCFSSPEEAT 338
Query: 743 RAMKAL 748
+A+ +
Sbjct: 339 KAVTEM 344
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 171/476 (35%), Gaps = 120/476 (25%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------FLGMAYIGFKDEKNCNKALNK 277
++ V +L + V + L F P P+ S+R LG AY+ F+ + +AL+
Sbjct: 3 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 62
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N KGK + I +D S + SG
Sbjct: 63 MNFDVIKGKPIRIMWSQRDPSLRKSGV--------------------------------- 89
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G +F++NL ++ L F +G + + D+ + +KG+A V F E A +A +
Sbjct: 90 GNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIE 147
Query: 397 HLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRII 450
++G VF+GR KE E + K A+ +
Sbjct: 148 KMNGMLLNDRKVFVGRFKSR-----KEREAELGAK------------------AKEFTNV 184
Query: 451 LVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAY 505
+KN +LK LF FG +V+ P G + G V + + A A +
Sbjct: 185 YIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNG 244
Query: 506 TKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEV 565
+ +++ A K+ E+ E + E+ K+E + QGV
Sbjct: 245 KEMSGKAIFVGRAQ-------------KKVERQAELKRKFEQLKQERISR---YQGV--- 285
Query: 566 EENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFL 625
LYIKNL+ ++ +R+ F G I S V +
Sbjct: 286 ----------------NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDG-------R 322
Query: 626 SMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
S G+GFV F + E +A+ + + + + + R E +A + VA
Sbjct: 323 SKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVA 378
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 24/120 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
++++NL T+ ++ L K F +G + A+V+L E ++KGF V F PE AT+A
Sbjct: 287 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML----EDGRSKGFGFVCFSSPEEATKAVT 342
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
++G + + L++ + KE ERK NQ ++ R+ ++ LP
Sbjct: 343 EMNGRIVGSKPLYVALAQRKE--------------ERKAHLTNQYMQ----RVAGMRALP 384
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L+ + TE + F GP+ S+ V R + S+GY +V F
Sbjct: 2 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRR-----SLGYAYVNFQQPADA 56
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL + + I + S R+ ++ K + ++N+
Sbjct: 57 ERALDTMNFDVIKGKPIRIMWSQRD------------PSLRKSGVGNVFIKNLDKSIDNK 104
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+ FV F T+ A +A++ +
Sbjct: 105 ALYDTFSAFGNILSCKVVCDENGS---KGYAFVHFETQEAADKAIEKM 149
>gi|196008415|ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
gi|190583092|gb|EDV23163.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
Length = 622
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 22/186 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T LY+KN + ++D R F++CG I S V R K S G+GFV + T E+
Sbjct: 200 TNLYVKNFRDDISDDEFRDLFEQCGKIVSCVVMRDDSGK------SRGFGFVSYETHEAA 253
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ------TGSKILVRNIP 694
+A++ L D ++ + R+ + +SE + + R+ KQ G + V+N+
Sbjct: 254 QKAVETLNEKEFDLRRMYVARAQK--KSERSALLRRQYEQKKQEMMKRFQGVNLYVKNLD 311
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
+++ + F FG + ++ G+ RGFGFV F + EA +A+ T +
Sbjct: 312 DVIDDAKLRQEFANFGTITSAKVMSD--EKGISRGFGFVCFSSPEEATKAV------TEM 363
Query: 755 YGRRLV 760
GR ++
Sbjct: 364 NGRIII 369
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL + +I F G I S +A ++ S G Y FV F T+E+ N+
Sbjct: 109 IFIKNLEKDIDNKAIYDTFSAFGNILSCKIALDENGNSKG------YAFVHFETQEAANR 162
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L ++ + + S +++ + AK T + V+N E
Sbjct: 163 AIEKVNGMLLSGKKVFVG----HFMSRKERMEKIGNLAAKYT--NLYVKNFRDDISDDEF 216
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+LF+ G K V SG RGFGFV + T A++A++ L
Sbjct: 217 RDLFEQCG--KIVSCVVMRDDSGKSRGFGFVSYETHEAAQKAVETL 260
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 19/163 (11%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
LY+ +L + E + F GPI+S+ V R + S+GY +V F +
Sbjct: 21 LYVGDLAPDVNEAQLYEKFNSTGPISSIRVCRDAITRR-----SLGYAYVNFQQPNDAER 75
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
AL L ++ + S R+ + V I ++N+ +
Sbjct: 76 ALDTLNFDPVNGKPCRIMWSQRDPSLRRSGV------------GNIFIKNLEKDIDNKAI 123
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+ F AFG + ++ + +G +G+ FV F T+ A RA+
Sbjct: 124 YDTFSAFGNILSCKIA--LDENGNSKGYAFVHFETQEAANRAI 164
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+NL + + L + F +G + + D E ++GF V F PE AT+A +
Sbjct: 305 LYVKNLDDVIDDAKLRQEFANFGTITSAKVMSD-EKGISRGFGFVCFSSPEEATKAVTEM 363
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
+G + + + L++ + KE+
Sbjct: 364 NGRIIISKPLYVALAQRKED 383
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 15/186 (8%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V+N +++D+ LFE+ G + ++ D ++ K++GF V++ E A +A + L
Sbjct: 202 LYVKNFRDDISDDEFRDLFEQCGKIVSCVVMRD-DSGKSRGFGFVSYETHEAAQKAVETL 260
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL-VKNLPY 457
+ F R +++ + K + R+ + Q + R + + L VKNL
Sbjct: 261 NEKEFDLRRMYVARAQKKSE--------RSALLRRQYEQKKQEMMKRFQGVNLYVKNLDD 312
Query: 458 RTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVP 512
L+ F FG + +V+ GI+ G V F +A A + P
Sbjct: 313 VIDDAKLRQEFANFGTITSAKVMSDEKGISRGFGFVCFSSPEEATKAVTEMNGRIIISKP 372
Query: 513 LYLEWA 518
LY+ A
Sbjct: 373 LYVALA 378
>gi|302770274|ref|XP_002968556.1| hypothetical protein SELMODRAFT_169951 [Selaginella moellendorffii]
gi|302788312|ref|XP_002975925.1| hypothetical protein SELMODRAFT_175329 [Selaginella moellendorffii]
gi|300156201|gb|EFJ22830.1| hypothetical protein SELMODRAFT_175329 [Selaginella moellendorffii]
gi|300164200|gb|EFJ30810.1| hypothetical protein SELMODRAFT_169951 [Selaginella moellendorffii]
Length = 477
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 39/258 (15%)
Query: 520 EGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQG---VPEVEENVEEDEERE 576
+G+ E K +G + + NE+EG GE+E E Q G ++ E+V+ D++ E
Sbjct: 33 DGIVEEEKADQEGLDLDMNEDEG--GEDEAYTTDHENGLQNGENASADLGESVDVDDDEE 90
Query: 577 -------PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
P + ++I + ++ ED +R CG I V + + K+ + + GY
Sbjct: 91 TKSLLSRPPHGSEVFIGGVTRDTNEDDLRELCSPCGEIFEVRILKDKETGN-----NKGY 145
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
FV + RE+ +A++ L NS L ++ S Q ++
Sbjct: 146 AFVTYTNRETAEKAIETLANSELKGRKLRFSHS--------------------QAKHRLF 185
Query: 690 VRNIPFQAKQSEVEELFKAFGE-LKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ NIP E+E++ G ++ V L K G +RGF FVE+ A A K +
Sbjct: 186 IGNIPKSWDTPELEKILAEEGPGVEGVELLKDPRNPGKNRGFAFVEYYNHACADHARKLM 245
Query: 749 CQSTHLYGRRL-VLEWAE 765
+S+ G + + WA+
Sbjct: 246 SRSSFRLGNNVPTVSWAD 263
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 616 KDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR 675
KDP++PG+ + G+ FV++Y + A K++ SS R N+ + + R
Sbjct: 216 KDPRNPGK--NRGFAFVEYYNHACADHARKLMSRSSF--------RLGNNVPTVSWADPR 265
Query: 676 KSSNVAKQTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
+ A + K++ VRN+P + ++ LF+ GE+ V LP+ G R FGFV
Sbjct: 266 TGAEPAATSQIKVVYVRNLPEAVTEEQLRGLFEHHGEITKVVLPQSKPGQ-PKRDFGFVH 324
Query: 735 FITKNEAKRAMKALCQSTHLYGRRL 759
F +N+A +A++ + L GR L
Sbjct: 325 FADRNDALKAIEK-TEKYELEGRVL 348
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++VRNL VTE+ L LFE +G + +V+LP K + F V F A +A +
Sbjct: 279 VYVRNLPEAVTEEQLRGLFEHHGEITKVVLPQSKPGQPKRDFGFVHFADRNDALKAIEKT 338
Query: 399 DGTVFLGRMLHLIPGKP 415
+ GR+L KP
Sbjct: 339 EKYELEGRVLESSLAKP 355
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F+ ++ EDDL +L G + EV + DKET KG+A VT+ E A +A + L
Sbjct: 104 VFIGGVTRDTNEDDLRELCSPCGEIFEVRILKDKETGNNKGYAFVTYTNRETAEKAIETL 163
Query: 399 DGTVFLGRMLHL 410
+ GR L
Sbjct: 164 ANSELKGRKLRF 175
>gi|427740185|ref|YP_007059729.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
gi|427375226|gb|AFY59182.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
Length = 95
Score = 68.9 bits (167), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT++DL+K+F +YG + V LP D+ET +++GF V + + A Q L
Sbjct: 3 IYVGNLSYDVTQEDLSKVFAEYGSVKRVQLPTDRETGRSRGFGFVEMQSEDEESSAIQAL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG ++GR + + +P+E
Sbjct: 63 DGAEWMGRAMKVNKARPRE 81
Score = 42.0 bits (97), Expect = 1.4, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ + Q ++ ++F +G +K V+LP +G RGFGFVE +++E A++A
Sbjct: 3 IYVGNLSYDVTQEDLSKVFAEYGSVKRVQLPTDR-ETGRSRGFGFVEMQSEDEESSAIQA 61
Query: 748 L 748
L
Sbjct: 62 L 62
>gi|396081852|gb|AFN83466.1| polyadenylate binding protein 2 [Encephalitozoon romaleae SJ-2008]
Length = 411
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+K+LVRN+PFQA + E+ ++F +F + VR+P K G+ RGF FV + +E A+
Sbjct: 334 NKLLVRNVPFQASEKEIRKIFDSFHVVD-VRIPIKREGTS--RGFCFVTLGSPDEVDAAI 390
Query: 746 KALCQSTHLYGRRLVLEWA 764
+ STHLYGRRLVLE A
Sbjct: 391 RHFGSSTHLYGRRLVLEKA 409
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 30 TQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQAALDYFNNTYVFSSRIK 89
T+E+++ +F + G +TDV + +G+FRR FIGY E + A+ Y N + + +I+
Sbjct: 13 TKEEIEKEFSKHGRITDVFMARNGQGRFRRICFIGYMEEKEGVEAIKYRNGSLFKNQKIR 72
Query: 90 VE 91
E
Sbjct: 73 CE 74
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 21/170 (12%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+ +K+L ++T++ I + F K G I V +AR G+F + F+ + + +
Sbjct: 3 IVVKDLPLSTTKEEIEKEFSKHGRITDVFMARN----GQGRFRRIC--FIGYMEEKEGVE 56
Query: 643 ALKVLQNSSLDEHQIELKRSNRNL----ESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
A+K S +I + ++ ESE VK KI +RN+P +
Sbjct: 57 AIKYRNGSLFKNQKIRCEALKEDIVQMGESEKRMVK---------YSRKIFIRNVPMEVS 107
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + + FK +GE++ V L G G + F E EA R++K +
Sbjct: 108 EQIIHDTFKEYGEIEEVGLLDLKEGKGAYVKFSEGECAV--EAYRSVKTI 155
>gi|56752106|ref|YP_172807.1| RRM type RNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81300808|ref|YP_401016.1| RNA-binding region RNP-1 [Synechococcus elongatus PCC 7942]
gi|56687065|dbj|BAD80287.1| RRM type RNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81169689|gb|ABB58029.1| RNA-binding region RNP-1 [Synechococcus elongatus PCC 7942]
Length = 95
Score = 68.9 bits (167), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLS+ TE+D+ ++F +YGP++ V LP+D+ET + +GFA + H A L
Sbjct: 3 IYVGNLSFRATEEDVREVFAEYGPVSRVSLPVDRETGRLRGFAFIEMEEDAHEDAAISEL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG + GR L + +PK++
Sbjct: 63 DGAEWFGRQLRVSKARPKDD 82
>gi|348677689|gb|EGZ17506.1| hypothetical protein PHYSODRAFT_501188 [Phytophthora sojae]
Length = 293
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 30/221 (13%)
Query: 573 EEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFV 632
EE + + + T+Y++ + + + E + HF CG + V + R +D P GY V
Sbjct: 60 EEIDRKTEATVYVEGIPYRANEGDLVTHFSSCGTVREVRMPRYQDSGKP-----RGYAHV 114
Query: 633 QFYTRESLNQALKVLQNSSLDEHQIELKRSN--RNLESEATTVKRKSSNVAKQT--GSK- 687
F +L +ALK L L + ++R+ R +E +K K+ N K+ G +
Sbjct: 115 VFDDEAALKKALK-LDGQYLFNRYLSIRRAEAPRAVE---MALKEKNQNTTKKAVKGCRT 170
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLP-----KKMVGSGLHRGFGFVEFITKNEAK 742
+ ++ +P++ ++ + E + G + VRLP KK+ +GFG+VEF +++E
Sbjct: 171 VFIKQLPYEVEEGTIREALASCGTITSVRLPIWNHTKKL------KGFGYVEFSSEDE-- 222
Query: 743 RAMKALCQSTHLYGRRLVLEWAEEADNV--EDIRKRTNRYF 781
A+ A +S G R+VL + A + R+R +Y+
Sbjct: 223 -ALAAARRSGMKIGDRMVLISLDAAGSAPKASFRQRDGQYW 262
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 78/205 (38%), Gaps = 32/205 (15%)
Query: 216 KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----------GMAYIGF 265
K + ++ T+ V+ +P + DL +F +VR + G A++ F
Sbjct: 59 KEEIDRKTEATVYVEGIPYRANEGDLVTHFSSC--GTVREVRMPRYQDSGKPRGYAHVVF 116
Query: 266 KDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQED 325
DE KAL + + + L+I + + + + + N N + + +K
Sbjct: 117 DDEAALKKALKLDGQYLFNRYLSIRRAEAPRAVEMA-LKEKNQNTTKKAVKGCR------ 169
Query: 326 SVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF 385
+F++ L Y V E + + G + V LPI T K KGF V F
Sbjct: 170 ------------TVFIKQLPYEVEEGTIREALASCGTITSVRLPIWNHTKKLKGFGYVEF 217
Query: 386 LMPEHATQAYQHLDGTVFLGRMLHL 410
+ A A + G RM+ +
Sbjct: 218 SSEDEALAAARR-SGMKIGDRMVLI 241
>gi|320165216|gb|EFW42115.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 570
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 90/168 (53%), Gaps = 12/168 (7%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+Y+ ++ F + E +R +CGPI SV+ DP +P + G+GFV++ ES +
Sbjct: 199 VYVGSIPFEAGEREVRAAMSECGPIRSVSFV--NDPVAPTRH--KGFGFVEYEYPESGDI 254
Query: 643 ALKVLQNSSLDEHQIELKRSN--RNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
L + ++ + + Q++ N + ++ ++++ S T + V NI + +S
Sbjct: 255 VLSQMHHARIGDRQLKFGTPNAPQPMQVLIEELRKEGS-----TFPHVFVANIHPELSES 309
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
++ E+F++FG + + L +V +G H+G G+V+F + AK A+ AL
Sbjct: 310 DIREVFQSFGPVAYCILMVDLV-TGRHKGCGYVQFESLQTAKDAIAAL 356
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV N+ ++E D+ ++F+ +GP+A IL +D T + KG V F + A A L
Sbjct: 297 VFVANIHPELSESDIREVFQSFGPVAYCILMVDLVTGRHKGCGYVQFESLQTAKDAIAAL 356
Query: 399 DGTVFLGRMLHLIPG 413
+ G +LH++ G
Sbjct: 357 NRLDLGGLLLHVVKG 371
>gi|158333760|ref|YP_001514932.1| RNA-binding domain-containing protein [Acaryochloris marina
MBIC11017]
gi|359463897|ref|ZP_09252460.1| RNA-binding region [Acaryochloris sp. CCMEE 5410]
gi|158304001|gb|ABW25618.1| RNA-binding region [Acaryochloris marina MBIC11017]
Length = 95
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VTE DL +F +YG + LP D+ET + +GF V T+A + L
Sbjct: 3 IYVGNLSYDVTEQDLNTVFAEYGTVKSAKLPTDRETGRVRGFGFVEMSDDAEETKAIEEL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG ++GR L + KP+E
Sbjct: 63 DGAEWMGRTLKVNKAKPRE 81
>gi|428175787|gb|EKX44675.1| hypothetical protein GUITHDRAFT_109453 [Guillardia theta CCMP2712]
Length = 163
Score = 68.9 bits (167), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 675 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 734
+ S + A Q SK+++RN+PF+A + E+ +L +FGEL +RLP K GS HRGF F E
Sbjct: 16 KPSDSQAPQDCSKLVIRNVPFEANKKELRDLLSSFGELTSLRLPSKFDGS--HRGFAFAE 73
Query: 735 FITKNEAKRAMKALCQST 752
F+T + KA+C S+
Sbjct: 74 FVTCYAEDQIPKAMCFSS 91
>gi|358332953|dbj|GAA51534.1| squamous cell carcinoma antigen recognized by T-cells 3 [Clonorchis
sinensis]
Length = 898
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 532 GKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE-ENVEEDEEREPEPDTTLYIKNLNF 590
K+ + + +EGE E + T+ G P+ E+V D R+ D T+++ NL++
Sbjct: 584 AKKPKSSTKEGEIAEPPCGKQTS-----VGSPKAHGEHVVHDPSRD---DRTVFVSNLDY 635
Query: 591 NSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNS 650
++TED +RR F++CG ++SV + R + S GY +V+F + + ALK +
Sbjct: 636 STTEDDLRRTFEECGKLSSVRLVRDYAGR------SKGYAYVEFEQASAADVALKKDRQP 689
Query: 651 SLDEHQIELKRSNRNLESEATT--VKRKSSNVAKQTG----------SKILVRNIPFQAK 698
E S + + A V R N +K +G K+ VRN+ +
Sbjct: 690 IGPSAASEATPSTDDTMTIARPMFVSRCDPNRSKSSGFQYSAGKLEPEKLFVRNLDKRVT 749
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
+E+LF G + VR+ +G +G +VEF ++A RA+ A
Sbjct: 750 AHALEQLFGEHGTVVSVRI--ATYRNGAPKGHAYVEFANADQASRALVA 796
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 70/183 (38%), Gaps = 37/183 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTF------------- 385
+FV NL Y+ TEDDL + FE+ G L+ V L + ++KG+A V F
Sbjct: 628 VFVSNLDYSTTEDDLRRTFEECGKLSSVRL-VRDYAGRSKGYAYVEFEQASAADVALKKD 686
Query: 386 ---LMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVV 442
+ P A++A D T+ + R + + C + K F
Sbjct: 687 RQPIGPSAASEATPSTDDTMTIARPMFV---------------SRCDPNRSKSSGFQYSA 731
Query: 443 EARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPY--GIT---GLVEFLQKNQAK 497
+ V+NL R L+ LF G + V + Y G VEF +QA
Sbjct: 732 GKLEPEKLFVRNLDKRVTAHALEQLFGEHGTVVSVRIATYRNGAPKGHAYVEFANADQAS 791
Query: 498 AAF 500
A
Sbjct: 792 RAL 794
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 222 RQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT------FLGMAYIGFKDEKNCNKA 274
R T+ V NL + DL+ F+ L+SVR G AY+ F+ + A
Sbjct: 623 RDDRTVFVSNLDYSTTEDDLRRTFEECGKLSSVRLVRDYAGRSKGYAYVEFEQASAADVA 682
Query: 275 LNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNAS--MENIKAKHWKSQEDSVQFAED 332
L K++ +++ + + DD + M + +S+ Q++
Sbjct: 683 LKKDRQ----------PIGPSAASEATPSTDDTMTIARPMFVSRCDPNRSKSSGFQYSAG 732
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
E ++FVRNL VT L +LF ++G + V + + KG A V F + A+
Sbjct: 733 KLEPEKLFVRNLDKRVTAHALEQLFGEHGTVVSVRIATYR-NGAPKGHAYVEFANADQAS 791
Query: 393 QAYQHLDGTV 402
+A DG +
Sbjct: 792 RALVATDGLL 801
>gi|451854943|gb|EMD68235.1| hypothetical protein COCSADRAFT_270468 [Cochliobolus sativus
ND90Pr]
Length = 749
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 158/427 (37%), Gaps = 114/427 (26%)
Query: 213 PVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------FLGMAYIG 264
P S AP H + ++ V L V + L F + +AS+R LG AY+
Sbjct: 36 PTSAAPAHNQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVN 95
Query: 265 FKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
+ ++ KAL + N + KGK I +D + + +G
Sbjct: 96 YNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTG--------------------- 134
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
G +F++NL + + L F +G + + D E +KG+ V
Sbjct: 135 ------------QGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQD-ELGNSKGYGFV 181
Query: 384 TFLMPEHATQAYQHLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
+ E A A +H++G VF+G H IP K + ++ E K +
Sbjct: 182 HYETAEAANNAIKHVNGMLLNEKKVFVG---HHIPKKERMSK----------FEEMKANF 228
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFL 491
N I VKN+ + + LFE GD+ + G G V ++
Sbjct: 229 TN----------IYVKNIDLDVSDEEFRELFEKHGDITSASIARDEQGKSRGF-GFVNYI 277
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
+ A AA ++L T F+ LY+ G+ ++K+E E E ++ +
Sbjct: 278 KHEAASAAVDALNDTDFRGQKLYV----------------GRAQKKHEREEELRKQYEAA 321
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
++ QGV LYIKNLN + ++ +R F G I S
Sbjct: 322 RLEKQSKYQGV-------------------NLYIKNLNDDVDDEKLRDMFTPFGTITSAK 362
Query: 612 VARKKDP 618
V R P
Sbjct: 363 VMRDAMP 369
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 165/421 (39%), Gaps = 77/421 (18%)
Query: 303 AADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGP 362
AD N N+ A ++ + S ++V L +VTE L +LF G
Sbjct: 14 GADANGAQINTNVAAAQAEAPTPTSAAPAHNQNSASLYVGELDPSVTEAMLFELFSSIGQ 73
Query: 363 LAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNV 422
+A + + D T ++ G+A V + E +A + L+ TV I GKP
Sbjct: 74 VASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTV--------IKGKP------- 118
Query: 423 DGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVP 480
C I + D + + + +KNL + L F FG++ +V
Sbjct: 119 -----CRIMWSQRDP---ALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQD 170
Query: 481 PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
G + F+ A+AA N++ + G+ K+ G K E
Sbjct: 171 ELGNSKGYGFVHYETAEAANNAIKHVN-------------GMLLNEKKVFVGHHIPKKER 217
Query: 541 EGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRH 600
+ EE K N T +Y+KN++ + +++ R
Sbjct: 218 MSKF--EEMKANF---------------------------TNIYVKNIDLDVSDEEFREL 248
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
F+K G I S ++AR + K S G+GFV + E+ + A+ L ++ ++ +
Sbjct: 249 FEKHGDITSASIARDEQGK------SRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVG 302
Query: 661 RSNRNLESEATTVKR-KSSNVAKQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVR 716
R+ + E E K+ +++ + KQ+ G + ++N+ ++ ++F FG + +
Sbjct: 303 RAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAK 362
Query: 717 L 717
+
Sbjct: 363 V 363
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 28/201 (13%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ ++ F G I S VA+ + S GYGFV + T E+ N
Sbjct: 138 VFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNS------KGYGFVHYETAEAANN 191
Query: 643 ALKVLQNSSLDE------HQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
A+K + L+E H I K E K + I V+NI
Sbjct: 192 AIKHVNGMLLNEKKVFVGHHIPKKERMSKFEE------------MKANFTNIYVKNIDLD 239
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
E ELF+ G++ + + G RGFGFV +I A A+ AL T G
Sbjct: 240 VSDEEFRELFEKHGDITSASIARDEQGK--SRGFGFVNYIKHEAASAAVDAL-NDTDFRG 296
Query: 757 RRLVLEWAEEA-DNVEDIRKR 776
++L + A++ + E++RK+
Sbjct: 297 QKLYVGRAQKKHEREEELRKQ 317
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 14 HISLLDLDEVEFIYKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQA 73
++ +DLD ++ E+ + FE+ G +T + +GK R F F+ Y + + A A
Sbjct: 232 YVKNIDLD-------VSDEEFRELFEKHGDITSASIARDEQGKSRGFGFVNYIKHEAASA 284
Query: 74 ALDYFNNTYVFSSRIKVEKC 93
A+D N+T ++ V +
Sbjct: 285 AVDALNDTDFRGQKLYVGRA 304
>gi|425466928|ref|ZP_18846222.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
gi|389830427|emb|CCI27639.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
Length = 97
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IFV NLSY ++++DL +F++YG + V +P+DKET + +GFA V T A + L
Sbjct: 3 IFVGNLSYEISQEDLVDVFKEYGKVQRVHIPVDKETGRKRGFAFVEMESKAQETTAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR + + + +E +G
Sbjct: 63 DGAEWMGRSIKVNQAREREERAPFNG 88
>gi|425765815|gb|EKV04463.1| hypothetical protein PDIG_89590 [Penicillium digitatum PHI26]
gi|425765816|gb|EKV04464.1| hypothetical protein PDIG_89600 [Penicillium digitatum PHI26]
gi|425783904|gb|EKV21721.1| hypothetical protein PDIP_03860 [Penicillium digitatum Pd1]
Length = 298
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 93/188 (49%), Gaps = 18/188 (9%)
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
P P TTLY+ NL F+ T + +R+HF+K G + + + + LS G+G+V + T
Sbjct: 61 PVPKTTLYVGNLFFDVTAEDLRKHFEKFGVVENALIVHD------ARGLSKGFGYVTYST 114
Query: 637 RESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
E +A+ L+ ++ ++ SN T + K S + + N+P++
Sbjct: 115 IEEATEAITQQHGGILEGREVVVQFSNSTYR---TALDGKPSKT-------LYIGNVPYE 164
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
++++LF + VR+P +GL RGFG ++F + A A + L + YG
Sbjct: 165 LTDQDLQDLFDDVPGVTDVRIPVDR-RTGLPRGFGHIDFADQTSASHAKEVLSRKAP-YG 222
Query: 757 RRLVLEWA 764
R+L++ +A
Sbjct: 223 RKLIVTFA 230
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 312 MENIKAKHWKSQEDSVQ--------FAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL 363
+E+++ + KS++ +Q +E ++V NL + VT +DL K FEK+G +
Sbjct: 32 VESVRPQQSKSEQIRLQRHERRRQYVSEGPVPKTTLYVGNLFFDVTAEDLRKHFEKFG-V 90
Query: 364 AEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGR 406
E L + +KGF VT+ E AT+A G + GR
Sbjct: 91 VENALIVHDARGLSKGFGYVTYSTIEEATEAITQQHGGILEGR 133
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 174/452 (38%), Gaps = 112/452 (24%)
Query: 325 DSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVT 384
D+ QF S ++V +L +V + L LF + G + V + D T ++ G+ V
Sbjct: 33 DARQFV-----STSLYVGDLDLSVNDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVN 87
Query: 385 FLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEA 444
+ AT+A L+ T + GKP + S R + +
Sbjct: 88 YNAAHEATRALDELNFTP--------LNGKP----------IRIMYSYR-----DPTIRK 124
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT--------GLVEFLQKNQA 496
I +KNL D KAL + F G +L G V+F + A
Sbjct: 125 SGAGNIFIKNLDKSI---DNKALHDTFSTFGNILSCKVATDSLGQSRGYGFVQFDNEESA 181
Query: 497 KAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEE 556
K+A + L G+ K+ G K E +E+TA++
Sbjct: 182 KSAIDKL----------------NGMLLNDKQVFVGPFLRKQE----------RESTADK 215
Query: 557 DNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKK 616
V Y+KNL+ +TED +++ F + G I S V R
Sbjct: 216 TRFNNV---------------------YVKNLSETTTEDDLKKIFGEFGIITSTAVMRDA 254
Query: 617 DPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRK 676
D K S +GFV F + ++++ L D+ + + ++ + E E +K K
Sbjct: 255 DGK------SKCFGFVNFDDPDDAARSVEALNGKKFDDKEWYVGKAQKKYERE-MELKGK 307
Query: 677 SSNVAKQTGSK-----ILVRNIPFQAKQSEVEELFKAFGEL---KFVRLPKKMVGSGLHR 728
K+T K + V+N+ +++ELF FG + K +R P +G+ R
Sbjct: 308 FEQSLKETADKFEGLNLYVKNLDDSISDDKLKELFSEFGTITSCKVMRDP-----NGISR 362
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLV 760
G GFV F T EA +A+ T + G+ +V
Sbjct: 363 GSGFVAFSTAEEASKAL------TEMNGKMVV 388
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 128/316 (40%), Gaps = 56/316 (17%)
Query: 219 VHKRQYHTIVVKNLPAGVKKKDLK---AYFKPLPLASVRTTFLGMA----YIGFKDEKNC 271
+ K I +KNL + K L + F + V T LG + ++ F +E++
Sbjct: 122 IRKSGAGNIFIKNLDKSIDNKALHDTFSTFGNILSCKVATDSLGQSRGYGFVQFDNEESA 181
Query: 272 NKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFA 330
A++K N KQ+ + + ++ + +S D +F
Sbjct: 182 KSAIDKLNGMLLNDKQVFVGPF----------------------LRKQERESTADKTRF- 218
Query: 331 EDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEH 390
++V+NLS T TEDDL K+F ++G + + D + K+K F V F P+
Sbjct: 219 ------NNVYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDAD-GKSKCFGFVNFDDPDD 271
Query: 391 ATQAYQHLDGTVFLGRMLHLIPGKPK-ENEGNVDGKVHCCISER--KLDAFNQVVEARSK 447
A ++ + L+G F + ++ + K E E + GK + E K + N
Sbjct: 272 AARSVEALNGKKFDDKEWYVGKAQKKYEREMELKGKFEQSLKETADKFEGLN-------- 323
Query: 448 RIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGI---TGLVEFLQKNQAKAAFNS 502
+ VKNL LK LF FG + +V+ P GI +G V F +A A
Sbjct: 324 --LYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKALTE 381
Query: 503 LAYTKFKEVPLYLEWA 518
+ PLY+ A
Sbjct: 382 MNGKMVVSKPLYVALA 397
>gi|166367328|ref|YP_001659601.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|425440525|ref|ZP_18820825.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
gi|166089701|dbj|BAG04409.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|389719028|emb|CCH97091.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
Length = 100
Score = 68.9 bits (167), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL Y VT DDL ++F +YG ++ V LP+D+ET K +GF V E +A + L
Sbjct: 3 IYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIETL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG ++GR + + +PKE+
Sbjct: 63 DGAEWMGRQMKVNKARPKED 82
>gi|357146461|ref|XP_003574000.1| PREDICTED: splicing factor 3B subunit 4-like [Brachypodium
distachyon]
Length = 359
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 562 VPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
P V N+ E D T Y+ NL+ +E+ + F + GP+ +V V PK
Sbjct: 6 APGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYV-----PKDR 60
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
L GYGFV+F + E + A+K+L L I + +++++ +KS +V
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKILNMLKLYGKPIRVNKASQD---------KKSLDV- 110
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGEL----KFVRLPKKMVGSGLHRGFGFVEFIT 737
G+ + + N+ + + + + F AFG + K +R P+ +G RGFGFV + +
Sbjct: 111 ---GANLFIGNLDPEVDEKLLYDTFSAFGVIVTNPKIMRDPE----TGNSRGFGFVSYDS 163
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
+ +A++A+ + HL R + + +A + D
Sbjct: 164 FESSDQAIEAM-NNQHLCNRPITVSYAYKKD 193
>gi|443478888|ref|ZP_21068579.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443015762|gb|ELS30586.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 109
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VTEDDL +F +YG + V LPID+E+ + +GFA V + A L
Sbjct: 3 IYVGNLSYEVTEDDLKAVFSEYGKITRVHLPIDRESGRPRGFAFVEMTEEKEEDAAIVAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
D ++GR L + KP+E+
Sbjct: 63 DEAEWMGRALKVNKAKPRES 82
>gi|380470517|emb|CCF47704.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 769
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
E + +L++++L +T +S+ F + P+ TV K K+ S GYGFV
Sbjct: 46 EANRSLFVRSLPATATSESLTDFFSEHFPVKHATVVLDKATKA-----SRGYGFVTLTDA 100
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSN-RNLESEATTV---------KRKSSNVAKQTGSK 687
E +A K L N + +I + + R+ +S+ + V KR + K
Sbjct: 101 EDAMEAKKKLNNMMWEGRRIRVDVAEARSRDSKESVVGAAAAGQKQKRTQELEEARKPPK 160
Query: 688 ILVRNIPFQAKQS-EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMK 746
+++RN+P+ K S ++ LF+A+G +KF LP+ G +GFGFV + A++A++
Sbjct: 161 LIIRNLPWSIKTSAQLGALFRAYGIIKFADLPQ---NKGKLKGFGFVTLRGRKNAEKALE 217
Query: 747 ALCQSTHLYGRRLVLEWA 764
+ GR + ++WA
Sbjct: 218 --MNGKEIDGRTIAVDWA 233
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FVR+L T T + LT F ++ P+ + +DK T ++G+ VT E A +A + L
Sbjct: 51 LFVRSLPATATSESLTDFFSEHFPVKHATVVLDKATKASRGYGFVTLTDAEDAMEAKKKL 110
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+ ++ GR + + + + + + V + +K ++ EAR ++++NLP+
Sbjct: 111 NNMMWEGRRIRVDVAEARSRDSK-ESVVGAAAAGQKQKRTQELEEARKPPKLIIRNLPWS 169
Query: 459 T-LPTDLKALFEPFG 472
L ALF +G
Sbjct: 170 IKTSAQLGALFRAYG 184
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFL 386
+F+RNL +TVT+D L + F K+GP+ + +D+ TD+ G V F+
Sbjct: 354 LFIRNLPFTVTDDQLKEHFVKFGPVRYARVVMDRATDRPAGTGFVCFV 401
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 20/89 (22%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+TL+I+NL F T+D ++ HF K GP+ V + P G GFV F
Sbjct: 352 STLFIRNLPFTVTDDQLKEHFVKFGPVRYARVVMDRATDRPA-----GTGFVCFVNEADA 406
Query: 641 NQALK---------------VLQNSSLDE 654
+K VLQ+ S D+
Sbjct: 407 KACIKGAPRTQPTTLPTKHSVLQDDSADQ 435
>gi|218438646|ref|YP_002376975.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218171374|gb|ACK70107.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 105
Score = 68.9 bits (167), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 51/83 (61%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NL Y VT+D+L ++F +YG ++ V LP+D+ET + +GF V A + L
Sbjct: 3 IYVGNLYYEVTQDELREVFAEYGTVSRVYLPVDRETGRMRGFGFVEMSTDAEEDTAIETL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG ++GR L + +P+EN+ N
Sbjct: 63 DGAEWMGRQLKVNKARPRENDNN 85
Score = 40.4 bits (93), Expect = 3.8, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ ++ Q E+ E+F +G + V LP +G RGFGFVE T E A++
Sbjct: 3 IYVGNLYYEVTQDELREVFAEYGTVSRVYLPVDR-ETGRMRGFGFVEMSTDAEEDTAIET 61
Query: 748 LCQSTHLYGRRLVLEWAEEADN 769
L GR+L + A +N
Sbjct: 62 L-DGAEWMGRQLKVNKARPREN 82
>gi|167517070|ref|XP_001742876.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779500|gb|EDQ93114.1| predicted protein [Monosiga brevicollis MX1]
Length = 1825
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 34/190 (17%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
D T+++KNL+F+ TED +R F CG I V + K + GY +++F + +
Sbjct: 649 DRTVFVKNLDFSVTEDELRARFADCGEIVDVRMPFNHKGK------AKGYAYLEFASASA 702
Query: 640 LNQALK----------VLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKIL 689
+N AL +L + +D Q+ +L + TT K S +
Sbjct: 703 VNPALSKDRQIMGTRPMLVDRYVDRSQMP------SLPFKHTTDKNPKS---------LF 747
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALC 749
V+N+ ++A ++E+++LF G ++ VRL K GS R F +V+F+T+ +A +A AL
Sbjct: 748 VKNLDYKASEAEIKDLFNKHGAVEAVRLVTKFDGS--RRDFCYVDFVTEADAAKAQAAL- 804
Query: 750 QSTHLYGRRL 759
L+GR L
Sbjct: 805 DGHMLHGRAL 814
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 40/213 (18%)
Query: 217 APVHKRQYH-------TIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTF------LGMAY 262
APV RQ H T+ VKNL V + +L+A F + VR F G AY
Sbjct: 635 APVAPRQAHKVEAEDRTVFVKNLDFSVTEDELRARFADCGEIVDVRMPFNHKGKAKGYAY 694
Query: 263 IGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKS 322
+ F N AL+K++ + + + +Y + + M ++ KH
Sbjct: 695 LEFASASAVNPALSKDRQIMGTRPMLVDRYV--------------DRSQMPSLPFKHTTD 740
Query: 323 QEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFAL 382
+ +FV+NL Y +E ++ LF K+G + V L + K + F
Sbjct: 741 KNPK-----------SLFVKNLDYKASEAEIKDLFNKHGAVEAVRL-VTKFDGSRRDFCY 788
Query: 383 VTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKP 415
V F+ A +A LDG + GR L + KP
Sbjct: 789 VDFVTEADAAKAQAALDGHMLHGRALRVNISKP 821
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 6 SGPVVPRNHISLLDLDEVEFI----YKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFA 61
S PV PR + D F+ + +T+++L+A+F + G + DV++ + +GK + +A
Sbjct: 634 SAPVAPRQAHKVEAEDRTVFVKNLDFSVTEDELRARFADCGEIVDVRMPFNHKGKAKGYA 693
Query: 62 FIGYHREDQAQAAL 75
++ + AL
Sbjct: 694 YLEFASASAVNPAL 707
>gi|391344304|ref|XP_003746441.1| PREDICTED: ELAV-like protein 4-like [Metaseiulus occidentalis]
Length = 394
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 546 EEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPD--TTLYIKNLNFNSTEDSIRRHFKK 603
E EN A+ +Q P+ ++ D T L + L T++ IR F
Sbjct: 30 EMNGIENQAQSQSQSPGPQTNGLHSPSQQAGAGEDSKTNLIVNYLPQTMTQEEIRSLFSS 89
Query: 604 CGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSN 663
G + S + R K GQ S+GYGFV + E+ +A+ L L I++ +
Sbjct: 90 IGEVESCKLIRDK---VTGQ--SLGYGFVNYVCAEAAEKAINTLNGLRLQNKTIKVSYA- 143
Query: 664 RNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG 723
R SS K G+ + V +P Q ++E+LF +G + R+ +
Sbjct: 144 -----------RPSSEAIK--GANLYVSGLPKSMTQQDLEQLFAPYGGIITSRILCDNIT 190
Query: 724 SGLHRGFGFVEFITKNEAKRAMKAL 748
+GL +G GFV F + EA+RA+K L
Sbjct: 191 AGLSKGVGFVRFDQRVEAERAIKHL 215
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IFV NL+ E+ L +LF +G + V + D +T+K KGF VT + A A Q L
Sbjct: 314 IFVYNLAPDTEENLLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQTL 373
Query: 399 DGTVFLGRMLHL 410
+G R+L +
Sbjct: 374 NGYTLGNRVLQV 385
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 32/172 (18%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+ V L T+T++++ LF G + L DK T ++ G+ V ++ E A +A L
Sbjct: 69 LIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYVCAEAAEKAINTL 128
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
+G + + + +P EA + V LP
Sbjct: 129 NGLRLQNKTIKVSYARPSS-------------------------EAIKGANLYVSGLPKS 163
Query: 459 TLPTDLKALFEPFGDL--GRVLVP--PYGIT---GLVEFLQKNQAKAAFNSL 503
DL+ LF P+G + R+L G++ G V F Q+ +A+ A L
Sbjct: 164 MTQQDLEQLFAPYGGIITSRILCDNITAGLSKGVGFVRFDQRVEAERAIKHL 215
>gi|126137970|ref|XP_001385508.1| Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein) (PABP) (ARS consensus binding
protein ACBP-67) (Polyadenylate tail-binding protein)
[Scheffersomyces stipitis CBS 6054]
gi|158513407|sp|A3LXL0.1|PABP_PICST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|126092786|gb|ABN67479.1| Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein) (PABP) (ARS consensus binding
protein ACBP-67) (Polyadenylate tail-binding protein)
[Scheffersomyces stipitis CBS 6054]
Length = 632
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 99/194 (51%), Gaps = 17/194 (8%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T +Y+KN++ +E+ +++ F G I S+ + + + K S G+GFV + E+
Sbjct: 233 TNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAEGK------SKGFGFVNYEGHEAA 286
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN-----VAKQTGSKILVRNIPF 695
+A++ L + ++ +I + R+ + E +K++ N ++K G + ++N+
Sbjct: 287 VKAVEELNDKEINGQKIYVGRAQKKRE-RMEELKKQYENTRLEKLSKYQGVNLFIKNLDD 345
Query: 696 QAKQSEVEELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
++EE FK FG + R+ MV +G +GFGFV F + EA +A+ + Q
Sbjct: 346 TIDSEKLEEEFKPFGTITSARV---MVDETGKSKGFGFVCFSSPEEATKAITEMNQRM-F 401
Query: 755 YGRRLVLEWAEEAD 768
+G+ L + A+ D
Sbjct: 402 FGKPLYVALAQRKD 415
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 13/207 (6%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
KH ++ +F E A I+V+N+ +E+DL KLF YG + + L D E K
Sbjct: 213 GKHISKKDRESKFEEIKANFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAE-GK 271
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
+KGF V + E A +A + L+ G+ +++ + K K + KL
Sbjct: 272 SKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLS 331
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFL 491
+ V + +KNL L+ F+PFG + RV+V G + G V F
Sbjct: 332 KYQGVN-------LFIKNLDDTIDSEKLEEEFKPFGTITSARVMVDETGKSKGFGFVCFS 384
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+A A + F PLY+ A
Sbjct: 385 SPEEATKAITEMNQRMFFGKPLYVALA 411
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 42/264 (15%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL---------GMAYIGFKDEKNC 271
K + I VKN+ ++DLK F P ++ + +L G ++ ++ +
Sbjct: 229 KANFTNIYVKNIDLEYSEEDLKKLFTPY--GAITSIYLEKDAEGKSKGFGFVNYEGHEAA 286
Query: 272 NKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAE 331
KA+ + K++N K Y G A ME +K ++ ++ + + +
Sbjct: 287 VKAVEE----LNDKEINGQKI-------YVGRAQKKRE-RMEELKKQYENTRLEKLSKYQ 334
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
+ +F++NL T+ + L + F+ +G + + +D ET K+KGF V F PE A
Sbjct: 335 GV----NLFIKNLDDTIDSEKLEEEFKPFGTITSARVMVD-ETGKSKGFGFVCFSSPEEA 389
Query: 392 TQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL 451
T+A ++ +F G+ L++ + K+ V E+++ A NQ+ R +
Sbjct: 390 TKAITEMNQRMFFGKPLYVALAQRKD--------VRRSQLEQQIQARNQM---RMQNAAA 438
Query: 452 VKNLPYRTLPTDL---KALFEPFG 472
+P + +P + F P G
Sbjct: 439 TGGIPGQFIPPMFYGQQGFFPPNG 462
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 162/428 (37%), Gaps = 96/428 (22%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------FLGMAYIGFKDEKNCNKALNK 277
++ V L V + L F P+ ++S+R LG AY+ + ++ KA+ +
Sbjct: 53 SLYVGELNTSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGEKAIEE 112
Query: 278 -NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
N S +G+ I +D SA+ SG
Sbjct: 113 LNYSPIEGRPCRIMWSQRDPSARRSG---------------------------------D 139
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
G IF++NL + L F +G + + D + ++K F V + E A A +
Sbjct: 140 GNIFIKNLHPAIDNKALHDTFSTFGKILSCKVATD-DMGQSKCFGFVHYETAEAAEAAIE 198
Query: 397 HLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLP 456
+++G + R + + GK IS++ ++ + ++A I VKN+
Sbjct: 199 NVNGMLLNDREVFV-------------GK---HISKKDRESKFEEIKANFTNI-YVKNID 241
Query: 457 YRTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLE 516
DLK LF P+G + + +L+K+ A+ + +
Sbjct: 242 LEYSEEDLKKLFTPYGAITSI------------YLEKD-AEGKSKGFGFVNY-------- 280
Query: 517 WAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEERE 576
EG A K + +KE N ++ G +KK EE +Q EN E+
Sbjct: 281 ---EGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQ-----YENTRL-EKLS 331
Query: 577 PEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYT 636
L+IKNL+ + + FK G I S V + K S G+GFV F +
Sbjct: 332 KYQGVNLFIKNLDDTIDSEKLEEEFKPFGTITSARVMVDETGK------SKGFGFVCFSS 385
Query: 637 RESLNQAL 644
E +A+
Sbjct: 386 PEEATKAI 393
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 98/200 (49%), Gaps = 20/200 (10%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
D ++IKNL+ ++ F G I S VA GQ S +GFV + T E+
Sbjct: 139 DGNIFIKNLHPAIDNKALHDTFSTFGKILSCKVATD----DMGQ--SKCFGFVHYETAEA 192
Query: 640 LNQALKVLQNSSLDEHQIELKR--SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
A++ + L++ ++ + + S ++ ES+ +K +N I V+NI +
Sbjct: 193 AEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEIKANFTN--------IYVKNIDLEY 244
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ ++++LF +G + + L K G +GFGFV + A +A++ L + G+
Sbjct: 245 SEEDLKKLFTPYGAITSIYLEKD--AEGKSKGFGFVNYEGHEAAVKAVEEL-NDKEINGQ 301
Query: 758 RLVLEWAEEA-DNVEDIRKR 776
++ + A++ + +E+++K+
Sbjct: 302 KIYVGRAQKKRERMEELKKQ 321
>gi|410896922|ref|XP_003961948.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Takifugu rubripes]
Length = 336
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 569 VEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
+E+ E REPE L+I L+F +TE+S+R HF+K G + V R+ P S G
Sbjct: 1 MEDRELREPEQLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMRE-----PACKRSRG 55
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSN--VAKQTGS 686
+GFV + +++A+K + +D +E KR+ V R+ SN A +
Sbjct: 56 FGFVTYSCLREVDEAMKA-RPHKVDGRVVEPKRA----------VSREDSNKPGAHLSVK 104
Query: 687 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 735
KI V I ++ ++ + F+ +G+++ V + ++ SG RGF FV F
Sbjct: 105 KIFVGGIKEDTEEDQIRDYFEKYGKIECVDIMEERS-SGKKRGFCFVTF 152
>gi|156373168|ref|XP_001629405.1| predicted protein [Nematostella vectensis]
gi|156216405|gb|EDO37342.1| predicted protein [Nematostella vectensis]
Length = 817
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 24/201 (11%)
Query: 563 PEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPG 622
P ++ E EE +P ++I NL F+ TED +R F K G + V + + +S G
Sbjct: 584 PAAKKPCGESEEESSDP-RKVFISNLLFSITEDHLRDKFSKLGEVLDVRIVKNMAGRSKG 642
Query: 623 QFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAK 682
Y +V+F ++ AL ++D ++E R + K K+ K
Sbjct: 643 ------YAYVEFNNESTVQAAL------AMDREKME----GRPMFISPCVDKAKNPTTFK 686
Query: 683 QTGS----KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 738
S + V N+PF AK+SE+EELF G +K VRL G +G+G+VE+ +
Sbjct: 687 FPTSLDKHTLFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKP--KGYGYVEYEQE 744
Query: 739 NEAKRAMKALCQSTHLYGRRL 759
+ A A+ L T + GR +
Sbjct: 745 SSASTAVLTL-DKTEVKGRTI 764
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 300 YSGAA-DDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFE 358
YS A + + N ++ +++ +++ + E+ ++ ++F+ NL +++TED L F
Sbjct: 563 YSQAGMEGSQNQQIDKVRSSEPAAKKPCGESEEESSDPRKVFISNLLFSITEDHLRDKFS 622
Query: 359 KYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKEN 418
K G + +V + + ++KG+A V F E QA +D GR + + P
Sbjct: 623 KLGEVLDVRI-VKNMAGRSKGYAYVEF-NNESTVQAALAMDREKMEGRPMFISP------ 674
Query: 419 EGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVL 478
C+ + K + + K + V NLP+ ++++ LF G + +V
Sbjct: 675 ----------CVDKAKNPTTFKFPTSLDKHTLFVSNLPFDAKESEIEELFSKHGVVKQVR 724
Query: 479 V------PPYGITGLVEFLQKNQAKAAFNSLAYTKFK 509
+ P G G VE+ Q++ A A +L T+ K
Sbjct: 725 LVTNRAGKPKGY-GYVEYEQESSASTAVLTLDKTEVK 760
>gi|428200576|ref|YP_007079165.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427978008|gb|AFY75608.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 93
Score = 68.9 bits (167), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 53/83 (63%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IFV N+S+ ++DL ++F +YG + +V+LP+D+ET + +GFA V + QA + L
Sbjct: 3 IFVGNISHQAAKEDLEEIFAEYGIVKKVVLPLDRETGRMRGFAFVDLSSEDQEEQAIRDL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DGT +GR L + +P+E+ N
Sbjct: 63 DGTELMGRQLRVNKARPREDNPN 85
Score = 43.1 bits (100), Expect = 0.64, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V NI QA + ++EE+F +G +K V LP +G RGF FV+ ++++ ++A++
Sbjct: 3 IFVGNISHQAAKEDLEEIFAEYGIVKKVVLPLDR-ETGRMRGFAFVDLSSEDQEEQAIRD 61
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRKRTNRY 780
L T L GR+L + A ++ + RY
Sbjct: 62 L-DGTELMGRQLRVNKARPREDNPNRGSYRTRY 93
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L++ NL++N E ++ F++ G ++ V + ++D S G+G+V++ +
Sbjct: 197 LFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERD-----TGRSRGFGYVEYTNAVDAAK 251
Query: 643 ALKVLQNSSLDEHQIEL--------KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIP 694
A + +++ +D +I L R + A R + A + V NIP
Sbjct: 252 AFEAKRDTEIDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQASPESDTLFVGNIP 311
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHL 754
F A + + E+F G + +RLP SG +GFG+V+F + EA+ A L +
Sbjct: 312 FSANEDSLHEVFGQKGSILGIRLPTDPE-SGRPKGFGYVQFSSVEEAREAFNEL-NGAEI 369
Query: 755 YGRRLVLEWA 764
GR + L+++
Sbjct: 370 DGRPVRLDFS 379
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 17/193 (8%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S +FV NLS+ V E L FE++G L+ V + +++T +++GF V + A +A+
Sbjct: 194 SANLFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF 253
Query: 396 QHLDGTVFLGRMLHL--IPGKPKENE-GNVDGKVHCCISERKLDAFNQVVEARSKRIILV 452
+ T GR ++L G+P E G + + +F S + V
Sbjct: 254 EAKRDTEIDGRKINLDYATGRPANREQGGFQDRAQA-----RARSFGDQASPESD-TLFV 307
Query: 453 KNLPYRTLPTDLKALFEPFGDLGRVLVP-------PYGITGLVEFLQKNQAKAAFNSLAY 505
N+P+ L +F G + + +P P G G V+F +A+ AFN L
Sbjct: 308 GNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGF-GYVQFSSVEEAREAFNELNG 366
Query: 506 TKFKEVPLYLEWA 518
+ P+ L+++
Sbjct: 367 AEIDGRPVRLDFS 379
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
ES +FV N+ ++ ED L ++F + G + + LP D E+ + KGF V F E A +A
Sbjct: 301 ESDTLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREA 360
Query: 395 YQHLDGTVFLGRMLHLIPGKPKEN 418
+ L+G GR + L P+ N
Sbjct: 361 FNELNGAEIDGRPVRLDFSTPRAN 384
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 678 SNVAKQT---------GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 728
S K+T + + V N+ + ++ ++ F+ FGEL VR+ + +G R
Sbjct: 178 SATPKKTKTEEPAAGASANLFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTER-DTGRSR 236
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
GFG+VE+ +A +A +A + T + GR++ L++A
Sbjct: 237 GFGYVEYTNAVDAAKAFEA-KRDTEIDGRKINLDYA 271
>gi|862465|dbj|BAA04177.1| ss-DNA binding protein 12RNP2 precursor [Synechococcus elongatus
PCC 6301]
Length = 100
Score = 68.9 bits (167), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLS+ TE+D+ ++F +YGP++ V LP+D+ET + +GFA + H A L
Sbjct: 3 IYVGNLSFRATEEDVREVFAEYGPVSRVSLPVDRETGRLRGFAFIEMEEDAHEDAAISEL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG + GR L + +PK++
Sbjct: 63 DGAEWFGRQLRVSKARPKDD 82
>gi|432091266|gb|ELK24470.1| RNA-binding protein 28 [Myotis davidii]
Length = 762
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 24/200 (12%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
TL++ L ++ + + F + GP+ V +K K+ G+G+V F RE +
Sbjct: 5 TLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKA-----CRGFGYVTFSMREDVQ 59
Query: 642 QALKVLQNSSLDEHQIELKRS-------------NRNLESEATTVKRKSSNVAKQTGSKI 688
+ALK + ++ + +I + + N N ES K K + VA + +++
Sbjct: 60 RALKEI--TTFEGCKINVSVAKKKLKNKSKEKGGNENSESPKKEQKPKRAKVADKK-ARL 116
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
++RN+ F+ + +++ +F +G + V +P+K G RGF FV+F EA +A+K++
Sbjct: 117 IIRNLSFKCSEDDLKTIFAQYGAVLEVNIPRKP--DGKMRGFAFVQFKNLLEAGKALKSM 174
Query: 749 CQSTHLYGRRLVLEWAEEAD 768
+ GR + ++WA D
Sbjct: 175 -NMKEIKGRTVAVDWAVAKD 193
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 23/195 (11%)
Query: 226 TIVVKNLPAGVKKKDLKAYFKPLPLASVRTTFL----------GMAYIGFKDEKNCNKAL 275
T+ V LP + + L+ F + V+ F+ G Y+ F ++ +AL
Sbjct: 5 TLFVGRLPPSARSEQLEELFSQV--GPVKQCFVVTEKGSKACRGFGYVTFSMREDVQRAL 62
Query: 276 NKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAE 335
+ +F +G ++N+ K K + N+ S + +E + A+ +
Sbjct: 63 KEITTF-EGCKINVSVAKKKLKNKSKEKGGNENSESPK---------KEQKPKRAKVADK 112
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
R+ +RNLS+ +EDDL +F +YG + EV +P K K +GFA V F A +A
Sbjct: 113 KARLIIRNLSFKCSEDDLKTIFAQYGAVLEVNIP-RKPDGKMRGFAFVQFKNLLEAGKAL 171
Query: 396 QHLDGTVFLGRMLHL 410
+ ++ GR + +
Sbjct: 172 KSMNMKEIKGRTVAV 186
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 295 DNSAKYSGAADDNNNASMENIKAK--HWKSQED-SVQFAE--------DIAESGRIFVRN 343
D+S + SG D ++ S E++ H + QED VQ ++ D+ E +F+RN
Sbjct: 285 DHSDEDSGLEDGDSVDSGEDLAQSDTHTEEQEDEDVQVSKKKKRKLPSDVNEGKTVFIRN 344
Query: 344 LSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
LS+ E++L +L +++G L V + + +T+ +KG A F+ E A +
Sbjct: 345 LSFDSEEEELGELLQQFGDLKYVCIVLHPDTEHSKGCAFAQFMTQEAAQKC 395
>gi|223590120|sp|A5DM21.2|PABP_PICGU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|190347872|gb|EDK40224.2| hypothetical protein PGUG_04322 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 180/440 (40%), Gaps = 88/440 (20%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V L+ +V E L ++F G ++ + + D T K+ G+A V F ++H
Sbjct: 60 LYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNF---------HKHA 110
Query: 399 DGTVFLGRMLH-LIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPY 457
DG+ + + + L+ G+P C I + D + I +KNL
Sbjct: 111 DGSRAIEELNYSLVDGRP------------CRIMWSQRDP---SLRRNGDGNIFIKNL-- 153
Query: 458 RTLPTDLKALFEPFGDLGRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEW 517
D KAL + F GR+ ++ V + Q+K F + Y + +E
Sbjct: 154 -HPAIDNKALHDTFSAFGRI------LSCKVATDELGQSKC-FGFVHYETAEAAEAAIEN 205
Query: 518 APEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREP 577
G+ +E GK K + E + EE K N
Sbjct: 206 V-NGMLLNDREVFVGKHVSKRDRESKF--EEMKANF------------------------ 238
Query: 578 EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTR 637
T +Y+KNL FK GP+ SV + ++ KS G+GFV F
Sbjct: 239 ---TNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKS------RGFGFVNFENH 289
Query: 638 ESLNQALKVLQNSSLDEHQIELKRSNRNLES--------EATTVKRKSSNVAKQTGSKIL 689
ES A+K + + +D ++ + R+ + E E+T +++ ++K G +
Sbjct: 290 ESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEK----LSKYQGVNLF 345
Query: 690 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFGFVEFITKNEAKRAMKAL 748
V+N+ ++EE FK FG + R+ MV +G +GFGFV F + EA +A+ +
Sbjct: 346 VKNLDDSIDSEKLEEEFKPFGTITSARV---MVDDAGKSKGFGFVCFSSPEEATKAITEM 402
Query: 749 CQSTHLYGRRLVLEWAEEAD 768
Q + G+ L + A+ D
Sbjct: 403 NQRM-IQGKPLYVALAQRKD 421
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 13/207 (6%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
KH ++ +F E A ++V+NL+ V ++F+ +GP+ V L D+E K
Sbjct: 219 GKHVSKRDRESKFEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQE-GK 277
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
++GF V F E A A + ++ G+ L++ + K + +++ KL
Sbjct: 278 SRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLS 337
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFL 491
+ V + VKNL L+ F+PFG + RV+V G + G V F
Sbjct: 338 KYQGVN-------LFVKNLDDSIDSEKLEEEFKPFGTITSARVMVDDAGKSKGFGFVCFS 390
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWA 518
+A A + + PLY+ A
Sbjct: 391 SPEEATKAITEMNQRMIQGKPLYVALA 417
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 221 KRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVR--TTFLGMAY-IGFKDEKNCNKALN 276
K + + VKNL V + FKP P+ SV T G + GF + +N ALN
Sbjct: 235 KANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALN 294
Query: 277 KNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAES 336
K K++ D Y G A ++ +K + ++ + + + +
Sbjct: 295 AVKEM-NDKEI-------DGQKLYVGRAQKKRE-RLDELKRLYESTRLEKLSKYQGV--- 342
Query: 337 GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
+FV+NL ++ + L + F+ +G + + +D + K+KGF V F PE AT+A
Sbjct: 343 -NLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVD-DAGKSKGFGFVCFSSPEEATKAIT 400
Query: 397 HLDGTVFLGRMLHL 410
++ + G+ L++
Sbjct: 401 EMNQRMIQGKPLYV 414
>gi|434406111|ref|YP_007148996.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
gi|428260366|gb|AFZ26316.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
Length = 94
Score = 68.9 bits (167), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 49/87 (56%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY TE DL +F YG + V+LP D+ET + +GFA V + +A L
Sbjct: 3 IYVGNLSYQATEADLKSVFADYGEVKRVVLPTDRETGRLRGFAFVDMMEDSQEDKAITEL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGK 425
DG ++GR L + KP+E+ D +
Sbjct: 63 DGAEWMGRQLRVNKAKPREDNRRDDNR 89
Score = 41.2 bits (95), Expect = 2.2, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ +QA +++++ +F +GE+K V LP +G RGF FV+ + ++ +A+
Sbjct: 3 IYVGNLSYQATEADLKSVFADYGEVKRVVLPTDR-ETGRLRGFAFVDMMEDSQEDKAITE 61
Query: 748 LCQSTHLYGRRLVLEWAEEADNVEDIRKRTNR 779
L GR+L + +A ED R+ NR
Sbjct: 62 L-DGAEWMGRQLRV---NKAKPREDNRRDDNR 89
>gi|395856984|ref|XP_003800896.1| PREDICTED: polyadenylate-binding protein 5 [Otolemur garnettii]
Length = 382
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 156/418 (37%), Gaps = 80/418 (19%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
V +L VTED L K F GPL + D T G+ V F P A A ++
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 401 TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTL 460
+ G+ L+ +P + RK N I +KNL
Sbjct: 82 DLLNGKPFRLMWSQPDDRL-------------RKSGVGN----------IFIKNLDKSID 118
Query: 461 PTDLKALFEPFGDL--GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
L LF FG++ +V+ G K A F+SLA W
Sbjct: 119 NRALFYLFSAFGNILSCKVVCDDNG--------SKGYAYVHFDSLAAAN------RAIWH 164
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
GV ++ G+ K PE E E R+
Sbjct: 165 MNGVRLNNRQVYVGRFK--------------------------FPE--ERAAEVRTRDRA 196
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +++KNL + ++ ++ F + GP SV V R KS G+GFV++ T E
Sbjct: 197 TFTNVFVKNLGDDMDDEKLKELFSEYGPTESVKVIRDASGKSK------GFGFVRYETHE 250
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQ----TGSKILVRNIP 694
+ +A+ L S+D + + R+ + +E A +R K G I ++N+
Sbjct: 251 AAQKAVLDLHGKSIDGKILYVGRAQKKIERLAELRRRFERLRLKDKSRPPGVPIYIKNLD 310
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQST 752
+++E F FG + ++ M+ G +GFG V F + EA +A+ + T
Sbjct: 311 ETIDDEKLKEEFSPFGSISRAKV---MMEVGQGKGFGVVCFSSFEEAAKAVDEMNGRT 365
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D A +FV+NL + ++ L +LF +YGP E + I + K+KGF V + E A
Sbjct: 194 DRATFTNVFVKNLGDDMDDEKLKELFSEYGP-TESVKVIRDASGKSKGFGFVRYETHEAA 252
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A L G G++L++
Sbjct: 253 QKAVLDLHGKSIDGKILYV 271
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 26/175 (14%)
Query: 585 IKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ +L+ + TED + + F+ GP+ + R SP +GYG+V F AL
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTHSP-----LGYGYVNFRFPADAEWAL 76
Query: 645 KVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ L+ L + S+ RKS I ++N+ +
Sbjct: 77 NTMNFDLLNGKPFRL------MWSQPDDRLRKSGV------GNIFIKNLDKSIDNRALFY 124
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
LF AFG + ++ GS +G+ +V F + A RA+ H+ G RL
Sbjct: 125 LFSAFGNILSCKVVCDDNGS---KGYAYVHFDSLAAANRAI------WHMNGVRL 170
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 562 VPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSP 621
P V N+ E D T Y+ NL+ +E+ + F + GP+ +V V PK
Sbjct: 6 APGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYV-----PKDR 60
Query: 622 GQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVA 681
L GYGFV+F + E + A+K+L L I + +++++ +KS +V
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKILNMLKLYGKPIRVNKASQD---------KKSLDV- 110
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGEL----KFVRLPKKMVGSGLHRGFGFVEFIT 737
G+ + + N+ + + + + F AFG + K +R P+ +G RGFGFV + +
Sbjct: 111 ---GANLFIGNLDPEVDEKLLYDTFSAFGVIVTNPKIMRDPE----TGNSRGFGFVSYDS 163
Query: 738 KNEAKRAMKALCQSTHLYGRRLVLEWAEEAD 768
+ +A++A+ + HL R + + +A + D
Sbjct: 164 FESSDQAIEAM-NNQHLCNRPITVSYAYKKD 193
>gi|354466116|ref|XP_003495521.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
gi|344243583|gb|EGV99686.1| Polyadenylate-binding protein 4-like [Cricetulus griseus]
Length = 370
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 162/412 (39%), Gaps = 95/412 (23%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L VTED L + F GP+ + + D + ++ G+A V FL + A +A +
Sbjct: 12 LYVGDLHEDVTEDVLFRKFNTVGPVLSIRICRDLVSRRSLGYAYVNFLQLDDAQKALDTM 71
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI--ILVKNLP 456
+ LI GK + S+R DA+ R I + +KNL
Sbjct: 72 N--------FDLIQGKS----------IRLMWSQR--DAY-----LRKSGIGNVFIKNLD 106
Query: 457 YRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYTKFK 509
D K L+E F G++L G V + ++ A A + +
Sbjct: 107 K---SIDNKTLYEHFSPFGKILSSKVMSDEEGSRGYGFVHYQDQSAADRAIEEMNGKLLR 163
Query: 510 EVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENV 569
+ ++++ F K++ E E + T+E
Sbjct: 164 DCTVFVDR-----FKSRKDR----------------EAELRSKTSEF------------- 189
Query: 570 EEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGY 629
T +YIKNL N ++ ++ F K G SV V + + KS G+
Sbjct: 190 -----------TNVYIKNLGDNMDDEGLKNIFSKYGQTLSVKVMKDDNGKSK------GF 232
Query: 630 GFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTG 685
GFV FY E+ A++ + ++ I + R+ + +E +A ++ K + +
Sbjct: 233 GFVSFYNHEAARNAVEEMNGQDINGQTIFVGRAQKKVERQAELKEKFEQMKKERIRARQA 292
Query: 686 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 737
+K+ ++N+ + F +FG + V++ M +G +GFG + F +
Sbjct: 293 AKLYIKNLDETIDDETLRREFSSFGSICRVKV---MQEAGQSKGFGLICFFS 341
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ +L+ + TED + R F GP+ S+ + R + S+GY +V F +
Sbjct: 10 ASLYVGDLHEDVTEDVLFRKFNTVGPVLSIRICRDLVSRR-----SLGYAYVNFLQLDDA 64
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL + + I L S R+ + + K + ++N+
Sbjct: 65 QKALDTMNFDLIQGKSIRLMWSQRD------------AYLRKSGIGNVFIKNLDKSIDNK 112
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ E F FG++ ++ GS RG+GFV + ++ A RA++ +
Sbjct: 113 TLYEHFSPFGKILSSKVMSDEEGS---RGYGFVHYQDQSAADRAIEEM 157
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 108/276 (39%), Gaps = 54/276 (19%)
Query: 217 APVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL------PLASVRTTFLGMAYIGFKDEKN 270
A + K + +KNL + K L +F P + S G ++ ++D+
Sbjct: 90 AYLRKSGIGNVFIKNLDKSIDNKTLYEHFSPFGKILSSKVMSDEEGSRGYGFVHYQDQSA 149
Query: 271 CNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDS-VQF 329
++A+ + GK L +D + + +KS++D +
Sbjct: 150 ADRAIEE----MNGKLL------RDCT-----------------VFVDRFKSRKDREAEL 182
Query: 330 AEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPE 389
+E ++++NL + ++ L +F KYG V + D + K+KGF V+F E
Sbjct: 183 RSKTSEFTNVYIKNLGDNMDDEGLKNIFSKYGQTLSVKVMKD-DNGKSKGFGFVSFYNHE 241
Query: 390 HATQAYQHLDG------TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVE 443
A A + ++G T+F+GR K E + + K ER +
Sbjct: 242 AARNAVEEMNGQDINGQTIFVGR-----AQKKVERQAELKEKFEQMKKER--------IR 288
Query: 444 ARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLV 479
AR + +KNL L+ F FG + RV V
Sbjct: 289 ARQAAKLYIKNLDETIDDETLRREFSSFGSICRVKV 324
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ HF G I S V ++ S GYGFV + + + ++
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSPFGKILSSKVMSDEEG-------SRGYGFVHYQDQSAADR 152
Query: 643 ALKVLQNSSLDEHQIELKR--SNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
A++ + L + + + R S ++ E+E + + +NV ++N+
Sbjct: 153 AIEEMNGKLLRDCTVFVDRFKSRKDREAELRSKTSEFTNV--------YIKNLGDNMDDE 204
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
++ +F +G+ V++ K +G +GFGFV F A+ A++ +
Sbjct: 205 GLKNIFSKYGQTLSVKVMKD--DNGKSKGFGFVSFYNHEAARNAVEEM 250
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
++ +++++NL T+ ++ L + F +G + V + +E ++KGF L+ F PE A +A
Sbjct: 291 QAAKLYIKNLDETIDDETLRREFSSFGSICRV--KVMQEAGQSKGFGLICFFSPEAAAKA 348
Query: 395 YQHLDGTVFLGRMLHLIPGK 414
++G + + L++ G+
Sbjct: 349 MAEMNGRILGSKALNIALGQ 368
>gi|427720688|ref|YP_007068682.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427353124|gb|AFY35848.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 99
Score = 68.9 bits (167), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT+D L+ +F +YG + V LP D++T + +GF V T A + L
Sbjct: 3 IYVGNLSYEVTQDGLSGVFAEYGSVKRVQLPTDRDTGRVRGFGFVEMGTDAEETAAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDG 424
DG ++GR L + KP+E+ + DG
Sbjct: 63 DGAEWMGRDLKVNKAKPREDRSSFDG 88
>gi|321475411|gb|EFX86374.1| hypothetical protein DAPPUDRAFT_98025 [Daphnia pulex]
Length = 335
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 19/156 (12%)
Query: 593 TEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSL 652
T++ IR F G + S + R K GQ S+GYGFV ++ E +A+ L L
Sbjct: 2 TQEEIRSLFASIGEVESCKLIRDKIT---GQ--SLGYGFVNYHRAEDAEKAINTLNGLRL 56
Query: 653 DEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGEL 712
I++ + R SS K G+ + V IP QSE+E LF FG +
Sbjct: 57 QNKTIKV------------SFARPSSENIK--GANLYVSGIPKTMCQSELETLFAPFGRI 102
Query: 713 KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
R+ + +GL +G GF+ F T+ EA+RA++ L
Sbjct: 103 ITSRILCDSITAGLSKGVGFIRFDTRGEAERAIEKL 138
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
IFV NL+ E L +LF +G + V + D +T+K KGF VT + A A Q L
Sbjct: 249 IFVYNLAPDTEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEALVAIQSL 308
Query: 399 DGTVFLGRMLHL 410
+G R+L +
Sbjct: 309 NGYTLGNRVLQV 320
>gi|307179427|gb|EFN67751.1| RNA-binding protein 28 [Camponotus floridanus]
Length = 797
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 40/240 (16%)
Query: 223 QYHTIVVKNLPAGVKKKDLKAYFKPLP-------LASVRTTFLGMAYIGFKDEKNCNKAL 275
Q I+V+NLP V ++D+K ++KP L +G +I FK ++ +KA+
Sbjct: 39 QNSRIIVRNLPFKVTEEDIKKFYKPFGEITEINLLKRPDGNLVGCGFIRFKHMEDASKAI 98
Query: 276 -NKNKSFWKGKQLNIY----------KYSKD---------NSAKYSGAADDNNNASMENI 315
N NK + G+ ++ K KD N + S A N + NI
Sbjct: 99 FNTNKKEFLGRTISCNWAISKSKFREKLEKDLSGNQEVDKNEKQLSQDAQKEENEN--NI 156
Query: 316 KAKHWKSQEDSVQFAEDIAES--------GRIFVRNLSYTVTEDDLTKLFEKYGPLAEVI 367
+ K + ++D++ + RI +RNLS+ TED+L + F +YG + E+
Sbjct: 157 QKKKFTKEKDNLNKLKKRKLQKMKKQKKRARIVIRNLSFQATEDNLKEFFSQYGEIDEIK 216
Query: 368 LPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE--NEGNVDGK 425
+ + K K G A V F + ++A +A H + L R + + PK +E NVD K
Sbjct: 217 I-LTKPDGKQTGVAFVQFNVVQNAAKAIHHANMQSLLNRPMIVDWAVPKNKFSENNVDVK 275
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 133/298 (44%), Gaps = 62/298 (20%)
Query: 334 AESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQ 393
++ RI VRNL + VTE+D+ K ++ +G + E+ L + + G + F E A++
Sbjct: 38 GQNSRIIVRNLPFKVTEEDIKKFYKPFGEITEINL-LKRPDGNLVGCGFIRFKHMEDASK 96
Query: 394 AYQHLDGTVFLGRMLHL----------------IPG---------------KPKENEGNV 422
A + + FLGR + + G + +ENE N+
Sbjct: 97 AIFNTNKKEFLGRTISCNWAISKSKFREKLEKDLSGNQEVDKNEKQLSQDAQKEENENNI 156
Query: 423 DGKVHCCISERKLDAFNQVVEARSKRI--------ILVKNLPYRTLPTDLKALFEPFGDL 474
K ++ D N++ + + +++ I+++NL ++ +LK F +G++
Sbjct: 157 QKKKFT----KEKDNLNKLKKRKLQKMKKQKKRARIVIRNLSFQATEDNLKEFFSQYGEI 212
Query: 475 G--RVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEV---PLYLEWA-PEGVFAEAKE 528
++L P G V F+Q N + A ++ + + + P+ ++WA P+ F+E
Sbjct: 213 DEIKILTKPDGKQTGVAFVQFNVVQNAAKAIHHANMQSLLNRPMIVDWAVPKNKFSENNV 272
Query: 529 KSKGKEKEKNEEEG-----------EEGEEEKKENTAEEDNQQ-GVPEVEENVEEDEE 574
K + K ++ +E + E+E E AE +++ + ++E++E +EE
Sbjct: 273 DVKPEIKTESTDENKVHDTSEITVIDNSEDENSEVDAESNSKDVSMKSIQEDIESEEE 330
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 450 ILVKNLPYRTLPTDLKALFEPFGDLGRV--LVPPYGI---TGLVEFLQKNQAKAAFNSLA 504
I+V+NLP++ D+K ++PFG++ + L P G G + F A A +
Sbjct: 43 IIVRNLPFKVTEEDIKKFYKPFGEITEINLLKRPDGNLVGCGFIRFKHMEDASKAIFNTN 102
Query: 505 YTKFKEVPLYLEWA-PEGVFAEAKEK--SKGKEKEKNEEE-GEEGEEEKKEN-------T 553
+F + WA + F E EK S +E +KNE++ ++ ++E+ EN T
Sbjct: 103 KKEFLGRTISCNWAISKSKFREKLEKDLSGNQEVDKNEKQLSQDAQKEENENNIQKKKFT 162
Query: 554 AEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVA 613
E+DN + + + + +++ + I+NL+F +TED+++ F + G I + +
Sbjct: 163 KEKDNLNKLKKRKLQKMKKQKKRAR----IVIRNLSFQATEDNLKEFFSQYGEIDEIKIL 218
Query: 614 RKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
K D K G FVQF ++ +A+
Sbjct: 219 TKPDGKQT------GVAFVQFNVVQNAAKAI 243
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 57/232 (24%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
++ + ++NL F TE+ I++ +K G I + + ++ D G + G GF++F E
Sbjct: 40 NSRIIVRNLPFKVTEEDIKKFYKPFGEITEINLLKRPD----GNLV--GCGFIRFKHMED 93
Query: 640 LNQAL------------------------------KVLQNSSLDEHQIELKRSNRNLESE 669
++A+ + N +D+++ +L + + E+E
Sbjct: 94 ASKAIFNTNKKEFLGRTISCNWAISKSKFREKLEKDLSGNQEVDKNEKQLSQDAQKEENE 153
Query: 670 ATTVKRK----------------SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELK 713
K+K ++ ++I++RN+ FQA + ++E F +GE+
Sbjct: 154 NNIQKKKFTKEKDNLNKLKKRKLQKMKKQKKRARIVIRNLSFQATEDNLKEFFSQYGEID 213
Query: 714 FVRLPKKMVGSGLHRGFGFVEF-ITKNEAKRAMKALCQSTHLYGRRLVLEWA 764
+++ K G G FV+F + +N AK A QS L R ++++WA
Sbjct: 214 EIKILTK--PDGKQTGVAFVQFNVVQNAAKAIHHANMQS--LLNRPMIVDWA 261
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
Q + D++E +F++N+ ++V D+L E++GP+ ++ ID T+ +KG A V F
Sbjct: 387 QISNDVSEGRTVFLKNVPFSVKNDELKSFMEQFGPIYYALVCIDPLTEYSKGTAFVKFRN 446
Query: 388 PEHATQA 394
E A +
Sbjct: 447 IEDAEKC 453
>gi|218246364|ref|YP_002371735.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257059410|ref|YP_003137298.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218166842|gb|ACK65579.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256589576|gb|ACV00463.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 92
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VTE DL +F +YG + V +P D++T + +GFA V A L
Sbjct: 3 IYVGNLSYEVTEADLNSVFAEYGSVKRVHVPTDRDTGRPRGFAFVEMGTDAQEATAIDTL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG ++GR L + +P+EN GN
Sbjct: 63 DGAEWMGRALTVNLARPRENSGN 85
>gi|428306262|ref|YP_007143087.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428247797|gb|AFZ13577.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 111
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VT++D+++ F +YG + V LP D+ET + +GFA V +A + L
Sbjct: 3 IYVGNLSYQVTQEDISQTFAEYGTVKRVQLPTDRETGRMRGFAFVEMETDAEEEKAIEAL 62
Query: 399 DGTVFLGRMLHLIPGKPKE 417
DG ++GR L + KP+E
Sbjct: 63 DGAEWMGRDLKVNKAKPRE 81
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ +Q Q ++ + F +G +K V+LP +G RGF FVE T E ++A++A
Sbjct: 3 IYVGNLSYQVTQEDISQTFAEYGTVKRVQLPTDR-ETGRMRGFAFVEMETDAEEEKAIEA 61
Query: 748 LCQSTHLYGRRL 759
L GR L
Sbjct: 62 L-DGAEWMGRDL 72
>gi|428773895|ref|YP_007165683.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
gi|428688174|gb|AFZ48034.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
Length = 90
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VTE+DL +F YG + V LP+D+ET + +GF V A + L
Sbjct: 3 IYVGNLSYDVTEEDLQTVFSDYGQVKRVYLPVDRETKRMRGFGFVEMSSDSEEETAIETL 62
Query: 399 DGTVFLGRMLHLIPGKPKENEGN 421
DG ++GR + + KP+E GN
Sbjct: 63 DGAQWMGRQMKVNKAKPREEGGN 85
>gi|396081064|gb|AFN82683.1| splicing factor CC1-like protein [Encephalitozoon romaleae SJ-2008]
Length = 273
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+F++ +SY +TE DL EK G +A V +P+ + + KGF V F E +A + L
Sbjct: 69 VFIKGISYDLTEYDLKSEMEKIGKVARVGIPMTNDYKRNKGFGYVEFCKEEDVKKALK-L 127
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
DGTVFLGR + + P+EN + + I + N+P+
Sbjct: 128 DGTVFLGREVVVNMAHPREN--------------------------KQRHTIYISNIPFG 161
Query: 459 TLPTDLKALFEPFGDLGRVLVP 480
LK FE G++ V P
Sbjct: 162 CDKRKLKKYFEEMGEVVGVSFP 183
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P T++IK ++++ TE ++ +K G +A V + D K + G+G+V+F E
Sbjct: 65 PSLTVFIKGISYDLTEYDLKSEMEKIGKVARVGIPMTNDYKR-----NKGFGYVEFCKEE 119
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+ +ALK+ L + + N + T I + NIPF
Sbjct: 120 DVKKALKLDGTVFLGREVV-------------VNMAHPRENKQRHT---IYISNIPFGCD 163
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA--LCQSTHLYG 756
+ ++++ F+ GE+ V P L +G+GF++F K + ++ +K + + + +Y
Sbjct: 164 KRKLKKYFEEMGEVVGVSFPYDKENDRL-KGYGFIDFGNKEDYEKVLKKKLVFEDSSIYQ 222
Query: 757 RRLVLEWAEEAD-NVEDIRKRTNRYFGTAVG 786
R + D N + R+ +R+ G G
Sbjct: 223 RPAYKNKEDRKDFNGKGPRRNDSRWNGKKYG 253
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 25/172 (14%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
D TLYI NL+ +D + F +CGP+ +V+V R K + GYGFV+F
Sbjct: 28 DATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGN-----HQGYGFVEFRNEVD 82
Query: 640 LNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQ 699
+ ALK++ L + L +S ++ R++ +V G+ + + N+ +
Sbjct: 83 ADYALKLMNMVKLYGKALRLNKSAQD---------RRNFDV----GANVFLGNLDPDVDE 129
Query: 700 SEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + K +R P+ +GL RGFGFV F T + A+ A+
Sbjct: 130 KTIYDTFSAFGNIISAKIMRDPE----TGLSRGFGFVSFDTFEASDAALAAM 177
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 158/427 (37%), Gaps = 103/427 (24%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V +L TE L + F GP+ + + D T ++ G+A V F P A +A +
Sbjct: 13 LYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 399 DGTVFLGRMLHLI-----PGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVK 453
+ V G+ + ++ P K GN I +K
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGN----------------------------IFIK 104
Query: 454 NLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-------GLVEFLQKNQAKAAFNSLAYT 506
NL D KAL++ F G +L G V F + A+ A +
Sbjct: 105 NL---DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKM--- 158
Query: 507 KFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVE 566
G+ ++ G+ K + E E E G K+
Sbjct: 159 -------------NGMLLNDRKVFVGRFKSRKEREAELGARAKE---------------- 189
Query: 567 ENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLS 626
T +YIKN + ++ ++ F K GP SV V + K S
Sbjct: 190 -------------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK------S 230
Query: 627 MGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR-----KSSNVA 681
G+GFV F E +A+ + L+ QI + R+ + +E + T +KR K +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRIT 289
Query: 682 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 741
+ G + V+N+ + + F FG + ++ M+ G +GFGFV F + EA
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV---MMEGGRSKGFGFVCFSSPEEA 346
Query: 742 KRAMKAL 748
+A+ +
Sbjct: 347 TKAVTEM 353
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ +L+ ++TE + F GPI S+ V R + S+GY +V F
Sbjct: 9 PMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRR-----SLGYAYVNFQQPA 63
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL + + + + S R+ ++ K I ++N+
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRD------------PSLRKSGVGNIFIKNLDKSID 111
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ GS +G+GFV F T+ A+RA++ +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGS---KGYGFVHFETQEAAERAIEKM 158
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V ++ S GYGFV F T+E+ +
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-------SKGYGFVHFETQEAAER 153
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A++ + L++ ++ + R E EA R AK+ + + ++N +
Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR-----AKEF-TNVYIKNFGEDMDDERL 207
Query: 703 EELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVL 761
++LF FG V++ M SG +GFGFV F +A++A+ + L G+++ +
Sbjct: 208 KDLFGKFGPALSVKV---MTDESGKSKGFGFVSFERHEDAQKAVDEM-NGKELNGKQIYV 263
Query: 762 EWAEE 766
A++
Sbjct: 264 GRAQK 268
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 144/392 (36%), Gaps = 105/392 (26%)
Query: 206 PSDPSVPPVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTT-------F 257
PS PS P S + V +L + L F P P+ S+R
Sbjct: 3 PSAPSYPMAS-----------LYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRS 51
Query: 258 LGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAAD---DNNNASME 313
LG AY+ F+ + +AL+ N KGK + I +D S + SG + N + S++
Sbjct: 52 LGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID 111
Query: 314 N-------------IKAK--------------HWKSQEDSVQFAEDI------------- 333
N + K H+++QE + + E +
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG 171
Query: 334 ---------AESG-------RIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKT 377
AE G ++++N + ++ L LF K+GP V + D E+ K+
Sbjct: 172 RFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKS 230
Query: 378 KGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
KGF V+F E A +A ++G G+ +++ G KV ER+ +
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------GRAQKKV-----ERQTEL 276
Query: 438 ---FNQVVEARSKRI----ILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT----G 486
F Q+ + R R + VKNL L+ F PFG + V G G
Sbjct: 277 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFG 336
Query: 487 LVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
V F +A A + PLY+ A
Sbjct: 337 FVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 259 GMAYIGFKDEKNCNKALNKNKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAK 318
G ++ F+ ++ KA+++ GK+LN Y G A E +K K
Sbjct: 232 GFGFVSFERHEDAQKAVDE----MNGKELN-------GKQIYVGRAQKKVERQTE-LKRK 279
Query: 319 HWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDK 376
+ ++D + + + ++V+NL + ++ L K F +G + A+V++ E +
Sbjct: 280 FEQMKQDRITRYQGV----NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM----EGGR 331
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKE 417
+KGF V F PE AT+A ++G + + L++ + KE
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
>gi|409993905|ref|ZP_11277031.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|291569285|dbj|BAI91557.1| RNA-binding protein [Arthrospira platensis NIES-39]
gi|409935253|gb|EKN76791.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 103
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 46/80 (57%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I+V NLSY VTEDDLT +F +YG + V LP D+ET + +GF V A L
Sbjct: 3 IYVGNLSYEVTEDDLTAVFAEYGSVKRVKLPTDRETGRMRGFGFVEMDTEAEEQSAIDAL 62
Query: 399 DGTVFLGRMLHLIPGKPKEN 418
DG + GR L + KP+EN
Sbjct: 63 DGAEWCGRDLRVNKAKPREN 82
Score = 41.2 bits (95), Expect = 2.2, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 688 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKA 747
I V N+ ++ + ++ +F +G +K V+LP +G RGFGFVE T+ E + A+ A
Sbjct: 3 IYVGNLSYEVTEDDLTAVFAEYGSVKRVKLPTDR-ETGRMRGFGFVEMDTEAEEQSAIDA 61
Query: 748 LCQSTHLYGRRLVLEWAEEADN 769
L GR L + A+ +N
Sbjct: 62 L-DGAEWCGRDLRVNKAKPREN 82
>gi|354499752|ref|XP_003511970.1| PREDICTED: polyadenylate-binding protein 5-like [Cricetulus
griseus]
gi|344240775|gb|EGV96878.1| Polyadenylate-binding protein 5 [Cricetulus griseus]
Length = 382
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 157/411 (38%), Gaps = 80/411 (19%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
V +L VTED L K F GPL + D T G+ V F P A A ++
Sbjct: 22 VGDLGPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 401 TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTL 460
+ G+ L+ +P + RK N I +K+L
Sbjct: 82 DLINGKPFRLMWSQPDDRL-------------RKSGVGN----------IFIKHLDKSID 118
Query: 461 PTDLKALFEPFGDL--GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
L LF FG++ +V+ G K A F+SLA W
Sbjct: 119 NRTLFYLFSAFGNILSCKVVCDDNG--------SKGYAYVHFDSLAAAN------RAIWH 164
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
GV+ ++ G+ K PE E E R+
Sbjct: 165 MNGVWLNNRQVYVGRFK--------------------------FPE--ERAAEVRTRDRA 196
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +++KNL N ++ ++ F + GP SV V R KS G+GFV++ T E
Sbjct: 197 TFTNVFVKNLGDNMDDEKLKELFSEYGPTESVKVIRDASGKSK------GFGFVRYETHE 250
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIP 694
+ +++ L ++D + + R+ + +E A +R K ++ G I ++N+
Sbjct: 251 AAQKSVLDLHGKTIDGKVLYVGRAQKKIERLAELRRRFERLKLKEKSRPPGVPIYIKNLD 310
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+++E F +FG + ++ +M G +GF V F + EA +A+
Sbjct: 311 ETIDDEKLKEEFSSFGSISRAKVMMEM---GQGKGFAVVCFSSFEEATKAV 358
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 16/229 (6%)
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
NT D G P + D+ ++IK+L+ + ++ F G I S
Sbjct: 77 NTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKHLDKSIDNRTLFYLFSAFGNILSCK 136
Query: 612 VARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEAT 671
V + S GY +V F + + N+A+ + L+ Q+ + R + E A
Sbjct: 137 VVCDDNG-------SKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYVGRF-KFPEERAA 188
Query: 672 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 731
V+ + + T + + V+N+ +++ELF +G + V++ + SG +GFG
Sbjct: 189 EVRTRD----RATFTNVFVKNLGDNMDDEKLKELFSEYGPTESVKVIRD--ASGKSKGFG 242
Query: 732 FVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAE-EADNVEDIRKRTNR 779
FV + T A++++ L T + G+ L + A+ + + + ++R+R R
Sbjct: 243 FVRYETHEAAQKSVLDLHGKT-IDGKVLYVGRAQKKIERLAELRRRFER 290
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D A +FV+NL + ++ L +LF +YGP E + I + K+KGF V + E A
Sbjct: 194 DRATFTNVFVKNLGDNMDDEKLKELFSEYGP-TESVKVIRDASGKSKGFGFVRYETHEAA 252
Query: 392 TQAYQHLDGTVFLGRMLHL 410
++ L G G++L++
Sbjct: 253 QKSVLDLHGKTIDGKVLYV 271
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 24/200 (12%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ ++ F G + S VA + +S GYGFV + T E+
Sbjct: 134 IFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRS------KGYGFVHYETAEAAET 187
Query: 643 ALKVLQNSSLDE------HQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
A+K + L++ H I K S+R +S+ +K + +N I V+N+ +
Sbjct: 188 AIKAVNGMLLNDKKVYVGHHISRKASSRERQSKLEEMKAQFTN--------IYVKNLDPE 239
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
Q + +LF+ FG + + + G RGFGFV F T EA++A++ L S + +G
Sbjct: 240 VTQDDFVKLFEQFGNVTSAVI--QTDEQGQSRGFGFVNFETHEEAQKAVETLHDSEY-HG 296
Query: 757 RRLVLEWAE-EADNVEDIRK 775
R+L + A+ +A+ E++RK
Sbjct: 297 RKLFVSRAQKKAEREEELRK 316
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T +Y+KNL+ T+D + F++ G + S + + Q S G+GFV F T E
Sbjct: 229 TNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDE------QGQSRGFGFVNFETHEEA 282
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQ 696
+A++ L +S ++ + R+ + E E K K ++K G + ++N+
Sbjct: 283 QKAVETLHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKYQGVNLYIKNLEDD 342
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F+ FG + ++ + G+ +GFGFV F + +EA +A+ +
Sbjct: 343 IDDERLRQEFEPFGSITSAKVMRDEKGT--SKGFGFVCFSSPDEATKAVAEM 392
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
++ S+E + E A+ I+V+NL VT+DD KLFE++G + ++ D E +
Sbjct: 209 SRKASSRERQSKLEEMKAQFTNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTD-EQGQ 267
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
++GF V F E A +A + L + + GR L + + K K + K+
Sbjct: 268 SRGFGFVNFETHEEAQKAVETLHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMS 327
Query: 437 AFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVPPYGIT---GLVEFL 491
+ V + +KNL L+ FEPFG + +V+ G + G V F
Sbjct: 328 KYQGVN-------LYIKNLEDDIDDERLRQEFEPFGSITSAKVMRDEKGTSKGFGFVCFS 380
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWA 518
++A A + PLY+ A
Sbjct: 381 SPDEATKAVAEMNNKMIGSKPLYVSLA 407
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
P +LY+ L+ TE + F GP+AS+ V R + S+GY +V +
Sbjct: 42 PSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRR-----SLGYAYVNYLNAA 96
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
+AL+ L S + R+ R + S+ RK+ I ++N+ Q
Sbjct: 97 DGERALEQLNYSLIK------GRACRIMWSQRDPALRKTGQ------GNIFIKNLDEQID 144
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + ++ G +G+GFV + T A+ A+KA+
Sbjct: 145 NKALHDTFAAFGNVLSCKVATDE--HGRSKGYGFVHYETAEAAETAIKAV 192
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 161/435 (37%), Gaps = 113/435 (25%)
Query: 249 PLASVRTT-------FLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKY 300
P+AS+R LG AY+ + + + +AL + N S KG+ I +D + +
Sbjct: 69 PVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLIKGRACRIMWSQRDPALRK 128
Query: 301 SGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
+G G IF++NL + L F +
Sbjct: 129 TG---------------------------------QGNIFIKNLDEQIDNKALHDTFAAF 155
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGT------VFLGRMLHLIPGK 414
G + + D E ++KG+ V + E A A + ++G V++G H I K
Sbjct: 156 GNVLSCKVATD-EHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVG---HHISRK 211
Query: 415 PKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL 474
E + E K N I VKNL D LFE FG++
Sbjct: 212 ASSRE------RQSKLEEMKAQFTN----------IYVKNLDPEVTQDDFVKLFEQFGNV 255
Query: 475 GRVLVPP--YGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEK 529
++ G + G V F +A+ A +L +++ L++
Sbjct: 256 TSAVIQTDEQGQSRGFGFVNFETHEEAQKAVETLHDSEYHGRKLFV-------------- 301
Query: 530 SKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLN 589
S+ ++K + EEE + E+ K + QGV LYIKNL
Sbjct: 302 SRAQKKAEREEELRKSYEQAK--VEKMSKYQGV-------------------NLYIKNLE 340
Query: 590 FNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQN 649
+ ++ +R+ F+ G I S V R + + S G+GFV F + + +A+ + N
Sbjct: 341 DDIDDERLRQEFEPFGSITSAKVMRDE------KGTSKGFGFVCFSSPDEATKAVAEMNN 394
Query: 650 SSLDEHQIELKRSNR 664
+ + + + R
Sbjct: 395 KMIGSKPLYVSLAQR 409
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
I S ++V L TVTE L ++F GP+A + + D T ++ G+A V +L
Sbjct: 40 ITPSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGE 99
Query: 393 QAYQHLDGTVFLGRMLHLI-----PGKPKENEGNV 422
+A + L+ ++ GR ++ P K +GN+
Sbjct: 100 RALEQLNYSLIKGRACRIMWSQRDPALRKTGQGNI 134
>gi|307202215|gb|EFN81702.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Harpegnathos saltator]
Length = 907
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 91/177 (51%), Gaps = 13/177 (7%)
Query: 569 VEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMG 628
++ D ++E + + T+++ NL++ +TE+ +R K GPI + + +S G
Sbjct: 644 IDADNQKEVDNNITVFVSNLDYTATEEEVRDALKLAGPITLFKMIKDYRGRSK------G 697
Query: 629 YGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKI 688
Y +VQ E++ ALK + ++ + + R + N + + K SS + K +K+
Sbjct: 698 YCYVQLSNAEAVEIALK-MDRIAIRGRPMFVSRCDPNKNTRRSGFKY-SSTLEK---NKL 752
Query: 689 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
V+ +P + E+EE+FK +G LK VRL +G +G +VE+ + A +A+
Sbjct: 753 FVKGLPITTTKEELEEIFKIYGALKEVRLV--TYRNGHSKGLAYVEYCDEATAAKAL 807
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 335 ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQA 394
E ++FV+ L T T+++L ++F+ YG L EV L + +KG A V + A +A
Sbjct: 748 EKNKLFVKGLPITTTKEELEEIFKIYGALKEVRL-VTYRNGHSKGLAYVEYCDEATAAKA 806
Query: 395 YQHLDGTVFLGRMLHLIPGKP 415
+DG G+++ + +P
Sbjct: 807 LLGIDGMKIHGKVISVAISQP 827
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 17/144 (11%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
+FV NL YT TE+++ + GP+ + I ++KG+ V E A + +
Sbjct: 658 VFVSNLDYTATEEEVRDALKLAGPIT-LFKMIKDYRGRSKGYCYVQLSNAE-AVEIALKM 715
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYR 458
D GR + + P +N K + + KL VK LP
Sbjct: 716 DRIAIRGRPMFVSRCDPNKNTRRSGFKYSSTLEKNKL---------------FVKGLPIT 760
Query: 459 TLPTDLKALFEPFGDLGRVLVPPY 482
T +L+ +F+ +G L V + Y
Sbjct: 761 TTKEELEEIFKIYGALKEVRLVTY 784
>gi|320586970|gb|EFW99633.1| nucleic acid-binding protein [Grosmannia clavigera kw1407]
Length = 314
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
+YI+N+ F+++E ++ F+ GP++ +AR + LS G+ FV F T E++ +
Sbjct: 121 IYIRNVVFDASEQHLKEAFEHYGPVSKAVIARD------ARGLSRGFAFVWFNTAEAMAK 174
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
ALK S +I ++ R EA + +S + T + V N+P++ +++
Sbjct: 175 ALKEADGSFWHGRRIIVQ--ERTARREAGSPSAATSTRSPTT--SLYVGNLPYETTDADL 230
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLE 762
+LF +K VR+ +G RGF +F T ++A +A + L T + R+L ++
Sbjct: 231 NQLFVGLEGVKSVRVAVDR-STGWPRGFAHTDFETVDQATKAFEHLAGRT-VGTRQLRID 288
Query: 763 WA 764
+A
Sbjct: 289 YA 290
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 24/187 (12%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
I++RN+ + +E L + FE YGP+++ ++ D ++GFA V F E +A +
Sbjct: 121 IYIRNVVFDASEQHLKEAFEHYGPVSKAVIARDAR-GLSRGFAFVWFNTAEAMAKALKEA 179
Query: 399 DGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIIL-VKNLPY 457
DG+ + GR + V + R+ + + RS L V NLPY
Sbjct: 180 DGSFWHGRRI----------------IVQERTARREAGSPSAATSTRSPTTSLYVGNLPY 223
Query: 458 RTLPTDLKALFEPFGDLGRVLVPPYGITGL------VEFLQKNQAKAAFNSLAYTKFKEV 511
T DL LF + V V TG +F +QA AF LA
Sbjct: 224 ETTDADLNQLFVGLEGVKSVRVAVDRSTGWPRGFAHTDFETVDQATKAFEHLAGRTVGTR 283
Query: 512 PLYLEWA 518
L +++A
Sbjct: 284 QLRIDYA 290
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 33/201 (16%)
Query: 227 IVVKNLPAGVKKKDLKAYFK---PLPLASV----RTTFLGMAYIGFKDEKNCNKALNK-N 278
I ++N+ ++ LK F+ P+ A + R G A++ F + KAL + +
Sbjct: 121 IYIRNVVFDASEQHLKEAFEHYGPVSKAVIARDARGLSRGFAFVWFNTAEAMAKALKEAD 180
Query: 279 KSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGR 338
SFW G+++ + + + A AA + +
Sbjct: 181 GSFWHGRRIIVQERTARREAGSPSAATSTRSPTTS------------------------- 215
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHL 398
++V NL Y T+ DL +LF + V + +D+ T +GFA F + AT+A++HL
Sbjct: 216 LYVGNLPYETTDADLNQLFVGLEGVKSVRVAVDRSTGWPRGFAHTDFETVDQATKAFEHL 275
Query: 399 DGTVFLGRMLHLIPGKPKENE 419
G R L + P ++
Sbjct: 276 AGRTVGTRQLRIDYANPSRDQ 296
>gi|397478151|ref|XP_003810419.1| PREDICTED: polyadenylate-binding protein 5-like [Pan paniscus]
Length = 382
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 156/411 (37%), Gaps = 80/411 (19%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
V +L VTED L K F GPL + D T G+ V F P A A ++
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 401 TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTL 460
+ G+ L+ +P + RK N I +KNL
Sbjct: 82 DLINGKPFRLMWSQPDDRL-------------RKSGVGN----------IFIKNLDKSID 118
Query: 461 PTDLKALFEPFGDL--GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
L LF FG++ +V+ G K A F+SLA W
Sbjct: 119 NRALFYLFSAFGNILSCKVVCDDNG--------SKGYAYVHFDSLAAAN------RAIWH 164
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
GV ++ G+ K PE E E R+
Sbjct: 165 MNGVRLNNRQVYVGRFK--------------------------FPE--ERAAEVRTRDRA 196
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +++KN+ + ++ ++ F + GP SV V R KS G+GFV++ T E
Sbjct: 197 TFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSK------GFGFVRYETHE 250
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT----GSKILVRNIP 694
+ +A+ L S+D + + R+ + +E A +R K+ G I ++N+
Sbjct: 251 AAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLD 310
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAM 745
+++E F +FG + ++ M+ G +GFG V F + EA +A+
Sbjct: 311 ETINDEKLKEEFSSFGSISRAKV---MMEVGQGKGFGVVCFSSFEEASKAV 358
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S V + S GY +V F + + N+
Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-------SKGYAYVHFDSLAAANR 160
Query: 643 ALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEV 702
A+ + L+ Q+ + R + E A V+ + + T + + V+NI ++
Sbjct: 161 AIWHMNGVRLNNRQVYVGRF-KFPEERAAEVRTRD----RATFTNVFVKNIGDDIDDEKL 215
Query: 703 EELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ELF +G + V++ + SG +GFGFV + T A++A+ L
Sbjct: 216 KELFCEYGPTESVKVIRD--ASGKSKGFGFVRYETHEAAQKAVLDL 259
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D A +FV+N+ + ++ L +LF +YGP E + I + K+KGF V + E A
Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGP-TESVKVIRDASGKSKGFGFVRYETHEAA 252
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A L G G++L++
Sbjct: 253 QKAVLDLHGKSIDGKVLYV 271
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 26/175 (14%)
Query: 585 IKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ +L+ + TED + + F+ GP+ + R +SP +GYG+V F AL
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSP-----LGYGYVNFRFPADAEWAL 76
Query: 645 KVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ ++ L + S+ RKS I ++N+ +
Sbjct: 77 NTMNFDLINGKPFRL------MWSQPDDRLRKSGV------GNIFIKNLDKSIDNRALFY 124
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
LF AFG + ++ GS +G+ +V F + A RA+ H+ G RL
Sbjct: 125 LFSAFGNILSCKVVCDDNGS---KGYAYVHFDSLAAANRAI------WHMNGVRL 170
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
I+++NL T+ ++ L + F +G + A+V++ E + KGF +V F E A++A
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMM----EVGQGKGFGVVCFSSFEEASKAVD 359
Query: 397 HLDGTVFLGRMLHLIPGKPK 416
++G + + LH+ G+ +
Sbjct: 360 EMNGRIVGSKPLHVTLGQAR 379
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 25/172 (14%)
Query: 580 DTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRES 639
D TLYI NL+ +D + F +CGP+ +V+V R K + GYGFV+F
Sbjct: 28 DATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGN-----HQGYGFVEFRNEVD 82
Query: 640 LNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQ 699
+ ALK++ L + L +S ++ R++ +V G+ + + N+ +
Sbjct: 83 ADYALKLMNMVKLYGKALRLNKSAQD---------RRNFDV----GANVFLGNLDPDVDE 129
Query: 700 SEVEELFKAFGEL---KFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG + K +R P+ +GL RGFGFV F T + A+ A+
Sbjct: 130 KTIYDTFSAFGNIISAKIMRDPE----TGLSRGFGFVSFDTFEASDAALAAM 177
>gi|365760982|gb|EHN02660.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 466
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T LY+KN+N +T++ + F + GPI S ++ + D K G+GFV + E
Sbjct: 108 TNLYVKNINSETTDEQFQDLFIQFGPIVSASLEKDADGK------LKGFGFVNYENHEDA 161
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKR----KSSNVAKQTGSKILVRNIPFQ 696
+A++ L S L+ ++ + R+ + E K+ + +AK G + V+N+
Sbjct: 162 VKAVEALNESDLNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDS 221
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
++EE F +G + ++ + +G +GFGFV F T EA +A+ Q + G
Sbjct: 222 VDDEKLEEEFTPYGTITSAKVMR--TENGKSKGFGFVCFSTPEEATKAITEKNQQI-VAG 278
Query: 757 RRLVLEWAEEAD 768
+ L + A+ D
Sbjct: 279 KPLYVAIAQRKD 290
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ + ++ F G I S +A ++ K S G+GFV F + +
Sbjct: 17 IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK------SKGFGFVHFEEEGAAKE 70
Query: 643 ALKVLQNSSLDEHQI----ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAK 698
A+ L L+ +I L R R+ + E T K + + V+NI +
Sbjct: 71 AIDALNGMLLNGQEIYVAPHLSRKERDSQLEET----------KAHYTNLYVKNINSETT 120
Query: 699 QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRR 758
+ ++LF FG + L K G +GFGFV + +A +A++AL +S L G +
Sbjct: 121 DEQFQDLFIQFGPIVSASLEKD--ADGKLKGFGFVNYENHEDAVKAVEALNESD-LNGEK 177
Query: 759 LVLEWAE 765
L + A+
Sbjct: 178 LYVGRAQ 184
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 221 KRQYHTIVVKNLPAGVKK---KDLKAYFKPLPLASVR----TTFLGMAYIGFKDEKNCNK 273
K Y + VKN+ + +DL F P+ AS+ G ++ +++ ++ K
Sbjct: 104 KAHYTNLYVKNINSETTDEQFQDLFIQFGPIVSASLEKDADGKLKGFGFVNYENHEDAVK 163
Query: 274 ALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSVQFAED 332
A+ N+S G++L + + K N M +K ++ + + + +
Sbjct: 164 AVEALNESDLNGEKLYVGRAQKKNE-------------RMHVLKKQYEAYRLEKMAKYQG 210
Query: 333 IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHAT 392
+ +FV+NL +V ++ L + F YG + + + E K+KGF V F PE AT
Sbjct: 211 V----NLFVKNLDDSVDDEKLEEEFTPYGTITSAKV-MRTENGKSKGFGFVCFSTPEEAT 265
Query: 393 QAYQHLDGTVFLGRMLHL 410
+A + + G+ L++
Sbjct: 266 KAITEKNQQIVAGKPLYV 283
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 317 AKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDK 376
A H +E Q E A ++V+N++ T++ LF ++GP+ L D + K
Sbjct: 88 APHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQDLFIQFGPIVSASLEKDAD-GK 146
Query: 377 TKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLD 436
KGF V + E A +A + L+ + G L++ + K+NE ++H +++ +
Sbjct: 147 LKGFGFVNYENHEDAVKAVEALNESDLNGEKLYVGRAQ-KKNE-----RMHVL--KKQYE 198
Query: 437 AFNQVVEARSKRI-ILVKNLPYRTLPTDLKALFEPFGDL 474
A+ A+ + + + VKNL L+ F P+G +
Sbjct: 199 AYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFTPYGTI 237
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 20/140 (14%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
SG IF++NL + L F +G + + D E K+KGF V F A +A
Sbjct: 14 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAI 72
Query: 396 QHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRI-ILVKN 454
L+G + G+ +++ P H ER +Q+ E ++ + VKN
Sbjct: 73 DALNGMLLNGQEIYVAP--------------HLSRKERD----SQLEETKAHYTNLYVKN 114
Query: 455 LPYRTLPTDLKALFEPFGDL 474
+ T + LF FG +
Sbjct: 115 INSETTDEQFQDLFIQFGPI 134
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 8/168 (4%)
Query: 582 TLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLN 641
T++++ L ++ F+K GP+A + + + S G G+V+F + ES+
Sbjct: 210 TVFVQQLAARLRTRELKDFFEKAGPVAEAQIVKDRVSNR-----SKGVGYVEFRSEESVT 264
Query: 642 QALKVLQNSSLDEHQI-ELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
AL++ L I ++ + +N + +T + N ++ V NI F +S
Sbjct: 265 AALQLTGQKLLGIPVIVQMTEAEKNRQVRSTAEATSNGNSTGVPFHRLYVGNIHFSITES 324
Query: 701 EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
++ +F+ FGEL+FV+L K +G RG+GFV+F ++A+ A++ +
Sbjct: 325 DLRNVFEPFGELEFVQLQKD--DTGRSRGYGFVQFRDSDQAREALEKM 370
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 15/180 (8%)
Query: 329 FAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMP 388
ED + +FV+ L+ + +L FEK GP+AE + D+ ++++KG V F
Sbjct: 201 LTEDERDRRTVFVQQLAARLRTRELKDFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFRSE 260
Query: 389 EHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKR 448
E T A Q L G LG IP + E + +V V R
Sbjct: 261 ESVTAALQ-LTGQKLLG-----IPVIVQMTEAEKNRQVRSTAEATSNGNSTGVPFHR--- 311
Query: 449 IILVKNLPYRTLPTDLKALFEPFGDLGRVLVPPYGIT-----GLVEFLQKNQAKAAFNSL 503
+ V N+ + +DL+ +FEPFG+L V + G V+F +QA+ A +
Sbjct: 312 -LYVGNIHFSITESDLRNVFEPFGELEFVQLQKDDTGRSRGYGFVQFRDSDQAREALEKM 370
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 85/235 (36%), Gaps = 52/235 (22%)
Query: 445 RSKRIILVKNLPYRTLPTDLKALFEPFGDLG-------RVLVPPYGITGLVEFLQKNQAK 497
R +R + V+ L R +LK FE G + RV G+ G VEF +
Sbjct: 206 RDRRTVFVQQLAARLRTRELKDFFEKAGPVAEAQIVKDRVSNRSKGV-GYVEFRSEESVT 264
Query: 498 AAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEED 557
AA L K +P+ ++ E EKN + E N+
Sbjct: 265 AALQ-LTGQKLLGIPVIVQMT---------------EAEKNRQVRSTAEATSNGNST--- 305
Query: 558 NQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKD 617
GVP LY+ N++F+ TE +R F+ G + V + +
Sbjct: 306 ---GVPF----------------HRLYVGNIHFSITESDLRNVFEPFGELEFVQLQKDDT 346
Query: 618 PKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLESEATT 672
+S GYGFVQF + +AL+ + L I + N E+T
Sbjct: 347 GRS------RGYGFVQFRDSDQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTA 395
>gi|452001105|gb|EMD93565.1| hypothetical protein COCHEDRAFT_1096208 [Cochliobolus
heterostrophus C5]
Length = 749
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 158/427 (37%), Gaps = 114/427 (26%)
Query: 213 PVSKAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPLP-LASVRTT-------FLGMAYIG 264
P S AP H + ++ V L V + L F + +AS+R LG AY+
Sbjct: 36 PTSAAPAHNQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVN 95
Query: 265 FKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQ 323
+ ++ KAL + N + KGK I +D + + +G
Sbjct: 96 YNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTG--------------------- 134
Query: 324 EDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALV 383
G +F++NL + + L F +G + + D E +KG+ V
Sbjct: 135 ------------QGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQD-ELGNSKGYGFV 181
Query: 384 TFLMPEHATQAYQHLDGT------VFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDA 437
+ E A A +H++G VF+G H IP K + ++ E K +
Sbjct: 182 HYETAEAANNAIKHVNGMLLNEKKVFVG---HHIPKKERMSK----------FEEMKANF 228
Query: 438 FNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDLGRVLVP------PYGITGLVEFL 491
N I VKN+ + + LFE GD+ + G G V ++
Sbjct: 229 TN----------IYVKNIDLDVSDEEFRELFEKHGDITSASIARDEQGKSRGF-GFVNYI 277
Query: 492 QKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKE 551
+ A AA ++L T F+ LY+ G+ ++K+E E E ++ +
Sbjct: 278 KHEAASAAVDALNDTDFRGQKLYV----------------GRAQKKHEREEELRKQYEAA 321
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVT 611
++ QGV LYIKNLN + ++ +R F G I S
Sbjct: 322 RLEKQSKYQGV-------------------NLYIKNLNDDVDDEKLRDMFTPFGTITSAK 362
Query: 612 VARKKDP 618
V R P
Sbjct: 363 VMRDAMP 369
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 165/421 (39%), Gaps = 77/421 (18%)
Query: 303 AADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGP 362
AD N N+ A ++ + S ++V L +VTE L +LF G
Sbjct: 14 GADANGAQINTNVAAAQAEAPTPTSAAPAHNQNSASLYVGELDPSVTEAMLFELFSSIGQ 73
Query: 363 LAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEGNV 422
+A + + D T ++ G+A V + E +A + L+ TV I GKP
Sbjct: 74 VASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTV--------IKGKP------- 118
Query: 423 DGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTLPTDLKALFEPFGDL--GRVLVP 480
C I + D + + + +KNL + L F FG++ +V
Sbjct: 119 -----CRIMWSQRDP---ALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQD 170
Query: 481 PYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKEKEKNEE 540
G + F+ A+AA N++ + G+ K+ G K E
Sbjct: 171 ELGNSKGYGFVHYETAEAANNAIKHVN-------------GMLLNEKKVFVGHHIPKKER 217
Query: 541 EGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRH 600
+ EE K N T +Y+KN++ + +++ R
Sbjct: 218 MSKF--EEMKANF---------------------------TNIYVKNIDLDVSDEEFREL 248
Query: 601 FKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELK 660
F+K G I S ++AR + K S G+GFV + E+ + A+ L ++ ++ +
Sbjct: 249 FEKHGDITSASIARDEQGK------SRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVG 302
Query: 661 RSNRNLESEATTVKR-KSSNVAKQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVR 716
R+ + E E K+ +++ + KQ+ G + ++N+ ++ ++F FG + +
Sbjct: 303 RAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAK 362
Query: 717 L 717
+
Sbjct: 363 V 363
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 28/201 (13%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
++IKNL+ ++ F G I S VA+ + S GYGFV + T E+ N
Sbjct: 138 VFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNS------KGYGFVHYETAEAANN 191
Query: 643 ALKVLQNSSLDE------HQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQ 696
A+K + L+E H I K E K + I V+NI
Sbjct: 192 AIKHVNGMLLNEKKVFVGHHIPKKERMSKFEE------------MKANFTNIYVKNIDLD 239
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYG 756
E ELF+ G++ + + G RGFGFV +I A A+ AL T G
Sbjct: 240 VSDEEFRELFEKHGDITSASIARDE--QGKSRGFGFVNYIKHEAASAAVDAL-NDTDFRG 296
Query: 757 RRLVLEWAEEA-DNVEDIRKR 776
++L + A++ + E++RK+
Sbjct: 297 QKLYVGRAQKKHEREEELRKQ 317
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 14 HISLLDLDEVEFIYKITQEQLKAKFEEKGTVTDVQLKYTTEGKFRRFAFIGYHREDQAQA 73
++ +DLD ++ E+ + FE+ G +T + +GK R F F+ Y + + A A
Sbjct: 232 YVKNIDLD-------VSDEEFRELFEKHGDITSASIARDEQGKSRGFGFVNYIKHEAASA 284
Query: 74 ALDYFNNTYVFSSRIKVEKC 93
A+D N+T ++ V +
Sbjct: 285 AVDALNDTDFRGQKLYVGRA 304
>gi|425781065|gb|EKV19047.1| Nucleolin protein Nsr1, putative [Penicillium digitatum PHI26]
Length = 537
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 12/187 (6%)
Query: 583 LYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQ 642
L+I NL++N E+ ++R F + G ++ V + ++ S G+G+V++ + +
Sbjct: 283 LFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRE-----TGRSRGFGYVEYNSAADAAK 337
Query: 643 ALKVLQNSSLDEHQIEL-----KRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQA 697
A++ + + LD I L +++N + R + + V N+PF A
Sbjct: 338 AMEAKKGTDLDGRTINLDYAAPRQANTQGADRSQDRARSYGDQTSPESDTLFVGNLPFSA 397
Query: 698 KQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGR 757
+ + E+F A G + +RLP + +G +GFG+V+F + +EAK A AL L GR
Sbjct: 398 TEDALHEVFGAQGSVLGIRLPTEQE-TGRPKGFGYVQFSSIDEAKAAHAAL-NGHELEGR 455
Query: 758 RLVLEWA 764
+ L+++
Sbjct: 456 AIRLDFS 462
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 321 KSQEDSVQFAEDIA-ESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKG 379
+SQ+ + + + + ES +FV NL ++ TED L ++F G + + LP ++ET + KG
Sbjct: 369 RSQDRARSYGDQTSPESDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKG 428
Query: 380 FALVTFLMPEHATQAYQHLDGTVFLGRMLHL 410
F V F + A A+ L+G GR + L
Sbjct: 429 FGYVQFSSIDEAKAAHAALNGHELEGRAIRL 459
>gi|444732647|gb|ELW72929.1| Polyadenylate-binding protein 5 [Tupaia chinensis]
Length = 382
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 156/414 (37%), Gaps = 80/414 (19%)
Query: 341 VRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDG 400
V +L VTED L K F GPL + D T G+ V F P A A ++
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 401 TVFLGRMLHLIPGKPKENEGNVDGKVHCCISERKLDAFNQVVEARSKRIILVKNLPYRTL 460
+ G+ L+ +P + RK N I +KNL
Sbjct: 82 DLINGKPFRLMWSQPDDRL-------------RKSGVGN----------IFIKNLDKSID 118
Query: 461 PTDLKALFEPFGDL--GRVLVPPYGITGLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWA 518
L LF FG++ +V+ G K A F+SLA W
Sbjct: 119 NRALFYLFSAFGNILSCKVVCDDNG--------SKGYAYVHFDSLAAAN------RAIWH 164
Query: 519 PEGVFAEAKEKSKGKEKEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPE 578
GV ++ G+ K PE E E R+
Sbjct: 165 MNGVRLNNRQVYVGRFK--------------------------FPE--ERAAEVRTRDRA 196
Query: 579 PDTTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRE 638
T +++KN + ++ ++ F + GP SV V R KS G+GFV++ T E
Sbjct: 197 TFTNVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDAGGKSK------GFGFVRYETHE 250
Query: 639 SLNQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQT----GSKILVRNIP 694
+ +A+ L S+D + + R+ + +E A +R K+ G I ++N+
Sbjct: 251 AAQKAVLDLHGKSMDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLD 310
Query: 695 FQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+++E F +FG + ++ M+ G +GFG V F + EA +A+ +
Sbjct: 311 ETIDDEKLKEEFSSFGSISRAKV---MMEVGQGKGFGVVCFSSFEEATKAVDEM 361
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 339 IFVRNLSYTVTEDDLTKLFEKYGPL--AEVILPIDKETDKTKGFALVTFLMPEHATQAYQ 396
I+++NL T+ ++ L + F +G + A+V++ E + KGF +V F E AT+A
Sbjct: 304 IYIKNLDETIDDEKLKEEFSSFGSISRAKVMM----EVGQGKGFGVVCFSSFEEATKAVD 359
Query: 397 HLDGTVFLGRMLHLIPGKPK 416
++G V + LH+ G+ +
Sbjct: 360 EMNGRVVGSKPLHVTLGQAR 379
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 26/175 (14%)
Query: 585 IKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQAL 644
+ +L+ + TED + + F+ GP+ + R +SP +GYG+V F AL
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSP-----LGYGYVNFRFPADAEWAL 76
Query: 645 KVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEE 704
+ ++ L + S+ RKS I ++N+ +
Sbjct: 77 NTMNFDLINGKPFRL------MWSQPDDRLRKSGV------GNIFIKNLDKSIDNRALFY 124
Query: 705 LFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRL 759
LF AFG + ++ GS +G+ +V F + A RA+ H+ G RL
Sbjct: 125 LFSAFGNILSCKVVCDDNGS---KGYAYVHFDSLAAANRAI------WHMNGVRL 170
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 332 DIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHA 391
D A +FV+N + ++ L +LF +YGP E + I K+KGF V + E A
Sbjct: 194 DRATFTNVFVKNFGDDMDDEKLKELFSEYGP-TESVKVIRDAGGKSKGFGFVRYETHEAA 252
Query: 392 TQAYQHLDGTVFLGRMLHL 410
+A L G G++L++
Sbjct: 253 QKAVLDLHGKSMDGKVLYV 271
>gi|321261800|ref|XP_003195619.1| polyadenylate-binding protein [Cryptococcus gattii WM276]
gi|317462093|gb|ADV23832.1| polyadenylate-binding protein, putative [Cryptococcus gattii WM276]
Length = 675
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
T +YIKN++ T+ K GP SV ++R + Q +S G+GFV + ES
Sbjct: 229 TNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDE------QGVSKGFGFVNYENHESA 282
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVK----RKSSNVAKQTGSKILVRNIPFQ 696
QA+ L ++ ++ R+ E EA K ++ N AK G + ++N+ +
Sbjct: 283 KQAVDELNEKEINGKKLYAGRAQTKSEREAELKKSHEEKRIENEAKSAGVNLYIKNLDDE 342
Query: 697 AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRAMKAL 748
+ F+AFG + ++ + SG+ RGFGFV + + +EA +A+ +
Sbjct: 343 WDDDRLRAEFEAFGTITSSKVMRD--DSGVSRGFGFVCYSSPDEATKAVSEM 392
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 155/430 (36%), Gaps = 107/430 (24%)
Query: 249 PLASVRTT-------FLGMAYIGFKDEKNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKY 300
P+AS+R LG AY+ + + + +AL N S KG+ I +D + +
Sbjct: 73 PVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNYSLIKGQSCRIMWSQRDPALRK 132
Query: 301 SGAADDNNNASMENIKAKHWKSQEDSVQFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKY 360
+G G IF++NL ++ L F +
Sbjct: 133 TG---------------------------------QGNIFIKNLDQSIDNKALHDTFAAF 159
Query: 361 GPLAEVILPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLHLIPGKPKENEG 420
G + + D E K++GFA V + E A A + ++G +
Sbjct: 160 GDILSCKVGTD-ENGKSRGFAFVHYSTGEAADAAIKAVNGMLL----------------- 201
Query: 421 NVDGKVHCCISERKLDAFNQVVEARSKRI-ILVKNLPYRTLPTDLKALFEPFGDLGRVLV 479
D KV+ K + ++V E R++ + +KN+ + + L +PFG V +
Sbjct: 202 -NDKKVYVGHHVGKKERLSKVEELRAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVAL 260
Query: 480 P--PYGIT---GLVEFLQKNQAKAAFNSLAYTKFKEVPLYLEWAPEGVFAEAKEKSKGKE 534
G++ G V + AK A + L + LY G+
Sbjct: 261 SRDEQGVSKGFGFVNYENHESAKQAVDELNEKEINGKKLY----------------AGRA 304
Query: 535 KEKNEEEGEEGEEEKKENTAEEDNQQGVPEVEENVEEDEEREPEPDTTLYIKNLNFNSTE 594
+ K+E E E + +++ E GV LYIKNL+ +
Sbjct: 305 QTKSEREAELKKSHEEKRIENEAKSAGV-------------------NLYIKNLDDEWDD 345
Query: 595 DSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDE 654
D +R F+ G I S V R +S G+GFV + + + +A+ + +
Sbjct: 346 DRLRAEFEAFGTITSSKVMRDDS------GVSRGFGFVCYSSPDEATKAVSEMNGKMIGT 399
Query: 655 HQIELKRSNR 664
+ + + R
Sbjct: 400 KPLYVALAQR 409
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 581 TTLYIKNLNFNSTEDSIRRHFKKCGPIASVTVARKKDPKSPGQFLSMGYGFVQFYTRESL 640
+LY+ L+ + TE + F GP+AS+ V R + S+GY +V +
Sbjct: 48 ASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRR-----SLGYAYVNYLNAADG 102
Query: 641 NQALKVLQNSSLDEHQIELKRSNRNLESEATTVKRKSSNVAKQTGSKILVRNIPFQAKQS 700
+AL+ L N SL + Q S R + S+ RK+ I ++N+
Sbjct: 103 ERALEHL-NYSLIKGQ-----SCRIMWSQRDPALRKTGQ------GNIFIKNLDQSIDNK 150
Query: 701 EVEELFKAFGELKFVRLPKKMVGS---GLHRGFGFVEFITKNEAKRAMKAL 748
+ + F AFG++ + VG+ G RGF FV + T A A+KA+
Sbjct: 151 ALHDTFAAFGDILSCK-----VGTDENGKSRGFAFVHYSTGEAADAAIKAV 196
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 336 SGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLMPEHATQAY 395
S ++V L +VTE L ++F GP+A + + D T ++ G+A V +L +A
Sbjct: 47 SASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 106
Query: 396 QHLDGTVFLGRMLHLI-----PGKPKENEGNV 422
+HL+ ++ G+ ++ P K +GN+
Sbjct: 107 EHLNYSLIKGQSCRIMWSQRDPALRKTGQGNI 138
>gi|225561960|gb|EEH10240.1| nucleic acid-binding protein [Ajellomyces capsulatus G186AR]
Length = 325
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 22/231 (9%)
Query: 552 NTAEEDNQQGVPEVEENVEEDEEREP---EPDTTLYIKNLNFNSTEDSIRRHFKKCGPIA 608
N +E ++ + + E EREP +P+ T+Y+ NL F T + ++R K G I
Sbjct: 85 NGSEPYGRRSFQQTDRRNESQREREPLPIKPNETIYVGNLFFEVTAEDLKRDMAKFGTIY 144
Query: 609 SVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNLES 668
SV + + +S G+ +VQF + E+ A+ + S + +I + S RN +
Sbjct: 145 SVRIVYD------SRGMSRGFAYVQFDSVEAAEAAISEMNMSIYEGRRIVVNYSTRNSAA 198
Query: 669 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 728
T A + + + N+ F+ E+ +LF+ + VR+ +G R
Sbjct: 199 PRTR--------ASEPTKTLFIGNLSFEMTDRELNDLFRDIPNVDDVRVSVDK-RTGRPR 249
Query: 729 GFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNVEDIRKRTNR 779
GF +F+ AK AM+ L + YGR L L+++ N +D+ NR
Sbjct: 250 GFAHADFLDVESAKAAMEILKEKAP-YGRPLRLDYSL---NTKDMLASQNR 296
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 216 KAPVHKRQYHTIVVKNLPAGVKKKDLKAYFKPL-PLASVRTTF------LGMAYIGFKDE 268
+ P+ + TI V NL V +DLK + SVR + G AY+ F
Sbjct: 108 REPLPIKPNETIYVGNLFFEVTAEDLKRDMAKFGTIYSVRIVYDSRGMSRGFAYVQFDSV 167
Query: 269 KNCNKALNK-NKSFWKGKQLNIYKYSKDNSAKYSGAADDNNNASMENIKAKHWKSQEDSV 327
+ A+++ N S ++G+++ + YS NSA A ++ E +
Sbjct: 168 EAAEAAISEMNMSIYEGRRI-VVNYSTRNSA------------------APRTRASEPTK 208
Query: 328 QFAEDIAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVILPIDKETDKTKGFALVTFLM 387
+F+ NLS+ +T+ +L LF + +V + +DK T + +GFA FL
Sbjct: 209 T----------LFIGNLSFEMTDRELNDLFRDIPNVDDVRVSVDKRTGRPRGFAHADFLD 258
Query: 388 PEHATQAYQHLDGTVFLGRMLHL 410
E A A + L GR L L
Sbjct: 259 VESAKAAMEILKEKAPYGRPLRL 281
>gi|344304396|gb|EGW34628.1| hypothetical protein SPAPADRAFT_57674 [Spathaspora passalidarum
NRRL Y-27907]
Length = 414
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 26/231 (11%)
Query: 550 KENTAEEDNQQGVPE---VEENVEEDEEREPEPDTTLYIKNLNFNSTEDSIRRHFKKCGP 606
K+ A+E+ V + DE EP TL++ L++N ++ ++R F+ G
Sbjct: 144 KKRKADEEESSEESSEEPVAKKARTDETDEP---ATLFVGRLSWNIDDEWLKREFEHIGG 200
Query: 607 IASVTVARKKDPKSPGQFLSMGYGFVQFYTRESLNQALKVLQNSSLDEHQIELKRSNRNL 666
+ V + +S G+ S GYG+V F ++S +AL +Q +D I L S
Sbjct: 201 VIGARVIME---RSTGK--SRGYGYVDFDNKDSAEKALVEMQGKEIDGRPINLDMSTGKP 255
Query: 667 ESEATTVKRKSSNVAKQTG-------SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK 719
+ KS++ AKQ G + + N+ F A++ + E+F G + R+P
Sbjct: 256 HAS------KSNDRAKQFGDTPSAPSDTLFIGNLSFNAQRDNLFEIFGQHGTVISCRIPT 309
Query: 720 KMVGSGLHRGFGFVEFITKNEAKRAMKALCQSTHLYGRRLVLEWAEEADNV 770
+ +GFG+V+F + +EAK A++AL ++ GR L+++ DN
Sbjct: 310 H-PDTQQPKGFGYVQFSSVDEAKAALEAL-NGEYIEGRACRLDFSAPRDNA 358
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 309 NASMENIKAKHWKSQEDSVQFAED-IAESGRIFVRNLSYTVTEDDLTKLFEKYGPLAEVI 367
N M K KS + + QF + A S +F+ NLS+ D+L ++F ++G +
Sbjct: 247 NLDMSTGKPHASKSNDRAKQFGDTPSAPSDTLFIGNLSFNAQRDNLFEIFGQHGTVISCR 306
Query: 368 LPIDKETDKTKGFALVTFLMPEHATQAYQHLDGTVFLGRMLH---LIP 412
+P +T + KGF V F + A A + L+G GR P
Sbjct: 307 IPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYIEGRACRLDFSAP 354
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.131 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,548,236,689
Number of Sequences: 23463169
Number of extensions: 559670900
Number of successful extensions: 4091614
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16911
Number of HSP's successfully gapped in prelim test: 14889
Number of HSP's that attempted gapping in prelim test: 3520177
Number of HSP's gapped (non-prelim): 395097
length of query: 787
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 636
effective length of database: 8,816,256,848
effective search space: 5607139355328
effective search space used: 5607139355328
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 81 (35.8 bits)