BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3346
(79 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345490259|ref|XP_001605134.2| PREDICTED: probable RNA-binding protein 19-like [Nasonia
vitripennis]
Length = 904
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 62/79 (78%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
+ ++ T +K+S + +QTG+KILVRN+PFQA EV+ELFKAFGE+K VRLPKKMVG
Sbjct: 761 LQTDVITTAKKTSKITEQTGTKILVRNVPFQANADEVKELFKAFGEIKSVRLPKKMVGEE 820
Query: 61 LHRGFGFVEFITKNEAKRV 79
HRGFGFVEF TK EAKR
Sbjct: 821 KHRGFGFVEFYTKKEAKRA 839
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
NVA+ +I +RN+ + A + ++ +LF+ +G L V LP MV + +GFG V F+
Sbjct: 354 NVAE--SGRIFLRNLSYTATEDDIRKLFETYGPLSEVNLPIDMV-TRKPKGFGTVTFLMP 410
Query: 74 NEA 76
A
Sbjct: 411 EHA 413
>gi|392352553|ref|XP_003751242.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 955
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA Q E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 811 ALTSTRKKQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRG 870
Query: 65 FGFVEFITKNEAKRV 79
FGFV+FITK +AK+
Sbjct: 871 FGFVDFITKQDAKKA 885
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEDRFRQLFAAFGTLTDCSL--KFTKEGKFRKFGFIGFKSEEEAQ 56
>gi|30794154|ref|NP_083038.1| probable RNA-binding protein 19 [Mus musculus]
gi|73621449|sp|Q8R3C6.1|RBM19_MOUSE RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
gi|19343654|gb|AAH25619.1| RNA binding motif protein 19 [Mus musculus]
gi|21707580|gb|AAH34010.1| RNA binding motif protein 19 [Mus musculus]
gi|148687830|gb|EDL19777.1| RNA binding motif protein 19 [Mus musculus]
Length = 952
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA Q E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 808 ALTSTRKKQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRG 867
Query: 65 FGFVEFITKNEAKRV 79
FGFV+FITK +AK+
Sbjct: 868 FGFVDFITKQDAKKA 882
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQ 56
>gi|392332679|ref|XP_003752658.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 846
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA Q E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 702 ALTSTRKKQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRG 761
Query: 65 FGFVEFITKNEAKRV 79
FGFV+FITK +AK+
Sbjct: 762 FGFVDFITKQDAKKA 776
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEDRFRQLFAAFGTLTDCSL--KFTKEGKFRKFGFIGFKSEEEAQ 56
>gi|12835985|dbj|BAB23448.1| unnamed protein product [Mus musculus]
Length = 590
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA Q E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 446 ALTSTRKKQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRG 505
Query: 65 FGFVEFITKNEAKRV 79
FGFV+FITK +AK+
Sbjct: 506 FGFVDFITKQDAKKA 520
>gi|345790896|ref|XP_543410.3| PREDICTED: probable RNA-binding protein 19 [Canis lupus familiaris]
Length = 970
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 57/75 (76%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA + E++ELF FGELK VRLPKKM G+G HRG
Sbjct: 818 ALTSTRKKQVPRKQTTSKILVRNIPFQADKREIQELFSTFGELKTVRLPKKMTGTGTHRG 877
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 878 FGFVDFLTKQDAKRA 892
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S+++V+N+P K+ +LF +FG L L K G R FGF+ F ++ EA
Sbjct: 2 SRLIVKNLPNGMKEDRFRQLFASFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEA 55
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
++ +RN+P+ + + +++ LF FG L + P + + +GF FV FI A R
Sbjct: 406 RLFIRNLPYTSTEEDLQRLFSKFGPLSELHYPIDSL-TKKPKGFAFVTFIFPEHAVRA 462
>gi|168278697|dbj|BAG11228.1| RNA binding motif protein 19 [synthetic construct]
Length = 960
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T+ RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 816 AVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 875
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 876 FGFVDFLTKQDAKRA 890
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 58
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKNEAK 77
G + ++N+ F + +++E+F G +K + KK +G L GFGFVE+ +A+
Sbjct: 729 GCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQ 788
Query: 78 RV 79
+
Sbjct: 789 KA 790
>gi|40788328|dbj|BAA31657.2| KIAA0682 protein [Homo sapiens]
Length = 973
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T+ RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 829 AVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 888
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 889 FGFVDFLTKQDAKRA 903
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 15 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 71
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKNEAK 77
G + ++N+ F + +++E+F G +K + KK +G L GFGFVE+ +A+
Sbjct: 742 GCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQ 801
Query: 78 RV 79
+
Sbjct: 802 KA 803
>gi|5912081|emb|CAB55987.1| hypothetical protein [Homo sapiens]
Length = 960
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T+ RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 816 AVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 875
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 876 FGFVDFLTKQDAKRA 890
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 58
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKNEAK 77
G + ++N+ F + +++E+F G +K + KK +G L GFGFVE+ +A+
Sbjct: 729 GCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQ 788
Query: 78 RV 79
+
Sbjct: 789 KA 790
>gi|13279134|gb|AAH04289.1| RBM19 protein [Homo sapiens]
gi|13544005|gb|AAH06137.1| RBM19 protein [Homo sapiens]
gi|190689379|gb|ACE86464.1| RNA binding motif protein 19 protein [synthetic construct]
gi|190690741|gb|ACE87145.1| RNA binding motif protein 19 protein [synthetic construct]
Length = 960
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T+ RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 816 AVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 875
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 876 FGFVDFLTKQDAKRA 890
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 58
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKNEAK 77
G + ++N+ F + +++E+F G +K + KK +G L GFGFVE+ +A+
Sbjct: 729 GCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQ 788
Query: 78 RV 79
+
Sbjct: 789 KA 790
>gi|226497574|ref|NP_057280.2| probable RNA-binding protein 19 [Homo sapiens]
gi|226497654|ref|NP_001140170.1| probable RNA-binding protein 19 [Homo sapiens]
gi|226497734|ref|NP_001140171.1| probable RNA-binding protein 19 [Homo sapiens]
gi|308153566|sp|Q9Y4C8.3|RBM19_HUMAN RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
Length = 960
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T+ RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 816 AVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 875
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 876 FGFVDFLTKQDAKRA 890
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 58
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKNEAK 77
G + ++N+ F + +++E+F G +K + KK +G L GFGFVE+ +A+
Sbjct: 729 GCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQ 788
Query: 78 RV 79
+
Sbjct: 789 KA 790
>gi|158256324|dbj|BAF84133.1| unnamed protein product [Homo sapiens]
gi|189054403|dbj|BAG37176.1| unnamed protein product [Homo sapiens]
Length = 960
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T+ RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 816 AVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 875
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 876 FGFVDFLTKQDAKRA 890
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 58
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKNEAK 77
G + ++N+ F + +++E+F G +K + KK +G L GFGFVE+ +A+
Sbjct: 729 GCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQ 788
Query: 78 RV 79
+
Sbjct: 789 KA 790
>gi|119618468|gb|EAW98062.1| RNA binding motif protein 19, isoform CRA_a [Homo sapiens]
gi|119618469|gb|EAW98063.1| RNA binding motif protein 19, isoform CRA_a [Homo sapiens]
Length = 777
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T+ RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 633 AVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 692
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 693 FGFVDFLTKQDAKRA 707
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 58
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKNEAK 77
G + ++N+ F + +++E+F G +K + KK +G L GFGFVE+ +A+
Sbjct: 546 GCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQ 605
Query: 78 RV 79
+
Sbjct: 606 KA 607
>gi|344295376|ref|XP_003419388.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
19-like [Loxodonta africana]
Length = 1089
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
ATT RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK+ G+G HRG
Sbjct: 809 ATTSTRKKQVARKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGAHRG 868
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 869 FGFVDFLTKQDAKRA 883
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF +FG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFSSFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQ 56
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
++ VRN+P+ + + E+E+LF +G L + P + + +GF F+ F+
Sbjct: 403 RLFVRNLPYTSTEEELEKLFSKYGPLSELHYPIDSL-TKKPKGFAFITFM 451
>gi|281343470|gb|EFB19054.1| hypothetical protein PANDA_014807 [Ailuropoda melanoleuca]
Length = 947
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK + KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 803 ALTSARKKQVLRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRG 862
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 863 FGFVDFLTKQDAKRA 877
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
++ +RN+P+ + + ++E+LF FG L + P + + +GF FV F+ A R
Sbjct: 393 RLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSL-TKKPKGFAFVTFMFPEHAVRA 449
>gi|301779826|ref|XP_002925333.1| PREDICTED: probable RNA-binding protein 19-like [Ailuropoda
melanoleuca]
Length = 963
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK + KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 797 ALTSARKKQVLRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRG 856
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 857 FGFVDFLTKQDAKRA 871
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFRSEEEAR 56
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
++ +RN+P+ + + ++E+LF FG L + P + + +GF FV F+ A R
Sbjct: 405 RLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSL-TKKPKGFAFVTFMFPEHAVRA 461
>gi|194043009|ref|XP_001928191.1| PREDICTED: probable RNA-binding protein 19 [Sus scrofa]
Length = 967
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 54/75 (72%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 823 APTATRKKQVARKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRG 882
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F TK +AKR
Sbjct: 883 FGFVDFFTKQDAKRA 897
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQ 56
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
++ VRN+P+ + + ++E+LF +G L + P + + +GF FV F+
Sbjct: 410 RLFVRNLPYTSSEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFVTFM 458
>gi|397525018|ref|XP_003832476.1| PREDICTED: probable RNA-binding protein 19 [Pan paniscus]
Length = 961
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 817 AVTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 876
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 877 FGFVDFLTKQDAKRA 891
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 58
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK--MVGSGLHRGFGFVEFITKNEAK 77
G + ++N+ F + +++E+F G +K + KK G+ L GFGFVE+ +A+
Sbjct: 730 GCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQ 789
Query: 78 RV 79
+
Sbjct: 790 KA 791
>gi|390468249|ref|XP_002753088.2| PREDICTED: probable RNA-binding protein 19 [Callithrix jacchus]
Length = 1066
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 922 AVTSARKKQIPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 981
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 982 FGFVDFLTKQDAKRA 996
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 16 AKQTG----SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
+KQ G S+++V+N+P K+ +LF AFG L L K G R FGF+ F
Sbjct: 99 SKQWGPCAMSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFK 156
Query: 72 TKNEAKRV 79
T+ EA++
Sbjct: 157 TEEEAQKA 164
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK--MVGSGLHRGFGFVEFITKNEA 76
+G + ++N+ F + +++E+F G +K + KK G+ L GFGFVE+ +A
Sbjct: 834 SGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGALLSMGFGFVEYRKPEQA 893
Query: 77 KRV 79
++
Sbjct: 894 QKA 896
>gi|114647138|ref|XP_522578.2| PREDICTED: probable RNA-binding protein 19 [Pan troglodytes]
gi|410216396|gb|JAA05417.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410216398|gb|JAA05418.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263956|gb|JAA19944.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263958|gb|JAA19945.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292596|gb|JAA24898.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292598|gb|JAA24899.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339181|gb|JAA38537.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339183|gb|JAA38538.1| RNA binding motif protein 19 [Pan troglodytes]
Length = 961
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 817 AVTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 876
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 877 FGFVDFLTKQDAKRA 891
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 58
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK--MVGSGLHRGFGFVEFITKNEAK 77
G + ++N+ F + +++E+F G +K + KK G+ L GFGFVE+ +A+
Sbjct: 730 GCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQ 789
Query: 78 RV 79
+
Sbjct: 790 KA 791
>gi|395833986|ref|XP_003789998.1| PREDICTED: probable RNA-binding protein 19 [Otolemur garnettii]
Length = 959
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 815 ALTSARKKQVSKKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRG 874
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 875 FGFVDFLTKQDAKRA 889
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKEGKFRKFGFIGFKSEEEAQ 56
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH--RGFGFVEFI 71
++ VRN+P+ + + ++E+LF FG L + P + S + +GF FV F+
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKFGPLSEIHYP---IDSLIKKPKGFAFVTFM 451
>gi|354466972|ref|XP_003495945.1| PREDICTED: probable RNA-binding protein 19 [Cricetulus griseus]
gi|344237019|gb|EGV93122.1| putative RNA-binding protein 19 [Cricetulus griseus]
Length = 954
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 55/73 (75%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T RK KQT SKILVRNIPFQA Q E+ ELF FGELK VRLPKKM G+G HRGFG
Sbjct: 811 TPTRKKQVSKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFG 870
Query: 67 FVEFITKNEAKRV 79
FV+F+TK +AK+
Sbjct: 871 FVDFVTKQDAKKA 883
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQ 56
>gi|332250675|ref|XP_003274476.1| PREDICTED: probable RNA-binding protein 19 [Nomascus leucogenys]
Length = 997
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 853 AVTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 912
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 913 FGFVDFLTKQDAKRA 927
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 39 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 95
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
++ VRN+P+ + + ++E+LF +G L + P + + +GFGFV F+
Sbjct: 440 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFGFVTFM 488
>gi|426374260|ref|XP_004053996.1| PREDICTED: probable RNA-binding protein 19 [Gorilla gorilla
gorilla]
Length = 960
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 816 AMTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 875
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 876 FGFVDFLTKQDAKRA 890
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 58
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK--MVGSGLHRGFGFVEFITKNEAK 77
G + ++N+ F + +++E+F G +K + KK G+ L GFGFVE+ +A+
Sbjct: 729 GCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQ 788
Query: 78 RV 79
+
Sbjct: 789 KA 790
>gi|291407017|ref|XP_002719829.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Oryctolagus cuniculus]
Length = 1025
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 790 ALTSARKKQVPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRG 849
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 850 FGFVDFLTKQDAKRA 864
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF+AFG L L K G R FGF+ F +++EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFEAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEDEAR 56
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++ VRN+P+ + + ++E+LF +G L + P + + +GF FV F+ A
Sbjct: 377 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFVTFMMPEHA 430
>gi|403281594|ref|XP_003932266.1| PREDICTED: probable RNA-binding protein 19 [Saimiri boliviensis
boliviensis]
Length = 960
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 816 AMTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 875
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 876 FGFVDFLTKQDAKRA 890
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F T+ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKTEEEAQKA 58
>gi|426247328|ref|XP_004017438.1| PREDICTED: probable RNA-binding protein 19 [Ovis aries]
Length = 916
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK+ G+G HRG
Sbjct: 772 ALTAARKKQAPRKQTTSKILVRNIPFQADSHEIRELFSTFGELKTVRLPKKVTGTGTHRG 831
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 832 FGFVDFLTKQDAKRA 846
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQ 56
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
++ VRN+P+ + + ++E+LF +G L + P + + +GF FV F+
Sbjct: 361 RLFVRNLPYTSSEEDLEKLFSRYGPLSELHYPIDSL-TKKPKGFAFVTFM 409
>gi|432094975|gb|ELK26383.1| Putative RNA-binding protein 19 [Myotis davidii]
Length = 966
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 822 ALTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGAHRG 881
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 882 FGFVDFLTKQDAKRA 896
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+R
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQRA 58
>gi|417405465|gb|JAA49443.1| Putative rna-binding protein rrm superfamily [Desmodus rotundus]
Length = 968
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 815 ALTSTRKKQVPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMAGTGSHRG 874
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 875 FGFVDFLTKQDAKRA 889
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ ++LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFKQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQQA 58
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
++ VRN+P+ + + ++E+LF FG L + P + + +GF FV F+
Sbjct: 405 RLFVRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSL-TKKPKGFAFVTFM 453
>gi|431914230|gb|ELK15488.1| Putative RNA-binding protein 19 [Pteropus alecto]
Length = 949
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 56/75 (74%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA + E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 818 ALTSTRKKQVARKQTTSKILVRNIPFQADRREIRELFSTFGELKTVRLPKKMAGTGTHRG 877
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F++K +AKR
Sbjct: 878 FGFVDFLSKQDAKRA 892
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+R
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFGAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQRA 58
>gi|440906208|gb|ELR56498.1| Putative RNA-binding protein 19 [Bos grunniens mutus]
Length = 947
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK+ G+G HRG
Sbjct: 803 ALTSARKKQAPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRG 862
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 863 FGFVDFLTKQDAKRA 877
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQ 56
>gi|114051910|ref|NP_001039420.1| probable RNA-binding protein 19 [Bos taurus]
gi|88954099|gb|AAI14030.1| RNA binding motif protein 19 [Bos taurus]
Length = 920
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK+ G+G HRG
Sbjct: 776 ALTSARKKQAPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRG 835
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 836 FGFVDFLTKQDAKRA 850
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQ 56
>gi|148228969|ref|NP_001088073.1| RNA binding motif protein 19 [Xenopus laevis]
gi|52354760|gb|AAH82875.1| LOC494769 protein [Xenopus laevis]
Length = 920
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 57/75 (76%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
AT+++RK KQ SKILVRN+PFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 781 ATSMERKKQISKKQQSSKILVRNVPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRG 840
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 841 FGFVDFVTKQDAKRA 855
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ ELF AFG L L K G R FGF+ F+++ EAK
Sbjct: 2 SRLIVKNLPNGIKEDRFRELFAAFGTLTDCSL--KYTKDGKFRKFGFIGFVSEEEAK 56
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
ILV+N+P K +E++ELF FG+L V LP+ + + +EF+ EAKR
Sbjct: 572 ILVKNLPAGTKPAELQELFGRFGDLGRVLLPEGGISA-------VMEFLEPTEAKRA 621
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKNEAK 77
G + ++N+ F + ++E+F G +K + KK SG L GFGFVE++ +A+
Sbjct: 694 GCTLFIKNLNFSTSEETLKEVFSKVGTVKSCSISKKKDKSGSLLSMGFGFVEYMKPEQAQ 753
Query: 78 RV 79
+
Sbjct: 754 KA 755
>gi|351694750|gb|EHA97668.1| Putative RNA-binding protein 19 [Heterocephalus glaber]
Length = 955
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 811 ALTSSRKKQVPRKQTTSKILVRNIPFQASLREIRELFSTFGELKTVRLPKKMTGTGAHRG 870
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 871 FGFVDFLTKQDAKRA 885
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+R
Sbjct: 2 SRLIVKNLPSGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEVEAQRA 58
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
++ VRN+P+ + + ++E+LF +G L + P + + +GF FV F+
Sbjct: 398 RLFVRNLPYTSTEEDLEKLFSTYGPLSELHFPIDSL-TKKPKGFAFVTFL 446
>gi|410976696|ref|XP_003994750.1| PREDICTED: probable RNA-binding protein 19 [Felis catus]
Length = 994
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 808 ALTSARKKQVPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMSGTGSHRG 867
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 868 FGFVDFLTKQDAKRA 882
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
++ VRN+P+ + + ++E+LF FG L + P + + +GF FV F+
Sbjct: 396 RLFVRNLPYSSTEEDLEQLFSRFGPLSELHYPIDSL-TKKPKGFAFVTFM 444
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF +FG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFASFGALTDCSL--KFTKDGKFRKFGFIGFKSEEEAR 56
>gi|159163840|pdb|2CPH|A Chain A, Solution Structure Of The C-Terminal Rna Recognition
Motif Of Hypothetical Rna-Binding Protein Rbm19
Length = 107
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 52/63 (82%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
KQT SKILVRNIPFQA Q E+ ELF FGELK VRLPKKM G+G HRGFGFV+FITK +A
Sbjct: 12 KQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDA 71
Query: 77 KRV 79
K+
Sbjct: 72 KKA 74
>gi|307180956|gb|EFN68744.1| Probable RNA-binding protein 19 [Camponotus floridanus]
Length = 903
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
+ S+ TV RK S V +QT SKILVRNIPFQA E+ ELFK++GELK VRLPKK+VG+
Sbjct: 761 LMSDVKTV-RKKSKVTEQTSSKILVRNIPFQATLQEITELFKSYGELKAVRLPKKLVGTE 819
Query: 61 LHRGFGFVEFITKNEAKRV 79
HRGFGF+E+ TK +AK+
Sbjct: 820 KHRGFGFIEYYTKTDAKKA 838
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K++ + IL++N+P Q K SE+ E+F GEL + +P + + VEF+ +EA
Sbjct: 542 KRSTTIILIKNLPAQTKSSEIREMFAKHGELARIVMPPAGITA-------LVEFLEPSEA 594
Query: 77 KRV 79
++
Sbjct: 595 RKA 597
>gi|449268059|gb|EMC78930.1| putative RNA-binding protein 19, partial [Columba livia]
Length = 922
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 7 TVK--RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
TVK RK V KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 810 TVKSSRKKQTVKKQTTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRG 869
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AK+
Sbjct: 870 FGFVDFLTKQDAKKA 884
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ + +++EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRKLFAAFGTLTDCCL--KFTKDGKFRKFGFIGYKSEDEAQ 56
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++ VRN+PF + + ++E++F +G L + P + + +GF FV ++ A
Sbjct: 407 RLFVRNLPFTSTEEDLEKIFSKYGPLSDIHFPIDRL-TKKPKGFAFVTYMIPEHA 460
>gi|327282636|ref|XP_003226048.1| PREDICTED: probable RNA-binding protein 19-like isoform 2 [Anolis
carolinensis]
Length = 938
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 56/73 (76%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T RK+ + KQ SKILVRNIPFQA E+ ELF FGELK VRLPKKMVG+G HRGFG
Sbjct: 798 TSTRKTQRLKKQKSSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFG 857
Query: 67 FVEFITKNEAKRV 79
FV+F+TK +AK+
Sbjct: 858 FVDFLTKQDAKQA 870
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ LF AFG L L K G R FGF+ F ++++AK
Sbjct: 2 SRLIVKNLPSGMKEDRFRGLFAAFGTLTDCAL--KFTKDGKFRKFGFIGFKSEDDAK 56
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S ++++ + ILV+N+P + + +EE+F A+G L V LP+ V + VEF+
Sbjct: 575 SQAASERSKTVILVKNLPAGTEATALEEVFGAYGSLGRVLLPEGGVTA-------IVEFL 627
Query: 72 TKNEAKRV 79
EAKR
Sbjct: 628 EPTEAKRA 635
>gi|327282634|ref|XP_003226047.1| PREDICTED: probable RNA-binding protein 19-like isoform 1 [Anolis
carolinensis]
Length = 945
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 56/73 (76%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T RK+ + KQ SKILVRNIPFQA E+ ELF FGELK VRLPKKMVG+G HRGFG
Sbjct: 805 TSTRKTQRLKKQKSSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFG 864
Query: 67 FVEFITKNEAKRV 79
FV+F+TK +AK+
Sbjct: 865 FVDFLTKQDAKQA 877
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S ++++ + ILV+N+P + + +EE+F A+G L V LP+ V + VEF+
Sbjct: 575 SQAASERSKTVILVKNLPAGTEATALEEVFGAYGSLGRVLLPEGGVTA-------IVEFL 627
Query: 72 TKNEAKRV 79
EAKR
Sbjct: 628 EPTEAKRA 635
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ LF AFG L L K G R FGF+ F ++++AK
Sbjct: 2 SRLIVKNLPSGMKEDRFRGLFAAFGTLTDCAL--KFTKDGKFRKFGFIGFKSEDDAK 56
>gi|380818506|gb|AFE81126.1| putative RNA-binding protein 19 [Macaca mulatta]
gi|383412169|gb|AFH29298.1| putative RNA-binding protein 19 [Macaca mulatta]
Length = 960
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 54/75 (72%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK QT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 816 AVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 875
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 876 FGFVDFLTKQDAKRA 890
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 58
>gi|355786561|gb|EHH66744.1| hypothetical protein EGM_03792 [Macaca fascicularis]
Length = 960
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 54/75 (72%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK QT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 816 AVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 875
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 876 FGFVDFLTKQDAKRA 890
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 58
>gi|194214277|ref|XP_001492007.2| PREDICTED: probable RNA-binding protein 19 [Equus caballus]
Length = 962
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK+ G+G HRG
Sbjct: 818 ALTSARKKQVPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGSHRG 877
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 878 FGFVDFLTKQDAKRA 892
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFSAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQ 56
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
++ VRN+P+ + + E+E+LF +G L + P + + +GF FV F+ A R
Sbjct: 405 RLFVRNLPYTSTEEELEQLFSRYGPLSELHYPIDGL-TKKPKGFAFVTFMFPEHAVRA 461
>gi|355564713|gb|EHH21213.1| hypothetical protein EGK_04225 [Macaca mulatta]
Length = 960
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 54/75 (72%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK QT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 816 AVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 875
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 876 FGFVDFLTKQDAKRA 890
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 58
>gi|383847362|ref|XP_003699323.1| PREDICTED: probable RNA-binding protein 19-like [Megachile
rotundata]
Length = 886
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 58/73 (79%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T +K+S V +QTG+KIL+RN+PFQA E+ ELFKAFGELK VRLP+K+VG HRGFG
Sbjct: 753 TNAKKTSKVTEQTGTKILIRNVPFQANVHEITELFKAFGELKAVRLPRKLVGVEKHRGFG 812
Query: 67 FVEFITKNEAKRV 79
FVE+ TK EAK+
Sbjct: 813 FVEYYTKGEAKKA 825
>gi|297693058|ref|XP_002823848.1| PREDICTED: probable RNA-binding protein 19 [Pongo abelii]
Length = 999
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK+ G+G HRG
Sbjct: 855 AVTSARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGTHRG 914
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 915 FGFVDFLTKQDAKRA 929
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 40 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 96
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK--MVGSGLHRGFGFVEFITKNEAK 77
G + ++N+ F + +++E+F G +K + KK G+ L GFGFVE+ +A+
Sbjct: 768 GCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQ 827
Query: 78 RV 79
+
Sbjct: 828 KA 829
>gi|109098882|ref|XP_001106082.1| PREDICTED: probable RNA-binding protein 19 [Macaca mulatta]
Length = 998
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 54/75 (72%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK QT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 854 AVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 913
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 914 FGFVDFLTKQDAKRA 928
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 40 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 96
>gi|402887773|ref|XP_003907256.1| PREDICTED: probable RNA-binding protein 19 [Papio anubis]
Length = 998
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 54/75 (72%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T RK QT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 854 AVTSARKKQVPRTQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRG 913
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 914 FGFVDFLTKQDAKRA 928
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA++
Sbjct: 40 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQKA 96
>gi|157139408|ref|XP_001647574.1| RNA binding motif protein [Aedes aegypti]
gi|108865819|gb|EAT32242.1| AAEL015645-PA [Aedes aegypti]
Length = 263
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
+ +EA T RK+S + KQTG+KILVRN+PFQA E+ +LFK FGELK VRLP+KMV S
Sbjct: 103 LNTEADTHGRKASKLKKQTGTKILVRNVPFQANAKEIRDLFKVFGELKSVRLPRKMVSSA 162
Query: 61 --LHRGFGFVEFITKNEAKRV 79
HRGF FV+F+T+N+AK+
Sbjct: 163 DESHRGFCFVDFVTENDAKQA 183
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL-PKKMVGSGLHRGFGF 67
K + S+++ + G+ + ++N+ FQ + + E F+ G + V++ +K G RG+GF
Sbjct: 9 KDEYSDLSPEEGTTLFLKNLSFQTNEESIRETFRNMGPIHSVQVVRRKDGGKNESRGYGF 68
Query: 68 VEF 70
++F
Sbjct: 69 IQF 71
>gi|157104329|ref|XP_001648356.1| RNA binding motif protein [Aedes aegypti]
gi|108880340|gb|EAT44565.1| AAEL004075-PA [Aedes aegypti]
Length = 860
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
+ +EA T RK+S + KQTG+KILVRN+PFQA E+ +LFK FGELK VRLP+KMV S
Sbjct: 700 LNTEADTHGRKASKLKKQTGTKILVRNVPFQANAKEIRDLFKVFGELKSVRLPRKMVSSA 759
Query: 61 --LHRGFGFVEFITKNEAKRV 79
HRGF FV+F+T+N+AK+
Sbjct: 760 DESHRGFCFVDFVTENDAKQA 780
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL-PKKMVGSGLHRGFGF 67
K + S+++ + G+ + ++N+ FQ + + E F+ G + V++ +K G RG+GF
Sbjct: 606 KDEYSDLSPEEGTTLFLKNLSFQTNEESIRETFRNMGPIHSVQVVRRKDGGKNESRGYGF 665
Query: 68 VEF 70
++F
Sbjct: 666 IQF 668
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 54/73 (73%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T R+ KQ SKILVRNIPFQA + E+ ELF FGELK VRLPKKM G+G HRGFG
Sbjct: 805 TSARQRQTAHKQKTSKILVRNIPFQANKQEIRELFSTFGELKTVRLPKKMTGTGPHRGFG 864
Query: 67 FVEFITKNEAKRV 79
FV+F+TK +AKR
Sbjct: 865 FVDFLTKQDAKRA 877
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPSGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQ 56
>gi|350407885|ref|XP_003488228.1| PREDICTED: probable RNA-binding protein 19-like [Bombus impatiens]
Length = 900
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 56/70 (80%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+K+S V QTG+KIL+RN+PFQA EV ELFKAFGELK VRLPKK+VG HRGF FVE
Sbjct: 768 KKTSTVTAQTGTKILIRNVPFQATVEEVTELFKAFGELKAVRLPKKLVGVEKHRGFAFVE 827
Query: 70 FITKNEAKRV 79
+ TK+EAK+
Sbjct: 828 YYTKSEAKKA 837
>gi|328791232|ref|XP_624611.3| PREDICTED: probable RNA-binding protein 19-like [Apis mellifera]
Length = 889
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 56/70 (80%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+K+S V QTG+KIL+RN+PFQA E+ ELFKAFGELK VRLPKK+VG HRGF FVE
Sbjct: 759 KKTSTVKAQTGTKILIRNVPFQATAEEITELFKAFGELKAVRLPKKLVGVEKHRGFAFVE 818
Query: 70 FITKNEAKRV 79
+ TK+EAK+
Sbjct: 819 YYTKSEAKKA 828
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++ +RN+ + + ++ +LF+ +G L V LP + L +GFG + F+ A
Sbjct: 357 RMFIRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKL-KGFGTITFLMTEHA 410
>gi|340721943|ref|XP_003399372.1| PREDICTED: probable RNA-binding protein 19-like [Bombus terrestris]
Length = 901
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 56/70 (80%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+K+S V QTG+KIL+RN+PFQA EV ELFKAFGELK VRLPKK+VG HRGF FVE
Sbjct: 769 KKTSKVTAQTGTKILIRNVPFQATVEEVTELFKAFGELKAVRLPKKLVGVEKHRGFAFVE 828
Query: 70 FITKNEAKRV 79
+ TK+EAK+
Sbjct: 829 YYTKSEAKKA 838
>gi|380018594|ref|XP_003693212.1| PREDICTED: probable RNA-binding protein 19-like [Apis florea]
Length = 900
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 56/70 (80%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+K+S V QTG+KIL+RN+PFQA E+ ELFKAFGELK VRLPKK+VG HRGF FVE
Sbjct: 770 KKTSTVKAQTGTKILIRNVPFQATAEEITELFKAFGELKAVRLPKKLVGVEKHRGFAFVE 829
Query: 70 FITKNEAKRV 79
+ TK+EAK+
Sbjct: 830 YYTKSEAKKA 839
>gi|332024948|gb|EGI65135.1| Putative RNA-binding protein 19 [Acromyrmex echinatior]
Length = 862
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 57/70 (81%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
RK S + +QTG+KILVRNIPFQA EV ELFK++GELK VRLPKK+VG+ HRGF F+E
Sbjct: 727 RKKSKITEQTGTKILVRNIPFQATVQEVTELFKSYGELKAVRLPKKLVGTEKHRGFAFIE 786
Query: 70 FITKNEAKRV 79
+ TK++AK+
Sbjct: 787 YYTKSDAKKA 796
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K++ + ILV+N+P + K +E++E+F GEL + LP + + VEF+ EA
Sbjct: 501 KRSSTIILVKNLPAETKPNELQEMFAKHGELARIILPPAGITA-------LVEFLEPFEA 553
Query: 77 KRV 79
++
Sbjct: 554 RKA 556
>gi|307192625|gb|EFN75799.1| Probable RNA-binding protein 19 [Harpegnathos saltator]
Length = 863
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 55/70 (78%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
RK S + +QTG+KILVRN+PFQAK E+ ELFKAFGELK RLP+K+VG HRGF F+E
Sbjct: 732 RKKSKITEQTGTKILVRNVPFQAKAEEITELFKAFGELKATRLPRKLVGFEKHRGFAFIE 791
Query: 70 FITKNEAKRV 79
+ TK +AKR
Sbjct: 792 YHTKEDAKRA 801
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+++ + ILV+N+P Q K +++ E+F GEL + LP SG+ VEF+ +EA
Sbjct: 503 QRSNTVILVKNLPAQTKPADIREMFVKHGELGRIVLP----PSGIT---ALVEFLEPSEA 555
Query: 77 KRV 79
++
Sbjct: 556 RKA 558
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++ +RN+ + + +V +LF+ +G L V LP V L +GFG V F+ A
Sbjct: 324 RMFIRNLTYTTTEDDVRKLFEKYGPLSEVNLPVDKVTRRL-KGFGTVTFLMPEHA 377
>gi|432874359|ref|XP_004072458.1| PREDICTED: probable RNA-binding protein 19-like [Oryzias latipes]
Length = 921
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 55/73 (75%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T ++K KQTGSKILVRN+PFQA E+ ELF FGELK VRLPKK GSG HRGFG
Sbjct: 784 TSRKKKQAEKKQTGSKILVRNVPFQATVREIRELFCTFGELKTVRLPKKAAGSGNHRGFG 843
Query: 67 FVEFITKNEAKRV 79
FV+FITK +AK+
Sbjct: 844 FVDFITKQDAKKA 856
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S A ++ + ILV+N+P SE+EELF G L V LP SGL +EF+
Sbjct: 576 SQAAAARSTTVILVKNLPAGVTTSELEELFSPHGSLGRVLLPP----SGL---TAIIEFL 628
Query: 72 TKNEAKRV 79
EAKR
Sbjct: 629 EPTEAKRA 636
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKNEAK 77
GS + ++N+ F + +++E F G++KF + KK SG L G+GFV++ + A+
Sbjct: 695 GSTLFIKNLSFITTEEKLQETFSKCGKVKFCSISKKKDKSGKLLSMGYGFVQYQSAEGAQ 754
Query: 78 RV 79
+
Sbjct: 755 KA 756
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +F AFG + L K G R FGFV F ++ +A R
Sbjct: 2 SRLIVKNLPNGMKEERFSSMFAAFGTVTDCSL--KFTKDGKFRKFGFVGFKSEEDASRA 58
>gi|348528569|ref|XP_003451789.1| PREDICTED: probable RNA-binding protein 19 [Oreochromis niloticus]
Length = 926
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 55/75 (73%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A ++K KQTGSKILVRN+PFQA E+ ELF FGELK VRLPKK GSG HRG
Sbjct: 787 AVVTRKKKQADKKQTGSKILVRNVPFQASVREIRELFCTFGELKTVRLPKKAAGSGSHRG 846
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AK+
Sbjct: 847 FGFVDFLTKQDAKKA 861
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S A ++ + ILV+N+P + SE+EELF +G L V LP SGL VEF+
Sbjct: 576 SQAAAARSNTVILVKNLPAGVQASELEELFSPYGSLGRVLLPP----SGLT---AIVEFL 628
Query: 72 TKNEAKRV 79
EAKR
Sbjct: 629 EPTEAKRA 636
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +F AFG L L K G R FGFV F ++ +A +
Sbjct: 2 SRLIVKNLPNGMKEDRFRSMFAAFGTLTDCSL--KFTKDGKFRKFGFVGFKSEEDANKA 58
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKNEAK 77
GS + ++N+ F + ++ E F G++K + KK +G L G+GFV++ T A+
Sbjct: 700 GSTLFIKNLNFNTTEEKLLETFSKCGKVKSCTISKKKDKTGKLLSMGYGFVQYQTAEAAQ 759
Query: 78 RV 79
+
Sbjct: 760 KA 761
>gi|60098573|emb|CAH65117.1| hypothetical protein RCJMB04_3n1 [Gallus gallus]
Length = 621
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 53/70 (75%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
RK V KQ SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRGFGFV+
Sbjct: 484 RKKQMVKKQKTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVD 543
Query: 70 FITKNEAKRV 79
F+TK +AK+
Sbjct: 544 FLTKQDAKKA 553
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++ VRN+PF + + ++E++F +G L + P + + +GF F+ ++ A
Sbjct: 79 RLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRL-TKKPKGFAFITYMIPEHA 132
>gi|348551182|ref|XP_003461409.1| PREDICTED: probable RNA-binding protein 19-like [Cavia porcellus]
Length = 961
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 50/63 (79%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
KQT SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRGFGFV+F TK +A
Sbjct: 829 KQTTSKILVRNIPFQADLREIRELFSTFGELKTVRLPKKMAGTGRHRGFGFVDFFTKQDA 888
Query: 77 KRV 79
KR
Sbjct: 889 KRA 891
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+R
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSL--KFTKDGQFRKFGFIGFKSEAEAQRA 58
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
++ VRN+P+ + + ++E+LF A+G L + P + + +GF FV F+
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSAYGPLSELHYPIDTL-TKKPKGFAFVTFL 451
>gi|126324467|ref|XP_001378428.1| PREDICTED: probable RNA-binding protein 19 [Monodelphis domestica]
Length = 969
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 54/75 (72%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T R+ KQ SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRG
Sbjct: 799 ALTSARQKQVARKQRTSKILVRNIPFQANVREIRELFSTFGELKTVRLPKKMTGTGPHRG 858
Query: 65 FGFVEFITKNEAKRV 79
FGFV+F+TK +AKR
Sbjct: 859 FGFVDFLTKQDAKRA 873
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+R
Sbjct: 2 SRLIVKNLPSGMKEERFRQLFAAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQRA 58
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S +++ S ILV+N+P + SE++ELF FG L V LP+ + + VE++
Sbjct: 564 SQAAGERSRSVILVKNLPSGTRPSELQELFGRFGSLGRVLLPEGGITA-------IVEYL 616
Query: 72 TKNEAKR 78
EA+R
Sbjct: 617 EPLEARR 623
>gi|322787083|gb|EFZ13307.1| hypothetical protein SINV_16564 [Solenopsis invicta]
Length = 859
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 55/70 (78%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
RK S + +Q G+KILVRNIPFQA EV ELFK++GELK VRLPKK++G+ HRGF F+E
Sbjct: 724 RKKSKITEQNGTKILVRNIPFQATIQEVTELFKSYGELKAVRLPKKLIGTEKHRGFAFIE 783
Query: 70 FITKNEAKRV 79
+ TK +AK+
Sbjct: 784 YYTKTDAKKA 793
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K++ + ILV+N+P + K +E++E F GEL + +P + + VEF+ +EA
Sbjct: 495 KRSNTIILVKNLPAETKPNELQERFAKHGELARIVMPPAGITA-------LVEFLEPSEA 547
Query: 77 KRV 79
++
Sbjct: 548 RKA 550
>gi|427792715|gb|JAA61809.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 841
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A ++K +++ K+ G+KILVRNIPFQA Q EV++LF FG L+ +RLP+KM G HRG
Sbjct: 697 AAAQRKKVTDIGKE-GTKILVRNIPFQANQKEVQDLFSVFGTLRGIRLPRKMAAGGRHRG 755
Query: 65 FGFVEFITKNEAKRV 79
FGFVEF+TKN+AKR
Sbjct: 756 FGFVEFLTKNDAKRA 770
>gi|449477354|ref|XP_002196178.2| PREDICTED: probable RNA-binding protein 19 [Taeniopygia guttata]
Length = 944
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 52/70 (74%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
RK KQ SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRGFGFV+
Sbjct: 807 RKKQIAKKQKTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVD 866
Query: 70 FITKNEAKRV 79
F+TK +AK+
Sbjct: 867 FVTKQDAKKA 876
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ + +++EA+
Sbjct: 2 SRLIVKNLPSGMKEERFRKLFAAFGTLTDCCL--KYTKDGRFRKFGFIGYKSEDEAQ 56
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++ VRN+PF + + ++E++F +G L + P + + +GF F+ ++ A
Sbjct: 404 RLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDKL-TKKPKGFAFITYMIPEHA 457
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM--VGSGLHRGFGFVEFITKNEAK 77
G + ++N+ F + ++E F G LK + KK G+ L GFGFVE+ A+
Sbjct: 715 GCTLFIKNLNFATTEDTLKETFSKVGALKSCTISKKKDKAGTLLSMGFGFVEYKKPESAQ 774
Query: 78 RV 79
+
Sbjct: 775 KA 776
>gi|410923148|ref|XP_003975044.1| PREDICTED: probable RNA-binding protein 19-like [Takifugu rubripes]
Length = 941
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 51/63 (80%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
KQTG+KIL RNIPFQA E+ ELF FGELK VRLPKK GSG HRGFGF++F+TK++A
Sbjct: 814 KQTGTKILARNIPFQASVRELRELFCTFGELKTVRLPKKAAGSGNHRGFGFIDFVTKHDA 873
Query: 77 KRV 79
K+
Sbjct: 874 KKA 876
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S A+++ + ILV+N+P SE+EELF A G L V LP SGL VEF+
Sbjct: 591 SQAAAQRSTTVILVKNLPAGVASSELEELFSAHGSLGRVLLPP----SGL---TAIVEFL 643
Query: 72 TKNEAKRV 79
EAKR
Sbjct: 644 EPTEAKRA 651
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ + +F AFG + L K G R FGFV F ++ EA R
Sbjct: 2 SRLIVKNLPNGMKEERFKSMFAAFGTVTDCSL--KFTKDGKFRKFGFVGFRSEEEANRA 58
>gi|443723982|gb|ELU12200.1| hypothetical protein CAPTEDRAFT_225018 [Capitella teleta]
Length = 891
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 58/79 (73%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
M ++ +RK + V + SKILVRNIPF+AKQ EV++LF FGELK RLP+K+ GSG
Sbjct: 748 MTAKQQIAQRKKTQVLGKASSKILVRNIPFEAKQDEVKQLFSVFGELKTARLPRKLAGSG 807
Query: 61 LHRGFGFVEFITKNEAKRV 79
HRGF FV+F++K +A+R
Sbjct: 808 QHRGFAFVDFLSKEDAQRA 826
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
++ VRN+ + K+ ++E+LF +G L V LP + +GF FV F+
Sbjct: 366 RLYVRNLAYCCKEDDLEQLFTKYGTLSEVHLPIDSFTKKV-KGFAFVSFM 414
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM----VGSGLHRGFGFVEFITKNE 75
G + V+NI F+ + + +LF G + + KK GS L GFGFVE+
Sbjct: 663 GCSVFVKNINFETQDDALHKLFSKCGRIISASVSKKKDIKNPGSMLSMGFGFVEYAKPES 722
Query: 76 AKRV 79
A++
Sbjct: 723 AQKA 726
>gi|241147227|ref|XP_002405304.1| RNA binding motif protein, putative [Ixodes scapularis]
gi|215493703|gb|EEC03344.1| RNA binding motif protein, putative [Ixodes scapularis]
Length = 597
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A +KRK +++ K++ +KILVRNIPF+A + E++ELF FG L+ +RLPKKM G+G HRG
Sbjct: 482 AAELKRKKTDLGKES-TKILVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRG 540
Query: 65 FGFVEFITKNEAKRV 79
F FV+F+TKN+AKR
Sbjct: 541 FAFVDFLTKNDAKRA 555
>gi|442749963|gb|JAA67141.1| Putative rna-binding protein rrm superfamily [Ixodes ricinus]
Length = 863
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A +KRK +++ K++ +KILVRNIPF+A + E++ELF FG L+ +RLPKKM G+G HRG
Sbjct: 722 AAELKRKKTDLGKES-TKILVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRG 780
Query: 65 FGFVEFITKNEAKRV 79
F FV+F+TKN+AKR
Sbjct: 781 FAFVDFLTKNDAKRA 795
>gi|405963583|gb|EKC29145.1| Putative RNA-binding protein 19 [Crassostrea gigas]
Length = 878
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 50/57 (87%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
ILVRNIPF+AK+ E+ ELFK FGELKFVRLPKKM G+G HRGFGFV+F+T+ +AKR
Sbjct: 781 ILVRNIPFEAKKQEIYELFKVFGELKFVRLPKKMGGTGSHRGFGFVDFLTRQDAKRA 837
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+TG ++ VRN+ + Q ++EELF FG + V L + + RG+ F+ F+ A
Sbjct: 370 ETG-RLFVRNLAYNCTQEDLEELFGKFGPIAEVHLSIDTITKKI-RGYAFILFMMPEHAV 427
Query: 78 RV 79
R
Sbjct: 428 RA 429
>gi|195439120|ref|XP_002067479.1| GK16446 [Drosophila willistoni]
gi|194163564|gb|EDW78465.1| GK16446 [Drosophila willistoni]
Length = 929
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GSGLH 62
E + +R+ + KQTG+KILVRNIPFQA+ EV ++FKAFGEL +R+PKKM G H
Sbjct: 775 EQESSRRRQGSQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELTSLRIPKKMAPGEDAH 834
Query: 63 RGFGFVEFITKNEAKRV 79
RGFGFV+F+TK +AKR
Sbjct: 835 RGFGFVDFVTKADAKRA 851
>gi|390354769|ref|XP_003728404.1| PREDICTED: probable RNA-binding protein 19-like [Strongylocentrotus
purpuratus]
Length = 384
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 52/70 (74%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
RK KQ +KILVRNIPF+A E+ ELF FGE+K VRLPKKM G+G HRGFGFV+
Sbjct: 253 RKKQKAKKQMSTKILVRNIPFEASSREIRELFITFGEVKTVRLPKKMSGTGSHRGFGFVD 312
Query: 70 FITKNEAKRV 79
F++K +AKR
Sbjct: 313 FLSKQDAKRA 322
>gi|326930082|ref|XP_003211181.1| PREDICTED: probable RNA-binding protein 19-like [Meleagris
gallopavo]
Length = 746
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 48/59 (81%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRGFGFV+F+TK +AK+
Sbjct: 620 SKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKA 678
>gi|226533389|ref|NP_001034357.2| RNA binding motif protein 19 [Gallus gallus]
Length = 957
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 48/59 (81%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
SKILVRNIPFQA E+ ELF FGELK VRLPKKM G+G HRGFGFV+F+TK +AK+
Sbjct: 831 SKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKA 889
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ + +++EA+
Sbjct: 2 SRLIVKNLPNGMKEDRFRKLFAAFGTLTDCCL--KFTKDGKFRKFGFIGYKSEDEAQ 56
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++ VRN+PF + + ++E++F +G L + P + + +GF F+ ++ A
Sbjct: 415 RLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRL-TKKPKGFAFITYMIPEHA 468
>gi|38707995|ref|NP_944597.1| probable RNA-binding protein 19 [Danio rerio]
gi|32450902|gb|AAP82506.1| nil per os [Danio rerio]
Length = 926
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
KRK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK +G G HRGFGF
Sbjct: 791 AKRKKQTARKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIG-GSHRGFGF 849
Query: 68 VEFITKNEAKRV 79
++F+TK +AK+
Sbjct: 850 IDFLTKQDAKKA 861
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ ++F FG L L K G R FGFV F T+ +A++
Sbjct: 2 SRLIVKNLPNGMKEERFRKMFADFGTLTDCAL--KFTKDGKFRKFGFVGFKTEEDAQKA 58
>gi|190337757|gb|AAI63877.1| RNA binding motif protein 19 [Danio rerio]
Length = 926
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
KRK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK +G G HRGFGF
Sbjct: 791 AKRKKQTARKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIG-GSHRGFGF 849
Query: 68 VEFITKNEAKRV 79
++F+TK +AK+
Sbjct: 850 IDFLTKQDAKKA 861
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ ++F FG L L K G R FGFV F T+ +A++
Sbjct: 2 SRLIVKNLPNGMKEDRFRKMFADFGTLTDCAL--KFTKDGKFRKFGFVGFKTEEDAQKA 58
>gi|49619013|gb|AAT68091.1| KIAA0682-like [Danio rerio]
Length = 927
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
KRK KQT SKILVRNIPFQA E+ ELF FGELK VRLPKK +G G HRGFGF
Sbjct: 792 AKRKKQTARKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIG-GSHRGFGF 850
Query: 68 VEFITKNEAKRV 79
++F+TK +AK+
Sbjct: 851 IDFLTKQDAKKA 862
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ ++F FG L L K G R FGFV F T+ +A++
Sbjct: 2 SRLIVKNLPNGMKEDRFRKMFADFGTLTDCAL--KFTKDGKFRKFGFVGFKTEEDAQKA 58
>gi|195042706|ref|XP_001991484.1| GH12037 [Drosophila grimshawi]
gi|193901242|gb|EDW00109.1| GH12037 [Drosophila grimshawi]
Length = 918
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFG 66
+R+ KQTG+KILVRNIPFQA+ EV E+FKAFGEL +R+PKKM G HRGFG
Sbjct: 775 ARRRQVGQKKQTGTKILVRNIPFQAQYREVREIFKAFGELTSLRIPKKMTPGEDAHRGFG 834
Query: 67 FVEFITKNEAKRV 79
FV++ TK +AKR
Sbjct: 835 FVDYTTKADAKRA 847
>gi|195396387|ref|XP_002056813.1| GJ16680 [Drosophila virilis]
gi|194146580|gb|EDW62299.1| GJ16680 [Drosophila virilis]
Length = 915
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFG 66
+R+ KQTG+KILVRNIPFQA EV ++FKAFGEL +RLPKKM G HRGFG
Sbjct: 771 ARRRQVAQKKQTGTKILVRNIPFQAHYREVRDIFKAFGELTSLRLPKKMTPGEDAHRGFG 830
Query: 67 FVEFITKNEAKRV 79
FV+F TK +AKR
Sbjct: 831 FVDFTTKADAKRA 843
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
R N++ +I RN+ + + E+++LF+ FG + V LP V + +GFG V
Sbjct: 355 RSEENISD--SGRIFFRNLAYTTTEEELQQLFEPFGPVVEVNLPVDKVTRQI-KGFGTVT 411
Query: 70 FITKNEA 76
F+ A
Sbjct: 412 FMMPEHA 418
>gi|213511062|ref|NP_001133976.1| probable RNA-binding protein 19 [Salmo salar]
gi|209156026|gb|ACI34245.1| Probable RNA-binding protein 19 [Salmo salar]
Length = 912
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM--VGS 59
+++ V RK KQT SKILVRN+PFQA E+ ELF FGELK VRLPKK G+
Sbjct: 768 ATKSAIVSRKKQAERKQTSSKILVRNVPFQATVREIRELFCTFGELKTVRLPKKASGTGT 827
Query: 60 GLHRGFGFVEFITKNEAKRV 79
G HRGFGFV+F+TK +AK+
Sbjct: 828 GPHRGFGFVDFLTKQDAKKA 847
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ +E+F AFG L L K G R FGFV F T+ A +
Sbjct: 2 SRLIVKNLPNGMKEERFKEMFAAFGTLTDCGL--KFTKEGKFRKFGFVGFKTEEHADKA 58
>gi|195175692|ref|XP_002028560.1| GL16640 [Drosophila persimilis]
gi|194104901|gb|EDW26944.1| GL16640 [Drosophila persimilis]
Length = 928
Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFGFVEFITKNE 75
KQTG+KILVRNIPFQA+ EV E+FKAFGEL+ +R+PKK+ G HRGFGFV+FITK +
Sbjct: 782 KQTGTKILVRNIPFQAQYREVLEVFKAFGELRSLRIPKKVTAGEDAHRGFGFVDFITKAD 841
Query: 76 AKRV 79
AKR
Sbjct: 842 AKRA 845
>gi|198470219|ref|XP_002133396.1| GA22839 [Drosophila pseudoobscura pseudoobscura]
gi|198145347|gb|EDY72024.1| GA22839 [Drosophila pseudoobscura pseudoobscura]
Length = 927
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFGFVEFITKNE 75
KQTG+KILVRNIPFQA+ EV E+FKAFGEL+ +R+PKK+ G HRGFGFV+FITK +
Sbjct: 781 KQTGTKILVRNIPFQAQYREVLEVFKAFGELRSLRIPKKVTAGEDAHRGFGFVDFITKAD 840
Query: 76 AKRV 79
AKR
Sbjct: 841 AKRA 844
>gi|321476727|gb|EFX87687.1| hypothetical protein DAPPUDRAFT_306569 [Daphnia pulex]
Length = 845
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 4 EATTVKRKSSNVAKQT-GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
E RK+ + +K+ SK+LVRNIPF+A EV ELFK FGELK VRLPKKM G+ H
Sbjct: 710 ETIITARKTLSTSKEPISSKLLVRNIPFEATTKEVTELFKPFGELKAVRLPKKMAGNQSH 769
Query: 63 RGFGFVEFITKNEAKRV 79
RGF F++FITK +AKR
Sbjct: 770 RGFAFIDFITKQDAKRA 786
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+I +RN+ + A + ++E LF +G L LP + +GF FV ++ A R
Sbjct: 314 RIFIRNLAYTATEEDIEALFSRYGPLAETHLPIDKHSRKI-KGFAFVTYVIPEHAVRA 370
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+LV+N+ Q+ E+ +LF FGEL V LP + V + VEF+ EAK
Sbjct: 502 MLVKNLDAQSNVDELRDLFSPFGELGRVLLPPRGVTA-------IVEFLEPTEAK 549
>gi|189235137|ref|XP_001807432.1| PREDICTED: similar to RBD protein [Tribolium castaneum]
gi|270003801|gb|EFA00249.1| hypothetical protein TcasGA2_TC003078 [Tribolium castaneum]
Length = 840
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM-VGSGLHRGFG 66
V +KS+ KQTG+KILVRNIPFQA Q E+ ELF FGE+K +RLPKKM + G HRGF
Sbjct: 715 VVKKSTKATKQTGTKILVRNIPFQANQKEIRELFSVFGEIKALRLPKKMALDGGSHRGFA 774
Query: 67 FVEFITKNEAK 77
FV+F+ ++AK
Sbjct: 775 FVDFVAASDAK 785
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+TG KI VRN+ + + +VE LF FG L V LP + +GFG V F+ A
Sbjct: 327 ETG-KIFVRNLAYTTTEDDVENLFSKFGPLAEVNLPVDPTSKKI-KGFGTVTFVMPEHAA 384
Query: 78 RV 79
R
Sbjct: 385 RA 386
>gi|391335607|ref|XP_003742181.1| PREDICTED: probable RNA-binding protein 19-like [Metaseiulus
occidentalis]
Length = 836
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 3/77 (3%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG--SGLH 62
A V+RK+ + K + +KILVRN+PFQA + E+ ELF FGELK VRLPKKM G SG H
Sbjct: 700 AAGVERKTQKLGKAS-TKILVRNVPFQANRKEIFELFAVFGELKTVRLPKKMFGGDSGSH 758
Query: 63 RGFGFVEFITKNEAKRV 79
RGF FVEFITK++AKR
Sbjct: 759 RGFAFVEFITKSDAKRA 775
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
K + V TG ++ +RN+P+ ++E+E+LFK FG + + L + + +GF FV
Sbjct: 289 KEVAPEVVADTG-RLFIRNLPYTTTENELEDLFKPFGPIAELHLSIDSI-TKKPKGFAFV 346
Query: 69 EFI 71
++
Sbjct: 347 AYV 349
>gi|47226530|emb|CAG08546.1| unnamed protein product [Tetraodon nigroviridis]
Length = 944
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 78
TG+K+LVRNIPFQA E+ ELF FGELK VRLPKK G+G HRGFGF++F+TK +AK+
Sbjct: 845 TGTKLLVRNIPFQASVRELRELFCTFGELKTVRLPKKAAGTGNHRGFGFIDFVTKQDAKK 904
Query: 79 V 79
Sbjct: 905 A 905
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S A ++ S ILV+N+P SE+EELF A G L V LP SGL VEF+
Sbjct: 619 SQAAAPRSTSVILVKNLPAGVASSELEELFSAHGSLGRVLLPP----SGL---TAIVEFL 671
Query: 72 TKNEAKRV 79
EAKR
Sbjct: 672 EPTEAKRA 679
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P K+ + +F AFG + L K G R FGFV F ++ EA R
Sbjct: 2 SRLIVKNLPNGMKEERFKSMFAAFGTVTDCTL--KFTKDGKFRKFGFVGFRSEEEANRA 58
>gi|21064855|gb|AAM29657.1| SD14970p [Drosophila melanogaster]
Length = 918
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK-MVGSGLHRGFG 66
+R+ ++ KQTG+KILVRNIPFQA+ EV ++FKAFGEL+ +R+PKK G HRGFG
Sbjct: 772 AQRRLASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFG 831
Query: 67 FVEFITKNEAKRV 79
FV++++K EAKR
Sbjct: 832 FVDYMSKAEAKRA 844
>gi|24661759|ref|NP_648337.1| CG3335 [Drosophila melanogaster]
gi|7294907|gb|AAF50237.1| CG3335 [Drosophila melanogaster]
Length = 918
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK-MVGSGLHRGFG 66
+R+ ++ KQTG+KILVRNIPFQA+ EV ++FKAFGEL+ +R+PKK G HRGFG
Sbjct: 772 AQRRLASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFG 831
Query: 67 FVEFITKNEAKRV 79
FV++++K EAKR
Sbjct: 832 FVDYMSKAEAKRA 844
>gi|194868033|ref|XP_001972201.1| GG15393 [Drosophila erecta]
gi|190653984|gb|EDV51227.1| GG15393 [Drosophila erecta]
Length = 917
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK-MVGSGLHRGFGF 67
+R+ ++ KQTG+KILVRNIPFQA+ EV ++FKAFGEL+ +R+PKK G HRGFGF
Sbjct: 772 QRRLASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFGF 831
Query: 68 VEFITKNEAKRV 79
V++++K EAKR
Sbjct: 832 VDYMSKAEAKRA 843
>gi|195490760|ref|XP_002093276.1| GE20857 [Drosophila yakuba]
gi|194179377|gb|EDW92988.1| GE20857 [Drosophila yakuba]
Length = 919
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK-MVGSGLHRGFG 66
+R+ ++ KQTG+KILVRNIPFQA+ EV ++FKAFGEL+ +R+PKK G HRGFG
Sbjct: 773 AQRRLASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFG 832
Query: 67 FVEFITKNEAKRV 79
FV++++K EAKR
Sbjct: 833 FVDYMSKAEAKRA 845
>gi|195589101|ref|XP_002084294.1| GD14198 [Drosophila simulans]
gi|194196303|gb|EDX09879.1| GD14198 [Drosophila simulans]
Length = 778
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK-MVGSGLHRGFG 66
+R+ ++ KQTG+KILVRNIPFQA+ EV ++FKAFGEL+ +R+PKK G HRGFG
Sbjct: 632 AQRRLASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFG 691
Query: 67 FVEFITKNEAKRV 79
FV++++K EAKR
Sbjct: 692 FVDYMSKAEAKRA 704
>gi|170048416|ref|XP_001852664.1| multiple RNA-binding domain-containing protein 1 [Culex
quinquefasciatus]
gi|167870542|gb|EDS33925.1| multiple RNA-binding domain-containing protein 1 [Culex
quinquefasciatus]
Length = 302
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGF 67
RK++ V KQTG+KILVRN+PFQA E+ +LFK FGELK VRLPKKMV HRGF F
Sbjct: 180 RKATKVKKQTGTKILVRNVPFQANVKELRDLFKVFGELKSVRLPKKMVSGADESHRGFCF 239
Query: 68 VEFITKNEAKRV 79
V+F+ + +AKR
Sbjct: 240 VDFMAEPDAKRA 251
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS-GLHRGFGFVEF 70
G+ + ++N+ FQ ++ + + F+ G + V++ ++ G RG+GFV+F
Sbjct: 89 GTTLFIKNLSFQTREDAIRDTFRHVGPIHSVQVVRRKDGERNESRGYGFVQF 140
>gi|242013547|ref|XP_002427466.1| RNA binding motif protein, putative [Pediculus humanus corporis]
gi|212511852|gb|EEB14728.1| RNA binding motif protein, putative [Pediculus humanus corporis]
Length = 846
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
S A T R + ++ SKILVRN+PFQA + E+ +LFK FGE+K +RLPKK+VGSG H
Sbjct: 729 SVANTNSRNTYKKCEKPSSKILVRNVPFQATKREIGDLFKVFGEIKAIRLPKKLVGSGSH 788
Query: 63 RGFGFVEFITKNEAKRV 79
RGF FVE+ T +AKR
Sbjct: 789 RGFCFVEYNTVQDAKRA 805
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM----VGSGLHRGFGFVEFITK 73
+ G+ I V+N+ F +S + + F+A G + V + +K G L G+GFVEF K
Sbjct: 640 EEGTVIFVKNLNFATNESSLRKHFEACGTVLSVTIARKKDPKEPGKSLSMGYGFVEFSLK 699
Query: 74 NEAKRV 79
EA +
Sbjct: 700 EEADKA 705
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 15 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
V+ ++ + ILV+N+PF E+ E F+ FG L V +P V + VEF +
Sbjct: 511 VSPRSNTVILVKNLPFGTTSEEISEKFRKFGLLSRVVVPPSGVAA-------LVEFAEPS 563
Query: 75 EAK 77
EA+
Sbjct: 564 EAR 566
>gi|193624932|ref|XP_001949363.1| PREDICTED: probable RNA-binding protein 19-like [Acyrthosiphon
pisum]
Length = 831
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 54/74 (72%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
++ TV + + + +KILVRNIPFQA EV ELFK FGELK +R+PKKMVG+G HR
Sbjct: 694 QSATVAERKQGKSYEESTKILVRNIPFQASIQEVIELFKTFGELKGLRMPKKMVGTGTHR 753
Query: 64 GFGFVEFITKNEAK 77
GF FVE+ +K EAK
Sbjct: 754 GFAFVEYNSKTEAK 767
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 14/71 (19%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
TV +S NV ILV+N+P + E++++F +G + V LP V G
Sbjct: 495 TVINRSKNV-------ILVKNLPADTTELELKDIFSKYGLVNRVVLPPSGVT-------G 540
Query: 67 FVEFITKNEAK 77
+EF+ +EAK
Sbjct: 541 LIEFVQNSEAK 551
>gi|195133350|ref|XP_002011102.1| GI16192 [Drosophila mojavensis]
gi|193907077|gb|EDW05944.1| GI16192 [Drosophila mojavensis]
Length = 919
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GSGLHRGFG 66
+R+ KQTG+KILVRNIPFQA EV ++FKAFGEL +RLPKKM G HRGF
Sbjct: 774 ARRRQVAQKKQTGTKILVRNIPFQAHHHEVRDIFKAFGELTSLRLPKKMTPGEDSHRGFC 833
Query: 67 FVEFITKNEAKRV 79
FV++ TK +AKR
Sbjct: 834 FVDYTTKADAKRA 846
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 5 ATTVKRKSSNVAKQTGSK-----ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
+T K K+ AKQ + I + N+P++AK+S++ + FK VRLP K+
Sbjct: 231 STESKSKTKGKAKQDKADLQLFTIKIHNVPYKAKRSDIIKFFKPLKPYS-VRLPSKV--- 286
Query: 60 GLHRGFGFVEFITKNEAKR 78
GF +V F T+++ R
Sbjct: 287 ---HGFCYVGFKTEHDMAR 302
>gi|198415693|ref|XP_002128145.1| PREDICTED: similar to RNA binding motif protein 19 [Ciona
intestinalis]
Length = 766
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 6/79 (7%)
Query: 6 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS-----G 60
T+ KR+ KQ SKILVRN+PFQA E+E LFK+FGELK VR+PKK VGS G
Sbjct: 628 TSAKRRFQLDKKQASSKILVRNVPFQANSGEIESLFKSFGELKSVRMPKK-VGSITAQAG 686
Query: 61 LHRGFGFVEFITKNEAKRV 79
HRGF FV+F+TK EAK+
Sbjct: 687 SHRGFAFVDFLTKQEAKKA 705
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++ VRN+P+ A + ++E FK+FG L V +P + S GFGF+ ++ A
Sbjct: 254 RLYVRNLPYTATEEDLENHFKSFGPLSEVSIPVDDM-SKKSVGFGFITYMMPEHA 307
>gi|260834035|ref|XP_002612017.1| hypothetical protein BRAFLDRAFT_124790 [Branchiostoma floridae]
gi|229297390|gb|EEN68026.1| hypothetical protein BRAFLDRAFT_124790 [Branchiostoma floridae]
Length = 843
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
+ +RK + KQ SKILVRNIPFQA + EV+ LF FGE+KFVRLP+K G+ HRGFG
Sbjct: 710 SSQRKKVSRKKQRSSKILVRNIPFQANKREVQNLFSTFGEIKFVRLPQKFGGT-QHRGFG 768
Query: 67 FVEFITKNEAKRV 79
FVEF++K +AKR
Sbjct: 769 FVEFLSKQDAKRA 781
>gi|195326391|ref|XP_002029912.1| GM25167 [Drosophila sechellia]
gi|194118855|gb|EDW40898.1| GM25167 [Drosophila sechellia]
Length = 917
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK-MVGSGLHRGFG 66
+R+ ++ KQTG+KILVRNIPFQA+ EV ++ KAFGEL+ +R+PKK G HRGFG
Sbjct: 771 AQRRLASQKKQTGTKILVRNIPFQAQYREVRDILKAFGELRSLRIPKKATTGEDAHRGFG 830
Query: 67 FVEFITKNEAKRV 79
FV++++K EAKR
Sbjct: 831 FVDYMSKAEAKRA 843
>gi|291232095|ref|XP_002735981.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Saccoglossus kowalevskii]
Length = 861
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T RK KQ +KILVRN+PF+A + E++ELF FGE+K +R+PKK SG HRGFG
Sbjct: 725 TSTRKKQVTKKQKSTKILVRNLPFEATRREIQELFSTFGEIKSIRIPKK--ASGTHRGFG 782
Query: 67 FVEFITKNEAKRV 79
FV+F+TK +AKR
Sbjct: 783 FVDFLTKQDAKRA 795
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S A ++ + ILV+N+P E+ +F FGEL + LP V G VEF+
Sbjct: 494 SQAAAPRSSTVILVKNLPAATLPEELRHVFSKFGELGRILLPPAGVT-------GIVEFL 546
Query: 72 TKNEAK 77
NEAK
Sbjct: 547 ETNEAK 552
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+I+V+N+P K+ + + LF GE+ V+L K G+ R FGF+ + T +AK
Sbjct: 2 SRIIVKNLPKGMKEEKFKNLFSERGEITDVQL--KYTKDGIFRRFGFIGYKTATQAK 56
>gi|156402343|ref|XP_001639550.1| predicted protein [Nematostella vectensis]
gi|156226679|gb|EDO47487.1| predicted protein [Nematostella vectensis]
Length = 862
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
ILVRN+PF+A E+ ELF FGE+K +RLPKKM G+G HRGF FV+F+TK +AKR
Sbjct: 763 ILVRNVPFEATTKEIRELFSTFGEIKTLRLPKKMTGTGPHRGFAFVDFLTKQDAKRA 819
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM----VGSGLHRGFGFV 68
S+ G + V+N+ F++ + +++ F A G +K + KK GS L G+GFV
Sbjct: 650 SDEEDTEGVTLFVKNLSFESTEEALKQKFAAVGPVKSATIAKKKDPKKPGSLLSMGYGFV 709
Query: 69 EFITKNEAKRV 79
EF K A+
Sbjct: 710 EFCNKASAQEA 720
>gi|14488165|emb|CAC42098.1| RBD protein [Chironomus tentans]
Length = 849
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Query: 8 VKRKSSNVAKQTGS-KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
V RK ++ KQ GS KI+VRNIPFQA +E+ +LF+ FGELK VRLPKK G HRGFG
Sbjct: 707 VSRKKTDNKKQEGSTKIMVRNIPFQANANEIRQLFQVFGELKAVRLPKK-PGIDQHRGFG 765
Query: 67 FVEFITKNEAK 77
F++F+TK++AK
Sbjct: 766 FIDFVTKSDAK 776
>gi|194768695|ref|XP_001966447.1| GF22183 [Drosophila ananassae]
gi|190617211|gb|EDV32735.1| GF22183 [Drosophila ananassae]
Length = 939
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV---GSGLHRG 64
+R+ + KQTG+K LVRNIPFQA EV ++FKAFGELK +R+PKK G HRG
Sbjct: 790 AQRRLTAQKKQTGTKFLVRNIPFQATYHEVRDIFKAFGELKSLRIPKKATSGAGGESHRG 849
Query: 65 FGFVEFITKNEAKRV 79
FGFV+++ K EAKR
Sbjct: 850 FGFVDYMNKAEAKRA 864
>gi|158292878|ref|XP_314164.4| AGAP005249-PA [Anopheles gambiae str. PEST]
gi|157017199|gb|EAA09490.4| AGAP005249-PA [Anopheles gambiae str. PEST]
Length = 862
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKN 74
KQTG KILVRNIPFQA EV +LFK FG++K +RLPKKM S HRGF FVE+ ++
Sbjct: 708 KQTGCKILVRNIPFQASAKEVRDLFKPFGDIKSLRLPKKMAASADDTHRGFCFVEYDEES 767
Query: 75 EAKRV 79
+AKR
Sbjct: 768 DAKRA 772
>gi|357616005|gb|EHJ69949.1| hypothetical protein KGM_10362 [Danaus plexippus]
Length = 888
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM-VGSGLHRGFGFV 68
+K+S Q G+KIL+RN+PFQA + E+ E+F+AFGE+K +RLP+K+ VGS HRGF FV
Sbjct: 753 KKTSKDTIQNGTKILIRNVPFQANRKELHEIFRAFGEIKTLRLPQKLTVGSEQHRGFAFV 812
Query: 69 EFITKNEAK 77
++ +K +AK
Sbjct: 813 DYYSKADAK 821
>gi|449666027|ref|XP_002162990.2| PREDICTED: probable RNA-binding protein 19-like [Hydra
magnipapillata]
Length = 914
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
V RK +N Q SK++VRNIPF+A E++ELF FG +K +RLPKK+ G+ HRGF F
Sbjct: 779 VSRKRANEKNQVSSKMVVRNIPFEATVKELQELFSTFGHIKSLRLPKKITGT--HRGFAF 836
Query: 68 VEFITKNEAKRV 79
++F TK +AKR
Sbjct: 837 IDFTTKQDAKRA 848
>gi|196011704|ref|XP_002115715.1| hypothetical protein TRIADDRAFT_59687 [Trichoplax adhaerens]
gi|190581491|gb|EDV21567.1| hypothetical protein TRIADDRAFT_59687 [Trichoplax adhaerens]
Length = 319
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 55/76 (72%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
S+ +T+K+ S K +KILV+N+PF+A +SEV+++F FGE+K +R+P+K H
Sbjct: 191 SQTSTIKKNMSVSNKPNTTKILVKNLPFEATKSEVKQIFSVFGEIKCIRIPRKYGQRKQH 250
Query: 63 RGFGFVEFITKNEAKR 78
RGF F+EFITK +AKR
Sbjct: 251 RGFTFIEFITKADAKR 266
>gi|312374833|gb|EFR22311.1| hypothetical protein AND_15450 [Anopheles darlingi]
Length = 867
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 5/77 (6%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LH 62
A RKS KQTGSKILVRNIPFQA SE+ +LFK +G + +RLP+KMV + H
Sbjct: 706 AADEARKSKAGPKQTGSKILVRNIPFQANASEIRDLFK-YGTV--LRLPRKMVANADESH 762
Query: 63 RGFGFVEFITKNEAKRV 79
RGFGFVEF+ + +AKR
Sbjct: 763 RGFGFVEFVREPDAKRA 779
>gi|324509584|gb|ADY44027.1| RNA-binding protein 19 [Ascaris suum]
Length = 567
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 9 KRKS-SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL-HRGFG 66
KRKS S + + +KI+VRNIPFQA + E+++LF FGEL+ R+PKKM S HRGFG
Sbjct: 431 KRKSVSRLQQGDCTKIMVRNIPFQATRKELKQLFATFGELRAFRMPKKMGSSAEGHRGFG 490
Query: 67 FVEFITKNEAKRV 79
FV+F+T+ +A+R
Sbjct: 491 FVDFLTRADARRA 503
>gi|224000233|ref|XP_002289789.1| potential RNA bindin g protein [Thalassiosira pseudonana CCMP1335]
gi|220974997|gb|EED93326.1| potential RNA bindin g protein [Thalassiosira pseudonana CCMP1335]
Length = 886
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 8/73 (10%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T+ + S N +KI++RNIPF+A +SE+ +LF FG+LK VRLPKK G HRG
Sbjct: 754 APTIDKASKN------TKIMIRNIPFEATRSEILQLFGTFGQLKKVRLPKKF--DGTHRG 805
Query: 65 FGFVEFITKNEAK 77
FGF EF+T+ EA+
Sbjct: 806 FGFCEFLTRKEAQ 818
>gi|393912130|gb|EJD76605.1| RNA recognition domain-containing protein [Loa loa]
Length = 874
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL-HRGFGFVEFITKNEAKR 78
+KIL+RNIPFQA + EV++LF FGE++ R+PKK+ S HRGFGFV+F+T+++A+R
Sbjct: 750 ATKILIRNIPFQATRKEVKQLFATFGEIRSFRMPKKVGASAEGHRGFGFVDFLTRSDARR 809
Query: 79 V 79
Sbjct: 810 A 810
>gi|168015560|ref|XP_001760318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688332|gb|EDQ74709.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 878
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
GS++ T K +K++ +KI+VRN+ F+A + +++++F FG++K +RLPKK G+
Sbjct: 737 GSDSKTSATKGKAESKESSTKIIVRNVAFEATRKDLQQIFNPFGQIKSIRLPKKFDGN-- 794
Query: 62 HRGFGFVEFITKNEAK 77
HRGF FVEF+TK EA+
Sbjct: 795 HRGFAFVEFLTKKEAQ 810
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 52
+TG ++ VRN+P+ A + E+ ELF FGEL V L
Sbjct: 328 ETG-RLFVRNLPYTATEEELAELFGKFGELSEVHL 361
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 15 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
+A S+I V+N+P + + E F A GE+ ++ + G R FGFV + T+
Sbjct: 1 MASTGSSRICVKNLPRHVTEERLREHFAAKGEVTDAKIIR--TRDGRTRQFGFVGYRTEE 58
Query: 75 EAK 77
EAK
Sbjct: 59 EAK 61
>gi|300120416|emb|CBK19970.2| unnamed protein product [Blastocystis hominis]
Length = 639
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 55/75 (73%), Gaps = 5/75 (6%)
Query: 6 TTVKRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
TT KRK + A++ G +K+LVRN+PF+A +SE+ ELF +FG+LK +R PKK G+
Sbjct: 532 TTKKRKLTARAEEDGEKRTKLLVRNVPFEASRSELRELFGSFGQLKSLRQPKKFDGTS-- 589
Query: 63 RGFGFVEFITKNEAK 77
RGF FVE+++ ++AK
Sbjct: 590 RGFAFVEYVSSDDAK 604
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKNEA 76
+ + I ++N+ ++ ++ V +LF + LK + LPKK SG L GFGF + T+ +A
Sbjct: 444 SNTTIYIKNLNWKTTEAAVRKLFNSVPGLKSITLPKKKTPSGESLPMGFGFAVYETRAQA 503
Query: 77 KRV 79
R
Sbjct: 504 LRA 506
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
ILV+N+P+ A + E+ LF +GE++ + LP+ V V F +EAKR
Sbjct: 294 ILVKNLPYTADRDELLSLFSQYGEVQQLVLPESHV-------MALVTFSVPSEAKRA 343
>gi|301103392|ref|XP_002900782.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
gi|262101537|gb|EEY59589.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
Length = 758
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
SKI+VRN+ F+A +E+ ELF AFG+LK VR+PKK G HRGF FVEF+T+ EA+
Sbjct: 641 SKIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKF--DGRHRGFAFVEFLTEQEAR 695
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+++ VRN+PF A + ++E L +G ++ V +P + + +G+GFV F T +A+
Sbjct: 229 ARLFVRNLPFTAVEEDLEALCSTYGPVEEVHMP--LDDTRRRKGYGFVLFRTTVDAQ 283
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRL-----PKKMVGSGLHRGFGFVEFITKNEAK 77
I V+N+ F K+ +E++F G+L+ V + PK+ + L GFGFVE++ + +
Sbjct: 542 ICVKNLNFSTKEPALEKIFARCGKLRKVTVARRKDPKRGM---LSMGFGFVEYVDAKDTE 598
Query: 78 RV 79
R
Sbjct: 599 RA 600
>gi|348686579|gb|EGZ26394.1| hypothetical protein PHYSODRAFT_484800 [Phytophthora sojae]
Length = 768
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
SKI+VRN+ F+A +E+ ELF AFG+LK VR+PKK G HRGF FVEF+T+ EA+
Sbjct: 651 SKIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKF--DGRHRGFAFVEFLTEQEAR 705
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+++ +RN+PF A + ++E L +G ++ V +P + + +G+GFV F T +A+
Sbjct: 235 ARLFLRNLPFTAVEEDLEALCSTYGPVEEVHMP--LDETRRRKGYGFVLFRTTVDAQ 289
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
M + ATT K + A+ TG+++ V+N+P + + E F A GE+ + + GS
Sbjct: 1 MAAAATTSAPK--DAAQDTGTRLYVQNLPAYVDSARLREHFAAQGEVTDACVIRTKDGSK 58
Query: 61 LHRGFGFVEFITKNEAKRV 79
R FGFV F + +A++
Sbjct: 59 SRR-FGFVGFKSAKQAEQA 76
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRL-----PKKMVGSGLHRGFGFVEFITKNEAK 77
I V+N+ F K++ +E++F+ G+L+ V + PK+ + L GFGFVE++ +
Sbjct: 552 ICVKNLNFTTKEAALEKIFERCGKLRKVTVARRKDPKRGM---LSMGFGFVEYVDAKHTE 608
Query: 78 RV 79
R
Sbjct: 609 RA 610
>gi|302676924|ref|XP_003028145.1| hypothetical protein SCHCODRAFT_60180 [Schizophyllum commune H4-8]
gi|300101833|gb|EFI93242.1| hypothetical protein SCHCODRAFT_60180 [Schizophyllum commune H4-8]
Length = 743
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
G+E V RK + AK T +K++V+N+PF+A + ++ ELF A G+LK VRLP+K
Sbjct: 604 GAEEDDVTRKGAKSAKSTTTKMIVKNVPFEATKKDIRELFGAHGQLKSVRLPRKFDARA- 662
Query: 62 HRGFGFVEFITKNEAK 77
RGF F++F+T+ EA+
Sbjct: 663 -RGFAFLDFVTRQEAE 677
>gi|397643662|gb|EJK76002.1| hypothetical protein THAOC_02254 [Thalassiosira oceanica]
Length = 869
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+KI+VRN+PF+A +SE+ +LF +FG+LK VRLPKK G HRGF F EF+T EA+
Sbjct: 754 TKIMVRNVPFEATRSELLQLFGSFGQLKKVRLPKKF--DGTHRGFAFCEFVTSKEAR 808
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
Q ++ VRN+PF + E+ E F FG++ V +P + + ++G+ FVEF +K +AK
Sbjct: 320 QLADRLFVRNLPFTTTEEELHETFSHFGQINSVHIP--VDDAKRNKGYAFVEFESKKDAK 377
>gi|402592999|gb|EJW86926.1| RNA recognition domain-containing protein [Wuchereria bancrofti]
Length = 890
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 78
+KIL+RNIPFQA + EV++LF FGE++ R+PKK HRGFGFV+F+T+ +A+R
Sbjct: 769 ATKILIRNIPFQATRKEVKQLFATFGEIRAFRMPKKAAEG--HRGFGFVDFLTRADARR 825
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 8/63 (12%)
Query: 13 SNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL--PKKMVGSGLHRGFGFV 68
++VAK +TG ++ VRN+P+ ++ LFK +GE+ +++ KK +GL +GF V
Sbjct: 268 ASVAKILETG-RLFVRNLPYVCSDEDLRYLFKKYGEISDLQMIVSKK---TGLCKGFAIV 323
Query: 69 EFI 71
++
Sbjct: 324 TYV 326
>gi|328773827|gb|EGF83864.1| hypothetical protein BATDEDRAFT_8977, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 873
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 12/77 (15%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
M E T+K G+K++VRN+PF+A + +++ELF +F ++K VR+P K G
Sbjct: 751 MDDEDDTIK----------GTKLVVRNVPFEASKKDIKELFSSFAQVKSVRIPTKY--DG 798
Query: 61 LHRGFGFVEFITKNEAK 77
HRGF FV+F+TK EAK
Sbjct: 799 QHRGFAFVDFLTKQEAK 815
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
ILV+NIP+ ++ ++ E F FG L + LP + VEF +NEAK
Sbjct: 523 ILVKNIPYTTEEEDLIETFGKFGTLGRIILPPA-------KTIALVEFTERNEAK 570
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+I+VRN+ + ++EELFK FG + V +P + +G+ F+ ++ A
Sbjct: 340 RIMVRNLTYLCSPEDIEELFKPFGPISEVHIPIDR-ETKKSKGYAFIMYLMPENA 393
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
N + SKI+++N+PF++ E+ +LF A+GE++ VR+PKK +G HRGFGFVEF+T+
Sbjct: 773 NAKSKPSSKIIIKNLPFESTTKEIRKLFAAYGEIQSVRIPKK--PNGGHRGFGFVEFLTE 830
Query: 74 NEAKRV 79
EAK
Sbjct: 831 EEAKNA 836
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
+K++ + +LV+NIPF+ + E+E LF FGEL V L R +E++ NE
Sbjct: 523 SKRSNTTLLVKNIPFKTDEEELELLFSKFGELARVVL-------APARTIALIEYLHPNE 575
Query: 76 AK 77
AK
Sbjct: 576 AK 577
>gi|325185984|emb|CCA20488.1| RNAbinding protein putative [Albugo laibachii Nc14]
Length = 754
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
V+RK+S+ ++ SKI++RN+ F+A ++ L AFG+LK VR+PKK G HRGF F
Sbjct: 630 VERKTSDKDGKSTSKIIIRNVAFEATVHDIRSLCGAFGQLKRVRMPKKF--DGRHRGFAF 687
Query: 68 VEFITKNEAK 77
VEF+T+ EAK
Sbjct: 688 VEFMTEQEAK 697
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 4 EATTVKR-KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
EAT V + N A +++ VRN+PF A + ++ +F+AFG++ V +P + +
Sbjct: 225 EATQVDGITAQNKADYACNRLFVRNLPFSAVEEDLRTIFEAFGKVAEVHIP--LDETKRR 282
Query: 63 RGFGFVEFITKNEAKRV 79
+GFGFV F T ++A++
Sbjct: 283 KGFGFVSFDTVSDAQKA 299
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG--LHRGFGFVEFITKNEAKRV 79
+ ++N+ F ++S +E F FG+L+ V + K G L GFGFVEF +N+A+R
Sbjct: 547 LCLKNLSFTTRESTLETYFSKFGKLRKVTIAKSRDKRGGILSMGFGFVEFADENDAQRA 605
>gi|299115735|emb|CBN74300.1| RNA binding protein [Ectocarpus siliculosus]
Length = 875
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+KI++RNIPFQA E+ EL +FG+LK VRLPKK G HRGF FV+F+T EA
Sbjct: 756 TKIIIRNIPFQATAKEIRELCSSFGQLKRVRLPKKFDGG--HRGFAFVDFLTAQEA 809
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++ VRN+P+ + ++ +LF +FG L V LP V G +GF FV+F+ +A
Sbjct: 334 RLFVRNLPYTCTEDDLRDLFGSFGMLSEVHLPVDDVKKG--KGFAFVQFVIPEDA 386
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
E+T K +++ + ILV+N+P+ A+ +E+ + F AFG++ V LP
Sbjct: 514 ESTKGKGSGKGAEERSSTVILVKNLPYSAEAAELAKRFGAFGDVGRVLLPPSKT------ 567
Query: 64 GFGFVEFITKNEAKRV 79
VEF+ ++AK+
Sbjct: 568 -VALVEFLAASDAKKA 582
>gi|384483751|gb|EIE75931.1| hypothetical protein RO3G_00635 [Rhizopus delemar RA 99-880]
Length = 831
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K++VRN+PF+A ++ ELF ++G+LK +R+PKK G HRGF F++F+TK EAK V
Sbjct: 733 TKLVVRNVPFEATDKDLRELFGSYGQLKSLRMPKKFTGG--HRGFAFLDFLTKQEAKNV 789
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
ILV+NIP+ + ++ ELF +GEL V +P + VEF+ +EA+
Sbjct: 521 ILVKNIPYGTTEEDMRELFGKYGELGRVLMPPA-------KTIAVVEFLEPSEARNA 570
>gi|341898155|gb|EGT54090.1| hypothetical protein CAEBREN_29703, partial [Caenorhabditis
brenneri]
Length = 466
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K+LVRN+PF+A EVE LF+ FG +K +R+P+K HRGFGFV+FI+ +EA+R
Sbjct: 404 TKLLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISADEARRA 462
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELF-KAFGEL-KFVRLPKKMVGS----GLHR 63
+K S ++GS I V+N+ F ++ LF K +G+L K ++ KK+ + L
Sbjct: 286 KKQSEKEIESGSAIFVKNLAFDTTDDGLDSLFRKRYGDLVKSAQISKKLNPAEPTKPLSM 345
Query: 64 GFGFVEFITKNEAKRV 79
GFGFV+F T +AK+
Sbjct: 346 GFGFVQFYTSLDAKQA 361
>gi|341892788|gb|EGT48723.1| CBN-RBD-1 protein [Caenorhabditis brenneri]
Length = 876
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K+LVRN+PF+A EVE LF+ FG +K +R+P+K HRGFGFV+FI+ +EA+R
Sbjct: 752 TKLLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISADEARRA 810
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVR--LPKKMVGSGLHRGFGFVEFI 71
+TG ++ +RN+P+ K+ +++ LFK +GE+ V+ + KK +G +GF VEF+
Sbjct: 277 ETG-RLFIRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKK---TGNCKGFAIVEFV 328
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELF-KAFGEL-KFVRLPKKMVGS----GLHRGFGFVEFI 71
++GS I V+N+ F ++ LF K +G+L K ++ KK+ + L GFGFV+F
Sbjct: 642 ESGSAIFVKNLAFDTTDDGLDSLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFY 701
Query: 72 TKNEAKRV 79
T +AK+
Sbjct: 702 TSLDAKQA 709
>gi|17542530|ref|NP_502432.1| Protein RBD-1 [Caenorhabditis elegans]
gi|3880097|emb|CAB05631.1| Protein RBD-1 [Caenorhabditis elegans]
Length = 872
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K+LVRN+PF+A EVE LF+ FG +K +R+PKK HRGFGFV+FI+ +EA R
Sbjct: 748 TKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRA 806
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVR--LPKKMVGSGLHRGFGFVEFI 71
+TG ++ +RN+P+ K+ +++ LFK +GE+ V+ + KK +G +GF VEF+
Sbjct: 277 ETG-RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKK---TGACKGFAIVEFV 328
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELF-KAFGEL-KFVRLPKKMVGS----GLHRGFGFVEFI 71
++GS + V+N+ F +E LF K +G+L K ++ KK+ + L GFGFV+F
Sbjct: 638 ESGSTLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFY 697
Query: 72 TKNEAK 77
T +AK
Sbjct: 698 TAFDAK 703
>gi|312086145|ref|XP_003144962.1| RNA recognition domain-containing protein [Loa loa]
Length = 190
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 8/83 (9%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK------MV 57
+ T ++ + + +KIL+RNIPFQA + EV++LF FGE++ R+PKK V
Sbjct: 43 DKITARKGVVELEQGEATKILIRNIPFQATRKEVKQLFATFGEIRSFRMPKKAGLFDSFV 102
Query: 58 GSGL--HRGFGFVEFITKNEAKR 78
G+ HRGFGFV+F+T+++A+R
Sbjct: 103 GASAEGHRGFGFVDFLTRSDARR 125
>gi|308491929|ref|XP_003108155.1| CRE-RBD-1 protein [Caenorhabditis remanei]
gi|308249003|gb|EFO92955.1| CRE-RBD-1 protein [Caenorhabditis remanei]
Length = 888
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K+LVRN+PF+A EVE LF+ FG +K +R+P+K HRGFGFV+FI+ +EA+R
Sbjct: 764 TKLLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISADEARRA 822
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVR--LPKKMVGSGLHRGFGFVEFI 71
+TG ++ +RN+P+ K+ +++ LFK +GE+ V+ + KK +G +GF VEF+
Sbjct: 287 ETG-RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKK---TGSCKGFAIVEFV 338
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELF-KAFGE-LKFVRLPKKMVGS- 59
SE K K ++GS I V+N+ F +E LF K +G+ LK ++ KK+ +
Sbjct: 639 SETKPKKSKQPEKEIESGSTIFVKNLAFDTTDYGLETLFRKRYGDLLKSAQISKKLNPAE 698
Query: 60 ---GLHRGFGFVEFITKNEAK 77
L GFGFV+F T +AK
Sbjct: 699 PTKPLSMGFGFVQFYTAFDAK 719
>gi|308450796|ref|XP_003088431.1| hypothetical protein CRE_22247 [Caenorhabditis remanei]
gi|308247287|gb|EFO91239.1| hypothetical protein CRE_22247 [Caenorhabditis remanei]
Length = 901
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K+LVRN+PF+A EVE LF+ FG +K +R+P+K HRGFGFV+FI+ +EA+R
Sbjct: 777 TKLLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISADEARRA 835
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVR--LPKKMVGSGLHRGFGFVEFI 71
+TG ++ +RN+P+ K+ +++ LFK +GE+ V+ + KK +G +GF VEF+
Sbjct: 301 ETG-RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKK---TGSCKGFAIVEFV 352
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELF-KAFGE-LKFVRLPKKMVGS- 59
SE K K ++GS I V+N+ F +E LF K +G+ LK ++ KK+ +
Sbjct: 652 SETKPKKAKQPEKEIESGSTIFVKNLAFDTTDYGLETLFRKRYGDLLKSAQISKKLNPAE 711
Query: 60 ---GLHRGFGFVEFITKNEAK 77
L GFGFV+F T +AK
Sbjct: 712 PTKPLSMGFGFVQFYTAFDAK 732
>gi|396480635|ref|XP_003841040.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
gi|312217614|emb|CBX97561.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
Length = 831
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
G++A +R+ + K +KIL++N+PF+A + EV LF +G+L+ VR+PKK S
Sbjct: 688 GADAAEERRREDALKKAASTKILIKNLPFEASKKEVRALFTPYGQLRSVRVPKKFDSSS- 746
Query: 62 HRGFGFVEFITKNEA 76
RGFGF EF TK +A
Sbjct: 747 -RGFGFAEFTTKRDA 760
>gi|403368470|gb|EJY84070.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 804
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+K+LV+N+ F+A S+++ELFK +G LK RLPKK + S HRGFGFVEF++ EAK
Sbjct: 701 SNKLLVKNLAFEATDSDIKELFKTYGALKKCRLPKK-INSKSHRGFGFVEFVSSEEAK 757
>gi|281201992|gb|EFA76199.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 874
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
A +KI V+NIPF+A +EV +LF +GEL+ VR+PKK G HRGFGFV+++T+ E
Sbjct: 772 ANVVSTKISVKNIPFEASPAEVRKLFATYGELQSVRIPKKPTGG--HRGFGFVQYLTEQE 829
Query: 76 AK 77
AK
Sbjct: 830 AK 831
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
ILV+NIP + Q+E+E +F FGEL V L R +EF +EAK
Sbjct: 517 ILVKNIPHKTTQTELETMFSRFGELARVLLTPA-------RTLALLEFYHVSEAK 564
>gi|320168309|gb|EFW45208.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 1179
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K++VRN+PF+A + E+ ++F FG+LK VRLP+K G HRGF F+EF+TK EAK+
Sbjct: 1063 TKLIVRNVPFEATRKELFDVFSPFGQLKSVRLPQK--PGGQHRGFAFIEFLTKEEAKKA 1119
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
ILV+NIPF A + E+ LF GELK LP R VEF +EA+
Sbjct: 820 ILVKNIPFSATEDELRPLFAKHGELKRFALPST-------RALAVVEFAQPSEAR 867
>gi|313234383|emb|CBY24582.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 9 KRKSSNVAKQTGS-KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
++++ N + GS KI+VRN+PFQ + E+E+LF FGELKFVR+PK G HRGF F
Sbjct: 95 RQEAKNQDQPEGSCKIMVRNVPFQCQVPELEQLFSTFGELKFVRMPKNPTGK--HRGFAF 152
Query: 68 VEF 70
VEF
Sbjct: 153 VEF 155
>gi|387196381|gb|AFJ68758.1| rna binding motif protein 19 [Nannochloropsis gaditana CCMP526]
Length = 291
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+K++VRN+ FQA EV+ELF FG++K VRLPKK GS HRGF FVEF+T EA
Sbjct: 166 TKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGS--HRGFAFVEFLTAQEA 219
>gi|339237553|ref|XP_003380331.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316976854|gb|EFV60053.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 645
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
Query: 8 VKRKSSNVA------KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
V R+SS V ++ +KI+VRNIPFQA E+ +LFK FG ++ VRLPKK +G
Sbjct: 518 VDRQSSIVPYSEKTKPKSQTKIIVRNIPFQASVKEITKLFKVFGNVQSVRLPKKS-PNGQ 576
Query: 62 HRGFGFVEFITKNEAKR 78
HRGFGFVEF K +A++
Sbjct: 577 HRGFGFVEFNCKADAEK 593
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
N +++T S+++V+N+P K++ LF+ +G L +L + RGFGFV F
Sbjct: 10 NHSEETTSRLIVKNLPKNFKEAHFRALFEEYGTLTDCQLRFNEQNNNF-RGFGFVGF 65
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 15 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
V K++ + +LV+N+P + + +++ LF FG L V LP SGL VEF+ +
Sbjct: 408 VTKRSTNVMLVKNLPAKTETAQIRRLFGKFGRLGRVVLPP----SGLT---AIVEFLLDS 460
Query: 75 EAK 77
+AK
Sbjct: 461 DAK 463
>gi|340503643|gb|EGR30188.1| rbd protein, putative [Ichthyophthirius multifiliis]
Length = 379
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+KI++RN+ F+ + EV EL K FGE+K VRLPKKM +G HRGF FVEF T EAK
Sbjct: 300 SNKIVIRNLAFETDKKEVRELIKGFGEVKSVRLPKKM--NGQHRGFAFVEFTTTQEAK 355
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
Query: 23 ILVRNIPFQAKQSEVEELF--KAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ ++N+ F +++E++E F + GE+K V++ KK S +G+GFVE+
Sbjct: 202 VYIKNLDFSVQETELKEFFEKQNLGEIKAVKIIKKNNNS---QGYGFVEY 248
>gi|302810024|ref|XP_002986704.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
gi|300145592|gb|EFJ12267.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
Length = 730
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
AK + SK++VRN+ F+A + ++++LF FG++K V+LPKK G+ HRGF FVEF+TK E
Sbjct: 621 AKGSSSKLIVRNVAFEATRKDLKQLFSPFGQVKKVKLPKKFDGN--HRGFAFVEFVTKQE 678
Query: 76 AK 77
A+
Sbjct: 679 AQ 680
>gi|66809481|ref|XP_638463.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996868|sp|Q54PB2.1|MRD1_DICDI RecName: Full=Multiple RNA-binding domain-containing protein 1;
AltName: Full=RNA-binding motif protein 19 homolog;
AltName: Full=RNA-binding protein 19 homolog
gi|60467060|gb|EAL65101.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 895
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
SKI+++N+PF++ E+ +LF A+GE++ VR+PKK +G HRGFGFVEF+T+ EAK
Sbjct: 794 SSKIIIKNLPFESTIKEIRKLFTAYGEIQSVRIPKK--PNGGHRGFGFVEFLTEEEAKNA 851
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
+K++ + +LV+NIPF+ ++ E+ ELF FGEL V L R +E+I NE
Sbjct: 548 SKRSNTVLLVKNIPFKTQEHELHELFSKFGELSRVVLSPA-------RTIALIEYIHPNE 600
Query: 76 AK 77
AK
Sbjct: 601 AK 602
>gi|428175786|gb|EKX44674.1| hypothetical protein GUITHDRAFT_109452 [Guillardia theta CCMP2712]
Length = 895
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+ S + A Q SK+++RN+PF+A + E+ +L +FGEL +RLP K GS HRGF F E
Sbjct: 739 KPSDSQAPQDCSKLVIRNVPFEANKKELRDLLSSFGELTSLRLPSKFDGS--HRGFAFAE 796
Query: 70 FITKNE 75
F+T E
Sbjct: 797 FVTHQE 802
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
R SN A +LV+NIPF E+ ELF+ FG++ LPK + V+
Sbjct: 501 RDRSNTA------MLVKNIPFSTTLQELRELFERFGDVSHAVLPKT-------KTMAIVD 547
Query: 70 FITKNEAKRV 79
F +EA++
Sbjct: 548 FTHPSEARKA 557
>gi|219120004|ref|XP_002180750.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407466|gb|EEC47402.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 837
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 12 SSNVAKQTGSK---ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
SS AK T SK ++VRN+PFQA + E+ +LF +FG LK VRLPKK GS HRGF FV
Sbjct: 713 SSTAAKNTTSKSTKVMVRNVPFQATRKELLQLFGSFGPLKKVRLPKKFDGS--HRGFAFV 770
Query: 69 EFI 71
E++
Sbjct: 771 EYM 773
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+++ +RN+PF A + +++ F+AFG + +P +GF FV F+ N+A
Sbjct: 320 ANRLFLRNLPFTATEDDLKTHFEAFGSIVECHVPAD--DQKRSKGFAFVTFVKANDA 374
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELF-KAFGELKFVRLPKKMVG-SGLHRGFGF 67
R++ ++ + I V+N+ F + ++ ++F K +++ VR+PKK+ + GFGF
Sbjct: 614 RETDDLVEGPTPTIYVKNLNFHTTEDQLRQVFSKHVKDVRTVRIPKKIAPVKQMSMGFGF 673
Query: 68 VEFITKNEAKRV 79
VEF + A+ V
Sbjct: 674 VEFGSNESARTV 685
>gi|392579716|gb|EIW72843.1| hypothetical protein TREMEDRAFT_25743, partial [Tremella
mesenterica DSM 1558]
Length = 749
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%), Gaps = 4/67 (5%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK--MVGSGLH--RGFGFVEFIT 72
K G+K+LV+N+PF+A + EV+ELF A+G++K +R+PKK + SG H RGF F+EF T
Sbjct: 614 KSKGTKLLVKNLPFEATKKEVKELFSAYGQVKSLRVPKKPTLSASGAHSSRGFAFLEFTT 673
Query: 73 KNEAKRV 79
EA+R
Sbjct: 674 HVEAQRA 680
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S++ VRN+PF S++E F FG++ V LP G L G FV F +A
Sbjct: 218 SRLFVRNLPFVTTTSDLETHFSRFGQVDQVHLPLSPAGQPL--GTAFVLFRRPEDA 271
>gi|440789720|gb|ELR11019.1| RNA binding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 838
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
ILV+N+ F+A ++E+ ELF FG+LK VR+PKKM G RGF FV+FITK EAK
Sbjct: 747 ILVKNVAFEATKAEIRELFATFGQLKSVRVPKKMDGRA--RGFAFVDFITKQEAK 799
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 78
ILV+NIP Q K E+ ++F FG + V LP R +E++ +EA+R
Sbjct: 519 ILVKNIPHQTKLEELRDMFSKFGSVSRVILPPA-------RTLALIEYLEPSEARR 567
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
++ VRN+PF A + ++ +LFK G++ V +P + RG +V F+
Sbjct: 328 RLFVRNLPFSASEDDLYKLFKKHGDISEVHIPIDR-ETKKPRGMAYVTFM 376
>gi|406865361|gb|EKD18403.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 820
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +RK N K G +KI+++N+PFQA + +V LF AFGEL+ VR+PKK S
Sbjct: 675 GVDAAEERRKEDNAKKHAGKRTKIIIKNLPFQATKQDVRGLFGAFGELRSVRVPKKFDHS 734
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F FIT EA+
Sbjct: 735 T--RGFAFANFITAREAE 750
>gi|451846216|gb|EMD59526.1| hypothetical protein COCSADRAFT_100727 [Cochliobolus sativus
ND90Pr]
Length = 828
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
G++A +R K +KI+++N+PF+A + EV LF +G+L+ VR+PKK S
Sbjct: 686 GADAAEERRNEDAANKAASTKIIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDASS- 744
Query: 62 HRGFGFVEFITKNEA 76
RGFGF EF TK +A
Sbjct: 745 -RGFGFAEFTTKRDA 758
>gi|451993063|gb|EMD85538.1| hypothetical protein COCHEDRAFT_1187995 [Cochliobolus
heterostrophus C5]
Length = 828
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
G++A +R K +KI+++N+PF+A + EV LF +G+L+ VR+PKK S
Sbjct: 686 GADAAEERRNEDAAKKAASTKIIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDASS- 744
Query: 62 HRGFGFVEFITKNEA 76
RGFGF EF TK +A
Sbjct: 745 -RGFGFAEFTTKRDA 758
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP-KKMVGSGLHRGFGFVEFITKNE 75
++TG ++ +RN+ ++ + E+ E F G L+ V +P KK G G +GF FV+F N+
Sbjct: 298 RETG-RLYLRNLHYEVTEDEIREQFSKHGALEEVHVPLKKADGKG--KGFAFVQFQNPND 354
Query: 76 A 76
A
Sbjct: 355 A 355
>gi|169616726|ref|XP_001801778.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
gi|111060126|gb|EAT81246.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
Length = 830
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
G++A +RK K +KI+++N+PF+A + +V LF +G+L+ VR+PKK S
Sbjct: 688 GADAAEERRKEDAAKKAASTKIIIKNLPFEAGKKDVRALFTPYGQLRSVRVPKKFDASS- 746
Query: 62 HRGFGFVEFITKNEA 76
RGFGF EF TK +A
Sbjct: 747 -RGFGFAEFTTKRDA 760
>gi|428175787|gb|EKX44675.1| hypothetical protein GUITHDRAFT_109453 [Guillardia theta
CCMP2712]
Length = 163
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+ S + A Q SK+++RN+PF+A + E+ +L +FGEL +RLP K GS HRGF F E
Sbjct: 16 KPSDSQAPQDCSKLVIRNVPFEANKKELRDLLSSFGELTSLRLPSKFDGS--HRGFAFAE 73
Query: 70 FIT 72
F+T
Sbjct: 74 FVT 76
>gi|357168436|ref|XP_003581646.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 894
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
N ++ +K+LVRN+ F+A + ++ +LF FG+LK +RLP K G HRGF FVEF+TK
Sbjct: 764 NEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQLKSLRLPMKF---GSHRGFAFVEFVTK 820
Query: 74 NEAK 77
EA+
Sbjct: 821 QEAQ 824
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K++ ILV+N+PF + + ++ +F+ G L + LP V F V F+ EA
Sbjct: 547 KRSNHVILVKNLPFNSSEEDLAAMFQKHGSLDKIILPPTRV-------FALVVFVEATEA 599
Query: 77 KRV 79
+
Sbjct: 600 RHA 602
>gi|384245230|gb|EIE18725.1| hypothetical protein COCSUDRAFT_20380 [Coccomyxa subellipsoidea
C-169]
Length = 876
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
+++ K G+K++VRN+ F+A + +V LF FG++K RLPKK GS HRGF FV+F+
Sbjct: 751 AADTGKAKGTKLVVRNVAFEATRKDVAALFAPFGQIKSCRLPKKFDGS--HRGFAFVDFL 808
Query: 72 TKNEAK 77
TK EAK
Sbjct: 809 TKQEAK 814
>gi|268537328|ref|XP_002633800.1| C. briggsae CBR-RBD-1 protein [Caenorhabditis briggsae]
Length = 877
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 8 VKRKSSNVAKQ-TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
+KRK +Q +K+LVRN+PF+A EVE LF+ FG K +R+P+K HRGFG
Sbjct: 739 LKRKDVKQKEQGECTKLLVRNLPFEASIKEVETLFETFGAAKSIRIPRKPGQKLQHRGFG 798
Query: 67 FVEFITKNEAKRV 79
FVEFI+ +EA R
Sbjct: 799 FVEFISTDEAFRA 811
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVR--LPKKMVGSGLHRGFGFVEFI 71
+TG ++ +RN+P+ K+ +++ LFK +GE+ V+ + KK +G +GF VEF+
Sbjct: 277 ETG-RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVIIDKK---TGSCKGFAIVEFV 328
>gi|302843097|ref|XP_002953091.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
gi|300261802|gb|EFJ46013.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
Length = 762
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ S A +K++VRN+ F+A + +++ LF FG LK RLPKK GS HRGF FVEF
Sbjct: 642 RKSAAAGAGSTKLVVRNLAFEATKKDIQGLFNPFGHLKSCRLPKKFDGS--HRGFAFVEF 699
Query: 71 ITKNEAK 77
+TK EAK
Sbjct: 700 VTKQEAK 706
>gi|330935683|ref|XP_003305080.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
gi|311318026|gb|EFQ86793.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
Length = 825
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
G++A +R K +KI+++N+PF+A + +V LF +G+L+ VR+PKK S
Sbjct: 683 GADAAEERRNEDAAKKAASTKIIIKNLPFEASKKDVRALFTPYGQLRSVRVPKKFDASS- 741
Query: 62 HRGFGFVEFITKNEA 76
RGFGF EF TK +A
Sbjct: 742 -RGFGFAEFTTKRDA 755
>gi|189197515|ref|XP_001935095.1| multiple RNA-binding domain containing protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981043|gb|EDU47669.1| multiple RNA-binding domain containing protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 825
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
G++A +R K +KI+++N+PF+A + +V LF +G+L+ VR+PKK S
Sbjct: 683 GADAAEERRNEDAAKKAASTKIIIKNLPFEASKKDVRALFTPYGQLRSVRVPKKFDASS- 741
Query: 62 HRGFGFVEFITKNEA 76
RGFGF EF TK +A
Sbjct: 742 -RGFGFAEFTTKRDA 755
>gi|125591601|gb|EAZ31951.1| hypothetical protein OsJ_16124 [Oryza sativa Japonica Group]
Length = 867
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
N ++ +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVEF+TK
Sbjct: 737 NEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEFVTK 793
Query: 74 NEAK 77
EA+
Sbjct: 794 QEAQ 797
>gi|125549686|gb|EAY95508.1| hypothetical protein OsI_17353 [Oryza sativa Indica Group]
Length = 904
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
N ++ +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVEF+TK
Sbjct: 774 NEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEFVTK 830
Query: 74 NEAK 77
EA+
Sbjct: 831 QEAQ 834
>gi|38345802|emb|CAE03574.2| OSJNBa0085I10.19 [Oryza sativa Japonica Group]
gi|38568013|emb|CAE05198.3| OSJNBa0070C17.5 [Oryza sativa Japonica Group]
Length = 904
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
N ++ +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVEF+TK
Sbjct: 774 NEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEFVTK 830
Query: 74 NEAK 77
EA+
Sbjct: 831 QEAQ 834
>gi|115460478|ref|NP_001053839.1| Os04g0611500 [Oryza sativa Japonica Group]
gi|113565410|dbj|BAF15753.1| Os04g0611500, partial [Oryza sativa Japonica Group]
Length = 536
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
N ++ +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVEF+TK
Sbjct: 406 NEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEFVTK 462
Query: 74 NEAK 77
EA+
Sbjct: 463 QEAQ 466
>gi|294460856|gb|ADE76001.1| unknown [Picea sitchensis]
Length = 181
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
EA + K + +K + +KI+VRN+ F+A + ++ +LF FG++K +RLPKK S HR
Sbjct: 52 EAKSTHEKKYDKSK-SSTKIIVRNVAFEATKKDLSQLFSPFGQIKSLRLPKKADQS--HR 108
Query: 64 GFGFVEFITKNEAK 77
GF F+EF+TK EA+
Sbjct: 109 GFAFIEFVTKQEAE 122
>gi|321254501|ref|XP_003193094.1| rRNA primary transcript binding protein [Cryptococcus gattii WM276]
gi|317459563|gb|ADV21307.1| rRNA primary transcript binding protein, putative [Cryptococcus
gattii WM276]
Length = 773
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 2 GSEATTVKRKSSNV--AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-- 57
G+E +K+ + K +K+LV+N+PF+A + +V ELF A+G+LK +RLP+K V
Sbjct: 623 GAEDDRETKKAGDAEGGKTKSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPT 682
Query: 58 --GSGLHRGFGFVEFITKNEAKRV 79
G+ RGF F+EF T EA R
Sbjct: 683 STGAQSTRGFAFLEFTTHTEAARA 706
>gi|405118918|gb|AFR93691.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 752
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFIT 72
K +K+LV+N+PF+A + +V ELF A+G+LK +RLP+K V G+ RGF F+EF T
Sbjct: 619 KTKSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTT 678
Query: 73 KNEAKRV 79
EA R
Sbjct: 679 HTEAARA 685
>gi|302818104|ref|XP_002990726.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
gi|300141464|gb|EFJ08175.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
Length = 738
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
S A ++ S A+ + SK++VRN+ F+A + +++ LF FG++K V+LPKK G+ H
Sbjct: 616 SRAGDDEKPSKVDARGSSSKLIVRNVAFEATRKDLKLLFSPFGQVKKVKLPKKFDGN--H 673
Query: 63 RGFGFVEFITKNEAK 77
RGF FVEF+TK EA+
Sbjct: 674 RGFAFVEFVTKQEAQ 688
>gi|449303128|gb|EMC99136.1| hypothetical protein BAUCODRAFT_120428 [Baudoinia compniacensis
UAMH 10762]
Length = 822
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
G++A +R + + T +KI+++N+PF+A + +V LF AFG+L+ VR+PKKM +
Sbjct: 682 GADAAEERRHADAAKRGTKTKIIIKNLPFEATKKDVRALFGAFGQLRSVRVPKKMDRAA- 740
Query: 62 HRGFGFVEFITKNEAK 77
RGF F +F T EA+
Sbjct: 741 -RGFAFADFTTPKEAE 755
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 1 MGSEATTVKRKSSNV-AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP-KKMVG 58
+G+E T + +S+V A ++ ++ VRN+P+ A + ++E F+ FG L V + K G
Sbjct: 279 LGTETTRILDSASDVDAVRSSMRLFVRNLPYSATKEDLEAEFEPFGNLAAVHVSMSKKTG 338
Query: 59 SGLHRGFGFVEFITKNEAKRV 79
S +GF F+++ + A+R
Sbjct: 339 SA--KGFAFIQYSDADAAERA 357
>gi|58265434|ref|XP_569873.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|134109003|ref|XP_776616.1| hypothetical protein CNBC1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818289|sp|P0CR17.1|MRD1_CRYNB RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|338818290|sp|P0CR16.1|MRD1_CRYNJ RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|50259296|gb|EAL21969.1| hypothetical protein CNBC1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226105|gb|AAW42566.1| rRNA primary transcript binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 769
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV----GSGLHRGFGFVEFIT 72
K +K+LV+N+PF+A + +V ELF A+G+LK +RLP+K V G+ RGF F+EF T
Sbjct: 636 KTKSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTT 695
Query: 73 KNEAKRV 79
EA R
Sbjct: 696 HTEAARA 702
>gi|326437182|gb|EGD82752.1| hypothetical protein PTSG_03403 [Salpingoeca sp. ATCC 50818]
Length = 1027
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
V R+ + K +K++VRN+ F+A + ++ +LF +G++K VRLP K HRGF F
Sbjct: 897 VARREGKLIKGATTKVVVRNVAFEATKKDIRQLFTPYGDVKSVRLPPKSFDPTQHRGFAF 956
Query: 68 VEFITKNEAK 77
VEF +K EAK
Sbjct: 957 VEFSSKEEAK 966
>gi|406607411|emb|CCH41202.1| Multiple RNA-binding domain-containing protein 1 [Wickerhamomyces
ciferrii]
Length = 861
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
VK+ S+N K SKI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF F
Sbjct: 724 VKKTSTN--KAVSSKIIVKNLPFEASRKDVFELFNSFGQLKSVRVPKKFDKSA--RGFAF 779
Query: 68 VEFITKNEAK 77
VEF+ EA+
Sbjct: 780 VEFLIPKEAQ 789
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+T ++ +RN+ + +K+ E ELF +GEL+ V + +G +GF +++F+ ++A
Sbjct: 328 RTTGRLFLRNLLYSSKEEEFRELFSKYGELEEVHIAID-TRTGQSKGFAYIQFVNPDDA 385
>gi|403224006|dbj|BAM42136.1| uncharacterized protein TOT_040000506 [Theileria orientalis strain
Shintoku]
Length = 760
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
I+V+N+PFQA + E+ +LFK + +K VRLPK HRGFGFVEF++K++AK
Sbjct: 683 IIVKNLPFQATKKELSDLFKHYANVKTVRLPKS--AGNTHRGFGFVEFMSKSDAK 735
>gi|226504376|ref|NP_001146285.1| uncharacterized protein LOC100279860 [Zea mays]
gi|219886507|gb|ACL53628.1| unknown [Zea mays]
gi|413919482|gb|AFW59414.1| hypothetical protein ZEAMMB73_904714 [Zea mays]
Length = 881
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 8/73 (10%)
Query: 10 RKSSNVAKQTG-----SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
+K AK+ G +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRG
Sbjct: 742 KKDGQAAKKNGKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRG 798
Query: 65 FGFVEFITKNEAK 77
F FVE++TK EA+
Sbjct: 799 FAFVEYVTKQEAQ 811
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K++ ILV+N+PF + + E+ LF+ G L + LP V F V F+ EA
Sbjct: 534 KRSNYVILVKNLPFNSTEEELATLFQKHGSLDKIILPPTRV-------FALVVFVEATEA 586
Query: 77 K 77
+
Sbjct: 587 Q 587
>gi|145345423|ref|XP_001417211.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577438|gb|ABO95504.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 874
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ +KI+VRN+ F+A + ++++LF FG+LK VRLPKK G HRGF FVEF T+ E +
Sbjct: 767 SATKIVVRNVAFEATKRDIQKLFNPFGQLKQVRLPKKF--DGAHRGFAFVEFNTRRETQ 823
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 3 SEATTVKRKSSNVAK-----QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV 57
++A + K N A +TG +I VRN+P+ A + EV ELF+ FG+L V + +V
Sbjct: 312 TDAAEPESKDVNAADMEALSETG-RIFVRNLPYTATEEEVAELFEQFGKLTAVHI---LV 367
Query: 58 GSGLHR--GFGFVEFI 71
R G +V F+
Sbjct: 368 DRSTKRSKGLAYVTFV 383
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K++ +L++N+P++A++ E+ EL + FG + LP VEF+ +EA
Sbjct: 533 KRSNCVLLLKNLPYEAEEDELRELCEKFGGVARFILPDTHT-------IAVVEFLEASEA 585
Query: 77 KRV 79
+R
Sbjct: 586 RRA 588
>gi|328865472|gb|EGG13858.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 868
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+KI ++NI F+ K E+ +LF +GELK VRLP K G HRGFGFVE++T+ EAK
Sbjct: 762 TKISIKNIAFECKPIEIRKLFTTYGELKSVRLPSKPTGG--HRGFGFVEYLTEQEAK 816
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ S ILV+NIP + E+EE+F +GEL V LP R VEF NEAK
Sbjct: 507 RSNSIILVKNIPHKTTIGELEEMFGRYGELARVILPPA-------RTMALVEFYHVNEAK 559
>gi|340382975|ref|XP_003389993.1| PREDICTED: probable RNA-binding protein 19-like [Amphimedon
queenslandica]
Length = 866
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
+ AT+ K S + K +KIL+RN+PF+A + E+ +L FG++K +RLPKK
Sbjct: 729 AASATSHKVTKSLMPKGPKNKILIRNVPFEASRKELSQLLSTFGKIKNLRLPKKQNEPNS 788
Query: 62 HRGFGFVEFITKNEAK 77
HRGF FVE+ T +A+
Sbjct: 789 HRGFCFVEYSTTEDAR 804
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K++ + ILV+N+PF E+ ELF FG L V LP + + VE+ + + A
Sbjct: 540 KRSKNVILVKNLPFGTSTKELTELFAPFGSLSRVILPPAGISA-------LVEYSSSSNA 592
Query: 77 K 77
K
Sbjct: 593 K 593
>gi|242077146|ref|XP_002448509.1| hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
gi|241939692|gb|EES12837.1| hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
Length = 620
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 8/73 (10%)
Query: 10 RKSSNVAKQTG-----SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
+K AK+ G +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRG
Sbjct: 481 KKDGQAAKKNGKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRG 537
Query: 65 FGFVEFITKNEAK 77
F FVE++TK EA+
Sbjct: 538 FAFVEYVTKQEAQ 550
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K++ ILV+N+PF + + E+ +F+ G L + LP V F V F+ EA
Sbjct: 273 KRSNHVILVKNLPFNSTEEELAAMFQKHGSLDKIILPPTRV-------FALVVFVEATEA 325
Query: 77 K 77
+
Sbjct: 326 R 326
>gi|118375162|ref|XP_001020766.1| probable RNA-binding protein [Tetrahymena thermophila]
gi|89302533|gb|EAS00521.1| probable RNA-binding protein [Tetrahymena thermophila SB210]
Length = 718
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+RK V +K+++RN+ F+ + EV +L K +GE+K VRLPKKM +G HRGF F
Sbjct: 628 ERKQKQVDIPISTKLVIRNLAFECTKKEVRDLLKVYGEVKSVRLPKKM--NGQHRGFAFA 685
Query: 69 EFITKNEAKRV 79
EF + EAK
Sbjct: 686 EFSSAEEAKNA 696
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S+N ++ V N+P+ + EV+++F+ +G+L +++PK G RGF ++ +
Sbjct: 241 SNNDPMIDDCRLYVLNLPYDITEEEVKDVFRKYGKLLEIKMPKG--KGGQFRGFAYITYS 298
Query: 72 TKNEAKRV 79
EA R
Sbjct: 299 MAGEAMRA 306
>gi|156054690|ref|XP_001593271.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980]
gi|154703973|gb|EDO03712.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 842
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G++A KRK K G +K++V+N+PF+A +S++ +LF +G+L+ VR+PKK S
Sbjct: 698 GADAAEEKRKEDRAKKLAGKRTKLIVKNLPFEASKSDIRKLFGTYGQLRSVRMPKKFDHS 757
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +FIT EA+
Sbjct: 758 T--RGFAFADFITAREAE 773
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++ VRN+P+ A + ++ + F+ +G L+ + LP + G +GF V++ N A
Sbjct: 316 RLFVRNLPYSATEDDLRKHFEQYGALEEIHLP--VDAKGASKGFVLVQYTDPNAA 368
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRL-----PKKMVGSGLHRGFGFVEFITKNE 75
+ + VRN+ F + E+FK R+ PKK G L GFGF+EF TK++
Sbjct: 614 TTLFVRNLNFSTTSQRLTEVFKPLDGFLSARVNTKTDPKK-PGQVLSMGFGFIEFRTKSQ 672
Query: 76 AK 77
A+
Sbjct: 673 AQ 674
>gi|154296406|ref|XP_001548634.1| hypothetical protein BC1G_13029 [Botryotinia fuckeliana B05.10]
gi|347839105|emb|CCD53677.1| similar to multiple RNA-binding domain-containing protein 1
[Botryotinia fuckeliana]
Length = 838
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G++A KRK K G +K++V+N+PF+A +S++ +LF +G+L+ VR+PKK S
Sbjct: 694 GADAAEEKRKEDRAKKLAGKRTKLIVKNLPFEASKSDIRKLFGTYGQLRSVRMPKKFDHS 753
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +FIT EA+
Sbjct: 754 T--RGFAFADFITAREAE 769
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++ VRN+P+ A + ++ + F+ +G L+ + LP + G +GF V++ N A
Sbjct: 312 RLFVRNLPYSATEDDLRKHFEQYGTLEEIHLP--VDAKGASKGFVLVQYTDPNAA 364
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL-----PKKMVGSGLHRGF 65
+ S V + + VRN+ F + E+FK R+ PKK G L GF
Sbjct: 600 RDSGVENVDTTTLFVRNLNFSTTSQRLTEIFKPLDGFLSARVNTKTDPKK-PGQVLSMGF 658
Query: 66 GFVEFITKNEAK 77
GF+EF TK++A+
Sbjct: 659 GFIEFRTKSQAQ 670
>gi|213403304|ref|XP_002172424.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212000471|gb|EEB06131.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 804
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
G++A RK+ G+KIL++N+PF+A + +V LF A+G+L+ VR+PKK +
Sbjct: 669 GADAAAETRKADEKRHVKGTKILIKNLPFEATKKDVVSLFGAYGQLRSVRVPKKFDRTA- 727
Query: 62 HRGFGFVEFITKNEAK 77
RGF F EF+T EA+
Sbjct: 728 -RGFAFAEFVTAREAE 742
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLP--KKMVGSGLHRGFGFVEFITKNEAKRV 79
++ +RN+ + ++ ++ ELF+ +G L+ V +P KK + +GF +VEF K++A R
Sbjct: 288 RLFLRNLTYSCQEDDIVELFQDYGALEQVHVPVDKK---TNAPKGFAYVEFKNKDDAIRA 344
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAF-GELKFV--RLPKKMVGSGLHRGFGFVEFITKNEA 76
S + V+NI F Q++ + +F + G L V P K G + GFGFVEF +K +A
Sbjct: 586 STLFVKNISFSTSQTDFQRIFASLNGFLSAVIRAKPSKRPGQLMSMGFGFVEFRSKEDA 644
>gi|261188230|ref|XP_002620531.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239593278|gb|EEQ75859.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239609317|gb|EEQ86304.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ER-3]
gi|327354414|gb|EGE83271.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ATCC
18188]
Length = 825
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 4 EATTVKRKSSNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
+A +R+ N K G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K G+
Sbjct: 683 DAAEERRRQDNAKKLAMRGTKILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDGTA- 741
Query: 62 HRGFGFVEFITKNEAK 77
RGF F +F++ EA+
Sbjct: 742 -RGFAFADFVSAREAE 756
>gi|449505035|ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Cucumis sativus]
Length = 826
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+Q+ +K+LVRN+ F+A ++ +LF +G++K +RLP K G HRGF FVEF+TK EA
Sbjct: 702 EQSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKF---GKHRGFAFVEFVTKQEA 758
Query: 77 K 77
+
Sbjct: 759 Q 759
>gi|378731298|gb|EHY57757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 763
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTGS---KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ ++AK+ S KI+++N+PF+A + ++ LF A+G+L+ VRLPKK S RGF
Sbjct: 624 ERRKEDIAKKLDSNKTKIVIKNLPFEATKKDIRALFGAYGQLRTVRLPKKFDNSA--RGF 681
Query: 66 GFVEFITKNEAK 77
F EF+T EA+
Sbjct: 682 AFAEFVTPKEAE 693
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFG---ELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+++ +RN+PF AK+ ++ + F FG E+ V +K+ G GL +V+F+ +A
Sbjct: 245 NARLFIRNLPFDAKEGDLRKTFAPFGRVSEVHIVTDTRKLTGKGL----AYVQFVEPADA 300
Query: 77 KRV 79
++
Sbjct: 301 EKA 303
>gi|449464088|ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+Q+ +K+LVRN+ F+A ++ +LF +G++K +RLP K G HRGF FVEF+TK EA
Sbjct: 699 EQSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKF---GKHRGFAFVEFVTKQEA 755
Query: 77 K 77
+
Sbjct: 756 Q 756
>gi|297738037|emb|CBI27238.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ +K++VRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVEF+TK EA+
Sbjct: 643 KSSTKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEFVTKQEAQ 699
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR--GFGFVEFITKNE 75
+TG ++ VRN+P+ A + E+EELF FG + V L +V R G +V F
Sbjct: 227 ETG-RLFVRNLPYTATEDELEELFSKFGNVSQVHL---VVNKDTKRSKGIAYVLFTLPES 282
Query: 76 AKRV 79
A R
Sbjct: 283 AVRA 286
>gi|84996687|ref|XP_953065.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304061|emb|CAI76440.1| hypothetical protein, conserved [Theileria annulata]
Length = 716
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K+ I+V+N+PFQA + E+ ELFK + +K VR+PK HRGFGFV F++KN+A
Sbjct: 632 KEENDVIIVKNLPFQATKKELLELFKYYANVKTVRIPKS--AGNTHRGFGFVVFMSKNDA 689
Query: 77 K 77
K
Sbjct: 690 K 690
>gi|359472780|ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
Length = 983
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ +K++VRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVEF+TK EA+
Sbjct: 859 KSSTKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF---GSHRGFAFVEFVTKQEAQ 915
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL 52
+TG ++ VRN+P+ A + E+EELF FG + V L
Sbjct: 443 ETG-RLFVRNLPYTATEDELEELFSKFGNVSQVHL 476
>gi|328852591|gb|EGG01736.1| hypothetical protein MELLADRAFT_23270 [Melampsora larici-populina
98AG31]
Length = 510
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ +K+LV+N+PF+ + E+ ELF +FG+LK VRLPKK+ RGFGF+E+ TK EA+
Sbjct: 417 SSTKLLVKNVPFETSKQELRELFGSFGKLKSVRLPKKL--DRKTRGFGFIEYTTKKEAE 473
>gi|19112391|ref|NP_595599.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|48474243|sp|O13620.1|MRD1_SCHPO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|2257512|dbj|BAA21408.1| hypothetical protein YPR112c [Schizosaccharomyces pombe]
gi|13810221|emb|CAC37370.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe]
Length = 833
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A V+++ S +K G+KIL++N+PF+A + +V+ L A+G+L+ VR+PKK S RG
Sbjct: 707 AAEVRKQDS--SKPKGTKILIKNLPFEATKKDVQSLLGAYGQLRSVRVPKKFDRSA--RG 762
Query: 65 FGFVEFITKNEA 76
F F EF+T EA
Sbjct: 763 FAFAEFVTAREA 774
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 48/87 (55%), Gaps = 13/87 (14%)
Query: 3 SEATTVKRKSSNVAKQTGS--------KILVRNIPFQAKQSEVEELFKAFGELKFVRLP- 53
++A+ +++ +NV++Q + ++ +RN+ + + +++ LF FG+L+ V +P
Sbjct: 297 ADASMLQKAENNVSEQERNIQLISETKRLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPI 356
Query: 54 -KKMVGSGLHRGFGFVEFITKNEAKRV 79
KK +GF +++F ++A R
Sbjct: 357 DKKTNNP---KGFAYIDFHDADDAVRA 380
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 4 EATTVKR-KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAF-GELKFV---RLPKKMVG 58
EATT ++ + ++ + I V+N+ F KQ E +++FK G L V + K G
Sbjct: 601 EATTSEKVGTEDIESLDTATIYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPG 660
Query: 59 SGLHRGFGFVEFITKNEA 76
L GFGFVEF K A
Sbjct: 661 KYLSMGFGFVEFKDKASA 678
>gi|254580399|ref|XP_002496185.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
gi|238939076|emb|CAR27252.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
Length = 866
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 12 SSNVAKQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
S+N KQT KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF FV
Sbjct: 728 STNAPKQTRKKSGKIIVKNLPFEAARKDVFELFSSFGQLKSVRVPKKFDKSA--RGFAFV 785
Query: 69 EFITKNEAK 77
EF+ EA+
Sbjct: 786 EFLLPKEAE 794
>gi|290993156|ref|XP_002679199.1| RNA binding domain-containing protein [Naegleria gruberi]
gi|284092815|gb|EFC46455.1| RNA binding domain-containing protein [Naegleria gruberi]
Length = 763
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
T K++VRN+ F+A + ++ +LF A+G++K VRLPKK VGS HRGF F+EF++ E
Sbjct: 645 TFKKLVVRNVAFEATRQDLLQLFSAYGQVKTVRLPKK-VGSNSHRGFAFIEFVSPKEC 701
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
N + TG ++ V N+ F + E++ELF+ FGE+ + +P + + RG FV F+
Sbjct: 219 DENDDEDTG-RLFVYNLHFTTTEDELKELFEPFGEISELHIPIDN-ETKISRGVAFVHFL 276
Query: 72 TKNEAKRV 79
A +
Sbjct: 277 IPENADKA 284
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
Q + + ++N+ F+ + + ELFK++ + VR+ +V +G +GFGF EF EA
Sbjct: 538 QQSTVLFIKNLNFKTTEDSLRELFKSYNP-RSVRI---VVENGKSKGFGFAEFNNVKEA 592
>gi|164661195|ref|XP_001731720.1| hypothetical protein MGL_0988 [Malassezia globosa CBS 7966]
gi|159105621|gb|EDP44506.1| hypothetical protein MGL_0988 [Malassezia globosa CBS 7966]
Length = 824
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
+ V + +K+LV+N+PF+A + ++ ELF A G+LK VR+PK++ G RGF FVEF+
Sbjct: 677 DAPVQRAPSAKMLVKNVPFEATKKDIRELFGAHGQLKSVRVPKQV--HGRTRGFAFVEFV 734
Query: 72 TKNEAK 77
++ EA+
Sbjct: 735 SRREAE 740
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+++ VRN+P+ A + E+ F ++G ++ V +P S +G FV+F+ + A
Sbjct: 287 ARLFVRNLPYSATEDELASFFSSYGTVEQVHIPLD-AQSKASKGLAFVKFVDPSHA 341
>gi|315041593|ref|XP_003170173.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
gi|311345207|gb|EFR04410.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
Length = 799
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +RK N K + +KI+++N+PFQA + ++ LF A+G+L+ VR+PKK +
Sbjct: 657 GMDAAEQRRKEDNAKKASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDHT 716
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F++ EA+
Sbjct: 717 A--RGFAFADFVSSREAE 732
>gi|296478475|tpg|DAA20590.1| TPA: RNA binding motif protein 19 [Bos taurus]
Length = 825
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 34/50 (68%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK 54
A T RK KQT SKILVRNIPFQA E+ ELF FGELK VRLPK
Sbjct: 776 ALTSARKKQAPRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPK 825
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF AFG L L K G R FGF+ F ++ EA+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQ 56
>gi|449544221|gb|EMD35195.1| hypothetical protein CERSUDRAFT_116663 [Ceriporiopsis subvermispora
B]
Length = 788
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
K+ + K G+K++V+N+PF+A + ++ ELF A +LK VRLP+K RGF F+EF
Sbjct: 663 KAEDAVKAKGTKMIVKNVPFEATKKDIRELFSAHAQLKSVRLPRKFDHRA--RGFAFLEF 720
Query: 71 ITKNEAKRV 79
T EA R
Sbjct: 721 TTHAEAARA 729
>gi|303277453|ref|XP_003058020.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460677|gb|EEH57971.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 930
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ +KI+VRN+ F+A + ++++LF FG LK RLPKK G+ HRGF FVE TK EA
Sbjct: 810 SATKIVVRNVAFEATKRDIQKLFNPFGALKSCRLPKKFDGN--HRGFAFVELSTKREA 865
>gi|71028784|ref|XP_764035.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350989|gb|EAN31752.1| hypothetical protein, conserved [Theileria parva]
Length = 727
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
I+V+N+PFQA + E+ ELFK + +K VR+PK HRGFGFV F++KN+AK
Sbjct: 650 IIVKNLPFQATKKELLELFKYYSNVKTVRIPKS--AGNTHRGFGFVVFMSKNDAK 702
>gi|242802831|ref|XP_002484053.1| pre-rRNA processing protein Mrd1, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717398|gb|EED16819.1| pre-rRNA processing protein Mrd1, putative [Talaromyces stipitatus
ATCC 10500]
Length = 812
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ N K +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S
Sbjct: 669 GMDAAETRRQEDNAKKVAARRTKIIIKNLPFQATKHDVRSLFGAYGQLRSVRVPKKFDRS 728
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F++ EA+
Sbjct: 729 A--RGFAFADFVSSREAE 744
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAF-----GELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
S + VRN+ F + + E+F + ++K PK+ G L GFGFVEF TK +
Sbjct: 585 STLFVRNLNFSTTSARLTEVFSSLDGFLTAKVKTKTDPKR-PGETLSMGFGFVEFRTKEQ 643
Query: 76 AK 77
A+
Sbjct: 644 AQ 645
>gi|308802782|ref|XP_003078704.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116057157|emb|CAL51584.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 907
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ +K+++RN+ F+A + ++++LF FG+LK VRLPKK G HRGF FVEF T E +
Sbjct: 798 SATKLVIRNVAFEATKRDIQKLFNPFGQLKQVRLPKKF--DGAHRGFAFVEFNTARETQ 854
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR--GFGFVEF 70
+TG +I VRN+P+ A + EV ELF+ FG+L V + +V R G +V F
Sbjct: 360 ETG-RIFVRNLPYTATEEEVAELFEQFGKLSAVHI---LVDRSTKRSKGLAYVTF 410
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K++ +L++N+P++A + E++E+ + +G L LP VEF+ EA
Sbjct: 563 KRSNCVLLLKNLPYEADEDELKEMCEKYGGLARFILPDTHT-------IAVVEFLEAAEA 615
Query: 77 KRV 79
+R
Sbjct: 616 RRA 618
>gi|255582596|ref|XP_002532080.1| RNA binding motif protein, putative [Ricinus communis]
gi|223528250|gb|EEF30303.1| RNA binding motif protein, putative [Ricinus communis]
Length = 181
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
Query: 14 NVAK-QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 72
NV K ++ +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVE++T
Sbjct: 47 NVEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKRLRLPVKF---GNHRGFAFVEYVT 103
Query: 73 KNEAK 77
K EA+
Sbjct: 104 KQEAQ 108
>gi|224072369|ref|XP_002303703.1| predicted protein [Populus trichocarpa]
gi|222841135|gb|EEE78682.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ +K+LVRN+ F+A + ++ +LF FG++K +RLP K G HRGF FVE++TK EA+
Sbjct: 675 KSSTKLLVRNVAFEATEKDLRQLFGPFGQIKSLRLPMKF---GNHRGFAFVEYVTKQEAQ 731
>gi|426193530|gb|EKV43463.1| hypothetical protein AGABI2DRAFT_227175 [Agaricus bisporus var.
bisporus H97]
Length = 755
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
G E K K +K +K++V+N+PF+A + ++ +LF A G LK VRLPKK
Sbjct: 613 GVEEDEAKNKDGVNSKSRTTKVIVKNVPFEATKKDIRDLFSAHGHLKSVRLPKKF--DSR 670
Query: 62 HRGFGFVEFITKNEAK 77
RGF F+EF++++EA+
Sbjct: 671 TRGFAFLEFVSRHEAE 686
>gi|327298413|ref|XP_003233900.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
gi|326464078|gb|EGD89531.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
Length = 798
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A+ +R+ N K + +KI+++N+PFQA + ++ LF A+G+L+ VR+PKK +
Sbjct: 656 GMDASEQRRREDNAKKASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRT 715
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F++ EA+
Sbjct: 716 A--RGFAFADFVSSREAE 731
>gi|409076284|gb|EKM76657.1| hypothetical protein AGABI1DRAFT_122567 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 755
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
G E K K +K +K++V+N+PF+A + ++ +LF A G LK VRLPKK
Sbjct: 613 GVEEDEAKNKDGVNSKSRTTKVIVKNVPFEATKKDIRDLFSAHGHLKSVRLPKKF--DSR 670
Query: 62 HRGFGFVEFITKNEAK 77
RGF F+EF++++EA+
Sbjct: 671 TRGFAFLEFVSRHEAE 686
>gi|444723045|gb|ELW63710.1| putative RNA-binding protein 19 [Tupaia chinensis]
Length = 143
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 31/36 (86%)
Query: 44 FGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
FGELK VRLPKKM G+G HRGFGFV+F+TK +AKR
Sbjct: 36 FGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRA 71
>gi|367001456|ref|XP_003685463.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
gi|357523761|emb|CCE63029.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
Length = 872
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Query: 13 SNVAKQTGS-KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
SNV+++ S KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF FVEF+
Sbjct: 737 SNVSQRKPSGKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSA--RGFAFVEFL 794
Query: 72 TKNEAK 77
EA+
Sbjct: 795 LPKEAE 800
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ +K+LV+N+PF+ EV ELF+ +G L+ VRLPKK+ G ++GF FVE+ TK EA
Sbjct: 613 KVSNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKV--DGQNKGFAFVEYATKQEA 669
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+I + N+PF + ++ + F FG + + LP + + +GFGFV F+ +A
Sbjct: 187 RIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKI-TKKSKGFGFVLFVVPQDA 240
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K++ + I+V+NI A EV+ LF+ FG LK +PK + VEF N+A
Sbjct: 365 KRSNNIIIVKNIAASAIDLEVKSLFEKFGTLKQFLMPK-------SKALALVEFEVANDA 417
Query: 77 K 77
K
Sbjct: 418 K 418
>gi|259150262|emb|CAY87065.1| Mrd1p [Saccharomyces cerevisiae EC1118]
Length = 887
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 6/78 (7%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S++ K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S
Sbjct: 748 ASQSGNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA- 802
Query: 62 HRGFGFVEFITKNEAKRV 79
RGF FVEF+ EA+ V
Sbjct: 803 -RGFAFVEFLLPKEAENV 819
>gi|407393203|gb|EKF26533.1| hypothetical protein MOQ_009766 [Trypanosoma cruzi marinkellei]
Length = 878
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 5/63 (7%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 76
K++V+N+PF+A + ++ +LF AF E++ VRLP+K HRGF FVEF+++ EA
Sbjct: 792 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHQFSSHRENNHRGFAFVEFLSEEEA 851
Query: 77 KRV 79
KR
Sbjct: 852 KRA 854
>gi|365762580|gb|EHN04114.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 887
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 6/78 (7%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S++ K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S
Sbjct: 748 ASQSGNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA- 802
Query: 62 HRGFGFVEFITKNEAKRV 79
RGF FVEF+ EA+ V
Sbjct: 803 -RGFAFVEFLLPKEAENV 819
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ +K+LV+N+PF+ EV ELF+ +G L+ VRLPKK+ G ++GF FVE+ TK EA
Sbjct: 601 KVSNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKV--DGQNKGFAFVEYATKQEA 657
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+I + N+PF + ++ + F FG + + LP + + +GFGFV F+ +A
Sbjct: 188 RIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKI-TKKSKGFGFVLFVVPQDA 241
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K + + I+V+NI A + EV+ LF+ FG LK +PK + VEF N+A
Sbjct: 366 KCSNNIIIVKNIAASAIELEVKSLFEKFGTLKQFLMPK-------SKALALVEFEVANDA 418
Query: 77 K 77
K
Sbjct: 419 K 419
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ +K+LV+N+PF+ EV ELF+ +G L+ VRLPKK+ G ++GF FVE+ TK EA
Sbjct: 601 KVSNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKV--DGQNKGFAFVEYATKQEA 657
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+I + N+PF + ++ + F FG + + LP + + +GFGFV F+ +A
Sbjct: 188 RIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKI-TKKSKGFGFVLFVVPQDA 241
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K++ + I+V+NI A + EV+ LF+ FG LK +PK + VEF N+A
Sbjct: 366 KRSNNIIIVKNIAASAIELEVKSLFEKFGTLKQFLMPK-------SKALALVEFEVANDA 418
Query: 77 K 77
K
Sbjct: 419 K 419
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+K+LV+N+PF+ EV ELF+ +G L+ VRLPKK+ G ++GF FVE+ TK EA
Sbjct: 615 SNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKV--DGQNKGFAFVEYATKQEA 669
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+I + N+PF + ++ + F FG + + LP + + +GFGFV F+ +A
Sbjct: 187 RIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKI-TKKSKGFGFVLFVVPQDA 240
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 38/60 (63%), Gaps = 8/60 (13%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFG---ELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+I+++N+P +A + +++ F+ FG + K +R P+ G+ R FGF+ F +++A+
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQ-----GVSRKFGFIGFENEDQAQ 56
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K++ + I+V+NI A EV+ LF+ FG LK +PK + VEF N+A
Sbjct: 365 KRSNNIIIVKNIAASAIDLEVKSLFEKFGTLKQFLMPK-------SKALALVEFEIANDA 417
Query: 77 K 77
K
Sbjct: 418 K 418
>gi|326474597|gb|EGD98606.1| pre-rRNA processing protein Mrd1 [Trichophyton tonsurans CBS
112818]
Length = 798
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ N K + +KI+++N+PFQA + ++ LF A+G+L+ VR+PKK +
Sbjct: 656 GMDAAEQRRREDNTKKASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRT 715
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F++ EA+
Sbjct: 716 A--RGFAFADFVSSREAE 731
>gi|392585482|gb|EIW74821.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 834
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+K++V+N+PF+A + ++ ELF A G+LK VRLPKK RGF F+EF+T+ EA+
Sbjct: 713 TKMIVKNVPFEASKKDIRELFGAHGQLKSVRLPKKF--DSRSRGFAFLEFLTRQEAE 767
>gi|71652574|ref|XP_814940.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879958|gb|EAN93089.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 878
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 5/63 (7%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 76
K++V+N+PF+A + ++ +LF AF E++ VRLP+K HRGF FVEF+++ EA
Sbjct: 792 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHHFSSHRENNHRGFAFVEFLSEEEA 851
Query: 77 KRV 79
KR
Sbjct: 852 KRA 854
>gi|336364271|gb|EGN92632.1| hypothetical protein SERLA73DRAFT_190814 [Serpula lacrymans var.
lacrymans S7.3]
Length = 780
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K +K++V+N+PF+A + ++ ELF A G+LK VRLPKK RGF F+EF+T++EA
Sbjct: 655 KSNTTKMIVKNMPFEATKKDIRELFGAHGQLKSVRLPKKF--DSRSRGFAFLEFVTRHEA 712
Query: 77 K 77
+
Sbjct: 713 E 713
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 6 TTVKRKSSNVAKQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP 53
T + + + K+T S++ +RN+ F SE+ ELF+ FGE+ V +P
Sbjct: 232 TAIPEEEKDPTKETILQTSRLFLRNLAFSCTDSELMELFQPFGEISQVHIP 282
>gi|358372076|dbj|GAA88681.1| pre-rRNA processing protein Mrd1 [Aspergillus kawachii IFO 4308]
Length = 825
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGF
Sbjct: 687 ERRREDTAKKVAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGF 744
Query: 66 GFVEFITKNEAK 77
GF +F++ EA+
Sbjct: 745 GFADFVSAREAE 756
>gi|336387594|gb|EGO28739.1| hypothetical protein SERLADRAFT_459485 [Serpula lacrymans var.
lacrymans S7.9]
Length = 780
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K +K++V+N+PF+A + ++ ELF A G+LK VRLPKK RGF F+EF+T++EA
Sbjct: 655 KSNTTKMIVKNMPFEATKKDIRELFGAHGQLKSVRLPKKF--DSRSRGFAFLEFVTRHEA 712
Query: 77 K 77
+
Sbjct: 713 E 713
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 6 TTVKRKSSNVAKQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP 53
T + + + K+T S++ +RN+ F SE+ ELF+ FGE+ V +P
Sbjct: 232 TAIPEEEKDPTKETILQTSRLFLRNLAFSCTDSELMELFQPFGEISQVHIP 282
>gi|71423762|ref|XP_812563.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70877357|gb|EAN90712.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 879
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 5/63 (7%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 76
K++V+N+PF+A + ++ +LF AF E++ VRLP+K HRGF FVEF+++ EA
Sbjct: 793 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHQFSSHRENNHRGFAFVEFLSEEEA 852
Query: 77 KRV 79
KR
Sbjct: 853 KRA 855
>gi|67516279|ref|XP_658025.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|74681510|sp|Q5BGA9.1|MRD1_EMENI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|40747364|gb|EAA66520.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|259489335|tpe|CBF89520.1| TPA: Multiple RNA-binding domain-containing protein 1
[Source:UniProtKB/Swiss-Prot;Acc:Q5BGA9] [Aspergillus
nidulans FGSC A4]
Length = 819
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +RK K +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S
Sbjct: 676 GMDAAEERRKEDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRS 735
Query: 60 GLHRGFGFVEFITKNEAK 77
RGFGF +F++ EA+
Sbjct: 736 A--RGFGFADFVSAREAE 751
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 3 SEATTVKRKSSNVAK-QTGSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGS 59
++A T +N+ + +++ VRN+ ++ K+SE+E +F FG+++ V + S
Sbjct: 276 TKAPTAAEVDTNIENIRISARLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTS 335
Query: 60 GLHRGFGFVEFITKNEA 76
+GF +V++ + A
Sbjct: 336 ---KGFAYVQYADPDAA 349
>gi|429859384|gb|ELA34169.1| pre-rRNA processing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 866
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ K G +KI+++N+PF+A + ++ LF +G+L+ VRLPKK S
Sbjct: 721 GQDAAEERRREDKARKAAGQRTKIVIKNLPFEATKKDIRTLFSTYGQLRAVRLPKKFGNS 780
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F EF+T EA+
Sbjct: 781 --TRGFAFAEFVTPREAE 796
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S++ RN+ + + ++ F+ FGEL+ V LP + +G +G+ V+F + A
Sbjct: 339 SRLFARNLAYSVNEEDLRAHFEQFGELQEVHLP--VTATGASKGYAMVQFTNADSA 392
>gi|296818279|ref|XP_002849476.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
gi|238839929|gb|EEQ29591.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
Length = 808
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ N K + +KI+++N+PFQA + ++ LF A+G+L+ VR+PKK +
Sbjct: 666 GMDAAEQRRREDNAKKASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRT 725
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F++ EA+
Sbjct: 726 A--RGFAFADFVSSREAE 741
>gi|401888739|gb|EJT52690.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 2479]
Length = 1040
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK--MVGSGLH--RGFGFV 68
S K G+K+LV+N+PF+A + +V LF A+G LK +R+P+K M +G RGF F+
Sbjct: 904 SEEGKTKGTKLLVKNLPFEATKKDVRALFSAYGTLKSLRVPRKSTMSATGAQSTRGFAFL 963
Query: 69 EFITKNEAKRV 79
EF T EA+R
Sbjct: 964 EFTTHAEAQRA 974
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ ILV+NIPF +++++LF G+LK V LP G VEF+ +A R
Sbjct: 690 TTILVKNIPFGTTITQLQDLFAPHGDLKRVLLPPAGT-------IGVVEFVNNMDAGRA 741
>gi|302507734|ref|XP_003015828.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
gi|291179396|gb|EFE35183.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
Length = 826
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ N K + +KI+++N+PFQA + ++ LF A+G+L+ VR+PKK +
Sbjct: 684 GMDAAEQRRREDNAKKASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRT 743
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F++ EA+
Sbjct: 744 A--RGFAFADFVSSREAE 759
>gi|407835043|gb|EKF99127.1| hypothetical protein TCSYLVIO_009959 [Trypanosoma cruzi]
Length = 871
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 5/63 (7%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 76
K++V+N+PF+A + ++ +LF AF E++ VRLP+K HRGF FVEF+++ EA
Sbjct: 785 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHQFSSHRENNHRGFAFVEFLSEEEA 844
Query: 77 KRV 79
KR
Sbjct: 845 KRA 847
>gi|406697498|gb|EKD00757.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 1039
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKK--MVGSGLH--RGFGFV 68
S K G+K+LV+N+PF+A + +V LF A+G LK +R+P+K M +G RGF F+
Sbjct: 903 SEEGKTKGTKLLVKNLPFEATKKDVRALFSAYGTLKSLRVPRKSTMSATGAQSTRGFAFL 962
Query: 69 EFITKNEAKRV 79
EF T EA+R
Sbjct: 963 EFTTHAEAQRA 973
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ ILV+NIPF +++++LF G+LK V LP G VEF+ +A R
Sbjct: 689 TTILVKNIPFGTTITQLQDLFAPHGDLKRVLLPPAGT-------IGVVEFVNNMDAGRA 740
>gi|238486470|ref|XP_002374473.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
gi|220699352|gb|EED55691.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
Length = 826
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGF
Sbjct: 689 ERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGF 746
Query: 66 GFVEFITKNEAK 77
GF +F++ EA+
Sbjct: 747 GFADFVSAREAE 758
>gi|320593340|gb|EFX05749.1| pre-rRNA processing protein [Grosmannia clavigera kw1407]
Length = 970
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Query: 4 EATTVKRKSSNVAKQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
+A +R+S KQ GSK++++N+PF+A +V L +G++K VRLP+K VG+G
Sbjct: 778 DAAAERRESDRKRKQAANGGSKLIIKNLPFEATPKDVRTLLSTYGQVKAVRLPRK-VGNG 836
Query: 61 LHRGFGFVEFITKNEA 76
RG+ F EF+T +EA
Sbjct: 837 T-RGYAFAEFLTASEA 851
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
S++ +RN+P+ A ++ + + F+ FG +K V LP + +G ++GF V
Sbjct: 376 SRLFIRNLPYDATEAHIWKYFETFGPVKEVNLP--VTNAGANKGFAMV 421
>gi|302660785|ref|XP_003022068.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
gi|291185995|gb|EFE41450.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
Length = 968
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ N K + +KI+++N+PFQA + ++ LF A+G+L+ VR+PKK +
Sbjct: 826 GMDAAEQRRREDNAKKASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRT 885
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F++ EA+
Sbjct: 886 A--RGFAFADFVSSREAE 901
>gi|169771029|ref|XP_001819984.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
oryzae RIB40]
gi|83767843|dbj|BAE57982.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 825
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGF
Sbjct: 688 ERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGF 745
Query: 66 GFVEFITKNEAK 77
GF +F++ EA+
Sbjct: 746 GFADFVSAREAE 757
>gi|391867843|gb|EIT77082.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 826
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGF
Sbjct: 689 ERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGF 746
Query: 66 GFVEFITKNEAK 77
GF +F++ EA+
Sbjct: 747 GFADFVSAREAE 758
>gi|119496815|ref|XP_001265181.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
gi|119413343|gb|EAW23284.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
Length = 825
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGF
Sbjct: 687 ERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGF 744
Query: 66 GFVEFITKNEAK 77
GF +F++ EA+
Sbjct: 745 GFADFVSAREAE 756
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S++ VRN+P+ A +S++E +F FG+++ + + S +GF +V++I + A
Sbjct: 300 SSRLFVRNLPYDASESDLEPVFSKFGKVEEIHVAFD-TRSTTSKGFAYVQYIEPDAA 355
>gi|70990768|ref|XP_750233.1| pre-rRNA processing protein Mrd1 [Aspergillus fumigatus Af293]
gi|74669789|sp|Q4WJT7.1|MRD1_ASPFU RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|66847865|gb|EAL88195.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
Af293]
Length = 825
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGF
Sbjct: 687 ERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGF 744
Query: 66 GFVEFITKNEAK 77
GF +F++ EA+
Sbjct: 745 GFADFVSAREAE 756
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S++ VRN+P+ A +S++E +F FG+++ + + S +GF +V++I + A
Sbjct: 300 SSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFD-TRSTTSKGFAYVQYIEPDAA 355
>gi|159130709|gb|EDP55822.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
A1163]
Length = 825
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGF
Sbjct: 687 ERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGF 744
Query: 66 GFVEFITKNEAK 77
GF +F++ EA+
Sbjct: 745 GFADFVSAREAE 756
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S++ VRN+P+ A +S++E +F FG+++ + + S +GF +V++I + A
Sbjct: 300 SSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFD-TRSTTSKGFAYVQYIEPDAA 355
>gi|255716874|ref|XP_002554718.1| KLTH0F11968p [Lachancea thermotolerans]
gi|238936101|emb|CAR24281.1| KLTH0F11968p [Lachancea thermotolerans CBS 6340]
Length = 879
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
GS A T S K++ KI+V+N+PF+A++ +V ELF +FG+LK VR+PKK S
Sbjct: 736 GSAAPT----SGQSKKKSSGKIVVKNLPFEAERKQVFELFSSFGQLKSVRVPKKFDKST- 790
Query: 62 HRGFGFVEFITKNEAK 77
RGF FVEF+ EA+
Sbjct: 791 -RGFAFVEFLLPKEAE 805
>gi|225563037|gb|EEH11316.1| multiple RNA-binding domain-containing protein [Ajellomyces
capsulatus G186AR]
Length = 801
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 4 EATTVKRKSSNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
+A +R+ N K G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K +
Sbjct: 657 DAAEERRREDNAKKLAMRGTKILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDRTA- 715
Query: 62 HRGFGFVEFITKNEAK 77
RGF F +FI+ EA+
Sbjct: 716 -RGFAFADFISAREAE 730
>gi|326485490|gb|EGE09500.1| pre-rRNA processing protein Mrd1 [Trichophyton equinum CBS 127.97]
Length = 835
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ N K + +KI+++N+PFQA + ++ LF A+G+L+ VR+PKK +
Sbjct: 693 GMDAAEQRRREDNTKKVSAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRT 752
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F++ EA+
Sbjct: 753 A--RGFAFADFVSSREAE 768
>gi|401623161|gb|EJS41268.1| mrd1p [Saccharomyces arboricola H-6]
Length = 886
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S+ + K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S
Sbjct: 747 ASQNNSTKTKSN---KRSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA- 801
Query: 62 HRGFGFVEFITKNEAK 77
RGF FVEF+ EA+
Sbjct: 802 -RGFAFVEFLLPKEAE 816
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
++ +RNI + +K+ + +ELF +FGEL+ V + +G +GF +V F
Sbjct: 346 RLFLRNILYTSKEEDFKELFSSFGELEEVHVALD-TRTGQSKGFAYVLF 393
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAF-----GELKFVRLPKKMVGSGLHRGFGFV 68
+VA I ++N+ F ++ + FK F ++K PK G L GFGFV
Sbjct: 655 DVADGPTVSIFIKNLNFSTTNQDLSDRFKVFTGFVVAQVKTKPDPKHQ-GKTLSMGFGFV 713
Query: 69 EFITKNEAKRV 79
EF TK +A V
Sbjct: 714 EFRTKEQANAV 724
>gi|240279857|gb|EER43362.1| multiple RNA-binding domain-containing protein [Ajellomyces
capsulatus H143]
gi|325092985|gb|EGC46295.1| multiple RNA-binding domain-containing protein [Ajellomyces
capsulatus H88]
Length = 801
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 4 EATTVKRKSSNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
+A +R+ N K G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K +
Sbjct: 657 DAAEERRREDNAKKLAMRGTKILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDRTA- 715
Query: 62 HRGFGFVEFITKNEAK 77
RGF F +FI+ EA+
Sbjct: 716 -RGFAFADFISAREAE 730
>gi|409042979|gb|EKM52462.1| hypothetical protein PHACADRAFT_126290 [Phanerochaete carnosa
HHB-10118-sp]
Length = 767
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K +K++V+N+PF+A + ++ +LF A G+LK VRLPKK RGF F+EFIT++EA
Sbjct: 643 KSRTTKMIVKNVPFEATKKDIRDLFGAHGQLKSVRLPKKF--DHRSRGFAFLEFITRHEA 700
Query: 77 K 77
+
Sbjct: 701 E 701
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ + ILV+NIP+ ++ ELF+A G+L+ V +P G+ VEF+ +EA+
Sbjct: 428 RSDTTILVKNIPYGTSADQIRELFEAHGKLRRVLVPP--AGT-----MAVVEFVHSDEAR 480
Query: 78 RV 79
+
Sbjct: 481 KA 482
>gi|115388597|ref|XP_001211804.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
gi|114195888|gb|EAU37588.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
Length = 812
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGF
Sbjct: 675 ERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSA--RGF 732
Query: 66 GFVEFITKNEAK 77
GF +F++ EA+
Sbjct: 733 GFADFVSAREAE 744
>gi|154280340|ref|XP_001540983.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412926|gb|EDN08313.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 675
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 4 EATTVKRKSSNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
+A +R+ N K G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K +
Sbjct: 531 DAAEERRREDNAKKLAMRGTKILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDRTA- 589
Query: 62 HRGFGFVEFITKNEAK 77
RGF F +FI+ EA+
Sbjct: 590 -RGFAFADFISAREAE 604
>gi|361124073|gb|EHK96194.1| putative Multiple RNA-binding domain-containing protein 1 [Glarea
lozoyensis 74030]
Length = 763
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +RK K +G +KI+++N+PF+A + ++ LF +G+L+ VR+PKK S
Sbjct: 618 GVDAAEERRKEDRAKKISGKRTKIIIKNLPFEASKKDIRTLFGTYGQLRSVRMPKKFDHS 677
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +FIT EA+
Sbjct: 678 A--RGFAFADFITAREAE 693
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL-----PKKMV 57
S + ++R+S+N T + + VRN+ F + + E FK R+ PKK
Sbjct: 517 SASDLLERESANDGLDT-TTLFVRNLNFTTTSARLTETFKPLDGFLSARVNTKTDPKK-P 574
Query: 58 GSGLHRGFGFVEFITKNEAK 77
G L GFGF+EF TK++A+
Sbjct: 575 GQVLSMGFGFLEFRTKDQAQ 594
>gi|452844020|gb|EME45954.1| hypothetical protein DOTSEDRAFT_168162 [Dothistroma septosporum
NZE10]
Length = 822
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%), Gaps = 6/79 (7%)
Query: 2 GSEATTVKRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG 58
G++A +RK+ +VAK++ +KI+++N+PF+ + +V LF A+G+L+ VR+PKK+
Sbjct: 678 GADAAEERRKA-DVAKRSAARSTKIIIKNLPFETTKKDVRALFGAYGQLRSVRVPKKIDR 736
Query: 59 SGLHRGFGFVEFITKNEAK 77
+ RGF F EF T EA+
Sbjct: 737 AA--RGFAFAEFTTAKEAQ 753
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVR--LPKKMVGSGLHRGFGFVEFITKNEAKRV 79
++ VRN+P+ A++ ++E F+ FG L+ V L KK +G +GF F+++ + +++
Sbjct: 302 RLFVRNLPYDAQKEDLEAEFERFGNLEEVHIALDKK---TGTAKGFAFIQYSDPDSSEQA 358
>gi|365982081|ref|XP_003667874.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
gi|343766640|emb|CCD22631.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
Length = 843
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
+S+ K +KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF F+EF+
Sbjct: 734 TSSKNKTKSAKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGFAFIEFL 791
Query: 72 TKNEAK 77
EA+
Sbjct: 792 LPKEAE 797
>gi|255075605|ref|XP_002501477.1| predicted protein [Micromonas sp. RCC299]
gi|226516741|gb|ACO62735.1| predicted protein [Micromonas sp. RCC299]
Length = 951
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
+ +KI+VRN+ F+A + ++++LF FG LK RLPKK GS HRGF FVE TK
Sbjct: 833 SATKIVVRNVAFEATKRDIQKLFNPFGTLKSCRLPKKFDGS--HRGFAFVELSTK 885
>gi|310790005|gb|EFQ25538.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 846
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ K G +KI+++N+PF+A + ++ LF +G+L+ VRLPKK S
Sbjct: 700 GQDAAEERRREDKARKAAGQRTKIVIKNLPFEATKKDIRTLFGTYGQLRAVRLPKKFGNS 759
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F EF+T EA+
Sbjct: 760 --TRGFAFAEFVTPREAE 775
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+++ VRN+PF + +++ F +GEL+ V LP + +G +GF V+F++ A
Sbjct: 318 ARLFVRNLPFSTNEDDLQTHFGQYGELQEVHLP--VTAAGASKGFAMVQFMSGESA 371
>gi|363752183|ref|XP_003646308.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889943|gb|AET39491.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
Length = 855
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A+T K N+ KI+V+N+PF+A + ++ ELF +FG+LK VR+PKK S RG
Sbjct: 717 ASTAKTSKKNI----NGKIIVKNLPFEATRKDIFELFSSFGQLKSVRVPKKFDKSA--RG 770
Query: 65 FGFVEFITKNEAK 77
F FVEF+ EA+
Sbjct: 771 FAFVEFLLPKEAE 783
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFG-----ELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
+ I V+N+ F K ++ + FK+F ++K PK+ G GFGFVEF TK +
Sbjct: 630 TSIFVKNLNFSTKTEDLTDKFKSFAGFIVAQIKTKPDPKRK-GKTQSMGFGFVEFRTKEQ 688
Query: 76 AKRV 79
A V
Sbjct: 689 ANAV 692
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K +K++VRNI F+A EV++LF G + VRLP+K G HRGF F+EF TK EA
Sbjct: 1001 KAKSNKLVVRNIAFEATPKEVQQLFSPHGNIVSVRLPRKQY-DGTHRGFAFIEFSTKQEA 1059
Query: 77 K 77
+
Sbjct: 1060 R 1060
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEAKRV 79
++ VRN+P+ ++ E+ ELF+AFG L + +P + G + +GF F+ F+ A +
Sbjct: 540 RLFVRNLPYACREDELRELFEAFGPLSELHMP--IDGETKKPKGFAFITFVLPEHASQA 596
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGEL-KFVRLPKKMVGSGLHRGFGFVEF 70
+ + K++ + +LV+N+PF A++ + LF+A G+L FV P R VE+
Sbjct: 715 DTRIGKRSTTTLLVKNLPFAAEEKTLRPLFEAHGDLSNFVMPPS--------RTMALVEY 766
Query: 71 ITKNEAKR 78
+ +EA+R
Sbjct: 767 MEPSEARR 774
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM----VGSGLHRGFGFVEFITKNEA 76
S + V+N+ F + + F+ G ++ VR+ +K L GFGFVE+ ++ +A
Sbjct: 902 SSVFVKNLHFDTDEDALRHHFEGIGPIRSVRVARKPNPKEPSRPLSMGFGFVEYKSRQDA 961
Query: 77 KRV 79
R
Sbjct: 962 VRA 964
>gi|412990000|emb|CCO20642.1| predicted protein [Bathycoccus prasinos]
Length = 992
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ +K+++RN+ F+A + +V+ LF FG LK VR+PKK GS HRGF F+E+ T+ EA
Sbjct: 865 SATKLVLRNVAFEATKRDVQLLFNPFGVLKSVRVPKKFDGS--HRGFAFIEYTTQREA 920
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
E+ R++ +A+ S IL++N+P+++++S++ E+ + FG L + LP R
Sbjct: 611 ESAAESRENVKIARSQHS-ILIKNLPYESEESDLREMCEKFGTLSQLVLPST-------R 662
Query: 64 GFGFVEFITKNEAKRV 79
EF+ NEA+R
Sbjct: 663 TIAIAEFLESNEARRA 678
>gi|296412291|ref|XP_002835858.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629654|emb|CAZ80015.1| unnamed protein product [Tuber melanosporum]
Length = 772
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
++AK+T KI+++N+PF+A + E+ LF A+G L+ VR+PKK G+ RGFGF +F T
Sbjct: 645 SIAKRT--KIIIKNLPFEASKRELRALFSAYGTLRSVRVPKKFGGAT--RGFGFADFATA 700
Query: 74 NEAK 77
EA+
Sbjct: 701 REAQ 704
>gi|429329749|gb|AFZ81508.1| hypothetical protein BEWA_009200 [Babesia equi]
Length = 687
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 15 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
V +KI+V+N+ FQA +SE+ +LF +G +K VR+PK + HRGF FV+F+TK
Sbjct: 601 VIATASTKIIVKNLAFQATKSEIHKLFSFYGNIKSVRIPKSV--KNQHRGFAFVDFMTKQ 658
Query: 75 EA 76
EA
Sbjct: 659 EA 660
>gi|50546647|ref|XP_500793.1| YALI0B12276p [Yarrowia lipolytica]
gi|74689812|sp|Q6CEW9.1|MRD1_YARLI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49646659|emb|CAG83044.1| YALI0B12276p [Yarrowia lipolytica CLIB122]
Length = 828
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+++ K SKIL++N+PF+A + +V++LF AFG LK VR+PKK + RGF F E+
Sbjct: 693 ETTETKKAIDSKILIKNLPFEATKKDVQKLFGAFGSLKTVRVPKKF--NSESRGFAFAEY 750
Query: 71 ITKNEAKRV 79
++ EA+
Sbjct: 751 VSAKEAEHA 759
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
++TG ++ +RN+ + AK+ + +LF +GEL+ V LP +G +GF V+F
Sbjct: 298 RKTG-RLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPIN-TKTGQCKGFAHVQF 349
>gi|295673056|ref|XP_002797074.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226282446|gb|EEH38012.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 806
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
++A +R+ N K G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K +
Sbjct: 662 ATDAAEERRREDNAKKLAMRGTKILIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRT 721
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F++ EA+
Sbjct: 722 A--RGFAFADFVSAREAE 737
>gi|365757846|gb|EHM99718.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 879
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 6/75 (8%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
S+ + K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S
Sbjct: 741 SQNSNTKTKSN---KRSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA-- 794
Query: 63 RGFGFVEFITKNEAK 77
RGF FVEF+ EA+
Sbjct: 795 RGFAFVEFLLPKEAE 809
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAF-----GELKFVRLPKKMVGSGLHRGFGFV 68
++A+ I ++N+ F + + FKAF ++K PK G L GFGFV
Sbjct: 648 DIAEGPTVSIFIKNLNFSTTNQNLTDRFKAFSGFVVAQVKTKPDPKHQ-GKTLSMGFGFV 706
Query: 69 EFITKNEAKRV 79
EF TK +A V
Sbjct: 707 EFRTKEQANAV 717
>gi|256092948|ref|XP_002582139.1| rna binding motif protein [Schistosoma mansoni]
gi|353228818|emb|CCD74989.1| putative rna binding motif protein [Schistosoma mansoni]
Length = 692
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++VRNIPFQA Q E+ ELF+ G L VRLPKK SG HRGF FVEF T ++AK
Sbjct: 616 LIVRNIPFQATQKELIELFQPIGGLVNVRLPKKPT-SG-HRGFAFVEFDTLDKAK 668
>gi|343427578|emb|CBQ71105.1| probable RNA-binding protein [Sporisorium reilianum SRZ2]
Length = 866
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
KIL++N+PF+A + ++ +LF + G+LK VRLPKK S RGFGFVE+ T EA+
Sbjct: 729 KILIKNLPFEATKKDIRDLFASQGQLKSVRLPKKFDNST--RGFGFVEYTTVREAQ 782
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 14/74 (18%)
Query: 8 VKRKSSNVAKQT---------GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP--KKM 56
++RK+ A+Q ++ +RN+PF A + E++ F++FG +K V +P K+
Sbjct: 298 LQRKAEKAAEQDQKLVDQIMESGRLFIRNLPFAANEDEIQAFFESFGTVKQVHIPLDKQT 357
Query: 57 VGSGLHRGFGFVEF 70
S +G FV F
Sbjct: 358 KAS---KGLAFVSF 368
>gi|190408039|gb|EDV11304.1| multiple RNA-binding domain-containing protein 1 [Saccharomyces
cerevisiae RM11-1a]
Length = 887
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S++ K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S
Sbjct: 748 ASQSGNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA- 802
Query: 62 HRGFGFVEFITKNEAK 77
RGF FVEF+ EA+
Sbjct: 803 -RGFAFVEFLLPKEAE 817
>gi|323350239|gb|EGA84386.1| Mrd1p [Saccharomyces cerevisiae VL3]
Length = 887
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S++ K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S
Sbjct: 748 ASQSGNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA- 802
Query: 62 HRGFGFVEFITKNEAK 77
RGF FVEF+ EA+
Sbjct: 803 -RGFAFVEFLLPKEAE 817
>gi|151942889|gb|EDN61235.1| multiple RNA-binding domain containing protein [Saccharomyces
cerevisiae YJM789]
Length = 887
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S++ K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S
Sbjct: 748 ASQSGNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA- 802
Query: 62 HRGFGFVEFITKNEAK 77
RGF FVEF+ EA+
Sbjct: 803 -RGFAFVEFLLPKEAE 817
>gi|145228995|ref|XP_001388806.1| multiple RNA-binding domain-containing protein 1 [Aspergillus niger
CBS 513.88]
gi|134054902|emb|CAK36914.1| unnamed protein product [Aspergillus niger]
gi|350638000|gb|EHA26356.1| multiple RNA-binding domain-containing protein [Aspergillus niger
ATCC 1015]
Length = 825
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+P+K S RGF
Sbjct: 687 ERRREDTAKKVAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPQKFDRSA--RGF 744
Query: 66 GFVEFITKNEAK 77
GF +F++ EA+
Sbjct: 745 GFADFVSAREAE 756
>gi|440636620|gb|ELR06539.1| hypothetical protein GMDG_02173 [Geomyces destructans 20631-21]
Length = 841
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +RK K G +KI+V+N+PF+A + ++ LF +G+L+ VR+PKK +
Sbjct: 698 GVDAAEERRKEDRAKKLAGKRTKIIVKNLPFEASKKDIRTLFGTYGQLRSVRVPKKFDNT 757
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F EF+T EA+
Sbjct: 758 A--RGFAFAEFVTAREAE 773
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
++ VRN+P+ A + E+ F+ +G L+ + LP + SG +GF V++
Sbjct: 316 RLFVRNLPYTATEDELRVHFEKYGALEEIHLP--LDASGTSKGFVLVQY 362
Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 18 QTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRL-----PKKMVGSGLHRGFGFVE 69
QTG S + VRN+ F + E FK R+ PKK G L GFGF+E
Sbjct: 608 QTGADTSTLFVRNLSFNTTSDRLTETFKPLDGFMSARVNTKTDPKK-PGQVLSMGFGFLE 666
Query: 70 FITKNEAK 77
F +K +A+
Sbjct: 667 FRSKAQAQ 674
>gi|6325369|ref|NP_015437.1| Mrd1p [Saccharomyces cerevisiae S288c]
gi|74676381|sp|Q06106.1|MRD1_YEAST RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|914983|gb|AAB68082.1| Ypr112cp [Saccharomyces cerevisiae]
gi|285815635|tpg|DAA11527.1| TPA: Mrd1p [Saccharomyces cerevisiae S288c]
gi|392296115|gb|EIW07218.1| Mrd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 887
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S++ K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S
Sbjct: 748 ASQSGNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA- 802
Query: 62 HRGFGFVEFITKNEAK 77
RGF FVEF+ EA+
Sbjct: 803 -RGFAFVEFLLPKEAE 817
>gi|207340299|gb|EDZ68693.1| YPR112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269058|gb|EEU04395.1| Mrd1p [Saccharomyces cerevisiae JAY291]
Length = 887
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S++ K KS+ K++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S
Sbjct: 748 ASQSGNTKTKSN---KKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA- 802
Query: 62 HRGFGFVEFITKNEAK 77
RGF FVEF+ EA+
Sbjct: 803 -RGFAFVEFLLPKEAE 817
>gi|407925474|gb|EKG18485.1| hypothetical protein MPH_04287 [Macrophomina phaseolina MS6]
Length = 836
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +RK K G +K++++N+PF+A + ++ LF A+G+L+ VR+PKK S
Sbjct: 691 GLDAAEERRKEDKAKKAAGRQTKVIIKNLPFEATKKDIRALFGAYGQLRSVRVPKKFDAS 750
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F T EA+
Sbjct: 751 A--RGFAFADFTTPREAE 766
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP-KKMVGSGLHRGFGFVEFITKNE 75
+QTG ++ +RN+P+ + ++ + F +FG L+ V +P GSG +GF +V F N+
Sbjct: 305 RQTG-RLFLRNLPYDVSEDDLRDYFNSFGTLEEVHVPLDAKTGSG--KGFAYVLFEESND 361
Query: 76 AKRV 79
A R
Sbjct: 362 AVRA 365
>gi|302923914|ref|XP_003053775.1| hypothetical protein NECHADRAFT_30669 [Nectria haematococca mpVI
77-13-4]
gi|256734716|gb|EEU48062.1| hypothetical protein NECHADRAFT_30669 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ + G +KI+++N+PFQA + ++ LF +G+L+ VRLPKK
Sbjct: 693 GHDAAEERRREDKAKRAAGQRTKIIIKNLPFQATKKDIRSLFGTYGQLRSVRLPKK--AD 750
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F+T EA+
Sbjct: 751 YTPRGFAFADFVTPREAE 768
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
S++ VRN+P+ A + ++ E F+ FG L+ V LP SG +GF V F
Sbjct: 310 SRLFVRNLPYSATEEDLRETFEGFGTLEEVHLPANK--SGTSKGFALVLF 357
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM----VGSGLHRGFGFVEFITKNEA 76
+ + VRN+ F + + E F++ R+ KM G L GFGFVEF TK +A
Sbjct: 609 TSLFVRNLNFTTSTTRLAEAFQSLDGFVSARVKTKMDPKKPGQTLSMGFGFVEFRTKGQA 668
Query: 77 K 77
+
Sbjct: 669 Q 669
>gi|261330461|emb|CBH13445.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 857
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKN 74
G K++V+N+PF+A + ++ +LF A E++ VRLP+K HRGF FVEF+T+
Sbjct: 769 GLKLVVKNVPFEATERDIRDLFTAISEVRSVRLPRKSHQFSSHRENNHRGFAFVEFLTEE 828
Query: 75 EAKRV 79
EA+R
Sbjct: 829 EARRA 833
>gi|342182689|emb|CCC92168.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 861
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKN 74
G K++V+N+PF+A + ++ +LF A E++ VRLP+K HRGF FVEF+T+
Sbjct: 773 GLKLVVKNVPFEATERDIRDLFSAVSEVRSVRLPRKNNQFSSHRENNHRGFAFVEFLTEE 832
Query: 75 EAKRV 79
EA+R
Sbjct: 833 EARRA 837
>gi|255941010|ref|XP_002561274.1| Pc16g09620 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585897|emb|CAP93632.1| Pc16g09620 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 835
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + ++ LF A+G+L+ VR+P+K S RGF
Sbjct: 698 ERRREDTAKKVAARRTKIIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQKFDHSA--RGF 755
Query: 66 GFVEFITKNEAK 77
GF +F++ EA+
Sbjct: 756 GFADFVSAREAE 767
>gi|398398892|ref|XP_003852903.1| hypothetical protein MYCGRDRAFT_85600 [Zymoseptoria tritici IPO323]
gi|339472785|gb|EGP87879.1| hypothetical protein MYCGRDRAFT_85600 [Zymoseptoria tritici IPO323]
Length = 770
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
G+K+L++N+PF+A + +V LF A+G+L+ VR+PKKM + RGF F +F T EA+
Sbjct: 647 GTKLLIKNLPFEATKKDVRALFGAYGQLRSVRVPKKMNSAA--RGFAFADFTTVKEAQ 702
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP-KKMVGSGLHRGFGFVEFITKN 74
A ++ ++ VRN+PF ++ +++ F ++G L+ V +P G+G +GFG+++F +
Sbjct: 242 AVRSSMRLFVRNLPFNVQKEDLQAEFASYGNLEEVHVPLDPKTGAG--KGFGYIQFSNPD 299
Query: 75 EAKRV 79
A++
Sbjct: 300 SAEQA 304
>gi|146422677|ref|XP_001487274.1| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+KI+++N+PF+A + +V ELF AFG+LK VR+PKK S RGF FVEF+ EA+
Sbjct: 752 NKIIIKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSA--RGFAFVEFVLLKEAE 806
>gi|50285445|ref|XP_445151.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691154|sp|Q6FXP4.1|MRD1_CANGA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49524454|emb|CAG58051.1| unnamed protein product [Candida glabrata]
Length = 861
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF FVEF+ EA
Sbjct: 734 KAKNGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGFAFVEFVLPKEA 791
Query: 77 K 77
+
Sbjct: 792 E 792
>gi|121702823|ref|XP_001269676.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
gi|119397819|gb|EAW08250.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
Length = 822
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+P+K S RGF
Sbjct: 684 ERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPQKFDRSA--RGF 741
Query: 66 GFVEFITKNEAK 77
GF +F++ EA+
Sbjct: 742 GFADFVSAREAE 753
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S++ VRN+P+ AK+S++E +F +G+++ + + S +GF +V++ + A
Sbjct: 297 SSRLFVRNLPYDAKESDLEPIFSKYGKVEEIHVAFD-TRSTTSKGFAYVQYFDADAA 352
>gi|190344798|gb|EDK36553.2| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+KI+++N+PF+A + +V ELF AFG+LK VR+PKK S RGF FVEF+ EA+
Sbjct: 752 NKIIIKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSA--RGFAFVEFVLLKEAE 806
>gi|403165616|ref|XP_003325592.2| hypothetical protein PGTG_07425 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165799|gb|EFP81173.2| hypothetical protein PGTG_07425 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 759
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K +K+L++N+PF+ + E+ ELF +G+LK +RLPKK+ RGFGFVE+ TK EA
Sbjct: 631 KTATNKLLIKNLPFEINKKELYELFGVYGKLKSIRLPKKLDRKS--RGFGFVEYHTKKEA 688
Query: 77 K 77
+
Sbjct: 689 Q 689
>gi|72392895|ref|XP_847248.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176082|gb|AAX70201.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70803278|gb|AAZ13182.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 857
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKN 74
G K++V+N+PF+A + ++ +LF A E++ VRLP+K HRGF FVEF+T+
Sbjct: 769 GLKLVVKNVPFEATERDIRDLFTAVSEVRSVRLPRKSHQFSSHRENNHRGFAFVEFLTEE 828
Query: 75 EAKRV 79
EA+R
Sbjct: 829 EARRA 833
>gi|410075077|ref|XP_003955121.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
gi|372461703|emb|CCF55986.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
Length = 850
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF FVEF+ EA+
Sbjct: 724 KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGFAFVEFLLPKEAE 777
>gi|226292390|gb|EEH47810.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 820
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 4 EATTVKRKSSNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
+A +R+ N K G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K +
Sbjct: 678 DAAEERRREDNAKKLAMRGTKILIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTA- 736
Query: 62 HRGFGFVEFITKNEAK 77
RGF F +FI+ EA+
Sbjct: 737 -RGFAFADFISVREAE 751
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+Q + ILV+N F K ++ +LF++FGE+K + +P SG VEF +E
Sbjct: 471 EQGNTAILVKNFSFSVKAEDLRKLFESFGEIKRLLMPP----SGT---IAIVEFALADEC 523
Query: 77 KRV 79
++
Sbjct: 524 QKA 526
>gi|156849149|ref|XP_001647455.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
gi|156118141|gb|EDO19597.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
Length = 863
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
KQ+G KI+V+N+PF+A + ++ +LF +FG+LK VR+PKK S RGF F+EF+ EA
Sbjct: 735 KQSG-KIIVKNLPFEATRKDIFDLFSSFGQLKSVRVPKKFDKSA--RGFAFIEFLLPKEA 791
Query: 77 K 77
+
Sbjct: 792 E 792
>gi|225680707|gb|EEH18991.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb03]
Length = 805
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 4 EATTVKRKSSNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
+A +R+ N K G+KIL++N+PFQA + ++ LF A+G+L+ VR+P+K +
Sbjct: 663 DAAEERRREDNAKKLAMRGTKILIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTA- 721
Query: 62 HRGFGFVEFITKNEAK 77
RGF F +FI+ EA+
Sbjct: 722 -RGFAFADFISVREAE 736
>gi|50307487|ref|XP_453723.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690224|sp|Q6CQR6.1|MRD1_KLULA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49642857|emb|CAH00819.1| KLLA0D14949p [Kluyveromyces lactis]
Length = 878
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF FVEF+ EA+
Sbjct: 753 KIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSA--RGFAFVEFLLPKEAE 806
>gi|212540104|ref|XP_002150207.1| pre-rRNA processing protein Mrd1, putative [Talaromyces marneffei
ATCC 18224]
gi|210067506|gb|EEA21598.1| pre-rRNA processing protein Mrd1, putative [Talaromyces marneffei
ATCC 18224]
Length = 812
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 10 RKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
R+ + AK+ +KI+++N+PFQA + +V LF A+G+L+ VR+PKK S RGF
Sbjct: 676 RRQEDTAKKVAARRTKIIIKNLPFQATKHDVRSLFGAYGQLRSVRVPKKFDRSA--RGFA 733
Query: 67 FVEFITKNEAK 77
F +F++ EA+
Sbjct: 734 FADFVSSREAE 744
>gi|349581915|dbj|GAA27072.1| K7_Mrd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 887
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF FVEF+ EA+
Sbjct: 764 KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGFAFVEFLLPKEAE 817
>gi|320033511|gb|EFW15459.1| multiple RNA-binding domain-containing protein 1 [Coccidioides
posadasii str. Silveira]
Length = 813
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
N A++T KI+++N+PFQA + +V+ LF A+G+L+ VR+PKK + RGF F +F++
Sbjct: 686 NAARRT--KIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPKKFDRTA--RGFAFADFVSA 741
Query: 74 NEAK 77
EA+
Sbjct: 742 REAE 745
>gi|119189731|ref|XP_001245472.1| hypothetical protein CIMG_04913 [Coccidioides immitis RS]
gi|392868364|gb|EAS34142.2| multiple RNA-binding domain-containing protein 1 [Coccidioides
immitis RS]
Length = 813
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
N A++T KI+++N+PFQA + +V+ LF A+G+L+ VR+PKK + RGF F +F++
Sbjct: 686 NAARRT--KIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPKKFDRTA--RGFAFADFVSA 741
Query: 74 NEAK 77
EA+
Sbjct: 742 REAE 745
>gi|452983642|gb|EME83400.1| hypothetical protein MYCFIDRAFT_164576, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 833
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSS--NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G++A +RK+ A +K++++N+PF+A + +V L A+G+L+ VR+PKKM +
Sbjct: 691 GADAAEERRKADAEKKAASAKTKLVIKNLPFEASKKDVRALLGAYGQLRSVRVPKKMDRA 750
Query: 60 GLHRGFGFVEFITKNEAK 77
RGFGF EF T EA+
Sbjct: 751 A--RGFGFAEFTTIKEAQ 766
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP--KKMVGSGLHRGFGFVEFITKNE 75
+T ++ VRN+P+ ++ ++E F+ FG L+ V +P KK SG +GF ++++ +
Sbjct: 309 RTTMRLFVRNLPYDVQRDDLEAEFEPFGNLEEVHIPLDKK---SGSAKGFAYIQYSDPDS 365
Query: 76 AKRV 79
A+R
Sbjct: 366 AERA 369
>gi|425772895|gb|EKV11275.1| hypothetical protein PDIG_51110 [Penicillium digitatum PHI26]
gi|425782122|gb|EKV20050.1| hypothetical protein PDIP_20330 [Penicillium digitatum Pd1]
Length = 835
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + ++ LF A+G+L+ VR+P+K + RGF
Sbjct: 698 ERRREDTAKKVAARRTKIIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQKFDHTA--RGF 755
Query: 66 GFVEFITKNEAK 77
GF +F++ EA+
Sbjct: 756 GFADFVSAREAE 767
>gi|356551226|ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Glycine max]
Length = 847
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ +K+L++N+ F+A + ++ LF FG++K +RLP K G HRGF FVE++T+ EA+
Sbjct: 718 RSSTKLLIKNVAFEATEKDLRRLFSPFGQIKSLRLPMKF---GNHRGFAFVEYVTQQEAQ 774
>gi|403213912|emb|CCK68414.1| hypothetical protein KNAG_0A07610 [Kazachstania naganishii CBS
8797]
Length = 867
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 72
SN ++G KI+V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF FVEF+
Sbjct: 733 SNKNSKSG-KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKST--RGFAFVEFLL 789
Query: 73 KNEAK 77
EA+
Sbjct: 790 PKEAE 794
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFG-----ELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
I V+N+ F ++ + FK FG ++K PK+ G L GFGFVEF TK +A
Sbjct: 642 IFVKNLNFSTTSVQLTDRFKKFGGFVVAQVKTKPDPKRE-GHTLSMGFGFVEFRTKEQAN 700
Query: 78 RV 79
V
Sbjct: 701 AV 702
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
QTG ++ +RNI + + + + +LF FGEL+ V + + +G +GF ++ F +A
Sbjct: 322 QTG-RLFLRNILYNSTEQDFRDLFSPFGELEEVHIAVD-IRTGKSKGFAYILFKNPKDA 378
>gi|126275158|ref|XP_001386803.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126212672|gb|EAZ62780.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 838
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 72
S +K +KI+++N+PF+A + ++ ELF AFG+LK VR+PKK S RGF FVEF
Sbjct: 705 SKTSKSGSNKIIIKNLPFEATRKDILELFGAFGQLKSVRVPKKFDKSA--RGFAFVEFNL 762
Query: 73 KNEAK 77
EA+
Sbjct: 763 LKEAE 767
>gi|390596289|gb|EIN05691.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 779
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+K++V+N+PF+A + ++ ELF A G+LK VRLPKK RGF F++F++++EA+
Sbjct: 660 TKMIVKNVPFEATKKDIRELFGAHGQLKSVRLPKKF--DHRSRGFAFLDFVSRHEAE 714
>gi|303322875|ref|XP_003071429.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111131|gb|EER29284.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 813
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
N A++T KI+++N+PFQA + +V+ LF A+G+L+ VR+PKK + RGF F +F++
Sbjct: 686 NAARRT--KIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPKKFDRTA--RGFAFADFVSA 741
Query: 74 NEAK 77
EA+
Sbjct: 742 CEAE 745
>gi|400603073|gb|EJP70671.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 850
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G++A +RK K +K++++N+PFQA + ++ LF +G+L+ VR+PKK S
Sbjct: 705 GNDAAEERRKEDRAKKVAAKRTKVVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADSS 764
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F+T EA+
Sbjct: 765 S--RGFAFADFVTPREAE 780
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S++ VRN+P+ A + ++ E F+ FG + + LP + G +GF + F ++A
Sbjct: 321 SRLFVRNLPYSATEDDLREEFEKFGGVDEIHLP--INAQGTAKGFAMLLFTKPSDA 374
>gi|186512055|ref|NP_193696.3| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
gi|332658804|gb|AEE84204.1| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
Length = 816
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
K SN K +K+ V+NI F+A + E+ +LF FG++K +RLPKK +G + G+ FVEF
Sbjct: 693 KDSNKDKPC-TKLHVKNIAFEATKRELRQLFSPFGQIKSMRLPKKNIGQ--YAGYAFVEF 749
Query: 71 ITKNEA 76
+TK EA
Sbjct: 750 VTKQEA 755
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+I V+N+P K+ ++ + F GE+ +L + G R FGF+ F + EA++
Sbjct: 2 SRICVKNLPKHVKEDQLRDHFSQKGEITDAKLMRS--NDGKSRQFGFIGFRSAQEAQQA 58
>gi|4582489|emb|CAB40378.1| putative protein [Arabidopsis thaliana]
gi|7268757|emb|CAB78963.1| putative protein [Arabidopsis thaliana]
Length = 772
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
K SN K +K+ V+NI F+A + E+ +LF FG++K +RLPKK +G + G+ FVEF
Sbjct: 649 KDSNKDKPC-TKLHVKNIAFEATKRELRQLFSPFGQIKSMRLPKKNIGQ--YAGYAFVEF 705
Query: 71 ITKNEA 76
+TK EA
Sbjct: 706 VTKQEA 711
>gi|408388514|gb|EKJ68198.1| hypothetical protein FPSE_11665 [Fusarium pseudograminearum CS3096]
Length = 855
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ K G +KI+++N+PFQ + ++ LF +G+L+ VRLPKK
Sbjct: 710 GLDAAEERRREDKAKKSAGQRTKIIIKNLPFQTTKKDIRSLFGTYGQLRSVRLPKK--AD 767
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F+T EA+
Sbjct: 768 YTPRGFAFADFVTPREAE 785
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
S++ VRN+P+ A + ++ E F+ FG ++ V LP + SG +GF + F
Sbjct: 327 SRLFVRNLPYSATEDDLRERFEQFGTVEEVHLP--VNKSGTSKGFALILF 374
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM----VGSGLHRGFGFVEFITKNEA 76
+ + VRN+ F S + E F++ R+ KM G L GFGFVEF TK +A
Sbjct: 626 TSLFVRNLNFSTTTSRLAETFQSLDGFVSARVKTKMDPKKPGQTLSMGFGFVEFRTKGQA 685
Query: 77 K 77
+
Sbjct: 686 Q 686
>gi|71012413|ref|XP_758493.1| hypothetical protein UM02346.1 [Ustilago maydis 521]
gi|74702789|sp|Q4PC17.1|MRD1_USTMA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|46098151|gb|EAK83384.1| hypothetical protein UM02346.1 [Ustilago maydis 521]
Length = 858
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
KIL++N+PF+A + ++ +LF + G+LK VRLPKK RGFGFVE+ T EA+
Sbjct: 720 KILIKNLPFEATKRDIRDLFSSQGQLKSVRLPKKF--DNTTRGFGFVEYSTVREAQ 773
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLP--KKMVGSGLHRGFGFVEF 70
++ +RN+PF A E+ F++FG +K V +P K+ S +G FV F
Sbjct: 315 RLFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKAS---KGLAFVSF 362
>gi|385301643|gb|EIF45820.1| multiple rna-binding domain-containing protein 1 [Dekkera
bruxellensis AWRI1499]
Length = 136
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
RK ++ K T KI+V+N+PF+A + +V +LF +F LK VR+PKK S RGF FVE
Sbjct: 5 RKEKDLQKST--KIIVKNLPFEASRDDVFQLFSSFAHLKSVRVPKKFDRSA--RGFAFVE 60
Query: 70 FITKNEAKRV 79
F T EA+ V
Sbjct: 61 FNTVKEAETV 70
>gi|389743141|gb|EIM84326.1| hypothetical protein STEHIDRAFT_170049 [Stereum hirsutum FP-91666
SS1]
Length = 779
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+K+LV+N+PF+A + E+ ELF + G+LK VR+PK+ RGF F+EF+T+ EA+
Sbjct: 658 TKMLVKNVPFEATKKEIRELFGSHGQLKSVRVPKRF--DHRTRGFAFLEFVTRQEAE 712
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+++ VRN+ F + E+ ELF+ FGE+ + +P + +G +V F+ A
Sbjct: 242 ARLFVRNLAFACTEDELRELFRPFGEISQIHIPID-PKTKQPKGLAYVSFVQPTAA 296
>gi|403416240|emb|CCM02940.1| predicted protein [Fibroporia radiculosa]
Length = 805
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K +K++V+N+PF+A + +++ELF A +LK VRLP+K + RGF F+EF++ +EA
Sbjct: 681 KPKSAKMIVKNVPFEATKKDIQELFGAHAQLKSVRLPRKF--NHRTRGFAFLEFVSPHEA 738
Query: 77 KRV 79
R
Sbjct: 739 ARA 741
>gi|402217030|gb|EJT97112.1| hypothetical protein DACRYDRAFT_72431 [Dacryopinax sp. DJM-731 SS1]
Length = 766
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K++V+N+PF+A ++++ LF+ +G+LK VRLP K RGF F+EF+++ EA+ V
Sbjct: 649 AKVIVKNVPFEATKADIRSLFQGYGQLKSVRLPTKF--DRRTRGFAFLEFVSRKEAENV 705
>gi|443895118|dbj|GAC72464.1| signal peptidase complex subunit [Pseudozyma antarctica T-34]
Length = 913
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+KIL++N+PF+ + ++ +LF + G+LK VRLPKK RGFGFVE+ T EA+
Sbjct: 776 TKILIKNLPFEVTKKDIRDLFASQGQLKSVRLPKKF--DNTTRGFGFVEYTTVREAQ 830
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM 56
++ VRN+PF A ++E F++FG +K V P +
Sbjct: 321 RLFVRNLPFTATDDDIESFFESFGTVKQVSPPSSL 355
>gi|358391000|gb|EHK40405.1| hypothetical protein TRIATDRAFT_153359 [Trichoderma atroviride IMI
206040]
Length = 839
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ +VAK+ +KI+++N+PFQA + ++ LF +G+L+ VR+PKK + RGF
Sbjct: 700 ERRREDVAKKAAAQRTKIVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYTA--RGF 757
Query: 66 GFVEFITKNEAK 77
F +F+T EA+
Sbjct: 758 AFADFVTPREAE 769
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S++ VRN+P+ A + ++ + F FG L+ V LP SG+ +GF V + ++A
Sbjct: 313 SRLFVRNLPYTATEEDLHQKFGEFGTLQEVHLPTN--ASGVRKGFALVLYDDSSDA 366
>gi|449018190|dbj|BAM81592.1| probable RNA binding protein Mrd1p [Cyanidioschyzon merolae strain
10D]
Length = 815
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 78
+K++++NI F+A + E+ +LF +FG +K +RLPKK+ GSG RGF FVE+ T E R
Sbjct: 738 TKLIIKNIAFEASKRELHQLFSSFGHVKSLRLPKKVDGSG--RGFCFVEYATPQETAR 793
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
+ S A ++ S S+I +RN+ F ++E+L + FGEL+ V L + SG
Sbjct: 292 VSSRAESMASASKEWKLCRSSRIFIRNLGFNVTFEDLEKLLEPFGELEDVHLVRDR-ESG 350
Query: 61 LHRGFGFVEFITKNEAKR 78
RGFGF F T A++
Sbjct: 351 QSRGFGFARFKTVTSAQQ 368
>gi|356554642|ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-like [Glycine max]
Length = 824
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ +K+ ++N+ F+A + ++ LF FG++K +RLP K G HRGF FVE++T+ EAK
Sbjct: 695 RSSTKLHIKNVAFEATEKDLRRLFSPFGQIKSLRLPMKF---GSHRGFAFVEYVTQQEAK 751
>gi|116182074|ref|XP_001220886.1| hypothetical protein CHGG_01665 [Chaetomium globosum CBS 148.51]
gi|88185962|gb|EAQ93430.1| hypothetical protein CHGG_01665 [Chaetomium globosum CBS 148.51]
Length = 2009
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+RK ++AK+ +KI+++N+PF+A + +V LF A+G+L +RLPKK + RGF
Sbjct: 698 ERKREDLAKKAAAQRTKIVIKNLPFEASKKDVRALFSAYGKLVALRLPKKF--NHTSRGF 755
Query: 66 GFVEFITKNEA 76
F EF T EA
Sbjct: 756 AFAEFSTAKEA 766
>gi|401416828|ref|XP_003872908.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489134|emb|CBZ24386.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 819
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 76
K++V+N+PF+A + +V ELF AF E++ VR+P+K HRGF FVEF+++ EA
Sbjct: 734 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHAFSSHRENNHRGFAFVEFLSEAEA 793
Query: 77 KR 78
R
Sbjct: 794 AR 795
>gi|170110064|ref|XP_001886238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638822|gb|EDR03097.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 496
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
T +K++V+N+PF+A + ++ +LF A G LK VRLPKK RGF F++F+++ EA+
Sbjct: 373 TTTKMIVKNVPFEATKKDIRDLFGAHGHLKSVRLPKKF--DARTRGFAFLDFVSRREAE 429
>gi|448521115|ref|XP_003868429.1| hypothetical protein CORT_0C01480 [Candida orthopsilosis Co 90-125]
gi|380352769|emb|CCG25525.1| hypothetical protein CORT_0C01480 [Candida orthopsilosis]
Length = 819
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
SKI+++N+PF+A + ++ ELF AFG+LK VR+PKK S RGF FVEF EA+
Sbjct: 696 SKIIIKNLPFEASRKDLLELFGAFGQLKSVRVPKKFDQSA--RGFAFVEFNLLKEAE 750
>gi|346321688|gb|EGX91287.1| pre-rRNA processing protein Mrd1, putative [Cordyceps militaris
CM01]
Length = 849
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAK--QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G++A +RK K T +KI+++N+PFQ + ++ LF +G+L+ VR+PKK
Sbjct: 705 GNDAAEERRKQDKAKKVAATRTKIVIKNLPFQVSKQDIRTLFGTYGQLRSVRVPKK--AD 762
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F+T EA+
Sbjct: 763 YTSRGFAFADFVTPREAE 780
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S++ VRN+P+ A + ++ E F+ FG + V LP + G +GF + F ++A
Sbjct: 322 SRLFVRNLPYSATEDDLREEFEKFGGVDEVHLP--INAQGTSKGFAMMLFTKASDA 375
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRL-----PKKMVGSGLHRGFGFVEFITKNE 75
+ + +RN+ F S + E+FKA R+ PKK G L GFGF EF TK +
Sbjct: 621 TSLFIRNLNFATTTSRLAEVFKALDGFVSARVKTKTDPKK-PGQVLSMGFGFAEFRTKAQ 679
Query: 76 A 76
A
Sbjct: 680 A 680
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
++K+ +V T K+LV+N+PF+ +EV ELF+ +G L+ VR+PKK+ G +G+ F+
Sbjct: 594 RKKAEDVTAST--KLLVKNLPFETNLNEVRELFRVYGTLRGVRVPKKI--DGQLKGYAFI 649
Query: 69 EFITKNE 75
E+ TK E
Sbjct: 650 EYATKQE 656
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ILV N+P+ + +V E F+ FGE+ V LP V SG +GF FV ++ +A
Sbjct: 214 RILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKV-SGKTKGFAFVMYVVPQDA 267
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K+ + I+V+NI A Q E++ +F+ G+LK +PK + EFI N+A
Sbjct: 393 KRGNTAIIVKNIAANADQGEIKTMFENCGKLKRFLMPK-------SKALAIAEFIQPNDA 445
Query: 77 K 77
K
Sbjct: 446 K 446
>gi|169855509|ref|XP_001834421.1| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
gi|116504503|gb|EAU87398.1| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
Length = 807
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 4/68 (5%)
Query: 12 SSNVA--KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+SN A K +K++V+N+PF+A + ++ +LF A G+LK VRLP+K RGF F+E
Sbjct: 663 TSNDATGKSRTTKMIVKNVPFEATKKDIRDLFGAHGKLKSVRLPRKF--DSRTRGFAFLE 720
Query: 70 FITKNEAK 77
F++++EA+
Sbjct: 721 FVSRHEAE 728
>gi|340055425|emb|CCC49744.1| putative RNA-binding protein, fragment, partial [Trypanosoma vivax
Y486]
Length = 853
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 76
K++V+N+PF+A + ++ +LF A E+ VRLP+K HRGF FVEF+T+ EA
Sbjct: 768 KLVVKNVPFEATERDIRDLFSAVSEVHGVRLPRKNHQFSSHRQNNHRGFAFVEFLTEQEA 827
Query: 77 KRV 79
+R
Sbjct: 828 RRA 830
>gi|307111065|gb|EFN59300.1| hypothetical protein CHLNCDRAFT_7238, partial [Chlorella
variabilis]
Length = 556
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 9 KRKSSNVAKQTGS-------KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
KRK+ G+ K++VRN+ F+A + ++ LF FG + RLP+K G
Sbjct: 449 KRKADGTGSTGGAAVLPDTCKVVVRNVAFEATRKDIMGLFTPFGHVNSCRLPRKF--DGT 506
Query: 62 HRGFGFVEFITKNEAK 77
HRGF FV+F TK EA+
Sbjct: 507 HRGFAFVDFATKQEAR 522
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A T + +++A TG ++ VRN+P+ A ++E++ LF+ +G++ V L S +G
Sbjct: 4 AVTEAEEEAHIA-DTG-RLFVRNLPYSATEAELQALFEGYGDVSEVHLVLDRA-SKKSKG 60
Query: 65 FGFVEFITKNEA 76
F V+F +A
Sbjct: 61 FALVQFADPQDA 72
>gi|326478692|gb|EGE02702.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 1545
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R++ + A + G +I V NIP++ + ++ ELF A+G+++ VR+P K+ +G RGFGFV
Sbjct: 956 QRQARSGAYEEGREIYVCNIPYKTTEGDLVELFTAYGDVESVRIPTKV--NGETRGFGFV 1013
Query: 69 EFITKNEA 76
F TK+++
Sbjct: 1014 TFATKDQS 1021
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
T + I V N P A ++ + ELF ++GE+ VR P + HR F +V+F + + A
Sbjct: 875 TDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPSLKFNT--HRRFCYVQFTSSSSA 930
>gi|258565855|ref|XP_002583672.1| multiple RNA-binding domain-containing protein 1 [Uncinocarpus
reesii 1704]
gi|237907373|gb|EEP81774.1| multiple RNA-binding domain-containing protein 1 [Uncinocarpus
reesii 1704]
Length = 772
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ K +KI+++N+PFQA + +++ LF A+G+L+ +R+PKK +
Sbjct: 675 GMDAAEQQRREDTAKKNAARRTKIIIKNLPFQATKKDIQSLFGAYGQLRSLRVPKKFDRT 734
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F++ EA+
Sbjct: 735 A--RGFAFADFVSAREAE 750
>gi|440474273|gb|ELQ43025.1| multiple RNA-binding domain-containing protein 1 [Magnaporthe
oryzae Y34]
gi|440485469|gb|ELQ65427.1| multiple RNA-binding domain-containing protein 1 [Magnaporthe
oryzae P131]
Length = 831
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ KQ G +KI+V+N+PF+A + +V LF +G+L+ VR+PK
Sbjct: 686 GLDAAEERRREDKAKKQAGQRTKIVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNF--E 743
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F EF T EA+
Sbjct: 744 NRTRGFAFAEFTTPKEAE 761
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEF 70
S++ VRN+P+ A + +++ +F AFG L + L G G +G F+++
Sbjct: 312 SRLFVRNLPYSATEDDLKSVFGAFGPLDEIHL--SHAGREGTSKGIAFIQY 360
>gi|444317805|ref|XP_004179560.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
gi|387512601|emb|CCH60041.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
Length = 868
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
I+V+N+PF+A + ++ ELF +FG+LK VR+PKK S RGF FVEF+ EA+
Sbjct: 743 IIVKNLPFEATRKDIFELFSSFGQLKSVRVPKKFDKSA--RGFAFVEFLLPKEAE 795
>gi|389632927|ref|XP_003714116.1| multiple RNA-binding domain-containing protein 1, partial
[Magnaporthe oryzae 70-15]
gi|351646449|gb|EHA54309.1| multiple RNA-binding domain-containing protein 1, partial
[Magnaporthe oryzae 70-15]
Length = 867
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ KQ G +KI+V+N+PF+A + +V LF +G+L+ VR+PK
Sbjct: 722 GLDAAEERRREDKAKKQAGQRTKIVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNF--E 779
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F EF T EA+
Sbjct: 780 NRTRGFAFAEFTTPKEAE 797
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEF 70
S++ VRN+P+ A + +++ +F AFG L + L G G +G F+++
Sbjct: 348 SRLFVRNLPYSATEDDLKSVFGAFGPLDEIHL--SHAGREGTSKGIAFIQY 396
>gi|254574096|ref|XP_002494157.1| Essential conserved protein that is part of the 90S preribosome
[Komagataella pastoris GS115]
gi|238033956|emb|CAY71978.1| Essential conserved protein that is part of the 90S preribosome
[Komagataella pastoris GS115]
Length = 810
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
SKI+++N+PF+A + ++ ELF +FG LK R+PKK S RGF FVEF EA++
Sbjct: 686 SKIIIKNLPFEATRKDIVELFSSFGHLKSARVPKKFDSSA--RGFAFVEFSLLKEAEQA 742
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 15 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
+ QTG ++ VRNI + A ++E +LF +GEL V + +G +GF +V+F
Sbjct: 280 IISQTG-RLFVRNISYTATEAEFRQLFSTYGELDEVHVAID-TRTGASKGFVYVKFQDPE 337
Query: 75 EA 76
+A
Sbjct: 338 QA 339
>gi|322712046|gb|EFZ03619.1| MRD1-like protein [Metarhizium anisopliae ARSEF 23]
Length = 841
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ K +KI+++N+PFQA + +V LF +G+L+ VR+PKK +
Sbjct: 696 GQDAAEERRREDRAKKAAAQRTKIVIKNLPFQATKKDVRSLFGTYGQLRSVRVPKKADFT 755
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F+T EA+
Sbjct: 756 A--RGFAFADFVTPREAE 771
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S++ VRN+P+ A + ++ E F FG L+ V LP + +G +GF V F ++A R
Sbjct: 315 SRLFVRNLPYSATEDDIRETFDKFGTLQEVHLP--LTAAGATKGFAMVLFTNSSDAVRA 371
>gi|328354024|emb|CCA40421.1| Multiple RNA-binding domain-containing protein 1 [Komagataella
pastoris CBS 7435]
Length = 834
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
SKI+++N+PF+A + ++ ELF +FG LK R+PKK S RGF FVEF EA++
Sbjct: 710 SKIIIKNLPFEATRKDIVELFSSFGHLKSARVPKKFDSSA--RGFAFVEFSLLKEAEQA 766
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 15 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
+ QTG ++ VRNI + A ++E +LF +GEL V + +G +GF +V+F
Sbjct: 304 IISQTG-RLFVRNISYTATEAEFRQLFSTYGELDEVHVAID-TRTGASKGFVYVKFQDPE 361
Query: 75 EA 76
+A
Sbjct: 362 QA 363
>gi|398011431|ref|XP_003858911.1| hypothetical protein, conserved [Leishmania donovani]
gi|322497122|emb|CBZ32193.1| hypothetical protein, conserved [Leishmania donovani]
Length = 952
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 76
K++V+N+PF+A + +V ELF AF E++ VR+P+K HRGF FVEF+++ EA
Sbjct: 867 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSSHRENNHRGFAFVEFLSEAEA 926
Query: 77 KR 78
R
Sbjct: 927 AR 928
>gi|367018676|ref|XP_003658623.1| hypothetical protein MYCTH_2294614 [Myceliophthora thermophila ATCC
42464]
gi|347005890|gb|AEO53378.1| hypothetical protein MYCTH_2294614 [Myceliophthora thermophila ATCC
42464]
Length = 831
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ ++AK+ +KI+++N+PF+A + +V LF A+G+L +RLPKK + + RGF
Sbjct: 693 ERRREDLAKKAAAQRTKIVIKNLPFEATKKDVRALFSAYGKLVALRLPKKF--NSMSRGF 750
Query: 66 GFVEFITKNEA 76
F EF T EA
Sbjct: 751 AFAEFATAKEA 761
>gi|322695955|gb|EFY87755.1| putative MRD1 [Metarhizium acridum CQMa 102]
gi|326633449|gb|ADZ99447.1| pre-rRNA processing protein [Metarhizium anisopliae]
gi|326633451|gb|ADZ99448.1| pre-rRNA processing protein [Metarhizium anisopliae]
Length = 841
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ K +KI+++N+PFQA + +V LF +G+L+ VR+PKK +
Sbjct: 696 GQDAAEERRREDRAKKAAAQRTKIVIKNLPFQATKKDVRSLFGTYGQLRSVRVPKKADFT 755
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F +F+T EA+
Sbjct: 756 A--RGFAFADFVTAREAE 771
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S++ VRN+P+ A + ++ E F FG L+ V LP + S +GF V F ++A R
Sbjct: 315 SRLFVRNLPYSATEDDIWETFDKFGTLQEVHLP--LTASRATKGFAMVLFTDSSDAVRA 371
>gi|146079207|ref|XP_001463723.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134067810|emb|CAM66090.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 954
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 76
K++V+N+PF+A + +V ELF AF E++ VR+P+K HRGF FVEF+++ EA
Sbjct: 869 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSSHRENNHRGFAFVEFLSEAEA 928
Query: 77 KR 78
R
Sbjct: 929 AR 930
>gi|157865391|ref|XP_001681403.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68124699|emb|CAJ02743.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 950
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 76
K++V+N+PF+A + +V ELF AF E++ VR+P+K HRGF FVEF+++ EA
Sbjct: 865 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSSHRENNHRGFAFVEFLSEAEA 924
Query: 77 KR 78
R
Sbjct: 925 AR 926
>gi|326470511|gb|EGD94520.1| pre-mRNA splicing factor (Prp24) [Trichophyton tonsurans CBS 112818]
Length = 1279
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R++ + A + G +I V NIP++ + ++ ELF A+G+++ VR+P K+ +G RGFGFV
Sbjct: 950 QRQARSGAYEEGREIYVCNIPYKTTEGDLVELFTAYGDVESVRIPTKV--NGETRGFGFV 1007
Query: 69 EFITKNEA 76
F TK+++
Sbjct: 1008 TFATKDQS 1015
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
T + I V N P A ++ + ELF ++GE+ VR P + HR F +V+F + + A
Sbjct: 869 TDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPSLKFNT--HRRFCYVQFTSSSSA 924
>gi|346973867|gb|EGY17319.1| multiple RNA-binding domain-containing protein [Verticillium
dahliae VdLs.17]
Length = 866
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ G +KI+V+N+PF+ + E+ LF +G L+ VRLPKKM S
Sbjct: 720 GQDAAEERRREDKAKMMAGQRTKIVVKNLPFEISKKELRALFATYGTLRAVRLPKKMGQS 779
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F EF T EA+
Sbjct: 780 T--RGFAFAEFSTPKEAQ 795
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
+ A + K + N +QT +++ RN+ F + ++ + F+ +GE++ V +P + SG
Sbjct: 322 AAPAPSDKEVAINTIRQT-ARLFARNLAFSVSEDDLRDHFEQYGEVEEVHIP--VAKSGT 378
Query: 62 HRGFGFVEFITKNEA 76
+GF +V F + + A
Sbjct: 379 SKGFAYVSFASADAA 393
>gi|340517170|gb|EGR47415.1| predicted protein [Trichoderma reesei QM6a]
Length = 797
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + ++ LF +G+L+ VR+PKK + RGF
Sbjct: 658 ERRREDAAKKAAAQRTKIVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYTA--RGF 715
Query: 66 GFVEFITKNEAK 77
F +F+T EA+
Sbjct: 716 AFADFVTPREAE 727
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S++ VRN+P+ + ++ E F FG ++ V LP G+G +GF V F ++A
Sbjct: 311 SRLFVRNLPYTTTEEDLYEAFGKFGTIQEVHLPTNASGAG--KGFALVLFDNPSDA 364
>gi|327306541|ref|XP_003237962.1| pre-mRNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326460960|gb|EGD86413.1| pre-mRNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 1302
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R++ + A + G +I V NIP++ + ++ ELF A+G+++ VR+P K+ +G RGFGFV
Sbjct: 973 QRQARSGAYEEGREIYVCNIPYKTTEGDLVELFTAYGDVESVRIPTKV--NGDTRGFGFV 1030
Query: 69 EFITKNEA 76
F TK+++
Sbjct: 1031 TFATKDQS 1038
>gi|354545488|emb|CCE42216.1| hypothetical protein CPAR2_807650 [Candida parapsilosis]
Length = 819
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 7/66 (10%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
++T KSS SKI+++N+PF+ + ++ ELF AFG+LK VR+PKK S RG
Sbjct: 685 SSTAPSKSSKT-----SKIIIKNLPFETSRKDILELFGAFGQLKSVRVPKKFDQSA--RG 737
Query: 65 FGFVEF 70
F FVEF
Sbjct: 738 FAFVEF 743
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
+E + + K+ + ++TG ++ +RNI ++A + + + LF+ +G L+ V + +G
Sbjct: 277 AEHKSEEEKAKDKIEETG-RLFIRNISYEATEDDFKHLFEKYGPLEEVHIAVD-TRTGKS 334
Query: 63 RGFGFVEFITKNEA 76
+GF +++F+ +A
Sbjct: 335 KGFVYIQFVNTEDA 348
>gi|367015674|ref|XP_003682336.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
gi|359749998|emb|CCE93125.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
Length = 855
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
I+V+N+PF+A + ++ ELF +FG LK VR+PKK S RGF FVEF+ EA+
Sbjct: 730 IIVKNLPFEATRKDIFELFSSFGHLKSVRVPKKFDKSA--RGFAFVEFLLPKEAE 782
>gi|358387674|gb|EHK25268.1| hypothetical protein TRIVIDRAFT_72404 [Trichoderma virens Gv29-8]
Length = 841
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ + AK+ +KI+++N+PFQA + ++ LF +G+L+ VR+PKK + RGF
Sbjct: 702 ERRREDAAKKAAAQRTKIVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYTA--RGF 759
Query: 66 GFVEFITKNEAK 77
F +F+T EA+
Sbjct: 760 AFADFVTPREAE 771
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
S++ VRN+P+ + ++ F FG L+ V LP SG+ +GF V F
Sbjct: 316 SRLFVRNLPYTTTEEDLHHEFGKFGTLQEVHLPTN--ASGVRKGFAMVLF 363
>gi|323449244|gb|EGB05134.1| hypothetical protein AURANDRAFT_1296 [Aureococcus anophagefferens]
Length = 464
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
++ + K + +K++VRN+ F ++V++LF+AFG LK VRLPK+ G HRGF FVEF
Sbjct: 372 RAPDAKKTSKTKLVVRNLAFAVVVNDVKQLFEAFGALKKVRLPKRF--DGRHRGFAFVEF 429
Query: 71 ITKNEA 76
+A
Sbjct: 430 TNPRDA 435
>gi|392563575|gb|EIW56754.1| hypothetical protein TRAVEDRAFT_127405 [Trametes versicolor
FP-101664 SS1]
Length = 784
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K +K++V+N+PF+A + ++ ELF A +LK VR+P+K RGF F+EF T++EA
Sbjct: 660 KARTTKMIVKNVPFEATKKDIRELFGAHAQLKSVRVPRKF--DHRTRGFAFLEFTTRHEA 717
Query: 77 KR 78
+R
Sbjct: 718 ER 719
>gi|209882532|ref|XP_002142702.1| multiple RNA-binding domain-containing protein 1 [Cryptosporidium
muris RN66]
gi|209558308|gb|EEA08353.1| multiple RNA-binding domain-containing protein 1, putative
[Cryptosporidium muris RN66]
Length = 809
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 5/66 (7%)
Query: 14 NVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
N+ K+T +K+L++N+PFQA +++V+ LF A G + VR+PKK G +RG+ FVEF
Sbjct: 699 NIIKKTSKISNKLLIKNLPFQASKNDVKNLFGAIGSVVSVRIPKKY--DGTNRGYCFVEF 756
Query: 71 ITKNEA 76
+ K EA
Sbjct: 757 LGKLEA 762
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
++ K N + +++V N P+ + ++ E F +GE+K + K +G+ +G GF
Sbjct: 282 IENKIDNGDSLSSGRLMVLNFPYSTSEEDLIEYFSTWGEVKSTHIVKSE-RTGISKGCGF 340
Query: 68 VEFITKNEAKR 78
V+F A R
Sbjct: 341 VQFAFPEHAVR 351
>gi|389600475|ref|XP_001562851.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504386|emb|CAM37284.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 943
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-----SGLHRGFGFVEFITKNEA 76
K++V+N+PF+A + +V ELF AF E++ VR+P+K HRGF FVEF+++ EA
Sbjct: 858 KLIVKNLPFEATERDVRELFSAFSEIRSVRVPRKSHTFSSHRENNHRGFAFVEFLSEVEA 917
Query: 77 KR 78
R
Sbjct: 918 AR 919
>gi|221483682|gb|EEE21994.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 997
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+K+LVRN+ FQA S++ LF A+G + V +P++ G RGFGFV+F TK EA+
Sbjct: 911 NKVLVRNLAFQASASDLRGLFSAYGNVTRVCIPRQH--EGRSRGFGFVDFATKQEAQ 965
>gi|393219661|gb|EJD05148.1| hypothetical protein FOMMEDRAFT_18782 [Fomitiporia mediterranea
MF3/22]
Length = 828
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
++V+N+PF+A +S++ LF G LK VRLPKK + RG+ F+EF T+ EA+RV
Sbjct: 712 MIVKNLPFEATKSDLRSLFNTHGTLKSVRLPKKF--NSHSRGYAFLEFTTRLEAERV 766
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
AK++ + ILV+NIP+ ++ ELF+ GEL+ V +P SG VEF ++
Sbjct: 477 AKRSDTVILVKNIPYGTTSQQIRELFEPHGELRRVVVPP----SGT---IAVVEFAHPDD 529
Query: 76 AKR 78
A R
Sbjct: 530 AGR 532
>gi|237841019|ref|XP_002369807.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|211967471|gb|EEB02667.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
Length = 997
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+K+LVRN+ FQA S++ LF A+G + V +P++ G RGFGFV+F TK EA+
Sbjct: 911 NKVLVRNLAFQASASDLRGLFSAYGNVTRVCIPRQH--EGRSRGFGFVDFATKQEAQ 965
>gi|380490988|emb|CCF35636.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 856
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ K G +KI+++N+PF+ + ++ LF +G+L+ VRLPKK
Sbjct: 710 GQDAAEERRREDKARKAAGQRTKIVIKNLPFEVTKKDIRTLFGTYGQLRAVRLPKKF--G 767
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F EF+ EA+
Sbjct: 768 NTTRGFAFAEFVAPREAE 785
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S++ VRN+PF A + ++ F+ +GEL+ V LP + G +GF V+F A
Sbjct: 328 SRLFVRNLPFSANEEDLRAHFEHYGELQEVHLP--VTVGGASKGFAMVQFTNAESA 381
>gi|353238423|emb|CCA70370.1| probable RNA-binding protein [Piriformospora indica DSM 11827]
Length = 799
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
+K G+K++V+N+ F+ + E+ ELF A G++K VRLP + RGF FV+F T+NE
Sbjct: 676 SKSKGTKLIVKNLAFEVSKKELWELFSAHGQVKSVRLPNR--ADRRSRGFAFVDFATRNE 733
Query: 76 AK 77
A+
Sbjct: 734 AE 735
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLP 53
ILV+NIP+ SE+ E+F AFG LK V +P
Sbjct: 464 ILVKNIPYGTSSSELHEMFSAFGSLKQVLMP 494
>gi|389586278|dbj|GAB69007.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1121
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K+LV+N+ FQ + E+ +LF AFG +K VR+PK RG+ FVEF++KNE
Sbjct: 981 KLLVKNLAFQVTKEELRKLFSAFGNIKSVRIPKNAYNRS--RGYAFVEFMSKNEC 1033
>gi|294944087|ref|XP_002784080.1| RNA-binding domain protein, putative [Perkinsus marinus ATCC 50983]
gi|239897114|gb|EER15876.1| RNA-binding domain protein, putative [Perkinsus marinus ATCC 50983]
Length = 849
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+++ VRN+ F+A + ++ +LF +G + VR+P K+ SG HRGF FVEF++++EA
Sbjct: 733 NRLCVRNVAFEASRRDIRKLFSTYGNVVAVRMPLKVDRSG-HRGFAFVEFVSRSEA 787
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++V+N+P + ++E F A GE+ R+ K G R FGFV F + EAK+
Sbjct: 9 SRVIVKNLPKHVDNARLKEFFAAHGEVTDARVIK--TKDGRSRCFGFVGFRSPAEAKKA 65
>gi|38567159|emb|CAE76453.1| related to MRD1 [Neurospora crassa]
Length = 790
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 9 KRKSSNVAKQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ ++AK+ G+K++V+N+PF+ + EV LF A+G+L +R+PKK S RGF
Sbjct: 652 ERRREDMAKKAANQGTKLVVKNLPFEVTKKEVRTLFSAYGKLVALRIPKKFNQSS--RGF 709
Query: 66 GFVEFITKNEA 76
F EF T EA
Sbjct: 710 AFAEFSTAKEA 720
>gi|393239414|gb|EJD46946.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 769
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
G E + + + +K++V+N+PF+A + ++ LF A G LK VRLPKK +
Sbjct: 628 GREDEAQDSRDGAIGGKKSAKMIVKNVPFEATRKDLRALFGAHGHLKSVRLPKKF--NSR 685
Query: 62 HRGFGFVEFITKNEAKRV 79
RGF F+EF++ EA+
Sbjct: 686 SRGFAFLEFVSHQEAEHA 703
>gi|85116206|ref|XP_965014.1| hypothetical protein NCU02611 [Neurospora crassa OR74A]
gi|74696746|sp|Q7SG09.1|MRD1_NEUCR RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|28926814|gb|EAA35778.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 827
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 9 KRKSSNVAKQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ ++AK+ G+K++V+N+PF+ + EV LF A+G+L +R+PKK S RGF
Sbjct: 689 ERRREDMAKKAANQGTKLVVKNLPFEVTKKEVRTLFSAYGKLVALRIPKKFNQSS--RGF 746
Query: 66 GFVEFITKNEA 76
F EF T EA
Sbjct: 747 AFAEFSTAKEA 757
>gi|294656916|ref|XP_002770331.1| DEHA2D17358p [Debaryomyces hansenii CBS767]
gi|199431836|emb|CAR65685.1| DEHA2D17358p [Debaryomyces hansenii CBS767]
Length = 842
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
I+++N+PF+A + +V ELF AFG+LK VR+PKK S RGF FVEF EA+
Sbjct: 716 IIIKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSA--RGFAFVEFSLLKEAE 768
>gi|388854650|emb|CCF51807.1| probable RNA-binding protein [Ustilago hordei]
Length = 874
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+KILV+N+PF+A + ++ +LF + G +K VRLPKK S RGF FVE+ T EA+
Sbjct: 737 TKILVKNLPFEATKKDIRDLFSSQGLVKSVRLPKKFDNS--TRGFAFVEYTTVREAQ 791
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLP--KKMVGSGLHRGFGFVEFITKNEA 76
++ VRN+PF A + EV+ F++FG +K V +P K+ S +G F+ F A
Sbjct: 330 RLFVRNLPFAASEDEVQSFFESFGSVKQVHIPLDKQTKAS---KGLAFISFTDPAHA 383
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 26/37 (70%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP 53
+++ + +LV+NIP+ EV++LF+ FGE+ V +P
Sbjct: 513 ERSNTTMLVKNIPYGTSVEEVQKLFEEFGEVDKVLIP 549
>gi|302307467|ref|NP_984131.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|442570228|sp|Q75A83.2|MRD1_ASHGO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|299789015|gb|AAS51955.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|374107347|gb|AEY96255.1| FADR035Cp [Ashbya gossypii FDAG1]
Length = 838
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 25 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
V+N+PF+A + +V ELF +FG+LK VR+PKK S RGF FVEF+ +EA+
Sbjct: 716 VKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSA--RGFAFVEFLLPSEAE 766
>gi|66475966|ref|XP_627799.1| 5x RRM. Mrd1p like, splicing related [Cryptosporidium parvum Iowa
II]
gi|32399047|emb|CAD98287.1| RNA-binding domain protein [Cryptosporidium parvum]
gi|46229208|gb|EAK90057.1| 5x RRM. Mrd1p like, splicing related [Cryptosporidium parvum Iowa
II]
Length = 806
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K +K+L++N+PFQA +S++ LF + G + +R+PKK G ++G+ F+EF+ K EA
Sbjct: 711 KNVSNKLLIKNLPFQATKSDIMSLFNSVGTVTSIRIPKK--SDGTNKGYCFIEFLGKLEA 768
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 7/53 (13%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELK---FVRLPKKMVGSGLHRGFGFVEF 70
S+++V NI + + ++ + F +GE+K +R P+ SG+ +G+GFV++
Sbjct: 287 SRLMVVNISYSTTEEDLNKFFSKWGEVKSVNIIRSPE----SGVSKGYGFVQY 335
>gi|302496478|ref|XP_003010240.1| pre-mRNA splicing factor (Prp24), putative [Arthroderma benhamiae CBS
112371]
gi|291173782|gb|EFE29600.1| pre-mRNA splicing factor (Prp24), putative [Arthroderma benhamiae CBS
112371]
Length = 1598
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R++ + A + G +I V NIP++ + ++ ELF A+G+++ VR+P K+ +G RGFGFV
Sbjct: 1258 QRQARSGAYEEGREIYVCNIPYKTTEGDLVELFTAYGDVESVRIPTKV--NGETRGFGFV 1315
Query: 69 EFITK 73
F TK
Sbjct: 1316 TFATK 1320
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
T + I V N P A ++ + ELF ++GE+ VR P + HR F +V+F + + A
Sbjct: 1177 TDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPSLKFNT--HRRFCYVQFTSSSSA 1232
>gi|67623683|ref|XP_668124.1| RNA-binding domain protein [Cryptosporidium hominis TU502]
gi|54659302|gb|EAL37885.1| RNA-binding domain protein [Cryptosporidium hominis]
Length = 800
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K +K+L++N+PFQA +S++ LF + G + +R+PKK G ++G+ F+EF+ K EA
Sbjct: 705 KNVSNKLLIKNLPFQATKSDIMSLFNSVGTVTSIRIPKK--SDGTNKGYCFIEFLGKLEA 762
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 7/53 (13%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELK---FVRLPKKMVGSGLHRGFGFVEF 70
S+++V NI + + ++ + F +GE+K +R P+ SG+ +G+GFV++
Sbjct: 281 SRLMVVNISYSTTEEDLNKFFSKWGEVKSVNIIRSPE----SGVSKGYGFVQY 329
>gi|345308678|ref|XP_001519607.2| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Ornithorhynchus anatinus]
Length = 454
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 72
SN+ K + KI+V+N+ FQA + ++++LF +G +K +RLPK + HRGF FVEF++
Sbjct: 362 SNLEKPS-PKIIVKNLAFQATKRDLQKLFGFYGNVKSIRLPKTIKNQ--HRGFAFVEFMS 418
Query: 73 KNEA 76
K EA
Sbjct: 419 KKEA 422
>gi|388582417|gb|EIM22722.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 725
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+K+LV+N+PF+A + ++ ELF G+LK VRLP+K RGF F++F+T+ +A+
Sbjct: 607 TKMLVKNVPFEASKKDIRELFGMHGQLKSVRLPRKF--DRKTRGFAFLDFVTRRDAE 661
>gi|302655824|ref|XP_003019695.1| pre-mRNA splicing factor (Prp24), putative [Trichophyton verrucosum
HKI 0517]
gi|291183434|gb|EFE39050.1| pre-mRNA splicing factor (Prp24), putative [Trichophyton verrucosum
HKI 0517]
Length = 1402
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R++ + A + G +I V NIP++ + ++ ELF A+G+++ VR+P K+ +G RGFGFV
Sbjct: 1062 QRQARSGAYEEGREIYVCNIPYKTTEGDLVELFTAYGDVESVRIPTKV--NGETRGFGFV 1119
Query: 69 EFITK 73
F TK
Sbjct: 1120 TFATK 1124
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
T + I V N P A ++ + ELF ++GE+ VR P + HR F +V+F + + A
Sbjct: 981 TDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPSLKFNT--HRRFCYVQFTSSSSA 1036
>gi|149241847|ref|XP_001526367.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450490|gb|EDK44746.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 868
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
S AT V ++ K +KI+++N+PF+A + ++ ELF AFG LK VR+PKK S
Sbjct: 728 SRATAVGSAAAKSGK--SNKIIIKNLPFEATRKDLLELFGAFGSLKSVRVPKKFDQSA-- 783
Query: 63 RGFGFVEFITKNEAK 77
RGF F+EF EA+
Sbjct: 784 RGFAFIEFNLLKEAE 798
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
Q ++ +RNI ++A + + ELF +G L+ V + S +GF +++F+ +A
Sbjct: 310 QDTGRLFIRNILYEATEDDFRELFLPYGALEEVHIAIDTRTSK-SKGFVYIQFVNPQDAV 368
Query: 78 RV 79
R
Sbjct: 369 RA 370
>gi|297804178|ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315809|gb|EFH46232.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 788
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 10 RKSSNVAKQTG-----SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
++S K +G +K+ V+N+ F+A + E+++LF FG++K +RLPK+ + + G
Sbjct: 657 KRSDKAGKDSGKDKPSTKLHVKNVAFEATKKELKQLFSPFGQIKSMRLPKRNIEQ--YAG 714
Query: 65 FGFVEFITKNEA 76
F FVEF+TK EA
Sbjct: 715 FAFVEFVTKQEA 726
>gi|402083842|gb|EJT78860.1| multiple RNA-binding domain-containing protein 1 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 842
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGS 59
G +A +R+ K G +KI+++N+PF+A +++V LF +G+L+ VR+PK
Sbjct: 691 GLDAAEERRREDKAKKLAGQHTKIIIKNLPFEATRADVRALFGTYGQLRAVRVPKNFENK 750
Query: 60 GLHRGFGFVEFITKNEAK 77
RGF F EF T EA+
Sbjct: 751 T--RGFAFAEFTTPKEAE 766
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S++ VRN+P+ A + ++ F+ FG ++ V LP + S +G+ V F + + A
Sbjct: 310 SRLFVRNLPYSATEDDLRSHFEKFGSVEEVHLP--VAKSSASKGYALVLFTSASSA 363
>gi|395326326|gb|EJF58737.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 831
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K++V+N+PF+ + ++ ELF A +LK VRLP+K RGF F+EF T++EA++
Sbjct: 676 TKMIVKNVPFEVTKKDIRELFGAHAQLKSVRLPRKF--DHRTRGFAFLEFTTRHEAEQA 732
>gi|399216364|emb|CCF73052.1| unnamed protein product [Babesia microti strain RI]
Length = 717
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ +K+ ++N+ FQA +SEV +LF +G ++ VR+PK M S +RGF FVEF +K++A
Sbjct: 613 KVSNKLSIKNLAFQATKSEVRKLFSLYGNVRTVRIPKSMSNS--NRGFAFVEFESKSDA 669
>gi|367052423|ref|XP_003656590.1| hypothetical protein THITE_135180 [Thielavia terrestris NRRL 8126]
gi|347003855|gb|AEO70254.1| hypothetical protein THITE_135180 [Thielavia terrestris NRRL 8126]
Length = 2006
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ ++AK+ +KI+++N+PF+A + +V LF +G+L +RLPKK + RGF
Sbjct: 715 ERRREDLAKKAAAQRTKIVIKNLPFEASKKDVRNLFSEYGKLVALRLPKKF--NHTSRGF 772
Query: 66 GFVEFITKNEA 76
F EF T EA
Sbjct: 773 AFAEFATPREA 783
>gi|315047680|ref|XP_003173215.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma gypseum CBS
118893]
gi|311343601|gb|EFR02804.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma gypseum CBS
118893]
Length = 1329
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R++ + A + G +I V NIP++ + ++ ELF A+G+++ VR+P K+ +G RGF FV
Sbjct: 1000 QRQARSGAYEEGREIYVCNIPYKTTEGDLVELFTAYGDVESVRIPTKV--NGETRGFAFV 1057
Query: 69 EFITKNEA 76
F TK+++
Sbjct: 1058 SFATKDQS 1065
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
T + I V N P A ++ + ELF ++GE+ VR P + HR F +V+F + + A
Sbjct: 919 TDTTIFVTNFPPTADENYIRELFHSYGEIAEVRFPS--LKYNTHRRFCYVQFTSSSSA 974
>gi|124805915|ref|XP_001350574.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23496698|gb|AAN36254.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 1119
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
KQ K++V+N+ FQ + E+ +LF AFG +K VR+PK + RG+ F+EF++K E+
Sbjct: 979 KQVTKKLVVKNLAFQVNKEELRKLFSAFGNVKSVRIPKNVYNRS--RGYAFIEFMSKKES 1036
>gi|358340327|dbj|GAA48246.1| multiple RNA-binding domain-containing protein 1, partial
[Clonorchis sinensis]
Length = 518
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
+E + K + T +L RN+ FQA Q E+ ELF G L VRLP+K SG H
Sbjct: 375 TEQEKKRNKDKKPPEPTKPVLLCRNVSFQATQKELTELFSPVGGLIRVRLPQK--PSGGH 432
Query: 63 RGFGFVEFITKNEAK 77
RGF F+EF T ++AK
Sbjct: 433 RGFAFLEFATIDQAK 447
>gi|260948938|ref|XP_002618766.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
gi|238848638|gb|EEQ38102.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
Length = 633
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+KI+++N+PF+A + +V ELF A+G +K VR+PKK S RGF FVE+ EA+
Sbjct: 506 SNKIIIKNLPFEATRKDVLELFGAYGSVKSVRVPKKFDKSA--RGFAFVEYTMLKEAE 561
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
QTG ++ VRNI + +K+ + ELF +G LK V + +G +G+ +V+F +A
Sbjct: 101 QTG-RLFVRNILYDSKEDDFRELFSQYGPLKEVHIAVD-TRTGKSKGYVYVQFNNNEDA 157
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLP 53
ILV+N P+ Q E+ +LF +G LK V +P
Sbjct: 288 ILVKNFPYGTSQEEIRDLFAEYGPLKRVLMP 318
>gi|340924295|gb|EGS19198.1| multiple RNA-binding domain-containing protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 832
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ ++AK+ KI+++N+PFQA + ++ +LF +G+L VR+PKK + RGF
Sbjct: 693 ERRREDLAKKAAVVKRKIVIKNLPFQATKKDIRDLFGTYGKLVAVRVPKKF--NSQSRGF 750
Query: 66 GFVEFITKNEA 76
F EF T EA
Sbjct: 751 AFAEFATAKEA 761
>gi|389742624|gb|EIM83810.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 973
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+TG+ + VRN+PF+A + E+ LF+AFG L++ R+ SG RG GF F K +A
Sbjct: 501 ETGTTLFVRNVPFEATEDELRTLFRAFGPLRYARITLDPA-SGRSRGTGFACFWNKEDAD 559
Query: 78 RV 79
+
Sbjct: 560 KA 561
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGF 67
R+ ++ GS + V N+P+ A ++++ LF ++ FV L + G+G +G G+
Sbjct: 10 REEGEASEVHGSTLFVSNLPYTATSTDLQTLFSDIAPVRSAFVVLEQ---GTGTSKGVGY 66
Query: 68 VEFITKNEAK 77
V F + +A+
Sbjct: 67 VAFSIREDAQ 76
>gi|344301140|gb|EGW31452.1| multiple RNA-binding domain-containing protein 1 [Spathaspora
passalidarum NRRL Y-27907]
Length = 841
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++++N+PF+A + ++ ELF AFG+LK VR+PKK S RGF FVEF EA+
Sbjct: 718 LIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDSSA--RGFAFVEFNLMKEAE 770
>gi|336262864|ref|XP_003346214.1| hypothetical protein SMAC_05751 [Sordaria macrospora k-hell]
gi|380093543|emb|CCC08506.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 836
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 9 KRKSSNVAKQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ ++AK+ G+K++++N+PF+ ++EV LF +G+L +R+PKK S RGF
Sbjct: 698 ERRREDMAKKAASQGTKLVIKNLPFEVTKNEVRTLFSTYGKLVALRIPKKFNQSS--RGF 755
Query: 66 GFVEFITKNEA 76
F EF T EA
Sbjct: 756 AFAEFSTAKEA 766
>gi|350296911|gb|EGZ77888.1| multiple RNA-binding domain-containing protein 1 [Neurospora
tetrasperma FGSC 2509]
Length = 826
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 9 KRKSSNVAKQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ ++AK+ G+K++V+N+PF+ + EV LF +G+L +R+PKK S RGF
Sbjct: 688 ERRREDMAKKAANQGTKLVVKNLPFEVTKKEVRTLFSTYGKLVALRIPKKFNQSS--RGF 745
Query: 66 GFVEFITKNEA 76
F EF T EA
Sbjct: 746 AFAEFSTAKEA 756
>gi|336464808|gb|EGO53048.1| hypothetical protein NEUTE1DRAFT_73283 [Neurospora tetrasperma FGSC
2508]
Length = 827
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 9 KRKSSNVAKQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ ++AK+ G+K++V+N+PF+ + EV LF +G+L +R+PKK S RGF
Sbjct: 689 ERRREDMAKKAANQGTKLVVKNLPFEVTKKEVRTLFSTYGKLVALRIPKKFNQSS--RGF 746
Query: 66 GFVEFITKNEA 76
F EF T EA
Sbjct: 747 AFAEFSTAKEA 757
>gi|440793396|gb|ELR14581.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 964
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++++RN+PFQA ++++ E F A G+L V +PK +G RGFGFVEF TK EA
Sbjct: 286 RLIIRNLPFQATEADLSEKFAAHGKLVDVIIPKNK-ETGNPRGFGFVEFFTKEEA 339
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3 SEATTVKRKSSNVAK-QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
+ TV KS A+ + G+ + +RN+PF A ++ F FG +++ L K V +G+
Sbjct: 473 DDDDTVPVKSEAPAEVEAGTTLFIRNLPFGATVQDLRAKFAEFGRIRYCALVKDKV-TGM 531
Query: 62 HRGFGFVEFITKNEA 76
RG F++F K A
Sbjct: 532 ARGSAFLQFAEKASA 546
>gi|320581887|gb|EFW96106.1| multiple RNA-binding domain-containing protein 1 [Ogataea
parapolymorpha DL-1]
Length = 824
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
KI+V+N+ F++ ++++ ELF FG LK VR+PKK S RGF FVEF T EA+
Sbjct: 702 KIIVKNLAFESTRNDIFELFSPFGNLKSVRVPKKFDKSA--RGFAFVEFSTLKEAE 755
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
QTG ++ +RNI + A + + ELF +G L V + +G +GF +V+F + ++A
Sbjct: 300 QTG-RLFLRNILYSATEDDFRELFGTYGSLDEVHIAVD-TRTGNSKGFAYVKFTSADDA 356
>gi|366988651|ref|XP_003674093.1| hypothetical protein NCAS_0A11540 [Naumovozyma castellii CBS 4309]
gi|342299956|emb|CCC67712.1| hypothetical protein NCAS_0A11540 [Naumovozyma castellii CBS 4309]
Length = 869
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 27 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
N+PF+A + +V ELF +FG+LK VR+PKK S RGF FVEF+ EA+
Sbjct: 748 NLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSA--RGFAFVEFLLPKEAE 796
>gi|296425387|ref|XP_002842223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638484|emb|CAZ86414.1| unnamed protein product [Tuber melanosporum]
Length = 1133
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
G ++ +RNI FQA ++V+ELF+ +G ++ VRLP G H+G+GFV F K EA
Sbjct: 836 GREVYIRNIDFQAHDNDVQELFQKYGRIEKVRLPPG-PKKGTHKGYGFVTFSAKEEA 891
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
V S V TGS + V N P A ++ + +LFK GE+ +R P S HR F +
Sbjct: 733 VDGHSIEVQVGTGSTLYVTNFPPTADETCIRDLFKDCGEIVDIRFPSLKYNS--HRRFCY 790
Query: 68 VEFITKNEAKR 78
V+F + +EA++
Sbjct: 791 VQFASSDEAQK 801
>gi|156084456|ref|XP_001609711.1| RNA recognition motif containing protein [Babesia bovis]
gi|154796963|gb|EDO06143.1| RNA recognition motif containing protein [Babesia bovis]
Length = 253
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K G +L+RN+ + + SEV E F+ FG+++ V LP+ SG+ RGFGFVEF+ + A
Sbjct: 5 KTQGYSVLIRNLKYSTRASEVREAFECFGKIRDVYLPQDY-SSGMPRGFGFVEFVEEAAA 63
>gi|399949922|gb|AFP65578.1| polyadenylate binding protein [Chroomonas mesostigmatica CCMP1168]
Length = 545
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 78
KILVRNIPF +++++F+ FG++ +R+PK +G HRGF F+EF + EAK+
Sbjct: 468 KILVRNIPFGVNLEKIKKIFENFGKIISIRMPKNKLGK--HRGFAFIEFKSLEEAKK 522
>gi|429961636|gb|ELA41181.1| hypothetical protein VICG_01780 [Vittaforma corneae ATCC 50505]
Length = 263
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KQT +KI+V+N+PFQA Q E++ +F +F + VRLPKK G HRGF F+
Sbjct: 182 KQT-NKIIVKNVPFQATQDELKSIFSSFTHVLDVRLPKK--SDGTHRGFAFI 230
>gi|344232148|gb|EGV64027.1| multiple RNA-binding domain-containing protein 1 [Candida tenuis
ATCC 10573]
Length = 840
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
I+++N+PF+A + ++ ELF AFG++K R+PKK S RGF FVEF EA+
Sbjct: 718 IIIKNLPFEATRKDIIELFGAFGQIKSARVPKKFDRSA--RGFAFVEFSLLKEAE 770
>gi|392562565|gb|EIW55745.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 985
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEA 76
+ G+ + VRN+PF+A + E+ LF+AFG L++ R+ M G +G RG GF F K +A
Sbjct: 492 EVGTTLFVRNVPFEATEDELRTLFRAFGPLRYARI--TMDGPTGRSRGTGFACFWNKEDA 549
Query: 77 KRV 79
+
Sbjct: 550 DKA 552
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 19/86 (22%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP--------------KKMVG 58
S A S+++VRN+PF + ++ +F +G + V +P ++ G
Sbjct: 249 SGPAPNRNSRLIVRNLPFDITEQDLRSIFLPYGPIHSVHIPLDVKKEEAKEEEADEEEEG 308
Query: 59 SGLHR-----GFGFVEFITKNEAKRV 79
+ R GF F+ F+++ +A++
Sbjct: 309 TSKPRPPRTKGFAFIWFLSRKDAEKA 334
>gi|395331273|gb|EJF63654.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 980
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
A + G+ + VRN+PF+A E+ LF+AFG L++ R+ +G RG GF F K +
Sbjct: 484 APEVGTTVFVRNVPFEATDDELRTLFRAFGPLRYARITMDH-ATGRSRGTGFACFWNKED 542
Query: 76 AKRV 79
A +
Sbjct: 543 ADKA 546
>gi|296804902|ref|XP_002843299.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
gi|238845901|gb|EEQ35563.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
Length = 1278
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R+ + A + G +I V N+P++ + ++ ELF A+G+++ VR+P K+ +G RGF FV
Sbjct: 955 QRQVRSGAYEEGREIYVCNLPYKTTEGDLVELFTAYGDVESVRIPTKV--NGETRGFAFV 1012
Query: 69 EFITKNEA 76
F TK+++
Sbjct: 1013 TFATKDQS 1020
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
T + + V N P A ++ + ELF + GE+ VR P + HR F +V+F + ++A
Sbjct: 874 TDTTVFVTNFPPTADENYIRELFHSCGEIAEVRFPS--LKYNTHRRFCYVQFTSSSDA 929
>gi|156084440|ref|XP_001609703.1| RNA-binding protein P22H7.02c [Babesia bovis T2Bo]
gi|154796955|gb|EDO06135.1| RNA-binding protein P22H7.02c, putative [Babesia bovis]
Length = 702
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 9/82 (10%)
Query: 4 EATTVKRKSSNVAK-------QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM 56
E + KR VA+ + SKI+V+N+ FQA + ++ +LF +G +K VR+PK +
Sbjct: 594 EMSIAKRVDKPVAEVPEHKLLKATSKIIVKNLAFQATKQDLYKLFSFYGNVKSVRIPKSL 653
Query: 57 VGSGLHRGFGFVEFITKNEAKR 78
+ +RGF FVE+ +K E+ R
Sbjct: 654 KSN--NRGFAFVEYSSKQESAR 673
>gi|401399856|ref|XP_003880652.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
gi|325115063|emb|CBZ50619.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
Length = 1099
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+K+LV+N+ FQA S++ LF A+G + V +P++ G RGF FV+F TK EA+
Sbjct: 1013 NKVLVKNLAFQASASDLRGLFSAYGNVTRVCIPRQH--EGRSRGFAFVDFATKQEAQ 1067
>gi|358058378|dbj|GAA95897.1| hypothetical protein E5Q_02555 [Mixia osmundae IAM 14324]
Length = 680
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH-RGFGFVEFITKNEAK 77
S ++++N+PF+ + E++ LFK++G +K +R+P+K + H RGF FVEF + EAK
Sbjct: 571 STLVIKNVPFEVSKKELQALFKSYGNIKSLRMPRK---ADRHTRGFAFVEFRSTAEAK 625
>gi|393222363|gb|EJD07847.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 922
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
G+ I VRN+PF A + E+ LF+AFG L++ R+ +G RG GFV F K +A +
Sbjct: 455 GTTIFVRNVPFDATEDELRILFRAFGPLRYARITMDS-DTGRSRGTGFVCFWNKEDADKA 513
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 6 TTVKRKSSN--VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP---------- 53
TT+K ++++ V S+++VRN+P+ ++++ LF FG + + +P
Sbjct: 218 TTLKLENNDKSVTPSRASRLIVRNVPWNISENDLRSLFLPFGPVYSIDIPMDKTTNCEDS 277
Query: 54 KKMVGSGLHRGFGFVEFITKNEAK 77
K +GF FV F +K +A+
Sbjct: 278 KSESTKTRAKGFAFVWFFSKKDAE 301
>gi|70946045|ref|XP_742777.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521947|emb|CAH81719.1| hypothetical protein PC000778.04.0 [Plasmodium chabaudi chabaudi]
Length = 244
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 27 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
N+ FQ + E+ +LF AFG +K VR+PK RG+GFVEF++KNE
Sbjct: 111 NLAFQVTKEELRKLFSAFGNIKNVRIPKNAYNRS--RGYGFVEFMSKNEC 158
>gi|384487651|gb|EIE79831.1| hypothetical protein RO3G_04536 [Rhizopus delemar RA 99-880]
Length = 687
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ ++++VRN+P++ +++++ +LF A G++ V+LP+K G L RGF F++F +EAK
Sbjct: 132 EVNARLIVRNLPWKYREADLSKLFNAHGKVHDVKLPRKWEGGPL-RGFAFIQFDKVDEAK 190
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
G + VRN+ F++ + ++++LFK +G + + ++ + V + L RG GFV K +A +
Sbjct: 316 GRTLFVRNLLFESTEEDLKQLFKQWGPVVYAKITRDPV-TRLSRGTGFVCMKKKEDAAKC 374
>gi|403417653|emb|CCM04353.1| predicted protein [Fibroporia radiculosa]
Length = 941
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+TG+ + VRN+PF+A + E+ LF+AFG L++ R+ G RG GFV F K +A
Sbjct: 477 ETGTTLFVRNVPFEATEDELRTLFRAFGPLRYARITMDH-EIGRSRGTGFVCFWNKADAD 535
Query: 78 RV 79
+
Sbjct: 536 KA 537
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGFVEF 70
+++++ GS + V N+P+ A +++ LF F ++ FV L + SG+ +G G+V F
Sbjct: 16 AHLSESHGSTLFVSNLPYSATSVDLQTLFSDFAPVRSAFVVLDQ---ASGISKGVGYVSF 72
Query: 71 ITKNEAK 77
K +A+
Sbjct: 73 AIKEDAQ 79
>gi|453086560|gb|EMF14602.1| multiple RNA-binding domain-containing protein 1 [Mycosphaerella
populorum SO2202]
Length = 828
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++++N+PF+A + +V LF +G+L+ VR+PKKM RGF F +F T EA+
Sbjct: 704 VIIKNLPFEATKKDVRALFGEYGQLRSVRVPKKMDRGA--RGFAFADFTTVKEAQ 756
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLP-KKMVGSGLHRGFGFVEFITKNEAKRV 79
++ VRN+ + ++E F +FG L+ + +P K GS +GF +V++ + A++
Sbjct: 307 RLFVRNLSYDVSYEDLEAEFSSFGNLEQIHIPLDKTTGSS--KGFAYVQYTDPDSAEKA 363
>gi|392586157|gb|EIW75494.1| hypothetical protein CONPUDRAFT_147133 [Coniophora puteana
RWD-64-598 SS2]
Length = 1285
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
G+ + VRNIPF+A + E+ LF+AFG L++ R+ +G RG GF F + +A V
Sbjct: 579 GTTLFVRNIPFEATEDELRTLFRAFGPLRYARITVD-TATGRSRGTGFACFWNREDADAV 637
>gi|313235941|emb|CBY25084.1| unnamed protein product [Oikopleura dioica]
Length = 465
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
G + +RN+PF A Q ++EEL K +G+ V + K V G+ +G FVEF +K+EA RV
Sbjct: 346 GRSVFLRNLPFDASQEDLEELVKPYGKAVKVSIVKNEV--GVSKGVAFVEFASKDEADRV 403
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A+ V S A++T ++++RN+P+ + +++ +F FG + V++P + G RG
Sbjct: 164 ASLVGDDDSKKARRT--RLIIRNLPWSCTEEKLKNVFHKFGAVTEVKIP--LKADGKMRG 219
Query: 65 FGFVEFITKNEA 76
FGFV+F +E+
Sbjct: 220 FGFVQFTHGHES 231
>gi|391865004|gb|EIT74296.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 1290
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
G +I V N+ F+A + +V+ELF +G ++ VRLP+K+ G +GFG+V F K EA
Sbjct: 996 GREIHVSNVDFKASERDVQELFSKYGTVELVRLPRKVDGGS--KGFGYVVFSNKEEA 1050
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
T S + V N P +A ++ + LF+ +GE+ VR P + HR F +V+F T A
Sbjct: 904 TCSTLFVTNFPPEADENYIRGLFREYGEIIDVRFPS--LKYNTHRRFCYVQFKTAEAA 959
>gi|317156878|ref|XP_001826075.2| pre-mRNA splicing factor (Prp24) [Aspergillus oryzae RIB40]
Length = 1289
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
G +I V N+ F+A + +V+ELF +G ++ VRLP+K+ G +GFG+V F K EA
Sbjct: 995 GREIHVSNVDFKASERDVQELFSKYGTVELVRLPRKVDGGS--KGFGYVVFSNKEEA 1049
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
T S + V N P +A ++ + LF+ +GE+ VR P + HR F +V+F T A
Sbjct: 903 TCSTLFVTNFPPEADENYIRGLFREYGEIIDVRFPS--LKYNTHRRFCYVQFKTAEAA 958
>gi|238492991|ref|XP_002377732.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
gi|220696226|gb|EED52568.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
Length = 1290
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
G +I V N+ F+A + +V+ELF +G ++ VRLP+K+ G +GFG+V F K EA
Sbjct: 996 GREIHVSNVDFKASERDVQELFSKYGTVELVRLPRKVDGGS--KGFGYVVFSNKEEA 1050
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
T S + V N P +A ++ + LF+ +GE+ VR P + HR F +V+F T A
Sbjct: 904 TCSTLFVTNFPPEADENYIRGLFREYGEIIDVRFPS--LKYNTHRRFCYVQFKTAEAA 959
>gi|429965863|gb|ELA47860.1| hypothetical protein VCUG_00702 [Vavraia culicis 'floridensis']
Length = 413
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+KI+++NIPFQA + E++ + + +LK +RLPKK G+H+G+ FV + +AK V
Sbjct: 335 NKIIIKNIPFQANKEEIKRILTSQVKLKDIRLPKK--RDGMHKGYCFVTLNSPEDAKAV 391
>gi|171695432|ref|XP_001912640.1| hypothetical protein [Podospora anserina S mat+]
gi|170947958|emb|CAP60122.1| unnamed protein product [Podospora anserina S mat+]
Length = 901
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 9 KRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+R+ ++AK+ +K++++N+PF+A + +V LF +G+L +R+PKK S RGF
Sbjct: 673 ERRREDLAKKANAQRTKVVIKNLPFEASKKDVRALFSNYGKLVALRIPKKFNHSS--RGF 730
Query: 66 GFVEFITKNEA 76
F EF T EA
Sbjct: 731 AFAEFSTGKEA 741
>gi|242786497|ref|XP_002480817.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces stipitatus
ATCC 10500]
gi|218720964|gb|EED20383.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces stipitatus
ATCC 10500]
Length = 1268
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+I V NI F A++++++ELF +G ++ VR+P K+ +G HRGFGF+ F K EA
Sbjct: 997 EIHVSNIHFDARENDLKELFSRYGTIETVRIPSKV--NGEHRGFGFIVFSKKEEA 1049
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
+ ++ +V +GS + V N P A ++ + LF GE+ VR P + HR F +
Sbjct: 892 INGQTVDVEMGSGSTVYVTNFPPTADEAFIRSLFSVAGEIIEVRFPS--LKYNTHRRFCY 949
Query: 68 VEFITKNEA 76
V+F + +EA
Sbjct: 950 VQFKSADEA 958
>gi|160331548|ref|XP_001712481.1| pab2 [Hemiselmis andersenii]
gi|159765929|gb|ABW98156.1| pab2 [Hemiselmis andersenii]
Length = 524
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 78
KIL+RNIPF+ + E++++++ FG++ VRLPKK H+GF F+EF EAK+
Sbjct: 447 KILIRNIPFEIQLKELKKIYENFGKILSVRLPKKTPKQ--HKGFAFIEFEKIEEAKK 501
>gi|297824993|ref|XP_002880379.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326218|gb|EFH56638.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K+++RN+PFQAK S+++E+F A G + V +PK +GL +GF FV+F K +A
Sbjct: 314 KLIIRNLPFQAKPSDIKEVFSAVGFVWDVFIPKNF-ETGLPKGFAFVKFTCKKDA 367
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
Q+ + + V +P+ +++EE F G ++ L GS HRGF FV F +
Sbjct: 17 QSATTVCVSGLPYSITNAQLEEAFSEVGPVRRCYLITNK-GSNEHRGFAFVTFALPEDVN 75
Query: 78 RV 79
R
Sbjct: 76 RA 77
>gi|356546384|ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
Length = 956
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
K+++RN+PF+AK +E+ ++F + G + V +P+K +GL +GF FV+F K +A++
Sbjct: 276 KLIIRNLPFKAKDNEIRDMFSSAGYVWDVFIPQK-PDTGLSKGFAFVKFTCKQDAEKA 332
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S + V N+P+ S++EE F G ++ + + GS HRGFG+V+F + +A R
Sbjct: 18 STLFVSNLPYSFSNSQLEETFSQVGPVRRCFMVTQK-GSAQHRGFGYVQFAVEEDANRA 75
>gi|83774819|dbj|BAE64942.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1037
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
G +I V N+ F+A + +V+ELF +G ++ VRLP+K+ G +GFG+V F K EA
Sbjct: 743 GREIHVSNVDFKASERDVQELFSKYGTVELVRLPRKVDGGS--KGFGYVVFSNKEEA 797
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
T S + V N P +A ++ + LF+ +GE+ VR P + HR F +V+F T A
Sbjct: 651 TCSTLFVTNFPPEADENYIRGLFREYGEIIDVRFPSLKYNT--HRRFCYVQFKTAEAA 706
>gi|440297375|gb|ELP90069.1| polyadenylate-binding protein, cytoplasmic and nuclear, putative
[Entamoeba invadens IP1]
Length = 283
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
SK+ V N+ + K+S++E+ F +FG +K +L M+ G +GFGFVE+ T+++AK+
Sbjct: 2 SKLYVCNLSYSTKESDLEKFFASFGNIKSCKL---MISRGYSKGFGFVEYETEDDAKKA 57
>gi|212543387|ref|XP_002151848.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces marneffei
ATCC 18224]
gi|210066755|gb|EEA20848.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces marneffei
ATCC 18224]
Length = 1275
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+I + NI F A++++++ELF +G ++ VR+P K+ +G HRGFGF+ F K EA
Sbjct: 999 EIHISNIHFDARENDLKELFSKYGTIETVRIPSKV--NGEHRGFGFIVFSKKEEA 1051
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
+ ++ +V +GS + V N P A ++ + LF GE+ VR P + HR F +
Sbjct: 894 INGQTVDVEMGSGSTVYVTNFPPTADEAFIRSLFSEAGEIVEVRFPS--LKYNTHRRFCY 951
Query: 68 VEFITKNEA 76
V+F + ++A
Sbjct: 952 VQFKSPDQA 960
>gi|241952837|ref|XP_002419140.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
gi|223642480|emb|CAX42729.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
Length = 846
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 27 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
N+PF+A + ++ ELF AFG+LK VR+PKK S RGF FVEF EA+
Sbjct: 724 NLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSA--RGFAFVEFNLMKEAE 772
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++TG ++ +RNI ++A + + +LF +G L+ V + +G +GF +V+F K++A
Sbjct: 308 EETG-RLFIRNISYEASEEDFRKLFSQYGALEEVHIAID-TRTGKSKGFLYVQFSKKDDA 365
Query: 77 KRV 79
R
Sbjct: 366 TRA 368
>gi|255726322|ref|XP_002548087.1| multiple RNA-binding domain-containing protein 1 [Candida
tropicalis MYA-3404]
gi|240134011|gb|EER33566.1| multiple RNA-binding domain-containing protein 1 [Candida
tropicalis MYA-3404]
Length = 846
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 27 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
N+PF+A + ++ ELF AFG+LK VR+PKK S RGF FVEF EA+
Sbjct: 725 NLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSA--RGFAFVEFNLMKEAE 773
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLP 53
ILV+N PF E+ ELF A+G+LK + +P
Sbjct: 495 ILVKNFPFGTTIDEIGELFAAYGQLKRMLMP 525
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++TG ++ +RNI + A + + ++LF +G L+ V + +G +GF + +F+ ++A
Sbjct: 307 EETG-RLFIRNISYDATEKDFKDLFSGYGPLEEVHIAID-TRTGKSKGFVYAQFVKSSDA 364
Query: 77 KRV 79
R
Sbjct: 365 VRA 367
>gi|68468570|ref|XP_721604.1| hypothetical protein CaO19.9215 [Candida albicans SC5314]
gi|46443527|gb|EAL02808.1| hypothetical protein CaO19.9215 [Candida albicans SC5314]
Length = 845
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 27 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
N+PF+A + ++ ELF AFG+LK VR+PKK S RGF FVEF EA+
Sbjct: 723 NLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSA--RGFAFVEFNLMKEAE 771
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++TG ++ +RNI ++A + + LF +G L+ V + +G +GF +V+F+ K +A
Sbjct: 307 EETG-RLFIRNISYEASEEDFRSLFSQYGALEEVHIAID-TRTGKSKGFLYVQFLKKEDA 364
Query: 77 KRV 79
R
Sbjct: 365 TRA 367
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLP 53
ILV+N PF E+ ELF A+G+LK + +P
Sbjct: 495 ILVKNFPFGTTIDEIGELFSAYGQLKRMLMP 525
>gi|68468327|ref|XP_721723.1| hypothetical protein CaO19.1646 [Candida albicans SC5314]
gi|74680318|sp|Q5AJS6.1|MRD1_CANAL RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|46443655|gb|EAL02935.1| hypothetical protein CaO19.1646 [Candida albicans SC5314]
Length = 841
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 27 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
N+PF+A + ++ ELF AFG+LK VR+PKK S RGF FVEF EA+
Sbjct: 723 NLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSA--RGFAFVEFNLMKEAE 771
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++TG ++ +RNI ++A + + LF +G L+ V + +G +GF +V+F+ K +A
Sbjct: 307 EETG-RLFIRNISYEASEEDFRSLFSQYGALEEVHIAID-TRTGKSKGFLYVQFLKKEDA 364
Query: 77 KRV 79
R
Sbjct: 365 TRA 367
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLP 53
ILV+N PF E+ ELF A+G+LK + +P
Sbjct: 495 ILVKNFPFGTTIDEIGELFSAYGQLKRMLMP 525
>gi|238880627|gb|EEQ44265.1| multiple RNA-binding domain-containing protein 1 [Candida albicans
WO-1]
Length = 845
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 27 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
N+PF+A + ++ ELF AFG+LK VR+PKK S RGF FVEF EA+
Sbjct: 723 NLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSA--RGFAFVEFNLMKEAE 771
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++TG ++ +RNI ++A + + LF +G L+ V + +G +GF +V+F+ K +A
Sbjct: 307 EETG-RLFIRNISYEASEEDFRNLFSQYGALEEVHIAID-TRTGKSKGFLYVQFLKKEDA 364
Query: 77 KRV 79
R
Sbjct: 365 TRA 367
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLP 53
ILV+N PF E+ ELF A+G+LK + +P
Sbjct: 495 ILVKNFPFGTTIDEIGELFSAYGQLKRMLMP 525
>gi|327351492|gb|EGE80349.1| pre-mRNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 1373
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KR+ + G +I V N+ ++A + ++ ELF A+GE++ R+P+K +G +GFGFV
Sbjct: 1033 KRQDRTGPMEEGREIHVSNLDWKATEDDLVELFTAYGEVEGARIPRK--ANGASKGFGFV 1090
Query: 69 EFITKNEAK 77
F TK A+
Sbjct: 1091 VFRTKKSAE 1099
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T + ++ +V T + + V N P A ++ V +LF +GE+ +R P + HR F
Sbjct: 929 TFEDQTISVHIGTNTTLFVTNFPPTADEAYVRDLFTPYGEVVDIRFPS--LKYNTHRRFC 986
Query: 67 FVEFITKNEA 76
+V+F T + A
Sbjct: 987 YVQFQTASAA 996
>gi|239614479|gb|EEQ91466.1| pre-mRNA splicing factor [Ajellomyces dermatitidis ER-3]
Length = 1294
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KR+ + G +I V N+ ++A + ++ ELF A+GE++ R+P+K +G +GFGFV
Sbjct: 954 KRQDRTGPMEEGREIHVSNLDWKATEDDLVELFTAYGEVEGARIPRK--ANGASKGFGFV 1011
Query: 69 EFITKNEAK 77
F TK A+
Sbjct: 1012 VFRTKKSAE 1020
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
+G++A T K + + ++V N+P + V + F+ +GE+ +R P +
Sbjct: 848 LGADAGTPPPKRD----RENATVIVENLPSDVTELRVRQFFRDYGEVVDIRFPS--LKYN 901
Query: 61 LHRGFGFVEFITKNEA 76
HR F +V+F T + A
Sbjct: 902 THRRFCYVQFQTASAA 917
>gi|261195985|ref|XP_002624396.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239587529|gb|EEQ70172.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
Length = 1294
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KR+ + G +I V N+ ++A + ++ ELF A+GE++ R+P+K +G +GFGFV
Sbjct: 954 KRQDRTGPMEEGREIHVSNLDWKATEDDLVELFTAYGEVEGARIPRK--ANGASKGFGFV 1011
Query: 69 EFITKNEAK 77
F TK A+
Sbjct: 1012 VFRTKKSAE 1020
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
+G++A T K + + ++V N+P + V + F+ +GE+ +R P +
Sbjct: 848 LGADAGTPPPKRD----RENATVIVENLPSDVTELRVRQFFRDYGEVVDIRFPS--LKYN 901
Query: 61 LHRGFGFVEFITKNEA 76
HR F +V+F T + A
Sbjct: 902 THRRFCYVQFQTASAA 917
>gi|357441411|ref|XP_003590983.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
truncatula]
gi|355480031|gb|AES61234.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
truncatula]
Length = 962
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
AK K++VRN+PF+AK++E+ + F + G + V +P+K +GL +GF FV+F K +
Sbjct: 277 AKTQKWKLIVRNLPFKAKENEIRDAFSSAGTVWEVFIPQKS-DTGLSKGFAFVKFTCKQD 335
Query: 76 A 76
A
Sbjct: 336 A 336
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
MG + +K S KQ + V N+P+ S++E+ F G ++ + + GS
Sbjct: 1 MGKKNKAMKENSDGTVKQCPLTLFVSNLPYSFTNSQLEQTFSEVGPVRRCFMVTQK-GST 59
Query: 61 LHRGFGFVEFITKNEAKRV 79
HRGFG+V+F + +A +
Sbjct: 60 QHRGFGYVQFAVEKDANQA 78
>gi|345561254|gb|EGX44350.1| hypothetical protein AOL_s00193g78 [Arthrobotrys oligospora ATCC
24927]
Length = 870
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
G +A ++K+ +KI+++N+ F+ + ++ LF +G+L+ VR+PKK +
Sbjct: 711 GDDAAAERKKADLRKNAASTKIIIKNLAFEVSEKQIRSLFGQYGKLRSVRVPKKF--NRT 768
Query: 62 HRGFGFVEFITKNEAK 77
RGFGF +F++ EA+
Sbjct: 769 SRGFGFAQFVSVREAE 784
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH--RGFGFVEFITKN 74
++TG ++ RN+ + +SE+EELF FGEL+ V LP + S H +GF +V+F + +
Sbjct: 325 EETG-RLFARNLSYSITESELEELFSPFGELEEVHLP---MDSKSHTPKGFAYVQFASPS 380
Query: 75 EA 76
A
Sbjct: 381 SA 382
>gi|240274320|gb|EER37837.1| pre-mRNA splicing factor [Ajellomyces capsulatus H143]
Length = 1334
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KR+ + G +I V N+ ++A + ++ ELF A+G+++ R+P+K +G +GFGFV
Sbjct: 974 KRQERTGPTEEGREIHVSNLDWKATEDDLVELFAAYGQVEAARIPRK--ANGASKGFGFV 1031
Query: 69 EFITKNEAK 77
F TK A+
Sbjct: 1032 VFQTKESAE 1040
>gi|393233178|gb|EJD40752.1| hypothetical protein AURDEDRAFT_127483 [Auricularia delicata
TFB-10046 SS5]
Length = 878
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
G+ + VRN+P+ A ++ LF+AFG L++ R+ SG RG GF F K +A V
Sbjct: 401 GTTVFVRNVPYDATDDDLRTLFRAFGPLRYARVTMDH-DSGRSRGTGFACFWNKEDADAV 459
>gi|225554943|gb|EEH03237.1| RNA-binding protein Prp24 [Ajellomyces capsulatus G186AR]
Length = 1309
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KR+ + G +I V N+ ++A + ++ ELF A+G+++ R+P+K +G +GFGFV
Sbjct: 949 KRQERTGPTEEGREIHVSNLDWKATEDDLVELFAAYGQVEAARIPRK--ANGASKGFGFV 1006
Query: 69 EFITKNEAK 77
F TK A+
Sbjct: 1007 VFQTKESAE 1015
>gi|336366226|gb|EGN94574.1| hypothetical protein SERLA73DRAFT_96776 [Serpula lacrymans var.
lacrymans S7.3]
Length = 889
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL---PKKMVGSGLHRGFGFVEFITKN 74
++G+ + VRN+PF+A + E+ LF+ FG L++ R+ P+ +G RG GF F K
Sbjct: 431 ESGTTLFVRNVPFEADEDELRTLFRTFGPLRYARITVDPE----TGRSRGTGFACFWNKV 486
Query: 75 EAKRV 79
+A +V
Sbjct: 487 DADKV 491
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFG 66
K + + GS + V N+P+ A ++++ LF F ++ FV L G+G+ +G G
Sbjct: 9 KARDEDTVNDHGSTLFVSNLPYTATSTDLQTLFSDFAPVRTAFVVLEH---GTGVSKGVG 65
Query: 67 FVEFITKNEA 76
+V F K +A
Sbjct: 66 YVSFAIKEDA 75
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 16/91 (17%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP----------- 53
AT +K+ A S+++VRN+PF + ++ +F G + + +P
Sbjct: 220 ATVPAKKTKGPAPNRSSRLIVRNLPFDLTEQDLRAIFLPHGPIYSIHIPMTKSQGTQDSK 279
Query: 54 -----KKMVGSGLHRGFGFVEFITKNEAKRV 79
V +GF FV ++K +A++
Sbjct: 280 EEADDSTAVTKARAKGFAFVWMLSKKDAEQA 310
>gi|325091867|gb|EGC45177.1| RNA-binding protein [Ajellomyces capsulatus H88]
Length = 1309
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KR+ + G +I V N+ ++A + ++ ELF A+G+++ R+P+K +G +GFGFV
Sbjct: 949 KRQERTGPTEEGREIHVSNLDWKATEDDLVELFAAYGQVEAARIPRK--ANGASKGFGFV 1006
Query: 69 EFITKNEAK 77
F TK A+
Sbjct: 1007 VFQTKESAE 1015
>gi|356542361|ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
Length = 958
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
K++VRN+PF+AK++E+ ++F + G + V +P+K + L +GF FV+F K +A++
Sbjct: 276 KLIVRNLPFKAKENEIRDMFSSAGCVWDVFIPQK-TNTDLSKGFAFVKFTCKQDAEKA 332
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGFVEFITKNE 75
S + V N+P+ S++EE F G ++ F+ K GS HRGFG+V+F + +
Sbjct: 15 HCSSTLFVSNLPYSFSNSQLEETFSEVGPVRRCFIVTQK---GSAQHRGFGYVQFAVEED 71
Query: 76 AKRV 79
A R
Sbjct: 72 ANRA 75
>gi|189205843|ref|XP_001939256.1| nucleolar protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975349|gb|EDU41975.1| nucleolar protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 756
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
Query: 22 KILVRNIPFQAK-QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
K+++RN+P+ K Q ++++LF+++G++ FV LPKK +G RGFGFV K A+R
Sbjct: 150 KLIIRNLPWTIKTQEDLQKLFRSYGKVNFVNLPKKP--NGELRGFGFVSLRGKKNAERA 206
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR--GFGFVE 69
N K+ + VRN+PF ++E F+ FG ++F R+ +V R G GFV
Sbjct: 308 DDNRPKREEYTLFVRNVPFTVDDERLKEHFQQFGGIRFARV---VVDRETERPKGTGFVS 364
Query: 70 FITKNE 75
F T+ +
Sbjct: 365 FFTEED 370
>gi|209696282|ref|YP_002264213.1| RNA binding protein [Aliivibrio salmonicida LFI1238]
gi|208010236|emb|CAQ80567.1| putative RNA binding protein [Aliivibrio salmonicida LFI1238]
Length = 161
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
S+ T S++ + Q + + V N+P++A +S+V++LF FG++ VRL K +G
Sbjct: 54 SKTVTDTISSADTSDQASTTLYVGNLPYRANESDVKDLFSEFGDVFAVRLMKDK-RTGKR 112
Query: 63 RGFGFVEFITKN 74
RGFGFV TK+
Sbjct: 113 RGFGFVVVATKD 124
>gi|269859929|ref|XP_002649688.1| RNA-binding protein MRD1 [Enterocytozoon bieneusi H348]
gi|220066883|gb|EED44353.1| RNA-binding protein MRD1 [Enterocytozoon bieneusi H348]
Length = 421
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
S+ + ++ ++SN K+ ++N+PFQA + E++ LF FG + VR+PK +G
Sbjct: 326 SDHSNLQTQNSNKYPLLQKKLCIKNLPFQASKDELKLLFAGFGNIVDVRIPKNNMGRS-- 383
Query: 63 RGFGFVEF 70
RGFGF+ F
Sbjct: 384 RGFGFITF 391
>gi|221061355|ref|XP_002262247.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193811397|emb|CAQ42125.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 1049
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 27 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
N+ FQ + E+ +LF AFG +K VR+PK RG+ FVEF++KNE
Sbjct: 914 NLAFQVTKEELRKLFSAFGNIKSVRIPKNAYNRS--RGYAFVEFMSKNEC 961
>gi|169856953|ref|XP_001835130.1| RNA-binding domain-containing protein [Coprinopsis cinerea
okayama7#130]
gi|116503877|gb|EAU86772.1| ribosomal processing [Coprinopsis cinerea okayama7#130]
Length = 987
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 7/65 (10%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL---PKKMVGSGLHRGFGFVEFITKN 74
++G+ + +RN+P++A + ++ LF+AFG L++ R+ P+ +G RG GF F K
Sbjct: 498 ESGTTLFIRNVPWEATEDDLRTLFRAFGPLRYARITMDPE----TGRSRGTGFACFWNKE 553
Query: 75 EAKRV 79
+A +V
Sbjct: 554 DADKV 558
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 15 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK-------------KMVGSGL 61
VA S+++VRN+PF + ++ LF G + + +PK K+V
Sbjct: 242 VAPSRASRLIVRNLPFDVTEQDLRALFLPHGPVYSIDIPKVEETVKGKEGEEDKVVQR-- 299
Query: 62 HRGFGFVEFITKNEAKRV 79
++GF FV ++K +A++
Sbjct: 300 NKGFAFVWMLSKKDAEKA 317
>gi|67536962|ref|XP_662255.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
gi|40741263|gb|EAA60453.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
Length = 1639
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+++ N G +I V N+ + A + +++ELF FG ++ VRLP+K+ G +GFG+V
Sbjct: 983 RKQDRNGPIYEGREIHVSNVNWSASEDDLKELFSRFGTVELVRLPRKVDGGS--KGFGYV 1040
Query: 69 EFITKNEA 76
F +K EA
Sbjct: 1041 VFSSKEEA 1048
>gi|115398692|ref|XP_001214935.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191818|gb|EAU33518.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1291
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
G +I V N+ ++A + +++ELF +G ++ VR+P+K+ G +GFG+V F TK EA+
Sbjct: 990 GREIHVSNVDWKANEDDLKELFSKYGHVELVRIPRKVDGGS--KGFGYVVFSTKEEAQ 1045
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ S + V N P A + + +LF FGE+ +R P + HR F +V+F T A+
Sbjct: 898 SNSTLFVTNFPPTADEKYIRDLFHEFGEIIDIRFPS--LKYNTHRRFCYVQFKTGEAAQ 954
>gi|390595344|gb|EIN04750.1| hypothetical protein PUNSTDRAFT_146379 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 989
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL---PKKMVGSGLHRGFGFVEFIT 72
A G+ + VRN+P++A + E+ LF+AFG L++ R+ P+ +G RG GF F
Sbjct: 491 ATDVGTTLFVRNVPYEATEEEMRTLFRAFGPLRYARITIDPE----TGRCRGTGFACFWN 546
Query: 73 KNEAKRV 79
K +A +
Sbjct: 547 KEDADKA 553
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
GS + V N+P+ A ++++ LF ++ + + GSG+ +G G+V F K +A+
Sbjct: 22 GSTLFVSNLPYTATSTDLQTLFSDIAPVRSAFVVTEH-GSGVSKGVGYVSFAIKEDAQ 78
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 13/82 (15%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM---------VGSG- 60
K + A S+++VRN+PF + ++ +F G + V +P K +G
Sbjct: 246 KKAKDAPSPASRLIVRNLPFNVSEQDLRAVFLPCGPIYSVHIPTKRPETEDEDADANAGK 305
Query: 61 ---LHRGFGFVEFITKNEAKRV 79
RGF FV +K +A++
Sbjct: 306 KEPRQRGFAFVWMFSKKDAEKA 327
>gi|9843655|emb|CAC03601.1| SC35-like splicing factor SCL28, 28 kD [Arabidopsis thaliana]
Length = 236
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTG-SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
+R SS + +G S +L+RN+P A+ +++ + F+ FG LK + LP+ SG RGFGF
Sbjct: 34 ERPSSRDHESSGPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNF-NSGEPRGFGF 92
Query: 68 VEFITKNEA 76
V++ +A
Sbjct: 93 VKYRYAEDA 101
>gi|156103151|ref|XP_001617268.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148806142|gb|EDL47541.1| RNA binding protein, putative [Plasmodium vivax]
Length = 1127
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 27 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
N+ FQ + E+ +LF AFG +K VR+PK RG+ FVEF++KNE
Sbjct: 992 NLAFQVTKEELRKLFSAFGNIKSVRIPKNAYNRS--RGYAFVEFMSKNEC 1039
>gi|259482511|tpe|CBF77063.1| TPA: pre-mRNA splicing factor (Prp24), putative (AFU_orthologue;
AFUA_2G01820) [Aspergillus nidulans FGSC A4]
Length = 1290
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+++ N G +I V N+ + A + +++ELF FG ++ VRLP+K+ G +GFG+V
Sbjct: 984 RKQDRNGPIYEGREIHVSNVNWSASEDDLKELFSRFGTVELVRLPRKVDGGS--KGFGYV 1041
Query: 69 EFITKNEA 76
F +K EA
Sbjct: 1042 VFSSKEEA 1049
>gi|345567796|gb|EGX50724.1| hypothetical protein AOL_s00075g150 [Arthrobotrys oligospora ATCC
24927]
Length = 1471
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
VK++ S + G ++ VRNI + A + ++ ELF +G +K +RL K G G+H G+GF
Sbjct: 1163 VKQERSGAVYE-GREVFVRNIDYAATEDDIRELFSKYGTVKSIRLISK--GRGVHSGYGF 1219
Query: 68 VEFITKNEA 76
++F T A
Sbjct: 1220 LDFETTESA 1228
>gi|401885432|gb|EJT49550.1| hypothetical protein A1Q1_01355 [Trichosporon asahii var. asahii
CBS 2479]
Length = 959
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
K S + G+ + VRN+PF+A + E+ +LF+AFG +++ R+ +G RG GFV F
Sbjct: 449 KPSLPSTDVGATVFVRNLPFEATEGELGQLFRAFGPIRYARITMDRA-TGRSRGTGFVCF 507
Query: 71 ITKNEA 76
A
Sbjct: 508 WNPEHA 513
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLP----KKMVGSGLHRGFGFVEFITKNEAK 77
+++VRN+ ++ ++++ F FG + + LP K RGF FV F+ K +A+
Sbjct: 245 RLIVRNLAWETTEADLRATFLPFGPIVSIDLPTAPSKLPNAPPRARGFAFVWFMVKKDAE 304
Query: 78 RV 79
R
Sbjct: 305 RA 306
>gi|406695116|gb|EKC98431.1| hypothetical protein A1Q2_07445 [Trichosporon asahii var. asahii
CBS 8904]
Length = 960
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
K S + G+ + VRN+PF+A + E+ +LF+AFG +++ R+ +G RG GFV F
Sbjct: 450 KPSLPSTDVGATVFVRNLPFEATEGELGQLFRAFGPIRYARITMDRA-TGRSRGTGFVCF 508
Query: 71 ITKNEA 76
A
Sbjct: 509 WNPEHA 514
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F ++S++ ++F+ FGEL+FV+L K+ +G +G+GFV+F +EAK
Sbjct: 312 RLYVGNIHFSIEESDLRDVFEPFGELEFVQLQKE--DTGRSKGYGFVQFAKSDEAK 365
>gi|300708710|ref|XP_002996529.1| hypothetical protein NCER_100368 [Nosema ceranae BRL01]
gi|239605838|gb|EEQ82858.1| hypothetical protein NCER_100368 [Nosema ceranae BRL01]
Length = 399
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
K+L++N+PFQA + ++ +LFK +++ +RLP K G HRGF FV F +K
Sbjct: 322 KLLIKNVPFQATKKDIADLFKKKYKIQGIRLPIK--RDGTHRGFAFVTFESK 371
>gi|116831499|gb|ABK28702.1| unknown [Arabidopsis thaliana]
Length = 237
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTG-SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
+R SS + +G S +L+RN+P A+ +++ + F+ FG LK + LP+ +G RGFGF
Sbjct: 34 ERPSSRDHESSGPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYY-TGEPRGFGF 92
Query: 68 VEFITKNEA 76
V++ +A
Sbjct: 93 VKYRYAEDA 101
>gi|403341233|gb|EJY69916.1| RNA binding domain-containing protein 28 [Oxytricha trifallax]
Length = 732
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
Q K++VRNI F K+ +++ F+ FG + V +P K + L+RGFGF+EF TK EA+
Sbjct: 27 QKEGKVIVRNIQFDLKEPHLKKEFQKFGTIVAVNVPIKN-ENNLNRGFGFIEFSTKEEAQ 85
Query: 78 RV 79
+
Sbjct: 86 KA 87
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK----KMVGSG----- 60
+K+ + ++ G + VRNI + + + +E FGEL++ L K ++ S
Sbjct: 180 KKNRKIQQEQGKTLFVRNIGYDTTEQQFKEFMGNFGELQYAVLCKVKELRLNNSDGSSQQ 239
Query: 61 -LHRGFGFVEFITKNEAKRV 79
H+G GFV++ N A+++
Sbjct: 240 QTHKGTGFVQYKDNNVAEQL 259
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
K +V K+ S + V N+ F A + V E+F +G +K VRLP +G +GFG+VE
Sbjct: 98 KFGDVPKEPSSTLFVGNVSFDANEDMVTEVFSEYGSIKAVRLPTDR-DTGALKGFGYVEM 156
Query: 71 ITKNEAK 77
+ ++AK
Sbjct: 157 FSIDDAK 163
>gi|30687014|ref|NP_197382.3| SC35-like splicing factor 28 [Arabidopsis thaliana]
gi|91806878|gb|ABE66166.1| 28 kDa SC35-like splicing factor [Arabidopsis thaliana]
gi|332005232|gb|AED92615.1| SC35-like splicing factor 28 [Arabidopsis thaliana]
Length = 236
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTG-SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
+R SS + +G S +L+RN+P A+ +++ + F+ FG LK + LP+ +G RGFGF
Sbjct: 34 ERPSSRDHESSGPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYY-TGEPRGFGF 92
Query: 68 VEFITKNEA 76
V++ +A
Sbjct: 93 VKYRYAEDA 101
>gi|26452521|dbj|BAC43345.1| putative Serine/arginine rich protein [Arabidopsis thaliana]
Length = 236
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTG-SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
+R SS + +G S +L+RN+P A+ +++ + F+ FG LK + LP+ +G RGFGF
Sbjct: 34 ERPSSRDHESSGPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYY-TGEPRGFGF 92
Query: 68 VEFITKNEA 76
V++ +A
Sbjct: 93 VKYRYAEDA 101
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
+ Q + + V NI F A Q V E+F+ +G + VRLP +G +GFG+VEF +
Sbjct: 354 DTPSQPSATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRE-TGAPKGFGYVEFSSI 412
Query: 74 NEAK 77
EAK
Sbjct: 413 EEAK 416
>gi|322695427|gb|EFY87235.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 725
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGF 65
TV +K Q K++VRN+P+ K SE + LFK++G++KF LP+ G RGF
Sbjct: 131 TVHKKPGREESQKPPKLIVRNLPWSIKTSEQLSHLFKSYGKVKFADLPQ---SKGKLRGF 187
Query: 66 GFVEFITKNEAKRV 79
GFV K A++
Sbjct: 188 GFVTIRGKKNAEKA 201
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 8 VKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
V KSS K T S + +RN+PF +++ F FG +++ R+ V + G
Sbjct: 311 VDSKSSAEKKTTDNSSTVFIRNLPFTTTDEQLKGFFSHFGAVRYARVVIDKV-TEKPAGT 369
Query: 66 GFVEFITKNEAK 77
GFV F+ +++AK
Sbjct: 370 GFVCFVKQSDAK 381
>gi|440492802|gb|ELQ75340.1| RNA-binding protein (RRM superfamily) [Trachipleistophora hominis]
Length = 413
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K++++N+PFQA + E++ + +LK +RLPKK G+H+G+ FV + +AK V
Sbjct: 335 NKLIIKNVPFQANKEEIKRILTTQVKLKDIRLPKK--RDGMHKGYCFVTLNSPEDAKIV 391
>gi|399218801|emb|CCF75688.1| unnamed protein product [Babesia microti strain RI]
Length = 765
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 3 SEATTVKRKSSNVAKQT--GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
+E T K SS + G V+N+PF+A Q ++E +F+ +GEL++ +L K +G
Sbjct: 479 AEITNGKPSSSTINSDVNEGKTAFVQNVPFEATQEQLESIFRVYGELEYAKLVKD--PAG 536
Query: 61 LHRGFGFVEFITK 73
++G FV+F+TK
Sbjct: 537 RNKGTAFVKFMTK 549
>gi|82793820|ref|XP_728191.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484422|gb|EAA19756.1| RNA recognition motif, putative [Plasmodium yoelii yoelii]
Length = 767
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 27 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
N+ FQ + E+++LF AFG +K VR+PK RG+GFVEF++KNE
Sbjct: 634 NLAFQVTKEELKKLFSAFGNIKNVRIPKNAYNRS--RGYGFVEFMSKNE 680
>gi|449545564|gb|EMD36535.1| hypothetical protein CERSUDRAFT_106374 [Ceriporiopsis subvermispora
B]
Length = 943
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+TG+ + VRN+PF+A ++ LF+AFG L++ R+ +G RG GFV F
Sbjct: 478 ETGTTLFVRNVPFEATDDDLRTLFRAFGPLRYARVAMD-PETGRSRGTGFVCF 529
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK----------------KMVGS 59
A S+++VRN+PF + ++ +F +G + V +P+ K V
Sbjct: 242 APSRSSRLIVRNMPFNITEQDLRAIFLPYGPIYSVDIPEKKDTPADGDEEDDAENKQVKR 301
Query: 60 GLHRGFGFVEFITKNEAKRV 79
RGF FV ++K +A++
Sbjct: 302 PRRRGFAFVWMLSKKDAEKA 321
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGFVEFITKNEA 76
GS + V N+P+ A ++++ LF ++ FV + GSG+ +G G+V F + +A
Sbjct: 22 GSTLFVSNLPYTATSTDLKTLFSDIAPVRTAFVVTEQ---GSGVSKGVGYVSFAIREDA 77
>gi|326427558|gb|EGD73128.1| hypothetical protein PTSG_04841 [Salpingoeca sp. ATCC 50818]
Length = 285
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
TG K+ V N+ + K S++EE F FG++K V LP V +G RGFGFV F + EA+
Sbjct: 78 TGYKLFVGNLNYDTKVSDMEEAFGKFGKVKDVFLPMHRV-TGTCRGFGFVTFADRTEAE 135
>gi|301096303|ref|XP_002897249.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
gi|262107334|gb|EEY65386.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
Length = 543
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 25 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
V N+PFQ E+ +LF FGE+ V +P+ GS RGF FV FI K +A+
Sbjct: 361 VDNVPFQIGSDELRDLFSKFGEIGDVYIPRAR-GSNESRGFAFVRFIEKRDAE 412
>gi|68075777|ref|XP_679808.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500633|emb|CAH98045.1| conserved hypothetical protein [Plasmodium berghei]
Length = 997
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 27 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
N+ FQ + E+++LF AFG +K VR+PK RG+GFVEF++KNE
Sbjct: 864 NLAFQVTKEELKKLFSAFGNIKNVRIPKNAYNRS--RGYGFVEFMSKNE 910
>gi|452003351|gb|EMD95808.1| hypothetical protein COCHEDRAFT_1190998 [Cochliobolus
heterostrophus C5]
Length = 756
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 22 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
KI+VRN+P+ K E +E+LF+++G++ F LPKK +G RGFGFV K A++
Sbjct: 151 KIIVRNLPWTIKTPEDLEKLFRSYGKVNFANLPKKP--NGELRGFGFVSLRGKKNAEKA 207
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 10 RKSSNVAKQTGS-------KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
R++ N +GS ++ V NI F +S+++ +F+ FGEL+FV+L K +G
Sbjct: 259 RQARNPEASSGSNHAAPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKDE--TGRS 316
Query: 63 RGFGFVEFITKNEAK 77
RG+GFV+F N+A+
Sbjct: 317 RGYGFVQFRDPNQAR 331
>gi|403222919|dbj|BAM41050.1| DAZ-associated protein 1 [Theileria orientalis strain Shintoku]
Length = 395
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
++S + K +I + IPF A + ++EE FK FG + PK+ S L++GFGF+
Sbjct: 103 KESVDDEKINAHRIFITRIPFDATKDDLEEYFKKFGTVYDAYCPKQSNYSTLNKGFGFIS 162
Query: 70 FITKNEAKRV 79
F ++ ++V
Sbjct: 163 FDSEETIQKV 172
>gi|154270706|ref|XP_001536207.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409781|gb|EDN05221.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1384
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KR+ + G +I V N+ ++A + ++ ELF A+G+++ R+P+K +G +GFGFV
Sbjct: 1024 KRQERTGPTEEGREIHVSNLDWKATEDDLVELFAAYGQVEAARIPRK--ANGASKGFGFV 1081
Query: 69 EFITKNEAK 77
F K A+
Sbjct: 1082 VFQAKESAE 1090
>gi|409074598|gb|EKM74992.1| hypothetical protein AGABI1DRAFT_47085, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 777
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ G+ + VRN+PF A E+ LF++FG L++ R+ + +G RG GF F +A
Sbjct: 381 EVGTTLFVRNVPFTATDDELRLLFRSFGPLRYARITMDL-DTGRSRGTGFACFWNLEDAD 439
Query: 78 RV 79
+V
Sbjct: 440 KV 441
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
A S+++VRN+PF + ++ +F +G + + +P +GF FV ++K +
Sbjct: 222 APSHASRLIVRNLPFDITEQDLRAVFLPYGPIHEIHIPGVEGSKTRTKGFAFVWMLSKPD 281
Query: 76 AKRV 79
A+R
Sbjct: 282 AERA 285
>gi|119191127|ref|XP_001246170.1| hypothetical protein CIMG_05611 [Coccidioides immitis RS]
gi|392869018|gb|EAS30379.2| pre-mRNA splicing factor [Coccidioides immitis RS]
Length = 1296
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KR++ + A + G +I + N+ ++A + ++ ELF AFG+++ R+P K G +GFGFV
Sbjct: 975 KRQARSGAFEEGREIHISNLDWKATEDDLIELFTAFGKVEVARIPTK--ADGGSKGFGFV 1032
Query: 69 EFITKNEA 76
F T A
Sbjct: 1033 AFSTPEAA 1040
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
+V +T + + V N P +A +S + +F GE+ VR P + HR F +V+F +
Sbjct: 889 SVQLETKATLFVTNFPPEADESYIRRIFSPHGEIVEVRFPSLKFNT--HRRFCYVQFASA 946
Query: 74 NEA 76
+A
Sbjct: 947 ADA 949
>gi|255944605|ref|XP_002563070.1| Pc20g05340 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587805|emb|CAP85863.1| Pc20g05340 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1257
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
G +I V NI + A + ++ ELF FGE++ + + +K+ G RGFGFV F TK+ A
Sbjct: 977 GREIYVSNIAWDANEKDLRELFSKFGEIEKILIERKITGGS--RGFGFVTFSTKDAA 1031
>gi|451856277|gb|EMD69568.1| hypothetical protein COCSADRAFT_32266 [Cochliobolus sativus ND90Pr]
Length = 754
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 22 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
KI+VRN+P+ K E +E+LF+ +G++ F LPKK +G RGFGFV K A++
Sbjct: 152 KIIVRNLPWTIKTPEDLEKLFRCYGKVNFANLPKKP--NGELRGFGFVSLRGKKNAEKA 208
>gi|350635663|gb|EHA24024.1| hypothetical protein ASPNIDRAFT_128739 [Aspergillus niger ATCC 1015]
Length = 1595
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R+ G +I V N+ ++A + +VEELF FG ++ VR+P+K+ G +GF +V
Sbjct: 990 RRQDRQGPMYEGREIHVSNLDWKASEQDVEELFLRFGTVELVRIPRKVDGGS--KGFCYV 1047
Query: 69 EFITKNEAK 77
F +K EA+
Sbjct: 1048 VFSSKEEAE 1056
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+GS + V N P A + + +LF+ GE+ +R P + HR F +V+F T EA
Sbjct: 909 SGSTVFVTNFPATADEQYIRDLFREHGEIIDIRFPS--LKYNTHRRFCYVQFKTAGEA 964
>gi|303315541|ref|XP_003067778.1| RNA recognition motif containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240107448|gb|EER25633.1| RNA recognition motif containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|320035369|gb|EFW17310.1| hypothetical protein CPSG_05753 [Coccidioides posadasii str.
Silveira]
Length = 1296
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KR++ + A + G +I + N+ ++A + ++ ELF AFG+++ R+P K G +GFGFV
Sbjct: 975 KRQARSGAFEEGREIHISNLDWKATEDDLIELFTAFGKVEVARIPTK--ADGGSKGFGFV 1032
Query: 69 EFITKNEA 76
F T A
Sbjct: 1033 AFSTPEAA 1040
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
+V +T + + V N P +A +S + +F GE+ VR P + HR F +V+F +
Sbjct: 889 SVQLETKATLFVTNFPPEADESYIRRIFSPHGEIVEVRFPSLKFNT--HRRFCYVQFASA 946
Query: 74 NEA 76
+A
Sbjct: 947 ADA 949
>gi|453088735|gb|EMF16775.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 761
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 8 VKRKSSNVAKQ-TGSKILVRNIPFQAK-QSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+KRK + V +Q SK++VRN+P+ K ++E+LF+++G++K +P+K G GL GF
Sbjct: 148 LKRKEAEVERQHQPSKLIVRNLPWSIKGPKQLEKLFQSYGKIKKAYVPQK--GPGLMAGF 205
Query: 66 GFV 68
GFV
Sbjct: 206 GFV 208
>gi|407042525|gb|EKE41378.1| enhancer binding protein 2 (EBP2), putative [Entamoeba nuttalli
P19]
Length = 219
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+KI V N+ FQ KQ ++E+ F FG+LK L MV G +GFGFVE+ T+ E +
Sbjct: 2 TKIYVSNLSFQTKQEDMEKYFAVFGKLKSCIL---MVHRGRSKGFGFVEYETEEETNKA 57
>gi|18399701|ref|NP_565513.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|4567275|gb|AAD23688.1| expressed protein [Arabidopsis thaliana]
gi|16604631|gb|AAL24108.1| unknown protein [Arabidopsis thaliana]
gi|27754736|gb|AAO22811.1| unknown protein [Arabidopsis thaliana]
gi|330252084|gb|AEC07178.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 1003
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K+++RN+PFQAK S+++ +F A G + V +PK +GL +GF FV+F K +A
Sbjct: 332 KLIIRNLPFQAKPSDIKVVFSAVGFVWDVFIPKNF-ETGLPKGFAFVKFTCKKDA 385
>gi|328782196|ref|XP_624495.3| PREDICTED: RNA-binding protein 28-like [Apis mellifera]
Length = 749
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ NV + +I+VRNIPF+A + +V++L+++FGE+ + PK+ G+ + G F++F
Sbjct: 32 TDNVDENKKPRIIVRNIPFKATKEDVKKLYESFGEILEINFPKRTDGTLV--GCCFIQF 88
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
++++VRN+ FQA + ++E+ F +G ++ +++ K+ G+ + G FV+F
Sbjct: 192 ARVVVRNLSFQAMEEDLEKHFSQYGTIEEIKILKREDGAKI--GCAFVQF 239
>gi|197336379|ref|YP_002157218.1| RNA-binding protein [Vibrio fischeri MJ11]
gi|423687167|ref|ZP_17661975.1| RNA-binding protein [Vibrio fischeri SR5]
gi|197317869|gb|ACH67316.1| RNA-binding protein [Vibrio fischeri MJ11]
gi|371493566|gb|EHN69167.1| RNA-binding protein [Vibrio fischeri SR5]
Length = 160
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
+ Q + + V N+P++A +S+V+ELF FG++ VRL K +G RGFGFV TK+
Sbjct: 66 SDQASTTLYVGNLPYRANESDVKELFAEFGDVFAVRLMKDK-RTGKRRGFGFVVVATKD 123
>gi|426193181|gb|EKV43115.1| hypothetical protein AGABI2DRAFT_188163, partial [Agaricus bisporus
var. bisporus H97]
Length = 882
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ G+ + VRN+PF A E+ LF++FG L++ R+ + +G RG GF F +A
Sbjct: 437 EVGTTLFVRNVPFTATDDELRLLFRSFGPLRYARITMDL-DTGRSRGTGFACFWNLEDAD 495
Query: 78 RV 79
+V
Sbjct: 496 KV 497
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 15 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
+A S+++VRN+PF + ++ +F +G + + +P +GF FV ++K
Sbjct: 234 LAPSHASRLIVRNLPFDITEQDLRAVFLPYGPIHEIHIPGVEGSKTRTKGFAFVWMLSKP 293
Query: 75 EAKRV 79
+A+R
Sbjct: 294 DAERA 298
>gi|358387438|gb|EHK25033.1| hypothetical protein TRIVIDRAFT_54648 [Trichoderma virens Gv29-8]
Length = 1024
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
++KS A G ++ V + A + E+ E+F +G + + +P+ + G G RGF FV
Sbjct: 746 RKKSREGAVAEGREVHVSGLSPSATEDEIREIFSKYGTISRINVPRNISGKG--RGFAFV 803
Query: 69 EFITKNEAKR 78
+F TK+EA++
Sbjct: 804 DFATKDEAEK 813
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL FV+L K +G RG+GFV+F N+A+
Sbjct: 296 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDE--NGRSRGYGFVQFRDPNQAR 349
>gi|269860405|ref|XP_002649924.1| RNA-binding protein, predicted [Enterocytozoon bieneusi H348]
gi|220066684|gb|EED44158.1| RNA-binding protein, predicted [Enterocytozoon bieneusi H348]
Length = 336
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 6 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
T V K+ V+ + S + ++N+PF K+ +++E F FG++ + +P+ G ++GF
Sbjct: 167 TVVIEKAKPVSPKLYS-VFIKNLPFSIKKDDLKETFSKFGKIHNISIPEDKENEGRNKGF 225
Query: 66 GFVEFITKNEAK 77
GF++F+ K A+
Sbjct: 226 GFIDFVDKKSAE 237
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL FV+L K +G RG+GFV+F N+A+
Sbjct: 307 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDE--NGRSRGYGFVQFRDPNQAR 360
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
EATT SN + ++ V NI F +S+++ +F+ FGEL+FV+L K+ G R
Sbjct: 264 EATT-----SNPNQIPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKEE--QGRSR 316
Query: 64 GFGFVEFITKNEAK 77
G+GFV+F N+A+
Sbjct: 317 GYGFVQFRDPNQAR 330
>gi|330935481|ref|XP_003304989.1| hypothetical protein PTT_17723 [Pyrenophora teres f. teres 0-1]
gi|311318179|gb|EFQ86926.1| hypothetical protein PTT_17723 [Pyrenophora teres f. teres 0-1]
Length = 756
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 22 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
K+++RN+P+ K E ++++F+++G++ FV LPKK +G RGFGFV K A+R
Sbjct: 150 KLIIRNLPWTIKTPEDLQKIFRSYGKVNFVNLPKKP--NGELRGFGFVSLRGKKNAERA 206
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL FV+L K +G RG+GFV+F N+A+
Sbjct: 305 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDE--NGRSRGYGFVQFRDPNQAR 358
>gi|258564845|ref|XP_002583167.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906868|gb|EEP81269.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1297
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KR++ + A + G +I + N+ ++A + ++ ELF AFG+++ R+P K G +GFGFV
Sbjct: 976 KRQARSGAFEEGREIHISNLDWKATEDDLVELFMAFGKVEVARIPTK--ADGGSKGFGFV 1033
Query: 69 EFITKNEA 76
F T A
Sbjct: 1034 AFSTPETA 1041
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
++ +V +T + + V N P +A ++ + +F +GE+ VR P + HR F +V+F
Sbjct: 887 RTISVQLETKATLFVTNFPPEADEAYIRRIFGPYGEIAEVRFPSLKFNT--HRRFCYVQF 944
Query: 71 ITKNEA 76
+ +A
Sbjct: 945 ASTVDA 950
>gi|159128731|gb|EDP53845.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus fumigatus
A1163]
Length = 1303
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
G +I + NI ++A + +++E+F+ +G ++ VR+P+K+ G +GFG++ F TK EA+
Sbjct: 1000 GREIHISNIDWKANEDDLKEVFQKYGTIETVRIPRKVDGGS--KGFGYIVFSTKEEAE 1055
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+GS + V N P A +S ++ LF+ +GE+ +R P + HR F +V+F + +A
Sbjct: 908 SGSTLFVTNFPSTADESYIQNLFREYGEIVDIRFPS--LKYNTHRRFCYVQFKSSGDA 963
>gi|123485368|ref|XP_001324476.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121907359|gb|EAY12253.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 576
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 21 SKILVRNIPFQ-AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ ++V+N+PF K+SE+ E FK G +K +R+ KK G HRGF F++F T+ A+
Sbjct: 475 TTLIVKNLPFTVTKKSEIAEAFKHVGNIKAIRMTKKRNEQG-HRGFCFIDFTTRQAAQ 531
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
T +++ V+NIP+++ E++ F+ FG ++ V LP V G +RGF FV+F
Sbjct: 190 TTTRLYVKNIPYKSTAEEIKARFEEFGPVEDVSLPTSEV-PGENRGFAFVKF 240
>gi|70988933|ref|XP_749317.1| pre-mRNA splicing factor (Prp24) [Aspergillus fumigatus Af293]
gi|66846948|gb|EAL87279.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus fumigatus
Af293]
Length = 1303
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
G +I + NI ++A + +++E+F+ +G ++ VR+P+K+ G +GFG++ F TK EA+
Sbjct: 1000 GREIHISNIDWKANEDDLKEVFQKYGTIETVRIPRKVDGGS--KGFGYIVFSTKEEAE 1055
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+GS + V N P A +S ++ LF+ +GE+ +R P + HR F +V+F + +A
Sbjct: 908 SGSTLFVTNFPSTADESYIQNLFREYGEIVDIRFPS--LKYNTHRRFCYVQFKSSGDA 963
>gi|449516393|ref|XP_004165231.1| PREDICTED: RNA-binding protein 28-like, partial [Cucumis sativus]
Length = 678
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K++VRN+PF+AK+ E++ F + G + V +P+ +GL +GF FV+F K +A
Sbjct: 8 KVIVRNLPFKAKEKEIKNTFSSAGFVWDVMMPQNS-DTGLSKGFAFVKFTCKQDA 61
>gi|449461647|ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucumis sativus]
Length = 966
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
K++VRN+PF+AK+ E++ F + G + V +P+ +GL +GF FV+F K +A+
Sbjct: 296 KVIVRNLPFKAKEKEIKNTFSSAGFVWDVMMPQNS-DTGLSKGFAFVKFTCKQDAE 350
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S + V N P+ S++EE F G ++ + + GS HRGFGFV+F +A R
Sbjct: 23 STVFVNNFPYSFTNSQLEETFSDVGPVRRCFMVTQK-GSTEHRGFGFVQFAVAEDANRA 80
>gi|320590573|gb|EFX03016.1| pre-mRNA splicing factor [Grosmannia clavigera kw1407]
Length = 1137
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
++KS A + G ++ V+N+ F + +++LF+ +G ++ VRL + + G RG GFV
Sbjct: 798 RKKSREGAAEEGREVHVKNLGFDVDEQGLQDLFERYGNVERVRLLRNI--GGRSRGSGFV 855
Query: 69 EFITKNEAKR 78
F TK EA+R
Sbjct: 856 VFATKEEAER 865
>gi|121710854|ref|XP_001273043.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
gi|119401193|gb|EAW11617.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
Length = 1310
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 1 MGSEATTVKRKSSNVAKQ-------TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP 53
+GS+ V + S KQ G +I V NI ++A + ++++LF +G ++ VR+P
Sbjct: 979 VGSDLNLVVKISDPSRKQDRHGPIYEGREIHVSNIDWKASEDDLKDLFSKYGRVETVRIP 1038
Query: 54 KKMVGSGLHRGFGFVEFITKNEA 76
+K+ G +GFG++ F TK EA
Sbjct: 1039 RKVDGGS--KGFGYIVFSTKEEA 1059
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+GS + V N P A +S + LF +GE+ VR P + HR F +V+F + +A
Sbjct: 913 SGSTLFVTNFPSTADESYIRNLFHEYGEIIDVRFPS--LKYNTHRRFCYVQFKSAEDA 968
>gi|164661595|ref|XP_001731920.1| hypothetical protein MGL_1188 [Malassezia globosa CBS 7966]
gi|159105821|gb|EDP44706.1| hypothetical protein MGL_1188 [Malassezia globosa CBS 7966]
Length = 963
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ G+ + +RN+P+QA + E+++LF++FG L++ R+ + RG GF+ F ++ A
Sbjct: 479 EAGTTLFIRNLPYQATEQELKDLFRSFGPLRYARITMD-PATNRSRGTGFLCFWKRSSA 536
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S+++VRN+PF ++ +F +G L + +P +G RGF FV +++K++A +
Sbjct: 275 SRLIVRNLPFDMTVEDLRAVFLPYGALYNITIPTSE-ENGRGRGFAFVWYVSKSDASKA 332
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +++++ +F+ FGEL+FV+L K +G RG+GFV+F N+A+
Sbjct: 274 RLYVGNIHFSIDENDLQSVFEPFGELEFVQLQKDE--TGRSRGYGFVQFRDPNQAR 327
>gi|396465644|ref|XP_003837430.1| similar to ribosome biogenesis (Nop4) [Leptosphaeria maculans JN3]
gi|312213988|emb|CBX93990.1| similar to ribosome biogenesis (Nop4) [Leptosphaeria maculans JN3]
Length = 759
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 22 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
K+++RN+P+ K E +++LF++FG++ FV LPKK +G RGFGFV
Sbjct: 158 KLIIRNLPWTVKTPEDLQKLFRSFGKVNFVNLPKKP--NGELRGFGFVSL 205
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR--GFGFVEFITKNE 75
I +RN+PF ++E F+ FG ++F R+ ++ R G GFV F T+ +
Sbjct: 327 IFIRNLPFTVDDERLKEHFQQFGGVRFARV---VIDRETERPKGTGFVSFFTEED 378
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++++F+ FGEL FV+L K+ G RG+GFV+F N+A+
Sbjct: 291 RLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEE--GGRSRGYGFVQFRDPNQAR 344
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +++++ +F+ FGEL+FV+L K +G RG+GFV+F N+A+
Sbjct: 269 RLYVGNIHFSITENDIQNVFEPFGELEFVQLQKDE--TGRSRGYGFVQFRDPNQAR 322
>gi|119497981|ref|XP_001265748.1| pre-mRNA splicing factor (Prp24), putative [Neosartorya fischeri NRRL
181]
gi|119413912|gb|EAW23851.1| pre-mRNA splicing factor (Prp24), putative [Neosartorya fischeri NRRL
181]
Length = 1281
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
G +I + NI ++A + +++E+F+ +G ++ VR+P+K+ G +GFG++ F TK EA+
Sbjct: 978 GREIHISNIDWKANEGDLKEVFQKYGTIETVRIPRKVDGGS--KGFGYIVFSTKEEAE 1033
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+GS + V N P A +S + LF+ +GE+ +R P + HR F +V+F + +A
Sbjct: 886 SGSTLFVTNFPSTADESYIRNLFREYGEIVDIRFPS--LKYNTHRRFCYVQFKSSGDA 941
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++++F+ FGEL FV+L K+ G RG+GFV+F N+A+
Sbjct: 290 RLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEE--GGRSRGYGFVQFRDPNQAR 343
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++++F+ FGEL FV+L K+ G RG+GFV+F N+A+
Sbjct: 291 RLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEE--GGRSRGYGFVQFRDPNQAR 344
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++++F+ FGEL FV+L K+ G RG+GFV+F N+A+
Sbjct: 289 RLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEE--GGRSRGYGFVQFRDPNQAR 342
>gi|443916594|gb|ELU37606.1| ribosomal processing [Rhizoctonia solani AG-1 IA]
Length = 931
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV-GS----GLHRGFGFVEF 70
A S++++RN+P+ +S++ LF FG + + LP GS G HRGF F+
Sbjct: 203 APSRSSRLIIRNLPWHVTESDLHALFAPFGPIFSITLPAAQSEGSESKPGRHRGFAFIWM 262
Query: 71 ITKNEAKRV 79
+++ +A+R
Sbjct: 263 LSRADAERA 271
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
G+ + VRN+PF+A + ++ LF+AFG L++ R+ +G RG GFV F
Sbjct: 417 GTTLFVRNVPFEATEDDLRALFRAFGPLRYARITMDH-ETGRSRGTGFVCF 466
>gi|156340877|ref|XP_001620582.1| hypothetical protein NEMVEDRAFT_v1g222953 [Nematostella vectensis]
gi|156205685|gb|EDO28482.1| predicted protein [Nematostella vectensis]
Length = 180
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
GS+ + + +++ K T + V N+PF AK+SE+EELF G +K VRL G
Sbjct: 97 GSQNQQIDKFPTSLDKHT---LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKP- 152
Query: 62 HRGFGFVEF 70
+G+G+VE+
Sbjct: 153 -KGYGYVEY 160
>gi|998355|gb|AAA76605.1| colony 1 [Ophiostoma ulmi]
Length = 826
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+K+ A G ++ ++NIP + + E+E+L +G +K VRL M G RG FV+
Sbjct: 466 KKAREGATDEGREVHIKNIPQEFDEKEIEQLVSKYGTVKRVRLLHNMAGRS--RGSAFVD 523
Query: 70 FITKNEAKRV 79
TK+EA+RV
Sbjct: 524 LETKDEAERV 533
>gi|358368612|dbj|GAA85228.1| pre-mRNA splicing factor [Aspergillus kawachii IFO 4308]
Length = 1303
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R+ G +I V N+ ++A + +VEELF FG ++ VR+P+K+ G +GF +V
Sbjct: 991 RRQDRQGPMYEGREIHVSNLDWKASEQDVEELFLRFGTVELVRIPRKVDGGS--KGFCYV 1048
Query: 69 EFITKNEAK 77
F +K EA+
Sbjct: 1049 VFSSKEEAE 1057
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+GS + V N P A + + +LF+ GE+ +R P + HR F +V+F T EA
Sbjct: 910 SGSTVFVTNFPATADEQYIRDLFREHGEIIDIRFPS--LKYNTHRRFCYVQFKTAGEA 965
>gi|253760757|ref|XP_002489004.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
gi|241947359|gb|EES20504.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
Length = 208
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K+ +LVRNIP + E+ F+ FG ++ V +PK SG RGF FVEF+ +A
Sbjct: 87 KEGSGSLLVRNIPLSVRAEELRVPFERFGPVRDVYIPKDYY-SGEPRGFAFVEFVDPYDA 145
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++++F+ FGEL FV+L K+ G RG+GFV+F N+A+
Sbjct: 306 RLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEE--GGRSRGYGFVQFRDPNQAR 359
>gi|345563952|gb|EGX46935.1| hypothetical protein AOL_s00097g361 [Arthrobotrys oligospora ATCC
24927]
Length = 546
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F ++E++++F FG+L+FV+L K+ SG RG+GFV++ N AK
Sbjct: 268 RLYVGNIHFSITENELQQVFAPFGDLEFVQLQKEE--SGRSRGYGFVQYRDPNNAK 321
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +++++ +F+ FGEL+FV+L K +G RG+GFV+F N+A+
Sbjct: 269 RLYVGNIHFSITENDIQNVFEPFGELEFVQLQKDE--TGRSRGYGFVQFRDPNQAR 322
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++++F+ FGEL FV+L K+ G RG+GFV+F N+A+
Sbjct: 302 RLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEE--GGRSRGYGFVQFRDPNQAR 355
>gi|354543761|emb|CCE40483.1| hypothetical protein CPAR2_105190 [Candida parapsilosis]
Length = 748
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
RK SN KQ I VRNIP+ A + ++E F+AFG +K+ LP +GL +G FV
Sbjct: 316 RKKSN--KQEAYSIFVRNIPYDADEESLKEHFEAFGPVKYA-LPVIDKDTGLSKGSAFVA 372
Query: 70 F 70
F
Sbjct: 373 F 373
>gi|409043823|gb|EKM53305.1| hypothetical protein PHACADRAFT_185997 [Phanerochaete carnosa
HHB-10118-sp]
Length = 959
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ G+ + VRN+PF+A + E+ +F+AFG L++ ++ +G RG FV F K A
Sbjct: 493 EVGTTVFVRNVPFEATEDELRAVFRAFGPLRYAKIAVDHE-TGRSRGTSFVCFWNKEHAD 551
Query: 78 RV 79
+V
Sbjct: 552 KV 553
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++++F+ FGEL FV+L K+ G RG+GFV+F N+A+
Sbjct: 306 RLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEE--GGRSRGYGFVQFRDPNQAR 359
>gi|190348274|gb|EDK40698.2| hypothetical protein PGUG_04796 [Meyerozyma guilliermondii ATCC
6260]
Length = 713
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
KQ + VRNIP+ A Q ++E F FG++K+ LP +GL RG FV F+++
Sbjct: 296 KQEPYAVFVRNIPYDADQDSLKEHFSQFGDVKYA-LPVIDKETGLARGSAFVAFVSE 351
>gi|317029450|ref|XP_001391615.2| pre-mRNA splicing factor (Prp24) [Aspergillus niger CBS 513.88]
Length = 1302
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R+ G +I V N+ ++A + +VEELF FG ++ VR+P+K+ G +GF +V
Sbjct: 990 RRQDRQGPMYEGREIHVSNLDWKASEQDVEELFLRFGTVELVRIPRKVDGGS--KGFCYV 1047
Query: 69 EFITKNEAK 77
F +K EA+
Sbjct: 1048 VFSSKEEAE 1056
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+GS + V N P A + + +LF+ GE+ +R P + HR F +V+F T EA
Sbjct: 909 SGSTVFVTNFPATADEQYIRDLFREHGEIIDIRFPS--LKYNTHRRFCYVQFKTAGEA 964
>gi|388511899|gb|AFK44011.1| unknown [Lotus japonicus]
Length = 220
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
A++ G KI V ++P +A ++ + F FG + V +P+ SG HRGFGFV F
Sbjct: 79 AREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSG-HRGFGFVTFAEDGV 137
Query: 76 AKRV 79
A RV
Sbjct: 138 ADRV 141
>gi|317968520|ref|ZP_07969910.1| RNA recognition motif-containing protein [Synechococcus sp.
CB0205]
Length = 157
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
I V N+PF+A+Q +V ELF FGE+ LP + +G RGF FVE + R
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVANCSLPLER-DTGRKRGFAFVELVDPESEDRA 58
>gi|146413741|ref|XP_001482841.1| hypothetical protein PGUG_04796 [Meyerozyma guilliermondii ATCC
6260]
Length = 713
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
KQ + VRNIP+ A Q ++E F FG++K+ LP +GL RG FV F+++
Sbjct: 296 KQEPYAVFVRNIPYDADQDSLKEHFSQFGDVKYA-LPVIDKETGLARGSAFVAFVSE 351
>gi|328768982|gb|EGF79027.1| hypothetical protein BATDEDRAFT_12759 [Batrachochytrium
dendrobatidis JAM81]
Length = 820
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+++++RN+ F K ++ +F AFG +K +P + G RGFGFVEF T + A+R
Sbjct: 175 ARLIIRNLSFNCKPENLQNVFSAFGIVKDCSVPH--LDDGKARGFGFVEFETMDCAQRA 231
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S + V +PF AK ++EE F G ++ + K+ + +GL G G+V F +A+R
Sbjct: 67 STLFVSTLPFTAKADDLEEFFSQIGPVRSCFIAKQKL-TGLSSGCGYVHFALAEDAQRA 124
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ + +RN+ F+ + E+ F FG+L++ ++ SGL RG GFV F
Sbjct: 336 DTTLFIRNLSFETTEKELYNAFSTFGKLRYAKITMDKT-SGLSRGTGFVCF 385
>gi|321475411|gb|EFX86374.1| hypothetical protein DAPPUDRAFT_98025 [Daphnia pulex]
Length = 335
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 78
G+ + V IP QSE+E LF FG + R+ + +GL +G GF+ F T+ EA+R
Sbjct: 75 GANLYVSGIPKTMCQSELETLFAPFGRIITSRILCDSITAGLSKGVGFIRFDTRGEAER 133
>gi|32352198|dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica Group]
Length = 232
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+Q +LVRNIP + ++ F+ FG ++ V LPK SG RGF FVEF+ +A
Sbjct: 2 EQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYY-SGEPRGFAFVEFVDPYDA 60
>gi|388511807|gb|AFK43965.1| unknown [Lotus japonicus]
Length = 191
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
A++ G KI V ++P +A ++ + F FG + V +P+ SG HRGFGFV F
Sbjct: 50 AREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAKRSG-HRGFGFVTFAEDGV 108
Query: 76 AKRV 79
A RV
Sbjct: 109 ADRV 112
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +++++ +F+ FGEL+FV+L K +G RG+GFV+F N+A+
Sbjct: 278 RLYVGNIHFSITENDLQNVFEPFGELEFVQLQKDE--TGRSRGYGFVQFRDPNQAR 331
>gi|224112763|ref|XP_002316285.1| predicted protein [Populus trichocarpa]
gi|222865325|gb|EEF02456.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
Q +LVRNIP + E+ F+ FG ++ V +PK +G RGF FV+F+ EA
Sbjct: 2 DQNSGSLLVRNIPLDCRPDELRGPFERFGVVRDVYIPKDYY-TGEPRGFAFVQFVDPYEA 60
>gi|353245170|emb|CCA76234.1| related to Nucleolar protein NOP4 [Piriformospora indica DSM 11827]
Length = 850
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
A + G+ + +RN+P++A + E+ +L + FG L++VR+ SG +G F + K +
Sbjct: 371 APEAGTTLFIRNVPWEATEDEMRQLLRGFGPLRYVRIVIDQ-ESGRSKGTAFACYWNKED 429
Query: 76 AKRV 79
A +V
Sbjct: 430 ADKV 433
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH-------RGFGFVEFITK 73
S+++VRN+P+ S++ LF G + + +P V G H +GF FV +++
Sbjct: 225 SRLIVRNLPWDTTDSDLRALFLPHGAVYSIEIPTDKV-DGQHEGRKPKAKGFAFVWMLSR 283
Query: 74 NEAKRV 79
+A++
Sbjct: 284 ADAEKA 289
>gi|225427688|ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
Length = 972
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
K++VRN+PF+AK +E++++F + G + +P+ +GL RGF FV+F +K +A+
Sbjct: 283 KLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNS-ETGLSRGFAFVKFTSKQDAE 337
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S + V N P+ S++EE F G ++ + + GS HRGFGFV+F K +A R
Sbjct: 19 STVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQK-GSTEHRGFGFVQFAVKEDANRA 76
>gi|297744765|emb|CBI38027.3| unnamed protein product [Vitis vinifera]
Length = 918
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
K++VRN+PF+AK +E++++F + G + +P+ +GL RGF FV+F +K +A+
Sbjct: 264 KLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNS-ETGLSRGFAFVKFTSKQDAE 318
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S + V N P+ S++EE F G ++ + + GS HRGFGFV+F K +A R
Sbjct: 19 STVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQK-GSTEHRGFGFVQFAVKEDANRA 76
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
EATT SN + ++ V NI F +++++ +F+ FGEL+FV+L K+ G R
Sbjct: 264 EATT-----SNPNQIPFHRLYVGNIHFSITEADLQNVFEPFGELEFVQLQKEE--QGRSR 316
Query: 64 GFGFVEFITKNEAK 77
G+GFV+F N+A+
Sbjct: 317 GYGFVQFRDPNQAR 330
>gi|358365933|dbj|GAA82554.1| ribosome biogenesis [Aspergillus kawachii IFO 4308]
Length = 721
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGL 61
+EA K+K + K++VRN+P+ K+ E + LF++FG++K+V LPKK GS L
Sbjct: 132 AEALEQKKKREDQRAAAQPKLIVRNLPWSIKEPEDLAVLFRSFGKVKYVTLPKK--GSQL 189
Query: 62 HRGFGFV 68
GFGFV
Sbjct: 190 A-GFGFV 195
>gi|134076092|emb|CAK39451.1| unnamed protein product [Aspergillus niger]
Length = 1132
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R+ G +I V N+ ++A + +VEELF FG ++ VR+P+K+ G +GF +V
Sbjct: 820 RRQDRQGPMYEGREIHVSNLDWKASEQDVEELFLRFGTVELVRIPRKVDGGS--KGFCYV 877
Query: 69 EFITKNEAK 77
F +K EA+
Sbjct: 878 VFSSKEEAE 886
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+GS + V N P A + + +LF+ GE+ +R P + HR F +V+F T EA
Sbjct: 739 SGSTVFVTNFPATADEQYIRDLFREHGEIIDIRFPSLKYNT--HRRFCYVQFKTAGEA 794
>gi|384247652|gb|EIE21138.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 107
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
M S A + KR + + + VRN+P + +++LF++FG L+ RL K+ SG
Sbjct: 1 MDSRARSAKRDCN-----VHANLYVRNLPKDLDEGTLQQLFQSFGPLESCRLVKE-ASSG 54
Query: 61 LHRGFGFVEFITKNEAK 77
+ RG+GFV F + + A+
Sbjct: 55 ISRGYGFVRFSSVSAAE 71
>gi|448122956|ref|XP_004204573.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|448125223|ref|XP_004205131.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|358249764|emb|CCE72830.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|358350112|emb|CCE73391.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
Length = 841
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 27 NIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
N+PF+ + ++ ELF AFG++K R+PKK S RGF FVEF EA+
Sbjct: 720 NLPFETTRKDIVELFGAFGQIKSARVPKKFDRSA--RGFAFVEFNLLKEAE 768
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 9 KRKSSNVAKQTGSK-------ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
+ ++ N AK G + + + NI F A +S V+ELF +G ++ +RLP SG
Sbjct: 325 RERADNRAKSFGDQTSPESDTLFIGNISFSADESMVQELFSKYGSIQGIRLPTDPE-SGR 383
Query: 62 HRGFGFVEFITKNEAK 77
+GFG+V+F + +EA+
Sbjct: 384 PKGFGYVQFSSVDEAR 399
>gi|443690134|gb|ELT92349.1| hypothetical protein CAPTEDRAFT_169706 [Capitella teleta]
Length = 383
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
G+ + VRNIP Q+E+EE+F GE+ R+ VGSG +G GF+ F T+++A+
Sbjct: 145 GANLYVRNIPRTMTQNELEEIFSPHGEIIQSRILTD-VGSGQSKGVGFILFNTRDQAE 201
>gi|298714006|emb|CBJ27238.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1076
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
G I VRN+ F + Q EV+E F FG+++ L K +G+ RG FV++ +++A R
Sbjct: 557 GCTIFVRNVAFDSSQEEVKERFSEFGDVRLALLVKDRA-TGMPRGTAFVKYSKRDDADRC 615
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 15/81 (18%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLP---------------KKMVG 58
+V Q +++VRN+ F AK+ ++ E F FG L V +P ++ V
Sbjct: 356 DVRLQKQQRLIVRNLNFHAKEEDLAEAFSEFGPLSEVHIPTVKVTSRRRVKGTDEQESVT 415
Query: 59 SGLHRGFGFVEFITKNEAKRV 79
RGFGFV+F+ +A RV
Sbjct: 416 ENRSRGFGFVQFLCPKDAARV 436
>gi|378755700|gb|EHY65726.1| hypothetical protein NERG_01333 [Nematocida sp. 1 ERTm2]
Length = 316
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
I ++ + F A + E++ELF FGE+ VR+P+ G G +GFG+VEF +K
Sbjct: 93 IFIKGLNFSATEDELKELFGQFGEIVEVRIPRSRDGPG-GKGFGYVEFESK 142
>gi|331248326|ref|XP_003336787.1| hypothetical protein PGTG_18355 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309315777|gb|EFP92368.1| hypothetical protein PGTG_18355 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1066
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL---PKKMVGSGLHRGFGFVEFITK 73
K+ G+ + VRN+ F+A + E+ LF+ FG L++ R+ PK G RG GFV K
Sbjct: 516 KEQGTTLFVRNLSFEATEQELHTLFRPFGPLRYARIVMDPK----LGRSRGTGFVCLWNK 571
Query: 74 NEAKRV 79
+A++V
Sbjct: 572 EDAEKV 577
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH---RGFGFVEFITKNEA 76
G ++++RN+ F + ++ LF FG L + +P +V RGF FV + + +A
Sbjct: 315 GGRLIIRNLQFDITEQDLRFLFAPFGPLHSIDIPTTVVEGKPKPRGRGFAFVWMLNEADA 374
Query: 77 KRV 79
R
Sbjct: 375 GRA 377
>gi|126137878|ref|XP_001385462.1| RNA recognition motif-containing protein [Scheffersomyces stipitis
CBS 6054]
gi|126092740|gb|ABN67433.1| RNA recognition motif-containing protein [Scheffersomyces stipitis
CBS 6054]
Length = 694
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
RK +N +Q I VRNIP+ A + +EE F FG +K+ LP +GL RG FV
Sbjct: 295 RKKNN--RQEPYAIFVRNIPYDADEDSLEEHFSKFGPVKYA-LPVIDKETGLARGSAFVA 351
Query: 70 FITKN 74
F+ ++
Sbjct: 352 FVNED 356
>gi|399218473|emb|CCF75360.1| unnamed protein product [Babesia microti strain RI]
Length = 518
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+I V IPF+A ++E FK FGE++ PK+ + L++GFGF+ F
Sbjct: 123 RIFVTRIPFEATSDDIENYFKQFGEVEDAYCPKQPGKAHLNKGFGFISF 171
>gi|339238293|ref|XP_003380701.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
gi|316976387|gb|EFV59689.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
Length = 1241
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 78
+K+ V+NIP A ++EVE LF+ +G+L+ VRL + SG +G +VEF + A+R
Sbjct: 790 NKLFVKNIPTFATENEVETLFRQYGDLRSVRL--VLHKSGRSKGLAYVEFDNEEAAER 845
>gi|168056094|ref|XP_001780057.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668555|gb|EDQ55160.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ + +LVRNIP ++ F+ +G +K V LP+ +GL RGFGFV+F+ +A
Sbjct: 53 EPPTSLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYY-TGLPRGFGFVQFLEPRDA 110
>gi|156395700|ref|XP_001637248.1| predicted protein [Nematostella vectensis]
gi|156224359|gb|EDO45185.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
++I V + FQ E+ ELF+++G ++ V++ + G G+ RG+GFV F ++AK+V
Sbjct: 10 NRIFVGGVAFQTTAIELRELFESYGAVRDVKIARD--GEGVSRGYGFVTFFRDDDAKKV 66
>gi|325189852|emb|CCA24334.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 938
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 15 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK---KMVGSGLHRGFGFVEFI 71
V + + I VRN+PFQ EVE+LF G +K V L K K L RGF FV F
Sbjct: 2 VDSSSKTTIFVRNLPFQITSKEVEDLFSQVGPVKKVDLIKNKGKSKDDTLTRGFAFVRFA 61
Query: 72 TKNEA 76
+++A
Sbjct: 62 LESDA 66
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 16/70 (22%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFG---ELKFVRLPKKMV---------GS----G 60
K+ G +++VRN+ FQA ++ +F FG E VRLP + GS G
Sbjct: 264 KKDGLRLIVRNLSFQATDEDLHRVFSPFGAVSEAHVVRLPVDTIAVSDNDDKEGSVSILG 323
Query: 61 LHRGFGFVEF 70
RGFGFV+F
Sbjct: 324 RSRGFGFVQF 333
>gi|239938030|gb|ACS36114.1| RNA-binding protein Elav2 [Capitella teleta]
Length = 341
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
G+ + VRNIP Q+E+EE+F GE+ R+ VGSG +G GF+ F T+++A+
Sbjct: 103 GANLYVRNIPRTMTQNELEEIFSPHGEIIQSRILTD-VGSGQSKGVGFILFNTRDQAE 159
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K G RG+GFV+F N+A+
Sbjct: 269 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDETGRS--RGYGFVQFRDPNQAR 322
>gi|224102541|ref|XP_002312718.1| predicted protein [Populus trichocarpa]
gi|222852538|gb|EEE90085.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S +L+RN+P A+ ++ F+ FG LK + LPK +G RGFGFV++ +A
Sbjct: 40 SGLLIRNLPLDARPEDLRRSFEKFGPLKDIYLPKNYY-TGEPRGFGFVKYRHSEDA 94
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +++++ +F+ FGEL+FV+L K SG RG+GFV+F ++A+
Sbjct: 293 RLYVGNIHFSITETDLQNVFEPFGELEFVQLQKD--DSGRSRGYGFVQFRDASQAR 346
>gi|322711864|gb|EFZ03437.1| RNA recognition motif containing protein [Metarhizium anisopliae
ARSEF 23]
Length = 731
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGF 65
TV ++ Q K++VRN+P+ K SE + LF+++G++KF LP+ G RGF
Sbjct: 132 TVPKRPGREESQRPPKLIVRNLPWSIKTSEQLSNLFRSYGKVKFSDLPQ---SKGKLRGF 188
Query: 66 GFVEFITKNEAKRV 79
GFV K A++
Sbjct: 189 GFVTIRGKKNAEKA 202
>gi|19113513|ref|NP_596721.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74698432|sp|Q9USY2.1|YOW4_SCHPO RecName: Full=Uncharacterized RNA-binding protein C1861.04c
gi|5734577|emb|CAB52740.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe]
Length = 1014
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
++R + A G ++ V NI F+ + +VE F+ +G+++ VR+PK+ H+GFG+
Sbjct: 744 LRRTPRSGAVYEGRELYVTNIDFKVNEKDVETFFRDYGQVESVRIPKRF---NQHKGFGY 800
Query: 68 VEFITKNEAK 77
V T +A+
Sbjct: 801 VVMTTNQDAE 810
>gi|149244924|ref|XP_001527005.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449399|gb|EDK43655.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 795
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 72
KQ I VRNIP+ A +S ++E F++FG +K+ LP +GL RG FV F T
Sbjct: 356 KQEAFSIFVRNIPYDADESSLKEHFESFGPVKYA-LPVIDKETGLARGSAFVAFKT 410
>gi|67469511|ref|XP_650734.1| enhancer binding protein 2 (EBP2) [Entamoeba histolytica
HM-1:IMSS]
gi|56467386|gb|EAL45348.1| enhancer binding protein 2 (EBP2), putative [Entamoeba
histolytica HM-1:IMSS]
gi|449703121|gb|EMD43626.1| enhancer binding protein (EBP2), putative [Entamoeba histolytica
KU27]
Length = 219
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+KI V N+ FQ KQ ++E+ F FG K L MV G +GFGFVE+ T+ E +
Sbjct: 2 TKIYVSNLSFQTKQEDMEKYFAVFGRFKSCIL---MVHRGRSKGFGFVEYETEEETNKA 57
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ + N+ F A + +V F + GE++ VRLP M SG +GFG+V F + + AK+
Sbjct: 312 VFIGNLSFNATEDDVRNAFSSCGEIQSVRLPTDM-NSGRPKGFGYVTFDSIDAAKQC 367
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ V NIPF A + V ELF G + +RLP SG +GFG+V+F + +EA++
Sbjct: 397 LFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPE-SGRPKGFGYVQFSSVDEARQA 452
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+K+ A + + V N+ + + + + F+ FGEL VR+ SG RGFG+VE
Sbjct: 275 KKTDEEASGASANLFVGNLSWNVDEEWLRQEFETFGELSGVRIVTDR-DSGRSRGFGYVE 333
Query: 70 FIT 72
+++
Sbjct: 334 YVS 336
>gi|284929607|ref|YP_003422129.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
gi|284810051|gb|ADB95748.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
Length = 81
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
I V N+ F+A +++V +FK +GE+K V LP +G RGFGFVE T+N+
Sbjct: 3 IYVGNLSFEATEADVTNVFKEYGEVKKVYLPSDR-ETGKMRGFGFVEMETENQ 54
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++E+F+ FGEL+ V L + + G +G+GFV+F+ + AK
Sbjct: 279 RLYVGNIHFSVTEKDLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDPSHAK 334
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++E+F+ FGEL+ V L + + G +G+GFV+F+ + AK
Sbjct: 276 RLYVGNIHFSVTEKDLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDPSHAK 331
>gi|85000983|ref|XP_955210.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65303356|emb|CAI75734.1| RNA-binding protein, putative [Theileria annulata]
Length = 406
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+ S + K ++I + I F+A + ++E+ FK FG + PK+ SGL++GFGF+
Sbjct: 101 KSSVDDEKINANRIFITRIAFEATKDDLEDYFKKFGTVYDAYCPKQNNYSGLNKGFGFIS 160
Query: 70 FITKNEAKRV 79
F + K+V
Sbjct: 161 FENEESIKKV 170
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ V N+PF A + V+ELF G + +RLP SG +GFG+V+F + +EA+
Sbjct: 371 LFVGNLPFSANEDSVQELFGEKGSIVGIRLPTD-PDSGRPKGFGYVQFASVDEAR 424
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 4 EATTVKRKSSNVAKQTGS--KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
E+ + +KS ++TG+ + + N+ + + + + F+ FGEL VR+ SG
Sbjct: 241 ESASTPKKSKQAEEETGASANLFIGNLSWNVDEDWLRQEFETFGELSGVRIVTDR-DSGR 299
Query: 62 HRGFGFVEFIT 72
RGFG+VE+++
Sbjct: 300 SRGFGYVEYVS 310
>gi|452987674|gb|EME87429.1| hypothetical protein MYCFIDRAFT_201120 [Pseudocercospora fijiensis
CIRAD86]
Length = 739
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLH 62
E+ K+K SK++VRN+P+ K SE + LF+++G++K +PKK G GL
Sbjct: 119 ESVPQKKKEQERQPSQPSKLIVRNLPWSIKGSEQLTRLFQSYGKVKQAYVPKK--GPGLM 176
Query: 63 RGFGFV 68
GFGFV
Sbjct: 177 AGFGFV 182
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ +RN+PF ++E+ F+ FG ++ R+ G+ +G GFV F K +A
Sbjct: 301 LFIRNLPFTCTDEDLEDHFQQFGSTRYARVVMDY-GTERSKGTGFVCFYNKEDA 353
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
SSN + ++ V NI F +S+++ +F+ FGEL+FV+L K+ G RG+GFV+F
Sbjct: 282 SSNPNQIPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKEE--QGRSRGYGFVQFR 339
Query: 72 TKNEAK 77
++A+
Sbjct: 340 DPSQAR 345
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +++++ +F+ FGEL+FV+L K SG RG+GFV+F +A+
Sbjct: 288 RLYVGNIHFSITETDLQNVFEPFGELEFVQLQKD--DSGRSRGYGFVQFRDAGQAR 341
>gi|224098431|ref|XP_002311171.1| predicted protein [Populus trichocarpa]
gi|222850991|gb|EEE88538.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
Q +LVRNIP + E+ +F+ FG ++ V +PK +G RGFGFV+F+ ++A
Sbjct: 41 QDSGSLLVRNIPRDCRPEELRGMFERFGVVRDVYIPKDY-HTGEPRGFGFVQFVEPSDA 98
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +++++ +F+ FGEL+FV+L K SG RG+GFV+F +A+
Sbjct: 282 RLYVGNIHFSITETDLQNVFEPFGELEFVQLQKD--DSGRSRGYGFVQFRDAGQAR 335
>gi|193586991|ref|XP_001951686.1| PREDICTED: RNA-binding protein 28-like [Acyrthosiphon pisum]
Length = 625
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
K K+S ++++RN+PF + +++E F FGE+ ++L +K G + G GFV
Sbjct: 9 KNKASKCPNNRRGRLIIRNLPFTTDEEQLKEHFSKFGEINDIKLLRKPDGKLI--GCGFV 66
Query: 69 EFITKNEA 76
+FI K A
Sbjct: 67 QFIVKQNA 74
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ V NIPF A + V ELF G + +RLP SG +GFG+V+F + +EA++
Sbjct: 410 LFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPE-SGRPKGFGYVQFSSVDEARQA 465
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+K+ A + + V N+ + + + + F++FGEL VR+ SG RGFG+VE
Sbjct: 291 KKTDEEASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDR-DSGRSRGFGYVE 349
Query: 70 FI 71
++
Sbjct: 350 YV 351
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ V NIPF A + V ELF G + +RLP SG +GFG+V+F + +EA++
Sbjct: 410 LFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPE-SGRPKGFGYVQFSSVDEARQA 465
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+K+ A + + V N+ + + + + F++FGEL VR+ SG RGFG+VE
Sbjct: 291 KKTDEEASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDR-DSGRSRGFGYVE 349
Query: 70 FI 71
++
Sbjct: 350 YV 351
>gi|383855732|ref|XP_003703364.1| PREDICTED: RNA-binding protein 28-like [Megachile rotundata]
Length = 747
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
++ NV + +I+VRN+PF+A + +V + ++ FG++ + PK+ G+ L G F++F
Sbjct: 33 RNDNVTEDKTPRIIVRNVPFKATEEDVRKFYEPFGQIVEINFPKRPDGAPL--GCCFIQF 90
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 6 TTVKRKSSNVAKQTGSK----ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
T +KR+ + K K I+VRN+ FQ + +++ F +GE++ V++ K+ G +
Sbjct: 170 TQIKRERRKLLKDKNRKKRARIIVRNLAFQVTEENLKDHFSQYGEIEEVKILKRSDGKNV 229
Query: 62 HRGFGFVEF 70
G F++F
Sbjct: 230 --GCAFLQF 236
>gi|318042980|ref|ZP_07974936.1| RNA recognition motif-containing protein [Synechococcus sp.
CB0101]
Length = 176
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
I V N+PF+A+Q +V ELF FGE+ LP + +G RGF FVE ++ R
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVTNCFLPLER-DTGRKRGFAFVELADEDSESRA 58
>gi|302686980|ref|XP_003033170.1| hypothetical protein SCHCODRAFT_67149 [Schizophyllum commune H4-8]
gi|300106864|gb|EFI98267.1| hypothetical protein SCHCODRAFT_67149 [Schizophyllum commune H4-8]
Length = 952
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
G+ + +RN+P+ A + E+ LF+AFG L++ R+ K +G RG GF + K +A +V
Sbjct: 440 GTTLFIRNVPYDATEDELRTLFRAFGPLRYARITKD-PETGRGRGTGFACYWNKEDADKV 498
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG---- 58
S+A S++ A S+++VRN+PF + ++ +F +G + + +P
Sbjct: 247 SDAKDKPSASTSTAPSHASRLIVRNLPFDITEQDLRAIFLPYGPIYSITIPSASAPTTGE 306
Query: 59 ------SGLHRGFGFVEFITKNEAKR 78
+ +GF FV ++K +A+R
Sbjct: 307 DADGRRTSGKKGFAFVWMMSKKDAER 332
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL+FV+L K G RG+GFV+F N+A+
Sbjct: 281 RLYVGNIHFSITESDLQNVFEPFGELEFVQLQKDETGRS--RGYGFVQFRDPNQAR 334
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL+FV+L K G RG+GFV+F N+A+
Sbjct: 280 RLYVGNIHFSITESDLQNVFEPFGELEFVQLQKDETGRS--RGYGFVQFRDPNQAR 333
>gi|338214373|ref|YP_004658434.1| RNP-1 like RNA-binding protein [Runella slithyformis DSM 19594]
gi|336308200|gb|AEI51302.1| RNP-1 like RNA-binding protein [Runella slithyformis DSM 19594]
Length = 127
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 78
I V N+PF+A E+ ELF+ FGE+ R+ +G RGF FVE +EAK+
Sbjct: 3 IYVANVPFKANDDELRELFEEFGEVSSARIIMDKF-TGKSRGFAFVEMPNDDEAKQ 57
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL FV+L ++ G +G+GFV+F N+A+
Sbjct: 303 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRS--KGYGFVQFRDPNQAR 356
>gi|116782736|gb|ABK22635.1| unknown [Picea sitchensis]
Length = 275
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ + +LVRNIP + E+ F+ FG LK V LPK +G RGFGFV+F+ +A
Sbjct: 33 EPNTSLLVRNIPRDCRSDELRMPFERFGPLKDVYLPKDFY-TGEPRGFGFVQFMDPQDA 90
>gi|218437654|ref|YP_002375983.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218170382|gb|ACK69115.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 110
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
I V NIP+Q Q +++E+F +G +K V+LP SG RGF FV+ T+++
Sbjct: 3 IYVGNIPYQVTQDDIKEVFGEYGTVKQVKLPVDRE-SGRVRGFAFVDLDTEDQ 54
>gi|67624203|ref|XP_668384.1| RNA-binding protein SiahBP [Cryptosporidium hominis TU502]
gi|54659576|gb|EAL38146.1| RNA-binding protein SiahBP [Cryptosporidium hominis]
Length = 615
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 38/65 (58%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 72
+ +A + ++I + ++P+ ++ +FK FG + +L + G HRG+GF+EF T
Sbjct: 338 TGIATHSQNRIYIGSVPYSFTTDDLRHIFKTFGVILSCQLIPSIEKPGTHRGYGFIEFGT 397
Query: 73 KNEAK 77
++AK
Sbjct: 398 ADQAK 402
>gi|159112569|ref|XP_001706513.1| Polyadenylate-binding protein, putative [Giardia lamblia ATCC
50803]
gi|157434610|gb|EDO78839.1| Polyadenylate-binding protein, putative [Giardia lamblia ATCC
50803]
Length = 663
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+K++++N+ FQA E+++L FG + R PKK+ G RGF FV++ T+ EA+
Sbjct: 566 TKLIIKNLAFQANGKELKQLVSQFGRVVSFRAPKKL--DGRLRGFAFVQYATEKEAE 620
>gi|294933970|ref|XP_002780926.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239891073|gb|EER12721.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 235
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
R + A+ ++VRN+ + V LF +GE++ V LP SG RGFGFVE
Sbjct: 57 RDDAADAEGESCSLIVRNLNYDTSPQHVRSLFSRYGEIRDVYLPLDY-NSGRPRGFGFVE 115
Query: 70 FITKNE 75
F +
Sbjct: 116 FCDPRD 121
>gi|408391758|gb|EKJ71126.1| hypothetical protein FPSE_08632 [Fusarium pseudograminearum CS3096]
Length = 770
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 18 QTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
Q +K+++RN+P+ K++E +E LF+++G++KF LP+ G +GFGFV + A
Sbjct: 141 QRPNKLIIRNLPWSIKKAEQLEHLFRSYGKVKFADLPQT---KGKLKGFGFVTLRGRPNA 197
Query: 77 KRV 79
+R
Sbjct: 198 ERA 200
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S + VRN+PF +++ F FG++++ R+ V + G GFV FI +EAK
Sbjct: 339 STVFVRNLPFTTTDEQLKGFFGHFGKIRYARVVMDKV-TEKPAGTGFVCFIDADEAK 394
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL FV+L ++ G +G+GFV+F N+A+
Sbjct: 297 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRS--KGYGFVQFRDPNQAR 350
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL FV+L ++ +G +G+GFV+F N+A+
Sbjct: 300 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQREE--TGRSKGYGFVQFRDPNQAR 353
>gi|302664299|ref|XP_003023781.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
gi|291187796|gb|EFE43163.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
Length = 592
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL FV+L ++ G +G+GFV+F N+A+
Sbjct: 300 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRS--KGYGFVQFRDPNQAR 353
>gi|46111259|ref|XP_382687.1| hypothetical protein FG02511.1 [Gibberella zeae PH-1]
Length = 767
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 18 QTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
Q +K+++RN+P+ K++E +E LF+++G++KF LP+ G +GFGFV + A
Sbjct: 141 QRPNKLIIRNLPWSIKKAEQLEHLFRSYGKVKFADLPQT---KGKLKGFGFVTLRGRPNA 197
Query: 77 KRV 79
+R
Sbjct: 198 ERA 200
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S + VRN+PF +++ F FG++++ R+ V + G GFV FI +EAK
Sbjct: 342 STVFVRNLPFTTTDEQLKGFFGHFGKIRYARVVMDKV-TEKPAGTGFVCFIDADEAK 397
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL FV+L ++ G +G+GFV+F N+A+
Sbjct: 302 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRS--KGYGFVQFRDPNQAR 355
>gi|168042691|ref|XP_001773821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674936|gb|EDQ61438.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 345
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
I P+ EVE FK +G++K VRLPK + GF VEF ++ EAK++
Sbjct: 120 IAANPFPYTITMEEVETFFKQYGQVKSVRLPKHASSKNVLSGFAVVEFSSEEEAKKI 176
>gi|342878966|gb|EGU80243.1| hypothetical protein FOXB_09170 [Fusarium oxysporum Fo5176]
Length = 1079
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+K+ A G +I + N+ A +++++E+F +G + V LP+ +VG +GF F++
Sbjct: 757 KKAREGALAEGREIHISNLDRTATEADLKEVFSKYGNVTRVNLPRNLVGKT--KGFAFID 814
Query: 70 FITKNEAKR 78
F TK EA++
Sbjct: 815 FATKEEAEK 823
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ + NI F A ++ V+ELF +G ++ +RLP SG +GFG+V+F + +EA+
Sbjct: 346 LFIGNISFSADENMVQELFSKYGTIQGIRLPTDP-DSGRPKGFGYVQFSSVDEAR 399
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 4 EATTVKRKSS-NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
EA V +K+ +V + + + V N+ + + + F+ FGEL R+ SG
Sbjct: 220 EAEPVAKKAKVDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRE-SGRS 278
Query: 63 RGFGFVEFITKNEA 76
RGFG+VEF+ +A
Sbjct: 279 RGFGYVEFVNVEDA 292
>gi|260788540|ref|XP_002589307.1| hypothetical protein BRAFLDRAFT_97371 [Branchiostoma floridae]
gi|229274484|gb|EEN45318.1| hypothetical protein BRAFLDRAFT_97371 [Branchiostoma floridae]
Length = 466
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 9/73 (12%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRL---PKKMVGSGLHRGFG 66
R+S++V Q G + +RN+ + + + +VEELF FG +K+VRL P+ + RG G
Sbjct: 17 RESTDV--QQGKTVFIRNLSYDSLEEDVEELFLQFGGIKYVRLVVDPQ----TEHSRGTG 70
Query: 67 FVEFITKNEAKRV 79
FV+F +K A +
Sbjct: 71 FVQFNSKEAADKC 83
>gi|71027799|ref|XP_763543.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350496|gb|EAN31260.1| nucleic acid binding factor, putative [Theileria parva]
Length = 421
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 41/70 (58%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+ S + K ++I + I F+A + ++E+ FK FG + P++ SGL++GFGF+
Sbjct: 107 KSSLDDEKINANRIFITRIAFEATKDDLEDYFKKFGTVYDAYCPRQNNYSGLNKGFGFIS 166
Query: 70 FITKNEAKRV 79
F ++ ++V
Sbjct: 167 FENEDSIRKV 176
>gi|67537390|ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|40741753|gb|EAA60943.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|259482272|tpe|CBF76595.1| TPA: nucleolin protein Nsr1, putative (AFU_orthologue;
AFUA_3G07710) [Aspergillus nidulans FGSC A4]
Length = 524
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ V N+PF A + V E+F G + +RLP M SG +GFG+V++ + +EA++
Sbjct: 386 LFVGNLPFSANEDSVHEVFGPQGNVLGIRLPTDME-SGRPKGFGYVQYSSVDEARKA 441
>gi|66362264|ref|XP_628096.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|46227417|gb|EAK88352.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|323508937|dbj|BAJ77361.1| cgd1_2730 [Cryptosporidium parvum]
gi|323510323|dbj|BAJ78055.1| cgd1_2730 [Cryptosporidium parvum]
Length = 693
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 38/65 (58%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 72
+ +A + ++I + ++P+ ++ +FK FG + +L + G HRG+GF+EF T
Sbjct: 416 TGIATHSQNRIYIGSVPYSFTTDDLRHIFKTFGVILSCQLIPSIEKPGTHRGYGFIEFGT 475
Query: 73 KNEAK 77
++AK
Sbjct: 476 ADQAK 480
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ + NI F A ++ V+ELF +G ++ +RLP SG +GFG+V+F + +EA+
Sbjct: 346 LFIGNISFSADENMVQELFSKYGTIQGIRLPTDP-DSGRPKGFGYVQFSSVDEAR 399
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 4 EATTVKRKSS-NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
EA V +K+ +V + + + V N+ + + + F+ FGEL R+ SG
Sbjct: 220 EAEPVAKKAKVDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRE-SGRS 278
Query: 63 RGFGFVEFITKNEA 76
RGFG+VEF+ +A
Sbjct: 279 RGFGYVEFVNVEDA 292
>gi|449524006|ref|XP_004169014.1| PREDICTED: uncharacterized protein LOC101227075 [Cucumis sativus]
Length = 305
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+Q +LVRNIP + E+ F+ FG ++ V +PK +G RGF FVEF+ EA
Sbjct: 49 EQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYY-TGEPRGFAFVEFVDPYEA 107
>gi|348671618|gb|EGZ11439.1| hypothetical protein PHYSODRAFT_435859 [Phytophthora sojae]
Length = 92
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 25 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
V N+PFQ E+ +LF FGE+ V +P+ GS RGF FV F+ K +A+
Sbjct: 11 VDNVPFQIGSDELRDLFSKFGEIGDVYIPRAR-GSNESRGFAFVRFMEKRDAE 62
>gi|326471726|gb|EGD95735.1| RNA splicing factor [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL FV+L ++ G +G+GFV+F N+A+
Sbjct: 300 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRS--KGYGFVQFRDPNQAR 353
>gi|19173378|ref|NP_597181.1| POLYADENYLATE BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1]
gi|449328776|gb|AGE95052.1| polyadenylate binding protein 2 [Encephalitozoon cuniculi]
Length = 432
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KR + Q +K+L+RN+PFQA + E+ ++F +F + VR+P K GS RGF FV
Sbjct: 343 KRPPEEASGQLMNKLLIRNVPFQASKEEIRKIFGSFHVVD-VRIPVKREGSS--RGFCFV 399
Query: 69 EFITKNE 75
+ ++
Sbjct: 400 TLNSPDD 406
>gi|440684571|ref|YP_007159366.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
gi|428681690|gb|AFZ60456.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
Length = 604
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 14 NVAKQTGS-------KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
+ AK +GS KI + N+ F A + ++E LF FGE+ V LPK + +G RGF
Sbjct: 511 DTAKVSGSNDTSDYAKIFIGNVDFNADEQDLETLFSQFGEISDVYLPKDRM-TGKSRGFA 569
Query: 67 FVEFITKNEAKR 78
VEF AK+
Sbjct: 570 IVEFEQLESAKK 581
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL FV+L ++ G +G+GFV+F N+A+
Sbjct: 268 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRS--KGYGFVQFRDPNQAR 321
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 72
+ V N+PF A Q V E+F +G++ VRLP + +GFG+VEF T
Sbjct: 461 LFVGNLPFSATQDSVWEIFAEYGDVNSVRLPTDPETQRV-KGFGYVEFAT 509
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K SG RG+GFV+F +A+
Sbjct: 274 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD--DSGRSRGYGFVQFRDATQAR 327
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9808]
Length = 97
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
I V N+PF+ Q +V E+FK +G++K V LP +G RGF FVE T E
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRE-TGKKRGFAFVEMETPEE 54
>gi|392512799|emb|CAD26357.2| POLYADENYLATE BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1]
Length = 413
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KR + Q +K+L+RN+PFQA + E+ ++F +F + VR+P K GS RGF FV
Sbjct: 324 KRPPEEASGQLMNKLLIRNVPFQASKEEIRKIFGSFHVVD-VRIPVKREGSS--RGFCFV 380
Query: 69 EFITKNE 75
+ ++
Sbjct: 381 TLNSPDD 387
>gi|340715217|ref|XP_003396115.1| PREDICTED: RNA-binding protein 28-like [Bombus terrestris]
Length = 769
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
N + +I+VRNIPF+ +V++L++ FGE+ + PK+ GS + G F++F
Sbjct: 34 DDNTDENKKPRIIVRNIPFKTTPEDVKKLYEPFGEILEINFPKRTDGSPV--GCCFIQF 90
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
++I++RN+ FQA + ++++ F +G ++ +R+ K+ G + G F++F
Sbjct: 197 ARIVIRNLSFQATEEDLKKHFSPYGSVEEIRILKRSDGKNI--GCAFLQF 244
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K SG RG+GFV+F +A+
Sbjct: 274 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD--DSGRSRGYGFVQFRDATQAR 327
>gi|425434339|ref|ZP_18814808.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9432]
gi|425450077|ref|ZP_18829909.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
gi|440751641|ref|ZP_20930844.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389676192|emb|CCH94745.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9432]
gi|389769258|emb|CCI05857.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
gi|440176134|gb|ELP55407.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
I V N+PF+ Q +V E+FK +G++K V LP +G RGF FVE T E
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRE-TGKKRGFAFVEMETPEE 54
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ + N+PF A Q V E F +G++ VRLP + +GFG+VEF T+ A
Sbjct: 503 LFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPETERI-KGFGYVEFATQEAA 555
>gi|12323160|gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis thaliana]
Length = 220
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
++ + +LVRN+ +Q ++ + F+ FG +K + LP+ +G RGFGFV+F+ +
Sbjct: 31 SRDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYY-TGDPRGFGFVQFMDPAD 89
Query: 76 A 76
A
Sbjct: 90 A 90
>gi|342884659|gb|EGU84864.1| hypothetical protein FOXB_04645 [Fusarium oxysporum Fo5176]
Length = 736
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 18 QTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
Q K++VRN+P+ K SE + LF++FG++KF LP+ G +GFGFV + A
Sbjct: 142 QRPPKLIVRNLPWSIKTSEQLSHLFRSFGKVKFADLPQ---DKGKLKGFGFVTLRGRPNA 198
Query: 77 KRV 79
+R
Sbjct: 199 ERA 201
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S + +RN+PF ++++ F FG++++ R+ V + G GFV F ++AK+
Sbjct: 329 STVFIRNLPFTTTDEQLKDFFDHFGKVRYARVVMDKV-TEKPAGTGFVCFYDVDDAKKC 386
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K SG RG+GFV+F +A+
Sbjct: 274 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD--DSGRSRGYGFVQFRDATQAR 327
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K+ G +G+GFV+FI +AK
Sbjct: 258 RLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEEAGRS--KGYGFVQFIDPAQAK 311
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9806]
Length = 97
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
I V N+PF+ Q +V E+FK +G++K V LP +G RGF FVE T E
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRE-TGKKRGFAFVEMETPEE 54
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++E+F+ +GEL+ V L + + G +G+GFV+F+ AK
Sbjct: 281 RLYVGNIHFSVTEKDLQEIFEPYGELEQVILQRDELNPGRSKGYGFVQFVDPTHAK 336
>gi|240254274|ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195102|gb|AEE33223.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 220
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
++ + +LVRN+ +Q ++ + F+ FG +K + LP+ +G RGFGFV+F+ +
Sbjct: 31 SRDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYY-TGDPRGFGFVQFMDPAD 89
Query: 76 A 76
A
Sbjct: 90 A 90
>gi|383936470|ref|ZP_09989895.1| RNA-binding protein [Rheinheimera nanhaiensis E407-8]
gi|383702390|dbj|GAB59986.1| RNA-binding protein [Rheinheimera nanhaiensis E407-8]
Length = 162
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
+S+ K + V N+P++A + V+ELF+ FG + VRL K +G RGFGFVE
Sbjct: 67 TSDAYKGETVTLYVGNLPYRANEDAVKELFQRFGAVVNVRLMKDR-QTGRRRGFGFVEVA 125
Query: 72 TKNEAKRV 79
K+ K +
Sbjct: 126 AKDSNKMI 133
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ + N+PF A ++ V+ELF G + +RLP SG +GFG+V+F + +EA+
Sbjct: 341 LFLGNLPFSADENAVQELFSKHGSILGIRLPTDP-DSGRPKGFGYVQFSSVDEAR 394
>gi|145256511|ref|XP_001401421.1| ribosome biogenesis (Nop4) [Aspergillus niger CBS 513.88]
gi|134058324|emb|CAK38513.1| unnamed protein product [Aspergillus niger]
Length = 722
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQ-SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
KR+ A Q K++VRN+P+ K+ ++ LF++FG++K+V LPKK GS L GFGF
Sbjct: 140 KREEQRAAAQP-PKLIVRNLPWSIKEPDDLAVLFRSFGKVKYVTLPKK--GSQLA-GFGF 195
Query: 68 V 68
V
Sbjct: 196 V 196
>gi|357160417|ref|XP_003578758.1| PREDICTED: uncharacterized protein LOC100826288 [Brachypodium
distachyon]
Length = 295
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R +Q +LVRNIP A+ ++ F+ FG ++ V LPK SG RGF FV
Sbjct: 53 RRGYGGRKEQGSGSLLVRNIPLSARAEDLRVPFERFGPVRDVYLPKDYY-SGEPRGFAFV 111
Query: 69 EFITKNEA 76
EF+ +A
Sbjct: 112 EFVDPYDA 119
>gi|116309951|emb|CAH66982.1| H0714H04.9 [Oryza sativa Indica Group]
Length = 704
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 9 KRKSSNVAKQTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
K +SN + TGSK L V N+P+ +Q +V++ F+ GE+ +R G RGFG
Sbjct: 433 KTPASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRF--STFEDGNFRGFGH 490
Query: 68 VEFITKNEAKRV 79
VEF T AK+
Sbjct: 491 VEFATAEAAKKA 502
>gi|115460618|ref|NP_001053909.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|75327488|sp|Q7XTT4.2|NUCL2_ORYSJ RecName: Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2
gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa Japonica Group]
gi|113565480|dbj|BAF15823.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|215737156|dbj|BAG96085.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 707
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 9 KRKSSNVAKQTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
K +SN + TGSK L V N+P+ +Q +V++ F+ GE+ +R G RGFG
Sbjct: 436 KTPASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRF--STFEDGNFRGFGH 493
Query: 68 VEFITKNEAKRV 79
VEF T AK+
Sbjct: 494 VEFATAEAAKKA 505
>gi|350631988|gb|EHA20356.1| hypothetical protein ASPNIDRAFT_44327 [Aspergillus niger ATCC 1015]
Length = 722
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQ-SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
KR+ A Q K++VRN+P+ K+ ++ LF++FG++K+V LPKK GS L GFGF
Sbjct: 140 KREEQRAAAQP-PKLIVRNLPWSIKEPDDLAVLFRSFGKVKYVTLPKK--GSQLA-GFGF 195
Query: 68 V 68
V
Sbjct: 196 V 196
>gi|125591671|gb|EAZ32021.1| hypothetical protein OsJ_16200 [Oryza sativa Japonica Group]
Length = 728
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 9 KRKSSNVAKQTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
K +SN + TGSK L V N+P+ +Q +V++ F+ GE+ +R G RGFG
Sbjct: 457 KTPASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRF--STFEDGNFRGFGH 514
Query: 68 VEFITKNEAKRV 79
VEF T AK+
Sbjct: 515 VEFATAEAAKKA 526
>gi|71028770|ref|XP_764028.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350982|gb|EAN31745.1| hypothetical protein, conserved [Theileria parva]
Length = 245
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K TG L+RN+ F V E F+ FG+++ V LP + RGFGFVEF K +A
Sbjct: 3 KSTGYSTLLRNLRFSTSPQVVREAFEKFGKIRDVYLPLDF-NTRRPRGFGFVEFYDKADA 61
>gi|387193280|gb|AFJ68695.1| splicing factor U2AF 65 kDa subunit [Nannochloropsis gaditana
CCMP526]
Length = 424
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
+T + +N + KI V +P+ +V EL AFG L+ L KK +G+ +G
Sbjct: 207 STGLTAPGANSVPDSPYKIFVGGLPYHVTDDQVRELLSAFGPLRGFDL-KKDPATGMSKG 265
Query: 65 FGFVEFI 71
+GF E+I
Sbjct: 266 YGFCEYI 272
>gi|448123377|ref|XP_004204677.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|448125660|ref|XP_004205235.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|358249868|emb|CCE72934.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|358350216|emb|CCE73495.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
Length = 256
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
V R S++ + + + NI +Q + + ELF FG ++ + LPK + H+G+G
Sbjct: 3 NVLRHSNDSDRNINASLYFSNIDYQVTELLLYELFIQFGPVRTLNLPKDRILK-THQGYG 61
Query: 67 FVEFITKNEAKRV 79
FVEF T +A+ V
Sbjct: 62 FVEFKTAKDAEYV 74
>gi|350397588|ref|XP_003484924.1| PREDICTED: RNA-binding protein 28-like [Bombus impatiens]
Length = 768
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
N + +I+VRNIPF+ +V++L++ FGE+ + PK+ GS + G F++F
Sbjct: 35 DNTDENKKPRIIVRNIPFKTTPEDVKKLYEPFGEILEINFPKRTDGSPV--GCCFIQF 90
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
++I++RN+ FQA + ++++ F +G ++ +R+ K+ G + G F++F
Sbjct: 196 ARIVIRNLSFQATEEDLKKHFSPYGAVEEIRILKRSDGKNI--GCAFLQF 243
>gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 309
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+LVRNIP + E+ E F+ FG ++ V +P+ SG RGF FVEF+ +A
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYY-SGQPRGFAFVEFVDAYDA 101
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ + NI F A ++ V+ELF +G ++ +RLP SG +GFG+V+F + +EA+
Sbjct: 346 LFIGNISFSADENMVQELFSKYGAIQGIRLPTDPE-SGRPKGFGYVQFSSVDEAR 399
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 4 EATTVKRKSS-NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
+A V +K+ +V + + + V N+ + + + F+ FGEL R+ SG
Sbjct: 220 DAEPVAKKAKVDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELAGTRIVTDRE-SGRS 278
Query: 63 RGFGFVEFITKNEA 76
RGFG+VEF+ +A
Sbjct: 279 RGFGYVEFVNVEDA 292
>gi|156373168|ref|XP_001629405.1| predicted protein [Nematostella vectensis]
gi|156216405|gb|EDO37342.1| predicted protein [Nematostella vectensis]
Length = 817
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ V N+PF AK+SE+EELF G +K VRL G +G+G+VE+ ++ A
Sbjct: 696 LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKP--KGYGYVEYEQESSA 747
>gi|84996673|ref|XP_953058.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65304054|emb|CAI76433.1| RNA-binding protein, putative [Theileria annulata]
Length = 245
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K TG L+RN+ F V E F+ FG+++ V LP + RGFGFVEF K +A
Sbjct: 3 KSTGYSTLLRNLRFSTSPQVVREAFEKFGKIRDVYLPLDF-NTRRPRGFGFVEFYDKADA 61
>gi|125549781|gb|EAY95603.1| hypothetical protein OsI_17455 [Oryza sativa Indica Group]
Length = 667
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 9 KRKSSNVAKQTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
K +SN + TGSK L V N+P+ +Q +V++ F+ GE+ +R G RGFG
Sbjct: 423 KTPASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRF--STFEDGNFRGFGH 480
Query: 68 VEFITKNEAKRV 79
VEF T AK+
Sbjct: 481 VEFATAEAAKKA 492
>gi|238599871|ref|XP_002394997.1| hypothetical protein MPER_05028 [Moniliophthora perniciosa FA553]
gi|215464946|gb|EEB95927.1| hypothetical protein MPER_05028 [Moniliophthora perniciosa FA553]
Length = 250
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRL---PKKMVGSGLHRGFGFVEFITKNEA 76
G+ + VRN+PF A + E+ LF++FG L++ R+ P+ +G RG GF F K +A
Sbjct: 145 GTTLFVRNVPFTATEDELRTLFRSFGPLRYARITIDPE----TGRSRGTGFACFWNKEDA 200
Query: 77 KR 78
+
Sbjct: 201 DK 202
>gi|398410055|ref|XP_003856481.1| hypothetical protein MYCGRDRAFT_31414 [Zymoseptoria tritici IPO323]
gi|339476366|gb|EGP91457.1| hypothetical protein MYCGRDRAFT_31414 [Zymoseptoria tritici IPO323]
Length = 740
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Query: 21 SKILVRNIPFQAKQ-SEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+K++VRN+P+ K+ ++E+LF +FG++K +PKK G GL GFGFV
Sbjct: 164 TKLIVRNLPWSIKRGDQLEKLFLSFGKVKKAYIPKK--GPGLMAGFGFV 210
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S + +RN+PF ++E+ F FG ++ R+ G+ +G GFV F K++A
Sbjct: 315 STLFIRNLPFTCTDEDLEDHFAQFGNTRYARVVMDY-GTERSKGTGFVCFYNKDDA 369
>gi|156064711|ref|XP_001598277.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980]
gi|154691225|gb|EDN90963.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 784
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K + I V+NIP +A + E ELF+ FG++ L + SG RGFGFV FI A
Sbjct: 238 KANFTNIYVKNIPVEATEEEFRELFEKFGDVTSASLARD-TESGKSRGFGFVNFINHEHA 296
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
+V + V N+PF A + V E F + E+K +RLP SG +GFG+V F +
Sbjct: 347 DVTSPESDTLFVGNLPFDADEDVVSEFFGSVAEIKSLRLPTDQE-SGRRKGFGYVSFNSV 405
Query: 74 NEAK 77
+AK
Sbjct: 406 EDAK 409
>gi|342887855|gb|EGU87283.1| hypothetical protein FOXB_02159 [Fusarium oxysporum Fo5176]
Length = 505
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A +R V+ ++ + + V N+PF Q V E F E+ VRLP SG +G
Sbjct: 341 ADRAQRHGDTVSPESDT-LFVGNLPFDVDQDTVREFFSEVAEVASVRLPTD-PDSGNLKG 398
Query: 65 FGFVEFITKNEAKRV 79
FG+V F + +AK+V
Sbjct: 399 FGYVSFNSVEDAKQV 413
>gi|357133920|ref|XP_003568569.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Brachypodium
distachyon]
Length = 366
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
R SN TG KI V +P +A ++ + F FG + +PK SG HRGFGFV
Sbjct: 221 RGYSNEPLVTGKKIFVGRLPQEANTDDLWDYFGRFGRIVDAYIPKDPKRSG-HRGFGFVT 279
Query: 70 FITKNEAKRV 79
F A RV
Sbjct: 280 FADDGVADRV 289
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T K + + ++I V IP +S F++FGE+ + +PK++ GS HRG G
Sbjct: 78 TPKEEMRASGNKKATRIFVARIPQSVDESMFRRHFQSFGEIIDLYMPKEL-GSKDHRGIG 136
Query: 67 FVEF 70
FV F
Sbjct: 137 FVTF 140
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
SK++V IP+ + E FG L + K SG RGFG+V F ++ +AK V
Sbjct: 2 ASKLVVLGIPWDVDTEGLREYMSKFGPLDDCIVMKDR-SSGRSRGFGYVTFSSEEDAKNV 60
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ V N+ F A Q V ELF A GE+ VRLP SG +GFG+VEF
Sbjct: 374 LFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDR-DSGQPKGFGYVEF 420
>gi|303275063|ref|XP_003056831.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461183|gb|EEH58476.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 25 VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
V NI ++ V E+F A GE+ V +P+ +G RGF FV FI KNEA+
Sbjct: 15 VDNIAYRVDVGRVREMFAAHGEIGDVYMPRDRT-TGNSRGFAFVRFIDKNEAE 66
>gi|84394313|ref|ZP_00993036.1| RNA-binding protein [Vibrio splendidus 12B01]
gi|84375043|gb|EAP91967.1| RNA-binding protein [Vibrio splendidus 12B01]
Length = 150
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 6 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
++ KS + K + + V N+P++A +S V ELF +GE+ VRL K +G RGF
Sbjct: 46 SSTDSKSDSEPKASTKTLYVGNLPYKANESHVRELFSEYGEVFAVRLMKDK-RTGKRRGF 104
Query: 66 GFV 68
GFV
Sbjct: 105 GFV 107
>gi|427703571|ref|YP_007046793.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
gi|427346739|gb|AFY29452.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
Length = 178
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
I V N+PF+A+Q +V ELF FGE+ LP + +G RGF F+E + R
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVVNCSLPLER-DTGRKRGFAFIEMADADTETRA 58
>gi|357144691|ref|XP_003573381.1| PREDICTED: uncharacterized protein LOC100836665 isoform 3
[Brachypodium distachyon]
Length = 580
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 9 KRKSSNVAKQTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
K +SN ++ TGSK L + N+PF A+ +V+E F GE+ VRL G +G+
Sbjct: 301 KTPASNQSQGTGSKTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRL--ATHEDGHPKGYAH 358
Query: 68 VEFITKNEAKRV 79
VEF T +AK+V
Sbjct: 359 VEFATAEDAKKV 370
>gi|449459926|ref|XP_004147697.1| PREDICTED: uncharacterized protein LOC101221788 [Cucumis sativus]
Length = 286
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+Q +LVRNIP + E+ F+ FG ++ V +PK +G RGF FVEF+ EA
Sbjct: 47 EQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYY-TGEPRGFAFVEFVDPYEA 105
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K+ G +G+GFV+FI +AK
Sbjct: 347 RLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEE--QGRSKGYGFVQFIDPAQAK 400
>gi|322788850|gb|EFZ14406.1| hypothetical protein SINV_08300 [Solenopsis invicta]
Length = 698
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 11 KSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
K S+ A G S+I+VRN+PF+A + V ++ FGE+K + L K+ G+ + G GF+
Sbjct: 29 KVSDTADANGQNSRIIVRNLPFKATEENVRRFYEPFGEIKEINLLKRPDGNLV--GCGFI 86
Query: 69 EF 70
F
Sbjct: 87 HF 88
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF-ITKNEAKRV 79
++I++RN+ FQ + + E F +GEL+ V++ + G G GF+++ I +N AK +
Sbjct: 185 ARIIIRNLDFQVTEDNLREHFSQYGELEEVKILTR--PDGKQTGVGFLQYNIVQNAAKAI 242
>gi|425781538|gb|EKV19498.1| Ribosome biogenesis (Nop4), putative [Penicillium digitatum PHI26]
gi|425782769|gb|EKV20659.1| Ribosome biogenesis (Nop4), putative [Penicillium digitatum Pd1]
Length = 722
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%), Gaps = 4/48 (8%)
Query: 22 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
K++VRN+P+ K+ E + LF++FG++KFV LPK+ +G GFGFV
Sbjct: 150 KLIVRNLPWSVKEPEDLNVLFRSFGKVKFVTLPKR---NGKLSGFGFV 194
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ V N+PF A + + E+F A G + +RLP + +G +GFG+V+F + +EAK
Sbjct: 358 LFVGNLPFSATEDALHEVFGAHGSVLGIRLPTEQE-TGRPKGFGYVQFSSIDEAK 411
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A K K+ + + + + + N+ + + ++ F FGEL VR+ SG RG
Sbjct: 236 AAAKKSKTEDAPEGASANLFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRE-SGRSRG 294
Query: 65 FGFVEFIT 72
FG+VE+ +
Sbjct: 295 FGYVEYTS 302
>gi|400592898|gb|EJP60937.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 1057
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
KR+ VA+ G ++ V N+ +S++ ++F FG + V +P+ + SG HRGF F+
Sbjct: 747 KRREGAVAE--GREVHVANLDNAVVESDIRDIFSKFGNVTRVNIPRGL--SGKHRGFCFL 802
Query: 69 EFITKNEAKR 78
+F TK +A++
Sbjct: 803 DFETKEQAEK 812
>gi|387593127|gb|EIJ88151.1| hypothetical protein NEQG_01595 [Nematocida parisii ERTm3]
gi|387596161|gb|EIJ93783.1| hypothetical protein NEPG_01355 [Nematocida parisii ERTm1]
Length = 316
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
I ++ + F A + ++ ELF FG++ VR+P+ G G +GFG+VEF TK
Sbjct: 92 IFIKGLNFSATEEDLRELFGKFGDIVEVRIPRSRDGPG-GKGFGYVEFETK 141
>gi|261210139|ref|ZP_05924436.1| RNA-binding protein [Vibrio sp. RC341]
gi|260840679|gb|EEX67228.1| RNA-binding protein [Vibrio sp. RC341]
Length = 151
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
T + V N+P++A +S V+ELF +GE+ VRL K +G RGFGFV I N+A+
Sbjct: 61 TTKTLYVGNLPYKANESHVKELFAEYGEVFAVRLMKDK-RTGKRRGFGFV-VIAANQAQ 117
>gi|302658783|ref|XP_003021091.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
gi|291184970|gb|EFE40473.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
Length = 479
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 9 KRKSSNVAKQTGSK-------ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
+ ++ N AK G + + + NI F A ++ V+ELF +G ++ +RLP SG
Sbjct: 325 RERADNRAKSFGDQTSPESDTLFIGNISFSADENMVQELFSKYGAIQGIRLPTDPE-SGR 383
Query: 62 HRGFGFVEFITKNEAK 77
+GFG+V+F + +EA+
Sbjct: 384 PKGFGYVQFSSVDEAR 399
>gi|269468289|gb|EEZ79971.1| RNA-binding protein [uncultured SUP05 cluster bacterium]
Length = 83
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
KIL+RN+P ++E+EELFK +GE++ L +G +GFGFVE AK
Sbjct: 2 KILIRNLPRTLSENELEELFKVYGEVQSCTLILDK-ATGESKGFGFVEIAKVGNAK 56
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 3 SEATTVKRKSSNVAKQTGS----KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG 58
+E R + A Q+ ++ V NI F + +++ +F+ FGEL+FV+L K+ G
Sbjct: 298 AEKNRQARNTEGTATQSNGIPFHRLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEEAG 357
Query: 59 SGLHRGFGFVEFITKNEAK 77
+G+GFV+FI +AK
Sbjct: 358 RS--KGYGFVQFIDPTQAK 374
>gi|388852088|emb|CCF54264.1| related to Nucleolar protein NOP4 [Ustilago hordei]
Length = 1057
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
A + G+ + VRN+P+QA + E+ LF+ FG L++ ++ + +G GFV F +
Sbjct: 585 APEEGTTLFVRNLPYQATEEELRNLFRTFGPLRYAKITMDKT-TNRSKGTGFVCFWQADS 643
Query: 76 AK 77
A+
Sbjct: 644 AE 645
>gi|255565200|ref|XP_002523592.1| RNA-binding protein, putative [Ricinus communis]
gi|223537154|gb|EEF38787.1| RNA-binding protein, putative [Ricinus communis]
Length = 359
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
A+ G KI V +P +A ++ + F FG + V +PK +G HRGFGFV F +
Sbjct: 219 ARGVGKKIFVGRLPQEATPEDLRQYFGRFGHILDVYVPKDPKRTG-HRGFGFVTFAEEGV 277
Query: 76 AKRV 79
A RV
Sbjct: 278 ADRV 281
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
K++V IP++ + E FGEL + K+ SG RGFG+V F + +AK
Sbjct: 4 KLVVLGIPWEVDTEGLREYMTKFGELDDCIVMKER-SSGRSRGFGYVTFASAEDAK 58
>gi|148238350|ref|YP_001223737.1| RNA-binding protein [Synechococcus sp. WH 7803]
gi|147846889|emb|CAK22440.1| RNA-binding protein, RRM domain [Synechococcus sp. WH 7803]
Length = 207
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
I V N+PF+A+Q +V ELF AFGE+ LP + +G RGF FVE
Sbjct: 3 IFVGNLPFRAEQEDVIELFAAFGEVTNCALPLER-DTGRKRGFAFVE 48
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S + V N+ + A + V E F GE+K VRLP SG +GFG+VEF+ + AK
Sbjct: 444 SVLFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRE-SGRPKGFGYVEFVDVDAAK 499
>gi|88809350|ref|ZP_01124858.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. WH 7805]
gi|88786569|gb|EAR17728.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. WH 7805]
Length = 197
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
I V N+PF+A+Q +V ELF AFGE+ LP + +G RGF FVE
Sbjct: 3 IFVGNLPFRAEQEDVIELFAAFGEVTNCALPLER-DTGRKRGFAFVEM 49
>gi|221488187|gb|EEE26401.1| hypothetical protein TGGT1_109290 [Toxoplasma gondii GT1]
gi|221508700|gb|EEE34269.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 208
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
TG +L+RN+ F+ V ++F+ FG ++ V LP + RGFGFVEF ++ A+
Sbjct: 3 TGCSLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHF-TKRPRGFGFVEFYEESTAQ 60
>gi|254431254|ref|ZP_05044957.1| RNA-binding region RNP-1 [Cyanobium sp. PCC 7001]
gi|197625707|gb|EDY38266.1| RNA-binding region RNP-1 [Cyanobium sp. PCC 7001]
Length = 169
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
I V N+PF+A+Q +V ELF FGE+ LP + +G RGF FVE R
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVVSCALPLERD-TGRKRGFAFVEMADPEAESRA 58
>gi|126308673|ref|XP_001371051.1| PREDICTED: RNA binding protein fox-1 homolog 3-like isoform 2
[Monodelphis domestica]
Length = 372
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S N KQ ++ V NIPF+ + ++ ++F FG++ V + GS +GFGFV F
Sbjct: 89 SENTDKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS---KGFGFVTFE 145
Query: 72 TKNEAKR 78
T +A R
Sbjct: 146 TSTDADR 152
>gi|391339315|ref|XP_003743997.1| PREDICTED: RNA-binding protein 28-like [Metaseiulus occidentalis]
Length = 834
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
K+ S+++VRN+ F+A + ++ + F FGE++ V +PKK G RGF FV+F
Sbjct: 95 KKQKSRLIVRNLSFKATEEDLMKSFGKFGEIQSVNIPKKP--DGKMRGFAFVQF 146
>gi|237832865|ref|XP_002365730.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211963394|gb|EEA98589.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 208
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
TG +L+RN+ F+ V ++F+ FG ++ V LP + RGFGFVEF ++ A+
Sbjct: 3 TGCSLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHF-TKRPRGFGFVEFYEESTAQ 60
>gi|153803565|ref|ZP_01958151.1| RNA-binding protein [Vibrio cholerae MZO-3]
gi|419827855|ref|ZP_14351348.1| RNA recognition motif family protein [Vibrio cholerae HC-1A2]
gi|419831516|ref|ZP_14354986.1| RNA recognition motif family protein [Vibrio cholerae HC-61A2]
gi|422915886|ref|ZP_16950243.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-02A1]
gi|423845653|ref|ZP_17718609.1| RNA recognition motif family protein [Vibrio cholerae HC-59A1]
gi|423877865|ref|ZP_17722238.1| RNA recognition motif family protein [Vibrio cholerae HC-60A1]
gi|424014970|ref|ZP_17754861.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-55B2]
gi|424623492|ref|ZP_18061980.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-50A1]
gi|424632013|ref|ZP_18070145.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-52A1]
gi|124120902|gb|EAY39645.1| RNA-binding protein [Vibrio cholerae MZO-3]
gi|341641906|gb|EGS66423.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-02A1]
gi|408017385|gb|EKG54892.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-50A1]
gi|408022916|gb|EKG60101.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-52A1]
gi|408624606|gb|EKK97550.1| RNA recognition motif family protein [Vibrio cholerae HC-1A2]
gi|408645175|gb|EKL16841.1| RNA recognition motif family protein [Vibrio cholerae HC-60A1]
gi|408646361|gb|EKL17975.1| RNA recognition motif family protein [Vibrio cholerae HC-59A1]
gi|408652665|gb|EKL23875.1| RNA recognition motif family protein [Vibrio cholerae HC-61A2]
gi|408862844|gb|EKM02345.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-55B2]
Length = 152
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T+ A T + V N+P++A +S V+ELF +GE+ VRL K +G RGFG
Sbjct: 50 TLSSSQDEEASSTTKTLYVGNLPYKANESHVKELFAEYGEVFAVRLMKDK-RTGKRRGFG 108
Query: 67 FV 68
FV
Sbjct: 109 FV 110
>gi|444723044|gb|ELW63709.1| putative RNA-binding protein 19 [Tupaia chinensis]
Length = 1033
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFK 42
A T RK KQT SKILVRNIPFQA E+ ELF+
Sbjct: 920 AITSARKKQVSRKQTTSKILVRNIPFQADSREIRELFR 957
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ +LF FG L L K G R FGF+ F ++ EA+
Sbjct: 47 SRLIVKNLPNGMKEERFRQLFSTFGTLTDCSL--KFTKDGKFRKFGFIGFKSEEEAQ 101
>gi|153217405|ref|ZP_01951156.1| RNA-binding protein [Vibrio cholerae 1587]
gi|124113575|gb|EAY32395.1| RNA-binding protein [Vibrio cholerae 1587]
Length = 152
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T+ A T + V N+P++A +S V+ELF +GE+ VRL K +G RGFG
Sbjct: 50 TLSSSQDEEASSTTKTLYVGNLPYKANESHVKELFAEYGEVFAVRLMKDK-RTGKRRGFG 108
Query: 67 FV 68
FV
Sbjct: 109 FV 110
>gi|153826299|ref|ZP_01978966.1| RNA-binding protein [Vibrio cholerae MZO-2]
gi|153831288|ref|ZP_01983955.1| RNA-binding protein [Vibrio cholerae 623-39]
gi|229512364|ref|ZP_04401840.1| RNA-binding protein [Vibrio cholerae TMA 21]
gi|229520052|ref|ZP_04409480.1| RNA-binding protein [Vibrio cholerae TM 11079-80]
gi|254292227|ref|ZP_04962992.1| RNA-binding protein [Vibrio cholerae AM-19226]
gi|297581775|ref|ZP_06943696.1| RNA-binding protein [Vibrio cholerae RC385]
gi|417822318|ref|ZP_12468919.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HE48]
gi|419835093|ref|ZP_14358542.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-46B1]
gi|421341720|ref|ZP_15792130.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-43B1]
gi|421349031|ref|ZP_15799401.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HE-25]
gi|422921410|ref|ZP_16954647.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae BJG-01]
gi|423733440|ref|ZP_17706673.1| RNA recognition motif family protein [Vibrio cholerae HC-41B1]
gi|424007736|ref|ZP_17750695.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-44C1]
gi|429886502|ref|ZP_19368058.1| RNA-binding protein [Vibrio cholerae PS15]
gi|148873232|gb|EDL71367.1| RNA-binding protein [Vibrio cholerae 623-39]
gi|149739967|gb|EDM54146.1| RNA-binding protein [Vibrio cholerae MZO-2]
gi|150421863|gb|EDN13845.1| RNA-binding protein [Vibrio cholerae AM-19226]
gi|229342840|gb|EEO07830.1| RNA-binding protein [Vibrio cholerae TM 11079-80]
gi|229350619|gb|EEO15563.1| RNA-binding protein [Vibrio cholerae TMA 21]
gi|297533869|gb|EFH72709.1| RNA-binding protein [Vibrio cholerae RC385]
gi|340049754|gb|EGR10667.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HE48]
gi|341649118|gb|EGS73118.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae BJG-01]
gi|395947304|gb|EJH57960.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-43B1]
gi|395956880|gb|EJH67470.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HE-25]
gi|408632380|gb|EKL04836.1| RNA recognition motif family protein [Vibrio cholerae HC-41B1]
gi|408859535|gb|EKL99193.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-46B1]
gi|408867974|gb|EKM07322.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-44C1]
gi|429226649|gb|EKY32736.1| RNA-binding protein [Vibrio cholerae PS15]
Length = 152
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T+ A T + V N+P++A +S V+ELF +GE+ VRL K +G RGFG
Sbjct: 50 TLSSSQDEEASSTTKTLYVGNLPYKANESHVKELFAEYGEVFAVRLMKDK-RTGKRRGFG 108
Query: 67 FV 68
FV
Sbjct: 109 FV 110
>gi|58262518|ref|XP_568669.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134119018|ref|XP_772011.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254615|gb|EAL17364.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230843|gb|AAW47152.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 942
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
GS + +RN+PF+ + E+ LF++FG L++ ++ +G RG GFV F A
Sbjct: 417 DVGSTLFIRNLPFETTELELNTLFRSFGPLRYAKITIDKA-TGRSRGTGFVCFWKNEHAD 475
Query: 78 RV 79
V
Sbjct: 476 EV 477
>gi|423810794|ref|ZP_17714836.1| RNA recognition motif family protein [Vibrio cholerae HC-55C2]
gi|423996057|ref|ZP_17739577.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-02C1]
gi|424018114|ref|ZP_17757927.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-59B1]
gi|424628063|ref|ZP_18066386.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-51A1]
gi|424635101|ref|ZP_18073135.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-55A1]
gi|424638925|ref|ZP_18076833.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-56A1]
gi|424647178|ref|ZP_18084869.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-57A1]
gi|443526051|ref|ZP_21092154.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-78A1]
gi|408028286|gb|EKG65191.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-56A1]
gi|408028572|gb|EKG65455.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-55A1]
gi|408038470|gb|EKG74809.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-57A1]
gi|408059936|gb|EKG94666.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-51A1]
gi|408637427|gb|EKL09489.1| RNA recognition motif family protein [Vibrio cholerae HC-55C2]
gi|408855563|gb|EKL95264.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-02C1]
gi|408871498|gb|EKM10738.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-59B1]
gi|443455686|gb|ELT19450.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-78A1]
Length = 146
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T+ A T + V N+P++A +S V+ELF +GE+ VRL K +G RGFG
Sbjct: 44 TLSSSQDEEASSTTKTLYVGNLPYKANESHVKELFAEYGEVFAVRLMKDK-RTGKRRGFG 102
Query: 67 FV 68
FV
Sbjct: 103 FV 104
>gi|292491403|ref|YP_003526842.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
gi|291579998|gb|ADE14455.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
Length = 91
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+ I V N+PFQ Q E+ ELF+ FG + V+L +G RGFGFVE
Sbjct: 2 TSIYVGNLPFQCSQDEIRELFEPFGAVNSVKLISDRE-TGKPRGFGFVE 49
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV+F +A+
Sbjct: 279 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD--DTGRSRGYGFVQFRDATQAR 332
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +++++ +F+ FGEL+FV+L K G RG+GFV+F N+A+
Sbjct: 276 RLYVGNIHFSITENDLQNVFEPFGELEFVQLQKDETGRS--RGYGFVQFRDPNQAR 329
>gi|71003994|ref|XP_756663.1| hypothetical protein UM00516.1 [Ustilago maydis 521]
gi|46095735|gb|EAK80968.1| hypothetical protein UM00516.1 [Ustilago maydis 521]
Length = 1077
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
A + G+ + VRN+P+QA + E+ LF++FG L++ ++ + +G GFV F +
Sbjct: 604 APEEGTTLFVRNLPYQATEEELRNLFRSFGPLRYAKITMDKT-TNRSKGTGFVCFWQASS 662
Query: 76 A 76
A
Sbjct: 663 A 663
>gi|395533328|ref|XP_003768712.1| PREDICTED: RNA binding protein fox-1 homolog 3 [Sarcophilus
harrisii]
Length = 454
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S N KQ ++ V NIPF+ + ++ ++F FG++ V + GS +GFGFV F
Sbjct: 171 SENTDKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS---KGFGFVTFE 227
Query: 72 TKNEAKR 78
T +A R
Sbjct: 228 TSTDADR 234
>gi|356576977|ref|XP_003556606.1| PREDICTED: uncharacterized protein LOC100789712 [Glycine max]
Length = 377
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 17 KQTGSK-ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
+ GSK I+ RN+ + +++++E LFK GE+ VRL G RGFG VEF T
Sbjct: 161 RNAGSKTIVTRNLSYSVERADLENLFKPCGEVVDVRL--HTDAEGRFRGFGHVEFATAEA 218
Query: 76 AKRV 79
A++
Sbjct: 219 AQKA 222
>gi|302038618|ref|YP_003798940.1| putative RNA-binding protein RbpA [Candidatus Nitrospira
defluvii]
gi|300606682|emb|CBK43015.1| putative RNA-binding protein RbpA [Candidatus Nitrospira
defluvii]
Length = 108
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
GSKI V +P+ A + ++ +LF G ++ R+ +G RGFGFVE + +EA++
Sbjct: 2 GSKIYVGGLPYSATEQQLSDLFAVHGAVESARIITDKF-TGQSRGFGFVEMASSDEAQKA 60
>gi|209881578|ref|XP_002142227.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557833|gb|EEA07878.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 533
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++I + ++P+ ++ +FKAFG + +L + G HRG+GF+EF T ++AK
Sbjct: 278 NRIYIGSVPYSFTPDDLRHIFKAFGVILSCQLIPSVEKPGTHRGYGFIEFGTPDQAK 334
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 12 SSNVAKQT---GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
SSN+A + G++I V ++ + ++++ ++F +FG + + +P++ +GF F+
Sbjct: 144 SSNIAPRQVTQGARIYVGSLDYSLSEADLRQVFGSFGTIVNIDMPRE---GNRSKGFCFI 200
Query: 69 EFITKNEAK 77
E+ T+ A+
Sbjct: 201 EYTTQESAE 209
>gi|352093687|ref|ZP_08954858.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
gi|351680027|gb|EHA63159.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
Length = 118
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
I + N+ FQA+Q ++ +LF +GE+K LP +G RGFGFVE T + ++
Sbjct: 3 IYIGNLSFQAEQEDLLDLFGQYGEVKSASLPLDRE-TGRKRGFGFVEMATDEDEQKA 58
>gi|255572397|ref|XP_002527136.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223533496|gb|EEF35238.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 642
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 4 EATTVKRKS--SNVAKQTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
+ATT K K+ + + TGSK L V N+PFQ ++++VE+ FK GE+ VR +
Sbjct: 367 QATTKKPKTPVTPQVQSTGSKTLFVGNLPFQVERADVEDFFKGAGEVVDVRF--ALDQDQ 424
Query: 61 LHRGFGFVEFIT 72
+GFG VEF T
Sbjct: 425 RFKGFGHVEFAT 436
>gi|336316921|ref|ZP_08571806.1| RRM domain-containing RNA-binding protein [Rheinheimera sp. A13L]
gi|335878778|gb|EGM76692.1| RRM domain-containing RNA-binding protein [Rheinheimera sp. A13L]
Length = 163
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ + V N+P++A + V ELF+ FG + VRL K +G RGFGFVE K+ K +
Sbjct: 77 ATLYVGNLPYRANEDAVRELFQKFGVVVNVRLMKDR-QTGRRRGFGFVEVAAKDANKMI 134
>gi|148241113|ref|YP_001226270.1| RNA-binding protein [Synechococcus sp. RCC307]
gi|147849423|emb|CAK26917.1| RNA-binding protein, RRM domain [Synechococcus sp. RCC307]
Length = 204
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
I V N+PF+A+Q ++ ELF +FGE+ LP + +G RGF FVE + +R
Sbjct: 3 IFVGNLPFRAEQEDIIELFASFGEVANCSLPLER-DTGRKRGFAFVEMADEATEERA 58
>gi|327305337|ref|XP_003237360.1| RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326460358|gb|EGD85811.1| RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 422
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 9 KRKSSNVAKQTGSK-------ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
+ ++ N AK G + + + NI F A ++ V+ELF +G ++ +RLP SG
Sbjct: 324 RERADNRAKSFGDQTSPESDTLFIGNISFSADENMVQELFSKYGMIQGIRLPTDPE-SGR 382
Query: 62 HRGFGFVEFITKNEAK 77
+GFG+V+F + +EA+
Sbjct: 383 PKGFGYVQFSSVDEAR 398
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 4 EATTVKRKSS-NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
EA V +K+ +V + + + V N+ + + + F+ FGEL R+ SG
Sbjct: 219 EAEPVAKKAKVDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELAGTRIVTDRE-SGRS 277
Query: 63 RGFGFVEFITKNEA 76
RGFG+VEF+ +A
Sbjct: 278 RGFGYVEFVNVEDA 291
>gi|422305571|ref|ZP_16392771.1| RNA recognition motif family protein [Vibrio cholerae CP1035(8)]
gi|408628601|gb|EKL01336.1| RNA recognition motif family protein [Vibrio cholerae CP1035(8)]
Length = 146
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T+ A T + V N+P++A +S V+ELF +GE+ VRL K +G RGFG
Sbjct: 44 TLSSSQDEEASSTTKTLYVGNLPYKANESHVKELFAEYGEVFAVRLMKDK-RTGKRRGFG 102
Query: 67 FV 68
FV
Sbjct: 103 FV 104
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV+F +A+
Sbjct: 285 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD--DNGRSRGYGFVQFRDAGQAR 338
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S++ +F+ FGEL+FV+L K +G RG+GFV+F ++A+
Sbjct: 311 RLYVGNIHFSITESDLRNVFEPFGELEFVQLQKD--DTGRSRGYGFVQFRDSDQAR 364
>gi|302830338|ref|XP_002946735.1| hypothetical protein VOLCADRAFT_120369 [Volvox carteri f.
nagariensis]
gi|300267779|gb|EFJ51961.1| hypothetical protein VOLCADRAFT_120369 [Volvox carteri f.
nagariensis]
Length = 683
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
Q + + VRNIP +SEV +LF+ F L VRL + SG RG FVEF T+ +A
Sbjct: 221 QPSNLVHVRNIPEDRDESEVRQLFEGFSGLLSVRLVRSRT-SGASRGNAFVEFATEADA 278
>gi|296411655|ref|XP_002835545.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629331|emb|CAZ79702.1| unnamed protein product [Tuber melanosporum]
Length = 533
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL+FV+L K+ G RG+GFV++ N+A+
Sbjct: 238 RLYVGNIHFSITESDLQNVFEPFGELEFVQLQKEE--GGRSRGYGFVQYRDPNQAR 291
>gi|302892801|ref|XP_003045282.1| hypothetical protein NECHADRAFT_43518 [Nectria haematococca mpVI
77-13-4]
gi|256726207|gb|EEU39569.1| hypothetical protein NECHADRAFT_43518 [Nectria haematococca mpVI
77-13-4]
Length = 718
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 18 QTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
Q K+++RN+P+ K SE + LF++FG++KF LP+ G +GFGF+ K A
Sbjct: 142 QKPPKLIIRNLPWSIKTSEQLSNLFRSFGKIKFADLPQ---SQGKLKGFGFITIRGKKNA 198
Query: 77 KRV 79
++
Sbjct: 199 EKA 201
>gi|229527101|ref|ZP_04416495.1| RNA-binding protein [Vibrio cholerae 12129(1)]
gi|417818771|ref|ZP_12465392.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HE39]
gi|423943713|ref|ZP_17733098.1| RNA recognition motif family protein [Vibrio cholerae HE-40]
gi|423973292|ref|ZP_17736643.1| RNA recognition motif family protein [Vibrio cholerae HE-46]
gi|229335332|gb|EEO00815.1| RNA-binding protein [Vibrio cholerae 12129(1)]
gi|340044120|gb|EGR05075.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HE39]
gi|408662518|gb|EKL33454.1| RNA recognition motif family protein [Vibrio cholerae HE-40]
gi|408666528|gb|EKL37313.1| RNA recognition motif family protein [Vibrio cholerae HE-46]
Length = 152
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
A T + V N+P++A +S V+ELF +GE+ VRL K +G RGFGFV
Sbjct: 59 ASSTTKTLYVGNLPYKANESHVKELFAEYGEVFAVRLMKDK-RTGKRRGFGFV 110
>gi|159471227|ref|XP_001693758.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283261|gb|EDP09012.1| predicted protein [Chlamydomonas reinhardtii]
Length = 86
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+LVRNIP ++ + F+ FGEL+ V +P+ + RGFGF+EF +A
Sbjct: 2 VLVRNIPLHMTVDDLRKKFEKFGELRDVYIPRDYY-TQRSRGFGFIEFRDARDA 54
>gi|113953042|ref|YP_730260.1| RNA-binding protein [Synechococcus sp. CC9311]
gi|113880393|gb|ABI45351.1| putative RNA-binding protein [Synechococcus sp. CC9311]
Length = 126
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
I + N+ FQA+Q ++ +LF +GE+K LP +G RGFGFVE T + ++
Sbjct: 3 IYIGNLSFQAEQEDLLDLFGQYGEVKSASLPLDRE-TGRKRGFGFVEMATDEDEQKA 58
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV+F +A+
Sbjct: 284 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD--DNGRSRGYGFVQFRDAGQAR 337
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV+F +A+
Sbjct: 283 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD--DNGRSRGYGFVQFRDAGQAR 336
>gi|224105333|ref|XP_002313773.1| predicted protein [Populus trichocarpa]
gi|222850181|gb|EEE87728.1| predicted protein [Populus trichocarpa]
Length = 974
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K+++RN+PF+AK +E++ +F++ G + V +P +GL +GF FV+F K +A
Sbjct: 281 KLIIRNLPFKAKPNEIKGVFESAGCVWDVFVPHNS-ETGLSKGFAFVKFTCKQDA 334
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ V ++P+ +S++EE F G ++ + + GS HRGFGFV+F K++A R
Sbjct: 21 LFVSSLPYSFTKSQLEETFSDVGPIRRCFMVTQK-GSTEHRGFGFVQFALKDDANRA 76
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVR-----NIPFQAKQSEVEELFKAFGE-LKFVRLPKK 55
GS ++ K K SN G L R N+PF + EV++ F AFGE L FV + +
Sbjct: 482 GSPLSSGKSKPSNTKHIDGEDDLQRTVFISNLPFDVESGEVKQRFSAFGEVLSFVPVLHQ 541
Query: 56 MVGSGLHRGFGFVEFITKN 74
+ RG GF++F T +
Sbjct: 542 VTKRP--RGTGFLKFKTAD 558
>gi|124021728|ref|YP_001016035.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9303]
gi|123962014|gb|ABM76770.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9303]
Length = 202
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
I V N+PF+A+Q +V ELF FGE+ LP + +G RGF FVE ++
Sbjct: 3 IFVGNLPFRAEQEDVIELFAPFGEVANCALPLER-DTGRKRGFAFVEMADES 53
>gi|406867457|gb|EKD20495.1| 4 family polyadenylate binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 785
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ I V+NIP +A E ELF+ FG++ L + S RGFGFV FI A +
Sbjct: 243 TNIYVKNIPVEATDEEFRELFEKFGDVTSASLARD-TDSNKSRGFGFVNFINHEHAAKA 300
>gi|302406056|ref|XP_003000864.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
gi|261360122|gb|EEY22550.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
Length = 769
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 35/48 (72%), Gaps = 4/48 (8%)
Query: 22 KILVRNIPFQAK-QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
K+++RN+P+ K ++++ LF+++G++KF LP + +G RGFGFV
Sbjct: 134 KLIIRNLPWSVKTPAQLQALFQSYGKIKFADLP---MNNGRLRGFGFV 178
>gi|86148656|ref|ZP_01066937.1| RNA-binding protein [Vibrio sp. MED222]
gi|218710894|ref|YP_002418515.1| RNA-binding protein [Vibrio splendidus LGP32]
gi|85833575|gb|EAQ51752.1| RNA-binding protein [Vibrio sp. MED222]
gi|218323913|emb|CAV20274.1| RNA-binding protein [Vibrio splendidus LGP32]
Length = 150
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 6 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
++ KS + K + + V N+P++A +S V ELF +GE+ VRL K +G RGF
Sbjct: 46 SSTNSKSESEPKASTKTLYVGNLPYKANESHVRELFSEYGEVFAVRLMKDK-RTGKRRGF 104
Query: 66 GFV 68
GFV
Sbjct: 105 GFV 107
>gi|58262520|ref|XP_568670.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134119016|ref|XP_772012.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254616|gb|EAL17365.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230844|gb|AAW47153.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 999
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
GS + +RN+PF+ + E+ LF++FG L++ ++ +G RG GFV F A V
Sbjct: 419 GSTLFIRNLPFETTELELNTLFRSFGPLRYAKITIDKA-TGRSRGTGFVCFWKNEHADEV 477
>gi|321265754|ref|XP_003197593.1| hypothetical protein CGB_N3080W [Cryptococcus gattii WM276]
gi|317464073|gb|ADV25806.1| Hypothetical protein CGB_N3080W [Cryptococcus gattii WM276]
Length = 988
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
GS + +RN+PF+ + E+ LF++FG L++ ++ +G RG GFV F A V
Sbjct: 423 GSTLFIRNLPFETTELELNTLFRSFGPLRYAKITIDKA-TGRSRGTGFVCFWKNEHADEV 481
>gi|126328722|ref|XP_001364507.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Monodelphis
domestica]
Length = 302
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|350635107|gb|EHA23469.1| hypothetical protein ASPNIDRAFT_173997 [Aspergillus niger ATCC
1015]
Length = 235
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A R + A + V N+PF A + V ELF G + +RLP SG +G
Sbjct: 94 ANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTD-PDSGRPKG 152
Query: 65 FGFVEFITKNEAK 77
FG+V++ + +EA+
Sbjct: 153 FGYVQYSSVDEAR 165
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ + V N+ + ++ ++ F++FGEL VR+ + +G RGFG+VE+ +A +
Sbjct: 1 ANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTER-DTGRSRGFGYVEYTNAVDAAKA 58
>gi|348684206|gb|EGZ24021.1| hypothetical protein PHYSODRAFT_481443 [Phytophthora sojae]
Length = 519
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 7/48 (14%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ +R++P QA+++++ ELFK +G + V +P + RGFGFV+F
Sbjct: 380 LFIRDVPTQARENDLRELFKGYGSIAGVSIPGQ-------RGFGFVDF 420
>gi|336262061|ref|XP_003345816.1| hypothetical protein SMAC_07100 [Sordaria macrospora k-hell]
gi|380088590|emb|CCC13476.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 772
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
KR + Q +K+++RN+P+ K+SE + ELFK +G+++F LP G GFGF
Sbjct: 145 KRAEAAEEAQKPNKLIIRNLPWSIKKSEQLAELFKPYGKVRFADLPN---DKGKLSGFGF 201
Query: 68 V 68
V
Sbjct: 202 V 202
>gi|4006877|emb|CAB16795.1| RNA-binding like protein [Arabidopsis thaliana]
gi|7270645|emb|CAB80362.1| RNA-binding like protein [Arabidopsis thaliana]
Length = 306
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
G+KI V +P +A ++ + F FG ++ +PK SG HRGFGFV F A RV
Sbjct: 183 GNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSG-HRGFGFVTFAENGVADRV 241
>gi|356541820|ref|XP_003539370.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 365
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
A++T KI V +P +A ++ + F FG + V +P+ +G HRGFGFV F
Sbjct: 226 ARRTSKKIFVGRLPPEATSDDLRQYFGRFGRILDVYVPRDPKRAG-HRGFGFVTFAEDGA 284
Query: 76 AKRV 79
A RV
Sbjct: 285 ADRV 288
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
++I V IP ++ F+ +GE+ + +PK GS +HRG GF+ F + + + +
Sbjct: 92 TRIFVARIPQSVTEATFRSHFEKYGEITDLYMPKDQ-GSKMHRGIGFITFASADSVENL 149
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
K++V IP+ + E FGEL+ + K+ +G RGFG+V F + ++AK V
Sbjct: 5 KLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKER-STGRSRGFGYVTFASVDDAKEV 61
>gi|255641298|gb|ACU20926.1| unknown [Glycine max]
gi|255642525|gb|ACU21526.1| unknown [Glycine max]
Length = 213
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
+ +++T KI V +P +A ++ + F FG + V +P+ +G HRGFGFV F
Sbjct: 73 DPSRRTSKKIFVGRLPPEATSDDLRQYFGRFGRILDVYVPRDPKRTG-HRGFGFVTFAED 131
Query: 74 NEAKRV 79
A RV
Sbjct: 132 GVADRV 137
>gi|88811230|ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88791769|gb|EAR22880.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 94
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
I V N+PF A + E+ ELF A+G + VRL +G RGFGFV + A +
Sbjct: 4 IYVGNLPFSASEDELRELFAAYGNVDSVRLMTDR-DTGRPRGFGFVTMSDTDAASAI 59
>gi|33862287|ref|NP_893847.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9313]
gi|33640400|emb|CAE20189.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9313]
Length = 199
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
I V N+PF+A+Q +V ELF FGE+ LP + +G RGF FVE ++
Sbjct: 3 IFVGNLPFRAEQEDVIELFAPFGEVANCALPLER-DTGRKRGFAFVEMADES 53
>gi|303390218|ref|XP_003073340.1| polyadenylate binding protein 2 [Encephalitozoon intestinalis ATCC
50506]
gi|303302486|gb|ADM11980.1| polyadenylate binding protein 2 [Encephalitozoon intestinalis ATCC
50506]
Length = 420
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
+++ +K+L+RN+PFQA + +V ++F +F + VR+P K G+ RGF FV F + E
Sbjct: 338 SRKGTNKLLIRNVPFQASKEDVRKIFDSFHVVN-VRIPVKREGTS--RGFCFVTFQSPEE 394
>gi|357492235|ref|XP_003616406.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355517741|gb|AES99364.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 286
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+LVRNIP + E+ F+ FG ++ V +PK SG RGF FV+F+ EA
Sbjct: 49 LLVRNIPLDCRPEELRAPFERFGPVRDVYIPKDYY-SGQPRGFAFVQFVDAYEA 101
>gi|323508056|emb|CBQ67927.1| related to Nucleolar protein NOP4 [Sporisorium reilianum SRZ2]
Length = 1039
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
A + G+ + VRN+P+QA + E+ LF+ FG L++ ++ + +G GFV F +
Sbjct: 567 APEEGTTLFVRNLPYQATEEELRNLFRTFGPLRYAKITMDKT-TNRSKGTGFVCFWQSSS 625
Query: 76 A 76
A
Sbjct: 626 A 626
>gi|313681522|ref|YP_004059260.1| rnp-1 like RNA-binding protein [Sulfuricurvum kujiense DSM 16994]
gi|313154382|gb|ADR33060.1| RNP-1 like RNA-binding protein [Sulfuricurvum kujiense DSM 16994]
Length = 90
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
++I V NIP+ ++++++LF +GE+ V+ +G RGFGFVE K+EA +
Sbjct: 2 TQIYVGNIPYGKDENDLKDLFGQYGEVSSVKFVNDKE-TGRFRGFGFVEMANKDEADKA 59
>gi|303389841|ref|XP_003073152.1| putative polyadenylate-binding protein 1 [Encephalitozoon
intestinalis ATCC 50506]
gi|303302297|gb|ADM11792.1| putative polyadenylate-binding protein 1 [Encephalitozoon
intestinalis ATCC 50506]
Length = 347
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 13 SNVAKQTGSK----ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
S + K+ G + + NI ++ ++E++F GE+K VRL S +H+G+G+V
Sbjct: 130 SEIPKELGPPNEVIVYISNIDLDIEEEQLEDIFGKMGEIKEVRLAYG--SSFIHKGYGYV 187
Query: 69 EFITKNEAKR 78
EF+ + +AKR
Sbjct: 188 EFLRRIDAKR 197
>gi|18419943|ref|NP_568011.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|238481137|ref|NP_001154290.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15081787|gb|AAK82548.1| AT4g36960/C7A10_400 [Arabidopsis thaliana]
gi|23308345|gb|AAN18142.1| At4g36960/C7A10_400 [Arabidopsis thaliana]
gi|332661324|gb|AEE86724.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332661325|gb|AEE86725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 379
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
G+KI V +P +A ++ + F FG ++ +PK SG HRGFGFV F A RV
Sbjct: 239 GNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSG-HRGFGFVTFAENGVADRV 297
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
+ T K + AK+ ++I V IP +S+ F+ +GE+ + +PK S HR
Sbjct: 75 KVATPKEEMRQPAKKV-TRIFVARIPSSVSESDFRSHFERYGEITDLYMPKDY-NSKQHR 132
Query: 64 GFGFVEFITKNEAK 77
G GF+ F + + +
Sbjct: 133 GIGFITFSSADSVE 146
>gi|449305095|gb|EMD01102.1| hypothetical protein BAUCODRAFT_118813 [Baudoinia compniacensis
UAMH 10762]
Length = 809
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQS-EVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
VK K+ + +K++VRN+P+ K S ++E+LF+++G++K +P+K G GL GF
Sbjct: 183 AVKGKAQREVVRQSTKLIVRNLPWSIKGSHQLEKLFRSYGKIKQAYVPRKGNG-GLVAGF 241
Query: 66 GFV 68
GFV
Sbjct: 242 GFV 244
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR--GFGF 67
++S N ++ S + VRN+PF ++E+ F FG +++ R+ ++ +G R G F
Sbjct: 357 KRSQNFSEDKSSTLFVRNLPFICTDEDLEDHFTRFGAVRYARV---VMDAGTERSKGTAF 413
Query: 68 VEFITKNEA 76
V F ++A
Sbjct: 414 VCFYNTSDA 422
>gi|166365958|ref|YP_001658231.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|425466552|ref|ZP_18845850.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
gi|166088331|dbj|BAG03039.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|389830907|emb|CCI26790.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
Length = 98
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT-KNEAKRV 79
I V N+PF+ Q +V E+FK +GE+K V LP + RGF FVE T + EAK +
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGEIKRVHLPMDRE-TKRKRGFAFVEMETPEQEAKAI 59
>gi|405123946|gb|AFR98709.1| nucleolar protein 4 [Cryptococcus neoformans var. grubii H99]
Length = 994
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
GS + +RN+PF+ + E+ LF++FG L++ ++ +G RG GFV F A V
Sbjct: 417 GSTLFIRNLPFETTELELNALFRSFGPLRYAKITIDKA-TGRSRGTGFVCFWKNEHADEV 475
>gi|392575547|gb|EIW68680.1| hypothetical protein TREMEDRAFT_44501 [Tremella mesenterica DSM
1558]
Length = 938
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
GS + +RN+PF+ + E+ LF++FG L++ ++ +G RG GFV F A +
Sbjct: 427 GSTLFIRNLPFEVTEQELNTLFRSFGPLRYAKITLDKT-TGRSRGTGFVCFWKTEHADKA 485
>gi|326522138|dbj|BAK04197.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 371
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
R S + G KI V +P AK+ ++ F FG + V +P+ GSG HRGFGFV
Sbjct: 224 RGYSGSPQGIGKKIFVGGLPQGAKKDDLRNYFGGFGGVADVFIPRDPKGSG-HRGFGFVT 282
Query: 70 F 70
F
Sbjct: 283 F 283
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+T ++I V IP A +S F+AFGE+ + +PK+ GS HRG GF+ F
Sbjct: 91 KTATRIFVGRIPQSADESMFRRHFEAFGEIIDLYMPKEH-GSKGHRGIGFITF 142
>gi|302036839|ref|YP_003797161.1| RNA-binding protein [Candidatus Nitrospira defluvii]
gi|190343253|gb|ACE75641.1| RNA-binding protein [Candidatus Nitrospira defluvii]
gi|300604903|emb|CBK41236.1| RNA-binding protein [Candidatus Nitrospira defluvii]
Length = 107
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
G+K+ V +P+ A +S++ LF A G ++ R+ +G RGFGFVE T EAK
Sbjct: 2 GNKLYVGGLPYAATESQLSNLFSAHGTVESARVITDKF-TGQSRGFGFVEMSTAEEAK 58
>gi|388581139|gb|EIM21449.1| hypothetical protein WALSEDRAFT_38416, partial [Wallemia sebi CBS
633.66]
Length = 866
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ G + VRNIPF+A Q ++ ++F+ FG+L++ R+ + RG GFV F +A+
Sbjct: 414 EDGLTLFVRNIPFEATQEDLYDVFRKFGKLRYARVTMDY-ETERSRGNGFVAFWNMKDAQ 472
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG-LH-RGFGFVEFITKNEAKR 78
S+++VRN+ F + +++ F FG++ + LP G LH +G+GFV + ++A++
Sbjct: 218 SRLIVRNLNFNITRDDLKATFIPFGDIHSITLPTIEAKDGSLHNKGYGFVWYTFYHDAQK 277
Query: 79 V 79
Sbjct: 278 A 278
>gi|302926157|ref|XP_003054238.1| hypothetical protein NECHADRAFT_102368 [Nectria haematococca mpVI
77-13-4]
gi|256735179|gb|EEU48525.1| hypothetical protein NECHADRAFT_102368 [Nectria haematococca mpVI
77-13-4]
Length = 507
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
G A KR ++ ++ + + V N+PF Q V E F E+ VRLP SG
Sbjct: 337 AGRAADRAKRHGDTLSPESDT-LFVGNLPFDVDQDAVREFFGEVAEVASVRLPTDP-DSG 394
Query: 61 LHRGFGFVEFITKNEAKRV 79
+GFG+V F + +AK V
Sbjct: 395 NLKGFGYVSFNSVEDAKAV 413
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + ++ ++F+ FGEL+FV+L +K +G RG+GFV++ +A+
Sbjct: 227 RLYVGNIHFNLTEDDLRQIFEPFGELEFVQL-QKEPDTGRSRGYGFVQYRDPAQAR 281
>gi|378756564|gb|EHY66588.1| hypothetical protein NERG_00228, partial [Nematocida sp. 1 ERTm2]
Length = 398
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAF-GELKFVRLPKKMVGS 59
+ S + +KR++ N KI+++N+PFQA +SE+ EL G+ +R+P K
Sbjct: 303 LKSADSELKREADNPHML---KIILKNVPFQAGRSELSELITGLIGKEYTLRMPVK--SD 357
Query: 60 GLHRGFGFVEF 70
G HRGF FVE
Sbjct: 358 GTHRGFCFVEM 368
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV+F +A+
Sbjct: 283 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD--DNGRSRGYGFVQFRDAGQAR 336
>gi|260940088|ref|XP_002614344.1| hypothetical protein CLUG_05830 [Clavispora lusitaniae ATCC
42720]
gi|238852238|gb|EEQ41702.1| hypothetical protein CLUG_05830 [Clavispora lusitaniae ATCC
42720]
Length = 222
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
+V RK S K + + V N+ Q ++ + ELF G ++ + LPK + S H+GFG
Sbjct: 2 SVFRKPSEAEKNPHASVYVGNLDPQVSETLLYELFIQAGPVRSLHLPKDRI-SREHQGFG 60
Query: 67 FVEFITKNEAK 77
FVEF T +A
Sbjct: 61 FVEFRTAQDAD 71
>gi|194700364|gb|ACF84266.1| unknown [Zea mays]
Length = 267
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+LVRNIP + + E+ F+ FG ++ V LP+ +G RGFGFVEF+ +A
Sbjct: 40 LLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDY-HTGEPRGFGFVEFVDAYDA 92
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV+F +A+
Sbjct: 283 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD--DNGRSRGYGFVQFRDAGQAR 336
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
I V N+ + Q ++ E+F +G +K V+LP +G RGFGFVE ++NE ++
Sbjct: 3 IYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRE-TGRPRGFGFVEMSSENEEQKA 58
>gi|121591663|ref|ZP_01678901.1| RNA-binding protein [Vibrio cholerae 2740-80]
gi|121546479|gb|EAX56699.1| RNA-binding protein [Vibrio cholerae 2740-80]
Length = 120
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
T + V N+P++A +S V+ELF FGE+ VRL K +G RGFGFV
Sbjct: 30 TTKTLYVGNLPYKANESHVKELFAEFGEVFAVRLMKDK-RTGKRRGFGFV 78
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV+F +A+
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDE--NGRSRGYGFVQFRDAGQAR 331
>gi|194706612|gb|ACF87390.1| unknown [Zea mays]
Length = 269
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+LVRNIP + + E+ F+ FG ++ V LP+ +G RGFGFVEF+ +A
Sbjct: 40 LLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDY-HTGEPRGFGFVEFVDAYDA 92
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV+F +A+
Sbjct: 283 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD--DNGRSRGYGFVQFRDAGQAR 336
>gi|355557536|gb|EHH14316.1| hypothetical protein EGK_00221 [Macaca mulatta]
Length = 270
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AGQKPSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|389626317|ref|XP_003710812.1| U4/U6 snRNA-associated-splicing factor PRP24 [Magnaporthe oryzae
70-15]
gi|351650341|gb|EHA58200.1| U4/U6 snRNA-associated-splicing factor PRP24 [Magnaporthe oryzae
70-15]
gi|440465328|gb|ELQ34654.1| U4/U6 snRNA-associated-splicing factor PRP24 [Magnaporthe oryzae
Y34]
gi|440478482|gb|ELQ59313.1| U4/U6 snRNA-associated-splicing factor PRP24 [Magnaporthe oryzae
P131]
Length = 1133
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
++K+ A G ++ V N+P A ++ ++E+F G ++ VR+ K M G +G GFV
Sbjct: 791 RKKAREGATSEGREVKVANLPLDADEASIKEVFGKIGTVQTVRVLKNMAGRS--KGTGFV 848
Query: 69 EFITKNEAKR 78
+ TK EA +
Sbjct: 849 VYETKEEADQ 858
>gi|373953846|ref|ZP_09613806.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM
18603]
gi|373890446|gb|EHQ26343.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM
18603]
Length = 107
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
KI + +PFQ ++ E+ +F FG +K +R+ K +G +GFGFVE +EAK
Sbjct: 2 KIFIAGLPFQVEEEELTAVFGDFGHVKSLRIVKDRE-TGQSKGFGFVEMTNDDEAK 56
>gi|255725032|ref|XP_002547445.1| hypothetical protein CTRG_01752 [Candida tropicalis MYA-3404]
gi|240135336|gb|EER34890.1| hypothetical protein CTRG_01752 [Candida tropicalis MYA-3404]
Length = 257
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 6 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+TV ++ ++ + + + + NI QA + + ELF FG +K + +PK + H+G+
Sbjct: 2 STVFKRQTDAERNSNASLYFGNIDPQADEILMYELFIQFGPIKSLNMPKDRILK-THQGY 60
Query: 66 GFVEFITKNEAK 77
GFVEF ++AK
Sbjct: 61 GFVEFRNIDDAK 72
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV+F +A+
Sbjct: 282 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD--DNGRSRGYGFVQFRDAGQAR 335
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL++V+L K +G RG+GFV+F +A+
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKD--DNGRSRGYGFVQFRDATQAR 331
>gi|154322853|ref|XP_001560741.1| hypothetical protein BC1G_00769 [Botryotinia fuckeliana B05.10]
gi|347837080|emb|CCD51652.1| similar to polyadenylate-binding protein [Botryotinia fuckeliana]
Length = 790
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K + I V+NIP +A + E ELF+ FG++ L + +G RGFGFV FI A
Sbjct: 238 KANFTNIYVKNIPVEATEEEFRELFEKFGDVTSASLARD-AETGKSRGFGFVNFINHEHA 296
>gi|452848059|gb|EME49991.1| hypothetical protein DOTSEDRAFT_164875 [Dothistroma septosporum
NZE10]
Length = 739
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Query: 21 SKILVRNIPFQAKQS-EVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+K++VRN+P+ K+ ++E++F +FG++K +PKK G GL GFGFV
Sbjct: 148 TKLIVRNLPWSIKRDRDLEKVFLSFGKVKKAYIPKK--GPGLMAGFGFV 194
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S I VRN+PF ++E+ F FG ++ R+ G+ +G GFV F K +A
Sbjct: 307 STIFVRNLPFTCTDEDLEDQFSQFGNTRYARVVMDY-GTERSKGTGFVCFYKKEDA 361
>gi|342878293|gb|EGU79648.1| hypothetical protein FOXB_09931 [Fusarium oxysporum Fo5176]
Length = 759
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S++ VRN+P+ A Q ++ E F+ FG ++ V LP + SG +GF V F + A
Sbjct: 327 SRLFVRNLPYSATQEDLRETFERFGTIEEVHLP--VSNSGTSKGFALVLFTDPSGA 380
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 2 GSEATTVKRKSSNVAKQTG--SKILVRNIPFQAKQSEVEELFKAFGELK 48
G +A +R+ K G +KI+++N+PFQA + ++ LF +G+L+
Sbjct: 710 GHDAAEERRREDKAKKAAGQRTKIIIKNLPFQATKKDIRSLFGTYGQLR 758
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKM----VGSGLHRGFGFVEFITKNEA 76
+ + VRN+ F S + E F++ R+ KM G L GFGFVEF T+++A
Sbjct: 626 TSLFVRNLNFSTSTSRLAEAFQSLDGFVSARVKTKMDPKKPGQTLSMGFGFVEFRTRSQA 685
Query: 77 K 77
+
Sbjct: 686 Q 686
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL++V+L K +G RG+GFV+F +A+
Sbjct: 274 RLYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKD--DNGRSRGYGFVQFRDATQAR 327
>gi|255949670|ref|XP_002565602.1| Pc22g16890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592619|emb|CAP98977.1| Pc22g16890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 724
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 22 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
K++VRN+P+ K+ E + LF++FG++KF LPK+ +G GFGF+ + A+R
Sbjct: 150 KLIVRNLPWSIKEPEDLNVLFRSFGKVKFATLPKR---NGKLSGFGFITMRGRKNAERA 205
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV++ +A+
Sbjct: 285 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD--DTGRSRGYGFVQYRDAGQAR 338
>gi|6502554|gb|AAF14355.1|AF113139_1 nucleolar protein Nop4 [Eremothecium gossypii]
Length = 167
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ VRNIPF A +E+ + F F +K + K GS RGFGFV F +++ +
Sbjct: 19 LFVRNIPFDATDAELTDFFSQFAPIKHAVIVKDNAGS--SRGFGFVSFAVESDTQ 71
>gi|384254104|gb|EIE27578.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 412
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 72
+++ ++G +I V + + +++V+E F FG + V LP+ V HRGFGFV F T
Sbjct: 279 ASIDTRSGPRIFVGKLNKETTENDVKEYFTRFGYVMDVYLPRDKVNRSEHRGFGFVTFET 338
Query: 73 KNEAKRV 79
R+
Sbjct: 339 DGAVLRI 345
>gi|334322651|ref|XP_001371026.2| PREDICTED: RNA binding protein fox-1 homolog 3-like isoform 1
[Monodelphis domestica]
Length = 325
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S N KQ ++ V NIPF+ + ++ ++F FG++ V + GS +GFGFV F
Sbjct: 89 SENTDKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS---KGFGFVTFE 145
Query: 72 TKNEAKR 78
T +A R
Sbjct: 146 TSTDADR 152
>gi|312373745|gb|EFR21436.1| hypothetical protein AND_17061 [Anopheles darlingi]
Length = 609
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
E +T K K +T + ++V +P++ + + E F++FGEL V+L KK +G +
Sbjct: 98 ENSTPKTKRIESRNRTTTDLIVLGLPWKTTEERLREYFESFGELLVVQL-KKDANTGQSK 156
Query: 64 GFGFVEF 70
G+GF+ F
Sbjct: 157 GYGFIRF 163
>gi|126328724|ref|XP_001364432.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Monodelphis
domestica]
Length = 304
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|147782862|emb|CAN61300.1| hypothetical protein VITISV_011315 [Vitis vinifera]
Length = 335
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ G KI V +P +A ++ + F FG + V +PK SG HRGFGFV F A
Sbjct: 213 RAMGKKIFVGRLPQEASAEDLRQYFGRFGRILDVYVPKDPKRSG-HRGFGFVTFAEDGVA 271
Query: 77 KRV 79
RV
Sbjct: 272 DRV 274
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+K++V IP+ + + FGELK V + K+ +G RGFG+V F + +AK
Sbjct: 3 NKLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKER-STGRSRGFGYVTFGSVEDAK 58
>gi|294925396|ref|XP_002778913.1| RNA-binding protein squid, putative [Perkinsus marinus ATCC
50983]
gi|239887759|gb|EER10708.1| RNA-binding protein squid, putative [Perkinsus marinus ATCC
50983]
Length = 297
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R S+ +TG KI + +PF A + +V + F FG + V + V +G RGFGFV
Sbjct: 36 RRSSAERPIRTGPKIFIGGVPFTATEEDVADFFSQFGPVASVEIKMDKV-TGRSRGFGFV 94
Query: 69 EFIT 72
F T
Sbjct: 95 VFET 98
>gi|414878726|tpg|DAA55857.1| TPA: hypothetical protein ZEAMMB73_809994 [Zea mays]
Length = 209
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
++ G KI V +P +A ++ F FG + +PK SG HRGFGFV F +
Sbjct: 73 SQAVGKKIFVGRLPQEANTDDLRHYFGRFGRIVDAYIPKDPKRSG-HRGFGFVTFADEGV 131
Query: 76 AKRV 79
A+RV
Sbjct: 132 AERV 135
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +S+++ +F+ FGEL+FV+L K+ G RG+GFV+F +AK
Sbjct: 310 RLYVGNIHFSITESDLQNVFEPFGELEFVQLQKEE--GGRSRGYGFVQFRDPAQAK 363
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV+F +A+
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDE--NGRSRGYGFVQFRDAGQAR 331
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV+F +A+
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDE--NGRSRGYGFVQFRDAGQAR 331
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ V N+PF A + V ELF G + +RLP SG +GFG+V++ + +EA+
Sbjct: 396 LFVGNLPFDANEDSVGELFGEKGSILGIRLPTD-PDSGRPKGFGYVQYSSVDEAR 449
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
+ AT K K+ + A + + V N+ + ++ ++ F++FGEL VR+ + +G
Sbjct: 267 TSATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTER-DTGRS 325
Query: 63 RGFGFVEFITKNEAKRV 79
RGFG+VE+ +A +
Sbjct: 326 RGFGYVEYTNAVDAAKA 342
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ V N+PF A + V ELF G + +RLP SG +GFG+V++ + +EA+
Sbjct: 399 LFVGNLPFDANEDSVGELFGEKGSILGIRLPTD-PDSGRPKGFGYVQYSSVDEAR 452
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
+ AT K K+ + A + + V N+ + ++ ++ F++FGEL VR+ + +G
Sbjct: 270 TSATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTER-DTGRS 328
Query: 63 RGFGFVEFITKNEAKRV 79
RGFG+VE+ +A +
Sbjct: 329 RGFGYVEYTNAVDAAKA 345
>gi|18410283|ref|NP_567021.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
gi|20466366|gb|AAM20500.1| putative RNA binding protein [Arabidopsis thaliana]
gi|21554261|gb|AAM63336.1| putative RNA binding protein [Arabidopsis thaliana]
gi|22136316|gb|AAM91236.1| putative RNA binding protein [Arabidopsis thaliana]
gi|332645866|gb|AEE79387.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
Length = 262
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+LVRNIP + E+ E F+ FG ++ V +P+ SG RGF FVEF+ +A
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYY-SGQPRGFAFVEFVDAYDA 101
>gi|346971381|gb|EGY14833.1| nucleolar protein [Verticillium dahliae VdLs.17]
Length = 785
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 35/48 (72%), Gaps = 4/48 (8%)
Query: 22 KILVRNIPFQAK-QSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
K+++RN+P+ K ++++ LF+++G++KF LP + +G RGFGFV
Sbjct: 151 KLIIRNLPWSIKTPAQLQALFQSYGKIKFADLP---MNNGRLRGFGFV 195
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV+F +A+
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDE--NGRSRGYGFVQFRDAGQAR 331
>gi|29150367|gb|AAO72376.1| putative RNA binding ribonucleoprotein [Oryza sativa Japonica
Group]
Length = 975
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGFVEFITKNE 75
+ S + V N+P+ K S++E +F G ++ F+ PK GS RGFGFV+F T +
Sbjct: 31 HSPSTVFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAPK---GSETSRGFGFVQFATVQD 87
Query: 76 AKR 78
A+R
Sbjct: 88 AER 90
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 13 SNVAKQTGSKI-----LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
SN+ GSKI +VRN+PF+ E+ ++F G + V +P+K G +GF F
Sbjct: 305 SNLLAIQGSKIRKWRVIVRNLPFKITVKEIMDIFSLAGFIWDVSIPQKS-DDGASKGFAF 363
Query: 68 VEFITKNEAK 77
V F K +A+
Sbjct: 364 VSFTRKQDAE 373
>gi|355693478|gb|EHH28081.1| hypothetical protein EGK_18424 [Macaca mulatta]
gi|355778769|gb|EHH63805.1| hypothetical protein EGM_16846 [Macaca fascicularis]
gi|380808178|gb|AFE75964.1| SRA stem-loop-interacting RNA-binding protein, mitochondrial
precursor [Macaca mulatta]
Length = 109
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 24 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
VR IP+ A S+++E F FG +K +P G+G HRG G+V+F ++ E
Sbjct: 22 FVRKIPWTAASSQLKEYFAQFGHVKRCIVPFDK-GTGFHRGLGWVQFSSEEE 72
>gi|452822102|gb|EME29125.1| RNA-binding protein [Galdieria sulphuraria]
Length = 639
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++VRN+PF + E+ F G +K VRLPK + + G+GFVE+ +A+
Sbjct: 234 VVVRNLPFATSEEELMNTFSKSGPVKLVRLPKNIKYPNVCLGYGFVEYFLPKDAE 288
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
IL+RN+P +S++E F+AFG+++ + K+ +G + G +V FI ++
Sbjct: 357 ILIRNLPLGVHESQIESCFEAFGKIEKCWIDKEK-NTGQNNGLAYVRFIRQH 407
>gi|380791103|gb|AFE67427.1| SRA stem-loop-interacting RNA-binding protein, mitochondrial
precursor, partial [Macaca mulatta]
Length = 87
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 24 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
VR IP+ A S+++E F FG +K +P G+G HRG G+V+F ++ E +
Sbjct: 22 FVRKIPWTAASSQLKEYFAQFGHVKRCIVPFDK-GTGFHRGLGWVQFSSEEELQ 74
>gi|145346140|ref|XP_001417551.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577778|gb|ABO95844.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 92
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+LVRNI F A + ++ + F+A+G + V +PK +G RG FV++ + EA
Sbjct: 3 VLVRNISFDAHEDDIRDKFQAYGNVLDVYMPKDRE-TGRKRGLAFVKYAIQGEAD 56
>gi|432098123|gb|ELK28010.1| TAR DNA-binding protein 43 [Myotis davidii]
Length = 414
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV++ ++A+
Sbjct: 280 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD--DNGRSRGYGFVQYREASQAR 333
>gi|355723255|gb|AES07833.1| TAR DNA binding protein isoform 4 [Mustela putorius furo]
Length = 280
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|126328726|ref|XP_001364580.1| PREDICTED: TAR DNA-binding protein 43-like isoform 4 [Monodelphis
domestica]
Length = 295
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|357635456|ref|ZP_09133334.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|386393392|ref|ZP_10078173.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
gi|357584010|gb|EHJ49343.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|385734270|gb|EIG54468.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
Length = 98
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
K+ V N+PF + E+ ++F A+GE++ V L +G RGFGFVE T+
Sbjct: 4 KLYVGNLPFSTNEDEIRDMFSAYGEVQSVNLIVDRE-TGRLRGFGFVEMTTE 54
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ V N+PF A + V ELF G + +RLP SG +GFG+V++ + +EA+
Sbjct: 398 LFVGNLPFDANEDSVGELFGEKGSILGIRLPTD-PDSGRPKGFGYVQYSSVDEAR 451
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV--GSG 60
+ AT K K+ + A + + V N+ + ++ ++ F++FGEL VR+ M +G
Sbjct: 269 TSATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRI---MTERDTG 325
Query: 61 LHRGFGFVEFITKNEAKRV 79
RGFG+VE+ +A +
Sbjct: 326 RSRGFGYVEYTNAVDAAKA 344
>gi|401408831|ref|XP_003883864.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
gi|325118281|emb|CBZ53832.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
Length = 192
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
TG +L+RN+ F+ V ++F+ FG ++ V LP + RGFGFVEF + A+
Sbjct: 3 TGCSLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHF-TKRPRGFGFVEFYEEAAAQ 60
>gi|194018610|ref|NP_001123392.1| RNA binding motif protein 28 [Xenopus (Silurana) tropicalis]
gi|189442619|gb|AAI67360.1| rbm28 protein [Xenopus (Silurana) tropicalis]
Length = 828
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A VK+ Q +++++RN+ FQ + +++E F FG + + +PKK G RG
Sbjct: 98 AKEVKKPKDARGAQKKARLIIRNLSFQCSEEDLKEHFSNFGYVLEINIPKK--SDGKMRG 155
Query: 65 FGFVEFITKNEAKRV 79
F FV+F EA +
Sbjct: 156 FAFVQFKNMLEASKA 170
>gi|413951342|gb|AFW83991.1| hypothetical protein ZEAMMB73_503439 [Zea mays]
Length = 278
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
++ G KI V +P +A ++ + F FG + +PK SG HRGFGFV F
Sbjct: 140 SQAVGKKIFVGRLPQEANTDDLRQYFGRFGRIVDAYIPKDPKRSG-HRGFGFVTFADDGV 198
Query: 76 AKRV 79
A+RV
Sbjct: 199 AERV 202
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ ++I V IP +S F+AFGE+ + +PK+ GS HRG GF+ F
Sbjct: 7 KKATRIFVARIPQSVDESMFRRHFEAFGEILDLYMPKEH-GSKGHRGIGFITF 58
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ V N+PF A + V ELF G + +RLP SG +GFG+V++ + +EA+
Sbjct: 406 LFVGNLPFDANEDSVGELFGEKGSILGIRLPTD-PDSGRPKGFGYVQYSSVDEAR 459
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMV--GSG 60
+ AT K K+ + A + + V N+ + ++ ++ F++FGEL VR+ M +G
Sbjct: 277 TSATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRI---MTERDTG 333
Query: 61 LHRGFGFVEFITKNEAKRV 79
RGFG+VE+ +A +
Sbjct: 334 RSRGFGYVEYTNAVDAAKA 352
>gi|195624050|gb|ACG33855.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
gi|195644612|gb|ACG41774.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
Length = 360
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
++ G KI V +P +A ++ + F FG + +PK SG HRGFGFV F
Sbjct: 222 SQAVGKKIFVGRLPQEANTDDLRQYFGRFGRIVDAYIPKDPKRSG-HRGFGFVTFADDGV 280
Query: 76 AKRV 79
A+RV
Sbjct: 281 AERV 284
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
+ T K + + + ++I V IP +S F+AFGE+ + +PK+ GS HR
Sbjct: 75 KVATPKEEMKSQGSKKATRIFVARIPQSVDESMFRRHFEAFGEILDLYMPKEH-GSKGHR 133
Query: 64 GFGFVEF 70
G GF+ F
Sbjct: 134 GIGFITF 140
>gi|212723574|ref|NP_001131827.1| uncharacterized protein LOC100193201 [Zea mays]
gi|194692652|gb|ACF80410.1| unknown [Zea mays]
gi|194701144|gb|ACF84656.1| unknown [Zea mays]
gi|224032577|gb|ACN35364.1| unknown [Zea mays]
gi|413951337|gb|AFW83986.1| heterogeneous nuclear ribonucleoprotein 27C isoform 1 [Zea mays]
gi|413951338|gb|AFW83987.1| heterogeneous nuclear ribonucleoprotein 27C isoform 2 [Zea mays]
gi|413951339|gb|AFW83988.1| heterogeneous nuclear ribonucleoprotein 27C isoform 3 [Zea mays]
gi|413951340|gb|AFW83989.1| heterogeneous nuclear ribonucleoprotein 27C isoform 4 [Zea mays]
gi|413951341|gb|AFW83990.1| heterogeneous nuclear ribonucleoprotein 27C isoform 5 [Zea mays]
Length = 360
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
++ G KI V +P +A ++ + F FG + +PK SG HRGFGFV F
Sbjct: 222 SQAVGKKIFVGRLPQEANTDDLRQYFGRFGRIVDAYIPKDPKRSG-HRGFGFVTFADDGV 280
Query: 76 AKRV 79
A+RV
Sbjct: 281 AERV 284
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
+ T K + + + ++I V IP +S F+AFGE+ + +PK+ GS HR
Sbjct: 75 KVATPKEEMKSQGSKKATRIFVARIPQSVDESMFRRHFEAFGEILDLYMPKEH-GSKGHR 133
Query: 64 GFGFVEF 70
G GF+ F
Sbjct: 134 GIGFITF 140
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K++V IP+ + E FG L + K+ SG RGFG+V F + ++AK V
Sbjct: 2 ATKLVVLGIPWDVDTEGLREYMAKFGPLDDCVVMKER-SSGRSRGFGYVTFASADDAKNV 60
>gi|425442381|ref|ZP_18822630.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
gi|389716645|emb|CCH99152.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
Length = 98
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT-KNEAKRV 79
I V N+PF+ Q +V E+FK +GE+K V LP + RGF FVE T + EAK +
Sbjct: 3 IYVGNLPFEVDQEDVVEVFKEYGEIKRVHLPMDRE-TKRKRGFAFVEMETPEQEAKAI 59
>gi|425783198|gb|EKV21057.1| Nucleolin protein Nsr1, putative [Penicillium digitatum Pd1]
Length = 467
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ V N+PF A + + E+F A G + +RLP + +G +GFG+V+F + +EAK
Sbjct: 318 LFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQE-TGRPKGFGYVQFSSIDEAK 371
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
AT K K+ V + + + + N+ + + V+ F FGEL VR+ +G RG
Sbjct: 195 ATAKKSKTEEVPEGAVANLFIGNLSWNVDEEWVQREFSEFGELSGVRIVTDRE-TGRSRG 253
Query: 65 FGFVEF 70
FG+VE+
Sbjct: 254 FGYVEY 259
>gi|443896410|dbj|GAC73754.1| nucleolar protein fibrillarin NOP77 [Pseudozyma antarctica T-34]
Length = 1060
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
A + G+ + VRN+P+QA + E+ LF+ FG L++ ++ + +G GFV F
Sbjct: 590 APEEGTTLFVRNLPYQATEEELRNLFRTFGPLRYAKITMDK-ATNRSKGTGFVCF 643
>gi|344283523|ref|XP_003413521.1| PREDICTED: TAR DNA-binding protein 43 [Loxodonta africana]
Length = 414
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|9843657|emb|CAC03602.1| SC35-like splicing factor SCL30, 30 kD [Arabidopsis thaliana]
Length = 262
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+LVRNIP + E+ E F+ FG ++ V +P+ SG RGF FVEF+ +A
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYY-SGQPRGFAFVEFVDAYDA 101
>gi|115455989|ref|NP_001051595.1| Os03g0801800 [Oryza sativa Japonica Group]
gi|108711601|gb|ABF99396.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550066|dbj|BAF13509.1| Os03g0801800 [Oryza sativa Japonica Group]
gi|215695092|dbj|BAG90283.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625982|gb|EEE60114.1| hypothetical protein OsJ_12988 [Oryza sativa Japonica Group]
Length = 959
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGFVEFITKNE 75
+ S + V N+P+ K S++E +F G ++ F+ PK GS RGFGFV+F T +
Sbjct: 31 HSPSTVFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAPK---GSETSRGFGFVQFATVQD 87
Query: 76 AKR 78
A+R
Sbjct: 88 AER 90
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+++VRN+PF+ E+ ++F G + V +P+K G +GF FV F K +A+
Sbjct: 303 RVIVRNLPFKITVKEIMDIFSLAGFIWDVSIPQKS-DDGASKGFAFVSFTRKQDAE 357
>gi|449460598|ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis
sativus]
gi|449502733|ref|XP_004161727.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis
sativus]
Length = 377
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
G KI V +P +A ++ + F FG + V +PK SG HRGFGFV F A RV
Sbjct: 233 GKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSG-HRGFGFVTFAEDGVADRV 291
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
K++V IP+ + E FGEL+ + K+ +G RGFG+V F T +AK
Sbjct: 4 KLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKER-STGRSRGFGYVTFATDEDAK 58
>gi|400597074|gb|EJP64818.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 769
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 22 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
K++VRN+P+ + SE + LF+++G++KF LPK G +GFGFV K A++
Sbjct: 146 KLIVRNLPWSIRNSEQLGHLFRSYGKVKFADLPK---NKGKLKGFGFVTLRGKKNAEKA 201
>gi|396081852|gb|AFN83466.1| polyadenylate binding protein 2 [Encephalitozoon romaleae SJ-2008]
Length = 411
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
+K+LVRN+PFQA + E+ ++F +F + VR+P K G+ RGF FV + +E
Sbjct: 334 NKLLVRNVPFQASEKEIRKIFDSFHVVD-VRIPIKREGTS--RGFCFVTLGSPDE 385
>gi|361128049|gb|EHL00002.1| putative Polyadenylate-binding protein, cytoplasmic and nuclear
[Glarea lozoyensis 74030]
Length = 783
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K + I V+NIP +A E ELF+ FG++ L + +G RGFGFV FI A
Sbjct: 239 KANFTNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDQ-DTGKSRGFGFVNFINHEHA 297
>gi|125546077|gb|EAY92216.1| hypothetical protein OsI_13935 [Oryza sativa Indica Group]
Length = 960
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGFVEFITKNE 75
+ S + V N+P+ K S++E +F G ++ F+ PK GS RGFGFV+F T +
Sbjct: 31 HSPSTVFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAPK---GSETSRGFGFVQFATVQD 87
Query: 76 AKR 78
A+R
Sbjct: 88 AER 90
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+++VRN+PF+ E+ ++F G + V +P+K G +GF FV F K +A+
Sbjct: 303 RVIVRNLPFKITVKEIMDIFSLAGFIWDVSIPQKSY-DGASKGFAFVSFTRKQDAE 357
>gi|345327668|ref|XP_001515396.2| PREDICTED: TAR DNA-binding protein 43 isoform 2 [Ornithorhynchus
anatinus]
Length = 414
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|345794484|ref|XP_535409.3| PREDICTED: TAR DNA-binding protein 43 [Canis lupus familiaris]
gi|395521863|ref|XP_003765034.1| PREDICTED: TAR DNA-binding protein 43 [Sarcophilus harrisii]
Length = 414
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|119568829|gb|EAW48444.1| hCG1642312, isoform CRA_a [Homo sapiens]
Length = 511
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
A Q S + V +P++ + +++E F FGE+ V++ KK V +G +GFGFV FI
Sbjct: 363 AVQKTSALAVLGLPWKTTEQDLKEYFSTFGEILMVQV-KKDVRTGYSKGFGFVHFI 417
>gi|303282859|ref|XP_003060721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458192|gb|EEH55490.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 93
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+LVRN+P+ A E+ F+ +GE++ V +PK + +GF FVEF EA+
Sbjct: 3 LLVRNLPYDATVEEIRTAFEEYGEVRDVYIPKDY-HTKRPKGFAFVEFPDPREAE 56
>gi|194388816|dbj|BAG61425.1| unnamed protein product [Homo sapiens]
Length = 330
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 7 SSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGHS 60
Query: 63 RGFGFVEF 70
RGFGFV F
Sbjct: 61 RGFGFVRF 68
>gi|428218969|ref|YP_007103434.1| RNP-1 like RNA-binding protein [Pseudanabaena sp. PCC 7367]
gi|427990751|gb|AFY71006.1| RNP-1 like RNA-binding protein [Pseudanabaena sp. PCC 7367]
Length = 88
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
I + N+ +QA Q +VEE+F +G +K V+L +G RGFGFV+ ++E
Sbjct: 3 IYIGNLSYQATQQDVEEIFNDYGSVKRVQLITDRE-TGRMRGFGFVDMSDEDE 54
>gi|401827276|ref|XP_003887730.1| RNA binding domain-containing protein [Encephalitozoon hellem ATCC
50504]
gi|392998737|gb|AFM98749.1| RNA binding domain-containing protein [Encephalitozoon hellem ATCC
50504]
Length = 411
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
Q +K+L+RN+PFQA + E+ +F +F + VR+P K G+ RGF FV + +E
Sbjct: 331 QPINKLLIRNVPFQASEEEIRRMFNSFHVVD-VRIPVKREGTS--RGFCFVTLGSPDE 385
>gi|15640189|ref|NP_229816.1| RNA-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|147675367|ref|YP_001218239.1| RNA-binding protein [Vibrio cholerae O395]
gi|227080393|ref|YP_002808944.1| RNA-binding protein [Vibrio cholerae M66-2]
gi|227116371|ref|YP_002818267.1| RNA-binding protein [Vibrio cholerae O395]
gi|229508433|ref|ZP_04397937.1| RNA-binding protein [Vibrio cholerae BX 330286]
gi|229508886|ref|ZP_04398376.1| RNA-binding protein [Vibrio cholerae B33]
gi|229517000|ref|ZP_04406446.1| RNA-binding protein [Vibrio cholerae RC9]
gi|229606706|ref|YP_002877354.1| RNA-binding protein [Vibrio cholerae MJ-1236]
gi|254851544|ref|ZP_05240894.1| RNA-binding protein [Vibrio cholerae MO10]
gi|255743893|ref|ZP_05417848.1| RNA-binding protein [Vibrio cholera CIRS 101]
gi|298501080|ref|ZP_07010880.1| RNA-binding protein [Vibrio cholerae MAK 757]
gi|360036621|ref|YP_004938384.1| RNA-binding protein [Vibrio cholerae O1 str. 2010EL-1786]
gi|379740051|ref|YP_005332020.1| RNA-binding protein [Vibrio cholerae IEC224]
gi|417811235|ref|ZP_12457902.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-49A2]
gi|417814989|ref|ZP_12461631.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HCUF01]
gi|418330864|ref|ZP_12941826.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-06A1]
gi|418335830|ref|ZP_12944734.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-23A1]
gi|418342399|ref|ZP_12949215.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-28A1]
gi|418347573|ref|ZP_12952314.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-43A1]
gi|418353119|ref|ZP_12955847.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-61A1]
gi|419824624|ref|ZP_14348136.1| RNA recognition motif family protein [Vibrio cholerae CP1033(6)]
gi|421315341|ref|ZP_15765916.1| RNA-binding protein [Vibrio cholerae CP1032(5)]
gi|421318951|ref|ZP_15769514.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1038(11)]
gi|421326457|ref|ZP_15776977.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1042(15)]
gi|421330382|ref|ZP_15780869.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1046(19)]
gi|421337446|ref|ZP_15787905.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1048(21)]
gi|421337889|ref|ZP_15788332.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-20A2]
gi|421348801|ref|ZP_15799176.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-46A1]
gi|422890188|ref|ZP_16932634.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-40A1]
gi|422900985|ref|ZP_16936383.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-48A1]
gi|422905155|ref|ZP_16940030.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-70A1]
gi|422911902|ref|ZP_16946442.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HFU-02]
gi|422924368|ref|ZP_16957428.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-38A1]
gi|423143429|ref|ZP_17131058.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-19A1]
gi|423148411|ref|ZP_17135783.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-21A1]
gi|423152197|ref|ZP_17139422.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-22A1]
gi|423154990|ref|ZP_17142136.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-32A1]
gi|423158855|ref|ZP_17145836.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-33A2]
gi|423163517|ref|ZP_17150327.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-48B2]
gi|423745412|ref|ZP_17711044.1| RNA recognition motif family protein [Vibrio cholerae HC-50A2]
gi|424000702|ref|ZP_17743806.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-17A2]
gi|424004864|ref|ZP_17747863.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-37A1]
gi|424022661|ref|ZP_17762338.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-62B1]
gi|424025680|ref|ZP_17765311.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-69A1]
gi|424585052|ref|ZP_18024660.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1030(3)]
gi|424589426|ref|ZP_18028885.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1037(10)]
gi|424593679|ref|ZP_18033034.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1040(13)]
gi|424597609|ref|ZP_18036822.1| ss-DNA binding 12RNP2 domain protein [Vibrio Cholerae CP1044(17)]
gi|424600383|ref|ZP_18039553.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1047(20)]
gi|424605286|ref|ZP_18044265.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1050(23)]
gi|424615806|ref|ZP_18054512.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-42A1]
gi|424620559|ref|ZP_18059099.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-47A1]
gi|424643376|ref|ZP_18081146.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-56A2]
gi|424651306|ref|ZP_18088843.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-57A2]
gi|440711927|ref|ZP_20892554.1| RNA-binding protein [Vibrio cholerae 4260B]
gi|443502211|ref|ZP_21069215.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-64A1]
gi|443506110|ref|ZP_21072921.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-65A1]
gi|443509945|ref|ZP_21076631.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-67A1]
gi|443513790|ref|ZP_21080347.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-68A1]
gi|443517594|ref|ZP_21084032.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-71A1]
gi|443522182|ref|ZP_21088444.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-72A2]
gi|443529115|ref|ZP_21095137.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-7A1]
gi|443533853|ref|ZP_21099788.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-80A1]
gi|443536674|ref|ZP_21102534.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-81A1]
gi|449054824|ref|ZP_21733492.1| RNA-binding protein [Vibrio cholerae O1 str. Inaba G4222]
gi|9654560|gb|AAF93335.1| RNA-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|146317250|gb|ABQ21789.1| RNA-binding protein [Vibrio cholerae O395]
gi|227008281|gb|ACP04493.1| RNA-binding protein [Vibrio cholerae M66-2]
gi|227011821|gb|ACP08031.1| RNA-binding protein [Vibrio cholerae O395]
gi|229346063|gb|EEO11035.1| RNA-binding protein [Vibrio cholerae RC9]
gi|229354003|gb|EEO18936.1| RNA-binding protein [Vibrio cholerae B33]
gi|229354706|gb|EEO19628.1| RNA-binding protein [Vibrio cholerae BX 330286]
gi|229369361|gb|ACQ59784.1| RNA-binding protein [Vibrio cholerae MJ-1236]
gi|254847249|gb|EET25663.1| RNA-binding protein [Vibrio cholerae MO10]
gi|255738376|gb|EET93766.1| RNA-binding protein [Vibrio cholera CIRS 101]
gi|297540114|gb|EFH76175.1| RNA-binding protein [Vibrio cholerae MAK 757]
gi|340045834|gb|EGR06773.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HCUF01]
gi|340046160|gb|EGR07094.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-49A2]
gi|341626684|gb|EGS52045.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-70A1]
gi|341628269|gb|EGS53532.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-48A1]
gi|341628556|gb|EGS53785.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-40A1]
gi|341642022|gb|EGS66533.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HFU-02]
gi|341649135|gb|EGS73131.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-38A1]
gi|356422963|gb|EHH76426.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-06A1]
gi|356423690|gb|EHH77131.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-21A1]
gi|356427838|gb|EHH81078.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-19A1]
gi|356434650|gb|EHH87827.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-23A1]
gi|356436025|gb|EHH89160.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-22A1]
gi|356438911|gb|EHH91913.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-28A1]
gi|356445605|gb|EHH98408.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-32A1]
gi|356448658|gb|EHI01421.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-43A1]
gi|356451315|gb|EHI04010.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-33A2]
gi|356455632|gb|EHI08273.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-61A1]
gi|356456798|gb|EHI09380.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-48B2]
gi|356647775|gb|AET27830.1| RNA-binding protein [Vibrio cholerae O1 str. 2010EL-1786]
gi|378793561|gb|AFC57032.1| RNA-binding protein [Vibrio cholerae IEC224]
gi|395924086|gb|EJH34895.1| RNA-binding protein [Vibrio cholerae CP1032(5)]
gi|395926493|gb|EJH37276.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1038(11)]
gi|395929069|gb|EJH39820.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1048(21)]
gi|395935991|gb|EJH46725.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1042(15)]
gi|395936380|gb|EJH47105.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1046(19)]
gi|395939212|gb|EJH49895.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-46A1]
gi|395948154|gb|EJH58808.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-20A2]
gi|395965038|gb|EJH75225.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-56A2]
gi|395965237|gb|EJH75416.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-57A2]
gi|395967801|gb|EJH77845.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-42A1]
gi|395977055|gb|EJH86485.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-47A1]
gi|395979699|gb|EJH89037.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1030(3)]
gi|395980070|gb|EJH89373.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1047(20)]
gi|408037730|gb|EKG74109.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1037(10)]
gi|408038629|gb|EKG74961.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1040(13)]
gi|408045872|gb|EKG81640.1| ss-DNA binding 12RNP2 domain protein [Vibrio Cholerae CP1044(17)]
gi|408047667|gb|EKG83237.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1050(23)]
gi|408612599|gb|EKK85934.1| RNA recognition motif family protein [Vibrio cholerae CP1033(6)]
gi|408644944|gb|EKL16614.1| RNA recognition motif family protein [Vibrio cholerae HC-50A2]
gi|408850213|gb|EKL90189.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-37A1]
gi|408850545|gb|EKL90500.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-17A2]
gi|408876314|gb|EKM15442.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-62B1]
gi|408882414|gb|EKM21247.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-69A1]
gi|439972350|gb|ELP48636.1| RNA-binding protein [Vibrio cholerae 4260B]
gi|443433514|gb|ELS76020.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-64A1]
gi|443437352|gb|ELS83448.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-65A1]
gi|443441184|gb|ELS90851.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-67A1]
gi|443444999|gb|ELS98255.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-68A1]
gi|443448769|gb|ELT05383.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-71A1]
gi|443451896|gb|ELT12138.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-72A2]
gi|443460201|gb|ELT27590.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-7A1]
gi|443462984|gb|ELT34000.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-80A1]
gi|443467921|gb|ELT42575.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-81A1]
gi|448265970|gb|EMB03203.1| RNA-binding protein [Vibrio cholerae O1 str. Inaba G4222]
Length = 152
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
T + V N+P++A +S V+ELF FGE+ VRL K +G RGFGFV
Sbjct: 62 TTKTLYVGNLPYKANESHVKELFAEFGEVFAVRLMKDK-RTGKRRGFGFV 110
>gi|338722162|ref|XP_001492915.3| PREDICTED: TAR DNA-binding protein 43 [Equus caballus]
gi|349602995|gb|AEP98963.1| TAR DNA-binding protein 43-like protein [Equus caballus]
Length = 414
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|281349254|gb|EFB24838.1| hypothetical protein PANDA_011802 [Ailuropoda melanoleuca]
Length = 414
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|71894865|ref|NP_001026049.1| TAR DNA-binding protein 43 [Gallus gallus]
gi|82233907|sp|Q5ZLN5.1|TADBP_CHICK RecName: Full=TAR DNA-binding protein 43; Short=TDP-43
gi|53129069|emb|CAG31358.1| hypothetical protein RCJMB04_5g9 [Gallus gallus]
Length = 414
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV++ ++A+
Sbjct: 286 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD--DNGRSRGYGFVQYREASQAR 339
>gi|351713714|gb|EHB16633.1| TAR DNA-binding protein 43 [Heterocephalus glaber]
Length = 414
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|363749721|ref|XP_003645078.1| hypothetical protein Ecym_2541 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888711|gb|AET38261.1| Hypothetical protein Ecym_2541 [Eremothecium cymbalariae
DBVPG#7215]
Length = 675
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ VRNIPF A +E+ + F F LK + K G G RGFGFV F
Sbjct: 18 LFVRNIPFTATDAELTDFFSQFAPLKHAIIVKD--GDGNSRGFGFVSF 63
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
+ +RN+P+ A Q +EE F FG +K+V LP +GL +G F F T+
Sbjct: 284 VFIRNVPYDATQESLEEHFAQFGPVKYV-LPVVDRETGLPKGTAFAAFKTQ 333
>gi|156838778|ref|XP_001643088.1| hypothetical protein Kpol_1029p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156113681|gb|EDO15230.1| hypothetical protein Kpol_1029p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 224
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
I V +P + E+ + F FG+LK VRL + +G R +GFVEF+ K++AK
Sbjct: 97 IYVSRLPHGFHERELSKYFSQFGDLKVVRLARNK-KTGKSRHYGFVEFVNKDDAK 150
>gi|153820611|ref|ZP_01973278.1| RNA-binding protein [Vibrio cholerae NCTC 8457]
gi|126508844|gb|EAZ71438.1| RNA-binding protein [Vibrio cholerae NCTC 8457]
Length = 139
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
T + V N+P++A +S V+ELF FGE+ VRL K +G RGFGFV
Sbjct: 49 TTKTLYVGNLPYKANESHVKELFAEFGEVFAVRLMKDK-RTGKRRGFGFV 97
>gi|45200847|ref|NP_986417.1| AGL250Wp [Ashbya gossypii ATCC 10895]
gi|44985545|gb|AAS54241.1| AGL250Wp [Ashbya gossypii ATCC 10895]
Length = 729
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ VRNIPF A +E+ + F F +K + K GS RGFGFV F +++ +
Sbjct: 18 LFVRNIPFDATDAELTDFFSQFAPIKHAVIVKDNAGSS--RGFGFVSFAVESDTQ 70
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ VRN+P+ A Q +E F FG +K+ LP + +GL +G FV F
Sbjct: 290 VFVRNVPYDATQETLEAHFSKFGPVKYA-LPVQDKETGLPKGTAFVAF 336
>gi|229525051|ref|ZP_04414456.1| RNA-binding protein [Vibrio cholerae bv. albensis VL426]
gi|229338632|gb|EEO03649.1| RNA-binding protein [Vibrio cholerae bv. albensis VL426]
Length = 152
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T+ A T + V N+P++A +S V+ELF +G++ VRL K +G RGFG
Sbjct: 50 TLSSSQDEEASSTTKTLYVGNLPYKANESHVKELFAEYGDVFAVRLMKDK-RTGKRRGFG 108
Query: 67 FV 68
FV
Sbjct: 109 FV 110
>gi|428671713|gb|EKX72628.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 399
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+S + K +I + I F+A + ++EE F FG + P++ S L++GFGF+ F
Sbjct: 112 QSVDEEKINAHRIFITRIAFEATEDDLEEYFSKFGTVHDAYCPRQQNNSNLNKGFGFISF 171
Query: 71 ITKNEAKRV 79
+ ++V
Sbjct: 172 DNEEAIQKV 180
>gi|90074958|dbj|BAE87159.1| unnamed protein product [Macaca fascicularis]
Length = 298
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|402077563|gb|EJT72912.1| U4/U6 snRNA-associated-splicing factor PRP24 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 1143
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
++K+ A G ++ V+N+P A V+ELF +G+++ VR+ + M G +G GFV
Sbjct: 803 QKKAREGATSEGREVKVQNLPSDANDEAVKELFGKYGKIQTVRILRNMAGKS--QGTGFV 860
Query: 69 EFITKN 74
F TK+
Sbjct: 861 VFETKS 866
>gi|374109662|gb|AEY98567.1| FAGL250Wp [Ashbya gossypii FDAG1]
Length = 729
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ VRNIPF A +E+ + F F +K + K GS RGFGFV F +++ +
Sbjct: 18 LFVRNIPFDATDAELTDFFSQFAPIKHAVIVKDNAGSS--RGFGFVSFAVESDTQ 70
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ VRN+P+ A Q +E F FG +K+ LP + +GL +G FV F
Sbjct: 290 VFVRNVPYDATQETLEAHFSKFGPVKYA-LPVQDKETGLPKGTAFVAF 336
>gi|190344642|gb|EDK36359.2| hypothetical protein PGUG_00457 [Meyerozyma guilliermondii ATCC
6260]
Length = 229
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
+V RK ++ + + + V N+ Q ++ + EL F ++ + LPK V SG H+G+G
Sbjct: 3 SVFRKPADADRNVKATLYVGNLDPQVNEALLYELLIQFAPIRSLNLPKDRV-SGTHQGYG 61
Query: 67 FVEF 70
FVEF
Sbjct: 62 FVEF 65
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
+ + S++ V N+ F A + ++ E+F +G +K V +P SG +GFG+VEF
Sbjct: 132 DAPSEPSSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSR-DSGRPKGFGYVEFEDI 190
Query: 74 NEAKRV 79
AK+
Sbjct: 191 ESAKKA 196
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
++ V NI F +++++ +F+ FGEL+FV+L K +G RG+GFV+F
Sbjct: 328 RLYVGNIHFSITETDLQHVFEPFGELEFVQLQKDE--NGRSRGYGFVQF 374
>gi|255715381|ref|XP_002553972.1| KLTH0E11418p [Lachancea thermotolerans]
gi|238935354|emb|CAR23535.1| KLTH0E11418p [Lachancea thermotolerans CBS 6340]
Length = 693
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
+ VRN+P+ A Q +EE F FG +K+ LP + +GL +G FV F +K+
Sbjct: 301 VFVRNVPYDATQESLEEHFGKFGPVKYA-LPVQDKETGLAKGSAFVVFKSKD 351
>gi|308502936|ref|XP_003113652.1| hypothetical protein CRE_26346 [Caenorhabditis remanei]
gi|308263611|gb|EFP07564.1| hypothetical protein CRE_26346 [Caenorhabditis remanei]
Length = 606
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
AK ++++RN+PF+ K+ +++ + A G + LP GFGF++F+ K +
Sbjct: 83 AKTKEWRLIIRNLPFKVKKEDLQNICSAIGPFAEIVLPPSKKDPKTSAGFGFIQFVKKED 142
Query: 76 AKR 78
A++
Sbjct: 143 AEK 145
>gi|350529667|ref|ZP_08908608.1| RNA binding protein [Vibrio rotiferianus DAT722]
Length = 151
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
+ S+A ++ S+ + +T + V N+P++A +S V +LF +G++ VRL K +G
Sbjct: 45 LSSKAPVIQSSDSDPSTKT---LYVGNLPYKANESHVRDLFAEYGQVYAVRLMKDK-RTG 100
Query: 61 LHRGFGFV 68
RGFGFV
Sbjct: 101 KRRGFGFV 108
>gi|322704741|gb|EFY96333.1| U4/U6 snRNA-associated-splicing factor PRP24 [Metarhizium
anisopliae ARSEF 23]
Length = 1052
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
++K+ A G ++ + N+ ++E+ +F+ FG ++ V +P M G +RGF F+
Sbjct: 761 RKKNREGAIAEGREVHISNLDLSTTEAEIRSVFRKFGTVQRVNIPLNMAGK--NRGFAFL 818
Query: 69 EFITKNEAKR 78
+F +K++A++
Sbjct: 819 DFESKDQAEK 828
>gi|302782525|ref|XP_002973036.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
gi|302805506|ref|XP_002984504.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300147892|gb|EFJ14554.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300159637|gb|EFJ26257.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
Length = 93
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ +LVRNI + ++ F+ +G +K V LPK SG RGFGFV+FI +A
Sbjct: 3 TSLLVRNISRDTRADDLRGPFERYGAVKDVYLPKDFY-SGEPRGFGFVQFIDPRDA 57
>gi|449437540|ref|XP_004136550.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449516345|ref|XP_004165207.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 210
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
+ +LVRN+ + ++ LF FG LK + LP+ SG RGFGFV+F+
Sbjct: 37 TSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYY-SGEPRGFGFVQFV 86
>gi|425765515|gb|EKV04192.1| hypothetical protein PDIG_90560 [Penicillium digitatum PHI26]
gi|425783471|gb|EKV21319.1| hypothetical protein PDIP_07480 [Penicillium digitatum Pd1]
Length = 325
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
G +I V N+ + A + +++ELF FG+++ + +K+ G +GFGFV F TK AK
Sbjct: 44 GREIYVSNVAWDASEKDLKELFSKFGDIEKALIERKINGGS--KGFGFVTFATKEAAK 99
>gi|226293059|gb|EEH48479.1| nucleolar protein [Paracoccidioides brasiliensis Pb18]
Length = 691
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%), Gaps = 4/48 (8%)
Query: 22 KILVRNIPFQ-AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
K+++RN+P+ A+ ++E LF++FG++K+ +PKK H GFGFV
Sbjct: 159 KLIIRNLPWSIAEPEQLEVLFRSFGKVKYAVIPKK---GNKHSGFGFV 203
>gi|406674994|ref|ZP_11082185.1| hypothetical protein HMPREF1170_00393 [Aeromonas veronii AMC35]
gi|404628132|gb|EKB24918.1| hypothetical protein HMPREF1170_00393 [Aeromonas veronii AMC35]
Length = 163
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 7 TVKRKSSNVAK----QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
+KR +NVA+ Q + V N+P++A + V ELF G++ VRL K +G
Sbjct: 54 CLKRTPANVAESIANQETCTLYVGNLPYRANEIAVRELFAEQGQVISVRLMKDK-ATGKR 112
Query: 63 RGFGFVEF 70
RGFGFVE
Sbjct: 113 RGFGFVEM 120
>gi|346322022|gb|EGX91621.1| ribosome biogenesis protein Nop4 [Cordyceps militaris CM01]
Length = 818
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 22 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
K++VRN+P+ + SE + LF+++G +KF LPK G +GFGFV K A+
Sbjct: 146 KLIVRNLPWSIRNSEQLGHLFRSYGRIKFADLPKD---KGKLKGFGFVTLRGKKNAE 199
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR--G 64
T +++ N + + I VRN+PF +++ F +FG +++ R+ ++ R G
Sbjct: 303 TKRKEERNNSSDNSTTIFVRNLPFTTNDEKLKSFFSSFGNIRYARV---VMDKATDRPAG 359
Query: 65 FGFVEFITKNEAK 77
FV F +AK
Sbjct: 360 TAFVCFFEGEDAK 372
>gi|339244733|ref|XP_003378292.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972816|gb|EFV56463.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 503
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ G + VR++PF ++E F FG LK+ L + G+ +G GF++F+TK A+
Sbjct: 166 EEGRTLFVRHLPFDVTNDTLKEYFSRFGPLKYA-LVCRYSGTDHSKGTGFIQFLTKEAAQ 224
Query: 78 RV 79
+
Sbjct: 225 KC 226
>gi|428305437|ref|YP_007142262.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428246972|gb|AFZ12752.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 102
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
I V N+ +Q + ++ E+F +G +K V+LP +G RGFGFVE T +E
Sbjct: 3 IYVGNLSYQVTEEDLTEVFAEYGTVKRVQLPTDRE-TGRMRGFGFVEMSTDDE 54
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ + NI F A ++ ++E F ++G + +RLP SG +GFG+++F + +EA+
Sbjct: 372 LFIGNISFGADENAIQETFSSYGTISGIRLPTDPE-SGRPKGFGYIQFSSVDEAR 425
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T K K + + + V N+ + + + F++FGEL VR+ SG RGFG
Sbjct: 251 TKKAKKDSDESNASANLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDR-DSGRSRGFG 309
Query: 67 FVEFITKNEAKRV 79
+VEF +A +
Sbjct: 310 YVEFTNAEDAAKA 322
>gi|424658059|ref|ZP_18095328.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HE-16]
gi|408056787|gb|EKG91659.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HE-16]
Length = 152
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T+ A T + V N+P++A +S V++LF +GE+ VRL K +G RGFG
Sbjct: 50 TLSSSQDEEASSTTKTLYVGNLPYKANESHVKDLFAEYGEVFAVRLMKDK-RTGKRRGFG 108
Query: 67 FV 68
FV
Sbjct: 109 FV 110
>gi|417950456|ref|ZP_12593578.1| RNA-binding protein [Vibrio splendidus ATCC 33789]
gi|342806579|gb|EGU41799.1| RNA-binding protein [Vibrio splendidus ATCC 33789]
Length = 150
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 6 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
++ KS + K + + V N+P++A +S V ELF GE+ VRL K +G RGF
Sbjct: 46 SSTDSKSDSETKASTKTLYVGNLPYKANESHVRELFSEHGEVFAVRLMKDK-RTGKRRGF 104
Query: 66 GFV 68
GFV
Sbjct: 105 GFV 107
>gi|449268445|gb|EMC79309.1| TAR DNA-binding protein 43, partial [Columba livia]
Length = 340
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|425781065|gb|EKV19047.1| Nucleolin protein Nsr1, putative [Penicillium digitatum PHI26]
Length = 537
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ V N+PF A + + E+F A G + +RLP + +G +GFG+V+F + +EAK
Sbjct: 388 LFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQE-TGRPKGFGYVQFSSIDEAK 441
>gi|357478561|ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510621|gb|AES91763.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 192
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
S +LVRN+P A+ ++ F+ +G +K V LP+ +G RGFGFV++
Sbjct: 48 SGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYY-TGEPRGFGFVKY 96
>gi|262166981|ref|ZP_06034699.1| RNA-binding protein [Vibrio cholerae RC27]
gi|421323005|ref|ZP_15773539.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1041(14)]
gi|423889582|ref|ZP_17725082.1| RNA recognition motif family protein [Vibrio cholerae HC-62A1]
gi|424609008|ref|ZP_18047881.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-39A1]
gi|424611920|ref|ZP_18050742.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-41A1]
gi|424655259|ref|ZP_18092572.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-81A2]
gi|262024565|gb|EEY43248.1| RNA-binding protein [Vibrio cholerae RC27]
gi|395925354|gb|EJH36154.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae CP1041(14)]
gi|408011378|gb|EKG49199.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-39A1]
gi|408018322|gb|EKG55777.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-41A1]
gi|408058292|gb|EKG93106.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HC-81A2]
gi|408661241|gb|EKL32233.1| RNA recognition motif family protein [Vibrio cholerae HC-62A1]
Length = 146
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
T + V N+P++A +S V+ELF FGE+ VRL K +G RGFGFV
Sbjct: 56 TTKTLYVGNLPYKANESHVKELFAEFGEVFAVRLMKDK-RTGKRRGFGFV 104
>gi|50421003|ref|XP_459044.1| DEHA2D13112p [Debaryomyces hansenii CBS767]
gi|49654711|emb|CAG87212.1| DEHA2D13112p [Debaryomyces hansenii CBS767]
Length = 719
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 8 VKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
+ RK +N KQ + VRNIP+ A +EE F+ FG +K+ LP SGL +G F
Sbjct: 279 IPRKKNN--KQEAFALFVRNIPYDATPESLEEHFEQFGPVKYA-LPVIDRESGLAKGSAF 335
Query: 68 VEF 70
V F
Sbjct: 336 VAF 338
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ VR+IPF+A SE+EE F F +K + + RGFGFV F
Sbjct: 26 LFVRSIPFEATSSELEEFFSQFVPVKHAVIVNDE--NQKSRGFGFVSF 71
>gi|449282207|gb|EMC89093.1| Protein boule-like protein, partial [Columba livia]
Length = 272
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 15 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
V + T ++I V I F+ K+S++ + F +G +K V++ +G+ +G+GFV F T+
Sbjct: 32 VGRITPNRIFVGGIGFKTKESDLRKFFAQYGSVKEVKIVNDR--AGVSKGYGFVTFETQE 89
Query: 75 EAKRV 79
+A+++
Sbjct: 90 DAQKI 94
>gi|402086828|gb|EJT81726.1| nucleolar protein 4 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 749
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
KR+ + K+++RN+P+ K SE + LFK FG++KF LP G GFGF
Sbjct: 150 KREEEQAENRKAPKLIIRNLPWSIKSSEQLSALFKGFGKVKFADLPN---NKGKLSGFGF 206
Query: 68 V 68
+
Sbjct: 207 I 207
>gi|321472746|gb|EFX83715.1| hypothetical protein DAPPUDRAFT_315633 [Daphnia pulex]
Length = 323
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 24 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEA 76
L RN+ + + E+F +G +K V P + G S LHRGF ++EF T +EA
Sbjct: 167 LTRNV----NKEHINEIFSVYGTIKAVEFPNERAGLSHLHRGFAYIEFSTADEA 216
>gi|448878332|gb|AGE46129.1| arginine/serine-rich splicing factor SCL31 [Sorghum bicolor]
Length = 270
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+LVRNIP + + E+ F+ FG ++ V LP+ +G RGFGFVEF+ +A
Sbjct: 42 LLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDY-HTGEPRGFGFVEFVDAYDA 94
>gi|431906336|gb|ELK10533.1| TAR DNA-binding protein 43 [Pteropus alecto]
Length = 391
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|78183598|ref|YP_376032.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|78167892|gb|ABB24989.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
Length = 196
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
I V N+PF+A+Q +V ELF FGE+ LP + +G RGF FVE
Sbjct: 3 IFVGNLPFRAEQEDVTELFAQFGEVVNCALPLERD-TGRKRGFAFVEM 49
>gi|326932427|ref|XP_003212319.1| PREDICTED: TAR DNA-binding protein 43-like [Meleagris gallopavo]
Length = 414
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|301774739|ref|XP_002922789.1| PREDICTED: TAR DNA-binding protein 43-like [Ailuropoda melanoleuca]
Length = 302
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|237832541|ref|XP_002365568.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma
gondii ME49]
gi|211963232|gb|EEA98427.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma
gondii ME49]
gi|221488019|gb|EEE26233.1| dc50, putative [Toxoplasma gondii GT1]
gi|221508540|gb|EEE34109.1| fuse-binding protein-interacting repressor siahbp1, putative
[Toxoplasma gondii VEG]
Length = 145
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEE-----LFKAFGELKFVRLPKKMVGSGLHRGFGF 67
+++ TG + L R + +VEE F FG++K + +PK +GLHRGFGF
Sbjct: 8 TSLLANTGEERLKRTLYVGGLAEQVEEEVLRAAFLPFGDIKQLEIPKDKT-TGLHRGFGF 66
Query: 68 VEFITKNEAK 77
VEF +++AK
Sbjct: 67 VEFEEEDDAK 76
>gi|357147881|ref|XP_003574527.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Brachypodium distachyon]
Length = 459
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 18 QTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
QT SK+L +RN+P++A + E+ EL K FG R+ M G +R FVEF +N+A
Sbjct: 12 QTPSKVLHLRNMPWEATEEELVELCKPFG-----RVVNTMCNVGANRNQAFVEFADQNQA 66
>gi|224079936|ref|XP_002186638.1| PREDICTED: TAR DNA-binding protein 43 [Taeniopygia guttata]
Length = 414
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|385305083|gb|EIF49077.1| nucleolar protein [Dekkera bruxellensis AWRI1499]
Length = 491
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
I +RN+P+ A Q +EE FK G++K+ LP +GL +G FV F K
Sbjct: 33 IFIRNLPYDATQEALEEHFKKLGDIKYA-LPVMDKETGLAKGTAFVAFENK 82
>gi|169616941|ref|XP_001801885.1| hypothetical protein SNOG_11646 [Phaeosphaeria nodorum SN15]
gi|160703294|gb|EAT80690.2| hypothetical protein SNOG_11646 [Phaeosphaeria nodorum SN15]
Length = 1254
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+K A G ++ V ++ F+ K+ E+ + F FG ++ ++LP K G G +RG+ FV
Sbjct: 970 KKKRESAITEGREVYVWHLNFKVKEREINDAFSRFGTIERIKLPLK--GHGNNRGYCFVN 1027
Query: 70 FITKNEA 76
F TK A
Sbjct: 1028 FKTKESA 1034
>gi|6019464|gb|AAC64372.2| polyadenylate-binding protein 1 [Leishmania major]
Length = 560
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEA 76
G+ + VRN + +++ ELFK +GE+K R+ MV SG+ RGFGFV F +EA
Sbjct: 306 GNNLYVRNFDPEFTGADLLELFKEYGEVKSCRV---MVSESGVSRGFGFVSFSNADEA 360
>gi|78211572|ref|YP_380351.1| RNA recognition motif-containing protein [Synechococcus sp.
CC9605]
gi|78196031|gb|ABB33796.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. CC9605]
Length = 173
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
I V N+PF+A+Q +V ELF FGE+ LP + +G RGF F+E ++
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERD-TGRKRGFAFIEMADES 53
>gi|37521895|ref|NP_925272.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35212894|dbj|BAC90267.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 101
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
I V N+PF A + E+ E F +GE+K V++P SG RGF FV+
Sbjct: 3 IFVGNLPFSATEQEIAEAFAEYGEVKSVKIPTDR-ESGRPRGFAFVD 48
>gi|33864553|ref|NP_896112.1| RNA recognition motif-containing protein [Synechococcus sp. WH
8102]
gi|33632076|emb|CAE06529.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. WH 8102]
Length = 214
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
I V N+PF+A+Q +V ELF FGE+ LP + +G RGF FVE +
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVANCALPLER-DTGRKRGFAFVEMADE 52
>gi|257092637|ref|YP_003166278.1| RNP-1 like RNA-binding protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045161|gb|ACV34349.1| RNP-1 like RNA-binding protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 88
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
I V N+ + ++E+ +LFKAFG++K V++ ++M SG+ +GFGFVE K
Sbjct: 3 IFVGNLAAETTETELTDLFKAFGQVKSVQVMREMF-SGVSKGFGFVEMPGK 52
>gi|428182346|gb|EKX51207.1| hypothetical protein GUITHDRAFT_134710 [Guillardia theta CCMP2712]
Length = 534
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ VRNIP +A EV+E F+ FG++K +L +G H+G F+++
Sbjct: 128 VFVRNIPLEASDQEVKETFRRFGKIKLCKLVLDK-ATGKHKGTAFIQY 174
>gi|320165677|gb|EFW42576.1| RNA binding domain-containing protein 28 [Capsaspora owczarzaki
ATCC 30864]
Length = 838
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 72
+++VRN+PF + ++E+ F+ +G +K + LP K G L +GF FV+F
Sbjct: 72 RLIVRNLPFNVTRLDIEKAFRKYGPIKEIALPLKPDGVQL-KGFAFVQFTN 121
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
G + +RN+ + + ++E FK FG + + R+ +GL +G GFV+F +K+ A +
Sbjct: 265 GQTVFIRNLAYDTDEEALQERFKEFGPISYTRICYN-ADNGLSKGVGFVQFKSKDGADKC 323
>gi|224030865|gb|ACN34508.1| unknown [Zea mays]
gi|414878724|tpg|DAA55855.1| TPA: heterogeneous nuclear ribonucleoprotein 27C isoform 1 [Zea
mays]
gi|414878725|tpg|DAA55856.1| TPA: heterogeneous nuclear ribonucleoprotein 27C isoform 2 [Zea
mays]
Length = 360
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
++ G KI V +P +A ++ F FG + +PK SG HRGFGFV F +
Sbjct: 222 SQAVGKKIFVGRLPQEANTDDLRHYFGRFGRIVDAYIPKDPKRSG-HRGFGFVTFADEGV 280
Query: 76 AKRV 79
A+RV
Sbjct: 281 AERV 284
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T K + + + ++I V IP +S F+AFGE+ + +PK+ GS HRG G
Sbjct: 78 TPKEEMKSQGTKKATRIFVARIPQSVDESMFRRHFEAFGEILDLYMPKEH-GSKGHRGIG 136
Query: 67 FVEF 70
F+ F
Sbjct: 137 FITF 140
Score = 34.3 bits (77), Expect = 10.0, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K++V IP+ + E FG L + K+ SG RGFG+V F + ++AK V
Sbjct: 2 ATKLVVLGIPWDVDTEGLREYMAKFGPLDDCVVMKER-SSGRSRGFGYVTFASADDAKNV 60
>gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223527045|gb|EEF29231.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 265
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+Q +LVRNIP + E+ F+ FG ++ V +PK +G RGF FV+F+ +A
Sbjct: 39 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYIPKDYY-TGEPRGFAFVQFVDTYDA 97
>gi|119494703|ref|XP_001264168.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
gi|119412330|gb|EAW22271.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
Length = 566
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +++++ +F+ FGEL+FV+L K G +G+GFV+F N+A+
Sbjct: 276 RLYVGNIHFSITENDLQNVFEPFGELEFVQLQKDEAGRS--KGYGFVQFRDPNQAR 329
>gi|70996384|ref|XP_752947.1| RNA splicing factor (Pad-1) [Aspergillus fumigatus Af293]
gi|66850582|gb|EAL90909.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus Af293]
gi|159131701|gb|EDP56814.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus A1163]
Length = 566
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
++ V NI F +++++ +F+ FGEL+FV+L K G +G+GFV+F N+A+
Sbjct: 276 RLYVGNIHFSITENDLQNVFEPFGELEFVQLQKDEAGRS--KGYGFVQFRDPNQAR 329
>gi|406988412|gb|EKE08420.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 123
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
Q K+ V N+ F A + +V ELF ++GE++ V++ SG RGF FV T +EA
Sbjct: 3 QQNQKLYVGNLNFDASEDQVRELFGSYGEVQEVKIIMDRF-SGRSRGFAFVRMATADEA 60
>gi|390344256|ref|XP_783689.3| PREDICTED: RNA-binding protein 28-like [Strongylocentrotus
purpuratus]
Length = 622
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
Q G + +RN+P+ + ++ +LF FGEL+F R+ + + RG FV+F K +A
Sbjct: 192 QEGKTLFIRNVPYDSTDDDIRDLFAPFGELEFARVVVDPM-TEHSRGTAFVKFKRKEDA 249
>gi|118486193|gb|ABK94939.1| unknown [Populus trichocarpa]
Length = 590
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 3 SEATTVKRKSSNVAKQ-TGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
S+ T K + VA + TGSK L V N+ FQ ++++VE FK GE+ VR +
Sbjct: 320 SDVKTPKTPVTPVAHENTGSKTLFVGNLSFQVERADVENFFKGAGEVADVRF--ALDADE 377
Query: 61 LHRGFGFVEFITKNEAKRV 79
RGFG VEF T A++
Sbjct: 378 RFRGFGHVEFTTAEAAQKA 396
>gi|281211929|gb|EFA86091.1| hypothetical protein PPL_01328 [Polysphondylium pallidum PN500]
Length = 923
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG---LHRGFGFVEFITKNEAK 77
+++RN+ F + S V E FK FG++ +V++P K +G + +GF FV F +++ A+
Sbjct: 246 LVIRNLNFTSNISHVNESFKKFGQILWVKVPTKQTDAGNQQVSKGFAFVLFSSRDSAQ 303
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR--GFGFVEFITKNEA 76
G + +RN+ F Q ++E+ F FG+LKF RL ++ + G FV+++ +N A
Sbjct: 478 GKTLFIRNVSFDTTQEDLEKKFSEFGKLKFCRL---VLDPTTEKPTGKAFVKYLAENSA 533
>gi|359480888|ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform
1 [Vitis vinifera]
gi|359480890|ref|XP_003632540.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform
2 [Vitis vinifera]
gi|296082418|emb|CBI21423.3| unnamed protein product [Vitis vinifera]
Length = 359
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ G KI V +P +A ++ + F FG + V +PK SG HRGFGFV F A
Sbjct: 220 RAMGKKIFVGRLPQEASAEDLRQYFGRFGRILDVYVPKDPKRSG-HRGFGFVTFAEDGVA 278
Query: 77 KRV 79
RV
Sbjct: 279 DRV 281
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K++V IP+ + + FGELK V + K+ +G RGFG+V F + +AK+V
Sbjct: 3 NKLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKER-STGRSRGFGYVTFGSVEDAKKV 60
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 72
++I V IP ++ F+ +GE+ + +PK GS HRG GF+ F +
Sbjct: 92 TRIFVARIPDSVNEAAFRSYFETYGEITDLYMPKDH-GSKGHRGIGFITFAS 142
>gi|389595349|ref|XP_003722897.1| polyadenylate-binding protein 1 [Leishmania major strain Friedlin]
gi|323364125|emb|CBZ13132.1| polyadenylate-binding protein 1 [Leishmania major strain Friedlin]
Length = 560
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-SGLHRGFGFVEFITKNEA 76
G+ + VRN + +++ ELFK +GE+K R+ MV SG+ RGFGFV F +EA
Sbjct: 306 GNNLYVRNFDPEFTGADLLELFKEYGEVKSCRV---MVSESGVSRGFGFVSFSNADEA 360
>gi|88808896|ref|ZP_01124405.1| RNA-binding protein RbpD [Synechococcus sp. WH 7805]
gi|88786838|gb|EAR17996.1| RNA-binding protein RbpD [Synechococcus sp. WH 7805]
Length = 115
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
I + N+ FQA+Q ++ +LF +GE+K LP +G RGFGFVE + + ++
Sbjct: 3 IYIGNLSFQAEQEDLLDLFSQYGEVKSASLPLDR-ETGRKRGFGFVEMNSDQDEQKA 58
>gi|449478802|ref|XP_002192914.2| PREDICTED: RNA binding protein fox-1 homolog 3 [Taeniopygia
guttata]
Length = 316
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S N KQ ++ V NIPF+ + ++ ++F FG++ V + GS +GFGFV F
Sbjct: 120 SDNTDKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS---KGFGFVTFE 176
Query: 72 TKNEAKR 78
T +A R
Sbjct: 177 TSTDADR 183
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
K+ V N+ F ++ + E+F+AFG ++ V+LP + SG +GFGFV+F AK
Sbjct: 332 KLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLE-SGHCKGFGFVQFAHLEHAK 386
>gi|421352981|ref|ZP_15803320.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HE-45]
gi|395956777|gb|EJH67370.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HE-45]
Length = 152
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
T + V N+P++A +S V+ELF +GE+ VRL K +G RGFGFV
Sbjct: 62 TTKTLYVGNLPYKANESHVKELFAEYGEVFAVRLMKDK-RTGKRRGFGFV 110
>gi|407071357|ref|ZP_11102195.1| RNA-binding protein [Vibrio cyclitrophicus ZF14]
Length = 150
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 6 TTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
++ KS + K + + V N+P++A +S V ELF GE+ VRL K +G RGF
Sbjct: 46 SSTDSKSDSEPKASTKTLYVGNLPYKANESHVRELFSEHGEVFAVRLMKDK-RTGKRRGF 104
Query: 66 GFV 68
GFV
Sbjct: 105 GFV 107
>gi|348571399|ref|XP_003471483.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Cavia
porcellus]
Length = 304
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
+ T + S+N + ++ V NI F + +++ +F+ FGEL+FV+L K+ G R
Sbjct: 260 QVRTAEPASNNPNQIPFHRLYVGNIHFSITEGDLQNVFEPFGELEFVQLQKE--DQGRSR 317
Query: 64 GFGFVEFITKNEAK 77
G+GFV+F ++A+
Sbjct: 318 GYGFVQFRDPHQAR 331
>gi|260435624|ref|ZP_05789594.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|260413498|gb|EEX06794.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 190
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
I V N+PF+A+Q +V ELF FGE+ LP + +G RGF F+E ++
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLER-DTGRKRGFAFIEMADES 53
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
K+ V N+ F ++ + E+F+AFG ++ V+LP + SG +GFGFV+F AK
Sbjct: 332 KLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLE-SGHCKGFGFVQFAHLEHAK 386
>gi|115489208|ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|77556878|gb|ABA99674.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649598|dbj|BAF30110.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|215694562|dbj|BAG89555.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617335|gb|EEE53467.1| hypothetical protein OsJ_36595 [Oryza sativa Japonica Group]
Length = 263
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+Q +LVRNIP + ++ F+ FG ++ V LPK SG RGF FVEF+ +A
Sbjct: 33 EQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYY-SGEPRGFAFVEFVDPYDA 91
>gi|167999759|ref|XP_001752584.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696115|gb|EDQ82455.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 380
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
G+KI V +P +A ++ F FG + V +PK + HRGFGFV F + A+RV
Sbjct: 235 GTKIFVGRLPPEANAEDLRRYFNNFGRISDVYVPKDAKKTS-HRGFGFVTFSDEGAAERV 293
>gi|357144688|ref|XP_003573380.1| PREDICTED: uncharacterized protein LOC100836665 isoform 2
[Brachypodium distachyon]
Length = 557
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 9 KRKSSNVAKQTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
K +SN ++ TGSK L + N+PF A+ +V+E F GE+ VRL G +G+
Sbjct: 279 KTPASNQSQGTGSKTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRL--ATHEDGHPKGYAH 336
Query: 68 VEFITKNEAKR 78
VEF T +AK+
Sbjct: 337 VEFATAEDAKK 347
>gi|330827754|ref|YP_004390706.1| RNA-binding protein [Aeromonas veronii B565]
gi|328802890|gb|AEB48089.1| RNA-binding protein [Aeromonas veronii B565]
Length = 154
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 8 VKRKSSNVAK----QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
+KR +NVA+ Q + V N+P++A + V ELF G++ VRL K +G R
Sbjct: 46 LKRTPANVAESIANQETCTLYVGNLPYRANEIAVRELFAEQGQVISVRLMKDK-ATGKRR 104
Query: 64 GFGFVEF 70
GFGFVE
Sbjct: 105 GFGFVEM 111
>gi|313225077|emb|CBY20870.1| unnamed protein product [Oikopleura dioica]
gi|313245842|emb|CBY34831.1| unnamed protein product [Oikopleura dioica]
Length = 272
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 5 ATTVKRKSSNVA-KQTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
+T++K + S A T SK L V NIPF+ ++ ++ E+F+ FG++ V + GS
Sbjct: 112 STSIKSEDSKKASNNTESKRLHVSNIPFRFREPDLREMFEKFGKITEVEIIFNDRGS--- 168
Query: 63 RGFGFVEFITKNEAKR 78
+GFGFV + K++A R
Sbjct: 169 KGFGFVSYADKDDADR 184
>gi|224096554|ref|XP_002310655.1| predicted protein [Populus trichocarpa]
gi|222853558|gb|EEE91105.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 3 SEATTVKRKSSNVAKQ-TGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
S+ T K + VA + TGSK L V N+ FQ ++++VE FK GE+ VR +
Sbjct: 278 SDVKTPKTPVTPVAHENTGSKTLFVGNLSFQVERADVENFFKGAGEVADVRF--ALDADE 335
Query: 61 LHRGFGFVEFITKNEAKRV 79
RGFG VEF T A++
Sbjct: 336 RFRGFGHVEFTTAEAAQKA 354
>gi|378732360|gb|EHY58819.1| nucleolin, variant [Exophiala dermatitidis NIH/UT8656]
gi|378732361|gb|EHY58820.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 1283
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
R+ K G + V +PF+A ++E+ F +G+L +RLP +RG F+
Sbjct: 994 RQPRAEKKNDGRTVFVGQLPFKATTEDIEKSFSRYGKLDHIRLPHDPKNKSRNRGIAFIT 1053
Query: 70 FITKNEAK 77
F + EA+
Sbjct: 1054 FARQEEAE 1061
>gi|281354469|gb|EFB30053.1| hypothetical protein PANDA_016046 [Ailuropoda melanoleuca]
Length = 91
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 24 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
VR IP+ A SE+ E F FG ++ +P +G HRG G+V+F ++ E K V
Sbjct: 22 FVRKIPWTAASSELREHFAQFGHVRKCTVPFDK-ETGFHRGMGWVQFSSEEELKNV 76
>gi|72383177|ref|YP_292532.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL2A]
gi|72003027|gb|AAZ58829.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL2A]
Length = 250
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
I V N+PF+A+Q +V ELF FGE+ LP + +G RGF FVE
Sbjct: 3 IFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLER-DTGRKRGFAFVE 48
>gi|410921966|ref|XP_003974454.1| PREDICTED: ribonucleoprotein PTB-binding 2-like [Takifugu rubripes]
Length = 872
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 6 TTVKRKSSNVAKQ-TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
+TV+ + NVA Q T S + + N+P E EEL +A+G ++ L + +G +G
Sbjct: 134 STVRGRLINVALQPTDSLLCLTNLPHTFTAQEFEELVRAYGNIERSFLVYSEL-TGHSKG 192
Query: 65 FGFVEFITKNEAKR 78
+GFVE++ K+ A R
Sbjct: 193 YGFVEYMKKDSASR 206
>gi|242072089|ref|XP_002451321.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
gi|241937164|gb|EES10309.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
Length = 270
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+LVRNIP + + E+ F+ FG ++ V LP+ +G RGFGFVEF+ +A
Sbjct: 42 LLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDY-HTGEPRGFGFVEFVDAYDA 94
>gi|124024725|ref|YP_001013841.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL1A]
gi|123959793|gb|ABM74576.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL1A]
Length = 250
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
I V N+PF+A+Q +V ELF FGE+ LP + +G RGF FVE
Sbjct: 3 IFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLER-DTGRKRGFAFVE 48
>gi|258626054|ref|ZP_05720909.1| RNA-binding protein [Vibrio mimicus VM603]
gi|258581674|gb|EEW06568.1| RNA-binding protein [Vibrio mimicus VM603]
Length = 151
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
T + V N+P++A +S V+ELF +GE+ VRL K +G RGFGFV
Sbjct: 61 TTKTLYVGNLPYKANESHVKELFAEYGEVFAVRLMKDK-RTGKRRGFGFV 109
>gi|225449547|ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258210 [Vitis vinifera]
Length = 276
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+Q +LVRNIP + ++ F+ FG ++ V LPK +G RGF FV+F+ EA
Sbjct: 36 EQNHGSLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYY-TGEPRGFAFVQFVDPYEA 94
>gi|89273975|emb|CAJ81490.1| RNA binding motif protein 19 [Xenopus (Silurana) tropicalis]
Length = 261
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ ELF AFG L L K G R FGF+ F+++ EAK
Sbjct: 2 SRLIVKNLPNGIKEDRFRELFAAFGTLTDCSL--KYTKDGKFRKFGFIGFVSEEEAK 56
>gi|323510053|dbj|BAJ77920.1| cgd3_4150 [Cryptosporidium parvum]
Length = 747
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
G ++VRNIPF + V+ F G +K V +P + +G RGF VEF
Sbjct: 627 GPSVIVRNIPFSSDDESVKSFFNGCGVVKRVSIP-RYSDTGKMRGFAMVEF 676
>gi|258622813|ref|ZP_05717830.1| RNA-binding protein [Vibrio mimicus VM573]
gi|424810794|ref|ZP_18236135.1| RNA-binding protein [Vibrio mimicus SX-4]
gi|258584874|gb|EEW09606.1| RNA-binding protein [Vibrio mimicus VM573]
gi|342322166|gb|EGU17960.1| RNA-binding protein [Vibrio mimicus SX-4]
Length = 151
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
T + V N+P++A +S V+ELF +GE+ VRL K +G RGFGFV
Sbjct: 61 TTKTLYVGNLPYKANESHVKELFAEYGEVFAVRLMKDK-RTGKRRGFGFV 109
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A VK+++++ A S + V N+ + + + F++FGEL VR+ SG RG
Sbjct: 248 AKKVKKETADEASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDR-DSGRSRG 306
Query: 65 FGFVEFITKNEAKRV 79
FG+VEF +A +
Sbjct: 307 FGYVEFTNAEDASKA 321
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ + NI F A ++ V+E F + G + +RLP SG +GFG+V+F + +EA+
Sbjct: 371 LFIGNISFNADENAVQETFSSHGSILGIRLPTDPE-SGRPKGFGYVQFSSVDEAR 424
>gi|301781973|ref|XP_002926397.1| PREDICTED: SRA stem-loop-interacting RNA-binding protein,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 111
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 24 LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
VR IP+ A SE+ E F FG ++ +P +G HRG G+V+F ++ E K V
Sbjct: 22 FVRKIPWTAASSELREHFAQFGHVRKCTVPFDK-ETGFHRGMGWVQFSSEEELKNV 76
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A VK+++++ A S + V N+ + + + F++FGEL VR+ SG RG
Sbjct: 246 AKKVKKETADEASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDR-DSGRSRG 304
Query: 65 FGFVEFITKNEAKRV 79
FG+VEF +A +
Sbjct: 305 FGYVEFTNAEDASKA 319
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ + NI F A ++ V+E F + G + +RLP SG +GFG+V+F + +EA+
Sbjct: 369 LFIGNISFNADENAVQETFSSHGSILGIRLPTDPE-SGRPKGFGYVQFSSVDEAR 422
>gi|348571401|ref|XP_003471484.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Cavia
porcellus]
Length = 295
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|217074842|gb|ACJ85781.1| unknown [Medicago truncatula]
Length = 346
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 3 SEATTVKRKSSNVAKQTGS--KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
S A+ V S N+ +G ++ V N+ ++++ +F+AFG+++ V++P +G
Sbjct: 52 STASVVNGPSGNLGPYSGGARRLYVGNLHSSITEADLRRVFEAFGQVELVQMPLDDIGH- 110
Query: 61 LHRGFGFVEFITKNEAK 77
+GFGFV+F +AK
Sbjct: 111 -CKGFGFVQFARLEDAK 126
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ + + + + ++ F FGE+ VRLPK+ + SG +GFG+VEF++++ A +
Sbjct: 497 LFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKE-IDSGRPKGFGYVEFVSQDNAAKA 552
>gi|449146786|ref|ZP_21777547.1| RNA-binding protein [Vibrio mimicus CAIM 602]
gi|449077565|gb|EMB48538.1| RNA-binding protein [Vibrio mimicus CAIM 602]
Length = 151
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
T + V N+P++A +S V+ELF +GE+ VRL K +G RGFGFV
Sbjct: 61 TTKTLYVGNLPYKANESHVKELFAEYGEVFAVRLMKDK-RTGKRRGFGFV 109
>gi|357110649|ref|XP_003557129.1| PREDICTED: RNA-binding protein 28-like [Brachypodium distachyon]
Length = 958
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGFVEFITKNE 75
T S + V N+P+ K S++E +F G ++ F+ K GS RGFGFV+F T +
Sbjct: 30 HTPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASK---GSDTSRGFGFVQFATVQD 86
Query: 76 AKRV 79
A+R
Sbjct: 87 AERA 90
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+++VRN+PF+ E+ ++F + G + V +P+K G +GF FV F K +A+
Sbjct: 282 RVIVRNLPFKITLKEIMDVFSSEGFVWDVSIPQKS-DDGKSKGFAFVSFTRKQDAE 336
>gi|148239850|ref|YP_001225237.1| RNA-binding protein [Synechococcus sp. WH 7803]
gi|147848389|emb|CAK23940.1| RNA-binding protein, RRM domain [Synechococcus sp. WH 7803]
Length = 116
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
I + N+ FQA+Q ++ +LF +GE+K LP +G RGFGFVE + + ++
Sbjct: 3 IYIGNLSFQAEQEDLLDLFSQYGEVKSASLPLDR-ETGRKRGFGFVEMNSDEDEQKA 58
>gi|116071793|ref|ZP_01469061.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
gi|116065416|gb|EAU71174.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
Length = 229
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
R + NV+ I V N+PF+A+Q +V ELF FGE+ LP + +G RGF FVE
Sbjct: 26 RSTQNVS------IFVGNLPFRAEQEDVTELFAQFGEVVNCALPLER-DTGRKRGFAFVE 78
>gi|444728185|gb|ELW68649.1| TAR DNA-binding protein 43 [Tupaia chinensis]
Length = 468
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 145 SSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGHS 198
Query: 63 RGFGFVEF 70
+GFGFV F
Sbjct: 199 KGFGFVRF 206
>gi|410995212|gb|AFV96677.1| rnp-1 like RNA-binding protein [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 90
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
++I V NIP+ ++++++LF +GE+ V+ +G RGFGFVE ++EA +
Sbjct: 2 TQIYVGNIPYGKDENDLKDLFGQYGEVSSVKFVNDKE-TGRFRGFGFVEMANQDEANKA 59
>gi|350596610|ref|XP_003361409.2| PREDICTED: TAR DNA-binding protein 43-like, partial [Sus scrofa]
Length = 259
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 11 SSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDIKTGHS 64
Query: 63 RGFGFVEF 70
+GFGFV F
Sbjct: 65 KGFGFVRF 72
>gi|126644829|ref|XP_001388131.1| cutinase negative acting protein [Cryptosporidium parvum Iowa II]
gi|126117359|gb|EAZ51459.1| cutinase negative acting protein, putative [Cryptosporidium parvum
Iowa II]
Length = 711
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
G ++VRNIPF + V+ F G +K V +P + +G RGF VEF
Sbjct: 591 GPSVIVRNIPFSSDDESVKSFFNGCGVVKRVSIP-RYSDTGKMRGFAMVEF 640
>gi|407923520|gb|EKG16590.1| hypothetical protein MPH_06171 [Macrophomina phaseolina MS6]
Length = 759
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAK-QSEVEELFKAFGELKFVRLPKKMVGSG 60
G A K++ + SK+++RN+P+ K + E+ +LF ++G++K LPKK +G
Sbjct: 143 GKVAQEAKQRKQEQMHPSQSKLIIRNLPWSIKTEEELTKLFLSYGKVKKAILPKK--SNG 200
Query: 61 LHRGFGFVEFITKNEAKRV 79
+ G+GFV K A+R
Sbjct: 201 MLAGYGFVTLRGKKNAERA 219
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 19 TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+ S + +RN+PF ++EE F+ FG +++ R+ +G +G GFV F + +A
Sbjct: 319 SNSTLFIRNLPFTCTDEDLEEHFEQFGGVRYARVVMDRA-TGKPKGTGFVCFFKEEDA 375
>gi|168067843|ref|XP_001785814.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662538|gb|EDQ49378.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 382
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
G+KI V +P +A ++ F FG + V +PK + HRGFGFV F + A+RV
Sbjct: 230 GTKIFVGRLPPEANAEDLRRYFNNFGRISDVYVPKDAKKTS-HRGFGFVTFSDEGAAERV 288
>gi|116073022|ref|ZP_01470284.1| RNA-binding protein RbpD [Synechococcus sp. RS9916]
gi|116068327|gb|EAU74079.1| RNA-binding protein RbpD [Synechococcus sp. RS9916]
Length = 107
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
I + N+ FQA+Q ++ +LF +GE+K LP +G RGFGFVE + + ++
Sbjct: 3 IYIGNLSFQAEQEDLLDLFSQYGEVKSASLPLDR-ETGRKRGFGFVEMSSDADEQKA 58
>gi|423202915|ref|ZP_17189493.1| hypothetical protein HMPREF1167_03076 [Aeromonas veronii AER39]
gi|423211573|ref|ZP_17198106.1| hypothetical protein HMPREF1169_03624 [Aeromonas veronii AER397]
gi|404613232|gb|EKB10265.1| hypothetical protein HMPREF1169_03624 [Aeromonas veronii AER397]
gi|404614171|gb|EKB11174.1| hypothetical protein HMPREF1167_03076 [Aeromonas veronii AER39]
Length = 163
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 8 VKRKSSNVAK----QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
+KR +NVA+ Q + V N+P++A + V ELF G++ VRL K +G R
Sbjct: 55 LKRTPANVAESIANQETCTLYVGNLPYRANEIAVRELFAEQGQVISVRLMKDK-ATGKRR 113
Query: 64 GFGFVEF 70
GFGFVE
Sbjct: 114 GFGFVEM 120
>gi|47222165|emb|CAG11591.1| unnamed protein product [Tetraodon nigroviridis]
Length = 374
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 6 TTVKRKSSNVAKQ-TGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
+TV+ + NVA Q T S + + N+P E+EEL +A+G ++ L + +G +G
Sbjct: 134 STVRGRLINVALQPTDSLLCLTNLPHTFTAQELEELVRAYGNIERSFLVYSEL-TGHSKG 192
Query: 65 FGFVEFITKNEAKR 78
+GFVE++ K+ A R
Sbjct: 193 YGFVEYMKKDSASR 206
>gi|348571397|ref|XP_003471482.1| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Cavia
porcellus]
Length = 413
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|130750552|gb|ABO32290.1| TDP43 [Homo sapiens]
Length = 416
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|357144686|ref|XP_003573379.1| PREDICTED: uncharacterized protein LOC100836665 isoform 1
[Brachypodium distachyon]
Length = 606
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 9 KRKSSNVAKQTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
K +SN ++ TGSK L + N+PF A+ +V+E F GE+ VRL G +G+
Sbjct: 328 KTPASNQSQGTGSKTLFMGNLPFSAEFGQVKEFFAEAGEVVDVRL--ATHEDGHPKGYAH 385
Query: 68 VEFITKNEAKR 78
VEF T +AK+
Sbjct: 386 VEFATAEDAKK 396
>gi|281427346|ref|NP_001163962.1| RNA binding motif protein 19 [Xenopus (Silurana) tropicalis]
gi|189442184|gb|AAI67335.1| Unknown (protein for MGC:135501) [Xenopus (Silurana) tropicalis]
Length = 542
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S+++V+N+P K+ ELF AFG L L K G R FGF+ F+++ EAK
Sbjct: 2 SRLIVKNLPNGIKEDRFRELFAAFGTLTDCSL--KYTKDGKFRKFGFIGFVSEEEAK 56
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
++ VRN+P+ + ++E+LF +G + + P + + +GF FV F+ A
Sbjct: 387 RLFVRNLPYTCNEDDLEKLFSKYGPISEIHFPIDSL-TKKPKGFAFVTFLITEHA 440
>gi|117644607|emb|CAL37794.1| hypothetical protein [synthetic construct]
Length = 414
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|108996989|ref|XP_001102660.1| PREDICTED: TAR DNA-binding protein 43 [Macaca mulatta]
Length = 414
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|428181978|gb|EKX50840.1| hypothetical protein GUITHDRAFT_85230, partial [Guillardia theta
CCMP2712]
Length = 243
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
S + Q + V NIP+ A + ++E++F+A G + R K +G +GFGF EF
Sbjct: 2 SGSRGSQASRSVFVGNIPYNATEEQLEDIFRAVGHVVSFRWLVKNSDTGQPKGFGFCEF 60
>gi|357147883|ref|XP_003574528.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Brachypodium distachyon]
Length = 313
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 18 QTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
QT SK+L +RN+P++A + E+ EL K FG R+ M G +R FVEF +N+A
Sbjct: 12 QTPSKVLHLRNMPWEATEEELVELCKPFG-----RVVNTMCNVGANRNQAFVEFADQNQA 66
>gi|218187112|gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group]
Length = 263
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+Q +LVRNIP + ++ F+ FG ++ V LPK SG RGF FVEF+ +A
Sbjct: 33 EQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYY-SGEPRGFAFVEFVDPYDA 91
>gi|62897067|dbj|BAD96474.1| TAR DNA binding protein variant [Homo sapiens]
Length = 414
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 15 VAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
V K GS + V+NI E+ E F FG + +L + G+++GFGFV F +
Sbjct: 290 VLKYKGSNVYVKNIDDDVTDEELRERFSQFGTITSSKLMRD--DKGINKGFGFVCFSNPD 347
Query: 75 EAKRV 79
EAKR
Sbjct: 348 EAKRA 352
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ + V+N+ + + ++E F FG++ + + + +G+ RGFGF+ F ++AKR
Sbjct: 193 TNLYVKNLDPEIGEEHLQEKFSEFGKISSMIISRDE--NGVSRGFGFINFENSDDAKRA 249
>gi|410966016|ref|XP_003989534.1| PREDICTED: TAR DNA-binding protein 43 [Felis catus]
Length = 414
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|423204534|ref|ZP_17191090.1| hypothetical protein HMPREF1168_00725 [Aeromonas veronii AMC34]
gi|404625858|gb|EKB22669.1| hypothetical protein HMPREF1168_00725 [Aeromonas veronii AMC34]
Length = 163
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 8 VKRKSSNVAK----QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
+KR +NVA+ Q + V N+P++A + V ELF G++ VRL K +G R
Sbjct: 55 LKRTPANVAESIANQETCTLYVGNLPYRANEIAVRELFAEQGQVISVRLMKDK-ATGKRR 113
Query: 64 GFGFVEF 70
GFGFVE
Sbjct: 114 GFGFVEM 120
>gi|307106759|gb|EFN55004.1| hypothetical protein CHLNCDRAFT_134820 [Chlorella variabilis]
Length = 1274
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKR 78
+++VRN+PF A ++++ + F G + + LP+ G G RGF FV F K A+R
Sbjct: 278 RLIVRNLPFTASEADLRQAFAPAGFVWELSLPRSASGRG--RGFAFVGFTCKAHAER 332
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELK---FVRLPKKMVGSGLHRGFGFVE 69
++ K + VR I +++E F G +K VR K G HRGFGFV+
Sbjct: 2 ADAKKNDPRTVFVRGIDASVTNEQLQEFFSEVGPVKNAFLVRRGK----DGPHRGFGFVQ 57
Query: 70 FITKNEAKRV 79
F + +A+R
Sbjct: 58 FAVQEDAERA 67
>gi|169610962|ref|XP_001798899.1| hypothetical protein SNOG_08590 [Phaeosphaeria nodorum SN15]
gi|111062638|gb|EAT83758.1| hypothetical protein SNOG_08590 [Phaeosphaeria nodorum SN15]
Length = 742
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 22 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
KI+VRN+P+ K E + + F ++G++ FV LPKK SG RGF FV K A+R
Sbjct: 150 KIIVRNLPWSIKTPEQLGKHFLSYGKVNFVTLPKKP--SGELRGFAFVALRGKKHAERA 206
>gi|336469459|gb|EGO57621.1| hypothetical protein NEUTE1DRAFT_122010 [Neurospora tetrasperma
FGSC 2508]
gi|350290896|gb|EGZ72110.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 771
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
KR + Q +K+++RN+P+ K+ E + ELFK +G+++F LP G GFGF
Sbjct: 144 KRAEAVAEAQKPNKLIIRNLPWSIKKPEQLAELFKPYGKVRFADLPN---DKGKLSGFGF 200
Query: 68 V 68
V
Sbjct: 201 V 201
>gi|6678271|ref|NP_031401.1| TAR DNA-binding protein 43 [Homo sapiens]
gi|114553910|ref|XP_514380.2| PREDICTED: TAR DNA-binding protein 43 isoform 3 [Pan troglodytes]
gi|397503024|ref|XP_003822136.1| PREDICTED: TAR DNA-binding protein 43 [Pan paniscus]
gi|20140568|sp|Q13148.1|TADBP_HUMAN RecName: Full=TAR DNA-binding protein 43; Short=TDP-43
gi|901998|gb|AAA70033.1| TAR DNA-binding protein-43 [Homo sapiens]
gi|4886441|emb|CAB43367.1| hypothetical protein [Homo sapiens]
gi|47939520|gb|AAH71657.1| TARDBP protein [Homo sapiens]
gi|49065494|emb|CAG38565.1| TARDBP [Homo sapiens]
gi|63100767|gb|AAH95435.1| TAR DNA binding protein [Homo sapiens]
gi|119592076|gb|EAW71670.1| TAR DNA binding protein, isoform CRA_b [Homo sapiens]
gi|119592077|gb|EAW71671.1| TAR DNA binding protein, isoform CRA_b [Homo sapiens]
gi|130750566|gb|ABO32291.1| TDP43 splice variant 1 [Homo sapiens]
gi|167774073|gb|ABZ92471.1| TAR DNA binding protein [synthetic construct]
gi|208965598|dbj|BAG72813.1| TAR DNA binding protein [synthetic construct]
gi|410251008|gb|JAA13471.1| TAR DNA binding protein [Pan troglodytes]
gi|410302770|gb|JAA29985.1| TAR DNA binding protein [Pan troglodytes]
gi|410342291|gb|JAA40092.1| TAR DNA binding protein [Pan troglodytes]
gi|410342293|gb|JAA40093.1| TAR DNA binding protein [Pan troglodytes]
Length = 414
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|85109471|ref|XP_962933.1| hypothetical protein NCU06217 [Neurospora crassa OR74A]
gi|28924577|gb|EAA33697.1| hypothetical protein NCU06217 [Neurospora crassa OR74A]
Length = 772
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
KR + Q +K+++RN+P+ K+ E + ELFK +G+++F LP G GFGF
Sbjct: 144 KRAEAVAEAQKPNKLIIRNLPWSIKKPEQLAELFKPYGKVRFADLPN---DKGKLSGFGF 200
Query: 68 V 68
V
Sbjct: 201 V 201
>gi|383158051|gb|AFG61373.1| Pinus taeda anonymous locus 2_5255_01 genomic sequence
gi|383158053|gb|AFG61374.1| Pinus taeda anonymous locus 2_5255_01 genomic sequence
Length = 96
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 11 KSSNVAKQTG-SKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGF 67
SSN+ ++ + + V N+ ++++++ELFK FG + +V + ++ +G+ RGFGF
Sbjct: 4 DSSNMRRRNDENSVRVTNLSEDTREADLQELFKPFGHITRVYVAVDQR---TGMSRGFGF 60
Query: 68 VEFITKNEAKRV 79
+ F + +A+R
Sbjct: 61 INFANREDAQRA 72
>gi|355763816|gb|EHH62216.1| hypothetical protein EGM_20453 [Macaca fascicularis]
Length = 414
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|332250292|ref|XP_003274288.1| PREDICTED: TAR DNA-binding protein 43 [Nomascus leucogenys]
gi|402852911|ref|XP_003891150.1| PREDICTED: TAR DNA-binding protein 43 [Papio anubis]
gi|380783713|gb|AFE63732.1| TAR DNA-binding protein 43 [Macaca mulatta]
gi|384941330|gb|AFI34270.1| TAR DNA-binding protein 43 [Macaca mulatta]
Length = 414
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|197097374|ref|NP_001127597.1| TAR DNA-binding protein 43 [Pongo abelii]
gi|75070499|sp|Q5R5W2.1|TADBP_PONAB RecName: Full=TAR DNA-binding protein 43; Short=TDP-43
gi|55732302|emb|CAH92854.1| hypothetical protein [Pongo abelii]
Length = 414
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
S + + N+ F + +V F GE+ VRLPK SG +GFG+VEF + A+
Sbjct: 312 STLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKD-PDSGRPKGFGYVEFAAQESAQ 367
>gi|440300922|gb|ELP93369.1| 29 kDa ribonucleoprotein, putative [Entamoeba invadens IP1]
Length = 248
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+K+ V N+ F+ + ++ F++FG++K RL M+ G +GFGFVE+ T+ +AK+
Sbjct: 2 TKLYVGNLSFKTTEEAMKTHFESFGKVKECRL---MIYRGYSKGFGFVEYETEEDAKKA 57
>gi|189065487|dbj|BAG35326.1| unnamed protein product [Homo sapiens]
Length = 414
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|357017461|gb|AET50759.1| hypothetical protein [Eimeria tenella]
Length = 196
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+LVRN+ +Q V F G +K V LP S + RGFGFVEF + +A+R
Sbjct: 12 LLVRNLSYQTSPEAVRSAFAVHGSVKDVYLPLDYH-SRMPRGFGFVEFWHREDAERA 67
>gi|367026828|ref|XP_003662698.1| hypothetical protein MYCTH_2303648 [Myceliophthora thermophila ATCC
42464]
gi|347009967|gb|AEO57453.1| hypothetical protein MYCTH_2303648 [Myceliophthora thermophila ATCC
42464]
Length = 802
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 22 KILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
K+++RN+P+ K+ E + +LF++FG++KFV LP G GFGFV + A+R
Sbjct: 153 KLIIRNLPWSIKKPEQLAKLFQSFGKVKFVDLPN---DKGKLAGFGFVTLRGRKNAERA 208
>gi|224094314|ref|XP_002310138.1| predicted protein [Populus trichocarpa]
gi|222853041|gb|EEE90588.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
++ G KI V +P +A ++ + F FG + V +PK +G HRGFGFV F
Sbjct: 218 SRGMGKKIFVGRLPQEASAEDLRQYFGRFGHILDVYVPKDPKRTG-HRGFGFVTFAEDGV 276
Query: 76 AKRV 79
A RV
Sbjct: 277 ADRV 280
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
K++V IP++ + E FG L+ + K+ SG RGFG+V F++ +AK V
Sbjct: 4 KLVVLGIPWEIDTEGLREYMTKFGGLEDCIVMKER-SSGRSRGFGYVTFVSAEDAKAV 60
>gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indica Group]
Length = 289
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R +Q +LVRNIP + ++ F+ FG ++ V LPK +G RGF FV
Sbjct: 49 RRGYGGRKEQGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYY-TGEPRGFAFV 107
Query: 69 EFITKNEA 76
EF+ +A
Sbjct: 108 EFVDPYDA 115
>gi|194699092|gb|ACF83630.1| unknown [Zea mays]
gi|448878224|gb|AGE46075.1| arginine/serine-rich splicing factor SCL30 transcript I [Zea
mays]
Length = 258
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K+ +LVRNIP + ++ F+ FG ++ V +PK SG RGF FVEF+ +A
Sbjct: 34 KEGSGSLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYY-SGEPRGFAFVEFVDPYDA 92
>gi|375110310|ref|ZP_09756537.1| hypothetical protein AJE_10114 [Alishewanella jeotgali KCTC 22429]
gi|374569613|gb|EHR40769.1| hypothetical protein AJE_10114 [Alishewanella jeotgali KCTC 22429]
Length = 167
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 11 KSSNVAKQTG-----SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGF 65
+SNVA T + + V N+P++A + V+ LF +G + VRL K +G RGF
Sbjct: 65 DNSNVAADTSFEGETTTLYVGNLPYRANEETVKALFAKYGTVANVRLMKDR-QTGRRRGF 123
Query: 66 GFVEFITKNEAKRV 79
GFVE + K +
Sbjct: 124 GFVEVAAADANKMI 137
>gi|307152307|ref|YP_003887691.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306982535|gb|ADN14416.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 116
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
I V N+P+Q Q +++E+F +G +K V+LP SG RGF FV+ + E
Sbjct: 3 IYVGNLPYQVTQDDIKEVFGEYGTVKQVKLPIDRE-SGRVRGFAFVDLDSDAE 54
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
S + V N+ F A + ++ E+F +G +K VR+P SG +GFG+VEF AK+
Sbjct: 409 SVLFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRE-SGRPKGFGYVEFEDVESAKKA 466
>gi|405960659|gb|EKC26560.1| hypothetical protein CGI_10004059 [Crassostrea gigas]
Length = 219
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ V N+P+ + ++EE F+ G +K VR+PK+ G+G +GF +VEF
Sbjct: 115 LFVGNLPYSVTKEQLEEHFRKTGGVKAVRIPKEK-GTGKSKGFAYVEF 161
>gi|226499886|ref|NP_001151590.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
gi|195647980|gb|ACG43458.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
Length = 462
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
++ G KI V +P +A ++ F FG + +PK SG HRGFGFV F +
Sbjct: 324 SQAVGKKIFVGRLPQEANTDDLRHYFGRFGRIVDAYIPKDPKRSG-HRGFGFVTFADEGV 382
Query: 76 AKRV 79
A+RV
Sbjct: 383 AERV 386
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T K + + + ++I V IP +S F+AFGE+ + +PK+ GS HRG G
Sbjct: 180 TPKEEMKSQGTKKATRIFVARIPQSVDESMFRRHFEAFGEILDLYMPKEH-GSKGHRGIG 238
Query: 67 FVEF 70
F+ F
Sbjct: 239 FITF 242
>gi|448878226|gb|AGE46076.1| arginine/serine-rich splicing factor SCL30 transcript II [Zea
mays]
Length = 259
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K+ +LVRNIP + ++ F+ FG ++ V +PK SG RGF FVEF+ +A
Sbjct: 34 KEGSGSLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYY-SGEPRGFAFVEFVDPYDA 92
>gi|448517396|ref|XP_003867785.1| Nop4 nucleolar protein [Candida orthopsilosis Co 90-125]
gi|380352124|emb|CCG22348.1| Nop4 nucleolar protein [Candida orthopsilosis]
Length = 752
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+K SN +Q I VRNIP+ A + ++E F+ FG +K+ LP +GL +G FV
Sbjct: 321 KKKSN--RQEAYSIFVRNIPYDADEESLKEHFEVFGPVKYA-LPVVDKETGLSKGSAFVA 377
Query: 70 F 70
F
Sbjct: 378 F 378
>gi|427791903|gb|JAA61403.1| Putative rna-binding protein sart3 rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 598
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+K+ V+ IPF + E+EELF +GELK VRL +G +G +VE+ + A
Sbjct: 523 NKLFVKGIPFSVTEKELEELFGKYGELKGVRLVTYR--NGHSKGIAYVEYANETSA 576
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
+ + N+ + ++S++EE FK GE++ +RL + G +GFG++ F
Sbjct: 436 VFLSNLAYDVEESQIEEAFKEVGEIEELRLVRDY--KGRSKGFGYLVF 481
>gi|354556704|ref|ZP_08975994.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|353551316|gb|EHC20722.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 94
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
I V N+ ++ Q ++EE+F +G +K V++P +G RGFGFVE T+ E
Sbjct: 3 IYVGNLSYEVTQVDLEEVFGEYGTVKRVQIPSDRE-TGKSRGFGFVEMGTETE 54
>gi|328766440|gb|EGF76494.1| hypothetical protein BATDEDRAFT_21058 [Batrachochytrium
dendrobatidis JAM81]
Length = 551
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
AT + A+++ KI V IP +V+EL K FGELK L + +GL +G
Sbjct: 326 ATQPSIAPATSAQESLDKIFVGAIPTYLSDDQVQELLKTFGELKTFSLIRDSA-TGLSKG 384
Query: 65 FGFVEFI 71
F F E++
Sbjct: 385 FAFCEYV 391
>gi|297834768|ref|XP_002885266.1| hypothetical protein ARALYDRAFT_479366 [Arabidopsis lyrata subsp.
lyrata]
gi|297331106|gb|EFH61525.1| hypothetical protein ARALYDRAFT_479366 [Arabidopsis lyrata subsp.
lyrata]
Length = 564
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 11 KSSNVAKQTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
K+ Q GSK L N+ FQ K+S++E FK GE+ VR G +G+G VE
Sbjct: 302 KTPTTETQGGSKTLFAGNLSFQIKRSDIENFFKEAGEVVDVRF--SSYDDGTFKGYGHVE 359
Query: 70 FITKNEAKRV 79
F + EA++
Sbjct: 360 FASPEEAQKA 369
>gi|301107420|ref|XP_002902792.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097910|gb|EEY55962.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1005
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 14 NVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
+ Q + +RN+ FQ + + E F+AFG +++ R+ + GSGL +G GFV F +
Sbjct: 519 DTEAQRDRTLFIRNLSFQTSEDGLREFFQAFGAVEYARVVYEK-GSGLSKGVGFVRFKSA 577
Query: 74 NEAKRV 79
+ A V
Sbjct: 578 DVAAEV 583
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 18/69 (26%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFG---ELKFVRLP--------KKMVGS-------GL 61
G +++VRN+ FQ +++E+LF+ G E++ VR+P ++ G G
Sbjct: 348 GLRLIVRNLAFQTTDTDLEKLFEVHGPLFEVRVVRMPVEEDTKESEEADGETNAEPVLGR 407
Query: 62 HRGFGFVEF 70
RGFGFV++
Sbjct: 408 SRGFGFVQY 416
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPK---KMVGSGLHRGFGFVEFITKNEA 76
+ + VRN+PF Q E+E +F G ++ + + K K L RGF FV+F +++A
Sbjct: 2 ASVFVRNLPFGVTQEELEHVFSEIGPVRKIDVIKDKGKRKSEMLTRGFAFVKFAVESDA 60
>gi|119592079|gb|EAW71673.1| TAR DNA binding protein, isoform CRA_d [Homo sapiens]
Length = 298
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + +++E F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQV-KKDLKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|115445337|ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor [Oryza sativa]
gi|113535979|dbj|BAF08362.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|215704460|dbj|BAG93894.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R +Q +LVRNIP + ++ F+ FG ++ V LPK +G RGF FV
Sbjct: 25 RRGYGGRKEQGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYY-TGEPRGFAFV 83
Query: 69 EFITKNEA 76
EF+ +A
Sbjct: 84 EFVDPYDA 91
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 3 SEATTVKRKSSNVAKQTGS----KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG 58
+E R + A Q+ ++ V NI F +++++ +F+ FGEL+F +L K+
Sbjct: 313 AEKNRQARTTEGTATQSNGVPFHRLYVGNIHFSITEADLKNVFEPFGELEFAQLQKEE-- 370
Query: 59 SGLHRGFGFVEFITKNEAK 77
+G +G+GFV+FI +AK
Sbjct: 371 NGRSKGYGFVQFIDPAQAK 389
>gi|297798166|ref|XP_002866967.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312803|gb|EFH43226.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 380
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
G+KI V +P +A ++ E F FG ++ +PK SG HRGFGFV F
Sbjct: 240 GNKIFVGRLPQEASVDDLREYFGRFGRIQDAYIPKDPKRSG-HRGFGFVTF 289
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 4 EATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
+ T K + AK+ ++I V IP +S+ F+ +GE+ + +PK S HR
Sbjct: 75 KVATPKEEMRQPAKKV-TRIFVARIPSSVSESDFRSHFERYGEITDLYMPKDH-NSKQHR 132
Query: 64 GFGFVEFITKNEAK 77
G GF+ F + + +
Sbjct: 133 GIGFITFSSADSVE 146
>gi|356496896|ref|XP_003517301.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 362
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
+++T KI V +P +A ++ + F FG + V +P+ +G HRGFGFV F
Sbjct: 224 SRRTSKKIFVGRLPPEATSDDLRQYFGRFGRILDVYVPRDPKRTG-HRGFGFVTFAEDGV 282
Query: 76 AKRV 79
A RV
Sbjct: 283 ADRV 286
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
++I V IP ++ F+ +GE+ + +PK GS +HRG GF+ F + + + +
Sbjct: 92 TRIFVARIPQSVTEATFRSHFEKYGEITDLYMPKDQ-GSKMHRGIGFITFASADSVENL 149
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
K++V IP+ + E FGEL+ + K+ +G RGFG+V F + ++AK V
Sbjct: 5 KLVVLGIPWDIDTEGLREYMSKFGELEDCIVMKER-STGRSRGFGYVTFASVDDAKEV 61
>gi|258405873|ref|YP_003198615.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM
5692]
gi|257798100|gb|ACV69037.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM
5692]
Length = 87
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
I V N+PF + + EV +LF +GE++ V+L +G RGFGFVE
Sbjct: 4 IYVGNLPFSSTEDEVRDLFAQYGEVQSVKLISDR-DTGRPRGFGFVEM 50
>gi|224084344|ref|XP_002307266.1| predicted protein [Populus trichocarpa]
gi|222856715|gb|EEE94262.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNE 75
++ G KI V +P +A ++ + F FG + V +PK +G HRGFGFV F
Sbjct: 218 SRGMGKKIFVGRLPQEASTEDLRQYFGRFGHIIDVYVPKDPKRTG-HRGFGFVTFAEDGV 276
Query: 76 AKRV 79
A RV
Sbjct: 277 ADRV 280
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
K+++ IP++ + + FGEL+ + K+ SG RGFG+V F++ +AK V
Sbjct: 4 KLVILGIPWEIDTEGLRQYMSKFGELEDCIVMKER-SSGRSRGFGYVTFVSAEDAKAV 60
>gi|444376096|ref|ZP_21175345.1| RNA-binding protein [Enterovibrio sp. AK16]
gi|443679867|gb|ELT86518.1| RNA-binding protein [Enterovibrio sp. AK16]
Length = 149
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
T I V N+P++A +++V+ELF GE+ VRL K +G RGFGFV
Sbjct: 62 STSKTIYVGNLPYRANENDVKELFSKHGEVFAVRLMKDKR-TGKRRGFGFV 111
>gi|86824038|gb|AAI05528.1| TAR DNA binding protein [Bos taurus]
Length = 298
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + ++++ F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|222622536|gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryza sativa Japonica Group]
Length = 304
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+R +Q +LVRNIP + ++ F+ FG ++ V LPK +G RGF FV
Sbjct: 64 RRGYGGRKEQGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYY-TGEPRGFAFV 122
Query: 69 EFITKNEA 76
EF+ +A
Sbjct: 123 EFVDPYDA 130
>gi|385305287|gb|EIF49275.1| nuclear localization sequence binding protein [Dekkera bruxellensis
AWRI1499]
Length = 358
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
A +K + + + V N+ F+A +V F++FG ++ +R+P + G+ RG
Sbjct: 199 ANNRAKKYGDTPSEPSDTLFVGNLSFEATMDDVRGAFESFGSIEXIRIPTR-PGTEDPRG 257
Query: 65 FGFVEFITKNEAK 77
F +V+F + EAK
Sbjct: 258 FAYVQFSSVEEAK 270
>gi|429856401|gb|ELA31310.1| RNA recognition motif containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 836
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Query: 1 MGSEATTVKRKSSNVAKQT--GSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMV 57
+G+ A++ K+K + ++ K+++RN+P+ K SE + LF+A+G +K+ LP+
Sbjct: 207 VGAAASSEKQKRAQALEEARKPPKLIIRNLPWTIKNSEQLSALFRAYGIVKYADLPQ--- 263
Query: 58 GSGLHRGFGFV 68
G +GFGFV
Sbjct: 264 NKGKLKGFGFV 274
>gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
+Q +LVRNIP + ++ F+ FG ++ V LPK +G RGF FV+F+ EA
Sbjct: 113 EQNHGSLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYY-TGEPRGFAFVQFVDPYEA 171
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus
tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus
tauri]
Length = 269
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
G +LVRN+ + A++ +V + F +G + V +PK +G RG FV++ T++EA
Sbjct: 43 GVSVLVRNLSWDAREDDVRDRFAGYGNILDVYMPKDR-ETGRPRGLAFVKYATQSEA 98
>gi|296086175|emb|CBI31616.3| unnamed protein product [Vitis vinifera]
Length = 193
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGFVEFITKNEAKR 78
+ + V N+ ++ ++ ELF+ FG + +V + +K +G+ RGFGFV F+ K +A+R
Sbjct: 112 NSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAIDQK---TGMSRGFGFVNFVNKEDAER 168
Query: 79 V 79
Sbjct: 169 A 169
>gi|156086728|ref|XP_001610772.1| Ser/Arg-rich splicing factor [Babesia bovis T2Bo]
gi|154798025|gb|EDO07204.1| Ser/Arg-rich splicing factor, putative [Babesia bovis]
Length = 188
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 1 MGSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
MGS +R +S +LVRN+ ++ ++ F FGE++ V LP +
Sbjct: 1 MGSRERHDRRHAS---------LLVRNLKYETSPDQLRAAFSRFGEIRDVYLPLDYY-TR 50
Query: 61 LHRGFGFVEFITKNEAK 77
RGFGFVEF + ++A
Sbjct: 51 KPRGFGFVEFFSHSDAD 67
>gi|116180414|ref|XP_001220056.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
gi|88185132|gb|EAQ92600.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
Length = 475
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 10 RKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVE 69
+K +V + V N+PF A +S V F +++ +R+P SG +GF +V
Sbjct: 315 KKHGDVISPPSDTLFVGNLPFSADESSVSNYFNEVAQVQSLRIPTDQE-SGRPKGFAYVT 373
Query: 70 FITKNEAKRV 79
F + ++AK+V
Sbjct: 374 FSSIDDAKKV 383
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ + NI F A +S + E F +G + VRLP SG +GFG+V+F + +EA+
Sbjct: 337 LFIGNIAFSADESMISETFAEYGSILGVRLPTDPE-SGRPKGFGYVQFSSIDEAR 390
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
E V K + V G + + N+ + + + F+ FGEL VR+ SG
Sbjct: 213 DEEEVVAPKKTRVEPTEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDR-DSGRS 271
Query: 63 RGFGFVEFITKNEA 76
+GFG+VEF +A
Sbjct: 272 KGFGYVEFTNAEDA 285
>gi|302755192|ref|XP_002961020.1| hypothetical protein SELMODRAFT_164019 [Selaginella moellendorffii]
gi|302767142|ref|XP_002966991.1| hypothetical protein SELMODRAFT_144531 [Selaginella moellendorffii]
gi|300164982|gb|EFJ31590.1| hypothetical protein SELMODRAFT_144531 [Selaginella moellendorffii]
gi|300171959|gb|EFJ38559.1| hypothetical protein SELMODRAFT_164019 [Selaginella moellendorffii]
Length = 395
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
SS+ + G KI V +P A ++ F FG L V +PK HRGFGFV F
Sbjct: 242 SSSQNRGIGKKIFVGRLPLDATAEDLRRYFGNFGRLLDVYVPKDAKKLS-HRGFGFVTFA 300
Query: 72 TKNEAKRV 79
++ A RV
Sbjct: 301 DESVADRV 308
>gi|348688506|gb|EGZ28320.1| hypothetical protein PHYSODRAFT_309221 [Phytophthora sojae]
Length = 694
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S+ V+ G KI + +P+ + +V+EL +AFG L+ L K++ S L +G+GF E++
Sbjct: 463 STTVSDGPG-KIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKEL-SSNLSKGYGFCEYM 520
Query: 72 TKN 74
N
Sbjct: 521 DIN 523
>gi|390359786|ref|XP_003729564.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like
[Strongylocentrotus purpuratus]
Length = 220
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 7 TVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFG 66
T K K + +KI V N+P + +E+LF+ FG++ V L K SG RGFG
Sbjct: 2 THPSKMPAAVKDSPNKIFVSNLPKTWDEGRMEKLFETFGKISQVNLMKNKE-SGDSRGFG 60
Query: 67 FVEFITKNEA 76
F+ F T +A
Sbjct: 61 FITFDTAEDA 70
>gi|148671006|gb|EDL02953.1| RIKEN cDNA 1810035L17, isoform CRA_b [Mus musculus]
Length = 99
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 13 SNVAKQTGSKI-LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S + TG I VR IP+ A SE+ E F FG ++ +P +G HRG G+V+F
Sbjct: 10 SALRSSTGRPIAFVRKIPWTAAASELREHFAQFGHVRRCTVPFDK-ETGFHRGMGWVQFS 68
Query: 72 TKNE 75
++ E
Sbjct: 69 SQEE 72
>gi|13397921|emb|CAC34586.1| hypothetical protein [Mus musculus]
Length = 100
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 3 SEATTVKRKSSNVAKQTGSKI-LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S+ + + S + TG I VR IP+ A SE+ E F FG ++ +P +G
Sbjct: 1 SDGSPAIKGLSALRSSTGRPIAFVRKIPWTAAASELREHFAQFGHVRRCTVPFDK-ETGF 59
Query: 62 HRGFGFVEFITKNE 75
HRG G+V+F ++ E
Sbjct: 60 HRGMGWVQFSSQEE 73
>gi|352096734|ref|ZP_08957490.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
gi|351675956|gb|EHA59114.1| RNP-1 like RNA-binding protein [Synechococcus sp. WH 8016]
Length = 176
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
I V N+PF+A+Q ++ ELF +GE+ LP + +G RGF FVE
Sbjct: 3 IFVGNLPFRAEQEDIIELFSTYGEVTNCALPLERD-TGRKRGFAFVEM 49
>gi|226492712|ref|NP_001150206.1| LOC100283836 [Zea mays]
gi|195637558|gb|ACG38247.1| SR repressor protein [Zea mays]
Length = 258
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K+ +LVRNIP + ++ F+ FG ++ V +PK SG RGF FVEF+ +A
Sbjct: 34 KEGSGSLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYY-SGEPRGFAFVEFVDPYDA 92
>gi|113955034|ref|YP_729253.1| RNA recognition motif-containing protein [Synechococcus sp.
CC9311]
gi|113882385|gb|ABI47343.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. CC9311]
Length = 181
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
I V N+PF+A+Q ++ ELF +GE+ LP + +G RGF FVE
Sbjct: 3 IFVGNLPFRAEQEDIIELFSTYGEVTNCALPLERD-TGRKRGFAFVEM 49
>gi|10334491|emb|CAC10207.1| putative splicing factor [Cicer arietinum]
Length = 392
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
K+ V N+ F ++ + E+F+ FG+++ V+LP M +G +GFGFV+F AK
Sbjct: 129 KLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDM-ETGHCKGFGFVQFAHLEHAK 183
>gi|378464494|gb|AFC01196.1| eukaryotic translation initiation factor, partial [Ammopiptanthus
mongolicus]
Length = 147
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 14/75 (18%)
Query: 16 AKQTGSK---------ILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRG 64
A++TGS + V N+ ++ ++ +LF+ FG + +V + +K +G+ RG
Sbjct: 52 AERTGSDMRRRNDENSVRVTNLSEDTREPDLHDLFRPFGAVSRVYVAIDQK---TGISRG 108
Query: 65 FGFVEFITKNEAKRV 79
FGFV F+ K++A+R
Sbjct: 109 FGFVNFVNKDDAQRA 123
>gi|389603137|ref|XP_001568596.2| putative polyadenylate-binding protein 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505742|emb|CAM43715.2| putative polyadenylate-binding protein 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 554
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
G+ + VRN + +++ ELFK +G++K R+ M SG RGFGFV F +EA
Sbjct: 306 GNNLYVRNFDPEFTGADLLELFKEYGDVKSCRV--MMSESGASRGFGFVSFSNADEA 360
>gi|403224014|dbj|BAM42144.1| Ser/Arg-rich splicing factor [Theileria orientalis strain
Shintoku]
Length = 267
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 KQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
K +G LVRN+ F V E F+ FG+++ V LP + RGFGFVE+ K++A
Sbjct: 3 KSSGHSTLVRNLRFSTTPQVVREAFERFGKIRDVYLPLDF-NTKRPRGFGFVEYYEKSDA 61
>gi|262172914|ref|ZP_06040592.1| RNA-binding protein [Vibrio mimicus MB-451]
gi|261893990|gb|EEY39976.1| RNA-binding protein [Vibrio mimicus MB-451]
Length = 151
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
A T + V N+P++A +S V+ELF GE+ VRL K +G RGFGFV
Sbjct: 58 ASSTTKTLYVGNLPYKANESHVKELFAEHGEVFAVRLMKDK-RTGKRRGFGFV 109
>gi|295665859|ref|XP_002793480.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226277774|gb|EEH33340.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 691
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
Query: 22 KILVRNIPFQ-AKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
K+++RN+P+ A+ ++E LF++FG++K +PKK H GFGFV
Sbjct: 159 KLIIRNLPWSIAEPEQLEALFRSFGKVKHAVIPKK---GNKHSGFGFV 203
>gi|37522099|ref|NP_925476.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35213098|dbj|BAC90471.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 123
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+ V N+PF + ++ E F +G +K V++P +G RGF FVE + EAK
Sbjct: 3 VFVGNLPFSVTEQDITEAFSEYGTVKSVKIPTDR-ETGRPRGFAFVEMADEEEAK 56
>gi|361126769|gb|EHK98755.1| putative Nuclear localization sequence-binding protein [Glarea
lozoyensis 74030]
Length = 525
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 11 KSSNVAKQTGSK-------ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHR 63
++ N AKQ G + V N+ F+ Q V E F G + VRLP M SG +
Sbjct: 354 RADNRAKQFGDSQNPPSDTLFVGNLSFEVDQDAVGEAFGEHGTVVNVRLPTDM-DSGNPK 412
Query: 64 GFGFVEFITKNEAK 77
GFG+V F + +EAK
Sbjct: 413 GFGYVTFESIDEAK 426
>gi|195476890|ref|XP_002100023.1| GE16818 [Drosophila yakuba]
gi|194187547|gb|EDX01131.1| GE16818 [Drosophila yakuba]
Length = 903
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
GS+A T + +KI VRN+ + E+ ELF FG +K VRL K+ +
Sbjct: 711 GSDAETRESNFKYSPNMEINKIFVRNLHPACSKEELHELFSPFGSIKDVRLVHKL--NKQ 768
Query: 62 HRGFGFVEFITKNEAKR 78
+G +VEF EA+R
Sbjct: 769 FKGIAYVEFEKPGEAQR 785
>gi|218194012|gb|EEC76439.1| hypothetical protein OsI_14130 [Oryza sativa Indica Group]
Length = 878
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGFVEFITKNE 75
+ S + V N+P+ K +++E +F G ++ F+ PK GS RGFGFV+F T +
Sbjct: 24 HSPSTVFVSNLPYTFKSADLEAVFSEVGPVRRCFMVAPK---GSETSRGFGFVQFATVQD 80
Query: 76 AKR 78
A+R
Sbjct: 81 AER 83
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
+++VRN+PF+ E+ ++F G + V +P+K +G +GF FV F K +A+
Sbjct: 221 RVIVRNLPFKITVKEIMDMFSLAGFVWDVSIPQKS-DNGTSKGFAFVSFTRKQDAE 275
>gi|297793657|ref|XP_002864713.1| nuclear transport factor 2 family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310548|gb|EFH40972.1| nuclear transport factor 2 family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 12 SSNV-AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG--FGFV 68
SS+V + G I VRN+PF + +++EE+FK FG +K + V S +G FGFV
Sbjct: 282 SSHVDVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGI---QVRSNKQQGFCFGFV 338
Query: 69 EFIT 72
EF T
Sbjct: 339 EFET 342
>gi|322695076|gb|EFY86891.1| cutinase negative acting protein [Metarhizium acridum CQMa 102]
Length = 516
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ + N+PF Q V + F E+ VRLP SG +GFG+V F + +AK V
Sbjct: 374 LFIGNLPFDTDQETVRQFFAEVAEVASVRLPTD-PDSGNLKGFGYVTFTSVEDAKNV 429
>gi|164448723|ref|NP_001039950.2| TAR DNA-binding protein 43 [Bos taurus]
gi|296479176|tpg|DAA21291.1| TPA: TAR DNA binding protein [Bos taurus]
gi|440901447|gb|ELR52388.1| TAR DNA-binding protein 43 [Bos grunniens mutus]
Length = 414
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 2 GSEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGL 61
S A VKR A Q S ++V +P++ + ++++ F FGE+ V++ KK + +G
Sbjct: 90 ASSAVKVKR-----AVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQV-KKDIKTGH 143
Query: 62 HRGFGFVEF 70
+GFGFV F
Sbjct: 144 SKGFGFVRF 152
>gi|339899318|ref|XP_001469326.2| putative polyadenylate-binding protein 1 [Leishmania infantum
JPCM5]
gi|398023903|ref|XP_003865113.1| polyadenylate-binding protein 1, putative [Leishmania donovani]
gi|321398770|emb|CAM72432.2| putative polyadenylate-binding protein 1 [Leishmania infantum
JPCM5]
gi|322503349|emb|CBZ38434.1| polyadenylate-binding protein 1, putative [Leishmania donovani]
Length = 560
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVG-SGL 61
SE R+ + G+ + VRN + +++ ELFK +GE+K R+ MV SG
Sbjct: 289 SERLIALRQKYMQHQSLGNNLYVRNFDPEFTGADLLELFKEYGEVKSCRV---MVSESGA 345
Query: 62 HRGFGFVEFITKNEA 76
RGFGFV F +EA
Sbjct: 346 SRGFGFVSFSNADEA 360
>gi|72679465|gb|AAI00568.1| 1810035L17Rik protein, partial [Mus musculus]
Length = 111
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 13 SNVAKQTGSKI-LVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S + TG I VR IP+ A SE+ E F FG ++ +P +G HRG G+V+F
Sbjct: 9 SALRSSTGRPIAFVRKIPWTAAASELREHFAQFGHVRRCTVPFDK-ETGFHRGMGWVQFS 67
Query: 72 TKNE 75
++ E
Sbjct: 68 SQEE 71
>gi|90414705|ref|ZP_01222676.1| hypothetical RNA-binding protein [Photobacterium profundum 3TCK]
gi|90324247|gb|EAS40822.1| hypothetical RNA-binding protein [Photobacterium profundum 3TCK]
Length = 152
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 16 AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFV 68
+ Q+ I V N+P++A +S+V+ LF GE+ VRL K +G RGFGFV
Sbjct: 60 SSQSSKTIYVGNLPYRANESDVKNLFSEHGEVFAVRLMKDK-RTGKRRGFGFV 111
>gi|452852794|ref|YP_007494478.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
gi|451896448|emb|CCH49327.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
Length = 86
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITK 73
I V NIPF A + +V +LF A G++ V+L +G RGFGFVE +
Sbjct: 4 IYVGNIPFSASEDDVRDLFAAHGDVNSVKLVDDRE-TGRFRGFGFVEMDDR 53
>gi|449669310|ref|XP_004206989.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Hydra
magnipapillata]
Length = 480
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 3 SEATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLH 62
S+AT + S V T +K+ V +P + +V+EL FGEL+ L K +GL
Sbjct: 261 SQATHIPGVVSTVVSDTINKVFVGGLPNYLNEDQVKELLSTFGELRAFNLVKDS-ATGLS 319
Query: 63 RGFGFVEFI 71
+G+ F E++
Sbjct: 320 KGYAFCEYV 328
>gi|170579729|ref|XP_001894958.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158598268|gb|EDP36196.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 408
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ VRN+ F+ + ++++ F+ +GE+++ + KK +GL RG+GF++ T + ++V
Sbjct: 150 LFVRNLSFKTTEEQLKKFFEQYGEVQYAEV-KKDYRTGLPRGYGFIKMKTLEDQEKV 205
>gi|67528248|ref|XP_661934.1| hypothetical protein AN4330.2 [Aspergillus nidulans FGSC A4]
gi|40741301|gb|EAA60491.1| hypothetical protein AN4330.2 [Aspergillus nidulans FGSC A4]
gi|259482863|tpe|CBF77747.1| TPA: ribosome biogenesis (Nop4), putative (AFU_orthologue;
AFUA_4G06250) [Aspergillus nidulans FGSC A4]
Length = 724
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 9 KRKSSNVAKQTGSKILVRNIPFQAKQSE-VEELFKAFGELKFVRLPKKMVGSGLHRGFGF 67
K++ A K++VRN+P+ K E + F++FG++K+V LPKK GS L GFGF
Sbjct: 138 KQREQQKADTQPPKLIVRNLPWSIKTPEDLAAHFRSFGKVKYVTLPKK--GSQLA-GFGF 194
Query: 68 VEFITKNEAKRV 79
V K A++
Sbjct: 195 VVLRGKKNAEKA 206
>gi|30697455|ref|NP_200906.2| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
gi|10177321|dbj|BAB10647.1| unnamed protein product [Arabidopsis thaliana]
gi|17063173|gb|AAL32982.1| AT5g60980/MSL3_100 [Arabidopsis thaliana]
gi|27764908|gb|AAO23575.1| At5g60980/MSL3_100 [Arabidopsis thaliana]
gi|332010024|gb|AED97407.1| nuclear transport factor 2 and RNA recognition motif
domain-containing protein [Arabidopsis thaliana]
Length = 460
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 12 SSNV-AKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG--FGFV 68
SS+V + G I VRN+PF + +++EE+FK FG +K + V S +G FGFV
Sbjct: 283 SSHVDVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGI---QVRSNKQQGFCFGFV 339
Query: 69 EFIT 72
EF T
Sbjct: 340 EFET 343
>gi|67605110|ref|XP_666661.1| cutinase negative acting protein [Cryptosporidium hominis TU502]
gi|54657695|gb|EAL36429.1| cutinase negative acting protein [Cryptosporidium hominis]
Length = 475
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 20 GSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
G ++VRNIPF + ++ F G +K V +P + +G RGF VEF
Sbjct: 355 GPSVIVRNIPFSSDDESIKSFFNGCGVVKRVSIP-RYSDTGKMRGFAMVEF 404
>gi|443686443|gb|ELT89721.1| hypothetical protein CAPTEDRAFT_175992 [Capitella teleta]
Length = 444
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 11 KSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEF 70
K+ V K S ++V +P+++ + +++ F FGEL V++ K+ + +G +GFGFV F
Sbjct: 95 KTKRVEKHKCSDLIVLGLPWKSTEDDLQAYFSQFGELLMVQV-KRDLKTGQSKGFGFVRF 153
>gi|76154831|gb|AAX26240.2| SJCHGC03157 protein [Schistosoma japonicum]
Length = 258
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 13 SNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 72
S V + + KI V +P+ + +V+EL +FG LK L K +GL +G+ F E++
Sbjct: 31 STVVQDSPHKIFVGGLPYYLNEDQVKELLLSFGPLKGFNLVKDG-STGLSKGYAFCEYVD 89
Query: 73 KN 74
N
Sbjct: 90 SN 91
>gi|312077588|ref|XP_003141370.1| RNA recognition domain-containing protein domain-containing protein
[Loa loa]
gi|307763465|gb|EFO22699.1| RNA recognition domain-containing protein domain-containing protein
[Loa loa]
Length = 406
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+ VRN+ F+ + ++++ F+ +GE+++ + KK +GL RG+GF++ T + ++V
Sbjct: 149 LFVRNLSFKTTEEQLKKFFEQYGEVQYAEV-KKDYRTGLPRGYGFIKMKTLEDQEKV 204
>gi|406597827|ref|YP_006748957.1| hypothetical protein MASE_14495 [Alteromonas macleodii ATCC
27126]
gi|406375148|gb|AFS38403.1| hypothetical protein MASE_14495 [Alteromonas macleodii ATCC
27126]
Length = 117
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
ILVRN+P Q +E+LF FG + L +GL +GFGFVE T+ E +
Sbjct: 3 ILVRNLPKTFTQENLEDLFFEFGTIASCDLVMDE-ATGLSKGFGFVEMSTQEETDKA 58
>gi|448878234|gb|AGE46080.1| arginine/serine-rich splicing factor SCL28 transcript III [Zea
mays]
Length = 232
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 21 SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
S +L+RNI A+ ++ F+ FG +K V LP+ L RGFGFV+F +A
Sbjct: 57 SGLLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTREL-RGFGFVKFRYPEDA 111
>gi|380088391|emb|CCC13655.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 606
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFIT 72
++ V NI F + +++ +F+ FGEL+FV+L K +G RG+GFV++ T
Sbjct: 285 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD--DNGRSRGYGFVQYFT 333
>gi|333891647|ref|YP_004465522.1| RNA-binding protein [Alteromonas sp. SN2]
gi|332991665|gb|AEF01720.1| RNA-binding protein [Alteromonas sp. SN2]
Length = 154
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 23 ILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKN 74
+ V N+P++A +S V+E F +F E++ VRL K +G +G+GF+E IT +
Sbjct: 74 LYVGNLPYRANESAVKEYFGSFVEVQSVRLMKDR-KTGKRKGYGFIEVITSD 124
>gi|27545034|gb|AAO18440.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|108711831|gb|ABF99626.1| RNA recognition motif family protein [Oryza sativa Japonica
Group]
Length = 885
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 18 QTGSKILVRNIPFQAKQSEVEELFKAFGELK--FVRLPKKMVGSGLHRGFGFVEFITKNE 75
+ S + V N+P+ K +++E +F G ++ F+ PK GS RGFGFV+F T +
Sbjct: 24 HSPSTVFVSNLPYTFKSADLEAVFSEVGPVRRCFMVAPK---GSETSRGFGFVQFATVKD 80
Query: 76 AKR 78
A+R
Sbjct: 81 AER 83
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAKRV 79
+++VRN+PF+ E+ ++F G + V +P+K +G +GF FV F K +A+ V
Sbjct: 221 RVIVRNLPFKITVKEIMDMFSLAGFVWDVSIPQKS-DNGTSKGFAFVSFTRKQDAENV 277
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 4 EATTVKRKSSNVAKQTG---SKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSG 60
+ T + ++N A+Q ++ V NI F + ++ +F FGEL+FV+L K+ +G
Sbjct: 292 QVRTTENSNANGAQQNSVLFHRLYVGNIHFSITEPDLRTVFGPFGELRFVQLQKE--DNG 349
Query: 61 LHRGFGFVEF 70
RG+GFVE+
Sbjct: 350 RSRGYGFVEY 359
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEAK 77
K+ V N+ F ++ + E+F+ FG+++ V+LP M +G +GFGFV+F AK
Sbjct: 304 KLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDME-TGHCKGFGFVQFAHLEHAK 358
>gi|386816934|ref|ZP_10104152.1| RNP-1 like RNA-binding protein [Thiothrix nivea DSM 5205]
gi|386421510|gb|EIJ35345.1| RNP-1 like RNA-binding protein [Thiothrix nivea DSM 5205]
Length = 127
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 22 KILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
I V N+P++ ++E+ +LF A+GE+ V + K + +G +GFGFV+ EA
Sbjct: 2 NIYVGNLPYKITENELRDLFGAYGEVSSVSMIKDKM-TGQSKGFGFVDMPNAGEA 55
>gi|326494672|dbj|BAJ94455.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528325|dbj|BAJ93344.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 18 QTGSKIL-VRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFITKNEA 76
QT SK+L +RN+P+++ + E+ EL K FG R+ M G +R FVEF +N+A
Sbjct: 12 QTPSKVLHLRNMPWESTEEELVELCKPFG-----RVVNTMCNVGANRNQAFVEFADQNQA 66
>gi|74144335|dbj|BAE36031.1| unnamed protein product [Mus musculus]
Length = 360
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 12 SSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRGFGFVEFI 71
S KQ ++ V NIPF+ + ++ ++F FG++ V + GS +GFGFV F
Sbjct: 90 SDPTEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS---KGFGFVTFE 146
Query: 72 TKNEAKR 78
T ++A R
Sbjct: 147 TSSDADR 153
>gi|409204270|ref|ZP_11232464.1| hypothetical protein PflaJ_23169 [Pseudoalteromonas flavipulchra
JG1]
Length = 155
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 5 ATTVKRKSSNVAKQTGSKILVRNIPFQAKQSEVEELFKAFGELKFVRLPKKMVGSGLHRG 64
+ T + K SN++ T + V N+P++A + V ELF+ G++ VRL K +G RG
Sbjct: 54 SDTQQEKQSNLSTTT---LYVGNLPYRANEHVVRELFEEQGQVFSVRLLKDK-NTGKRRG 109
Query: 65 FGFVEFITKNEAKR 78
FGFVE ++K +A++
Sbjct: 110 FGFVE-MSKQDAEK 122
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,000,092,728
Number of Sequences: 23463169
Number of extensions: 30733546
Number of successful extensions: 114961
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 5152
Number of HSP's that attempted gapping in prelim test: 107488
Number of HSP's gapped (non-prelim): 10118
length of query: 79
length of database: 8,064,228,071
effective HSP length: 50
effective length of query: 29
effective length of database: 6,891,069,621
effective search space: 199841019009
effective search space used: 199841019009
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)