BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3347
(245 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 211 bits (536), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 152/244 (62%), Gaps = 28/244 (11%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++++ T ++FAIKALKK ++ D+VE + EKR+ +A HPFL ++F FQT+
Sbjct: 34 VFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA--WEHPFLTHMFCTFQTK 91
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
++ FVMEY GGDLM HI + F RA FYAA ++LGLQ+LH I+YR
Sbjct: 92 ENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR-------- 143
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ K+++ + D +G++KIADFG+CKE M +T FCGTP+++
Sbjct: 144 -----------DLKLDN------ILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYI 186
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE+L Y +VDWW GVL++EML+G+SPF G DEEE+F SI D YPR+L EA
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEA 246
Query: 240 IAIM 243
++
Sbjct: 247 KDLL 250
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 211 bits (536), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 152/244 (62%), Gaps = 28/244 (11%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++++ T ++FAIKALKK ++ D+VE + EKR+ +A HPFL ++F FQT+
Sbjct: 33 VFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA--WEHPFLTHMFCTFQTK 90
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
++ FVMEY GGDLM HI + F RA FYAA ++LGLQ+LH I+YR
Sbjct: 91 ENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR-------- 142
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ K+++ + D +G++KIADFG+CKE M +T FCGTP+++
Sbjct: 143 -----------DLKLDN------ILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYI 185
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE+L Y +VDWW GVL++EML+G+SPF G DEEE+F SI D YPR+L EA
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEA 245
Query: 240 IAIM 243
++
Sbjct: 246 KDLL 249
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 210 bits (535), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 155/245 (63%), Gaps = 28/245 (11%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ + TG+ +A+K LKK I+ D+VE ++EKRI +A HPFL LF CFQT
Sbjct: 39 VMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN--HPFLTQLFCCFQTP 96
Query: 61 AHVCFVMEYAAGGDLMMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ FVME+ GGDLM HI + F E RA FYAA ++ L +LH+ IIYR
Sbjct: 97 DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYR-------- 148
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ K+++ + D EG+ K+ADFG+CKEG+ G T TFCGTP+++
Sbjct: 149 -----------DLKLDN------VLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYI 191
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE+L E Y AVDWW +GVL++EML G +PF ++E+++F++I+NDEV YP +L +A
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDA 251
Query: 240 IAIMR 244
I++
Sbjct: 252 TGILK 256
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 152/246 (61%), Gaps = 33/246 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG Y+A+K L+K IIA+DEV ++E R+ + NT RHPFL L FQT
Sbjct: 24 VILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NT-RHPFLTALKYAFQTH 80
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+CFVMEYA GG+L H+ + VF+E RA FY A +V L+YLH ++YR
Sbjct: 81 DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR-------- 132
Query: 120 EIKRIEAKVQENYKVNSSQEIKL--TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
+IKL + D +G++KI DFGLCKEG+ G TFCGTPE
Sbjct: 133 -------------------DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 173
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSL 237
+LAPEVL + Y RAVDWWGLGV+++EM+ G PF D E +F+ I+ +E+R+PR LS
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 233
Query: 238 EAIAIM 243
EA +++
Sbjct: 234 EAKSLL 239
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 152/246 (61%), Gaps = 33/246 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG Y+A+K L+K IIA+DEV ++E R+ + NT RHPFL L FQT
Sbjct: 21 VILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NT-RHPFLTALKYAFQTH 77
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+CFVMEYA GG+L H+ + VF+E RA FY A +V L+YLH ++YR
Sbjct: 78 DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR-------- 129
Query: 120 EIKRIEAKVQENYKVNSSQEIKL--TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
+IKL + D +G++KI DFGLCKEG+ G TFCGTPE
Sbjct: 130 -------------------DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSL 237
+LAPEVL + Y RAVDWWGLGV+++EM+ G PF D E +F+ I+ +E+R+PR LS
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 230
Query: 238 EAIAIM 243
EA +++
Sbjct: 231 EAKSLL 236
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 208 bits (529), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 152/246 (61%), Gaps = 33/246 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG Y+A+K L+K IIA+DEV ++E R+ + NT RHPFL L FQT
Sbjct: 21 VILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NT-RHPFLTALKYAFQTH 77
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+CFVMEYA GG+L H+ + VF+E RA FY A +V L+YLH ++YR
Sbjct: 78 DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR-------- 129
Query: 120 EIKRIEAKVQENYKVNSSQEIKL--TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
+IKL + D +G++KI DFGLCKEG+ G TFCGTPE
Sbjct: 130 -------------------DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSL 237
+LAPEVL + Y RAVDWWGLGV+++EM+ G PF D E +F+ I+ +E+R+PR LS
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 230
Query: 238 EAIAIM 243
EA +++
Sbjct: 231 EAKSLL 236
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 206 bits (525), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 111/247 (44%), Positives = 151/247 (61%), Gaps = 34/247 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG Y+A+K LKK I+A+DEV L+E R+ + + RHPFL L FQT
Sbjct: 167 VILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS---RHPFLTALKYSFQTH 223
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLH-ESRIIYRPQSNITK 118
+CFVMEYA GG+L H+ + VFSE RA FY A +V L YLH E ++YR
Sbjct: 224 DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR------- 276
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLT--VNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP 176
++KL + D +G++KI DFGLCKEG+ G TFCGTP
Sbjct: 277 --------------------DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP 316
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
E+LAPEVL + Y RAVDWWGLGV+++EM+ G PF D E++F+ I+ +E+R+PR L
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 376
Query: 237 LEAIAIM 243
EA +++
Sbjct: 377 PEAKSLL 383
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 206 bits (524), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/247 (44%), Positives = 151/247 (61%), Gaps = 34/247 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG Y+A+K LKK I+A+DEV L+E R+ + + RHPFL L FQT
Sbjct: 164 VILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS---RHPFLTALKYSFQTH 220
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLH-ESRIIYRPQSNITK 118
+CFVMEYA GG+L H+ + VFSE RA FY A +V L YLH E ++YR
Sbjct: 221 DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR------- 273
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLT--VNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP 176
++KL + D +G++KI DFGLCKEG+ G TFCGTP
Sbjct: 274 --------------------DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP 313
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
E+LAPEVL + Y RAVDWWGLGV+++EM+ G PF D E++F+ I+ +E+R+PR L
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 373
Query: 237 LEAIAIM 243
EA +++
Sbjct: 374 PEAKSLL 380
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 206 bits (524), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 151/246 (61%), Gaps = 33/246 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG Y+A+K L+K IIA+DEV ++E R+ + NT RHPFL L FQT
Sbjct: 21 VILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NT-RHPFLTALKYAFQTH 77
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+CFVMEYA GG+L H+ + VF+E RA FY A +V L+YLH ++YR
Sbjct: 78 DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR-------- 129
Query: 120 EIKRIEAKVQENYKVNSSQEIKL--TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
+IKL + D +G++KI DFGLCKEG+ G FCGTPE
Sbjct: 130 -------------------DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSL 237
+LAPEVL + Y RAVDWWGLGV+++EM+ G PF D E +F+ I+ +E+R+PR LS
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 230
Query: 238 EAIAIM 243
EA +++
Sbjct: 231 EAKSLL 236
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 206 bits (524), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 151/246 (61%), Gaps = 33/246 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG Y+A+K L+K IIA+DEV ++E R+ + NT RHPFL L FQT
Sbjct: 21 VILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NT-RHPFLTALKYAFQTH 77
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+CFVMEYA GG+L H+ + VF+E RA FY A +V L+YLH ++YR
Sbjct: 78 DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR-------- 129
Query: 120 EIKRIEAKVQENYKVNSSQEIKL--TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
+IKL + D +G++KI DFGLCKEG+ G FCGTPE
Sbjct: 130 -------------------DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSL 237
+LAPEVL + Y RAVDWWGLGV+++EM+ G PF D E +F+ I+ +E+R+PR LS
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 230
Query: 238 EAIAIM 243
EA +++
Sbjct: 231 EAKSLL 236
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 206 bits (523), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 151/246 (61%), Gaps = 33/246 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG Y+A+K L+K IIA+DEV ++E R+ + NT RHPFL L FQT
Sbjct: 26 VILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NT-RHPFLTALKYAFQTH 82
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+CFVMEYA GG+L H+ + VF+E RA FY A +V L+YLH ++YR
Sbjct: 83 DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR-------- 134
Query: 120 EIKRIEAKVQENYKVNSSQEIKL--TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
+IKL + D +G++KI DFGLCKEG+ G FCGTPE
Sbjct: 135 -------------------DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 175
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSL 237
+LAPEVL + Y RAVDWWGLGV+++EM+ G PF D E +F+ I+ +E+R+PR LS
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 235
Query: 238 EAIAIM 243
EA +++
Sbjct: 236 EAKSLL 241
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 206 bits (523), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 151/246 (61%), Gaps = 33/246 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG Y+A+K L+K IIA+DEV ++E R+ + NT RHPFL L FQT
Sbjct: 21 VILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NT-RHPFLTALKYAFQTH 77
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+CFVMEYA GG+L H+ + VF+E RA FY A +V L+YLH ++YR
Sbjct: 78 DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR-------- 129
Query: 120 EIKRIEAKVQENYKVNSSQEIKL--TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
+IKL + D +G++KI DFGLCKEG+ G FCGTPE
Sbjct: 130 -------------------DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSL 237
+LAPEVL + Y RAVDWWGLGV+++EM+ G PF D E +F+ I+ +E+R+PR LS
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 230
Query: 238 EAIAIM 243
EA +++
Sbjct: 231 EAKSLL 236
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 203 bits (517), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 150/247 (60%), Gaps = 34/247 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG Y+A+K LKK I+A+DEV L+E R+ + + RHPFL L FQT
Sbjct: 24 VILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS---RHPFLTALKYSFQTH 80
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLH-ESRIIYRPQSNITK 118
+CFVMEYA GG+L H+ + VFSE RA FY A +V L YLH E ++YR
Sbjct: 81 DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR------- 133
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLT--VNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP 176
++KL + D +G++KI DFGLCKEG+ G FCGTP
Sbjct: 134 --------------------DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP 173
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
E+LAPEVL + Y RAVDWWGLGV+++EM+ G PF D E++F+ I+ +E+R+PR L
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 233
Query: 237 LEAIAIM 243
EA +++
Sbjct: 234 PEAKSLL 240
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 203 bits (517), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 150/247 (60%), Gaps = 34/247 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG Y+A+K LKK I+A+DEV L+E R+ + + RHPFL L FQT
Sbjct: 25 VILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS---RHPFLTALKYSFQTH 81
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLH-ESRIIYRPQSNITK 118
+CFVMEYA GG+L H+ + VFSE RA FY A +V L YLH E ++YR
Sbjct: 82 DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR------- 134
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLT--VNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP 176
++KL + D +G++KI DFGLCKEG+ G FCGTP
Sbjct: 135 --------------------DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP 174
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
E+LAPEVL + Y RAVDWWGLGV+++EM+ G PF D E++F+ I+ +E+R+PR L
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 234
Query: 237 LEAIAIM 243
EA +++
Sbjct: 235 PEAKSLL 241
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 203 bits (517), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 150/247 (60%), Gaps = 34/247 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG Y+A+K LKK I+A+DEV L+E R+ + + RHPFL L FQT
Sbjct: 26 VILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS---RHPFLTALKYSFQTH 82
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLH-ESRIIYRPQSNITK 118
+CFVMEYA GG+L H+ + VFSE RA FY A +V L YLH E ++YR
Sbjct: 83 DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR------- 135
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLT--VNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP 176
++KL + D +G++KI DFGLCKEG+ G FCGTP
Sbjct: 136 --------------------DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP 175
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
E+LAPEVL + Y RAVDWWGLGV+++EM+ G PF D E++F+ I+ +E+R+PR L
Sbjct: 176 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 235
Query: 237 LEAIAIM 243
EA +++
Sbjct: 236 PEAKSLL 242
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 203 bits (516), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 152/245 (62%), Gaps = 28/245 (11%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L+ + T E +AIK LKK +I D+VE + EKR+ + + + PFL L +CFQT
Sbjct: 35 VMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD--KPPFLTQLHSCFQTV 92
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ FVMEY GGDLM HI F EP+AVFYAA + +GL +LH+ IIYR
Sbjct: 93 DRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYR-------- 144
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ K+++ + D+EG++KIADFG+CKE M G T FCGTP+++
Sbjct: 145 -----------DLKLDN------VMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYI 187
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y ++VDWW GVL++EML G+ PF G+DE+E+F SI+ V YP+ LS EA
Sbjct: 188 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEA 247
Query: 240 IAIMR 244
++I +
Sbjct: 248 VSICK 252
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 150/245 (61%), Gaps = 28/245 (11%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+LS+ + T E +A+K LKK +I D+VE + EKR+ + + PFL L +CFQT
Sbjct: 36 VMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG--KPPFLTQLHSCFQTM 93
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ FVMEY GGDLM HI F EP AVFYAA + +GL +L IIYR
Sbjct: 94 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR-------- 145
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ K+++ + D+EG++KIADFG+CKE + G T FCGTP+++
Sbjct: 146 -----------DLKLDN------VMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYI 188
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y ++VDWW GVL++EML G++PF G+DE+E+F SI+ V YP+ +S EA
Sbjct: 189 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEA 248
Query: 240 IAIMR 244
+AI +
Sbjct: 249 VAICK 253
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 150/245 (61%), Gaps = 28/245 (11%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+LS+ + T E +A+K LKK +I D+VE + EKR+ + + PFL L +CFQT
Sbjct: 357 VMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG--KPPFLTQLHSCFQTM 414
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ FVMEY GGDLM HI F EP AVFYAA + +GL +L IIYR
Sbjct: 415 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR-------- 466
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ K+++ + D+EG++KIADFG+CKE + G T FCGTP+++
Sbjct: 467 -----------DLKLDN------VMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYI 509
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y ++VDWW GVL++EML G++PF G+DE+E+F SI+ V YP+ +S EA
Sbjct: 510 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEA 569
Query: 240 IAIMR 244
+AI +
Sbjct: 570 VAICK 574
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 150/254 (59%), Gaps = 37/254 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L + + T +A++ +KK + ++++ + +EK +FE A+ HPFLV L +CFQTE
Sbjct: 68 VLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN--HPFLVGLHSCFQTE 125
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ + FV+EY GGDLM H+ E A FY+A + L L YLHE IIYR
Sbjct: 126 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR-------- 177
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ K+++ + D+EG++K+ D+G+CKEG+ GD T TFCGTP ++
Sbjct: 178 -----------DLKLDN------VLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYI 220
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPF--------PGDDEEE-VFDSIVNDEVR 230
APE+L Y +VDWW LGVL+FEM+ G SPF P + E+ +F I+ ++R
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 280
Query: 231 YPRFLSLEAIAIMR 244
PR LS++A ++++
Sbjct: 281 IPRSLSVKAASVLK 294
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 180 bits (457), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 149/254 (58%), Gaps = 37/254 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L + + T +A+K +KK + ++++ + +EK +FE A+ HPFLV L +CFQTE
Sbjct: 21 VLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN--HPFLVGLHSCFQTE 78
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ + FV+EY GGDLM H+ E A FY+A + L L YLHE IIYR
Sbjct: 79 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR-------- 130
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ K+++ + D+EG++K+ D+G+CKEG+ GD T FCGTP ++
Sbjct: 131 -----------DLKLDN------VLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 173
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPF--------PGDDEEE-VFDSIVNDEVR 230
APE+L Y +VDWW LGVL+FEM+ G SPF P + E+ +F I+ ++R
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 233
Query: 231 YPRFLSLEAIAIMR 244
PR LS++A ++++
Sbjct: 234 IPRSLSVKAASVLK 247
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 180 bits (457), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 149/254 (58%), Gaps = 37/254 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L + + T +A+K +KK + ++++ + +EK +FE A+ HPFLV L +CFQTE
Sbjct: 25 VLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN--HPFLVGLHSCFQTE 82
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ + FV+EY GGDLM H+ E A FY+A + L L YLHE IIYR
Sbjct: 83 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR-------- 134
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ K+++ + D+EG++K+ D+G+CKEG+ GD T FCGTP ++
Sbjct: 135 -----------DLKLDN------VLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 177
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPF--------PGDDEEE-VFDSIVNDEVR 230
APE+L Y +VDWW LGVL+FEM+ G SPF P + E+ +F I+ ++R
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 237
Query: 231 YPRFLSLEAIAIMR 244
PR LS++A ++++
Sbjct: 238 IPRSLSVKAASVLK 251
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 180 bits (456), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 149/254 (58%), Gaps = 37/254 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L + + T +A+K +KK + ++++ + +EK +FE A+ HPFLV L +CFQTE
Sbjct: 36 VLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN--HPFLVGLHSCFQTE 93
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ + FV+EY GGDLM H+ E A FY+A + L L YLHE IIYR
Sbjct: 94 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR-------- 145
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ K+++ + D+EG++K+ D+G+CKEG+ GD T FCGTP ++
Sbjct: 146 -----------DLKLDN------VLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 188
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPF--------PGDDEEE-VFDSIVNDEVR 230
APE+L Y +VDWW LGVL+FEM+ G SPF P + E+ +F I+ ++R
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 248
Query: 231 YPRFLSLEAIAIMR 244
PR +S++A ++++
Sbjct: 249 IPRSMSVKAASVLK 262
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 171 bits (433), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 137/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ E+E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEYA GG++ H+ FSEP A FYAA +VL +YLH +IYR
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K EN + D +GY+K+ DFGL K G RT CGTPE+L
Sbjct: 166 DLK------PENLMI-----------DQQGYIKVTDFGLAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 170 bits (430), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 137/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 58 VMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 114
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEYA GG++ H+ FSEP A FYAA +VL +YLH +IYR
Sbjct: 115 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K EN + D +GY+K+ DFG K G RT CGTPE+L
Sbjct: 167 DLK------PENLMI-----------DQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYL 206
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 240 IAIMR 244
++R
Sbjct: 267 KDLLR 271
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 169 bits (429), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 137/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ E+E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEYA GG++ H+ FSEP A FYAA +VL +YLH +IYR
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K EN + D +GY+++ DFGL K G RT CGTPE+L
Sbjct: 166 DLK------PENLMI-----------DQQGYIQVTDFGLAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 169 bits (429), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GGD+ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+K+ADFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIKVADFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GGD+ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+K+ADFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIKVADFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 137/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 58 VMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN---FPFLVKLEFSFKDN 114
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ V+EYA GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 115 SNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 171
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+K+ADFG K G RT CGTPE+L
Sbjct: 172 NL----------------------LIDQQGYIKVADFGFAKRVKG---RTWXLCGTPEYL 206
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 240 IAIMR 244
++R
Sbjct: 267 KDLLR 271
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 136/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------IIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 136/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEYA GG++ H+ FSEP A FYAA +VL +YLH +IYR
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K EN + D +GY+K+ DFG K G RT CGTPE+L
Sbjct: 166 DLK------PENLMI-----------DQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ TG +FA+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEYSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 168 bits (425), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ TG +FA+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEYSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 168 bits (425), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ TG +FA+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEYSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 168 bits (425), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+K+ADFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIKVADFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 167 bits (424), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 137/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D+ ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 167 bits (424), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 136/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 167 bits (424), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 136/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 167 bits (424), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 58 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 114
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 171
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT T CGTPE+L
Sbjct: 172 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWTLCGTPEYL 206
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 240 IAIMR 244
++R
Sbjct: 267 KDLLR 271
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 167 bits (424), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 136/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 58 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 114
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 115 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 171
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 172 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 206
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 240 IAIMR 244
++R
Sbjct: 267 KDLLR 271
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 167 bits (423), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 136/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 167 bits (423), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 136/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 167 bits (423), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFL L F+
Sbjct: 58 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLTKLEFSFKDN 114
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEYA GG++ H+ FSEP A FYAA +VL +YLH +IYR
Sbjct: 115 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K EN + D +GY+K+ DFG K G RT CGTPE+L
Sbjct: 167 DLK------PENLMI-----------DQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYL 206
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 240 IAIMR 244
++R
Sbjct: 267 KDLLR 271
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFL L F+
Sbjct: 58 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLTKLEFSFKDN 114
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEYA GG++ H+ FSEP A FYAA +VL +YLH +IYR
Sbjct: 115 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K EN + D +GY+K+ DFG K G RT CGTPE+L
Sbjct: 167 DLK------PENLMI-----------DQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYL 206
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 240 IAIMR 244
++R
Sbjct: 267 KDLLR 271
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 43 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 99
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 100 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 156
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT T CGTPE+L
Sbjct: 157 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWTLCGTPEYL 191
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 251
Query: 240 IAIMR 244
++R
Sbjct: 252 KDLLR 256
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 58 VMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 114
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 171
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 172 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 206
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 240 IAIMR 244
++R
Sbjct: 267 KDLLR 271
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 136/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 44 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 100
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 101 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 157
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 158 NL----------------------LIDEQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 192
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 252
Query: 240 IAIMR 244
++R
Sbjct: 253 KDLLR 257
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 50 VMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 106
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 107 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 163
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 164 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 198
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 258
Query: 240 IAIMR 244
++R
Sbjct: 259 KDLLR 263
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 167 bits (422), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 136/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEYA GG++ H+ FSEP A FYAA +VL +YLH +IYR
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K EN + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 166 DLK------PENLMI-----------DQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 167 bits (422), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 78 VMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 134
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 135 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 191
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 192 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 226
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 286
Query: 240 IAIMR 244
++R
Sbjct: 287 KDLLR 291
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 167 bits (422), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 58 VMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 114
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 171
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 172 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 206
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 240 IAIMR 244
++R
Sbjct: 267 KDLLR 271
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 167 bits (422), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 58 VMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 114
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 171
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 172 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 206
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 240 IAIMR 244
++R
Sbjct: 267 KDLLR 271
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 166 bits (421), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 136/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI++M G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 166 bits (421), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 136/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 78 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 134
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 135 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 191
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G T T CGTPE+L
Sbjct: 192 NL----------------------LIDQQGYIQVTDFGFAKRVKG---ATWTLCGTPEYL 226
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 286
Query: 240 IAIMR 244
++R
Sbjct: 287 KDLLR 291
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 166 bits (421), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEYA GG++ H+ F EP A FYAA +VL +YLH +IYR
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K EN + D +GY+K+ DFG K G RT CGTPE+L
Sbjct: 166 DLK------PENLMI-----------DQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 136/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ F+EP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 52 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 108
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ F EP A FYAA +VL +YLH +IYR ++ E
Sbjct: 109 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 165
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 166 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 200
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 201 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 260
Query: 240 IAIMR 244
++R
Sbjct: 261 KDLLR 265
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ F EP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEAL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ F EP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 78 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 134
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ F EP A FYAA +VL +YLH +IYR ++ E
Sbjct: 135 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 191
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 192 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 226
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 286
Query: 240 IAIMR 244
++R
Sbjct: 287 KDLLR 291
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
AP ++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 134/245 (54%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 58 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 114
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 171
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 172 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 206
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 240 IAIMR 244
++R
Sbjct: 267 KDLLR 271
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ F EP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 134/245 (54%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFL L F+
Sbjct: 58 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLTKLEFSFKDN 114
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEYA GG++ H+ F EP A FYAA +VL +YLH +IYR
Sbjct: 115 SNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K EN + D +GY+K+ DFG K G RT CGTPE+L
Sbjct: 167 DLK------PENLMI-----------DQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYL 206
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 240 IAIMR 244
++R
Sbjct: 267 KDLLR 271
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 165 bits (417), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 134/245 (54%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 165 bits (417), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 134/245 (54%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 165 bits (417), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 134/245 (54%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 165 bits (417), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 134/245 (54%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 50 VMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 106
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ F EP A FYAA +VL +YLH +IYR ++ E
Sbjct: 107 SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 163
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 164 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 198
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 258
Query: 240 IAIMR 244
++R
Sbjct: 259 KDLLR 263
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 164 bits (416), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 133/231 (57%), Gaps = 28/231 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++++ ++A+K L+K I+ + E + ++SE+ + + ++HPFLV L FQT
Sbjct: 54 VLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV--LLKNVKHPFLVGLHFSFQTA 111
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ FV++Y GG+L H+ + F EPRA FYAA + L YLH I+YR ++ E
Sbjct: 112 DKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR---DLKPE 168
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
I + D++G++ + DFGLCKE + T TFCGTPE+L
Sbjct: 169 NI----------------------LLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYL 206
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR 230
APEVL + Y R VDWW LG +++EML G PF + E++D+I+N ++
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQ 257
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 164 bits (415), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT GTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLAGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 163 bits (413), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L +++ +G ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY AGG++ H+ FSEP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT GTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLXGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 133/245 (54%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ F EP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 163 bits (412), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 133/245 (54%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 58 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 114
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ F EP A FYAA +VL +YLH +IYR ++ E
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 171
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 172 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 206
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 240 IAIMR 244
++R
Sbjct: 267 KDLLR 271
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 163 bits (412), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 133/245 (54%), Gaps = 32/245 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L ++ TG ++A+K L K ++ ++E L+EKRI + N PFLV L F+
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDN 113
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+++ VMEY GG++ H+ F EP A FYAA +VL +YLH +IYR ++ E
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPE 170
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D +GY+++ DFG K G RT CGTPE+L
Sbjct: 171 NL----------------------LIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYL 205
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APE++ Y +AVDWW LGVLI+EM G PF D ++++ IV+ +VR+P S +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 240 IAIMR 244
++R
Sbjct: 266 KDLLR 270
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 161 bits (407), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 140/241 (58%), Gaps = 32/241 (13%)
Query: 8 NTGEYFAIKALKKGDII--ARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
NTG+ FA+K LKK I+ A+D + +E+ I E ++HPF+V+L FQT +
Sbjct: 43 NTGKIFAMKVLKKAMIVRNAKDTAHTK-AERNILE---EVKHPFIVDLIYAFQTGGKLYL 98
Query: 66 VMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++EY +GG+L M + + +F E A FY A + + L +LH+ IIYR ++K
Sbjct: 99 ILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYR--------DLK-- 148
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL 184
EN +N +G+VK+ DFGLCKE + G T TFCGT E++APE+L
Sbjct: 149 ----PENIMLNH-----------QGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEIL 193
Query: 185 TETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
+ + RAVDWW LG L+++ML G PF G++ ++ D I+ ++ P +L+ EA +++
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLK 253
Query: 245 R 245
+
Sbjct: 254 K 254
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 139/241 (57%), Gaps = 32/241 (13%)
Query: 8 NTGEYFAIKALKKGDII--ARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
NTG+ FA+K LKK I+ A+D + +E+ I E ++HPF+V+L FQT +
Sbjct: 43 NTGKIFAMKVLKKAMIVRNAKDTAHTK-AERNILE---EVKHPFIVDLIYAFQTGGKLYL 98
Query: 66 VMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++EY +GG+L M + + +F E A FY A + + L +LH+ IIYR ++K
Sbjct: 99 ILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYR--------DLK-- 148
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL 184
EN +N +G+VK+ DFGLCKE + G T FCGT E++APE+L
Sbjct: 149 ----PENIMLNH-----------QGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEIL 193
Query: 185 TETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
+ + RAVDWW LG L+++ML G PF G++ ++ D I+ ++ P +L+ EA +++
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLK 253
Query: 245 R 245
+
Sbjct: 254 K 254
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 128/238 (53%), Gaps = 30/238 (12%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
++G +A+K LKK + RD V + + E+ I N HPF+V L FQTE + ++
Sbjct: 54 DSGHLYAMKVLKKATLKVRDRVRTKM-ERDILADVN---HPFVVKLHYAFQTEGKLYLIL 109
Query: 68 EYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
++ GGDL + +V F+E FY A + LGL +LH IIYR ++ E I
Sbjct: 110 DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYR---DLKPENI----- 161
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE 186
+ D EG++K+ DFGL KE + + +FCGT E++APEV+
Sbjct: 162 -----------------LLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
++ + DWW GVL+FEML G PF G D +E I+ ++ P+FLS EA +++R
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLR 262
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 125/235 (53%), Gaps = 30/235 (12%)
Query: 11 EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYA 70
+ +A+K LKK + RD V + + + EV HPF+V L FQTE + ++++
Sbjct: 53 QLYAMKVLKKATLKVRDRVRTKMERDILVEV----NHPFIVKLHYAFQTEGKLYLILDFL 108
Query: 71 AGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQ 129
GGDL + +V F+E FY A + L L +LH IIYR ++ E I
Sbjct: 109 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYR---DLKPENI-------- 157
Query: 130 ENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSY 189
+ D EG++K+ DFGL KE + + +FCGT E++APEV+ +
Sbjct: 158 --------------LLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 190 TRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
T++ DWW GVL+FEML G PF G D +E I+ ++ P+FLS EA +++R
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLR 258
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 150 bits (380), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 125/235 (53%), Gaps = 30/235 (12%)
Query: 11 EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYA 70
+ +A+K LKK + RD V + + + EV HPF+V L FQTE + ++++
Sbjct: 54 QLYAMKVLKKATLKVRDRVRTKMERDILVEV----NHPFIVKLHYAFQTEGKLYLILDFL 109
Query: 71 AGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQ 129
GGDL + +V F+E FY A + L L +LH IIYR ++ E I
Sbjct: 110 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYR---DLKPENI-------- 158
Query: 130 ENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSY 189
+ D EG++K+ DFGL KE + + +FCGT E++APEV+ +
Sbjct: 159 --------------LLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 190 TRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
T++ DWW GVL+FEML G PF G D +E I+ ++ P+FLS EA +++R
Sbjct: 205 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLR 259
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 150 bits (379), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 125/235 (53%), Gaps = 30/235 (12%)
Query: 11 EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYA 70
+ +A+K LKK + RD V + + + EV HPF+V L FQTE + ++++
Sbjct: 53 QLYAMKVLKKATLKVRDRVRTKMERDILVEV----NHPFIVKLHYAFQTEGKLYLILDFL 108
Query: 71 AGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQ 129
GGDL + +V F+E FY A + L L +LH IIYR ++ E I
Sbjct: 109 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYR---DLKPENI-------- 157
Query: 130 ENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSY 189
+ D EG++K+ DFGL KE + + +FCGT E++APEV+ +
Sbjct: 158 --------------LLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 190 TRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
T++ DWW GVL+FEML G PF G D +E I+ ++ P+FLS EA +++R
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLR 258
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 147 bits (370), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 128/246 (52%), Gaps = 32/246 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L + R+ G Y+A+K LKK ++ +VE E+ + + HPF++ ++ FQ
Sbjct: 22 VHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT---HPFIIRMWGTFQDA 78
Query: 61 AHVCFVMEYAAGGDLMMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ +M+Y GG+L + + F P A FYAA V L L+YLH IIYR ++ E
Sbjct: 79 QQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYR---DLKPE 135
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
I + D G++KI DFG K D T CGTP+++
Sbjct: 136 NI----------------------LLDKNGHIKITDFGFAKY---VPDVTYXLCGTPDYI 170
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
APEV++ Y +++DWW G+LI+EML G +PF + + ++ I+N E+R+P F + +
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDV 230
Query: 240 IAIMRR 245
++ R
Sbjct: 231 KDLLSR 236
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 134/247 (54%), Gaps = 36/247 (14%)
Query: 8 NTGEYFAIKALKKGDIIARDEV-ESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+TG+ +A+K LKK I+ + + E +E+++ E + + PFLV L FQTE + +
Sbjct: 80 DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE--HIRQSPFLVTLHYAFQTETKLHLI 137
Query: 67 MEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
++Y GG+L H+ + F+E Y +VL L++LH+ IIYR +I E I
Sbjct: 138 LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYR---DIKLENI---- 190
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGF-GDRTGTFCGTPEFLAPEVL 184
+ D+ G+V + DFGL KE + +R FCGT E++AP+++
Sbjct: 191 ------------------LLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232
Query: 185 T--ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE----EVFDSIVNDEVRYPRFLSLE 238
++ + +AVDWW LGVL++E+L G SPF D E+ E+ I+ E YP+ +S
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSAL 292
Query: 239 AIAIMRR 245
A +++R
Sbjct: 293 AKDLIQR 299
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 117/234 (50%), Gaps = 39/234 (16%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L ++++T + +A+K L K ++I R + E+ I AN+ P++V LF FQ +
Sbjct: 90 VQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFYAFQDD 146
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
++ VMEY GGDL+ + E A FY A VVL L +H I+R ++ +
Sbjct: 147 RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR---DVKPDN 203
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC----KEGMGFGDRTGTFCGTP 176
+ + D G++K+ADFG C KEGM R T GTP
Sbjct: 204 M----------------------LLDKSGHLKLADFGTCMKMNKEGMV---RCDTAVGTP 238
Query: 177 EFLAPEVLTETS----YTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN 226
++++PEVL Y R DWW +GV ++EMLVG++PF D + I+N
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 292
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 117/234 (50%), Gaps = 39/234 (16%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L ++++T + +A+K L K ++I R + E+ I AN+ P++V LF FQ +
Sbjct: 85 VQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFYAFQDD 141
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
++ VMEY GGDL+ + E A FY A VVL L +H I+R ++ +
Sbjct: 142 RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR---DVKPDN 198
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC----KEGMGFGDRTGTFCGTP 176
+ + D G++K+ADFG C KEGM R T GTP
Sbjct: 199 M----------------------LLDKSGHLKLADFGTCMKMNKEGMV---RCDTAVGTP 233
Query: 177 EFLAPEVLTETS----YTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN 226
++++PEVL Y R DWW +GV ++EMLVG++PF D + I+N
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 287
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 117/234 (50%), Gaps = 39/234 (16%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L ++++T + +A+K L K ++I R + E+ I AN+ P++V LF FQ +
Sbjct: 90 VQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFYAFQDD 146
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
++ VMEY GGDL+ + E A FY A VVL L +H I+R ++ +
Sbjct: 147 RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR---DVKPDN 203
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC----KEGMGFGDRTGTFCGTP 176
+ + D G++K+ADFG C KEGM R T GTP
Sbjct: 204 M----------------------LLDKSGHLKLADFGTCMKMNKEGMV---RCDTAVGTP 238
Query: 177 EFLAPEVLTETS----YTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN 226
++++PEVL Y R DWW +GV ++EMLVG++PF D + I+N
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 292
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 112/224 (50%), Gaps = 41/224 (18%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L +++ + + +A+K L K ++I R + E+ I AN+ P++V LF FQ +
Sbjct: 91 VQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFCAFQDD 147
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
++ VMEY GGDL+ + E A FY A VVL L +H +I+R ++ +
Sbjct: 148 KYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHR---DVKPDN 204
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG-----TFCGT 175
+ + D G++K+ADFG C + D TG T GT
Sbjct: 205 M----------------------LLDKHGHLKLADFGTCMK----MDETGMVHCDTAVGT 238
Query: 176 PEFLAPEVLTETS----YTRAVDWWGLGVLIFEMLVGESPFPGD 215
P++++PEVL Y R DWW +GV +FEMLVG++PF D
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 282
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ CFQ +
Sbjct: 53 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFCFQDD 109
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 110 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 161
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 162 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 204
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 259
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 109/218 (50%), Gaps = 38/218 (17%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V Q R TG+ +A K L+K I R L+EK+I E N+ F+V+L ++T+
Sbjct: 200 VCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR---FVVSLAYAYETK 256
Query: 61 AHVCFVMEYAAGGDLMMHIH---ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+C V+ GGDL HI+ F E RAVFYAA + GL+ LH RI+YR ++
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR---DLK 313
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC---KEGMGFGDRTGTFCG 174
E I + D G+++I+D GL EG R GT
Sbjct: 314 PENI----------------------LLDDHGHIRISDLGLAVHVPEGQTIKGRVGTV-- 349
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
++APEV+ YT + DWW LG L++EM+ G+SPF
Sbjct: 350 --GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 109/218 (50%), Gaps = 38/218 (17%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V Q R TG+ +A K L+K I R L+EK+I E N+ F+V+L ++T+
Sbjct: 200 VCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR---FVVSLAYAYETK 256
Query: 61 AHVCFVMEYAAGGDLMMHIH---ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+C V+ GGDL HI+ F E RAVFYAA + GL+ LH RI+YR ++
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR---DLK 313
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC---KEGMGFGDRTGTFCG 174
E I + D G+++I+D GL EG R GT
Sbjct: 314 PENI----------------------LLDDHGHIRISDLGLAVHVPEGQTIKGRVGTV-- 349
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
++APEV+ YT + DWW LG L++EM+ G+SPF
Sbjct: 350 --GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 116/235 (49%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 45 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 101
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 102 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 153
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R +F GT +
Sbjct: 154 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANSFVGTAQ 196
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 251
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 37/241 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V Q + TG+ +A K L K + R + + EK+I ++ F+V+L F+T+
Sbjct: 201 VFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR---FIVSLAYAFETK 257
Query: 61 AHVCFVMEYAAGGDLMMHIHA-----DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSN 115
+C VM GGD+ HI+ F EPRA+FY A +V GL++LH+ IIYR +
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYR---D 314
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGT 175
+ E + + D +G V+I+D GL E +T + GT
Sbjct: 315 LKPENV----------------------LLDDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE----EEVFDSIVNDEVRY 231
P F+APE+L Y +VD++ LGV ++EM+ PF E +E+ ++ V Y
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY 412
Query: 232 P 232
P
Sbjct: 413 P 413
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 37/241 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V Q + TG+ +A K L K + R + + EK+I ++ F+V+L F+T+
Sbjct: 201 VFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR---FIVSLAYAFETK 257
Query: 61 AHVCFVMEYAAGGDLMMHIHA-----DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSN 115
+C VM GGD+ HI+ F EPRA+FY A +V GL++LH+ IIYR +
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYR---D 314
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGT 175
+ E + + D +G V+I+D GL E +T + GT
Sbjct: 315 LKPENV----------------------LLDDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE----EEVFDSIVNDEVRY 231
P F+APE+L Y +VD++ LGV ++EM+ PF E +E+ ++ V Y
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY 412
Query: 232 P 232
P
Sbjct: 413 P 413
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 37/241 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V Q + TG+ +A K L K + R + + EK+I ++ F+V+L F+T+
Sbjct: 201 VFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR---FIVSLAYAFETK 257
Query: 61 AHVCFVMEYAAGGDLMMHIHA-----DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSN 115
+C VM GGD+ HI+ F EPRA+FY A +V GL++LH+ IIYR +
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYR---D 314
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGT 175
+ E + + D +G V+I+D GL E +T + GT
Sbjct: 315 LKPENV----------------------LLDDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE----EEVFDSIVNDEVRY 231
P F+APE+L Y +VD++ LGV ++EM+ PF E +E+ ++ V Y
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY 412
Query: 232 P 232
P
Sbjct: 413 P 413
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 37/241 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V Q + TG+ +A K L K + R + + EK+I ++ F+V+L F+T+
Sbjct: 201 VFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR---FIVSLAYAFETK 257
Query: 61 AHVCFVMEYAAGGDLMMHIHA-----DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSN 115
+C VM GGD+ HI+ F EPRA+FY A +V GL++LH+ IIYR +
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYR---D 314
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGT 175
+ E + + D +G V+I+D GL E +T + GT
Sbjct: 315 LKPENV----------------------LLDDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE----EEVFDSIVNDEVRY 231
P F+APE+L Y +VD++ LGV ++EM+ PF E +E+ ++ V Y
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY 412
Query: 232 P 232
P
Sbjct: 413 P 413
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 116/235 (49%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 49 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 105
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 106 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 157
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R +F GT +
Sbjct: 158 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANSFVGTAQ 200
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 255
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 23 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 79
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 80 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 131
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 132 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 174
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 229
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 24 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 80
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 81 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 132
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 133 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 175
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 46 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 102
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 103 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 154
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 155 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANAFVGTAQ 197
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 25 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 81
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 82 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 133
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 134 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 176
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 231
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 26 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 82
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 83 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 134
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 135 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 177
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 232
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 30 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 86
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 87 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 138
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 139 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 181
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 48 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 104
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 105 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 156
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 157 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 199
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 46 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 102
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 103 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 154
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 155 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 197
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 45 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 101
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 102 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 153
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 154 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 196
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 251
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 46 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 102
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 103 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 154
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 155 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 197
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 48 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 104
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 105 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 156
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 157 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 199
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 36/252 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V + Q +T + +A+K + K + R+EV ++ E +I + + HPFLVNL+ FQ E
Sbjct: 31 VCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ---GLEHPFLVNLWYSFQDE 87
Query: 61 AHVCFVMEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ V++ GGDL H+ +V F E + +V+ L YL RII+R ++ +
Sbjct: 88 EDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHR---DMKPD 144
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
I + D G+V I DF + + + T GT ++
Sbjct: 145 NI----------------------LLDEHGHVHITDFNIAA-MLPRETQITTMAGTKPYM 181
Query: 180 APEVLTE---TSYTRAVDWWGLGVLIFEMLVGESPF---PGDDEEEVFDSIVNDEVRYPR 233
APE+ + Y+ AVDWW LGV +E+L G P+ +E+ + V YP
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPS 241
Query: 234 FLSLEAIAIMRR 245
S E ++++++
Sbjct: 242 AWSQEMVSLLKK 253
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 49 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 105
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 106 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 157
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 158 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 200
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 255
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 48 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 104
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 105 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 156
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 157 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 199
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 127/249 (51%), Gaps = 36/249 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+++ TG+ A+K + K + + ++ L E RI +V N HP +V LF +TE
Sbjct: 23 VKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIMKVLN---HPNIVKLFEVIETE 78
Query: 61 AHVCFVMEYAAGGDLMMHIHADVF---SEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+ VMEYA+GG++ ++ A + E RA F +V +QY H+ I++R ++
Sbjct: 79 KTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ--IVSAVQYCHQKFIVHR---DLK 133
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
E + + D + +KIADFG E FG++ TFCG+P
Sbjct: 134 AENL----------------------LLDADMNIKIADFGFSNE-FTFGNKLDTFCGSPP 170
Query: 178 FLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
+ APE+ Y VD W LGV+++ ++ G PF G + +E+ + ++ + R P ++S
Sbjct: 171 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 230
Query: 237 LEAIAIMRR 245
+ ++++
Sbjct: 231 TDCENLLKK 239
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 48 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 104
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 105 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 156
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 157 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 199
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP 254
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 51 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 107
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 108 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 159
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 160 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 202
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 257
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 116/235 (49%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 48 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 104
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G L+ +I F E FY A +V L+YLH II+R
Sbjct: 105 EKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 156
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R +F GT +
Sbjct: 157 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANSFVGTAQ 199
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S +++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 48 VVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 104
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 105 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 156
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 157 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 199
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP 254
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 118/239 (49%), Gaps = 29/239 (12%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+T E FA K + K ++ + E + +E + ++ +P +V F+ + V V+
Sbjct: 65 DTKEVFAGKVVPKSMLLKPHQKEKMSTE---IAIHKSLDNPHVVGFHGFFEDDDFVYVVL 121
Query: 68 EYAAGGDLM-MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
E L+ +H +EP A ++ + G+QYLH +R+I+R
Sbjct: 122 EICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR--------------- 166
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE 186
+ K+ + L +ND + VKI DFGL + G+R T CGTP ++APEVL +
Sbjct: 167 ----DLKLGN-----LFLND-DMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCK 216
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMRR 245
++ VD W LG +++ +LVG+ PF +E + I +E PR ++ A A++RR
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 126/249 (50%), Gaps = 36/249 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+++ TG+ A+K + K + + ++ L E RI +V N HP +V LF +TE
Sbjct: 30 VKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIMKVLN---HPNIVKLFEVIETE 85
Query: 61 AHVCFVMEYAAGGDLMMHIHADVF---SEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+ VMEYA+GG++ ++ A E RA F +V +QY H+ I++R ++
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ--IVSAVQYCHQKFIVHR---DLK 140
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
E + + D + +KIADFG E FG++ TFCG+P
Sbjct: 141 AENL----------------------LLDADMNIKIADFGFSNE-FTFGNKLDTFCGSPP 177
Query: 178 FLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
+ APE+ Y VD W LGV+++ ++ G PF G + +E+ + ++ + R P ++S
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
Query: 237 LEAIAIMRR 245
+ ++++
Sbjct: 238 TDCENLLKK 246
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 31/235 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
+L++ T +AIK L+K II ++V + E+ +V + + HPF V L+ FQ +
Sbjct: 46 TVLARELATSREYAIKILEKRHIIKENKVPYVTRER---DVMSRLDHPFFVKLYFTFQDD 102
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ F + YA G+L+ +I F E FY A +V L+YLH II+R
Sbjct: 103 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR-------- 154
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPE 177
++K EN +N I++T DFG K R F GT +
Sbjct: 155 DLK------PENILLNEDMHIQIT-----------DFGTAKVLSPESKQARANXFVGTAQ 197
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+++PE+LTE S ++ D W LG +I++++ G PF +E +F I+ E +P
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 126/249 (50%), Gaps = 36/249 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+++ TG+ A+K + K + + ++ L E RI +V N HP +V LF +TE
Sbjct: 30 VKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIMKVLN---HPNIVKLFEVIETE 85
Query: 61 AHVCFVMEYAAGGDLMMHIHAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+ VMEYA+GG++ ++ A E RA F +V +QY H+ I++R ++
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ--IVSAVQYCHQKFIVHR---DLK 140
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
E + + D + +KIADFG E FG++ TFCG+P
Sbjct: 141 AENL----------------------LLDADMNIKIADFGFSNE-FTFGNKLDTFCGSPP 177
Query: 178 FLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
+ APE+ Y VD W LGV+++ ++ G PF G + +E+ + ++ + R P ++S
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
Query: 237 LEAIAIMRR 245
+ ++++
Sbjct: 238 TDCENLLKK 246
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 127/249 (51%), Gaps = 36/249 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+++ TG+ A++ + K + + ++ L E RI +V N HP +V LF +TE
Sbjct: 30 VKLARHILTGKEVAVRIIDKTQLNS-SSLQKLFREVRIMKVLN---HPNIVKLFEVIETE 85
Query: 61 AHVCFVMEYAAGGDLMMHI--HADVF-SEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+ VMEYA+GG++ ++ H + E RA F +V +QY H+ I++R ++
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ--IVSAVQYCHQKFIVHR---DLK 140
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
E + + D + +KIADFG E FG++ TFCG+P
Sbjct: 141 AENL----------------------LLDADMNIKIADFGFSNE-FTFGNKLDTFCGSPP 177
Query: 178 FLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
+ APE+ Y VD W LGV+++ ++ G PF G + +E+ + ++ + R P ++S
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
Query: 237 LEAIAIMRR 245
+ ++++
Sbjct: 238 TDCENLLKK 246
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 32/247 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+++ TG AIK + K + ++ L E RI ++ N HP +V LF +TE
Sbjct: 28 VKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN---HPNIVKLFEVIETE 83
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ +MEYA+GG++ ++ A E A +V +QY H+ RI++R ++ E
Sbjct: 84 KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHR---DLKAE 140
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D + +KIADFG E G + TFCG+P +
Sbjct: 141 NL----------------------LLDADMNIKIADFGFSNE-FTVGGKLDTFCGSPPYA 177
Query: 180 APEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE 238
APE+ Y VD W LGV+++ ++ G PF G + +E+ + ++ + R P ++S +
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 237
Query: 239 AIAIMRR 245
+++R
Sbjct: 238 CENLLKR 244
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 29/239 (12%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+T E FA K + K ++ + E + +E + ++ +P +V F+ + V V+
Sbjct: 65 DTKEVFAGKVVPKSMLLKPHQKEKMSTE---IAIHKSLDNPHVVGFHGFFEDDDFVYVVL 121
Query: 68 EYAAGGDLM-MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
E L+ +H +EP A ++ + G+QYLH +R+I+R
Sbjct: 122 EICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR--------------- 166
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE 186
+ K+ + L +ND + VKI DFGL + G+R CGTP ++APEVL +
Sbjct: 167 ----DLKLGN-----LFLND-DMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCK 216
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMRR 245
++ VD W LG +++ +LVG+ PF +E + I +E PR ++ A A++RR
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 29/239 (12%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+T E FA K + K ++ + E + +E + ++ +P +V F+ + V V+
Sbjct: 65 DTKEVFAGKVVPKSMLLKPHQKEKMSTE---IAIHKSLDNPHVVGFHGFFEDDDFVYVVL 121
Query: 68 EYAAGGDLM-MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
E L+ +H +EP A ++ + G+QYLH +R+I+R
Sbjct: 122 EICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR--------------- 166
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE 186
+ K+ + L +ND + VKI DFGL + G+R CGTP ++APEVL +
Sbjct: 167 ----DLKLGN-----LFLND-DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 216
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMRR 245
++ VD W LG +++ +LVG+ PF +E + I +E PR ++ A A++RR
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 29/239 (12%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+T E FA K + K ++ + E + +E + ++ +P +V F+ + V V+
Sbjct: 49 DTKEVFAGKVVPKSMLLKPHQKEKMSTE---IAIHKSLDNPHVVGFHGFFEDDDFVYVVL 105
Query: 68 EYAAGGDLM-MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
E L+ +H +EP A ++ + G+QYLH +R+I+R
Sbjct: 106 EICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR--------------- 150
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE 186
+ K+ + L +ND + VKI DFGL + G+R CGTP ++APEVL +
Sbjct: 151 ----DLKLGN-----LFLND-DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 200
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMRR 245
++ VD W LG +++ +LVG+ PF +E + I +E PR ++ A A++RR
Sbjct: 201 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 259
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 125/249 (50%), Gaps = 36/249 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+++ TG+ A+K + K + + ++ L E RI +V N HP +V LF +TE
Sbjct: 30 VKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIMKVLN---HPNIVKLFEVIETE 85
Query: 61 AHVCFVMEYAAGGDLMMHI--HADVF-SEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+ VMEYA+GG++ ++ H + E RA F +V +QY H+ I++R ++
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ--IVSAVQYCHQKFIVHR---DLK 140
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
E + + D + +KIADFG E FG++ FCG P
Sbjct: 141 AENL----------------------LLDADMNIKIADFGFSNE-FTFGNKLDAFCGAPP 177
Query: 178 FLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
+ APE+ Y VD W LGV+++ ++ G PF G + +E+ + ++ + R P ++S
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
Query: 237 LEAIAIMRR 245
+ ++++
Sbjct: 238 TDCENLLKK 246
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 125/249 (50%), Gaps = 36/249 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+++ TG+ A++ + K + + ++ L E RI +V N HP +V LF +TE
Sbjct: 30 VKLARHILTGKEVAVRIIDKTQLNS-SSLQKLFREVRIMKVLN---HPNIVKLFEVIETE 85
Query: 61 AHVCFVMEYAAGGDLMMHIHAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+ VMEYA+GG++ ++ A E RA F +V +QY H+ I++R ++
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ--IVSAVQYCHQKFIVHR---DLK 140
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
E + + D + +KIADFG E FG++ FCG+P
Sbjct: 141 AENL----------------------LLDADMNIKIADFGFSNE-FTFGNKLDEFCGSPP 177
Query: 178 FLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
+ APE+ Y VD W LGV+++ ++ G PF G + +E+ + ++ + R P ++S
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
Query: 237 LEAIAIMRR 245
+ ++++
Sbjct: 238 TDCENLLKK 246
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 29/239 (12%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+T E FA K + K ++ + E + E + ++ H +V F+ V V+
Sbjct: 40 DTKEVFAGKIVPKSLLLKPHQREKMSME---ISIHRSLAHQHVVGFHGFFEDNDFVFVVL 96
Query: 68 EYAAGGDLM-MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
E L+ +H +EP A +Y +VLG QYLH +R+I+R +
Sbjct: 97 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR-------------DL 143
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE 186
K+ N +N E VKI DFGL + G+R T CGTP ++APEVL++
Sbjct: 144 KLG-NLFLNEDLE-----------VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK 191
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMRR 245
++ VD W +G +++ +LVG+ PF +E + I +E P+ ++ A +++++
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 250
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 32/247 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+++ TG AIK + K + ++ L E RI ++ N HP +V LF +TE
Sbjct: 31 VKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN---HPNIVKLFEVIETE 86
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ +MEYA+GG++ ++ A E A +V +QY H+ RI++R ++ E
Sbjct: 87 KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHR---DLKAE 143
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + D + +KIADFG E G + FCG P +
Sbjct: 144 NL----------------------LLDADMNIKIADFGFSNE-FTVGGKLDAFCGAPPYA 180
Query: 180 APEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE 238
APE+ Y VD W LGV+++ ++ G PF G + +E+ + ++ + R P ++S +
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD 240
Query: 239 AIAIMRR 245
+++R
Sbjct: 241 CENLLKR 247
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 29/239 (12%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+T E FA K + K ++ + E + E + ++ H +V F+ V V+
Sbjct: 40 DTKEVFAGKIVPKSLLLKPHQREKMSME---ISIHRSLAHQHVVGFHGFFEDNDFVFVVL 96
Query: 68 EYAAGGDLM-MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
E L+ +H +EP A +Y +VLG QYLH +R+I+R +
Sbjct: 97 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR-------------DL 143
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE 186
K+ N +N E VKI DFGL + G+R T CGTP ++APEVL++
Sbjct: 144 KLG-NLFLNEDLE-----------VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK 191
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMRR 245
++ VD W +G +++ +LVG+ PF +E + I +E P+ ++ A +++++
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 250
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 29/239 (12%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+T E FA K + K ++ + E + E + ++ H +V F+ V V+
Sbjct: 44 DTKEVFAGKIVPKSLLLKPHQREKMSME---ISIHRSLAHQHVVGFHGFFEDNDFVFVVL 100
Query: 68 EYAAGGDLM-MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
E L+ +H +EP A +Y +VLG QYLH +R+I+R +
Sbjct: 101 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR-------------DL 147
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE 186
K+ N +N E VKI DFGL + G+R T CGTP ++APEVL++
Sbjct: 148 KLG-NLFLNEDLE-----------VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK 195
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMRR 245
++ VD W +G +++ +LVG+ PF +E + I +E P+ ++ A +++++
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 254
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 112/239 (46%), Gaps = 36/239 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V + + +NT +A+K L K +++ R E E+ + + ++ L FQ E
Sbjct: 90 VAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ---WITALHYAFQDE 146
Query: 61 AHVCFVMEYAAGGDLMMHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITK 118
H+ VM+Y GGDL+ + D E A FY +VL + +H+ ++R
Sbjct: 147 NHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHR------- 199
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-RTGTFCGTPE 177
+IK + L VN G++++ADFG C + G ++ GTP+
Sbjct: 200 -DIK--------------PDNVLLDVN---GHIRLADFGSCLKMNDDGTVQSSVAVGTPD 241
Query: 178 FLAPEVLTET-----SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY 231
+++PE+L Y DWW LGV ++EML GE+PF + E + I+N E R+
Sbjct: 242 YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 300
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 112/239 (46%), Gaps = 36/239 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V + + +NT +A+K L K +++ R E E+ + + ++ L FQ E
Sbjct: 106 VAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ---WITALHYAFQDE 162
Query: 61 AHVCFVMEYAAGGDLMMHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITK 118
H+ VM+Y GGDL+ + D E A FY +VL + +H+ ++R
Sbjct: 163 NHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHR------- 215
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-RTGTFCGTPE 177
+IK + L VN G++++ADFG C + G ++ GTP+
Sbjct: 216 -DIK--------------PDNVLLDVN---GHIRLADFGSCLKMNDDGTVQSSVAVGTPD 257
Query: 178 FLAPEVLTET-----SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY 231
+++PE+L Y DWW LGV ++EML GE+PF + E + I+N E R+
Sbjct: 258 YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 316
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 36/242 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+++ TG A+K + K + ++ L E RI ++ N HP +V LF +TE
Sbjct: 31 VKLARHVLTGREVAVKIIDKTQLNP-TSLQKLFREVRIMKILN---HPNIVKLFEVIETE 86
Query: 61 AHVCFVMEYAAGGDLMMHIHAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+ VMEYA+GG++ ++ A E RA F +V +QY H+ I++R ++
Sbjct: 87 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ--IVSAVQYCHQKYIVHR---DLK 141
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
E + + D + +KIADFG E G++ TFCG+P
Sbjct: 142 AENL----------------------LLDGDMNIKIADFGFSNE-FTVGNKLDTFCGSPP 178
Query: 178 FLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
+ APE+ Y VD W LGV+++ ++ G PF G + +E+ + ++ + R P ++S
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 238
Query: 237 LE 238
+
Sbjct: 239 TD 240
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 29/239 (12%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+T E FA K + K ++ + E + E + ++ H +V F+ V V+
Sbjct: 62 DTKEVFAGKIVPKSLLLKPHQREKMSME---ISIHRSLAHQHVVGFHGFFEDNDFVFVVL 118
Query: 68 EYAAGGDLM-MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
E L+ +H +EP A +Y +VLG QYLH +R+I+R +
Sbjct: 119 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR-------------DL 165
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE 186
K+ N +N E VKI DFGL + G+R CGTP ++APEVL++
Sbjct: 166 KLG-NLFLNEDLE-----------VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK 213
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMRR 245
++ VD W +G +++ +LVG+ PF +E + I +E P+ ++ A +++++
Sbjct: 214 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 272
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 29/239 (12%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+T E FA K + K ++ + E + E + ++ H +V F+ V V+
Sbjct: 38 DTKEVFAGKIVPKSLLLKPHQREKMSME---ISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94
Query: 68 EYAAGGDLM-MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
E L+ +H +EP A +Y +VLG QYLH +R+I+R +
Sbjct: 95 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR-------------DL 141
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE 186
K+ N +N E VKI DFGL + G+R CGTP ++APEVL++
Sbjct: 142 KLG-NLFLNEDLE-----------VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK 189
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMRR 245
++ VD W +G +++ +LVG+ PF +E + I +E P+ ++ A +++++
Sbjct: 190 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 248
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 29/239 (12%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+T E FA K + K ++ + E + E + ++ H +V F+ V V+
Sbjct: 64 DTKEVFAGKIVPKSLLLKPHQREKMSME---ISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120
Query: 68 EYAAGGDLM-MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
E L+ +H +EP A +Y +VLG QYLH +R+I+R +
Sbjct: 121 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR-------------DL 167
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE 186
K+ N +N E VKI DFGL + G+R CGTP ++APEVL++
Sbjct: 168 KLG-NLFLNEDLE-----------VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK 215
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMRR 245
++ VD W +G +++ +LVG+ PF +E + I +E P+ ++ A +++++
Sbjct: 216 KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 274
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 36/239 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V + + +N + FA+K L K +++ R E E+ + ++ ++ L FQ +
Sbjct: 90 VAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS---KWITTLHYAFQDD 146
Query: 61 AHVCFVMEYAAGGDLMMHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITK 118
++ VM+Y GGDL+ + D E A FY A +V+ + +H+ ++R +I
Sbjct: 147 NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR---DIKP 203
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-RTGTFCGTPE 177
+ I + D G++++ADFG C + M G ++ GTP+
Sbjct: 204 DNI----------------------LMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPD 241
Query: 178 FLAPEVLT-----ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY 231
+++PE+L + Y DWW LGV ++EML GE+PF + E + I+N + R+
Sbjct: 242 YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF 300
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 36/249 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+++ TG+ A+K + K + + ++ L E RI +V N HP +V LF +TE
Sbjct: 30 VKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIXKVLN---HPNIVKLFEVIETE 85
Query: 61 AHVCFVMEYAAGGDLMMHIHAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+ V EYA+GG++ ++ A E RA F +V +QY H+ I++R ++
Sbjct: 86 KTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ--IVSAVQYCHQKFIVHR---DLK 140
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
E + + D + +KIADFG E FG++ FCG P
Sbjct: 141 AENL----------------------LLDADXNIKIADFGFSNE-FTFGNKLDAFCGAPP 177
Query: 178 FLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
+ APE+ Y VD W LGV+++ ++ G PF G + +E+ + ++ + R P + S
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXS 237
Query: 237 LEAIAIMRR 245
+ ++++
Sbjct: 238 TDCENLLKK 246
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 31/225 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L + R TG+ FA+K +KK +E+ ++ V ++H +V L +++
Sbjct: 25 VFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIA------VLKKIKHENIVTLEDIYEST 78
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
H VM+ +GG+L I V++E A V+ ++YLHE+ I++R ++ E
Sbjct: 79 THYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHR---DLKPE 135
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + +EN K+ I DFGL K M T CGTP ++
Sbjct: 136 NLLYLTP--EENSKI-----------------MITDFGLSK--MEQNGIMSTACGTPGYV 174
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
APEVL + Y++AVD W +GV+ + +L G PF + E ++F+ I
Sbjct: 175 APEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI 219
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 29 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 85
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G++ + F E R Y + L Y H R+I+R
Sbjct: 86 TRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 138 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTTLCGTLDYL 178
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 240 IAIMRR 245
++ R
Sbjct: 239 RDLISR 244
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 29/232 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L++ + TG+ FA+K + K + ++ S+ +E V ++H +V L +++
Sbjct: 38 VVLAEEKATGKLFAVKCIPKKALKGKES--SIENE---IAVLRKIKHENIVALEDIYESP 92
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
H+ VM+ +GG+L I ++E A V+ + YLH I++R
Sbjct: 93 NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHR-------- 144
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K + + D E + I+DFGL K G GD T CGTP ++
Sbjct: 145 DLK--------------PENLLYYSQDEESKIMISDFGLSKM-EGKGDVMSTACGTPGYV 189
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY 231
APEVL + Y++AVD W +GV+ + +L G PF +++ ++F+ I+ E +
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEF 241
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 33/209 (15%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+TG+ +A+K L K I + L+E+ + + +T PF+V + F T + F++
Sbjct: 212 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL 271
Query: 68 EYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYR--PQSNITKEEIKRI 124
+ GGDL H+ VFSE FYAA ++LGL+++H ++YR +NI
Sbjct: 272 DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI-------- 323
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL 184
+ D G+V+I+D GL + + GT ++APEVL
Sbjct: 324 -------------------LLDEHGHVRISDLGLACDFS--KKKPHASVGTHGYMAPEVL 362
Query: 185 TE-TSYTRAVDWWGLGVLIFEMLVGESPF 212
+ +Y + DW+ LG ++F++L G SPF
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 35/210 (16%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+TG+ +A+K L K I + L+E+ + + +T PF+V + F T + F++
Sbjct: 212 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL 271
Query: 68 EYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYR--PQSNITKEEIKRI 124
+ GGDL H+ VFSE FYAA ++LGL+++H ++YR +NI
Sbjct: 272 DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI-------- 323
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG-TFCGTPEFLAPEV 183
+ D G+V+I+D GL F + GT ++APEV
Sbjct: 324 -------------------LLDEHGHVRISDLGL---ACDFSKKKPHASVGTHGYMAPEV 361
Query: 184 LTE-TSYTRAVDWWGLGVLIFEMLVGESPF 212
L + +Y + DW+ LG ++F++L G SPF
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 35/210 (16%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+TG+ +A+K L K I + L+E+ + + +T PF+V + F T + F++
Sbjct: 212 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL 271
Query: 68 EYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYR--PQSNITKEEIKRI 124
+ GGDL H+ VFSE FYAA ++LGL+++H ++YR +NI
Sbjct: 272 DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI-------- 323
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG-TFCGTPEFLAPEV 183
+ D G+V+I+D GL F + GT ++APEV
Sbjct: 324 -------------------LLDEHGHVRISDLGL---ACDFSKKKPHASVGTHGYMAPEV 361
Query: 184 LTE-TSYTRAVDWWGLGVLIFEMLVGESPF 212
L + +Y + DW+ LG ++F++L G SPF
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 33/209 (15%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+TG+ +A+K L K I + L+E+ + + +T PF+V + F T + F++
Sbjct: 211 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL 270
Query: 68 EYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYR--PQSNITKEEIKRI 124
+ GGDL H+ VFSE FYAA ++LGL+++H ++YR +NI
Sbjct: 271 DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI-------- 322
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL 184
+ D G+V+I+D GL + + GT ++APEVL
Sbjct: 323 -------------------LLDEHGHVRISDLGLACDFS--KKKPHASVGTHGYMAPEVL 361
Query: 185 TE-TSYTRAVDWWGLGVLIFEMLVGESPF 212
+ +Y + DW+ LG ++F++L G SPF
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 41 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 97
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 98 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 149
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 150 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTTLCGTLDYL 190
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 191 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 250
Query: 240 IAIMRR 245
++ R
Sbjct: 251 RDLISR 256
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 30/234 (12%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
+TG AIK + K + V+ + +E +I ++HP ++ L+ F+ +V V+
Sbjct: 34 HTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH---CQLKHPSILELYNYFEDSNYVYLVL 90
Query: 68 EYAAGGDLMMHIHADV--FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
E G++ ++ V FSE A + ++ G+ YLH I++R
Sbjct: 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDL------------ 138
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLT 185
+ + LT N +KIADFGL + ++ T CGTP +++PE+ T
Sbjct: 139 ----------TLSNLLLTRNMN---IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT 185
Query: 186 ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
+++ D W LG + + +L+G PF D + + +V + P FLS+EA
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEA 239
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 25 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 81
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 82 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 133
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 134 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRDTLCGTLDYL 174
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234
Query: 240 IAIMRR 245
++ R
Sbjct: 235 RDLISR 240
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 27 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 83
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 84 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 135
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 136 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTTLCGTLDYL 176
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 240 IAIMRR 245
++ R
Sbjct: 237 RDLISR 242
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 29 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 85
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 86 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 138 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTTLCGTLDYL 178
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 240 IAIMRR 245
++ R
Sbjct: 239 RDLISR 244
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 50 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 106
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 107 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 158
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 159 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTTLCGTLDYL 199
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 259
Query: 240 IAIMRR 245
++ R
Sbjct: 260 RDLISR 265
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 27 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 83
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 84 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 135
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 136 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTTLCGTLDYL 176
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 240 IAIMRR 245
++ R
Sbjct: 237 RDLISR 242
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 24 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 80
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 81 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 132
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 133 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTTLCGTLDYL 173
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 240 IAIMRR 245
++ R
Sbjct: 234 RDLISR 239
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 29 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 85
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 86 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 138 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTTLCGTLDYL 178
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE + + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 179 PPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 240 IAIMRR 245
++ R
Sbjct: 239 RDLISR 244
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 23 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 79
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 80 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 131
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 132 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTTLCGTLDYL 172
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 232
Query: 240 IAIMRR 245
++ R
Sbjct: 233 RDLISR 238
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 28 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 84
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 85 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 136
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 137 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTTLCGTLDYL 177
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 237
Query: 240 IAIMRR 245
++ R
Sbjct: 238 RDLISR 243
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 29/228 (12%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
++TG+ +A K LKK +D +L E + E+A + P ++NL ++ + + +
Sbjct: 51 KSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSC--PRVINLHEVYENTSEIILI 107
Query: 67 MEYAAGGD---LMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+EYAAGG+ L + A++ SE + ++ G+ YLH Q+NI ++K
Sbjct: 108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH--------QNNIVHLDLK- 158
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
Q I L+ G +KI DFG+ ++ +G GTPE+LAPE+
Sbjct: 159 -------------PQNILLSSIYPLGDIKIVDFGMSRK-IGHACELREIMGTPEYLAPEI 204
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY 231
L T A D W +G++ + +L SPF G+D +E + +I V Y
Sbjct: 205 LNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 27 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 83
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 84 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 135
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 136 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRAALCGTLDYL 176
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 240 IAIMRR 245
++ R
Sbjct: 237 RDLISR 242
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 21 VYLAREKQRKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 77
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 78 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 129
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 130 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTTLCGTLDYL 170
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 230
Query: 240 IAIMRR 245
++ R
Sbjct: 231 RDLISR 236
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 24 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 80
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 81 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 132
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 133 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRAALCGTLDYL 173
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 240 IAIMRR 245
++ R
Sbjct: 234 RDLISR 239
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ +N+ A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 24 VYLAREKNSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDS 80
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H ++I+R
Sbjct: 81 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHR-------- 132
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 133 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRAALCGTLDYL 173
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + ++ + I E +P F++ A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGA 233
Query: 240 IAIMRR 245
++ R
Sbjct: 234 RDLISR 239
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 26 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 82
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 83 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 134
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIA+FG R T CGT ++L
Sbjct: 135 DIK------PENLLLGSA-----------GELKIANFGWSVHAPS--SRRTTLCGTLDYL 175
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 176 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 235
Query: 240 IAIMRR 245
++ R
Sbjct: 236 RDLISR 241
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 37/250 (14%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSE--KRIFEVANTMRHPFLVNLFACFQTEAHVC 64
R TG+ FA+K + D+ L +E KR + + ++HP +V L + ++ +
Sbjct: 46 RETGQQFAVKIV---DVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102
Query: 65 FVMEYAAGGDLMMHI--HAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V E+ G DL I AD V+SE A Y ++ L+Y H++ II+R
Sbjct: 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHR-------- 154
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K + + L + VK+ DFG+ + G G GTP F+
Sbjct: 155 DVK--------------PENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFM 200
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY-PR---FL 235
APEV+ Y + VD WG GV++F +L G PF G +E +F+ I+ + + PR +
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHI 259
Query: 236 SLEAIAIMRR 245
S A ++RR
Sbjct: 260 SESAKDLVRR 269
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 27 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 83
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 84 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 135
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIA+FG R T CGT ++L
Sbjct: 136 DIK------PENLLLGSA-----------GELKIANFGWSVHAPS--SRRTTLCGTLDYL 176
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 240 IAIMRR 245
++ R
Sbjct: 237 RDLISR 242
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 26 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 82
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 83 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 134
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 135 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRXXLCGTLDYL 175
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 176 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 235
Query: 240 IAIMRR 245
++ R
Sbjct: 236 RDLISR 241
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 50 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 106
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 107 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 158
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 159 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRDDLCGTLDYL 199
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 259
Query: 240 IAIMRR 245
++ R
Sbjct: 260 RDLISR 265
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 25 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 81
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 82 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 133
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 134 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTDLCGTLDYL 174
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234
Query: 240 IAIMRR 245
++ R
Sbjct: 235 RDLISR 240
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 24 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 80
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 81 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 132
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 133 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTXLCGTLDYL 173
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 240 IAIMRR 245
++ R
Sbjct: 234 RDLISR 239
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 29 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 85
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 86 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 138 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTDLCGTLDYL 178
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 240 IAIMRR 245
++ R
Sbjct: 239 RDLISR 244
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 109/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ R + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 28 VYLARERQSKFILALKVLFKTQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 84
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 85 TRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHR-------- 136
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 137 DIK------PENLLLGSN-----------GELKIADFGWSVHAPS--SRRDTLCGTLDYL 177
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG PF +E + I E +P F++ A
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA 237
Query: 240 IAIMRR 245
++ R
Sbjct: 238 RDLISR 243
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 27 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 83
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 84 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 135
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 136 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRXXLCGTLDYL 176
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 240 IAIMRR 245
++ R
Sbjct: 237 RDLISR 242
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 24 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 80
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 81 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 132
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 133 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTDLCGTLDYL 173
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 240 IAIMRR 245
++ R
Sbjct: 234 RDLISR 239
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 24 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 80
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 81 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 132
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 133 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTDLCGTLDYL 173
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 240 IAIMRR 245
++ R
Sbjct: 234 RDLISR 239
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 109/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ R + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 28 VYLARERQSKFILALKVLFKTQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 84
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 85 TRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHR-------- 136
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T CGT ++L
Sbjct: 137 DIK------PENLLLGSN-----------GELKIADFGWSVHAPS--SRRTTLCGTLDYL 177
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG PF +E + I E +P F++ A
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA 237
Query: 240 IAIMRR 245
++ R
Sbjct: 238 RDLISR 243
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 42/250 (16%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V + + + TG+ +A+K + K D++ R EV E+ + + N R ++ L FQ E
Sbjct: 77 VAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDV--LVNGDRR-WITQLHFAFQDE 133
Query: 61 AHVCFVMEYAAGGDLMMHIH--ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITK 118
++ VMEY GGDL+ + + A FY A +V+ + +H ++R +I
Sbjct: 134 NYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHR---DIKP 190
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-RTGTFCGTPE 177
+ I + D G++++ADFG C + G R+ GTP+
Sbjct: 191 DNI----------------------LLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPD 228
Query: 178 FLAPEVLTETSYTRA-------VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR 230
+L+PE+L DWW LGV +EM G++PF D E + IV+
Sbjct: 229 YLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH---- 284
Query: 231 YPRFLSLEAI 240
Y LSL +
Sbjct: 285 YKEHLSLPLV 294
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 24 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 80
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 81 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 132
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 133 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRXXLCGTLDYL 173
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 240 IAIMRR 245
++ R
Sbjct: 234 RDLISR 239
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 24 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 80
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 81 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 132
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 133 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRTELCGTLDYL 173
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 240 IAIMRR 245
++ R
Sbjct: 234 RDLISR 239
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 27 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 83
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 84 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 135
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R CGT ++L
Sbjct: 136 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRDDLCGTLDYL 176
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 240 IAIMRR 245
++ R
Sbjct: 237 RDLISR 242
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 31/237 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + A+K L K + ++ VE L +R E+ + +RHP ++ ++ F
Sbjct: 30 VYLAREKQNKFIMALKVLFKSQL-EKEGVEHQL--RREIEIQSHLRHPNILRMYNYFHDR 86
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ ++E+A G+L + F E R+ + + L Y HE ++I+R +I E
Sbjct: 87 KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHR---DIKPE 143
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + +G +KIADFG R CGT ++L
Sbjct: 144 NL----------------------LMGYKGELKIADFGWSVHAPSL--RRRXMCGTLDYL 179
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
PE++ ++ VD W GVL +E LVG PF E IVN ++++P FLS
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLS 236
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 31/237 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + A+K L K + ++ VE L +R E+ + +RHP ++ ++ F
Sbjct: 31 VYLAREKQNKFIMALKVLFKSQL-EKEGVEHQL--RREIEIQSHLRHPNILRMYNYFHDR 87
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ ++E+A G+L + F E R+ + + L Y HE ++I+R +I E
Sbjct: 88 KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHR---DIKPE 144
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + +G +KIADFG R CGT ++L
Sbjct: 145 NL----------------------LMGYKGELKIADFGWSVHAPSL--RRRXMCGTLDYL 180
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
PE++ ++ VD W GVL +E LVG PF E IVN ++++P FLS
Sbjct: 181 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLS 237
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 31/237 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + A+K L K + ++ VE L +R E+ + +RHP ++ ++ F
Sbjct: 30 VYLAREKQNKFIMALKVLFKSQL-EKEGVEHQL--RREIEIQSHLRHPNILRMYNYFHDR 86
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ ++E+A G+L + F E R+ + + L Y HE ++I+R +I E
Sbjct: 87 KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHR---DIKPE 143
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + +G +KIADFG R CGT ++L
Sbjct: 144 NL----------------------LMGYKGELKIADFGWSVHAPSL--RRRXMCGTLDYL 179
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
PE++ ++ VD W GVL +E LVG PF E IVN ++++P FLS
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLS 236
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 25 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 81
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G + + F E R Y + L Y H R+I+R
Sbjct: 82 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 133
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R T GT ++L
Sbjct: 134 DIK------PENLLLGSA-----------GELKIADFGWSCHAPS--SRRTTLSGTLDYL 174
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234
Query: 240 IAIMRR 245
++ R
Sbjct: 235 RDLISR 240
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 33/226 (14%)
Query: 3 LSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH 62
L + + + E A+K +++G+ IA + +++ + ++RHP +V T H
Sbjct: 37 LMRDKQSNELVAVKYIERGEKIAANVKREIINHR-------SLRHPNIVRFKEVILTPTH 89
Query: 63 VCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEI 121
+ VMEYA+GG+L I +A FSE A F+ ++ G+ Y H ++ +R
Sbjct: 90 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR---------- 139
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAP 181
+ K+ EN ++ S +L KI DFG K + T GTP ++AP
Sbjct: 140 ---DLKL-ENTLLDGSPAPRL---------KICDFGYSKSSVLHSQPKST-VGTPAYIAP 185
Query: 182 EVLTETSYT-RAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN 226
EVL + Y + D W GV ++ MLVG PF +E + F ++
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 231
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K + + VE L +R E+ + +RHP ++ L+ F
Sbjct: 29 VYLAREKQSKFILALKVLFKAQL-EKAGVEHQL--RREVEIQSHLRHPNILRLYGYFHDA 85
Query: 61 AHVCFVMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++EYA G++ + F E R Y + L Y H R+I+R
Sbjct: 86 TRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHR-------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + S+ G +KIADFG R GT ++L
Sbjct: 138 DIK------PENLLLGSA-----------GELKIADFGWSVHAPS--SRRXXLXGTLDYL 178
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 239
PE++ + VD W LGVL +E LVG+ PF + +E + I E +P F++ A
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 240 IAIMRR 245
++ R
Sbjct: 239 RDLISR 244
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 38/250 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+ + TG+ A+K + K ++A+ +++ + +R +RHP ++ L+ +++
Sbjct: 30 VKLAYHTTTGQKVALKIINK-KVLAKSDMQGRI--EREISYLRLLRHPHIIKLYDVIKSK 86
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYR---PQSNI 116
+ V+EY AG +L +I D SE A + ++ ++Y H +I++R P++ +
Sbjct: 87 DEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL 145
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP 176
E + VKIADFGL M G+ T CG+P
Sbjct: 146 LDEHLN----------------------------VKIADFGLSNI-MTDGNFLKTSCGSP 176
Query: 177 EFLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFL 235
+ APEV++ Y VD W GV+++ ML PF + +F +I N P+FL
Sbjct: 177 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL 236
Query: 236 SLEAIAIMRR 245
S A +++R
Sbjct: 237 SPGAAGLIKR 246
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 38/250 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+ + TG+ A+K + K ++A+ +++ + +R +RHP ++ L+ +++
Sbjct: 29 VKLAYHTTTGQKVALKIINK-KVLAKSDMQGRI--EREISYLRLLRHPHIIKLYDVIKSK 85
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYR---PQSNI 116
+ V+EY AG +L +I D SE A + ++ ++Y H +I++R P++ +
Sbjct: 86 DEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL 144
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP 176
E + VKIADFGL M G+ T CG+P
Sbjct: 145 LDEHLN----------------------------VKIADFGLSNI-MTDGNFLKTSCGSP 175
Query: 177 EFLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFL 235
+ APEV++ Y VD W GV+++ ML PF + +F +I N P+FL
Sbjct: 176 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL 235
Query: 236 SLEAIAIMRR 245
S A +++R
Sbjct: 236 SPGAAGLIKR 245
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 33/226 (14%)
Query: 3 LSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH 62
L + + E A+K +++G+ I + +++ + ++RHP +V T H
Sbjct: 37 LMRDKQANELVAVKYIERGEKIDENVKREIINHR-------SLRHPNIVRFKEVILTPTH 89
Query: 63 VCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEI 121
+ VMEYA+GG+L I +A FSE A F+ ++ G+ Y H ++ +R
Sbjct: 90 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHR---------- 139
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAP 181
+ K+ EN ++ S +L KIADFG K + + + GTP ++AP
Sbjct: 140 ---DLKL-ENTLLDGSPAPRL---------KIADFGYSKASV-LHSQPKSAVGTPAYIAP 185
Query: 182 EVLTETSYT-RAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN 226
EVL + Y + D W GV ++ MLVG PF +E + F ++
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 231
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 38/250 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+ + TG+ A+K + K ++A+ +++ + +R +RHP ++ L+ +++
Sbjct: 20 VKLAYHTTTGQKVALKIINK-KVLAKSDMQGRI--EREISYLRLLRHPHIIKLYDVIKSK 76
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYR---PQSNI 116
+ V+EY AG +L +I D SE A + ++ ++Y H +I++R P++ +
Sbjct: 77 DEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL 135
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP 176
E + VKIADFGL M G+ T CG+P
Sbjct: 136 LDEHLN----------------------------VKIADFGLSNI-MTDGNFLKTSCGSP 166
Query: 177 EFLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFL 235
+ APEV++ Y VD W GV+++ ML PF + +F +I N P+FL
Sbjct: 167 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL 226
Query: 236 SLEAIAIMRR 245
S A +++R
Sbjct: 227 SPGAAGLIKR 236
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 38/250 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L+ + TG+ A+K + K ++A+ +++ + +R +RHP ++ L+ +++
Sbjct: 24 VKLAYHTTTGQKVALKIINK-KVLAKSDMQGRI--EREISYLRLLRHPHIIKLYDVIKSK 80
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYR---PQSNI 116
+ V+EY AG +L +I D SE A + ++ ++Y H +I++R P++ +
Sbjct: 81 DEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL 139
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP 176
E + VKIADFGL M G+ T CG+P
Sbjct: 140 LDEHLN----------------------------VKIADFGLSNI-MTDGNFLKTSCGSP 170
Query: 177 EFLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFL 235
+ APEV++ Y VD W GV+++ ML PF + +F +I N P+FL
Sbjct: 171 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL 230
Query: 236 SLEAIAIMRR 245
S A +++R
Sbjct: 231 SPGAAGLIKR 240
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 37/250 (14%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSE--KRIFEVANTMRHPFLVNLFACFQTEAHVC 64
R TG+ FA+K + D+ L +E KR + + ++HP +V L + ++ +
Sbjct: 48 RETGQQFAVKIV---DVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 104
Query: 65 FVMEYAAGGDLMMHI--HAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V E+ G DL I AD V+SE A Y ++ L+Y H++ II+R
Sbjct: 105 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHR-------- 156
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K + L + VK+ FG+ + G G GTP F+
Sbjct: 157 DVK--------------PHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFM 202
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY-PR---FL 235
APEV+ Y + VD WG GV++F +L G PF G +E +F+ I+ + + PR +
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHI 261
Query: 236 SLEAIAIMRR 245
S A ++RR
Sbjct: 262 SESAKDLVRR 271
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 37/250 (14%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSE--KRIFEVANTMRHPFLVNLFACFQTEAHVC 64
R TG+ FA+K + D+ L +E KR + + ++HP +V L + ++ +
Sbjct: 46 RETGQQFAVKIV---DVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102
Query: 65 FVMEYAAGGDLMMHI--HAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V E+ G DL I AD V+SE A Y ++ L+Y H++ II+R
Sbjct: 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHR-------- 154
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K + L + VK+ FG+ + G G GTP F+
Sbjct: 155 DVK--------------PHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFM 200
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY-PR---FL 235
APEV+ Y + VD WG GV++F +L G PF G +E +F+ I+ + + PR +
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHI 259
Query: 236 SLEAIAIMRR 245
S A ++RR
Sbjct: 260 SESAKDLVRR 269
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 33/226 (14%)
Query: 3 LSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH 62
L + + + E A+K +++G+ I + +++ + ++RHP +V T H
Sbjct: 36 LMRDKQSNELVAVKYIERGEKIDENVKREIINHR-------SLRHPNIVRFKEVILTPTH 88
Query: 63 VCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEI 121
+ VMEYA+GG+L I +A FSE A F+ ++ G+ Y H ++ +R
Sbjct: 89 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR---------- 138
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAP 181
+ K+ EN ++ S +L KI DFG K + T GTP ++AP
Sbjct: 139 ---DLKL-ENTLLDGSPAPRL---------KICDFGYSKSSVLHSQPKST-VGTPAYIAP 184
Query: 182 EVLTETSYT-RAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN 226
EVL + Y + D W GV ++ MLVG PF +E + F ++
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 230
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
++ TG FA K + + ARD + L E RI ++HP +V L Q E+
Sbjct: 50 HKTTGLEFAAKIINTKKLSARD-FQKLEREARI---CRKLQHPNIVRLHDSIQEESFHYL 105
Query: 66 VMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
V + GG+L I A + +SE A ++ + Y H + I++R N+ E +
Sbjct: 106 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHR---NLKPENL--- 159
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGY-VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
L + +G VK+ADFGL E + + F GTP +L+PEV
Sbjct: 160 -----------------LLASKAKGAAVKLADFGLAIE-VNDSEAWHGFAGTPGYLSPEV 201
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
L + Y++ VD W GV+++ +LVG PF +D+ ++ I YP
Sbjct: 202 LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP 250
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
++ TG FA K + + ARD + L E RI ++HP +V L Q E+
Sbjct: 27 HKTTGLEFAAKIINTKKLSARD-FQKLEREARI---CRKLQHPNIVRLHDSIQEESFHYL 82
Query: 66 VMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
V + GG+L I A + +SE A ++ + Y H + I++R N+ E +
Sbjct: 83 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHR---NLKPENL--- 136
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGY-VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
L + +G VK+ADFGL E + + F GTP +L+PEV
Sbjct: 137 -----------------LLASKAKGAAVKLADFGLAIE-VNDSEAWHGFAGTPGYLSPEV 178
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
L + Y++ VD W GV+++ +LVG PF +D+ ++ I YP
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP 227
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
++ TG FA K + + ARD + L E RI ++HP +V L Q E+
Sbjct: 26 HKTTGLEFAAKIINTKKLSARD-FQKLEREARI---CRKLQHPNIVRLHDSIQEESFHYL 81
Query: 66 VMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
V + GG+L I A + +SE A ++ + Y H + I++R N+ E +
Sbjct: 82 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHR---NLKPENL--- 135
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGY-VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
L + +G VK+ADFGL E + + F GTP +L+PEV
Sbjct: 136 -----------------LLASKAKGAAVKLADFGLAIE-VNDSEAWHGFAGTPGYLSPEV 177
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
L + Y++ VD W GV+++ +LVG PF +D+ ++ I YP
Sbjct: 178 LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP 226
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
++ TG FA K + + ARD + L E RI ++HP +V L Q E+
Sbjct: 27 HKTTGLEFAAKIINTKKLSARD-FQKLEREARI---CRKLQHPNIVRLHDSIQEESFHYL 82
Query: 66 VMEYAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
V + GG+L I A + +SE A ++ + Y H + I++R N+ E +
Sbjct: 83 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHR---NLKPENL--- 136
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGY-VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
L + +G VK+ADFGL E + + F GTP +L+PEV
Sbjct: 137 -----------------LLASKAKGAAVKLADFGLAIE-VNDSEAWHGFAGTPGYLSPEV 178
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
L + Y++ VD W GV+++ +LVG PF +D+ ++ I YP
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP 227
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 115/232 (49%), Gaps = 29/232 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL++ + T + AIK + K + ++ S + V + ++HP +V L +++
Sbjct: 34 VILAEDKRTQKLVAIKCIAKKALEGKEG-----SMENEIAVLHKIKHPNIVALDDIYESG 88
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
H+ +M+ +GG+L I ++E A V+ ++YLH+ I++R
Sbjct: 89 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR-------- 140
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K EN S D + + I+DFGL K G T CGTP ++
Sbjct: 141 DLK------PENLLYYSL--------DEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYV 185
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY 231
APEVL + Y++AVD W +GV+ + +L G PF +++ ++F+ I+ E +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 237
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 115/232 (49%), Gaps = 29/232 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL++ + T + AIK + K + ++ S + V + ++HP +V L +++
Sbjct: 34 VILAEDKRTQKLVAIKCIAKEALEGKEG-----SMENEIAVLHKIKHPNIVALDDIYESG 88
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
H+ +M+ +GG+L I ++E A V+ ++YLH+ I++R
Sbjct: 89 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR-------- 140
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K EN S D + + I+DFGL K G T CGTP ++
Sbjct: 141 DLK------PENLLYYSL--------DEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYV 185
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY 231
APEVL + Y++AVD W +GV+ + +L G PF +++ ++F+ I+ E +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 237
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 32/219 (14%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVME 68
TG A K +K + ++EV++ +S V N + H L+ L+ F+++ + VME
Sbjct: 113 TGLKLAAKIIKTRGMKDKEEVKNEIS------VMNQLDHANLIQLYDAFESKNDIVLVME 166
Query: 69 YAAGGDLMMHIHADVF--SEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
Y GG+L I + + +E + + + G++++H+ I++ ++ E I
Sbjct: 167 YVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHL---DLKPENI----- 218
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE 186
L VN +KI DFGL + F GTPEFLAPEV+
Sbjct: 219 ---------------LCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNY 262
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
+ D W +GV+ + +L G SPF GD++ E ++I+
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNIL 301
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 115/232 (49%), Gaps = 29/232 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL++ + T + AIK + K + ++ S + V + ++HP +V L +++
Sbjct: 34 VILAEDKRTQKLVAIKCIAKEALEGKEG-----SMENEIAVLHKIKHPNIVALDDIYESG 88
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
H+ +M+ +GG+L I ++E A V+ ++YLH+ I++R
Sbjct: 89 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR-------- 140
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K EN S D + + I+DFGL K G T CGTP ++
Sbjct: 141 DLK------PENLLYYSL--------DEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYV 185
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY 231
APEVL + Y++AVD W +GV+ + +L G PF +++ ++F+ I+ E +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 237
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 115/232 (49%), Gaps = 29/232 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL++ + T + AIK + K + ++ S + V + ++HP +V L +++
Sbjct: 34 VILAEDKRTQKLVAIKCIAKEALEGKEG-----SMENEIAVLHKIKHPNIVALDDIYESG 88
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
H+ +M+ +GG+L I ++E A V+ ++YLH+ I++R
Sbjct: 89 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR-------- 140
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K EN S D + + I+DFGL K G T CGTP ++
Sbjct: 141 DLK------PENLLYYSL--------DEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYV 185
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY 231
APEVL + Y++AVD W +GV+ + +L G PF +++ ++F+ I+ E +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 237
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 35/216 (16%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVME 68
T E A+K +++G I + +++ + ++RHP +V T H+ +ME
Sbjct: 44 TKELVAVKYIERGAAIDENVQREIINHR-------SLRHPNIVRFKEVILTPTHLAIIME 96
Query: 69 YAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAK 127
YA+GG+L I +A FSE A F+ ++ G+ Y H +I +R + K
Sbjct: 97 YASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHR-------------DLK 143
Query: 128 VQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET 187
+ EN ++ S +L KI DFG K + T GTP ++APEVL
Sbjct: 144 L-ENTLLDGSPAPRL---------KICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLRQ 192
Query: 188 SYT-RAVDWWGLGVLIFEMLVGESPFPGDDEEEVFD 222
Y + D W GV ++ MLVG PF +D EE D
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYPF--EDPEEPRD 226
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 33/226 (14%)
Query: 3 LSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH 62
L + + + E A+K +++G+ I + +++ + ++RHP +V T H
Sbjct: 37 LMRDKQSNELVAVKYIERGEKIDENVKREIINHR-------SLRHPNIVRFKEVILTPTH 89
Query: 63 VCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEI 121
+ VMEYA+GG+L I +A FSE A F+ ++ G+ Y H ++ +R
Sbjct: 90 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR---------- 139
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAP 181
+ K+ EN ++ S +L KI FG K + T GTP ++AP
Sbjct: 140 ---DLKL-ENTLLDGSPAPRL---------KICAFGYSKSSVLHSQPKST-VGTPAYIAP 185
Query: 182 EVLTETSYT-RAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN 226
EVL + Y + D W GV ++ MLVG PF +E + F ++
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 231
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 35/248 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V + ++ TG A+K L + I + D V + +R + RHP ++ L+ T
Sbjct: 32 VKVGKHELTGHKVAVKILNRQKIRSLDVVGKI---RREIQNLKLFRHPHIIKLYQVISTP 88
Query: 61 AHVCFVMEYAAGGDLMMHIHADVF---SEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+ + VMEY +GG+L +I + E R +F ++ G+ Y H +++R ++
Sbjct: 89 SDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQ--ILSGVDYCHRHMVVHR---DLK 143
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
E + + D KIADFGL M G+ CG+P
Sbjct: 144 PENV----------------------LLDAHMNAKIADFGLS-NMMSDGEFLRXSCGSPN 180
Query: 178 FLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
+ APEV++ Y VD W GV+++ +L G PF D +F I + P++L+
Sbjct: 181 YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLN 240
Query: 237 LEAIAIMR 244
I++++
Sbjct: 241 PSVISLLK 248
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 33/226 (14%)
Query: 3 LSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH 62
L + + + E A+K +++G+ I + +++ + ++RHP +V T H
Sbjct: 37 LMRDKQSNELVAVKYIERGEKIDENVKREIINHR-------SLRHPNIVRFKEVILTPTH 89
Query: 63 VCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEI 121
+ VMEYA+GG+L I +A FSE A F+ ++ G+ Y H ++ +R
Sbjct: 90 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR---------- 139
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAP 181
+ K+ EN ++ S +L KI FG K + T GTP ++AP
Sbjct: 140 ---DLKL-ENTLLDGSPAPRL---------KICAFGYSKSSVLHSQPKDT-VGTPAYIAP 185
Query: 182 EVLTETSYT-RAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN 226
EVL + Y + D W GV ++ MLVG PF +E + F ++
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH 231
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 35/227 (15%)
Query: 5 QYRNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ 58
+ + TG+ +A K +KK + ++R+E+E R + +RHP ++ L F+
Sbjct: 25 RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE------REVNILREIRHPNIITLHDIFE 78
Query: 59 TEAHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+ V ++E +GG+L + + +E A + ++ G+ YLH RI +
Sbjct: 79 NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH------- 131
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
+ + + L N +K+ DFG+ + + G+ GTPE
Sbjct: 132 --------------FDLKPENIMLLDKNVPNPRIKLIDFGIAHK-IEAGNEFKNIFGTPE 176
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
F+APE++ D W +GV+ + +L G SPF G+ ++E +I
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI 223
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 35/227 (15%)
Query: 5 QYRNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ 58
+ + TG+ +A K +KK + ++R+E+E R + +RHP ++ L F+
Sbjct: 46 RQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE------REVNILREIRHPNIITLHDIFE 99
Query: 59 TEAHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+ V ++E +GG+L + + +E A + ++ G+ YLH RI +
Sbjct: 100 NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH------- 152
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
+ + + L N +K+ DFG+ + + G+ GTPE
Sbjct: 153 --------------FDLKPENIMLLDKNVPNPRIKLIDFGIAHK-IEAGNEFKNIFGTPE 197
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
F+APE++ D W +GV+ + +L G SPF G+ ++E +I
Sbjct: 198 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI 244
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 35/225 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
+ TG+ +A K +KK + ++R+E+E R + +RHP ++ L F+ +
Sbjct: 34 KGTGKEYAAKFIKKRRLSSSRRGVSREEIE------REVNILREIRHPNIITLHDIFENK 87
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E +GG+L + + +E A + ++ G+ YLH RI +
Sbjct: 88 TDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH--------- 138
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N +K+ DFG+ + + G+ GTPEF+
Sbjct: 139 ------------FDLKPENIMLLDKNVPNPRIKLIDFGIAHK-IEAGNEFKNIFGTPEFV 185
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
APE++ D W +GV+ + +L G SPF G+ ++E +I
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI 230
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E +S + ++HP ++ L ++ +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ILKEIQHPNVITLHEVYENK 86
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTPEF+
Sbjct: 138 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFV 184
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 238 EAIA 241
A+A
Sbjct: 245 SALA 248
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E +S + ++HP ++ L ++ +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ILKEIQHPNVITLHEVYENK 86
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTPEF+
Sbjct: 138 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFV 184
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 238 EAIA 241
A+A
Sbjct: 245 SALA 248
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E +S + ++HP ++ L ++ +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ILKEIQHPNVITLHEVYENK 86
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTPEF+
Sbjct: 138 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFV 184
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 238 EAIA 241
A+A
Sbjct: 245 SALA 248
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E +S + ++HP ++ L ++ +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ILKEIQHPNVITLHEVYENK 86
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTPEF+
Sbjct: 138 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFV 184
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 238 EAIA 241
A+A
Sbjct: 245 SALA 248
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E +S + ++HP ++ L ++ +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ILKEIQHPNVITLHEVYENK 86
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTPEF+
Sbjct: 138 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFV 184
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 238 EAIA 241
A+A
Sbjct: 245 SALA 248
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E +S + ++HP ++ L ++ +
Sbjct: 32 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ILKEIQHPNVITLHEVYENK 85
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 86 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 136
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTPEF+
Sbjct: 137 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFV 183
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 238 EAIA 241
A+A
Sbjct: 244 SALA 247
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E +S + ++HP ++ L ++ +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ILKEIQHPNVITLHEVYENK 86
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTPEF+
Sbjct: 138 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFV 184
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 238 EAIA 241
A+A
Sbjct: 245 SALA 248
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E +S + ++HP ++ L ++ +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ILKEIQHPNVITLHEVYENK 86
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTPEF+
Sbjct: 138 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFV 184
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 238 EAIA 241
A+A
Sbjct: 245 SALA 248
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E +S + ++HP ++ L ++ +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ILKEIQHPNVITLHEVYENK 86
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTPEF+
Sbjct: 138 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFV 184
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 238 EAIA 241
A+A
Sbjct: 245 SALA 248
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E +S + ++HP ++ L ++ +
Sbjct: 32 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ILKEIQHPNVITLHEVYENK 85
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 86 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 136
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTPEF+
Sbjct: 137 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFV 183
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 238 EAIA 241
A+A
Sbjct: 244 SALA 247
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E +S + ++HP ++ L ++ +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ILKEIQHPNVITLHEVYENK 86
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTPEF+
Sbjct: 138 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFV 184
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 238 EAIA 241
A+A
Sbjct: 245 SALA 248
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E +S + ++HP ++ L ++ +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ILKEIQHPNVITLHEVYENK 86
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTPEF+
Sbjct: 138 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFV 184
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 238 EAIA 241
A+A
Sbjct: 245 SALA 248
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVME 68
TG+ +A K + + ARD + L E RI + ++HP +V L E V +
Sbjct: 28 TGQEYAAKIINTKKLSARDH-QKLEREARICRL---LKHPNIVRLHDSISEEGFHYLVFD 83
Query: 69 YAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAK 127
GG+L I A + +SE A ++ + + H + I++R ++K
Sbjct: 84 LVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHR--------DLK----- 130
Query: 128 VQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET 187
+ + L VK+ADFGL E G F GTP +L+PEVL +
Sbjct: 131 ---------PENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 188 SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
Y + VD W GV+++ +LVG PF +D+ ++ I +P
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 226
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVME 68
TG+ +A K + + ARD + L E RI + ++HP +V L E V +
Sbjct: 28 TGQEYAAKIINTKKLSARDH-QKLEREARICRL---LKHPNIVRLHDSISEEGFHYLVFD 83
Query: 69 YAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAK 127
GG+L I A + +SE A ++ + + H + I++R ++K
Sbjct: 84 LVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHR--------DLK----- 130
Query: 128 VQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET 187
+ + L VK+ADFGL E G F GTP +L+PEVL +
Sbjct: 131 ---------PENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 188 SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
Y + VD W GV+++ +LVG PF +D+ ++ I +P
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 226
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGD--IIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ 58
V L+ R T + AIK + K I + E + L+ + E+ + HP ++ + F
Sbjct: 26 VKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
E + V+E GG+L + + E Y ++L +QYLHE+ II+R
Sbjct: 86 AEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR------ 138
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
++K EN ++S +E + +KI DFG K +G T CGTP
Sbjct: 139 --DLK------PENVLLSSQEE--------DCLIKITDFGHSK-ILGETSLMRTLCGTPT 181
Query: 178 FLAPEVLTE---TSYTRAVDWWGLGVLIFEMLVGESPF 212
+LAPEVL Y RAVD W LGV++F L G PF
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGD--IIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ 58
V L+ R T + AIK + K I + E + L+ + E+ + HP ++ + F
Sbjct: 26 VKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
E + V+E GG+L + + E Y ++L +QYLHE+ II+R
Sbjct: 86 AEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR------ 138
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
++K EN ++S +E + +KI DFG K +G T CGTP
Sbjct: 139 --DLK------PENVLLSSQEE--------DCLIKITDFGHSK-ILGETSLMRTLCGTPT 181
Query: 178 FLAPEVLTE---TSYTRAVDWWGLGVLIFEMLVGESPF 212
+LAPEVL Y RAVD W LGV++F L G PF
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGD--IIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ 58
V L+ R T + AIK + K I + E + L+ + E+ + HP ++ + F
Sbjct: 26 VKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
E + V+E GG+L + + E Y ++L +QYLHE+ II+R
Sbjct: 86 AEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR------ 138
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
++K EN ++S +E + +KI DFG K +G T CGTP
Sbjct: 139 --DLK------PENVLLSSQEE--------DCLIKITDFGHSK-ILGETSLMRTLCGTPT 181
Query: 178 FLAPEVLTE---TSYTRAVDWWGLGVLIFEMLVGESPF 212
+LAPEVL Y RAVD W LGV++F L G PF
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGD--IIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ 58
V L+ R T + AIK + K I + E + L+ + E+ + HP ++ + F
Sbjct: 25 VKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 84
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
E + V+E GG+L + + E Y ++L +QYLHE+ II+R
Sbjct: 85 AEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR------ 137
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
++K EN ++S +E + +KI DFG K +G T CGTP
Sbjct: 138 --DLK------PENVLLSSQEE--------DCLIKITDFGHSK-ILGETSLMRTLCGTPT 180
Query: 178 FLAPEVLTE---TSYTRAVDWWGLGVLIFEMLVGESPF 212
+LAPEVL Y RAVD W LGV++F L G PF
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGD--IIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ 58
V L+ R T + AIK + K I + E + L+ + E+ + HP ++ + F
Sbjct: 32 VKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 91
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
E + V+E GG+L + + E Y ++L +QYLHE+ II+R
Sbjct: 92 AEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR------ 144
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
++K EN ++S +E + +KI DFG K +G T CGTP
Sbjct: 145 --DLK------PENVLLSSQEE--------DCLIKITDFGHSK-ILGETSLMRTLCGTPT 187
Query: 178 FLAPEVLTE---TSYTRAVDWWGLGVLIFEMLVGESPF 212
+LAPEVL Y RAVD W LGV++F L G PF
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 33/228 (14%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVME 68
G+ +A K + + ARD + L E RI + ++HP +V L E H + +
Sbjct: 46 AGQEYAAKIINTKKLSARDH-QKLEREARICRL---LKHPNIVRLHDSISEEGHHYLIFD 101
Query: 69 YAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYR---PQSNITKEEIKRI 124
GG+L I A + +SE A ++ + + H+ +++R P++ + ++K
Sbjct: 102 LVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLK-- 159
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL 184
VK+ADFGL E G F GTP +L+PEVL
Sbjct: 160 -----------------------GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 196
Query: 185 TETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+ Y + VD W GV+++ +LVG PF +D+ ++ I +P
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 244
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E +S + ++HP ++ L ++ +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ILKEIQHPNVITLHEVYENK 86
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V + E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 87 TDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTPEF+
Sbjct: 138 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFV 184
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 238 EAIA 241
A+A
Sbjct: 245 SALA 248
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 37/244 (15%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+++E R + ++HP ++ L ++ +
Sbjct: 33 KSTGLQYAAKFIKKRRTKSSRRGVSREDIE------REVSILKEIQHPNVITLHEVYENK 86
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E AGG+L + + +E A + ++ G+ YLH +I +
Sbjct: 87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH--------- 137
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+ + + L N + +KI DFGL + + FG+ GTP F+
Sbjct: 138 ------------FDLKPENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPAFV 184
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSL 237
APE++ D W +GV+ + +L G SPF GD ++E ++ VN E F +
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 238 EAIA 241
A+A
Sbjct: 245 SALA 248
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGD--IIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ 58
V L+ R T + AI+ + K I + E + L+ + E+ + HP ++ + F
Sbjct: 165 VKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 224
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
E + V+E GG+L + + E Y ++L +QYLHE+ II+R
Sbjct: 225 AEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR------ 277
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
++K EN ++S +E + +KI DFG K +G T CGTP
Sbjct: 278 --DLK------PENVLLSSQEE--------DCLIKITDFGHSK-ILGETSLMRTLCGTPT 320
Query: 178 FLAPEVLTE---TSYTRAVDWWGLGVLIFEMLVGESPF 212
+LAPEVL Y RAVD W LGV++F L G PF
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 29/225 (12%)
Query: 10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEY 69
G+ +A + + ARD + L E RI + ++HP +V L E H + +
Sbjct: 36 GQEYAAMIINTKKLSARDH-QKLEREARICRL---LKHPNIVRLHDSISEEGHHYLIFDL 91
Query: 70 AAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
GG+L I A + +SE A ++ + + H+ +++R N+ E +
Sbjct: 92 VTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHR---NLKPENL------- 141
Query: 129 QENYKVNSSQEIKLTVNDTEGY-VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET 187
L + +G VK+ADFGL E G F GTP +L+PEVL +
Sbjct: 142 -------------LLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD 188
Query: 188 SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
Y + VD W GV+++ +LVG PF +D+ ++ I +P
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP 233
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGD--IIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ 58
V L+ R T + AI+ + K I + E + L+ + E+ + HP ++ + F
Sbjct: 151 VKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
E + V+E GG+L + + E Y ++L +QYLHE+ II+R
Sbjct: 211 AEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR------ 263
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
++K EN ++S +E + +KI DFG K +G T CGTP
Sbjct: 264 --DLK------PENVLLSSQEE--------DCLIKITDFGHSK-ILGETSLMRTLCGTPT 306
Query: 178 FLAPEVLTE---TSYTRAVDWWGLGVLIFEMLVGESPF 212
+LAPEVL Y RAVD W LGV++F L G PF
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 46 RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHE 105
++P +VN + + VMEY AGG L + E + + L++LH
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS 135
Query: 106 SRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGF 165
+++I+R NI + I + +G VK+ DFG C +
Sbjct: 136 NQVIHR---NIKSDNI----------------------LLGMDGSVKLTDFGFCAQITPE 170
Query: 166 GDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+ T GTP ++APEV+T +Y VD W LG++ EM+ GE P+
Sbjct: 171 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 41/246 (16%)
Query: 4 SQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHV 63
+Q + ++ + + LKK D+ R E E +RHP ++ L+ T +
Sbjct: 33 TQQKVALKFISRQLLKKSDMHMRVERE--------ISYLKLLRHPHIIKLYDVITTPTDI 84
Query: 64 CFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIK 122
V+EYA GG+L +I +E + ++ ++Y H +I++R ++K
Sbjct: 85 VMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHR--------DLK 135
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE 182
+ +N V KIADFGL M G+ T CG+P + APE
Sbjct: 136 PENLLLDDNLNV-----------------KIADFGLSN-IMTDGNFLKTSCGSPNYAAPE 177
Query: 183 VLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDE--EEVFDSIVNDEVRYPRFLSLEA 239
V+ Y VD W G++++ MLVG PF DDE +F + + P FLS A
Sbjct: 178 VINGKLYAGPEVDVWSCGIVLYVMLVGRLPF--DDEFIPNLFKKVNSCVYVMPDFLSPGA 235
Query: 240 IAIMRR 245
+++RR
Sbjct: 236 QSLIRR 241
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 13 FAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAG 72
+A K + + ARD + L E RI + ++HP +V L E V + G
Sbjct: 59 YAAKIINTKKLSARDH-QKLEREARICRL---LKHPNIVRLHDSISEEGFHYLVFDLVTG 114
Query: 73 GDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
G+L I A + +SE A ++ + ++H+ I++R ++ E +
Sbjct: 115 GELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHR---DLKPENL---------- 161
Query: 132 YKVNSSQEIKLTVNDTEGY-VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYT 190
L + +G VK+ADFGL E G F GTP +L+PEVL + Y
Sbjct: 162 ----------LLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYG 211
Query: 191 RAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+ VD W GV+++ +LVG PF +D+ +++ I +P
Sbjct: 212 KPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFP 253
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 25/167 (14%)
Query: 46 RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHE 105
++P +VN + + VMEY AGG L + E + + L++LH
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS 134
Query: 106 SRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGF 165
+++I+R +IK S I L + +G VK+ DFG C +
Sbjct: 135 NQVIHR--------DIK--------------SDNILLGM---DGSVKLTDFGFCAQITPE 169
Query: 166 GDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+ T GTP ++APEV+T +Y VD W LG++ EM+ GE P+
Sbjct: 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 10 GEYFAIKALKKG-DIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVME 68
G+ A+KA + D +E++ E ++F + ++HP ++ L E ++C VME
Sbjct: 30 GDEVAVKAARHDPDEDISQTIENVRQEAKLFAM---LKHPNIIALRGVCLKEPNLCLVME 86
Query: 69 YAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
+A GG L + V +A + G+ YLH+ I+ ++ I ++ KV
Sbjct: 87 FARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQ-KV 145
Query: 129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF--CGTPEFLAPEVLTE 186
+ N +KI DFGL +E RT G ++APEV+
Sbjct: 146 ENGDLSNK-------------ILKITDFGLAREW----HRTTKMSAAGAYAWMAPEVIRA 188
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+ +++ D W GVL++E+L GE PF G D V + +++ P
Sbjct: 189 SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP 234
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 28/225 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L + + TG AIK +KK + +LL E V + HP ++ L+ F+ +
Sbjct: 37 VLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDE---VAVLKQLDHPNIMKLYEFFEDK 93
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ VME GG+L I FSE A V+ G YLH+ I++R K
Sbjct: 94 RNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRD----LKP 149
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
E +E+K ++ +KI DFGL G + GT ++
Sbjct: 150 ENLLLESKSRD------------------ALIKIVDFGLSAH-FEVGGKMKERLGTAYYI 190
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
APEVL + Y D W GV+++ +L G PF G ++E+ +
Sbjct: 191 APEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 28/225 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+L + + TG AIK +KK + +LL E V + HP ++ L+ F+ +
Sbjct: 20 VLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDE---VAVLKQLDHPNIMKLYEFFEDK 76
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ VME GG+L I FSE A V+ G YLH+ I++R K
Sbjct: 77 RNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRD----LKP 132
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
E +E+K ++ +KI DFGL G + GT ++
Sbjct: 133 ENLLLESKSRD------------------ALIKIVDFGLSAH-FEVGGKMKERLGTAYYI 173
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
APEVL + Y D W GV+++ +L G PF G ++E+ +
Sbjct: 174 APEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 106/247 (42%), Gaps = 35/247 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V + +++ TG A+K L + I + D V + KR + RHP ++ L+ T
Sbjct: 27 VKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI---KREIQNLKLFRHPHIIKLYQVISTP 83
Query: 61 AHVCFVMEYAAGGDLMMHI--HADVFS-EPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
VMEY +GG+L +I H V E R +F ++ + Y H +++R ++
Sbjct: 84 TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ--ILSAVDYCHRHMVVHR---DLK 138
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
E + + D KIADFGL M G+ T CG+P
Sbjct: 139 PENV----------------------LLDAHMNAKIADFGLSNM-MSDGEFLRTSCGSPN 175
Query: 178 FLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
+ APEV++ Y VD W GV+++ +L G PF + +F I P +L+
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLN 235
Query: 237 LEAIAIM 243
++
Sbjct: 236 RSVATLL 242
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 102/233 (43%), Gaps = 31/233 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ + + A+K L K I ++ VE L +R E+ + HP ++ L+ F
Sbjct: 39 VYLAREKKSHFIVALKVLFKSQI-EKEGVEHQL--RREIEIQAHLHHPNILRLYNYFYDR 95
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ ++EYA G+L + F E R + L Y H ++I+R
Sbjct: 96 RRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHR-------- 147
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+IK EN + E +KIADFG R T CGT ++L
Sbjct: 148 DIK------PENLLLGLKGE-----------LKIADFGWSVHAPSL--RRKTMCGTLDYL 188
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
PE++ + VD W +GVL +E+LVG PF E + IV ++++P
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFP 241
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 41/229 (17%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK + R+E+E +S + + HP ++ L ++
Sbjct: 34 KSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS------ILRQVLHPNIITLHDVYENR 87
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E +GG+L + + SE A + ++ G+ YLH +I +
Sbjct: 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH--------- 138
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE---GMGFGDRTGTFCGTP 176
+ + + L N ++K+ DFGL E G+ F + GTP
Sbjct: 139 ------------FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN----IFGTP 182
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
EF+APE++ D W +GV+ + +L G SPF GD ++E +I
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 91/223 (40%), Gaps = 34/223 (15%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
++ T +A+K + K +E+E LL +HP ++ L + HV
Sbjct: 48 HKATNMEYAVKVIDKSKRDPSEEIEILL---------RYGQHPNIITLKDVYDDGKHVYL 98
Query: 66 VMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
V E GG+L+ I FSE A F + ++YLH +++R
Sbjct: 99 VTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHR------------- 145
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL 184
+ S + + + ++I DFG K+ T C T F+APEVL
Sbjct: 146 --------DLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 185 TETSYTRAVDWWGLGVLIFEMLVGESPF---PGDDEEEVFDSI 224
Y D W LG+L++ ML G +PF P D EE+ I
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 31/212 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V ++ ++TG+ A+K K D+ + E L +E I H +V++++ +
Sbjct: 61 VCIATEKHTGKQVAVK---KMDLRKQQRRELLFNEVVIM---RDYHHDNVVDMYSSYLVG 114
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ VME+ GG L + +E + V+ L YLH +I+R +
Sbjct: 115 DELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHR--------D 166
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
IK S I LT ++G +K++DFG C + + GTP ++A
Sbjct: 167 IK--------------SDSILLT---SDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMA 209
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
PEV++ Y VD W LG+++ EM+ GE P+
Sbjct: 210 PEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 92/226 (40%), Gaps = 40/226 (17%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
++ T +A+K + K +E+E LL +HP ++ L + HV
Sbjct: 48 HKATNMEYAVKVIDKSKRDPSEEIEILL---------RYGQHPNIITLKDVYDDGKHVYL 98
Query: 66 VMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYR---PQSNITKEEI 121
V E GG+L+ I FSE A F + ++YLH +++R P + + +E
Sbjct: 99 VTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDES 158
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAP 181
E ++I DFG K+ T C T F+AP
Sbjct: 159 GNPEC------------------------LRICDFGFAKQLRAENGLLMTPCYTANFVAP 194
Query: 182 EVLTETSYTRAVDWWGLGVLIFEMLVGESPF---PGDDEEEVFDSI 224
EVL Y D W LG+L++ ML G +PF P D EE+ I
Sbjct: 195 EVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 98/240 (40%), Gaps = 56/240 (23%)
Query: 1 VILSQYRNTGEYFAIKALKK-----------------------GDIIARDEVESLLSEKR 37
V L+ N Y+A+K L K G I R +E + E
Sbjct: 29 VKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIA 88
Query: 38 IFEVANTMRHPFLVNLFACFQ--TEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAAC 95
I + + HP +V L E H+ V E G +M SE +A FY
Sbjct: 89 ILK---KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQD 145
Query: 96 VVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD 155
++ G++YLH +II+R +IK V E +G++KIAD
Sbjct: 146 LIKGIEYLHYQKIIHR--------DIKPSNLLVGE-----------------DGHIKIAD 180
Query: 156 FGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYT---RAVDWWGLGVLIFEMLVGESPF 212
FG+ E G GTP F+APE L+ET +A+D W +GV ++ + G+ PF
Sbjct: 181 FGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
Query: 46 RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHE 105
++P +VN + + VMEY AGG L + E + + L++LH
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS 134
Query: 106 SRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGF 165
+++I+R +IK S I L + +G VK+ DFG C +
Sbjct: 135 NQVIHR--------DIK--------------SDNILLGM---DGSVKLTDFGFCAQITPE 169
Query: 166 GDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+ GTP ++APEV+T +Y VD W LG++ EM+ GE P+
Sbjct: 170 QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
Query: 46 RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHE 105
++P +VN + + VMEY AGG L + E + + L++LH
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS 135
Query: 106 SRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGF 165
+++I+R +IK S I L + +G VK+ DFG C +
Sbjct: 136 NQVIHR--------DIK--------------SDNILLGM---DGSVKLTDFGFCAQITPE 170
Query: 166 GDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+ GTP ++APEV+T +Y VD W LG++ EM+ GE P+
Sbjct: 171 QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 29/226 (12%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVME 68
TG +A K + + ARD + L E RI + ++H +V L E V +
Sbjct: 28 TGHEYAAKIINTKKLSARDH-QKLEREARICRL---LKHSNIVRLHDSISEEGFHYLVFD 83
Query: 69 YAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAK 127
GG+L I A + +SE A ++ + + H+ +++R ++ E +
Sbjct: 84 LVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHR---DLKPENL------ 134
Query: 128 VQENYKVNSSQEIKLTVNDTEGY-VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE 186
L + +G VK+ADFGL E G F GTP +L+PEVL +
Sbjct: 135 --------------LLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+Y + VD W GV+++ +LVG PF +D+ +++ I +P
Sbjct: 181 EAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFP 226
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
Query: 46 RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHE 105
++P +VN + + VMEY AGG L + E + + L++LH
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS 134
Query: 106 SRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGF 165
+++I+R +IK S I L + +G VK+ DFG C +
Sbjct: 135 NQVIHR--------DIK--------------SDNILLGM---DGSVKLTDFGFCAQITPE 169
Query: 166 GDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+ GTP ++APEV+T +Y VD W LG++ EM+ GE P+
Sbjct: 170 QSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 28/225 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG+ A+K + K + + + ESLL E ++ + + HP ++ L+ F+ +
Sbjct: 42 VILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK---QLDHPNIMKLYEFFEDK 98
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ V E GG+L I FSE A V+ G+ Y+H+++I++R K
Sbjct: 99 GYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD----LKP 154
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
E +E+K ++ ++I DFGL + GT ++
Sbjct: 155 ENLLLESKSKD------------------ANIRIIDFGLSTH-FEASKKMKDKIGTAYYI 195
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
APEVL T Y D W GV+++ +L G PF G +E ++ +
Sbjct: 196 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 28/225 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG+ A+K + K + + + ESLL E ++ + HP ++ L+ F+ +
Sbjct: 48 VILCKDKITGQECAVKVISKRQVKQKTDKESLLRE---VQLLKQLDHPNIMKLYEFFEDK 104
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ V E GG+L I FSE A V+ G+ Y+H+++I++R K
Sbjct: 105 GYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD----LKP 160
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
E +E+K ++ ++I DFGL + GT ++
Sbjct: 161 ENLLLESKSKD------------------ANIRIIDFGLSTH-FEASKKMKDKIGTAYYI 201
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
APEVL T Y D W GV+++ +L G PF G +E ++ +
Sbjct: 202 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 245
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
IL + G + IK + + +++ ES +R V M+HP +V F+
Sbjct: 40 AILVKSTEDGRQYVIKEINISRMSSKEREES----RREVAVLANMKHPNIVQYRESFEEN 95
Query: 61 AHVCFVMEYAAGGDLMMHIHAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+ VM+Y GGDL I+A +F E + + + + L L+++H+ +I++R
Sbjct: 96 GSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHR------ 149
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
+IK SQ I LT +G V++ DFG+ + + GTP
Sbjct: 150 --DIK--------------SQNIFLT---KDGTVQLGDFGIARVLNSTVELARACIGTPY 190
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+L+PE+ Y D W LG +++E+ + F
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF 225
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 35/247 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V + +++ TG A+K L + I + D V + KR + RHP ++ L+ T
Sbjct: 27 VKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI---KREIQNLKLFRHPHIIKLYQVISTP 83
Query: 61 AHVCFVMEYAAGGDLMMHI--HADVFS-EPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
VMEY +GG+L +I H V E R +F ++ + Y H +++R ++
Sbjct: 84 TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ--ILSAVDYCHRHMVVHR---DLK 138
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
E + + D KIADFGL M G+ CG+P
Sbjct: 139 PENV----------------------LLDAHMNAKIADFGLSNM-MSDGEFLRDSCGSPN 175
Query: 178 FLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS 236
+ APEV++ Y VD W GV+++ +L G PF + +F I P +L+
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLN 235
Query: 237 LEAIAIM 243
++
Sbjct: 236 RSVATLL 242
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 28/225 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG+ A+K + K + + + ESLL E ++ + + HP ++ L+ F+ +
Sbjct: 65 VILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK---QLDHPNIMKLYEFFEDK 121
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ V E GG+L I FSE A V+ G+ Y+H+++I++R K
Sbjct: 122 GYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD----LKP 177
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
E +E+K ++ ++I DFGL + GT ++
Sbjct: 178 ENLLLESKSKD------------------ANIRIIDFGLSTH-FEASKKMKDKIGTAYYI 218
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
APEVL T Y D W GV+++ +L G PF G +E ++ +
Sbjct: 219 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 262
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 28/225 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG+ A+K + K + + + ESLL E ++ + + HP ++ L+ F+ +
Sbjct: 66 VILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK---QLDHPNIMKLYEFFEDK 122
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ V E GG+L I FSE A V+ G+ Y+H+++I++R K
Sbjct: 123 GYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD----LKP 178
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
E +E+K ++ ++I DFGL + GT ++
Sbjct: 179 ENLLLESKSKD------------------ANIRIIDFGLSTH-FEASKKMKDKIGTAYYI 219
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
APEVL T Y D W GV+++ +L G PF G +E ++ +
Sbjct: 220 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 263
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 36 KRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVF--SEPRAVFYA 93
K + N + HP L+NL F+ + + ++E+ +GG+L I A+ + SE + Y
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM 155
Query: 94 ACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKI 153
GL+++HE I++ +I E I + E K +S VKI
Sbjct: 156 RQACEGLKHMHEHSIVHL---DIKPENI------MCETKKASS--------------VKI 192
Query: 154 ADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFP 213
DFGL + + + T EF APE++ D W +GVL + +L G SPF
Sbjct: 193 IDFGLATK-LNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA 251
Query: 214 GDDEEEVFDSI 224
G+D+ E ++
Sbjct: 252 GEDDLETLQNV 262
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L++ +++G A+K + D+ + E L +E I +H +V ++ +
Sbjct: 61 VCLAREKHSGRQVAVKMM---DLRKQQRRELLFNEVVIM---RDYQHFNVVEMYKSYLVG 114
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +ME+ GG L + +E + V+ L YLH +I+R +
Sbjct: 115 EELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHR--------D 166
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
IK S I LT++ G VK++DFG C + + GTP ++A
Sbjct: 167 IK--------------SDSILLTLD---GRVKLSDFGFCAQISKDVPKRKXLVGTPYWMA 209
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD 215
PEV++ + Y VD W LG+++ EM+ GE P+ D
Sbjct: 210 PEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD 244
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 43/245 (17%)
Query: 9 TGEYFAIKALKK---GDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
TGE AIK + K G + R + E E +RH + L+ +T +
Sbjct: 34 TGEMVAIKIMDKNTLGSDLPRIKTE--------IEALKNLRHQHICQLYHVLETANKIFM 85
Query: 66 VMEYAAGGDLMMHI-HADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIK 122
V+EY GG+L +I D SE R VF +V + Y+H +R ++K
Sbjct: 86 VLEYCPGGELFDYIISQDRLSEEETRVVFRQ--IVSAVAYVHSQGYAHR--------DLK 135
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-RTGTFCGTPEFLAP 181
E +K+ K+ DFGLC + G D T CG+ + AP
Sbjct: 136 PENLLFDEYHKL-----------------KLIDFGLCAKPKGNKDYHLQTCCGSLAYAAP 178
Query: 182 EVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAI 240
E++ SY + D W +G+L++ ++ G PF D+ ++ I+ + P++LS +I
Sbjct: 179 ELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSI 238
Query: 241 AIMRR 245
++++
Sbjct: 239 LLLQQ 243
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 30/174 (17%)
Query: 45 MRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHAD----VFSEPRAVFYAACVVLGL 100
++H +V F + ME GG L + + +E FY ++ GL
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135
Query: 101 QYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK 160
+YLH+++I++R +I + + +N G +KI+DFG K
Sbjct: 136 KYLHDNQIVHR---DIKGDNV---------------------LINTYSGVLKISDFGTSK 171
Query: 161 EGMGFGDRTGTFCGTPEFLAPEVLTE--TSYTRAVDWWGLGVLIFEMLVGESPF 212
G T TF GT +++APE++ + Y +A D W LG I EM G+ PF
Sbjct: 172 RLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 41/230 (17%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+E+E +S + + H ++ L ++
Sbjct: 34 KSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS------ILRQVLHHNVITLHDVYENR 87
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E +GG+L + + SE A + ++ G+ YLH +I +
Sbjct: 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH--------- 138
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE---GMGFGDRTGTFCGTP 176
+ + + L N ++K+ DFGL E G+ F + GTP
Sbjct: 139 ------------FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN----IFGTP 182
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN 226
EF+APE++ D W +GV+ + +L G SPF GD ++E +I +
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS 232
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 93/226 (41%), Gaps = 40/226 (17%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
++ T FA+K + K +E+E LL + HP ++ L + +V
Sbjct: 43 HKATNMEFAVKIIDKSKRDPTEEIEILLRYGQ---------HPNIITLKDVYDDGKYVYV 93
Query: 66 VMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYR---PQSNITKEEI 121
V E GG+L+ I FSE A + ++YLH +++R P + + +E
Sbjct: 94 VTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES 153
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAP 181
E+ ++I DFG K+ T C T F+AP
Sbjct: 154 GNPES------------------------IRICDFGFAKQLRAENGLLMTPCYTANFVAP 189
Query: 182 EVLTETSYTRAVDWWGLGVLIFEMLVGESPF---PGDDEEEVFDSI 224
EVL Y A D W LGVL++ ML G +PF P D EE+ I
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI 235
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 41/229 (17%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+E+E +S + + H ++ L ++
Sbjct: 34 KSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS------ILRQVLHHNVITLHDVYENR 87
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E +GG+L + + SE A + ++ G+ YLH +I +
Sbjct: 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH--------- 138
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE---GMGFGDRTGTFCGTP 176
+ + + L N ++K+ DFGL E G+ F + GTP
Sbjct: 139 ------------FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN----IFGTP 182
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
EF+APE++ D W +GV+ + +L G SPF GD ++E +I
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 41/230 (17%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+E+E +S + + H ++ L ++
Sbjct: 34 KSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS------ILRQVLHHNVITLHDVYENR 87
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E +GG+L + + SE A + ++ G+ YLH +I +
Sbjct: 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH--------- 138
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE---GMGFGDRTGTFCGTP 176
+ + + L N ++K+ DFGL E G+ F + GTP
Sbjct: 139 ------------FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN----IFGTP 182
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN 226
EF+APE++ D W +GV+ + +L G SPF GD ++E +I +
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS 232
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
VIL + + TG+ A+K + K + + + ESLL E ++ + + HP + L+ F+ +
Sbjct: 42 VILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK---QLDHPNIXKLYEFFEDK 98
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ V E GG+L I FSE A V+ G+ Y H+++I++R K
Sbjct: 99 GYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRD----LKP 154
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
E +E+K ++ ++I DFGL + GT ++
Sbjct: 155 ENLLLESKSKD------------------ANIRIIDFGLSTH-FEASKKXKDKIGTAYYI 195
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
APEVL T Y D W GV+++ +L G PF G +E ++ +
Sbjct: 196 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 41/230 (17%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+E+E +S + + H ++ L ++
Sbjct: 34 KSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS------ILRQVLHHNVITLHDVYENR 87
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E +GG+L + + SE A + ++ G+ YLH +I +
Sbjct: 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH--------- 138
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE---GMGFGDRTGTFCGTP 176
+ + + L N ++K+ DFGL E G+ F + GTP
Sbjct: 139 ------------FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN----IFGTP 182
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN 226
EF+APE++ D W +GV+ + +L G SPF GD ++E +I +
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS 232
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 30/174 (17%)
Query: 45 MRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVF----SEPRAVFYAACVVLGL 100
++H +V F + ME GG L + + +E FY ++ GL
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 121
Query: 101 QYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK 160
+YLH+++I++R +I + + +N G +KI+DFG K
Sbjct: 122 KYLHDNQIVHR---DIKGDNV---------------------LINTYSGVLKISDFGTSK 157
Query: 161 EGMGFGDRTGTFCGTPEFLAPEVLTE--TSYTRAVDWWGLGVLIFEMLVGESPF 212
G T TF GT +++APE++ + Y +A D W LG I EM G+ PF
Sbjct: 158 RLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 37/224 (16%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
++ + + FA+K + K R E + +K I + HP +V L F + H
Sbjct: 32 HKKSNQAFAVKIISK-----RMEANT---QKEITALKLCEGHPNIVKLHEVFHDQLHTFL 83
Query: 66 VMEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYR---PQSNITKEEI 121
VME GG+L I FSE A + +V + ++H+ +++R P++ + +E
Sbjct: 84 VMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN 143
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAP 181
+E +KI DFG + T C T + AP
Sbjct: 144 DNLE-------------------------IKIIDFGFARLKPPDNQPLKTPCFTLHYAAP 178
Query: 182 EVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
E+L + Y + D W LGV+++ ML G+ PF D S V
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV 222
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 49/265 (18%)
Query: 14 AIKALKKGDI--IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAA 71
AIK + K I I +VE + +E R+ + + HP + L+ ++ E ++C VME
Sbjct: 55 AIKIMNKNKIRQINPKDVERIKTEVRLMK---KLHHPNIARLYEVYEDEQYICLVMELCH 111
Query: 72 GGDLMMHIHADVFSEPRAVFYAACVVL-----------------------GLQYLHESRI 108
GG L+ + +VF + A VV L ++ ++
Sbjct: 112 GGHLLDKL--NVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKL 169
Query: 109 IYRPQSNITKEEIKRIEAKVQENYKVNSSQEIK----LTVNDTEGYVKIADFGLCKE--G 162
I SNI ++ + + ++IK L + +K+ DFGL KE
Sbjct: 170 I----SNIMRQIFSALHYLHNQGI---CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYK 222
Query: 163 MGFGDRTG--TFCGTPEFLAPEVLTET--SYTRAVDWWGLGVLIFEMLVGESPFPGDDEE 218
+ G+ G T GTP F+APEVL T SY D W GVL+ +L+G PFPG ++
Sbjct: 223 LNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA 282
Query: 219 EVFDSIVNDEVRY--PRFLSLEAIA 241
+ ++N ++ + P + L +A
Sbjct: 283 DTISQVLNKKLCFENPNYNVLSPLA 307
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 41/229 (17%)
Query: 7 RNTGEYFAIKALKKGDI------IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
++TG +A K +KK ++R+E+E +S + + H ++ L ++
Sbjct: 34 KSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS------ILRQVLHHNVITLHDVYENR 87
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
V ++E +GG+L + + SE A + ++ G+ YLH +I +
Sbjct: 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH--------- 138
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE---GMGFGDRTGTFCGTP 176
+ + + L N ++K+ DFGL E G+ F + GTP
Sbjct: 139 ------------FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN----IFGTP 182
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
EF+APE++ D W +GV+ + +L G SPF GD ++E +I
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V ++ R++G+ A+K K D+ + E L +E I +H +V ++ +
Sbjct: 45 VCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMR---DYQHENVVEMYNSYLVG 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ VME+ GG L + +E + V+ L LH +I+R +
Sbjct: 99 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
IK S I LT +G VK++DFG C + R GTP ++A
Sbjct: 151 IK--------------SDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 193
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
PE+++ Y VD W LG+++ EM+ GE P+
Sbjct: 194 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 92/226 (40%), Gaps = 40/226 (17%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
++ T FA+K + K +E+E LL +HP ++ L + +V
Sbjct: 43 HKATNXEFAVKIIDKSKRDPTEEIEILL---------RYGQHPNIITLKDVYDDGKYVYV 93
Query: 66 VMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYR---PQSNITKEEI 121
V E GG+L+ I FSE A + ++YLH +++R P + + +E
Sbjct: 94 VTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES 153
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAP 181
E+ ++I DFG K+ T C T F+AP
Sbjct: 154 GNPES------------------------IRICDFGFAKQLRAENGLLXTPCYTANFVAP 189
Query: 182 EVLTETSYTRAVDWWGLGVLIFEMLVGESPF---PGDDEEEVFDSI 224
EVL Y A D W LGVL++ L G +PF P D EE+ I
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARI 235
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V ++ R++G+ A+K K D+ + E L +E I +H +V ++ +
Sbjct: 47 VCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMR---DYQHENVVEMYNSYLVG 100
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ VME+ GG L + +E + V+ L LH +I+R +
Sbjct: 101 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR--------D 152
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
IK S I LT +G VK++DFG C + R GTP ++A
Sbjct: 153 IK--------------SDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 195
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
PE+++ Y VD W LG+++ EM+ GE P+
Sbjct: 196 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V ++ R++G+ A+K K D+ + E L +E I +H +V ++ +
Sbjct: 36 VCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMR---DYQHENVVEMYNSYLVG 89
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ VME+ GG L + +E + V+ L LH +I+R +
Sbjct: 90 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR--------D 141
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
IK S I LT +G VK++DFG C + R GTP ++A
Sbjct: 142 IK--------------SDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 184
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
PE+++ Y VD W LG+++ EM+ GE P+
Sbjct: 185 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V ++ R++G+ A+K K D+ + E L +E I +H +V ++ +
Sbjct: 40 VCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMR---DYQHENVVEMYNSYLVG 93
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ VME+ GG L + +E + V+ L LH +I+R +
Sbjct: 94 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR--------D 145
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
IK S I LT +G VK++DFG C + R GTP ++A
Sbjct: 146 IK--------------SDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 188
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
PE+++ Y VD W LG+++ EM+ GE P+
Sbjct: 189 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V ++ R++G+ A+K K D+ + E L +E I +H +V ++ +
Sbjct: 90 VCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMR---DYQHENVVEMYNSYLVG 143
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ VME+ GG L + +E + V+ L LH +I+R +
Sbjct: 144 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR--------D 195
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
IK S I LT +G VK++DFG C + R GTP ++A
Sbjct: 196 IK--------------SDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 238
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
PE+++ Y VD W LG+++ EM+ GE P+
Sbjct: 239 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V ++ R++G+ A+K K D+ + E L +E I +H +V ++ +
Sbjct: 167 VCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMR---DYQHENVVEMYNSYLVG 220
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ VME+ GG L + +E + V+ L LH +I+R +
Sbjct: 221 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR--------D 272
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
IK S I LT +G VK++DFG C + R GTP ++A
Sbjct: 273 IK--------------SDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 315
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
PE+++ Y VD W LG+++ EM+ GE P+
Sbjct: 316 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 5 QYRNTGEYFAIKALKK--GDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH 62
+ + T + +A+K LKK I R E+ LL + HP ++ L F+T
Sbjct: 73 KQKGTQKPYALKVLKKTVDKKIVRTEIGVLLR----------LSHPNIIKLKEIFETPTE 122
Query: 63 VCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEI 121
+ V+E GG+L I +SE A ++ + YLHE+ I++R ++
Sbjct: 123 ISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHR--------DL 174
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAP 181
K + + + +KIADFGL K + T CGTP + AP
Sbjct: 175 K--------------PENLLYATPAPDAPLKIADFGLSKI-VEHQVLMKTVCGTPGYCAP 219
Query: 182 EVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE-VFDSIVNDE 228
E+L +Y VD W +G++ + +L G PF + ++ +F I+N E
Sbjct: 220 EILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE 267
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 32/220 (14%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
R TG FA K ++ E + K I + + +RHP LVNL F+ + + +
Sbjct: 73 RATGNNFAAKF-----VMTPHESDKETVRKEI-QTMSVLRHPTLVNLHDAFEDDNEMVMI 126
Query: 67 MEYAAGGDLMMHI--HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
E+ +GG+L + + SE AV Y V GL ++HE+ ++ ++ E I
Sbjct: 127 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHL---DLKPENIM-- 181
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL 184
+ S E+KL DFGL + GT EF APEV
Sbjct: 182 -------FTTKRSNELKLI-----------DFGLTAH-LDPKQSVKVTTGTAEFAAPEVA 222
Query: 185 TETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
D W +GVL + +L G SPF G++++E ++
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 262
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 25/164 (15%)
Query: 48 PFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESR 107
P++ + + + + +MEY GG + + E + ++ GL YLH +
Sbjct: 85 PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 108 IIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD 167
I+R +IK + E+ G VK+ADFG+ +
Sbjct: 145 KIHR--------DIKAANVLLSEH-----------------GEVKLADFGVAGQLTDTQI 179
Query: 168 RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESP 211
+ TF GTP ++APEV+ +++Y D W LG+ E+ GE P
Sbjct: 180 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 25/164 (15%)
Query: 48 PFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESR 107
P++ + + + + +MEY GG + + E + ++ GL YLH +
Sbjct: 65 PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 108 IIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD 167
I+R +IK + E+ G VK+ADFG+ +
Sbjct: 125 KIHR--------DIKAANVLLSEH-----------------GEVKLADFGVAGQLTDTQI 159
Query: 168 RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESP 211
+ TF GTP ++APEV+ +++Y D W LG+ E+ GE P
Sbjct: 160 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 32/220 (14%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
R TG FA K ++ E + K I + + +RHP LVNL F+ + + +
Sbjct: 179 RATGNNFAAKF-----VMTPHESDKETVRKEI-QTMSVLRHPTLVNLHDAFEDDNEMVMI 232
Query: 67 MEYAAGGDLMMHI--HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
E+ +GG+L + + SE AV Y V GL ++HE+ ++ ++ E I
Sbjct: 233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHL---DLKPENIM-- 287
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL 184
+ S E+KL DFGL + GT EF APEV
Sbjct: 288 -------FTTKRSNELKLI-----------DFGLTAH-LDPKQSVKVTTGTAEFAAPEVA 328
Query: 185 TETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
D W +GVL + +L G SPF G++++E ++
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 368
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 49 FLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRI 108
++ + + + + +MEY GG + + A F E + ++ GL YLH +
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 109 IYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDR 168
I+R +IK + E +G VK+ADFG+ + +
Sbjct: 142 IHR--------DIKAANVLLSE-----------------QGDVKLADFGVAGQLTDTQIK 176
Query: 169 TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESP 211
TF GTP ++APEV+ +++Y D W LG+ E+ GE P
Sbjct: 177 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 36/219 (16%)
Query: 36 KRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVF--SEPRAVFYA 93
K+ + N RH +++L F++ + + E+ +G D+ I+ F +E V Y
Sbjct: 49 KKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYV 108
Query: 94 ACVVLGLQYLHESRIIY---RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY 150
V LQ+LH I + RP++ I Y+ S IK
Sbjct: 109 HQVCEALQFLHSHNIGHFDIRPENII---------------YQTRRSSTIK--------- 144
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
I +FG ++ + GD PE+ APEV + A D W LG L++ +L G +
Sbjct: 145 --IIEFGQARQ-LKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN 201
Query: 211 PFPGDDEEEVFDSIVNDEVRYP----RFLSLEAIAIMRR 245
PF + +++ ++I+N E + + +S+EA+ + R
Sbjct: 202 PFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 33/208 (15%)
Query: 23 IIARDEVESLLSEKRIFEVA--NTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI- 79
II + V + + K + EVA + HP ++ L+ F+ + + VME GG+L I
Sbjct: 69 IIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEII 128
Query: 80 HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE 139
H F+E A V+ G+ YLH+ I++R K E +E+K
Sbjct: 129 HRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRD----LKPENLLLESK------------ 172
Query: 140 IKLTVNDTEGYVKIADFGLC---KEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWW 196
+ + +KI DFGL + +R GT ++APEVL + Y D W
Sbjct: 173 ------EKDALIKIVDFGLSAVFENQKKMKER----LGTAYYIAPEVLRK-KYDEKCDVW 221
Query: 197 GLGVLIFEMLVGESPFPGDDEEEVFDSI 224
+GV++F +L G PF G ++E+ +
Sbjct: 222 SIGVILFILLAGYPPFGGQTDQEILRKV 249
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 35/209 (16%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
++ TG+ AIK + +++ ++ E I + ++ P +V + + +
Sbjct: 50 HKETGQIVAIK-----QVPVESDLQEIIKEISIMQQCDS---PHVVKYYGSYFKNTDLWI 101
Query: 66 VMEYAAGGDL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
VMEY G + ++ + +E + GL+YLH R I+R +IK
Sbjct: 102 VMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHR--------DIK- 152
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
N +N TEG+ K+ADFG+ + + GTP ++APEV
Sbjct: 153 -----AGNILLN-----------TEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEV 196
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+ E Y D W LG+ EM G+ P+
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 48 PFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESR 107
P++ + + + + +MEY GG + + E + ++ GL YLH +
Sbjct: 80 PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 108 IIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD 167
I+R +IK + E+ G VK+ADFG+ +
Sbjct: 140 KIHR--------DIKAANVLLSEH-----------------GEVKLADFGVAGQLTDTQI 174
Query: 168 RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESP 211
+ F GTP ++APEV+ +++Y D W LG+ E+ GE P
Sbjct: 175 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 48 PFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESR 107
P++ + + + + +MEY GG + + E + ++ GL YLH +
Sbjct: 65 PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 108 IIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD 167
I+R +IK + E+ G VK+ADFG+ +
Sbjct: 125 KIHR--------DIKAANVLLSEH-----------------GEVKLADFGVAGQLTDTQI 159
Query: 168 RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESP 211
+ F GTP ++APEV+ +++Y D W LG+ E+ GE P
Sbjct: 160 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 38/215 (17%)
Query: 4 SQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHV 63
++ + TG A+ A K + + +E+E + E E+ T HP++V L + + +
Sbjct: 38 AKNKETG---ALAAAKVIETKSEEELEDYIVE---IEILATCDHPYIVKLLGAYYHDGKL 91
Query: 64 CFVMEYAAGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEI 121
++E+ GG D +M +EP+ ++ L +LH RII+R
Sbjct: 92 WIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHR---------- 141
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAP 181
+ K + + +T+ EG +++ADFG+ + + + +F GTP ++AP
Sbjct: 142 ---------DLKAGN---VLMTL---EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 186
Query: 182 EV-----LTETSYTRAVDWWGLGVLIFEMLVGESP 211
EV + +T Y D W LG+ + EM E P
Sbjct: 187 EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 38/215 (17%)
Query: 4 SQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHV 63
++ + TG A+ A K + + +E+E + E E+ T HP++V L + + +
Sbjct: 30 AKNKETG---ALAAAKVIETKSEEELEDYIVE---IEILATCDHPYIVKLLGAYYHDGKL 83
Query: 64 CFVMEYAAGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEI 121
++E+ GG D +M +EP+ ++ L +LH RII+R ++
Sbjct: 84 WIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHR--------DL 135
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAP 181
K + + +T+ EG +++ADFG+ + + + +F GTP ++AP
Sbjct: 136 K--------------AGNVLMTL---EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 178
Query: 182 EV-----LTETSYTRAVDWWGLGVLIFEMLVGESP 211
EV + +T Y D W LG+ + EM E P
Sbjct: 179 EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 25/164 (15%)
Query: 48 PFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESR 107
P++ F + + +MEY GG + + E ++ GL YLH R
Sbjct: 77 PYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSER 136
Query: 108 IIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD 167
I+R +IK + E +G VK+ADFG+ +
Sbjct: 137 KIHR--------DIKAANVLLSE-----------------QGDVKLADFGVAGQLTDTQI 171
Query: 168 RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESP 211
+ F GTP ++APEV+ +++Y D W LG+ E+ GE P
Sbjct: 172 KRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 35/228 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+ + R T + +A+K + K +D ++L E E+ + HP ++ LF +
Sbjct: 38 VLKCKDRITQQEYAVKVINKASAKNKD-TSTILRE---VELLKKLDHPNIMKLFEILEDS 93
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ V E GG+L I FSE A V G+ Y+H+ I++R
Sbjct: 94 SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHR-------- 145
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC---KEGMGFGDRTGTFCGTP 176
++K + I L + + +KI DFGL ++ DR GT
Sbjct: 146 DLK--------------PENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR----IGTA 187
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
++APEVL T Y D W GV+++ +L G PF G +E ++ +
Sbjct: 188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 33/220 (15%)
Query: 8 NTGEYFAIKALKKGDIIARD----EVESLLSEK--RIFEVANTMRHPFLVNLFACFQTEA 61
N G F + G ++AR E++ + + R +V + P++V + F ++
Sbjct: 18 NGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 77
Query: 62 HVCFVMEYAAGGDLMMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ ME+ GG L + A E + V+ GL YL E + I +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE-------KHKIMHRD 130
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VNS EIKL DFG+ G +F GT +++
Sbjct: 131 VK------PSNILVNSRGEIKL-----------CDFGV--SGQLIDSMANSFVGTRSYMS 171
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEV 220
PE L T Y+ D W +G+ + EM VG P P D +E+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 33/220 (15%)
Query: 8 NTGEYFAIKALKKGDIIARD----EVESLLSEK--RIFEVANTMRHPFLVNLFACFQTEA 61
N G F + G ++AR E++ + + R +V + P++V + F ++
Sbjct: 18 NGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 77
Query: 62 HVCFVMEYAAGGDLMMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ ME+ GG L + A E + V+ GL YL E + I +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE-------KHKIMHRD 130
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VNS EIKL DFG+ G +F GT +++
Sbjct: 131 VK------PSNILVNSRGEIKL-----------CDFGV--SGQLIDSMANSFVGTRSYMS 171
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEV 220
PE L T Y+ D W +G+ + EM VG P P D +E+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 38/235 (16%)
Query: 1 VILSQYRNTGEYFAIKALKKGDI-IARDEVESLLSEKRIFEVAN------TMRHPFLVNL 53
V+L + +N AIK +KK R ++ EK E+ N ++ HP ++ L
Sbjct: 52 VLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL 111
Query: 54 FACFQTEAHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRP 112
F F+ + + V E+ GG+L I + F E A ++ G+ YLH+ I++R
Sbjct: 112 FDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHR- 170
Query: 113 QSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK---EGMGFGDRT 169
+IK + I L ++ +KI DFGL + DR
Sbjct: 171 -------DIK--------------PENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR- 208
Query: 170 GTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
GT ++APEVL + Y D W GV+++ +L G PF G +++++ +
Sbjct: 209 ---LGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 96/237 (40%), Gaps = 43/237 (18%)
Query: 8 NTGEYFAIKALKKGDIIARD----EVESLLSEK--RIFEVANTMRHPFLVNLFACFQTEA 61
N G F + G ++AR E++ + + R +V + P++V + F ++
Sbjct: 18 NGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 77
Query: 62 HVCFVMEYAAGGDLMMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ ME+ GG L + A E + V+ GL YL E + I +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE-------KHKIMHRD 130
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VNS EIKL DFG+ G +F GT +++
Sbjct: 131 VK------PSNILVNSRGEIKL-----------CDFGV--SGQLIDSMANSFVGTRSYMS 171
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE----------EVFDSIVND 227
PE L T Y+ D W +G+ + EM VG P P D + E+ D IVN+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNE 228
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 39/250 (15%)
Query: 10 GEYFAIK-ALKKGDIIARDE-------VESLLSEKRIFEVANTMRHPFLVNLFACFQTEA 61
G + +K A++KG I R VE + K+ E+ ++ HP ++ L+ F+
Sbjct: 37 GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT 96
Query: 62 HVCFVMEYAAGGDLMMH-IHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ VME GG+L +H VF E A V+ + Y H + N+ +
Sbjct: 97 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH--------KLNVAHRD 148
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDT-EGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+K EN+ L + D+ + +K+ DFGL G T GTP ++
Sbjct: 149 LK------PENF---------LFLTDSPDSPLKLIDFGLAAR-FKPGKMMRTKVGTPYYV 192
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FL 235
+P+VL E Y D W GV+++ +L G PF + EV I +P +
Sbjct: 193 SPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNV 251
Query: 236 SLEAIAIMRR 245
S +A +++RR
Sbjct: 252 SPQAESLIRR 261
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 33/220 (15%)
Query: 8 NTGEYFAIKALKKGDIIARD----EVESLLSEK--RIFEVANTMRHPFLVNLFACFQTEA 61
N G F + G ++AR E++ + + R +V + P++V + F ++
Sbjct: 18 NGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 77
Query: 62 HVCFVMEYAAGGDLMMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ ME+ GG L + A E + V+ GL YL E + I +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE-------KHKIMHRD 130
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VNS EIKL DFG+ G +F GT +++
Sbjct: 131 VK------PSNILVNSRGEIKL-----------CDFGV--SGQLIDSMANSFVGTRSYMS 171
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEV 220
PE L T Y+ D W +G+ + EM VG P P D +E+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
Query: 8 NTGEYFAIKALKKGDIIARD----EVESLLSEK--RIFEVANTMRHPFLVNLFACFQTEA 61
N G F + G ++AR E++ + + R +V + P++V + F ++
Sbjct: 80 NGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 139
Query: 62 HVCFVMEYAAGGDLMMHIH-ADVFSEPRAVFYAACVVLGLQYLHES-RIIYRPQSNITKE 119
+ ME+ GG L + A E + V+ GL YL E +I++R
Sbjct: 140 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR-------- 191
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K N VNS EIKL DFG+ G +F GT ++
Sbjct: 192 DVK------PSNILVNSRGEIKL-----------CDFGVS--GQLIDSMANSFVGTRSYM 232
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEV 220
+PE L T Y+ D W +G+ + EM VG P P D +E+
Sbjct: 233 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 273
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
Query: 8 NTGEYFAIKALKKGDIIARD----EVESLLSEK--RIFEVANTMRHPFLVNLFACFQTEA 61
N G F + G ++AR E++ + + R +V + P++V + F ++
Sbjct: 45 NGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 104
Query: 62 HVCFVMEYAAGGDLMMHIH-ADVFSEPRAVFYAACVVLGLQYLHES-RIIYRPQSNITKE 119
+ ME+ GG L + A E + V+ GL YL E +I++R
Sbjct: 105 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR-------- 156
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K N VNS EIKL DFG+ G +F GT ++
Sbjct: 157 DVK------PSNILVNSRGEIKL-----------CDFGVS--GQLIDSMANSFVGTRSYM 197
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEV 220
+PE L T Y+ D W +G+ + EM VG P P D +E+
Sbjct: 198 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 238
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 33/220 (15%)
Query: 8 NTGEYFAIKALKKGDIIARD----EVESLLSEK--RIFEVANTMRHPFLVNLFACFQTEA 61
N G F + G ++AR E++ + + R +V + P++V + F ++
Sbjct: 18 NGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 77
Query: 62 HVCFVMEYAAGGDLMMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ ME+ GG L + A E + V+ GL YL E + I +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE-------KHKIMHRD 130
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VNS EIKL DFG+ G +F GT +++
Sbjct: 131 VK------PSNILVNSRGEIKL-----------CDFGV--SGQLIDSMANSFVGTRSYMS 171
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEV 220
PE L T Y+ D W +G+ + EM VG P P D +E+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 35/228 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+ + R T + +A+K + K +D ++L E E+ + HP ++ LF +
Sbjct: 38 VLKCKDRITQQEYAVKVINKASAKNKD-TSTILRE---VELLKKLDHPNIMKLFEILEDS 93
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ V E GG+L I FSE A V G+ Y+H+ I++R
Sbjct: 94 SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHR-------- 145
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC---KEGMGFGDRTGTFCGTP 176
++K + I L + + +KI DFGL ++ DR GT
Sbjct: 146 DLK--------------PENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGT----A 187
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
++APEVL T Y D W GV+++ +L G PF G +E ++ +
Sbjct: 188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 39/250 (15%)
Query: 10 GEYFAIK-ALKKGDIIARDE-------VESLLSEKRIFEVANTMRHPFLVNLFACFQTEA 61
G + +K A++KG I R VE + K+ E+ ++ HP ++ L+ F+
Sbjct: 20 GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT 79
Query: 62 HVCFVMEYAAGGDLMMH-IHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ VME GG+L +H VF E A V+ + Y H + N+ +
Sbjct: 80 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH--------KLNVAHRD 131
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDT-EGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
+K EN+ L + D+ + +K+ DFGL G T GTP ++
Sbjct: 132 LK------PENF---------LFLTDSPDSPLKLIDFGLAAR-FKPGKMMRTKVGTPYYV 175
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FL 235
+P+VL E Y D W GV+++ +L G PF + EV I +P +
Sbjct: 176 SPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNV 234
Query: 236 SLEAIAIMRR 245
S +A +++RR
Sbjct: 235 SPQAESLIRR 244
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 35/228 (15%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+ + R T + +A+K + K +D ++L E E+ + HP ++ LF +
Sbjct: 38 VLKCKDRITQQEYAVKVINKASAKNKD-TSTILRE---VELLKKLDHPNIMKLFEILEDS 93
Query: 61 AHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ V E GG+L I FSE A V G+ Y+H+ I++R
Sbjct: 94 SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHR-------- 145
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC---KEGMGFGDRTGTFCGTP 176
++K + I L + + +KI DFGL ++ DR GT
Sbjct: 146 DLK--------------PENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGT----A 187
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
++APEVL T Y D W GV+++ +L G PF G +E ++ +
Sbjct: 188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 33/227 (14%)
Query: 8 NTGEYFAIKALKKGDIIARD----EVESLLSEK--RIFEVANTMRHPFLVNLFACFQTEA 61
N G F + G ++AR E++ + + R +V + P++V + F ++
Sbjct: 21 NGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 80
Query: 62 HVCFVMEYAAGGDLMMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ ME+ GG L + A E + V+ GL YL E + I +
Sbjct: 81 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE-------KHKIMHRD 133
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VNS EIKL DFG+ G + F GT +++
Sbjct: 134 VK------PSNILVNSRGEIKL-----------CDFGV--SGQLIDEMANEFVGTRSYMS 174
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVND 227
PE L T Y+ D W +G+ + EM VG P P E+ D IVN+
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNE 221
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 11 EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYA 70
E + A K D + +E+E + E ++ + HP +V L F E ++ ++E+
Sbjct: 60 ETSVLAAAKVIDTKSEEELEDYMVE---IDILASCDHPNIVKLLDAFYYENNLWILIEFC 116
Query: 71 AGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
AGG D +M +E + + L YLH+++II+R ++K
Sbjct: 117 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR--------DLK------ 162
Query: 129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTET 187
+ I T++ G +K+ADFG+ + R +F GTP ++APE V+ ET
Sbjct: 163 --------AGNILFTLD---GDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCET 211
Query: 188 SYTRAVDW----WGLGVLIFEMLVGESP 211
S R D+ W LG+ + EM E P
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 11 EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYA 70
E + A K D + +E+E + E ++ + HP +V L F E ++ ++E+
Sbjct: 60 ETSVLAAAKVIDTKSEEELEDYMVE---IDILASCDHPNIVKLLDAFYYENNLWILIEFC 116
Query: 71 AGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
AGG D +M +E + + L YLH+++II+R ++K
Sbjct: 117 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR--------DLK------ 162
Query: 129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTET 187
+ I T++ G +K+ADFG+ + R +F GTP ++APE V+ ET
Sbjct: 163 --------AGNILFTLD---GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCET 211
Query: 188 SYTRAVDW----WGLGVLIFEMLVGESP 211
S R D+ W LG+ + EM E P
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 11 EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYA 70
E + A K D + +E+E + E ++ + HP +V L F E ++ ++E+
Sbjct: 60 ETSVLAAAKVIDTKSEEELEDYMVE---IDILASCDHPNIVKLLDAFYYENNLWILIEFC 116
Query: 71 AGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
AGG D +M +E + + L YLH+++II+R ++K
Sbjct: 117 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR--------DLK------ 162
Query: 129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTET 187
+ I T++ G +K+ADFG+ + R F GTP ++APE V+ ET
Sbjct: 163 --------AGNILFTLD---GDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCET 211
Query: 188 SYTRAVDW----WGLGVLIFEMLVGESP 211
S R D+ W LG+ + EM E P
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 93/223 (41%), Gaps = 50/223 (22%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVA--NTMRHPFLVNL------FACF 57
+++TGE AIK R E+ E+ E+ + HP +V+
Sbjct: 36 HQDTGEQVAIKQ-------CRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKL 88
Query: 58 QTEAHVCFVMEYAAGGDLMMHIH----ADVFSEPRAVFYAACVVLGLQYLHESRIIYR-- 111
MEY GGDL +++ E + + L+YLHE+RII+R
Sbjct: 89 APNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDL 148
Query: 112 -PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG-LCKEGMGFGDRT 169
P++ + + +R+ K+ I L GY K D G LC E
Sbjct: 149 KPENIVLQPGPQRLIHKI-----------IDL------GYAKELDQGELCTE-------- 183
Query: 170 GTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
F GT ++LAPE+L + YT VD+W G L FE + G PF
Sbjct: 184 --FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 93/223 (41%), Gaps = 50/223 (22%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVA--NTMRHPFLVNL------FACF 57
+++TGE AIK R E+ E+ E+ + HP +V+
Sbjct: 35 HQDTGEQVAIKQ-------CRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKL 87
Query: 58 QTEAHVCFVMEYAAGGDLMMHIH----ADVFSEPRAVFYAACVVLGLQYLHESRIIYR-- 111
MEY GGDL +++ E + + L+YLHE+RII+R
Sbjct: 88 APNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDL 147
Query: 112 -PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG-LCKEGMGFGDRT 169
P++ + + +R+ K+ I L GY K D G LC E
Sbjct: 148 KPENIVLQPGPQRLIHKI-----------IDL------GYAKELDQGELCTE-------- 182
Query: 170 GTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
F GT ++LAPE+L + YT VD+W G L FE + G PF
Sbjct: 183 --FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 44/221 (19%)
Query: 6 YRNTGEYFAIKALK-KGDIIARDEVESLLSEKR-----IFEVANTMRHPFLVNLFACFQT 59
+R TG FA+K ++ + ++ +++E + R + +VA HP ++ L +++
Sbjct: 115 HRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG---HPHIITLIDSYES 171
Query: 60 EAHVCFVMEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITK 118
+ + V + G+L ++ V SE ++ + +LH + I++R
Sbjct: 172 SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHR------- 224
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL-CKEGMGFGDRTGTFCGTPE 177
++K EN ++ + +I+L+ DFG C + G++ CGTP
Sbjct: 225 -DLK------PENILLDDNMQIRLS-----------DFGFSCH--LEPGEKLRELCGTPG 264
Query: 178 FLAPEVL------TETSYTRAVDWWGLGVLIFEMLVGESPF 212
+LAPE+L T Y + VD W GV++F +L G PF
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 33/220 (15%)
Query: 8 NTGEYFAIKALKKGDIIARD----EVESLLSEK--RIFEVANTMRHPFLVNLFACFQTEA 61
N G ++ G I+AR E++ + + R +V + P++V + F ++
Sbjct: 28 NGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 87
Query: 62 HVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ ME+ GG L + A E + V+ GL YL E + I +
Sbjct: 88 EISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLRE-------KHQIMHRD 140
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VNS EIKL DFG+ G +F GT ++A
Sbjct: 141 VK------PSNILVNSRGEIKL-----------CDFGVS--GQLIDSMANSFVGTRSYMA 181
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEV 220
PE L T Y+ D W +G+ + E+ VG P P D +E+
Sbjct: 182 PERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKEL 221
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 44/217 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGLC+ D + T + A
Sbjct: 151 LK------PSNLAVNEDSELK-----------ILDFGLCRHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 36/209 (17%)
Query: 11 EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYA 70
E + A K D + +E+E + E ++ + HP +V L F E ++ ++E+
Sbjct: 33 ETSVLAAAKVIDTKSEEELEDYMVE---IDILASCDHPNIVKLLDAFYYENNLWILIEFC 89
Query: 71 AGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
AGG D +M +E + + L YLH+++II+R ++K
Sbjct: 90 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR--------DLK------ 135
Query: 129 QENYKVNSSQEIKLTVNDTEGYVKIADFGL-CKEGMGFGDRTGTFCGTPEFLAPEV-LTE 186
+ I T++ G +K+ADFG+ K R +F GTP ++APEV + E
Sbjct: 136 --------AGNILFTLD---GDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCE 184
Query: 187 TSYTRAVDW----WGLGVLIFEMLVGESP 211
TS R D+ W LG+ + EM E P
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 93/231 (40%), Gaps = 37/231 (16%)
Query: 8 NTGEYFAIKALKKGDIIARD----EVESLLSEK--RIFEVANTMRHPFLVNLFACFQTEA 61
N G F + G ++AR E++ + + R +V + P++V + F ++
Sbjct: 37 NGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 96
Query: 62 HVCFVMEYAAGGDLMMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ ME+ GG L + A E + V+ GL YL E + I +
Sbjct: 97 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE-------KHKIMHRD 149
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VNS EIKL DFG+ G +F GT +++
Sbjct: 150 VK------PSNILVNSRGEIKL-----------CDFGV--SGQLIDSMANSFVGTRSYMS 190
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE----EVFDSIVND 227
PE L T Y+ D W +G+ + EM VG P E+ D IVN+
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNE 241
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 40/234 (17%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K LK G + V++ L E + + T++H LV L+A E +
Sbjct: 33 YYNNSTKVAVKTLKPGTM----SVQAFLEEANLMK---TLQHDKLVRLYAVVTREEPIYI 85
Query: 66 VMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIK 122
+ EY A G L+ + +D + P+ + ++A + G+ Y+ I+R +++
Sbjct: 86 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHR--------DLR 137
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLA 180
V E+ KIADFGL + E + R G ++ A
Sbjct: 138 AANVLVSESL-----------------MCKIADFGLARVIEDNEYTAREGAKFPI-KWTA 179
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
PE + +T D W G+L++E++ G+ P+PG +V ++ + R PR
Sbjct: 180 PEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTAL-SQGYRMPR 232
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 36/207 (17%)
Query: 17 ALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLM 76
ALKK I + ++ + ++ + HP ++ +A F + + V+E A GDL
Sbjct: 61 ALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLS 120
Query: 77 MHI-----HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
I + E Y + L+++H R+++R +IK +
Sbjct: 121 RMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHR--------DIKPANVFIT-- 170
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAPEVLTETS 188
G VK+ D GL G F +T + GTP +++PE + E
Sbjct: 171 ---------------ATGVVKLGDLGL---GRFFSSKTTAAHSLVGTPYYMSPERIHENG 212
Query: 189 YTRAVDWWGLGVLIFEMLVGESPFPGD 215
Y D W LG L++EM +SPF GD
Sbjct: 213 YNFKSDIWSLGCLLYEMAALQSPFYGD 239
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 21 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ + DL + A + P Y ++ GL + H R+++R
Sbjct: 76 TENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 130
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K EN +N TEG +K+ADFGL + FG T+
Sbjct: 131 ----DLK------PENLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 166
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 227 DEVVWPGVTSM 237
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 19 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ + DL + A + P Y ++ GL + H R+++R
Sbjct: 74 TENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 128
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K EN +N TEG +K+ADFGL + FG T+
Sbjct: 129 ----DLK------PENLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 164
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 225 DEVVWPGVTSM 235
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 45/249 (18%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 17 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 72 TENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 126
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-CG 174
++K +N +N TEG +K+ADFGL + G RT T
Sbjct: 127 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR-AFGVPVRTYTHEVV 164
Query: 175 TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VNDE 228
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++ DE
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 229 VRYPRFLSL 237
V +P S+
Sbjct: 225 VVWPGVTSM 233
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 108/213 (50%), Gaps = 19/213 (8%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D +++ L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 71 AVKMLK--DDATEEDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
+L ++ A P + Y+ + + E ++ ++ + T + + +E +
Sbjct: 127 NLREYLRA---RRPPGMEYS----YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 179
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSY 189
++ +++ + +T N+ +KIADFGL ++ + + +T +++APE L + Y
Sbjct: 180 HRDLAARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 236
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
T D W GVL++E+ +G SP+PG EE+F
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 45/249 (18%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 18 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 73 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHR---- 127
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-CG 174
++K +N +N TEG +K+ADFGL + G RT T
Sbjct: 128 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR-AFGVPVRTYTHEVV 165
Query: 175 TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VNDE 228
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++ DE
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 229 VRYPRFLSL 237
V +P S+
Sbjct: 226 VVWPGVTSM 234
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 45/249 (18%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 18 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 73 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 127
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-CG 174
++K +N +N TEG +K+ADFGL + G RT T
Sbjct: 128 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR-AFGVPVRTYTHEVV 165
Query: 175 TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VNDE 228
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++ DE
Sbjct: 166 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 229 VRYPRFLSL 237
V +P S+
Sbjct: 226 VVWPGVTSM 234
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 45/249 (18%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 18 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 73 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 127
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-CG 174
++K +N +N TEG +K+ADFGL + G RT T
Sbjct: 128 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR-AFGVPVRTYTHEVV 165
Query: 175 TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VNDE 228
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++ DE
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 229 VRYPRFLSL 237
V +P S+
Sbjct: 226 VVWPGVTSM 234
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 45/249 (18%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 17 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 72 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 126
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-CG 174
++K +N +N TEG +K+ADFGL + G RT T
Sbjct: 127 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR-AFGVPVRTYTHEVV 164
Query: 175 TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VNDE 228
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++ DE
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 229 VRYPRFLSL 237
V +P S+
Sbjct: 225 VVWPGVTSM 233
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 45/249 (18%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 25 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 79
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 80 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 134
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-CG 174
++K +N +N TEG +K+ADFGL + G RT T
Sbjct: 135 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR-AFGVPVRTYTHEVV 172
Query: 175 TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VNDE 228
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++ DE
Sbjct: 173 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 229 VRYPRFLSL 237
V +P S+
Sbjct: 233 VVWPGVTSM 241
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+ T E FA+K L+ AR EVE + + + NL+A + + V
Sbjct: 84 KRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVD--VYENLYAGRKC---LLIV 137
Query: 67 MEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
ME GG+L I F+E A + +QYLH I +R ++K
Sbjct: 138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR--------DVK- 188
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
+ + T +K+ DFG KE T T C TP ++APEV
Sbjct: 189 -------------PENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TPCYTPYYVAPEV 234
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
L Y ++ D W LGV+++ +L G PF
Sbjct: 235 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 45/249 (18%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 19 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 74 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 128
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-CG 174
++K +N +N TEG +K+ADFGL + G RT T
Sbjct: 129 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR-AFGVPVRTYTHEVV 166
Query: 175 TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VNDE 228
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++ DE
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 229 VRYPRFLSL 237
V +P S+
Sbjct: 227 VVWPGVTSM 235
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 45/249 (18%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 17 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 72 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 126
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-CG 174
++K +N +N TEG +K+ADFGL + G RT T
Sbjct: 127 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR-AFGVPVRTYTHEVV 164
Query: 175 TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VNDE 228
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++ DE
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 229 VRYPRFLSL 237
V +P S+
Sbjct: 225 VVWPGVTSM 233
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 45/249 (18%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 18 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 73 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 127
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-CG 174
++K +N +N TEG +K+ADFGL + G RT T
Sbjct: 128 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR-AFGVPVRTYTHEVV 165
Query: 175 TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VNDE 228
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++ DE
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 229 VRYPRFLSL 237
V +P S+
Sbjct: 226 VVWPGVTSM 234
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+ T E FA+K L+ AR EVE + + + NL+A + + V
Sbjct: 40 KRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVD--VYENLYAGRKC---LLIV 93
Query: 67 MEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
ME GG+L I F+E A + +QYLH I +R ++K
Sbjct: 94 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR--------DVK- 144
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
+ + T +K+ DFG KE T T C TP ++APEV
Sbjct: 145 -------------PENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TPCYTPYYVAPEV 190
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
L Y ++ D W LGV+++ +L G PF
Sbjct: 191 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 45/249 (18%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 25 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 79
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 80 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 134
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-CG 174
++K +N +N TEG +K+ADFGL + G RT T
Sbjct: 135 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR-AFGVPVRTYTHEVV 172
Query: 175 TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VNDE 228
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++ DE
Sbjct: 173 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 229 VRYPRFLSL 237
V +P S+
Sbjct: 233 VVWPGVTSM 241
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 20 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 75 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 129
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K EN +N TEG +K+ADFGL + FG T+
Sbjct: 130 ----DLK------PENLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 165
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 226 DEVVWPGVTSM 236
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 19 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 74 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 128
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K EN +N TEG +K+ADFGL + FG T+
Sbjct: 129 ----DLK------PENLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 164
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 225 DEVVWPGVTSM 235
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 45/249 (18%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 22 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 76
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 77 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 131
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-CG 174
++K +N +N TEG +K+ADFGL + G RT T
Sbjct: 132 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR-AFGVPVRTYTHEVV 169
Query: 175 TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VNDE 228
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++ DE
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 229
Query: 229 VRYPRFLSL 237
V +P S+
Sbjct: 230 VVWPGVTSM 238
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 51/232 (21%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQTEAHVCF 65
+ TG Y A+K +K D E S R + ++H +V L+ TE +
Sbjct: 27 KTTGVYVALKEVK------LDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTL 80
Query: 66 VMEYAAGGDLMMHIHA-DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNITK 118
V E+ DL ++ + V + PR + ++ ++ GL + HE++I++R
Sbjct: 81 VFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHR------- 132
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG---T 175
++K +N +N G +K+ DFGL + FG TF T
Sbjct: 133 -DLK------PQNLLINK-----------RGQLKLGDFGLAR---AFGIPVNTFSSEVVT 171
Query: 176 PEFLAPEVLTET-SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFD 222
+ AP+VL + +Y+ ++D W G ++ EM+ G+ FPG ++EE +FD
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFD 223
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 42 TGHRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 95 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 146
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D F T + A
Sbjct: 147 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMAGFVATRWYRA 186
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D ++ L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 58 AVKMLK--DDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 113
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
+L ++ A P + Y+ + + E ++ ++ + T + + +E +
Sbjct: 114 NLREYLRA---RRPPGMEYS----YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 166
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSY 189
++ +++ + +T N+ +KIADFGL ++ + + +T +++APE L + Y
Sbjct: 167 HRDLTARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 223
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
T D W GVL++E+ +G SP+PG EE+F
Sbjct: 224 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 256
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGHRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D F T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMAGFVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 105/213 (49%), Gaps = 19/213 (8%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D ++ L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 71 AVKMLK--DDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
+L ++ A P + Y+ + + E ++ ++ + T + + +E +
Sbjct: 127 NLREYLRA---RRPPGMEYS----YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 179
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG--TPEFLAPEVLTETSY 189
++ +++ + +T N+ +KIADFGL ++ T G +++APE L + Y
Sbjct: 180 HRDLAARNVLVTENNV---MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVY 236
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
T D W GVL++E+ +G SP+PG EE+F
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGHRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D F T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMAGFVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+ T E FA+K L+ AR EVE + + + NL+A + + V
Sbjct: 40 KRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVD--VYENLYAGRKC---LLIV 93
Query: 67 MEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
ME GG+L I F+E A + +QYLH I +R ++K
Sbjct: 94 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR--------DVK- 144
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
+ + T +K+ DFG KE T T C TP ++APEV
Sbjct: 145 -------------PENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TPCYTPYYVAPEV 190
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
L Y ++ D W LGV+++ +L G PF
Sbjct: 191 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+ T E FA+K L+ AR EVE + + + NL+A + + V
Sbjct: 90 KRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVD--VYENLYAGRKC---LLIV 143
Query: 67 MEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
ME GG+L I F+E A + +QYLH I +R ++K
Sbjct: 144 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR--------DVK- 194
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
+ + T +K+ DFG KE T T C TP ++APEV
Sbjct: 195 -------------PENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TPCYTPYYVAPEV 240
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
L Y ++ D W LGV+++ +L G PF
Sbjct: 241 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D ++ L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 60 AVKMLK--DDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 115
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
+L ++ A P + Y+ + + E ++ ++ + T + + +E +
Sbjct: 116 NLREYLRA---RRPPGMEYS----YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 168
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSY 189
++ +++ + +T N+ +KIADFGL ++ + + +T +++APE L + Y
Sbjct: 169 HRDLAARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 225
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
T D W GVL++E+ +G SP+PG EE+F
Sbjct: 226 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 258
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+ T E FA+K L+ AR EVE + + + NL+A + + V
Sbjct: 44 KRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVD--VYENLYAGRKC---LLIV 97
Query: 67 MEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
ME GG+L I F+E A + +QYLH I +R ++K
Sbjct: 98 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR--------DVK- 148
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
+ + T +K+ DFG KE T T C TP ++APEV
Sbjct: 149 -------------PENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TPCYTPYYVAPEV 194
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
L Y ++ D W LGV+++ +L G PF
Sbjct: 195 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D ++ L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 63 AVKMLK--DDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 118
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
+L ++ A P + Y+ + + E ++ ++ + T + + +E +
Sbjct: 119 NLREYLRA---RRPPGMEYS----YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 171
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSY 189
++ +++ + +T N+ +KIADFGL ++ + + +T +++APE L + Y
Sbjct: 172 HRDLAARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 228
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
T D W GVL++E+ +G SP+PG EE+F
Sbjct: 229 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 261
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+ T E FA+K L+ AR EVE + + + NL+A + + V
Sbjct: 45 KRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVD--VYENLYAGRKC---LLIV 98
Query: 67 MEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
ME GG+L I F+E A + +QYLH I +R ++K
Sbjct: 99 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR--------DVK- 149
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
+ + T +K+ DFG KE T T C TP ++APEV
Sbjct: 150 -------------PENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TPCYTPYYVAPEV 195
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
L Y ++ D W LGV+++ +L G PF
Sbjct: 196 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+ T E FA+K L+ AR EVE + + + NL+A + + V
Sbjct: 39 KRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVD--VYENLYAGRKC---LLIV 92
Query: 67 MEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
ME GG+L I F+E A + +QYLH I +R ++K
Sbjct: 93 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR--------DVK- 143
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
+ + T +K+ DFG KE T T C TP ++APEV
Sbjct: 144 -------------PENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TPCYTPYYVAPEV 189
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
L Y ++ D W LGV+++ +L G PF
Sbjct: 190 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+ T E FA+K L+ AR EVE + + + NL+A + + V
Sbjct: 38 KRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVD--VYENLYAGRKC---LLIV 91
Query: 67 MEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
ME GG+L I F+E A + +QYLH I +R ++K
Sbjct: 92 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR--------DVK- 142
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
+ + T +K+ DFG KE T T C TP ++APEV
Sbjct: 143 -------------PENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TPCYTPYYVAPEV 188
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
L Y ++ D W LGV+++ +L G PF
Sbjct: 189 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D ++ L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 117 AVKMLK--DDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 172
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
+L ++ A P + Y+ + + E ++ ++ + T + + +E +
Sbjct: 173 NLREYLRA---RRPPGMEYS----YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 225
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSY 189
++ +++ + +T N+ +KIADFGL ++ + + +T +++APE L + Y
Sbjct: 226 HRDLAARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 282
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
T D W GVL++E+ +G SP+PG EE+F
Sbjct: 283 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 315
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+ T E FA+K L+ AR EVE + + + NL+A + + V
Sbjct: 46 KRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVD--VYENLYAGRKC---LLIV 99
Query: 67 MEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
ME GG+L I F+E A + +QYLH I +R ++K
Sbjct: 100 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR--------DVK- 150
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
+ + T +K+ DFG KE T T C TP ++APEV
Sbjct: 151 -------------PENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TPCYTPYYVAPEV 196
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
L Y ++ D W LGV+++ +L G PF
Sbjct: 197 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 21 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 76 TENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 130
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 131 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 166
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 227 DEVVWPGVTSM 237
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 40/235 (17%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K LK G + V++ L E + + T++H LV L+A E +
Sbjct: 32 YYNNSTKVAVKTLKPGTM----SVQAFLEEANLMK---TLQHDKLVRLYAVVTKEEPIYI 84
Query: 66 VMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIK 122
+ E+ A G L+ + +D + P+ + ++A + G+ Y+ I+R +++
Sbjct: 85 ITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHR--------DLR 136
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLA 180
V E+ KIADFGL + E + R G ++ A
Sbjct: 137 AANVLVSESL-----------------MCKIADFGLARVIEDNEYTAREGAKFPI-KWTA 178
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPRF 234
PE + +T + W G+L++E++ G+ P+PG +V S ++ R PR
Sbjct: 179 PEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVM-SALSQGYRMPRM 232
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 17 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 72 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 126
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 127 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 162
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 223 DEVVWPGVTSM 233
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 21 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 76 TENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 130
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 131 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 166
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 227 DEVVWPGVTSM 237
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 18 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 73 TENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 127
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K EN +N TEG +K+ADFGL + FG T+
Sbjct: 128 ----DLK------PENLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 163
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 224 DEVVWPGVTSM 234
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 18 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 73 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 127
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 128 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 163
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 224 DEVVWPGVTSM 234
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+ T E FA+K L+ AR EVE + + + NL+A + + V
Sbjct: 54 KRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVD--VYENLYAGRKC---LLIV 107
Query: 67 MEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
ME GG+L I F+E A + +QYLH I +R ++K
Sbjct: 108 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR--------DVK- 158
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
+ + T +K+ DFG KE T T C TP ++APEV
Sbjct: 159 -------------PENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TPCYTPYYVAPEV 204
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
L Y ++ D W LGV+++ +L G PF
Sbjct: 205 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 105/213 (49%), Gaps = 19/213 (8%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D ++ L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 71 AVKMLK--DDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
+L ++ A P + Y+ + + E ++ ++ + T + + +E +
Sbjct: 127 NLREYLRA---RRPPGMEYS----YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 179
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG--TPEFLAPEVLTETSY 189
++ +++ + +T N+ +KIADFGL ++ T G +++APE L + Y
Sbjct: 180 HRDLAARNVLVTENNV---MKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVY 236
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
T D W GVL++E+ +G SP+PG EE+F
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 21 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 76 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 130
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 131 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 166
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 227 DEVVWPGVTSM 237
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 20 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 75 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 129
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 130 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 165
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 226 DEVVWPGVTSM 236
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 17 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 71
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 72 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 126
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 127 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 162
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 223 DEVVWPGVTSM 233
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 20 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 75 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 129
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 130 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 165
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 226 DEVVWPGVTSM 236
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 18 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 73 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 127
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 128 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 163
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 224 DEVVWPGVTSM 234
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 21 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 76 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 130
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 131 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 166
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 227 DEVVWPGVTSM 237
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 18 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 73 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 127
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 128 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 163
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 224 DEVVWPGVTSM 234
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 19 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 74 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 128
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 129 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 164
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 225 DEVVWPGVTSM 235
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 22 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 76
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 77 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 131
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 132 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 167
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 228 DEVVWPGVTSM 238
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 21 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 75
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ + DL + A + P Y ++ GL + H R+++R
Sbjct: 76 TENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 130
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 131 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 166
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 227 DEVVWPGVTSM 237
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 20 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 74
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ + DL + A + P Y ++ GL + H R+++R
Sbjct: 75 TENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 129
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 130 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 165
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 226 DEVVWPGVTSM 236
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 19 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 73
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 74 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 128
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 129 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 164
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 225 DEVVWPGVTSM 235
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 49/251 (19%)
Query: 2 ILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQ 58
++ + RN TGE A+K ++ E E + S R + + HP +V L
Sbjct: 18 VVYKARNKLTGEVVALKKIR-----LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSN 115
TE + V E+ DL + A + P Y ++ GL + H R+++R
Sbjct: 73 TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---- 127
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG- 174
++K +N +N TEG +K+ADFGL + FG T+
Sbjct: 128 ----DLK------PQNLLIN-----------TEGAIKLADFGLAR---AFGVPVRTYXHE 163
Query: 175 --TPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APE+L Y + AVD W LG + EM+ + FPGD E + +F ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 227 DEVRYPRFLSL 237
DEV +P S+
Sbjct: 224 DEVVWPGVTSM 234
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D ++ L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 71 AVKMLK--DDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
+L ++ A P + Y+ + + E ++ ++ + T + + +E +
Sbjct: 127 NLREYLRA---RRPPGMEYS----YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 179
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSY 189
++ +++ + +T N+ ++IADFGL ++ + + +T +++APE L + Y
Sbjct: 180 HRDLAARNVLVTENNV---MRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 236
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
T D W GVL++E+ +G SP+PG EE+F
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 41/216 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E V EY G
Sbjct: 61 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTLEPPFYIVTEYMPYG 113
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 114 NLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 165
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 166 NH-----------------VVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 206
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFD 222
+++ D W GVL++E+ G SP+PG D +V+D
Sbjct: 207 TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYD 242
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E ++E+ G
Sbjct: 40 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIIIEFMTYG 92
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 93 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 144
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 145 NH-----------------LVKVADFGLSR--LMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKD 226
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 105/218 (48%), Gaps = 29/218 (13%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D +D + L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 64 AVKMLK-SDATEKD-LSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYK 133
+L ++ A EP GL+Y + + P+ ++ +++ +V +
Sbjct: 120 NLREYLQA---REPP----------GLEYSYNPS--HNPEEQLSSKDLVSCAYQVARGME 164
Query: 134 VNSSQEI-------KLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVL 184
+S++ + + + +KIADFGL ++ + + +T +++APE L
Sbjct: 165 YLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 224
Query: 185 TETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
+ YT D W GVL++E+ +G SP+PG EE+F
Sbjct: 225 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 44/217 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 151 LK------PSNLAVNEDXELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 37/211 (17%)
Query: 37 RIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYA 93
R + + HP +V L TE + V E+ DL + A + P Y
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 109
Query: 94 ACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKI 153
++ GL + H R+++R ++K +N +N TEG +K+
Sbjct: 110 FQLLQGLAFCHSHRVLHR--------DLK------PQNLLIN-----------TEGAIKL 144
Query: 154 ADFGLCKEGMGFGDRTGTF-CGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESP 211
ADFGL + G RT T T + APE+L Y + AVD W LG + EM+ +
Sbjct: 145 ADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
Query: 212 FPGDDEEE----VFDSI-VNDEVRYPRFLSL 237
FPGD E + +F ++ DEV +P S+
Sbjct: 204 FPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 37/211 (17%)
Query: 37 RIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSE---PRAVFYA 93
R + + HP +V L TE + V E+ DL + A + P Y
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 108
Query: 94 ACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKI 153
++ GL + H R+++R ++K +N +N TEG +K+
Sbjct: 109 FQLLQGLAFCHSHRVLHR--------DLK------PQNLLIN-----------TEGAIKL 143
Query: 154 ADFGLCKEGMGFGDRTGTF-CGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESP 211
ADFGL + G RT T T + APE+L Y + AVD W LG + EM+ +
Sbjct: 144 ADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
Query: 212 FPGDDEEE----VFDSI-VNDEVRYPRFLSL 237
FPGD E + +F ++ DEV +P S+
Sbjct: 203 FPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 48 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 100
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 101 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 152
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 153 LK------PSNLAVNEDSELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 192
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 33/240 (13%)
Query: 10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEY 69
G A+K L + D A + V L E I + +RHP +V ++ V EY
Sbjct: 60 GSDVAVKILMEQDFHA-ERVNEFLREVAIMK---RLRHPNIVLFMGAVTQPPNLSIVTEY 115
Query: 70 AAGGDLMMHIHA----DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
+ G L +H + E R + A V G+ YLH I +K
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR------NPPIVHRNLKSPN 169
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLT 185
V + Y V K+ DFGL + + + GTPE++APEVL
Sbjct: 170 LLVDKKYTV-----------------KVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLR 212
Query: 186 ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSLEAIAIM 243
+ D + GV+++E+ + P+ + +V ++ + PR L+ + AI+
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAII 272
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGHRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 57 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 109
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 110 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 161
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 162 LK------PSNLAVNEDXELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 201
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 42 TGHRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 95 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 146
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 147 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 186
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 51 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 103
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 104 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 155
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 156 LK------PSNLAVNEDXELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 195
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 52 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 104
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 105 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 156
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 157 LK------PSNLAVNEDSELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 196
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 44/217 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 51 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 103
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 104 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 155
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 156 LK------PSNLAVNEDXELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 195
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 232
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 85/209 (40%), Gaps = 32/209 (15%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+ T E FA+K L+ AR EVE + + + NL+A + + V
Sbjct: 38 KRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVD--VYENLYAGRKC---LLIV 91
Query: 67 MEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
ME GG+L I F+E A + +QYLH I +R ++K
Sbjct: 92 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR--------DVK- 142
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
+ + T +K+ DFG KE T C TP ++APEV
Sbjct: 143 -------------PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEP-CYTPYYVAPEV 188
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
L Y ++ D W LGV+++ +L G PF
Sbjct: 189 LGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E ++E+ G
Sbjct: 43 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIIIEFMTYG 95
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 96 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 147
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 148 NH-----------------LVKVADFGLSR--LMTGDTXTAHAGAKFPIKWTAPESLAYN 188
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 189 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 229
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 33/240 (13%)
Query: 10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEY 69
G A+K L + D A + V L E I + +RHP +V ++ V EY
Sbjct: 60 GSDVAVKILMEQDFHA-ERVNEFLREVAIMK---RLRHPNIVLFMGAVTQPPNLSIVTEY 115
Query: 70 AAGGDLMMHIHA----DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
+ G L +H + E R + A V G+ YLH I ++K
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR------NPPIVHRDLKSPN 169
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLT 185
V + Y V K+ DFGL + + GTPE++APEVL
Sbjct: 170 LLVDKKYTV-----------------KVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 186 ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSLEAIAIM 243
+ D + GV+++E+ + P+ + +V ++ + PR L+ + AI+
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAII 272
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 40 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 92
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 93 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 144
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 145 NH-----------------LVKVADFGLSR--LMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKD 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 56 TGHRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 108
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 109 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 160
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 161 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 200
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 238
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 65 TGHRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 117
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 118 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 169
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 170 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 209
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L K +S++ KR + + M+H ++ L F E
Sbjct: 58 TGLRVAVKKLSK-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 110
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 111 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 162
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 163 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 202
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 52 TGHRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 104
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 105 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 156
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 157 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 196
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 66 TGHRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 118
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 119 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 170
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 171 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 210
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D ++ L+SE + ++ +H +++L + + ++EYA+ G
Sbjct: 71 AVKMLK--DDATEKDLSDLVSEMEMMKMIG--KHKNIIHLLGACTQDGPLYVIVEYASKG 126
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
+L ++ A P + Y+ + + E ++ ++ + T + + +E +
Sbjct: 127 NLREYLRA---RRPPGMEYS----YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 179
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSY 189
++ +++ + +T N+ +KIADFGL ++ + + +T +++APE L + Y
Sbjct: 180 HRDLAARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 236
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
T D W GVL++E+ +G SP+PG EE+F
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E ++E+ G
Sbjct: 47 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIIIEFMTYG 99
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 100 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 151
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 152 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 233
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D ++ L+SE + ++ +H ++NL + + ++ YA+ G
Sbjct: 71 AVKMLK--DDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVAYASKG 126
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
+L ++ A P + Y+ + + E ++ ++ + T + + +E +
Sbjct: 127 NLREYLRA---RRPPGMEYS----YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 179
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSY 189
++ +++ + +T N+ +KIADFGL ++ + + +T +++APE L + Y
Sbjct: 180 HRDLAARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 236
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
T D W GVL++E+ +G SP+PG EE+F
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 41/214 (19%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH--- 62
+R TG+ A+K L AR EV+ ++ + P +V + ++ H
Sbjct: 31 HRRTGQKCALKLLYDSPK-ARQEVD------HHWQASGG---PHIVCILDVYENMHHGKR 80
Query: 63 -VCFVMEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITK 118
+ +ME GG+L I F+E A + +Q+LH I +R
Sbjct: 81 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHR------- 133
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEF 178
++K + + T + + +K+ DFG KE + T C TP +
Sbjct: 134 -DVK--------------PENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTPCYTPYY 176
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+APEVL Y ++ D W LGV+++ +L G PF
Sbjct: 177 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 90/226 (39%), Gaps = 45/226 (19%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF--- 57
V ++ TG+ AIK + + DE E + E I + H + + F
Sbjct: 40 VYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQE--INMLKKYSHHRNIATYYGAFIKK 93
Query: 58 ---QTEAHVCFVMEYAAGG---DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYR 111
+ + VME+ G DL+ + + E + ++ GL +LH+ ++I+R
Sbjct: 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHR 153
Query: 112 PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGT 171
+IK Q + LT N VK+ DFG+ + R T
Sbjct: 154 --------DIK--------------GQNVLLTEN---AEVKLVDFGVSAQLDRTVGRRNT 188
Query: 172 FCGTPEFLAPEVLT-----ETSYTRAVDWWGLGVLIFEMLVGESPF 212
F GTP ++APEV+ + +Y D W LG+ EM G P
Sbjct: 189 FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 42 TGHRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 95 FNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 146
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 147 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 186
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 53 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 106 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 157
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 158 LK------PSNLAVNEDCELK-----------ILDFGLARHT---ADEMTGYVATRWYRA 197
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 41/214 (19%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH--- 62
+R TG+ A+K L AR EV+ ++ + P +V + ++ H
Sbjct: 50 HRRTGQKCALKLLYDSPK-ARQEVD------HHWQASGG---PHIVCILDVYENMHHGKR 99
Query: 63 -VCFVMEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITK 118
+ +ME GG+L I F+E A + +Q+LH I +R
Sbjct: 100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHR------- 152
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEF 178
++K + + T + + +K+ DFG KE + T C TP +
Sbjct: 153 -DVK--------------PENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTPCYTPYY 195
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+APEVL Y ++ D W LGV+++ +L G PF
Sbjct: 196 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 53 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 106 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 157
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 158 LK------PSNLAVNEDCELK-----------ILDFGLARHT---ADEMTGYVATRWYRA 197
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 47 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 99
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 100 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 151
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 152 NH-----------------LVKVADFGLSR--LMTGDTXTAHAGAKFPIKWTAPESLAYN 192
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 233
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D ++ L+SE + ++ +H ++ L + + ++EYA+ G
Sbjct: 71 AVKMLK--DDATEKDLSDLVSEMEMMKMIG--KHKNIITLLGACTQDGPLYVIVEYASKG 126
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
+L ++ A P + Y+ + + E ++ ++ + T + + +E +
Sbjct: 127 NLREYLRA---RRPPGMEYS----YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 179
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSY 189
++ +++ + +T N+ +KIADFGL ++ + + +T +++APE L + Y
Sbjct: 180 HRDLAARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 236
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
T D W GVL++E+ +G SP+PG EE+F
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E ++E+ G
Sbjct: 42 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIIIEFMTYG 94
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 95 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 146
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 147 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 53 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 106 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 157
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 158 LK------PSNLAVNEDCELK-----------ILDFGLARHT---ADEMTGYVATRWYRA 197
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E ++E+ G
Sbjct: 42 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIIIEFMTYG 94
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 95 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 146
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 147 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 80/210 (38%), Gaps = 37/210 (17%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
RN+ E AIK + + ++ + ++ E R + +RHP + C+ E V
Sbjct: 77 RNS-EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ---KLRHPNTIQYRGCYLREHTAWLV 132
Query: 67 MEYAAG-GDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
MEY G ++ +H E + GL YLH +I+R ++K
Sbjct: 133 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR--------DVKAGN 184
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV-- 183
+ E G VK+ DFG F GTP ++APEV
Sbjct: 185 ILLSE-----------------PGLVKLGDFG----SASIMAPANXFVGTPYWMAPEVIL 223
Query: 184 -LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+ E Y VD W LG+ E+ + P
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D ++ L+SE + ++ +H ++NL + + ++ YA+ G
Sbjct: 71 AVKMLK--DDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVGYASKG 126
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
+L ++ A P + Y+ + + E ++ ++ + T + + +E +
Sbjct: 127 NLREYLRA---RRPPGMEYS----YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 179
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSY 189
++ +++ + +T N+ +KIADFGL ++ + + +T +++APE L + Y
Sbjct: 180 HRDLAARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 236
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
T D W GVL++E+ +G SP+PG EE+F
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D +D + L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 64 AVKMLK-SDATEKD-LSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYK 133
+L ++ A P GL+Y + + P+ ++ +++ +V +
Sbjct: 120 NLREYLQA---RRPP----------GLEYCYNPS--HNPEEQLSSKDLVSCAYQVARGME 164
Query: 134 VNSSQEI-------KLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVL 184
+S++ + + + +KIADFGL ++ + + +T +++APE L
Sbjct: 165 YLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 224
Query: 185 TETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
+ YT D W GVL++E+ +G SP+PG EE+F
Sbjct: 225 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 40 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 92
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 93 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 144
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 145 NH-----------------LVKVADFGLSR--LMTGDTFTAHAGAKFPIKWTAPESLAYN 185
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKD 226
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVC----FVMEY 69
A+K L+ +ARD L +R + A + HP +V ++A + E VMEY
Sbjct: 41 AVKVLRAD--LARDP-SFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEY 97
Query: 70 AAGGDLMMHIHADVFSEP-RAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
G L +H + P RA+ A L + H++ II+R ++K
Sbjct: 98 VDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHR--------DVK------ 143
Query: 129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD---RTGTFCGTPEFLAPEVLT 185
N ++++ VK+ DFG+ + G+ +T GT ++L+PE
Sbjct: 144 PANIMISATNA-----------VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 186 ETSYTRAVDWWGLGVLIFEMLVGESPFPGD 215
S D + LG +++E+L GE PF GD
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D +D + L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 49 AVKMLK-SDATEKD-LSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 104
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYK 133
+L ++ A P GL+Y + + P+ ++ +++ +V +
Sbjct: 105 NLREYLQA---RRPP----------GLEYCYNPS--HNPEEQLSSKDLVSCAYQVARGME 149
Query: 134 VNSSQEI-------KLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVL 184
+S++ + + + +KIADFGL ++ + + +T +++APE L
Sbjct: 150 YLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 209
Query: 185 TETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
+ YT D W GVL++E+ +G SP+PG EE+F
Sbjct: 210 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 80/210 (38%), Gaps = 37/210 (17%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
RN+ E AIK + + ++ + ++ E R + +RHP + C+ E V
Sbjct: 38 RNS-EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ---KLRHPNTIQYRGCYLREHTAWLV 93
Query: 67 MEYAAG-GDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
MEY G ++ +H E + GL YLH +I+R ++K
Sbjct: 94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR--------DVKAGN 145
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV-- 183
+ E G VK+ DFG F GTP ++APEV
Sbjct: 146 ILLSE-----------------PGLVKLGDFG----SASIMAPANXFVGTPYWMAPEVIL 184
Query: 184 -LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+ E Y VD W LG+ E+ + P
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIKA+ I R++ E+L +R ++ + H +V++ + + VMEY G
Sbjct: 40 AIKAIF---IPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP 96
Query: 74 DLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENY 132
L +I + S A+ + ++ G+++ H+ RI++R +IK
Sbjct: 97 TLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHR--------DIK---------- 138
Query: 133 KVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFG-DRTGTFCGTPEFLAPEVLTETSYTR 191
Q I + N T +KI DFG+ K +T GT ++ +PE +
Sbjct: 139 ----PQNILIDSNKT---LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 192 AVDWWGLGVLIFEMLVGESPFPGD 215
D + +G++++EMLVGE PF G+
Sbjct: 192 CTDIYSIGIVLYEMLVGEPPFNGE 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 55 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 107
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 108 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 159
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 160 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 200
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 201 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 241
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V+ + ++TG AIK + D D++ ++ + I ++ +RH LVNL + +
Sbjct: 41 VMKCRNKDTGRIVAIKKFLESD---DDKMVKKIAMREI-KLLKQLRHENLVNLLEVCKKK 96
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAAC------VVLGLQYLHESRIIYRPQS 114
V E+ I D+ P + Y ++ G+ + H II+R
Sbjct: 97 KRWYLVFEFVDHT-----ILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHR--- 148
Query: 115 NITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG 174
+IK EN V+ S G VK+ DFG + G+
Sbjct: 149 -----DIK------PENILVSQS-----------GVVKLCDFGFARTLAAPGEVYDDEVA 186
Query: 175 TPEFLAPEVLT-ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
T + APE+L + Y +AVD W +G L+ EM +GE FPGD +
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 43 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 95
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 96 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 147
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 148 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 187
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 84/209 (40%), Gaps = 32/209 (15%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+ T E FA+K L+ AR EVE + + + NL+A + + V
Sbjct: 84 KRTQEKFALKXLQDCPK-ARREVELHWRASQCPHIVRIVD--VYENLYAGRKC---LLIV 137
Query: 67 MEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
E GG+L I F+E A + +QYLH I +R ++K
Sbjct: 138 XECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHR--------DVK- 188
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
+ + T +K+ DFG KE T T C TP ++APEV
Sbjct: 189 -------------PENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TPCYTPYYVAPEV 234
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
L Y ++ D W LGV+ + +L G PF
Sbjct: 235 LGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 51 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 103
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 104 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 155
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 156 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 195
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 44/217 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 44 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 96
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 97 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 148
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 149 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 230
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 47 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 99
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 100 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 151
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 152 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 233
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 42 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 95 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 146
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 147 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 186
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 48 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 100
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 101 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 152
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 153 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 192
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 43 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 95
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 96 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 147
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 148 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 187
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 246 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 298
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R + V E
Sbjct: 299 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------NLAARNCLVGE 350
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 351 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 391
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 392 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 432
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 58 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 110
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 111 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 162
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 163 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 202
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 58 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 110
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 111 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 162
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 163 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 202
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 44/217 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 46 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 98
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 99 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 150
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 151 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 191
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 232
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 51 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 103
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 104 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 155
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 156 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 195
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 57 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 109
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 110 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 161
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 162 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 201
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 44 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 96
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 97 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 148
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 149 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 188
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 45 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 97
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 98 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 149
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 150 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 189
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 227
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 44 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 96
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 97 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 148
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 149 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 230
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 53 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 106 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 157
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 158 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 197
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 47 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 99
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 100 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 151
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 152 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 233
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 66 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 118
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 119 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 170
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 171 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 210
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 48 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 100
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 101 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 152
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 153 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 192
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 48 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 100
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 101 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 152
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 153 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 192
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 44/217 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 249 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 301
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R + V E
Sbjct: 302 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR--------NLAARNCLVGE 353
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 354 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 394
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 395 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 435
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 41/226 (18%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ-- 58
V +++ TG+ FAIK + +V+ R FEV + H +V LFA +
Sbjct: 25 VFRGRHKKTGDLFAIKVFNNISFLRPVDVQ-----MREFEVLKKLNHKNIVKLFAIEEET 79
Query: 59 TEAHVCFVMEYAAGGDL--MMHIHADVFSEPRAVFYAAC--VVLGLQYLHESRIIYRPQS 114
T H +ME+ G L ++ ++ + P + F VV G+ +L E+ I++R
Sbjct: 80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR--- 136
Query: 115 NITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG 174
NI I R+ + D + K+ DFG +E + ++ + G
Sbjct: 137 NIKPGNIMRVIGE------------------DGQSVYKLTDFGAARE-LEDDEQFVSLYG 177
Query: 175 TPEFLAPEVLT--------ETSYTRAVDWWGLGVLIFEMLVGESPF 212
T E+L P++ + Y VD W +GV + G PF
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 49/228 (21%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D +D + L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 53 AVKMLK-SDATEKD-LSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 108
Query: 74 DLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNI 116
+L ++ A + S V A V G++YL + I+R ++
Sbjct: 109 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR---DL 165
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+ E V +KIADFGL ++ + + +T
Sbjct: 166 AARNVLVTEDNV----------------------MKIADFGLARDIHHIDYYKKTTNGRL 203
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
+++APE L + YT D W GVL++E+ +G SP+PG EE+F
Sbjct: 204 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 251
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 42 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 94
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 95 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 146
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 147 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 52 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 104
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 105 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 156
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 157 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 196
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 69 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 121
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 122 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 173
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 174 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMXGYVATRWYRA 213
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 42 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 94
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 95 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 146
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 147 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 49/228 (21%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D +D + L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 64 AVKMLK-SDATEKD-LSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 74 DLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNI 116
+L ++ A + S V A V G++YL + I+R ++
Sbjct: 120 NLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR---DL 176
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG-- 174
+ E V +KIADFGL ++ T G
Sbjct: 177 AARNVLVTEDNV----------------------MKIADFGLARDIHHIDXXKKTTNGRL 214
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
+++APE L + YT D W GVL++E+ +G SP+PG EE+F
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D ++ L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 71 AVKMLK--DDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
+L ++ A P + + + + E ++ ++ + T + + +E +
Sbjct: 127 NLREYLRA---RRPPGMEXS----YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 179
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG--TPEFLAPEVLTETSY 189
++ +++ + +T N+ +KIADFGL ++ T G +++APE L + Y
Sbjct: 180 HRDLAARNVLVTENNV---MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVY 236
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
T D W GVL++E+ +G SP+PG EE+F
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 47 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 99
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 100 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 151
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 152 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 233
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 65 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 117
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 118 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 169
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 170 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 209
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 49/228 (21%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D +D + L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 105 AVKMLKS-DATEKD-LSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 160
Query: 74 DLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNI 116
+L ++ A + S V A V G++YL + I+R ++
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR---DL 217
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+ E V +KIADFGL ++ + + +T
Sbjct: 218 AARNVLVTEDNV----------------------MKIADFGLARDIHHIDYYKKTTNGRL 255
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
+++APE L + YT D W GVL++E+ +G SP+PG EE+F
Sbjct: 256 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D +D + L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 64 AVKMLK-SDATEKD-LSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYK 133
+L ++ A P GL+Y + + P+ ++ +++ +V +
Sbjct: 120 NLREYLQA---RRPP----------GLEYSYNPS--HNPEEQLSSKDLVSCAYQVARGME 164
Query: 134 VNSSQEI-------KLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVL 184
+S++ + + + +KIADFGL ++ + + +T +++APE L
Sbjct: 165 YLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 224
Query: 185 TETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
+ YT D W GVL++E+ +G SP+PG EE+F
Sbjct: 225 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 52 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 104
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 105 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 156
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 157 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 196
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 69 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 121
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 122 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 173
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 174 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 213
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 49/228 (21%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D +D + L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 57 AVKMLK-SDATEKD-LSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 112
Query: 74 DLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNI 116
+L ++ A + S V A V G++YL + I+R ++
Sbjct: 113 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR---DL 169
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+ E V +KIADFGL ++ + + +T
Sbjct: 170 AARNVLVTEDNV----------------------MKIADFGLARDIHHIDYYKKTTNGRL 207
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
+++APE L + YT D W GVL++E+ +G SP+PG EE+F
Sbjct: 208 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 255
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 288 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 340
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R + V E
Sbjct: 341 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------NLAARNCLVGE 392
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 393 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 433
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 434 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 474
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 49/228 (21%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D +D + L+SE + ++ +H ++NL + + ++EYA+ G
Sbjct: 56 AVKMLK-SDATEKD-LSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKG 111
Query: 74 DLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNI 116
+L ++ A + S V A V G++YL + I+R ++
Sbjct: 112 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR---DL 168
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+ E V +KIADFGL ++ + + +T
Sbjct: 169 AARNVLVTEDNV----------------------MKIADFGLARDIHHIDYYKKTTNGRL 206
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVF 221
+++APE L + YT D W GVL++E+ +G SP+PG EE+F
Sbjct: 207 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 254
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 42 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 94
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 95 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 146
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 147 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 42 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 94
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 95 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 146
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 147 NH-----------------LVKVADFGLSR--LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 36/215 (16%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVC----FVMEY 69
A+K L+ +ARD L +R + A + HP +V ++ + E VMEY
Sbjct: 41 AVKVLRAD--LARDP-SFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 70 AAGGDLMMHIHADVFSEP-RAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
G L +H + P RA+ A L + H++ II+R ++K
Sbjct: 98 VDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHR--------DVK------ 143
Query: 129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD---RTGTFCGTPEFLAPEVLT 185
N ++++ VK+ DFG+ + G+ +T GT ++L+PE
Sbjct: 144 PANIMISATNA-----------VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 186 ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEV 220
S D + LG +++E+L GE PF GD + V
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSV 227
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 84/206 (40%), Gaps = 37/206 (17%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF--QTEAHVCF 65
TGE A+KALK+G ++ S +R E+ T+ H +V C Q E V
Sbjct: 36 GTGEMVAVKALKEG---CGPQLRS--GWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQL 90
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
VMEY G L ++ + + +A + G+ YLH I+R
Sbjct: 91 VMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHR-------------- 136
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK---EGMGFGDRTGTFCGTPEFL-AP 181
A N + D + VKI DFGL K EG + R +P F AP
Sbjct: 137 ALAARN-----------VLLDNDRLVKIGDFGLAKAVPEGHEY-YRVREDGDSPVFWYAP 184
Query: 182 EVLTETSYTRAVDWWGLGVLIFEMLV 207
E L E + A D W GV ++E+L
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 41/255 (16%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V L + R++G IK + K R +V E I EV ++ HP ++ +F F+
Sbjct: 38 VHLVEERSSGLERVIKTINKD----RSQVPMEQIEAEI-EVLKSLDHPNIIKIFEVFEDY 92
Query: 61 AHVCFVMEYAAGGDLMMHI-----HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSN 115
++ VME GG+L+ I SE ++ L Y H ++++ +
Sbjct: 93 HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHK---D 149
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY--VKIADFGLCKEGMGFGDRTGTFC 173
+ E I DT + +KI DFGL E + +
Sbjct: 150 LKPENI---------------------LFQDTSPHSPIKIIDFGLA-ELFKSDEHSTNAA 187
Query: 174 GTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP- 232
GT ++APEV + T D W GV+++ +L G PF G EEV E Y
Sbjct: 188 GTALYMAPEVF-KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAV 246
Query: 233 --RFLSLEAIAIMRR 245
R L+ +A+ ++++
Sbjct: 247 ECRPLTPQAVDLLKQ 261
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 84/206 (40%), Gaps = 37/206 (17%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF--QTEAHVCF 65
TGE A+KALK+G ++ S +R E+ T+ H +V C Q E V
Sbjct: 35 GTGEMVAVKALKEG---CGPQLRS--GWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQL 89
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
VMEY G L ++ + + +A + G+ YLH I+R
Sbjct: 90 VMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHR-------------- 135
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK---EGMGFGDRTGTFCGTPEFL-AP 181
A N + D + VKI DFGL K EG + R +P F AP
Sbjct: 136 ALAARN-----------VLLDNDRLVKIGDFGLAKAVPEGHEY-YRVREDGDSPVFWYAP 183
Query: 182 EVLTETSYTRAVDWWGLGVLIFEMLV 207
E L E + A D W GV ++E+L
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 98/242 (40%), Gaps = 51/242 (21%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK +K+G + D +E EV + HP LV L+ +A +C V E+ G
Sbjct: 55 AIKTIKEGSMSEDDFIEEA-------EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 107
Query: 74 DLMMHIHADVFSEPRAVFYAAC-------VVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
L +D R +F A V G+ YL E+ +I+R +
Sbjct: 108 CL-----SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA------------ 150
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEV 183
N V +Q I K++DFG+ + D+ + GT ++ +PEV
Sbjct: 151 --ARNCLVGENQVI-----------KVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEV 195
Query: 184 LTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRY-PRFLSLEAIA 241
+ + Y+ D W GVL++E+ G+ P+ EV + I Y PR S
Sbjct: 196 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 255
Query: 242 IM 243
IM
Sbjct: 256 IM 257
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 66 TGHRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 118
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 119 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 170
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D T + A
Sbjct: 171 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMXGXVATRWYRA 210
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 43 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 95
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 96 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 147
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 148 NH-----------------LVKVADFGLSR--LMTGDTYTAPAGAKFPIKWTAPESLAYN 188
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 189 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 229
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + EVE L E + + ++HP LV L E + E+ G
Sbjct: 44 AVKTLKEDTM----EVEEFLKEAAVMK---EIKHPNLVQLLGVCTREPPFYIITEFMTYG 96
Query: 74 DLMMHIHADVFSEPRAV---FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
+L+ ++ E AV + A + ++YL + I+R ++ V E
Sbjct: 97 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR--------DLAARNCLVGE 148
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTET 187
N+ VK+ADFGL + + GD G ++ APE L
Sbjct: 149 NH-----------------LVKVADFGLSR--LMTGDTYTAPAGAKFPIKWTAPESLAYN 189
Query: 188 SYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND 227
++ D W GVL++E+ G SP+PG D +V++ + D
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 230
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 98/242 (40%), Gaps = 51/242 (21%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK +++G + D +E EV + HP LV L+ +A +C V E+ G
Sbjct: 35 AIKTIREGAMSEEDFIEEA-------EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 87
Query: 74 DLMMHIHADVFSEPRAVFYAAC-------VVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
L +D R +F A V G+ YL E+ +I+R +
Sbjct: 88 CL-----SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLA------------ 130
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEV 183
N V +Q I K++DFG+ + D+ + GT ++ +PEV
Sbjct: 131 --ARNCLVGENQVI-----------KVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEV 175
Query: 184 LTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRY-PRFLSLEAIA 241
+ + Y+ D W GVL++E+ G+ P+ EV + I Y PR S
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 235
Query: 242 IM 243
IM
Sbjct: 236 IM 237
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I D+GL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDYGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 41/226 (18%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ-- 58
V +++ TG+ FAIK + +V+ R FEV + H +V LFA +
Sbjct: 25 VFRGRHKKTGDLFAIKVFNNISFLRPVDVQ-----MREFEVLKKLNHKNIVKLFAIEEET 79
Query: 59 TEAHVCFVMEYAAGGDL--MMHIHADVFSEPRAVFYAAC--VVLGLQYLHESRIIYRPQS 114
T H +ME+ G L ++ ++ + P + F VV G+ +L E+ I++R
Sbjct: 80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR--- 136
Query: 115 NITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG 174
NI I R+ + D + K+ DFG +E + ++ G
Sbjct: 137 NIKPGNIMRVIGE------------------DGQSVYKLTDFGAARE-LEDDEQFVXLYG 177
Query: 175 TPEFLAPEVLT--------ETSYTRAVDWWGLGVLIFEMLVGESPF 212
T E+L P++ + Y VD W +GV + G PF
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK DE E+L+SE +I +++ +H +VNL V + EY G
Sbjct: 80 AVKMLK--STAHADEKEALMSELKI--MSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYK 133
DL+ + R GL+Y + + P+ ++ ++ ++V +
Sbjct: 136 DLL-----NFLRRKRPP--------GLEYSYNPS--HNPEEQLSSRDLLHFSSQVAQGMA 180
Query: 134 VNSSQEI------KLTVNDTEGYV-KIADFGLCKEGMGFGDR--TGTFCGTPEFLAPEVL 184
+S+ V T G+V KI DFGL ++ M + G +++APE +
Sbjct: 181 FLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 240
Query: 185 TETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND--EVRYPRFLSLEAIA 241
+ YT D W G+L++E+ +G +P+PG F +V D ++ P F +
Sbjct: 241 FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYS 300
Query: 242 IMR 244
IM+
Sbjct: 301 IMQ 303
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 47/230 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
N A+K +K G + VE+ L+E + + T++H LV L A E + +
Sbjct: 204 NKHTKVAVKTMKPGSM----SVEAFLAEANVMK---TLQHDKLVKLHAVVTKEP-IYIIT 255
Query: 68 EYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
E+ A G L+ + +D S+ P+ + ++A + G+ ++ + I+R
Sbjct: 256 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR---------- 305
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL 184
N V++S KIADFGL + G F + + APE +
Sbjct: 306 ----AANILVSASL-----------VCKIADFGLARVGAKFPIK---------WTAPEAI 341
Query: 185 TETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
S+T D W G+L+ E++ G P+PG EV ++ R PR
Sbjct: 342 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPR 390
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 43/199 (21%)
Query: 29 VESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG---DLMMHIHAD--- 82
++ LL E + + HP +V+ + F + + VM+ +GG D++ HI A
Sbjct: 57 MDELLKE---IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH 113
Query: 83 ---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE 139
V E V+ GL+YLH++ I+R ++K + E+
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQIHR--------DVKAGNILLGED-------- 157
Query: 140 IKLTVNDTEGYVKIADFGLCKEGMGFGDRT-----GTFCGTPEFLAPEVLTET-SYTRAV 193
G V+IADFG+ GD T TF GTP ++APEV+ + Y
Sbjct: 158 ---------GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKA 208
Query: 194 DWWGLGVLIFEMLVGESPF 212
D W G+ E+ G +P+
Sbjct: 209 DIWSFGITAIELATGAAPY 227
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 98/242 (40%), Gaps = 51/242 (21%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK +++G + D +E EV + HP LV L+ +A +C V E+ G
Sbjct: 33 AIKTIREGAMSEEDFIEEA-------EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 85
Query: 74 DLMMHIHADVFSEPRAVFYAAC-------VVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
L +D R +F A V G+ YL E+ +I+R +
Sbjct: 86 CL-----SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA------------ 128
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEV 183
N V +Q I K++DFG+ + D+ + GT ++ +PEV
Sbjct: 129 --ARNCLVGENQVI-----------KVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEV 173
Query: 184 LTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRY-PRFLSLEAIA 241
+ + Y+ D W GVL++E+ G+ P+ EV + I Y PR S
Sbjct: 174 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 233
Query: 242 IM 243
IM
Sbjct: 234 IM 235
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 43/199 (21%)
Query: 29 VESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG---DLMMHIHAD--- 82
++ LL E + + HP +V+ + F + + VM+ +GG D++ HI A
Sbjct: 52 MDELLKE---IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH 108
Query: 83 ---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE 139
V E V+ GL+YLH++ I+R ++K + E+
Sbjct: 109 KSGVLDESTIATILREVLEGLEYLHKNGQIHR--------DVKAGNILLGED-------- 152
Query: 140 IKLTVNDTEGYVKIADFGLCKEGMGFGDRT-----GTFCGTPEFLAPEVLTET-SYTRAV 193
G V+IADFG+ GD T TF GTP ++APEV+ + Y
Sbjct: 153 ---------GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKA 203
Query: 194 DWWGLGVLIFEMLVGESPF 212
D W G+ E+ G +P+
Sbjct: 204 DIWSFGITAIELATGAAPY 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGXVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 98/242 (40%), Gaps = 51/242 (21%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK +++G + D +E EV + HP LV L+ +A +C V E+ G
Sbjct: 38 AIKTIREGAMSEEDFIEEA-------EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 90
Query: 74 DLMMHIHADVFSEPRAVFYAAC-------VVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
L +D R +F A V G+ YL E+ +I+R +
Sbjct: 91 CL-----SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA------------ 133
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEV 183
N V +Q I K++DFG+ + D+ + GT ++ +PEV
Sbjct: 134 --ARNCLVGENQVI-----------KVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEV 178
Query: 184 LTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRY-PRFLSLEAIA 241
+ + Y+ D W GVL++E+ G+ P+ EV + I Y PR S
Sbjct: 179 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 238
Query: 242 IM 243
IM
Sbjct: 239 IM 240
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 98/242 (40%), Gaps = 51/242 (21%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK +++G + D +E EV + HP LV L+ +A +C V E+ G
Sbjct: 35 AIKTIREGAMSEEDFIEEA-------EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 87
Query: 74 DLMMHIHADVFSEPRAVFYAAC-------VVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
L +D R +F A V G+ YL E+ +I+R +
Sbjct: 88 CL-----SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA------------ 130
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEV 183
N V +Q I K++DFG+ + D+ + GT ++ +PEV
Sbjct: 131 --ARNCLVGENQVI-----------KVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEV 175
Query: 184 LTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRY-PRFLSLEAIA 241
+ + Y+ D W GVL++E+ G+ P+ EV + I Y PR S
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 235
Query: 242 IM 243
IM
Sbjct: 236 IM 237
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 98/242 (40%), Gaps = 51/242 (21%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK +++G + D +E EV + HP LV L+ +A +C V E+ G
Sbjct: 36 AIKTIREGAMSEEDFIEEA-------EVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG 88
Query: 74 DLMMHIHADVFSEPRAVFYAAC-------VVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
L +D R +F A V G+ YL E+ +I+R +
Sbjct: 89 CL-----SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA------------ 131
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEV 183
N V +Q I K++DFG+ + D+ + GT ++ +PEV
Sbjct: 132 --ARNCLVGENQVI-----------KVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEV 176
Query: 184 LTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRY-PRFLSLEAIA 241
+ + Y+ D W GVL++E+ G+ P+ EV + I Y PR S
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 236
Query: 242 IM 243
IM
Sbjct: 237 IM 238
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVC----FVMEY 69
A+K L+ +ARD L +R + A + HP +V ++ + E VMEY
Sbjct: 41 AVKVLRAD--LARDP-SFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 70 AAGGDLMMHIHADVFSEP-RAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
G L +H + P RA+ A L + H++ II+R ++K
Sbjct: 98 VDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHR--------DVK------ 143
Query: 129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD---RTGTFCGTPEFLAPEVLT 185
N ++++ VK+ DFG+ + G+ +T GT ++L+PE
Sbjct: 144 PANIMISATNA-----------VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 186 ETSYTRAVDWWGLGVLIFEMLVGESPFPGD 215
S D + LG +++E+L GE PF GD
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVC----FVMEY 69
A+K L+ +ARD L +R + A + HP +V ++ + E VMEY
Sbjct: 41 AVKVLRAD--LARDP-SFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 70 AAGGDLMMHIHADVFSEP-RAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
G L +H + P RA+ A L + H++ II+R ++K
Sbjct: 98 VDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHR--------DVK------ 143
Query: 129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD---RTGTFCGTPEFLAPEVLT 185
N ++++ VK+ DFG+ + G+ +T GT ++L+PE
Sbjct: 144 PANIMISATNA-----------VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 186 ETSYTRAVDWWGLGVLIFEMLVGESPFPGD 215
S D + LG +++E+L GE PF GD
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 33/232 (14%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF--QTEAHVC 64
++ G+ K L G + E + L+SE + ++HP +V + +T +
Sbjct: 28 KSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLR---ELKHPNIVRYYDRIIDRTNTTLY 83
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGL---QYLHESRIIYRPQSNIT---K 118
VMEY GGDL A+ + G QYL E + R + +T K
Sbjct: 84 IVMEYCEGGDL-----------------ASVITKGTKERQYLDEE-FVLRVMTQLTLALK 125
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEF 178
E +R + ++ + L D + VK+ DFGL + TF GTP +
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYY 182
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR 230
++PE + SY D W LG L++E+ PF ++E+ I + R
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR 234
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVC----FVMEY 69
A+K L+ +ARD L +R + A + HP +V ++ + E VMEY
Sbjct: 41 AVKVLRAD--LARDP-SFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 70 AAGGDLMMHIHADVFSEP-RAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
G L +H + P RA+ A L + H++ II+R ++K
Sbjct: 98 VDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHR--------DVK------ 143
Query: 129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD---RTGTFCGTPEFLAPEVLT 185
N ++++ VK+ DFG+ + G+ +T GT ++L+PE
Sbjct: 144 PANILISATNA-----------VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 186 ETSYTRAVDWWGLGVLIFEMLVGESPFPGD 215
S D + LG +++E+L GE PF GD
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVC----FVMEY 69
A+K L+ +ARD L +R + A + HP +V ++ + E VMEY
Sbjct: 58 AVKVLRAD--LARDP-SFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 114
Query: 70 AAGGDLMMHIHADVFSEP-RAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
G L +H + P RA+ A L + H++ II+R ++K
Sbjct: 115 VDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHR--------DVK------ 160
Query: 129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD---RTGTFCGTPEFLAPEVLT 185
N ++++ VK+ DFG+ + G+ +T GT ++L+PE
Sbjct: 161 PANIMISATNA-----------VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 209
Query: 186 ETSYTRAVDWWGLGVLIFEMLVGESPFPGD 215
S D + LG +++E+L GE PF GD
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTGEPPFTGD 239
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 43/243 (17%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVA--NTMRHPFLVNLFACFQTEAHVC 64
+NT + AIK +K G R E + ++ + E+ + HP ++ L F ++++
Sbjct: 32 KNTNQIVAIKKIKLGH---RSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88
Query: 65 FVMEYAAGG-DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
V ++ ++++ ++ V + Y + GL+YLH+ I++R
Sbjct: 89 LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR------------ 136
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG---TPEFLA 180
+ K N+ + D G +K+ADFGL K FG + T + A
Sbjct: 137 -------DLKPNN------LLLDENGVLKLADFGLAKS---FGSPNRAYXHQVVTRWYRA 180
Query: 181 PEVL-TETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE----EEVFDSI-VNDEVRYPRF 234
PE+L Y VD W +G ++ E+L+ PGD + +F+++ E ++P
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240
Query: 235 LSL 237
SL
Sbjct: 241 CSL 243
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGHRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DF L + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDFYLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 33/232 (14%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF--QTEAHVC 64
++ G+ K L G + E + L+SE + ++HP +V + +T +
Sbjct: 28 KSDGKILVWKELDYGSM-TEAEKQMLVSEVNLL---RELKHPNIVRYYDRIIDRTNTTLY 83
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGL---QYLHESRIIYRPQSNIT---K 118
VMEY GGDL A+ + G QYL E + R + +T K
Sbjct: 84 IVMEYCEGGDL-----------------ASVITKGTKERQYLDEE-FVLRVMTQLTLALK 125
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEF 178
E +R + ++ + L D + VK+ DFGL + D F GTP +
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDEDFAKEFVGTPYY 182
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR 230
++PE + SY D W LG L++E+ PF ++E+ I + R
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR 234
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 37/196 (18%)
Query: 30 ESLLSEKRIFE---VANTMRHPFLVNLFACFQTEAHV-----CFVMEYAAGGDLMMHIHA 81
+SL+ +R + + ++H ++ L F + +++ G DL + +
Sbjct: 66 QSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS 125
Query: 82 DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIK 141
S+ F ++ GL+Y+H + II+R ++K N VN E++
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAGIIHR--------DLK------PSNVAVNEDSELR 171
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV-LTETSYTRAVDWWGLGV 200
I DFGL ++ + + T + APE+ L Y + VD W +G
Sbjct: 172 -----------ILDFGLARQA---DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 201 LIFEMLVGESPFPGDD 216
++ E+L G++ FPG D
Sbjct: 218 IMAELLQGKALFPGSD 233
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 44/217 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
+G A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 75 SGLKIAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEE 127
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 128 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 179
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I DFGL + D + T + A
Sbjct: 180 LK------PSNLAVNEDCELK-----------ILDFGLARHT---DDEMTGYVATRWYRA 219
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
PE+ L Y VD W +G ++ E+L G + FPG D
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTD 256
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 41/232 (17%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
N A+K +K G + VE+ L+E + + T++H LV L A E + +
Sbjct: 37 NKHTKVAVKTMKPGSM----SVEAFLAEANVMK---TLQHDKLVKLHAVVTKEP-IYIIT 88
Query: 68 EYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
E+ A G L+ + +D S+ P+ + ++A + G+ ++ + I+R
Sbjct: 89 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR---------- 138
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPE 182
N V++S KIADFGL + E + R G ++ APE
Sbjct: 139 ----AANILVSASL-----------VCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPE 182
Query: 183 VLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
+ S+T D W G+L+ E++ G P+PG EV ++ R PR
Sbjct: 183 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPR 233
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I FGL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILGFGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I D GL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDAGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I D GL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDRGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 44/218 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQT-----E 60
TG A+K L + +S++ KR + + M+H ++ L F E
Sbjct: 46 TGLRVAVKKLSR-------PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +++ + G DL + ++ F ++ GL+Y+H + II+R +
Sbjct: 99 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR--------D 150
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 180
+K N VN E+K I D GL + D + T + A
Sbjct: 151 LK------PSNLAVNEDCELK-----------ILDGGLARHT---DDEMTGYVATRWYRA 190
Query: 181 PEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
PE+ L Y + VD W +G ++ E+L G + FPG D
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 41/232 (17%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
N A+K +K G + VE+ L+E + + T++H LV L A E + +
Sbjct: 210 NKHTKVAVKTMKPGSM----SVEAFLAEANVMK---TLQHDKLVKLHAVVTKEP-IYIIT 261
Query: 68 EYAAGGDLMMHIHADVFSE---PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
E+ A G L+ + +D S+ P+ + ++A + G+ ++ + I+R
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR---------- 311
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPE 182
N V++S KIADFGL + E + R G ++ APE
Sbjct: 312 ----AANILVSASL-----------VCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPE 355
Query: 183 VLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
+ S+T D W G+L+ E++ G P+PG EV ++ R PR
Sbjct: 356 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPR 406
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 30 ESLLSEKRIFE---VANTMRHPFLVNLFACFQTEAHV-----CFVMEYAAGGDLMMHIHA 81
+SL+ +R + + ++H ++ L F + +++ G DL +
Sbjct: 66 QSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC 125
Query: 82 DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIK 141
S+ F ++ GL+Y+H + II+R ++K N VN E++
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAGIIHR--------DLK------PSNVAVNEDSELR 171
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV-LTETSYTRAVDWWGLGV 200
I DFGL ++ + + T + APE+ L Y + VD W +G
Sbjct: 172 -----------ILDFGLARQA---DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 201 LIFEMLVGESPFPGDD 216
++ E+L G++ FPG D
Sbjct: 218 IMAELLQGKALFPGSD 233
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 41/220 (18%)
Query: 6 YRNTGEYFAIKALK--KGDIIARDEVESL--LSEKRIFEVANTMRHPFLVNLFACFQTEA 61
++ T + +A+K + G + +EV+ L + K + + HP ++ L ++T
Sbjct: 38 HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97
Query: 62 HVCFVMEYAAGGDLMMHIHADVF---SEPRAVFYAACVVLGLQYLHESRIIYRPQSNITK 118
V + G+L ++ V E R + A V+ LH+ I++R
Sbjct: 98 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA--LHKLNIVHR------- 148
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEF 178
++K EN ++ IKLT DFG + + G++ + CGTP +
Sbjct: 149 -DLK------PENILLDDDMNIKLT-----------DFGFSCQ-LDPGEKLRSVCGTPSY 189
Query: 179 LAPEVL------TETSYTRAVDWWGLGVLIFEMLVGESPF 212
LAPE++ Y + VD W GV+++ +L G PF
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 33/232 (14%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF--QTEAHVC 64
++ G+ K L G + E + L+SE + ++HP +V + +T +
Sbjct: 28 KSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLR---ELKHPNIVRYYDRIIDRTNTTLY 83
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGL---QYLHESRIIYRPQSNIT---K 118
VMEY GGDL A+ + G QYL E + R + +T K
Sbjct: 84 IVMEYCEGGDL-----------------ASVITKGTKERQYLDEE-FVLRVMTQLTLALK 125
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEF 178
E +R + ++ + L D + VK+ DFGL + F GTP +
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYY 182
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR 230
++PE + SY D W LG L++E+ PF ++E+ I + R
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR 234
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
+++ + G DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 122 YLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 171
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 172 ----PSNLLLNTTXDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 107/254 (42%), Gaps = 48/254 (18%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-ACFQTEAHVCFVM 67
T A+K LK+G E +L+SE +I + + H +VNL AC + + ++
Sbjct: 56 TXRTVAVKMLKEG--ATHSEHRALMSELKI--LIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Query: 68 EYAAGGDLMMHIHA-------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQS 114
E+ G+L ++ + D + + Y+ V G+++L + I+R
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHR--- 168
Query: 115 NITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTF 172
++ I E V VKI DFGL ++ D R G
Sbjct: 169 DLAARNILLSEKNV----------------------VKIXDFGLARDIYKDPDYVRKGDA 206
Query: 173 CGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND--EV 229
+++APE + + YT D W GVL++E+ +G SP+PG +E F + + +
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRM 266
Query: 230 RYPRFLSLEAIAIM 243
R P + + E M
Sbjct: 267 RAPDYTTPEMYQTM 280
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 30 ESLLSEKRIFE---VANTMRHPFLVNLFACFQTEAHV-----CFVMEYAAGGDLMMHIHA 81
+SL+ +R + + ++H ++ L F + +++ G DL +
Sbjct: 58 QSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC 117
Query: 82 DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIK 141
S+ F ++ GL+Y+H + II+R ++K N VN E++
Sbjct: 118 QALSDEHVQFLVYQLLRGLKYIHSAGIIHR--------DLK------PSNVAVNEDCELR 163
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV-LTETSYTRAVDWWGLGV 200
I DFGL ++ + + T + APE+ L Y + VD W +G
Sbjct: 164 -----------ILDFGLARQA---DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 209
Query: 201 LIFEMLVGESPFPGDD 216
++ E+L G++ FPG D
Sbjct: 210 IMAELLQGKALFPGSD 225
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 35/195 (17%)
Query: 36 KRIFEVANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYA 93
K+ + + H +V + + E ++ ++ +EY +GG+L I D+ EP A +
Sbjct: 52 KKEIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 94 ACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKI 153
++ G+ YLH I +R +I E + + D +KI
Sbjct: 111 HQLMAGVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKI 145
Query: 154 ADFGLCKEGMGFGDRT---GTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGE 209
+DFGL + +R CGT ++APE+L + VD W G+++ ML GE
Sbjct: 146 SDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 210 SPF--PGDDEEEVFD 222
P+ P D +E D
Sbjct: 205 LPWDQPSDSCQEYSD 219
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 37/175 (21%)
Query: 47 HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVF---SEPRAVFYAACVVLGLQYL 103
HP ++ L ++T V + G+L ++ V E R + A V+ L
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA--L 127
Query: 104 HESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGM 163
H+ I++R ++K EN ++ IKLT DFG + +
Sbjct: 128 HKLNIVHR--------DLK------PENILLDDDMNIKLT-----------DFGFSCQ-L 161
Query: 164 GFGDRTGTFCGTPEFLAPEVL------TETSYTRAVDWWGLGVLIFEMLVGESPF 212
G++ CGTP +LAPE++ Y + VD W GV+++ +L G PF
Sbjct: 162 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 41/220 (18%)
Query: 6 YRNTGEYFAIKALK--KGDIIARDEVESL--LSEKRIFEVANTMRHPFLVNLFACFQTEA 61
++ T + +A+K + G + +EV+ L + K + + HP ++ L ++T
Sbjct: 38 HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97
Query: 62 HVCFVMEYAAGGDLMMHIHADVF---SEPRAVFYAACVVLGLQYLHESRIIYRPQSNITK 118
V + G+L ++ V E R + A V+ LH+ I++R
Sbjct: 98 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA--LHKLNIVHR------- 148
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEF 178
++K EN ++ IKLT DFG + + G++ CGTP +
Sbjct: 149 -DLK------PENILLDDDMNIKLT-----------DFGFSCQ-LDPGEKLREVCGTPSY 189
Query: 179 LAPEVL------TETSYTRAVDWWGLGVLIFEMLVGESPF 212
LAPE++ Y + VD W GV+++ +L G PF
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 91/225 (40%), Gaps = 50/225 (22%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM----RHPFLVNLFACFQTEAHV 63
G+ +A+K ++K ++ S R+F T+ + ++ L F+ +
Sbjct: 36 QNGKEYAVKIIEK---------QAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRF 86
Query: 64 CFVMEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIK 122
V E GG ++ HI F+E A V L +LH I +R ++K
Sbjct: 87 YLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHR--------DLK 138
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG--------TFCG 174
EN S +++ VKI DF L GM + T CG
Sbjct: 139 ------PENILCESPEKVSP--------VKICDFDL-GSGMKLNNSCTPITTPELTTPCG 183
Query: 175 TPEFLAPEVL-----TETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
+ E++APEV+ T Y + D W LGV+++ ML G PF G
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 82/206 (39%), Gaps = 37/206 (17%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF--QTEAHVCF 65
TGE A+KALK A + K+ ++ T+ H ++ C Q E +
Sbjct: 41 GTGEMVAVKALK-----ADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQL 95
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
VMEY G L ++ + + +A + G+ YLH I+R N+ +
Sbjct: 96 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHR---NLAARNV---- 148
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK---EGMGFGDRTGTFCGTPEFL-AP 181
+ D + VKI DFGL K EG + R +P F AP
Sbjct: 149 ------------------LLDNDRLVKIGDFGLAKAVPEGHEYY-RVREDGDSPVFWYAP 189
Query: 182 EVLTETSYTRAVDWWGLGVLIFEMLV 207
E L E + A D W GV ++E+L
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + VMEY + G
Sbjct: 46 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVMEYMSKG 97
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + ++ P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 98 CLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 149
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 150 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 191
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G++ E+ L E +V +RH LV L+A +E + V EY + G
Sbjct: 213 AIKTLKPGNM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG 264
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + ++ P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 265 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 316
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 317 NL-----------------VCKVADFGLGRLIEDNEYTARQGAKFPI-KWTAPEAALYGR 358
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 395
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V+EY + G
Sbjct: 46 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKG 97
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + ++ P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 98 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 149
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 150 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 191
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 40 NTGEVVAVKKLQHS------TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 93
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + HA+ + + Y + + G++YL R I+R ++ I
Sbjct: 94 IMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 148
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 149 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 186
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 56 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 114
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 115 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 149
Query: 159 CKEGMGFGDRT---GTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 150 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 209 PSDSCQEYSD 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 82/206 (39%), Gaps = 37/206 (17%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF--QTEAHVCF 65
TGE A+KALK A + K+ ++ T+ H ++ C Q E +
Sbjct: 41 GTGEMVAVKALK-----ADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQL 95
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
VMEY G L ++ + + +A + G+ YLH I+R N+ +
Sbjct: 96 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHR---NLAARNV---- 148
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK---EGMGFGDRTGTFCGTPEFL-AP 181
+ D + VKI DFGL K EG + R +P F AP
Sbjct: 149 ------------------LLDNDRLVKIGDFGLAKAVPEGHEYY-RVREDGDSPVFWYAP 189
Query: 182 EVLTETSYTRAVDWWGLGVLIFEMLV 207
E L E + A D W GV ++E+L
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 57 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 116 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 150
Query: 159 CKEGMGFGDR---TGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 151 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 210 PSDSCQEYSD 219
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 107/254 (42%), Gaps = 48/254 (18%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-ACFQTEAHVCFVM 67
T A+K LK+G E +L+SE +I + + H +VNL AC + + ++
Sbjct: 56 TXRTVAVKMLKEG--ATHSEHRALMSELKI--LIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Query: 68 EYAAGGDLMMHIHA-------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQS 114
E+ G+L ++ + D + + Y+ V G+++L + I+R
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHR--- 168
Query: 115 NITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTF 172
++ I E V VKI DFGL ++ D R G
Sbjct: 169 DLAARNILLSEKNV----------------------VKICDFGLARDIYKDPDYVRKGDA 206
Query: 173 CGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND--EV 229
+++APE + + YT D W GVL++E+ +G SP+PG +E F + + +
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 266
Query: 230 RYPRFLSLEAIAIM 243
R P + + E M
Sbjct: 267 RAPDYTTPEMYQTM 280
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 27/240 (11%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK DE E+L+SE +I +++ +H +VNL V + EY G
Sbjct: 80 AVKMLK--STAHADEKEALMSELKI--MSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 74 DLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNI-TKEEIKRIEAKVQE 130
DL+ + + V A A + LH S + + + + +K I R A
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVA---- 191
Query: 131 NYKVNSSQEIKLTVNDTEGYV-KIADFGLCKEGMGFGDR--TGTFCGTPEFLAPEVLTET 187
++ + L T G+V KI DFGL ++ M + G +++APE + +
Sbjct: 192 ------ARNVLL----TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC 241
Query: 188 SYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND--EVRYPRFLSLEAIAIMR 244
YT D W G+L++E+ +G +P+PG F +V D ++ P F +IM+
Sbjct: 242 VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ 301
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 34/204 (16%)
Query: 36 KRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA--V 90
++ + A TMR HP +V L TE V +ME G+L + FS A +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLI 114
Query: 91 FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY 150
YA + L YL R ++R +I +++ + ++ ND
Sbjct: 115 LYAYQLSTALAYLESKRFVHR--------DI--------------AARNVLVSSNDC--- 149
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTP-EFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-G 208
VK+ DFGL + + P +++APE + +T A D W GV ++E+L+ G
Sbjct: 150 VKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 209
Query: 209 ESPFPGDDEEEVFDSIVNDEVRYP 232
PF G +V I N E R P
Sbjct: 210 VKPFQGVKNNDVIGRIENGE-RLP 232
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 58 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 117 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 151
Query: 159 CKEGMGFGDRT---GTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 152 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 211 PSDSCQEYSD 220
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 58 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 117 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 151
Query: 159 CKEGMGFGDRT---GTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 152 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 211 PSDSCQEYSD 220
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 58 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 117 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 151
Query: 159 CKEGMGFGDRT---GTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 152 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 211 PSDSCQEYSD 220
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 57 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 116 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 150
Query: 159 CKEGMGFGDRT---GTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 151 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 210 PSDSCQEYSD 219
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 57 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 116 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 150
Query: 159 CKEGMGFGDRT---GTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 151 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 210 PSDSCQEYSD 219
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 57 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 116 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 150
Query: 159 CKEGMGFGDR---TGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 151 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 210 PSDSCQEYSD 219
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 58 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 117 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 151
Query: 159 CKEGMGFGDR---TGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 152 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 211 PSDSCQEYSD 220
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 47/248 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK DE E+L+SE +I +++ +H +VNL V + EY G
Sbjct: 80 AVKMLK--STAHADEKEALMSELKI--MSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 74 DLMMHIH----ADVFSEP-------RAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIK 122
DL+ + AD+ E + +++ V G+ +L I+R
Sbjct: 136 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR----------- 184
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYV-KIADFGLCKEGMGFGDR--TGTFCGTPEFL 179
+ A+ V T G+V KI DFGL ++ M + G +++
Sbjct: 185 DVAAR---------------NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 229
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND--EVRYPRFLS 236
APE + + YT D W G+L++E+ +G +P+PG F +V D ++ P F
Sbjct: 230 APESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAP 289
Query: 237 LEAIAIMR 244
+IM+
Sbjct: 290 KNIYSIMQ 297
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 58 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 117 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 151
Query: 159 CKEGMGFGDRT---GTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 152 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 211 PSDSCQEYSD 220
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 43/241 (17%)
Query: 14 AIKALKKGDIIA----RDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEY 69
AIK + + ++ D V L +++V HP ++ L F+T+ V+E
Sbjct: 60 AIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLER 119
Query: 70 A-AGGDLMMHI--HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
DL +I + P F+ VV +Q+ H +++R +I E I
Sbjct: 120 PLPAQDLFDYITEKGPLGEGPSRCFFGQ-VVAAIQHCHSRGVVHR---DIKDENI----- 170
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLT 185
++ G K+ DFG G D T F GT + PE ++
Sbjct: 171 ----------------LIDLRRGCAKLIDFG---SGALLHDEPYTDFDGTRVYSPPEWIS 211
Query: 186 ETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
Y W LG+L+++M+ G+ PF D E I+ E+ +P +S + A++R
Sbjct: 212 RHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPAHVSPDCCALIR 265
Query: 245 R 245
R
Sbjct: 266 R 266
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY + G
Sbjct: 37 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG 88
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + ++ P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 89 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 140
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 141 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 182
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 183 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 219
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 57 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 116 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 150
Query: 159 CKEGMGFGDR---TGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 151 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 210 PSDSCQEYSD 219
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY + G
Sbjct: 212 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG 263
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + + P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 315
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 316 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 357
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 50/256 (19%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-ACFQTEAHVCFVM 67
T A+K LK+G E +L+SE +I + + H +VNL AC + + ++
Sbjct: 58 TXRTVAVKMLKEG--ATHSEHRALMSELKI--LIHIGHHLNVVNLLGACTKPGGPLMVIV 113
Query: 68 EYAAGGDLMMHIHA---------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRP 112
E+ G+L ++ + D + + Y+ V G+++L + I+R
Sbjct: 114 EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHR- 172
Query: 113 QSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--RTG 170
++ I E V VKI DFGL ++ D R G
Sbjct: 173 --DLAARNILLSEKNV----------------------VKICDFGLARDIXKDPDXVRKG 208
Query: 171 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND-- 227
+++APE + + YT D W GVL++E+ +G SP+PG +E F + +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 228 EVRYPRFLSLEAIAIM 243
+R P + + E M
Sbjct: 269 RMRAPDYTTPEMYQTM 284
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 47/248 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK DE E+L+SE +I +++ +H +VNL V + EY G
Sbjct: 72 AVKMLK--STAHADEKEALMSELKI--MSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 127
Query: 74 DLMMHIH----ADVFSEP-------RAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIK 122
DL+ + AD+ E + +++ V G+ +L I+R
Sbjct: 128 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR----------- 176
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYV-KIADFGLCKEGMGFGDR--TGTFCGTPEFL 179
+ A+ V T G+V KI DFGL ++ M + G +++
Sbjct: 177 DVAAR---------------NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 221
Query: 180 APEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND--EVRYPRFLS 236
APE + + YT D W G+L++E+ +G +P+PG F +V D ++ P F
Sbjct: 222 APESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAP 281
Query: 237 LEAIAIMR 244
+IM+
Sbjct: 282 KNIYSIMQ 289
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E ++ + +RH LV L+A +E + V EY + G
Sbjct: 295 AIKTLKPGTM----SPEAFLQEAQVMK---KLRHEKLVQLYAVV-SEEPIYIVTEYMSKG 346
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + + P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 347 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 398
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 399 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 440
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 441 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 477
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY + G
Sbjct: 212 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG 263
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + + P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 315
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 316 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 357
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY + G
Sbjct: 35 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG 86
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + ++ P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 87 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 138
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 139 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 180
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 181 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 217
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 57 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 116 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 150
Query: 159 CKEGMGFGDR---TGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 151 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 210 PSDSCQEYSD 219
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 94/222 (42%), Gaps = 24/222 (10%)
Query: 6 YRNTGEYFAIKALKKGDI---IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH 62
++ G + A+K +K D AR E++ +L + +T R V + F+ H
Sbjct: 36 HKAGGRHVAVKIVKNVDRYCEAARSEIQ-VLEHLNTTDPNSTFR---CVQMLEWFEHHGH 91
Query: 63 VCFVMEYAAGGDLMMHIHADVF-----SEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+C V E G I + F R + Y C + +LH +++ + +++
Sbjct: 92 ICIVFE-LLGLSTYDFIKENGFLPFRLDHIRKMAYQICK--SVNFLHSNKLTH---TDLK 145
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
E I +++ E Y ++ + +N +K+ DFG + T T
Sbjct: 146 PENILFVQSDYTEAYNPKIKRDERTLINPD---IKVVDFG---SATYDDEHHSTLVSTRH 199
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 219
+ APEV+ +++ D W +G ++ E +G + FP D +E
Sbjct: 200 YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 44/237 (18%)
Query: 6 YRNTGEYFAIKALKKGDIIARDE-VESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVC 64
Y+ I ALK+ + A DE + S + R + + HP +V+L +E +
Sbjct: 38 YKAKDSQGRIVALKRIRLDAEDEGIPS--TAIREISLLKELHHPNIVSLIDVIHSERCLT 95
Query: 65 FVMEYAAGGDL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIK 122
V E+ DL ++ + + + Y ++ G+ + H+ RI++R ++K
Sbjct: 96 LVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHR--------DLK 146
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-CGTPEFLAP 181
+N +NS +G +K+ADFGL + G R+ T T + AP
Sbjct: 147 ------PQNLLINS-----------DGALKLADFGLAR-AFGIPVRSYTHEVVTLWYRAP 188
Query: 182 EVLTETS-YTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSL 237
+VL + Y+ +VD W +G + EM+ G+ FPG V D+ + P+ S+
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG----------VTDDDQLPKIFSI 235
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY + G
Sbjct: 46 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG 97
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + ++ P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 98 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 149
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 150 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 191
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY + G
Sbjct: 39 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG 90
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + + P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 91 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 142
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 143 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 184
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 185 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 221
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 57 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 116 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 150
Query: 159 CKEGMGFGDR---TGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 151 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 210 PSDSCQEYSD 219
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 58 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 117 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 151
Query: 159 CKEGMGFGDR---TGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R CGT ++APE+L + VD W G+++ ML GE P+
Sbjct: 152 ATV-FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 211 PSDSCQEYSD 220
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 67 MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
+EY +GG+L I D+ EP A + ++ G+ YLH I +R +I E +
Sbjct: 84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR---DIKPENL---- 136
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDR---TGTFCGTPEFLAPE 182
+ D +KI+DFGL + +R CGT ++APE
Sbjct: 137 ------------------LLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPE 177
Query: 183 VLTETSY-TRAVDWWGLGVLIFEMLVGESPF--PGDDEEEVFD 222
+L + VD W G+++ ML GE P+ P D +E D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 220
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 27/240 (11%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK DE E+L+SE +I +++ +H +VNL V + EY G
Sbjct: 80 AVKMLK--STAHADEKEALMSELKI--MSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 74 DLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNI-TKEEIKRIEAKVQE 130
DL+ + + V A A LH S + + + + +K I R A
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVA---- 191
Query: 131 NYKVNSSQEIKLTVNDTEGYV-KIADFGLCKEGMGFGDR--TGTFCGTPEFLAPEVLTET 187
++ + L T G+V KI DFGL ++ M + G +++APE + +
Sbjct: 192 ------ARNVLL----TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC 241
Query: 188 SYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND--EVRYPRFLSLEAIAIMR 244
YT D W G+L++E+ +G +P+PG F +V D ++ P F +IM+
Sbjct: 242 VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ 301
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 44/237 (18%)
Query: 6 YRNTGEYFAIKALKKGDIIARDE-VESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVC 64
Y+ I ALK+ + A DE + S + R + + HP +V+L +E +
Sbjct: 38 YKAKDSQGRIVALKRIRLDAEDEGIPS--TAIREISLLKELHHPNIVSLIDVIHSERCLT 95
Query: 65 FVMEYAAGGDL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIK 122
V E+ DL ++ + + + Y ++ G+ + H+ RI++R ++K
Sbjct: 96 LVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHR--------DLK 146
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-CGTPEFLAP 181
+N +NS +G +K+ADFGL + G R+ T T + AP
Sbjct: 147 ------PQNLLINS-----------DGALKLADFGLAR-AFGIPVRSYTHEVVTLWYRAP 188
Query: 182 EVLTETS-YTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSL 237
+VL + Y+ +VD W +G + EM+ G+ FPG V D+ + P+ S+
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG----------VTDDDQLPKIFSI 235
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 34/204 (16%)
Query: 36 KRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA--V 90
++ + A TMR HP +V L TE V +ME G+L + FS A +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLI 494
Query: 91 FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY 150
YA + L YL R ++R + ++ + ++ ND
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIA----------------------ARNVLVSSNDC--- 529
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTP-EFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-G 208
VK+ DFGL + + P +++APE + +T A D W GV ++E+L+ G
Sbjct: 530 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 589
Query: 209 ESPFPGDDEEEVFDSIVNDEVRYP 232
PF G +V I N E R P
Sbjct: 590 VKPFQGVKNNDVIGRIENGE-RLP 612
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY + G
Sbjct: 46 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVCEYMSKG 97
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + ++ P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 98 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 149
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 150 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 191
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY + G
Sbjct: 46 AIKTLKPGTM----SPEAFLQEA---QVMKKIRHEKLVQLYAVV-SEEPIYIVTEYMSKG 97
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + ++ P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 98 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 149
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 150 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 191
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 67/168 (39%), Gaps = 45/168 (26%)
Query: 65 FVMEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYR--PQSNITKEEI 121
V E GG ++ HIH F+E A V L +LH I +R NI E
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHP 147
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGF---GDRTG-------T 171
++ VKI DFGL G G GD + T
Sbjct: 148 NQVSP------------------------VKICDFGL---GSGIKLNGDCSPISTPELLT 180
Query: 172 FCGTPEFLAPEVLTETS-----YTRAVDWWGLGVLIFEMLVGESPFPG 214
CG+ E++APEV+ S Y + D W LGV+++ +L G PF G
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY + G
Sbjct: 212 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVGEYMSKG 263
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + + P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 315
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 316 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 357
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-ACFQTEAHVCFVM 67
T A+K LK+G E +L+SE +I + + H +VNL AC + + ++
Sbjct: 57 TCRTVAVKMLKEG--ATHSEHRALMSELKI--LIHIGHHLNVVNLLGACTKPGGPLMVIV 112
Query: 68 EYAAGGDLMMHIHA----------------DVFSEPRAVFYAACVVLGLQYLHESRIIYR 111
E+ G+L ++ + D + + Y+ V G+++L + I+R
Sbjct: 113 EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 172
Query: 112 PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--RT 169
++ I E V VKI DFGL ++ D R
Sbjct: 173 ---DLAARNILLSEKNV----------------------VKICDFGLARDIXKDPDXVRK 207
Query: 170 GTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND- 227
G +++APE + + YT D W GVL++E+ +G SP+PG +E F + +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267
Query: 228 -EVRYPRFLSLEAIAIM 243
+R P + + E M
Sbjct: 268 TRMRAPDYTTPEMYQTM 284
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 52/258 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-ACFQTEAHVCFVM 67
T A+K LK+G E +L+SE +I + + H +VNL AC + + ++
Sbjct: 47 TCRTVAVKMLKEG--ATHSEHRALMSELKI--LIHIGHHLNVVNLLGACTKPGGPLMVIV 102
Query: 68 EYAAGGDLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIY 110
E+ G+L ++ + D + + Y+ V G+++L + I+
Sbjct: 103 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 162
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--R 168
R ++ I E V VKI DFGL ++ D R
Sbjct: 163 R---DLAARNILLSEKNV----------------------VKICDFGLARDIXKDPDXVR 197
Query: 169 TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND 227
G +++APE + + YT D W GVL++E+ +G SP+PG +E F + +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
Query: 228 --EVRYPRFLSLEAIAIM 243
+R P + + E M
Sbjct: 258 GTRMRAPDYTTPEMYQTM 275
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 33/179 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHAD--VFSEPRAVFYAACVVL 98
V RH ++ LF + T+ + V ++ G L H+HA F + + A
Sbjct: 73 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH II+R ++K S I L ++T VKI DFGL
Sbjct: 132 GMDYLHAKSIIHR--------DLK--------------SNNIFLHEDNT---VKIGDFGL 166
Query: 159 CKEGMGFGDRTG--TFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGESPF 212
E + G+ ++APEV+ Y+ D + G++++E++ G+ P+
Sbjct: 167 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 38 NTGEVVAVKKLQ------HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 91
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R N+ I
Sbjct: 92 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---NLATRNI-- 146
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 147 --------------------LVENENRVKIGDFGLTK--VLPQDKEYYKVKEPGESPIFW 184
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 185 YAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 66/172 (38%), Gaps = 32/172 (18%)
Query: 46 RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHAD---VFSEPRAVFYAACV--VLGL 100
RHP LV+L + + +Y G+L H++ S C+ GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 101 QYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK 160
YLH II+R ++K I + EN+ KI DFG+ K
Sbjct: 153 HYLHTRAIIHR--------DVKSINILLDENF-----------------VPKITDFGISK 187
Query: 161 EGMGFGDR--TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+G G GT ++ PE + T D + GV++FE+L S
Sbjct: 188 KGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY + G
Sbjct: 46 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG 97
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + ++ P+ V AA + G+ Y+ ++R ++ V E
Sbjct: 98 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLAAANILVGE 149
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 150 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 191
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 44/196 (22%)
Query: 47 HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH-----------------ADVFSEPRA 89
HP ++NL + ++ +EYA G+L+ + A S +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 90 VFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG 149
+ +AA V G+ YL + + I+R N+ I V ENY
Sbjct: 142 LHFAADVARGMDYLSQKQFIHR---NLAARNI-----LVGENY----------------- 176
Query: 150 YVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VG 208
KIADFGL + + +T ++A E L + YT D W GVL++E++ +G
Sbjct: 177 VAKIADFGLSRGQEVYVKKTMGRLPV-RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 235
Query: 209 ESPFPGDDEEEVFDSI 224
+P+ G E+++ +
Sbjct: 236 GTPYCGMTCAELYEKL 251
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 52/258 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-ACFQTEAHVCFVM 67
T A+K LK+G E +L+SE +I + + H +VNL AC + + ++
Sbjct: 56 TCRTVAVKMLKEG--ATHSEHRALMSELKI--LIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Query: 68 EYAAGGDLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIY 110
E+ G+L ++ + D + + Y+ V G+++L + I+
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 171
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--R 168
R ++ I E V VKI DFGL ++ D R
Sbjct: 172 R---DLAARNILLSEKNV----------------------VKICDFGLARDIXKDPDXVR 206
Query: 169 TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND 227
G +++APE + + YT D W GVL++E+ +G SP+PG +E F + +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
Query: 228 --EVRYPRFLSLEAIAIM 243
+R P + + E M
Sbjct: 267 GTRMRAPDYTTPEMYQTM 284
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V+EY + G
Sbjct: 46 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKG 97
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + ++ P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 98 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 149
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E R G ++ APE
Sbjct: 150 NL-----------------VCKVADFGLARLIEDNEXTARQGAKFPI-KWTAPEAALYGR 191
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 52/258 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-ACFQTEAHVCFVM 67
T A+K LK+G E +L+SE +I + + H +VNL AC + + ++
Sbjct: 93 TCRTVAVKMLKEG--ATHSEHRALMSELKI--LIHIGHHLNVVNLLGACTKPGGPLMVIV 148
Query: 68 EYAAGGDLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIY 110
E+ G+L ++ + D + + Y+ V G+++L + I+
Sbjct: 149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 208
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--R 168
R ++ I E V VKI DFGL ++ D R
Sbjct: 209 R---DLAARNILLSEKNV----------------------VKICDFGLARDIYKDPDYVR 243
Query: 169 TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND 227
G +++APE + + YT D W GVL++E+ +G SP+PG +E F + +
Sbjct: 244 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 303
Query: 228 --EVRYPRFLSLEAIAIM 243
+R P + + E M
Sbjct: 304 GTRMRAPDYTTPEMYQTM 321
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 52/258 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-ACFQTEAHVCFVM 67
T A+K LK+G E +L+SE +I + + H +VNL AC + + ++
Sbjct: 58 TCRTVAVKMLKEG--ATHSEHRALMSELKI--LIHIGHHLNVVNLLGACTKPGGPLMVIV 113
Query: 68 EYAAGGDLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIY 110
E+ G+L ++ + D + + Y+ V G+++L + I+
Sbjct: 114 EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 173
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--R 168
R ++ I E V VKI DFGL ++ D R
Sbjct: 174 R---DLAARNILLSEKNV----------------------VKICDFGLARDIYKDPDYVR 208
Query: 169 TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND 227
G +++APE + + YT D W GVL++E+ +G SP+PG +E F + +
Sbjct: 209 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 268
Query: 228 --EVRYPRFLSLEAIAIM 243
+R P + + E M
Sbjct: 269 GTRMRAPDYTTPEMYQTM 286
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 40 NTGEVVAVKKLQHS------TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 93
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R ++ I
Sbjct: 94 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 148
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 149 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 186
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 52/258 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-ACFQTEAHVCFVM 67
T A+K LK+G E +L+SE +I + + H +VNL AC + + ++
Sbjct: 56 TCRTVAVKMLKEG--ATHSEHRALMSELKI--LIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Query: 68 EYAAGGDLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIY 110
E+ G+L ++ + D + + Y+ V G+++L + I+
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 171
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--R 168
R ++ I E V VKI DFGL ++ D R
Sbjct: 172 R---DLAARNILLSEKNV----------------------VKICDFGLARDIYKDPDYVR 206
Query: 169 TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND 227
G +++APE + + YT D W GVL++E+ +G SP+PG +E F + +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
Query: 228 --EVRYPRFLSLEAIAIM 243
+R P + + E M
Sbjct: 267 GTRMRAPDYTTPEMYQTM 284
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY + G
Sbjct: 46 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG 97
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + ++ P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 98 CLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 149
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 150 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 191
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 52/258 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-ACFQTEAHVCFVM 67
T A+K LK+G E +L+SE +I + + H +VNL AC + + ++
Sbjct: 56 TCRTVAVKMLKEG--ATHSEHRALMSELKI--LIHIGHHLNVVNLLGACTKPGGPLMVIV 111
Query: 68 EYAAGGDLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIY 110
E+ G+L ++ + D + + Y+ V G+++L + I+
Sbjct: 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 171
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--R 168
R ++ I E V VKI DFGL ++ D R
Sbjct: 172 R---DLAARNILLSEKNV----------------------VKICDFGLARDIYKDPDXVR 206
Query: 169 TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND 227
G +++APE + + YT D W GVL++E+ +G SP+PG +E F + +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
Query: 228 --EVRYPRFLSLEAIAIM 243
+R P + + E M
Sbjct: 267 GTRMRAPDYTTPEMYQTM 284
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 52/258 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-ACFQTEAHVCFVM 67
T A+K LK+G E +L+SE +I + + H +VNL AC + + +
Sbjct: 47 TCRTVAVKMLKEG--ATHSEHRALMSELKI--LIHIGHHLNVVNLLGACTKPGGPLMVIT 102
Query: 68 EYAAGGDLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIY 110
E+ G+L ++ + D + + Y+ V G+++L + I+
Sbjct: 103 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 162
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--R 168
R ++ I E V VKI DFGL ++ D R
Sbjct: 163 R---DLAARNILLSEKNV----------------------VKICDFGLARDIXKDPDXVR 197
Query: 169 TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND 227
G +++APE + + YT D W GVL++E+ +G SP+PG +E F + +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
Query: 228 --EVRYPRFLSLEAIAIM 243
+R P + + E M
Sbjct: 258 GTRMRAPDYTTPEMYQTM 275
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 36 NTGEVVAVKKLQHS------TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 89
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R ++ I
Sbjct: 90 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 144
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 145 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 182
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY + G
Sbjct: 36 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIXIVTEYMSKG 87
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + + P+ V AA + G+ Y+ ++R +++ V E
Sbjct: 88 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--------DLRAANILVGE 139
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E R G ++ APE
Sbjct: 140 NL-----------------VCKVADFGLARLIEDNEXTARQGAKFPI-KWTAPEAALYGR 181
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 182 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 218
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 47/217 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
+R TGE +K L + D + + L E +V + HP ++ + + F
Sbjct: 31 HRETGEVMVMKELIRFD---EETQRTFLKE---VKVMRCLEHPNVLKFIGVLYKDKRLNF 84
Query: 66 VMEYAAGGDLMMHIHADVFSEP--RAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+ EY GG L I + P + V +A + G+ YLH II+R ++
Sbjct: 85 ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR--------DLNS 136
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK------------EGMGFGDRTG- 170
V+EN V +ADFGL + + DR
Sbjct: 137 HNCLVRENKNV-----------------VVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179
Query: 171 -TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML 206
T G P ++APE++ SY VD + G+++ E++
Sbjct: 180 YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 29/178 (16%)
Query: 45 MRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH--ADVFSEPRAVFYAACVVLGLQY 102
++H +V L TE + V EY DL ++ ++ + + ++ GL Y
Sbjct: 57 LKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAY 115
Query: 103 LHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEG 162
H ++++R + K Q L +N+ G +K+ADFGL +
Sbjct: 116 CHRQKVLHR-------------DLKPQ-----------NLLINE-RGELKLADFGLARAK 150
Query: 163 MGFGDRTGTFCGTPEFLAPEVLT-ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 219
T + P++L T Y+ +D WG+G + +EM G FPG EE
Sbjct: 151 SIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 42 NTGEVVAVKKLQHS------TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 95
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R ++ I
Sbjct: 96 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 150
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 151 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 188
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 189 YAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 34/233 (14%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT- 59
V L + ++TG AIK + + E++ I + + HP +V L + F T
Sbjct: 39 VQLGKEKSTGMSVAIKKVIQDPRFRNRELQ-------IMQDLAVLHHPNIVQLQSYFYTL 91
Query: 60 ------EAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQ 113
+ ++ VMEY D + + + A V Q + ++ P
Sbjct: 92 GERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS 149
Query: 114 SNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFC 173
N+ +IK + VN+ +G +K+ DFG K+ C
Sbjct: 150 VNVCHRDIK----------------PHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC 193
Query: 174 GTPEFLAPE-VLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
+ APE + YT AVD W +G + EM++GE F GD+ IV
Sbjct: 194 SR-YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 102 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 151
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 152 ----PSNLLLNTTXDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 52/258 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-ACFQTEAHVCFVM 67
T A+K LK+G E +L+SE +I + + H +VNL AC + + +
Sbjct: 47 TCRTVAVKMLKEG--ATHSEHRALMSELKI--LIHIGHHLNVVNLLGACTKPGGPLMVIT 102
Query: 68 EYAAGGDLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIY 110
E+ G+L ++ + D + + Y+ V G+++L + I+
Sbjct: 103 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 162
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--R 168
R ++ I E V VKI DFGL ++ D R
Sbjct: 163 R---DLAARNILLSEKNV----------------------VKICDFGLARDIYKDPDYVR 197
Query: 169 TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND 227
G +++APE + + YT D W GVL++E+ +G SP+PG +E F + +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
Query: 228 --EVRYPRFLSLEAIAIM 243
+R P + + E M
Sbjct: 258 GTRMRAPDYTTPEMYQTM 275
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 43 NTGEVVAVKKLQHS------TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 96
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R ++ I
Sbjct: 97 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 151
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 152 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 189
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 190 YAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 37 NTGEVVAVKKLQHS------TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R ++ I
Sbjct: 91 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 145
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 146 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 183
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 102 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 151
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 152 ----PSNLLLNTTXDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 102 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 151
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 152 ----PSNLLLNTTXDLK-----------IXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 35 NTGEVVAVKKLQHS------TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 88
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R ++ I
Sbjct: 89 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 143
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 144 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 181
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 106 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 155
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 156 ----PSNLLLNTTXDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 52/258 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-ACFQTEAHVCFVM 67
T A+K LK+G E +L+SE +I + + H +VNL AC + + +
Sbjct: 47 TCRTVAVKMLKEG--ATHSEHRALMSELKI--LIHIGHHLNVVNLLGACTKPGGPLMVIT 102
Query: 68 EYAAGGDLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIY 110
E+ G+L ++ + D + + Y+ V G+++L + I+
Sbjct: 103 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 162
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--R 168
R ++ I E V VKI DFGL ++ D R
Sbjct: 163 R---DLAARNILLSEKNV----------------------VKICDFGLARDIYKDPDYVR 197
Query: 169 TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND 227
G +++APE + + YT D W GVL++E+ +G SP+PG +E F + +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
Query: 228 --EVRYPRFLSLEAIAIM 243
+R P + + E M
Sbjct: 258 GTRMRAPDYTTPEMYQTM 275
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 37 NTGEVVAVKKLQ------HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R ++ I
Sbjct: 91 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 145
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 146 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 183
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 44 NTGEVVAVKKLQ------HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 97
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R ++ I
Sbjct: 98 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 152
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 153 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 190
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 191 YAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 41 NTGEVVAVKKLQHS------TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 94
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R ++ I
Sbjct: 95 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 149
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 150 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 187
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 188 YAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 94/228 (41%), Gaps = 46/228 (20%)
Query: 9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACFQTEAHV-- 63
TG AIK L + +S L KR + + MRH ++ L F + +
Sbjct: 49 TGAKVAIKKLYR-------PFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101
Query: 64 ----CFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
VM + G DL + + E R F ++ GL+Y+H + II+R
Sbjct: 102 FTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHR-------- 152
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFL 179
++K N VN E+K I DFGL ++ + G T +
Sbjct: 153 DLK------PGNLAVNEDCELK-----------ILDFGLARQADS--EMXGXVV-TRWYR 192
Query: 180 APEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN 226
APEV L YT+ VD W +G ++ EM+ G++ F G D + I+
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK 240
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 68 NTGEVVAVKKLQ------HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 121
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R ++ I
Sbjct: 122 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 176
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 177 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 214
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYK 133
DL + S ++ ++ GL+Y+H + +++R ++K N
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK------PSNLL 158
Query: 134 VNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAPEV-LTETSY 189
+N++ ++K I DFGL + D TG + T + APE+ L Y
Sbjct: 159 LNTTSDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 207
Query: 190 TRAVDWWGLGVLIFEMLVGESPFPG 214
T+++D W +G ++ EML FPG
Sbjct: 208 TKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 106 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 155
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 156 ----PSNLLLNTTXDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 55 NTGEVVAVKKLQ------HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 108
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R ++ I
Sbjct: 109 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 163
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 164 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 201
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 38/206 (18%)
Query: 36 KRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA--V 90
++ + A TMR HP +V L TE V +ME G+L + +S A +
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 116
Query: 91 FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY 150
YA + L YL R ++R +I +++ + ++ ND
Sbjct: 117 LYAYQLSTALAYLESKRFVHR---DI-------------------AARNVLVSSNDC--- 151
Query: 151 VKIADFGLCK---EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
VK+ DFGL + + + G +++APE + +T A D W GV ++E+L+
Sbjct: 152 VKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEILM 209
Query: 208 -GESPFPGDDEEEVFDSIVNDEVRYP 232
G PF G +V I N E R P
Sbjct: 210 HGVKPFQGVKNNDVIGRIENGE-RLP 234
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 33/179 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHAD--VFSEPRAVFYAACVVL 98
V RH ++ LF + T + V ++ G L H+HA F + + A
Sbjct: 73 VLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH II+R ++K S I L ++T VKI DFGL
Sbjct: 132 GMDYLHAKSIIHR--------DLK--------------SNNIFLHEDNT---VKIGDFGL 166
Query: 159 CKEGMGFGDRTG--TFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGESPF 212
E + G+ ++APEV+ Y+ D + G++++E++ G+ P+
Sbjct: 167 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 55 NTGEVVAVKKLQ------HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 108
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R ++ I
Sbjct: 109 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 163
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 164 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 201
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 38/206 (18%)
Query: 36 KRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA--V 90
++ + A TMR HP +V L TE V +ME G+L + +S A +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 114
Query: 91 FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY 150
YA + L YL R ++R +I +++ + ++ ND
Sbjct: 115 LYAYQLSTALAYLESKRFVHR--------DI--------------AARNVLVSSNDC--- 149
Query: 151 VKIADFGLCK---EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
VK+ DFGL + + + G +++APE + +T A D W GV ++E+L+
Sbjct: 150 VKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
Query: 208 -GESPFPGDDEEEVFDSIVNDEVRYP 232
G PF G +V I N E R P
Sbjct: 208 HGVKPFQGVKNNDVIGRIENGE-RLP 232
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 38/206 (18%)
Query: 36 KRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA--V 90
++ + A TMR HP +V L TE V +ME G+L + +S A +
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 111
Query: 91 FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY 150
YA + L YL R ++R +I +++ + ++ ND
Sbjct: 112 LYAYQLSTALAYLESKRFVHR---DI-------------------AARNVLVSSNDC--- 146
Query: 151 VKIADFGLCK---EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
VK+ DFGL + + + G +++APE + +T A D W GV ++E+L+
Sbjct: 147 VKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEILM 204
Query: 208 -GESPFPGDDEEEVFDSIVNDEVRYP 232
G PF G +V I N E R P
Sbjct: 205 HGVKPFQGVKNNDVIGRIENGE-RLP 229
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 32/167 (19%)
Query: 53 LFACFQTEAHVCFVMEYAAGGDLMMHIHAD--VFSEPRAVFYAACVVLGLQYLHESRIIY 110
LF + T+ + V ++ G L H+HA F + + A G+ YLH II+
Sbjct: 72 LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 131
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC--KEGMGFGDR 168
R ++K S I L ++T VKI DFGL K +
Sbjct: 132 R--------DLK--------------SNNIFLHEDNT---VKIGDFGLATVKSRWSGSHQ 166
Query: 169 TGTFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGESPF 212
G+ ++APEV+ Y+ D + G++++E++ G+ P+
Sbjct: 167 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 38/206 (18%)
Query: 36 KRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA--V 90
++ + A TMR HP +V L TE V +ME G+L + +S A +
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 119
Query: 91 FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY 150
YA + L YL R ++R +I +++ + ++ ND
Sbjct: 120 LYAYQLSTALAYLESKRFVHR--------DI--------------AARNVLVSSNDC--- 154
Query: 151 VKIADFGLCK---EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
VK+ DFGL + + + G +++APE + +T A D W GV ++E+L+
Sbjct: 155 VKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEILM 212
Query: 208 -GESPFPGDDEEEVFDSIVNDEVRYP 232
G PF G +V I N E R P
Sbjct: 213 HGVKPFQGVKNNDVIGRIENGE-RLP 237
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 38/206 (18%)
Query: 36 KRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA--V 90
++ + A TMR HP +V L TE V +ME G+L + +S A +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 114
Query: 91 FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY 150
YA + L YL R ++R +I +++ + ++ ND
Sbjct: 115 LYAYQLSTALAYLESKRFVHR--------DI--------------AARNVLVSSNDC--- 149
Query: 151 VKIADFGLCK---EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
VK+ DFGL + + + G +++APE + +T A D W GV ++E+L+
Sbjct: 150 VKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
Query: 208 -GESPFPGDDEEEVFDSIVNDEVRYP 232
G PF G +V I N E R P
Sbjct: 208 HGVKPFQGVKNNDVIGRIENGE-RLP 232
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 43/227 (18%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQT 59
V+ N GE FA+K ++ E E + S R + ++H +V L+ T
Sbjct: 17 VVYKAQNNYGETFALKKIR-----LEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT 71
Query: 60 EAHVCFVMEYAAGGDL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYR---PQS 114
+ + V E+ DL ++ + A + ++ G+ Y H+ R+++R PQ+
Sbjct: 72 KKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN 130
Query: 115 NITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-C 173
L +N EG +KIADFGL + G R T
Sbjct: 131 ---------------------------LLIN-REGELKIADFGLAR-AFGIPVRKYTHEV 161
Query: 174 GTPEFLAPEVLTETS-YTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 219
T + AP+VL + Y+ +D W +G + EM+ G FPG E +
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEAD 208
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY G
Sbjct: 43 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKG 94
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + + P+ V +A + G+ Y+ ++R +++ V E
Sbjct: 95 SLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR--------DLRAANILVGE 146
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 147 NL-----------------VCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGR 188
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 38/206 (18%)
Query: 36 KRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA--V 90
++ + A TMR HP +V L TE V +ME G+L + +S A +
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 117
Query: 91 FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY 150
YA + L YL R ++R +I +++ + ++ ND
Sbjct: 118 LYAYQLSTALAYLESKRFVHR---DI-------------------AARNVLVSSNDC--- 152
Query: 151 VKIADFGLCK---EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
VK+ DFGL + + + G +++APE + +T A D W GV ++E+L+
Sbjct: 153 VKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEILM 210
Query: 208 -GESPFPGDDEEEVFDSIVNDEVRYP 232
G PF G +V I N E R P
Sbjct: 211 HGVKPFQGVKNNDVIGRIENGE-RLP 235
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 38/206 (18%)
Query: 36 KRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA--V 90
++ + A TMR HP +V L TE V +ME G+L + +S A +
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 142
Query: 91 FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY 150
YA + L YL R ++R +I +++ + ++ ND
Sbjct: 143 LYAYQLSTALAYLESKRFVHR--------DI--------------AARNVLVSSNDC--- 177
Query: 151 VKIADFGLCK---EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
VK+ DFGL + + + G +++APE + +T A D W GV ++E+L+
Sbjct: 178 VKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEILM 235
Query: 208 -GESPFPGDDEEEVFDSIVNDEVRYP 232
G PF G +V I N E R P
Sbjct: 236 HGVKPFQGVKNNDVIGRIENGE-RLP 260
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 43/227 (18%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQT 59
V+ N GE FA+K ++ E E + S R + ++H +V L+ T
Sbjct: 17 VVYKAQNNYGETFALKKIR-----LEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT 71
Query: 60 EAHVCFVMEYAAGGDL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYR---PQS 114
+ + V E+ DL ++ + A + ++ G+ Y H+ R+++R PQ+
Sbjct: 72 KKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN 130
Query: 115 NITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-C 173
L +N EG +KIADFGL + G R T
Sbjct: 131 ---------------------------LLIN-REGELKIADFGLAR-AFGIPVRKYTHEV 161
Query: 174 GTPEFLAPEVLTETS-YTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 219
T + AP+VL + Y+ +D W +G + EM+ G FPG E +
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 60/238 (25%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + E+ LLSE F V + HP ++ L+ + + ++EYA G
Sbjct: 57 AVKMLKEN--ASPSELRDLLSE---FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
Query: 74 DL-------------------------MMHIHADVFSEPRAVFYAACVVLGLQYLHESRI 108
L + H + + +A + G+QYL E ++
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKL 171
Query: 109 IYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK---EGMGF 165
++R ++ I E + +KI+DFGL + E +
Sbjct: 172 VHR---DLAARNILVAEGR----------------------KMKISDFGLSRDVYEEDSY 206
Query: 166 GDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFD 222
R+ +++A E L + YT D W GVL++E++ +G +P+PG E +F+
Sbjct: 207 VKRSQGRIPV-KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN 263
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 43/227 (18%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEK-RIFEVANTMRHPFLVNLFACFQT 59
V+ N GE FA+K ++ E E + S R + ++H +V L+ T
Sbjct: 17 VVYKAQNNYGETFALKKIR-----LEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT 71
Query: 60 EAHVCFVMEYAAGGDL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYR---PQS 114
+ + V E+ DL ++ + A + ++ G+ Y H+ R+++R PQ+
Sbjct: 72 KKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN 130
Query: 115 NITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF-C 173
L +N EG +KIADFGL + G R T
Sbjct: 131 ---------------------------LLIN-REGELKIADFGLAR-AFGIPVRKYTHEI 161
Query: 174 GTPEFLAPEVLTETS-YTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 219
T + AP+VL + Y+ +D W +G + EM+ G FPG E +
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 94/245 (38%), Gaps = 57/245 (23%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ--TEAHVC 64
R TGE A+K + ++ ++ + + I + H +VNL + + V
Sbjct: 31 RRTGEVVAVKKIFDA---FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQ--SNITKEEIK 122
V +Y DL I A++ + ++ ++YLH +++R SNI
Sbjct: 88 LVFDYMET-DLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNI------ 140
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE-----------GMGFGDRTGT 171
+ + E +VK+ADFGL + + + T
Sbjct: 141 ---------------------LLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 172 F----------CGTPEFLAPEVLT-ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEV 220
F T + APE+L T YT+ +D W LG ++ E+L G+ FPG
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
Query: 221 FDSIV 225
+ I+
Sbjct: 240 LERII 244
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 34/204 (16%)
Query: 36 KRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA--V 90
++ + A TMR HP +V L TE V +ME G+L + FS A +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLI 494
Query: 91 FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY 150
YA + L YL R ++R +I +++ + ++ D
Sbjct: 495 LYAYQLSTALAYLESKRFVHR---DI-------------------AARNVLVSATDC--- 529
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTP-EFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-G 208
VK+ DFGL + + P +++APE + +T A D W GV ++E+L+ G
Sbjct: 530 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 589
Query: 209 ESPFPGDDEEEVFDSIVNDEVRYP 232
PF G +V I N E R P
Sbjct: 590 VKPFQGVKNNDVIGRIENGE-RLP 612
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 96/223 (43%), Gaps = 29/223 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V + ++ TGE AIK ++ D + L R ++ +H ++ +F + +
Sbjct: 27 VCSATHKPTGEIVAIKKIEPFD-----KPLFALRTLREIKILKHFKHENIITIFNIQRPD 81
Query: 61 A----HVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNI 116
+ + ++++ DL I + S+ ++ + ++ LH S +I+R
Sbjct: 82 SFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR----- 136
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGT--FCG 174
++K N +NS+ ++K+ G +I D G ++G F
Sbjct: 137 ---DLK------PSNLLINSNCDLKVC---DFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 175 TPEFLAPEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
T + APEV LT Y+RA+D W G ++ E+ + FPG D
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 58/237 (24%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + E+ LLSE F V + HP ++ L+ + + ++EYA G
Sbjct: 57 AVKMLKEN--ASPSELRDLLSE---FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
Query: 74 DL-------------------------MMHIHADVFSEPRAVFYAACVVLGLQYLHESRI 108
L + H + + +A + G+QYL E ++
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKL 171
Query: 109 IYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDR 168
++R ++ I E + +KI+DFGL ++
Sbjct: 172 VHR---DLAARNILVAEGR----------------------KMKISDFGLSRDVYEEDSX 206
Query: 169 TGTFCG--TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFD 222
G +++A E L + YT D W GVL++E++ +G +P+PG E +F+
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN 263
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 40/217 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + E+ L E +V +RH LV L+A +E + V EY G
Sbjct: 43 AIKTLKPGTM----SPEAFLQEA---QVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKG 94
Query: 74 DLMMHIHADV---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
L+ + + P+ V +A + G+ Y+ ++R +++ V E
Sbjct: 95 SLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR--------DLRAANILVGE 146
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTPEFLAPEVLTETS 188
N K+ADFGL + E + R G ++ APE
Sbjct: 147 NL-----------------VCKVADFGLARLIEDNEWTARQGAKFPI-KWTAPEAALYGR 188
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
+T D W G+L+ E+ G P+PG EV D +
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 102 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 151
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 152 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 90/223 (40%), Gaps = 41/223 (18%)
Query: 11 EYFAIKALKKGDIIARDEVESL--LSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVME 68
++ A+K ++ R E + L R + NTM ++++ F H+C E
Sbjct: 123 QHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMN---VIHMLENFTFRNHICMTFE 179
Query: 69 YAAGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIY---RPQSNITKEEIKR 123
+ +L+ FS P +A ++ L LH++RII+ +P++ + K++
Sbjct: 180 LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ--- 236
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL-CKEGMGFGDRTGTFCGTPEFLAPE 182
+K+ DFG C E R T + + APE
Sbjct: 237 -----------------------GRSGIKVIDFGSSCYEH----QRVYTXIQSRFYRAPE 269
Query: 183 VLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
V+ Y +D W LG ++ E+L G PG+DE + ++
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 31/245 (12%)
Query: 14 AIKALK-KGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAG 72
A+K LK K D E E+L+SE ++ + H +VNL + + EY
Sbjct: 79 AVKMLKEKAD---SSEREALMSELKM--MTQLGSHENIVNLLGACTLSGPIYLIFEYCCY 133
Query: 73 GDLMMHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNI-TKEEIKRIE---A 126
GDL+ ++ + + FSE ++Y ++ R+ N+ T E++ A
Sbjct: 134 GDLLNYLRSKREKFSEDE-----------IEYENQKRLEEEEDLNVLTFEDLLCFAYQVA 182
Query: 127 KVQENYKVNSSQEIKLTVND---TEG-YVKIADFGLCKEGMGFGDRT--GTFCGTPEFLA 180
K E + S L + T G VKI DFGL ++ M + G +++A
Sbjct: 183 KGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMA 242
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEVRYPR-FLSLE 238
PE L E YT D W G+L++E+ +G +P+PG + F ++ + + + F + E
Sbjct: 243 PESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATE 302
Query: 239 AIAIM 243
I I+
Sbjct: 303 EIYII 307
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 35/220 (15%)
Query: 11 EYFAIKALKKGDIIARDEVESL--LSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVME 68
++ A+K ++ R E + L R + NTM ++++ F H+C E
Sbjct: 123 QHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMN---VIHMLENFTFRNHICMTFE 179
Query: 69 YAAGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
+ +L+ FS P +A ++ L LH++RII+ ++ E I
Sbjct: 180 LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH---CDLKPENI----- 231
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGL-CKEGMGFGDRTGTFCGTPEFLAPEVLT 185
L +K+ DFG C E R T + + APEV+
Sbjct: 232 ---------------LLKQQGRSGIKVIDFGSSCYEH----QRVYTXIQSRFYRAPEVIL 272
Query: 186 ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
Y +D W LG ++ E+L G PG+DE + ++
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 34/177 (19%)
Query: 54 FACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYR 111
F + E ++ ++ +EY +GG+L I D+ EP A + ++ G+ YLH I +R
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 112 PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRT-- 169
+I E + + D +KI+DFGL + +R
Sbjct: 129 ---DIKPENL----------------------LLDERDNLKISDFGLATV-FRYNNRERL 162
Query: 170 -GTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF--PGDDEEEVFD 222
GT ++APE+L + VD W G+++ ML GE P+ P D +E D
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSD 219
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 39/206 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK+G + + E ++ E +I + + +P++V L Q EA + VME A GG
Sbjct: 367 AIKVLKQG--TEKADTEEMMREAQIM---HQLDNPYIVRLIGVCQAEA-LMLVMEMAGGG 420
Query: 74 DLMMHIHADVFSEPRAVFYAAC--VVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L + P + V +G++YL E ++R N+ +
Sbjct: 421 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR---NLAARNV---------- 467
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDR--TGTFCGT-P-EFLAPEVLTET 187
L VN Y KI+DFGL K +G D T G P ++ APE +
Sbjct: 468 ----------LLVN--RHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 188 SYTRAVDWWGLGVLIFEML-VGESPF 212
++ D W GV ++E L G+ P+
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQKPY 540
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 107 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 156
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 157 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 108 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 157
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 158 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 236
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 99 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 148
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 149 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 227
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 106 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 155
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 156 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 106 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 155
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 156 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 93/222 (41%), Gaps = 24/222 (10%)
Query: 6 YRNTGEYFAIKALKKGDI---IARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH 62
++ G + A+K +K D AR E++ +L + +T R V + F+ H
Sbjct: 36 HKAGGRHVAVKIVKNVDRYCEAARSEIQ-VLEHLNTTDPNSTFR---CVQMLEWFEHHGH 91
Query: 63 VCFVMEYAAGGDLMMHIHADVF-----SEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
+C V E G I + F R + Y C + +LH +++ + +++
Sbjct: 92 ICIVFE-LLGLSTYDFIKENGFLPFRLDHIRKMAYQICK--SVNFLHSNKLTH---TDLK 145
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
E I +++ E Y ++ + +N +K+ DFG + T
Sbjct: 146 PENILFVQSDYTEAYNPKIKRDERTLINPD---IKVVDFG---SATYDDEHHSTLVXXRH 199
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 219
+ APEV+ +++ D W +G ++ E +G + FP D +E
Sbjct: 200 YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 100 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 149
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 150 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 110 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 159
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 160 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 238
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 102 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 151
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 152 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 38/206 (18%)
Query: 36 KRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA--V 90
++ + A TMR HP +V L TE V +ME G+L + FS A +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLI 114
Query: 91 FYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY 150
YA + L YL R ++R +I +++ + ++ D
Sbjct: 115 LYAYQLSTALAYLESKRFVHR---DI-------------------AARNVLVSATDC--- 149
Query: 151 VKIADFGLCK---EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
VK+ DFGL + + + G +++APE + +T A D W GV ++E+L+
Sbjct: 150 VKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
Query: 208 -GESPFPGDDEEEVFDSIVNDEVRYP 232
G PF G +V I N E R P
Sbjct: 208 HGVKPFQGVKNNDVIGRIENGE-RLP 232
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 34/173 (19%)
Query: 46 RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHAD---VFSEPRAVFYAACV--VLGL 100
RHP LV+L + + +Y G+L H++ S C+ GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 101 QYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK 160
YLH II+R ++K I + EN+ KI DFG+ K
Sbjct: 153 HYLHTRAIIHR--------DVKSINILLDENF-----------------VPKITDFGISK 187
Query: 161 EGMGFGDRT---GTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+G D+T GT ++ PE + T D + GV++FE+L S
Sbjct: 188 KGTEL-DQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 44/196 (22%)
Query: 47 HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH-----------------ADVFSEPRA 89
HP ++NL + ++ +EYA G+L+ + A S +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 90 VFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG 149
+ +AA V G+ YL + + I+R ++ V ENY
Sbjct: 135 LHFAADVARGMDYLSQKQFIHR--------DLAARNILVGENY----------------- 169
Query: 150 YVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VG 208
KIADFGL + + +T ++A E L + YT D W GVL++E++ +G
Sbjct: 170 VAKIADFGLSRGQEVYVKKTMGRLPV-RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 228
Query: 209 ESPFPGDDEEEVFDSI 224
+P+ G E+++ +
Sbjct: 229 GTPYCGMTCAELYEKL 244
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 104 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 153
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 154 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 100 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 149
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 150 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 106 YIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 155
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 156 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 47/220 (21%)
Query: 7 RNTGEYFAIKALKK---GDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHV 63
+ +GE AIK L + +I A+ LL K M+H ++ L F + +
Sbjct: 46 KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH-------MQHENVIGLLDVFTPASSL 98
Query: 64 ------CFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
VM + + I FSE + + ++ GL+Y+H + +++R
Sbjct: 99 RNFYDFYLVMPFMQTD--LQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHR------ 150
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
++K N VN E+K I DFGL + + TG + T
Sbjct: 151 --DLK------PGNLAVNEDCELK-----------ILDFGLARHADA--EMTG-YVVTRW 188
Query: 178 FLAPEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
+ APEV L+ Y + VD W +G ++ EML G++ F G D
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 45/210 (21%)
Query: 16 KALKKGDIIARDEVESLLSEKRIFEVA----NTMRHPFLVNLF-ACFQTEAHVCFVMEYA 70
KA + +A ++ES SE++ F V + + HP +V L+ AC VC VMEYA
Sbjct: 27 KAKWRAKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLNP---VCLVMEYA 82
Query: 71 AGGDLMMHIHADVFSEPRAVFYAA-----CVVL--GLQYLHESRIIYRPQSNITKEEIKR 123
GG L +H +EP + AA C+ G+ YLH +P++ I ++
Sbjct: 83 EGGSLYNVLHG---AEPLPYYTAAHAMSWCLQCSQGVAYLHS----MQPKALIHRDL--- 132
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL-CKEGMGFGDRTGTFCGTPEFLAPE 182
+ L T +KI DFG C + G+ ++APE
Sbjct: 133 ------------KPPNLLLVAGGT--VLKICDFGTACDIQTHMTNNKGSAA----WMAPE 174
Query: 183 VLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
V ++Y+ D + G++++E++ PF
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 45/210 (21%)
Query: 16 KALKKGDIIARDEVESLLSEKRIFEVA----NTMRHPFLVNLF-ACFQTEAHVCFVMEYA 70
KA + +A ++ES SE++ F V + + HP +V L+ AC VC VMEYA
Sbjct: 26 KAKWRAKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLNP---VCLVMEYA 81
Query: 71 AGGDLMMHIHADVFSEPRAVFYAA-----CVVL--GLQYLHESRIIYRPQSNITKEEIKR 123
GG L +H +EP + AA C+ G+ YLH +P++ I ++
Sbjct: 82 EGGSLYNVLHG---AEPLPYYTAAHAMSWCLQCSQGVAYLHS----MQPKALIHRDL--- 131
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL-CKEGMGFGDRTGTFCGTPEFLAPE 182
+ L T +KI DFG C + G+ ++APE
Sbjct: 132 ------------KPPNLLLVAGGT--VLKICDFGTACDIQTHMTNNKGSAA----WMAPE 173
Query: 183 VLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
V ++Y+ D + G++++E++ PF
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 104 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 153
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 154 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 44/196 (22%)
Query: 47 HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH-----------------ADVFSEPRA 89
HP ++NL + ++ +EYA G+L+ + A S +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 90 VFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG 149
+ +AA V G+ YL + + I+R ++ V ENY
Sbjct: 145 LHFAADVARGMDYLSQKQFIHR--------DLAARNILVGENY----------------- 179
Query: 150 YVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VG 208
KIADFGL + + +T ++A E L + YT D W GVL++E++ +G
Sbjct: 180 VAKIADFGLSRGQEVYVKKTMGRLPV-RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 238
Query: 209 ESPFPGDDEEEVFDSI 224
+P+ G E+++ +
Sbjct: 239 GTPYCGMTCAELYEKL 254
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 42/209 (20%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 40 NTGEVVAVKKLQHST------EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 93
Query: 66 VMEYAAGGDLMMHI--HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+ME+ G L ++ H + + + Y + + G++YL R I+R ++ I
Sbjct: 94 IMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 148
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE-----F 178
+ + E VKI DFGL K + D+ P +
Sbjct: 149 --------------------LVENENRVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFW 186
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
APE LTE+ ++ A D W GV+++E+
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 35/195 (17%)
Query: 36 KRIFEVANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYA 93
K+ + + H +V + + E ++ ++ +EY +GG+L I D+ EP A +
Sbjct: 53 KKEIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 94 ACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKI 153
++ G+ YLH I +R +I E + + D +KI
Sbjct: 112 HQLMAGVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKI 146
Query: 154 ADFGLCKEGMGFGDRT---GTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGE 209
+DFGL + +R GT ++APE+L + VD W G+++ ML GE
Sbjct: 147 SDFGLATV-FRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 210 SPF--PGDDEEEVFD 222
P+ P D +E D
Sbjct: 206 LPWDQPSDSCQEYSD 220
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 122 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 171
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG---TFCGTPEFLAP 181
N +N++ ++K I DFGL + D TG + T + AP
Sbjct: 172 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 35/195 (17%)
Query: 36 KRIFEVANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYA 93
K+ + + H +V + + E ++ ++ +EY +GG+L I D+ EP A +
Sbjct: 52 KKEIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 94 ACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKI 153
++ G+ YLH I +R +I E + + D +KI
Sbjct: 111 HQLMAGVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKI 145
Query: 154 ADFGLCKEGMGFGDRT---GTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGE 209
+DFGL + +R GT ++APE+L + VD W G+++ ML GE
Sbjct: 146 SDFGLATV-FRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 210 SPF--PGDDEEEVFD 222
P+ P D +E D
Sbjct: 205 LPWDQPSDSCQEYSD 219
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 40/251 (15%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK DE E+L+SE +I +++ +H +VNL V + EY G
Sbjct: 65 AVKMLK--STAHADEKEALMSELKI--MSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 120
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYK 133
DL+ + A +LG S + + KE+ + +E + ++
Sbjct: 121 DLLNFLRRK-----------AEAMLG-----PSLAPGQDPEGLDKEDGRPLELRDLLHFS 164
Query: 134 VNSSQEIKLTVND--------------TEGYV-KIADFGLCKEGMGFGDR--TGTFCGTP 176
+Q + + T G+V KI DFGL ++ M + G
Sbjct: 165 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 224
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND--EVRYPR 233
+++APE + + YT D W G+L++E+ +G +P+PG F +V D ++ P
Sbjct: 225 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 284
Query: 234 FLSLEAIAIMR 244
F +IM+
Sbjct: 285 FAPKNIYSIMQ 295
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 46/211 (21%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQT-EAHVCF 65
NTGE A+K L+ E L +R E+ +++H +V C+ ++
Sbjct: 37 NTGEVVAVKKLQ------HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90
Query: 66 VMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
+MEY G L + H + + + Y + + G++YL R I+R ++ I
Sbjct: 91 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI-- 145
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE------ 177
+ + E VKI DFGL K + F E
Sbjct: 146 --------------------LVENENRVKIGDFGLTK----VLPQDKEFFKVKEPGESPI 181
Query: 178 -FLAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
+ APE LTE+ ++ A D W GV+++E+
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 47/220 (21%)
Query: 7 RNTGEYFAIKALKK---GDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHV 63
+ +GE AIK L + +I A+ LL K M+H ++ L F + +
Sbjct: 64 KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH-------MQHENVIGLLDVFTPASSL 116
Query: 64 ------CFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
VM + + I FSE + + ++ GL+Y+H + +++R
Sbjct: 117 RNFYDFYLVMPFMQTD--LQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHR------ 168
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE 177
++K N VN E+K I DFGL + + TG + T
Sbjct: 169 --DLK------PGNLAVNEDCELK-----------ILDFGLARHADA--EMTG-YVVTRW 206
Query: 178 FLAPEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
+ APEV L+ Y + VD W +G ++ EML G++ F G D
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 246
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 66/168 (39%), Gaps = 45/168 (26%)
Query: 65 FVMEYAAGGDLMMHIHADV-FSEPRAVFYAACVVLGLQYLHESRIIYR--PQSNITKEEI 121
V E GG ++ HIH F+E A V L +LH I +R NI E
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHP 147
Query: 122 KRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGF---GDRTG-------T 171
++ VKI DF L G G GD + T
Sbjct: 148 NQVSP------------------------VKICDFDL---GSGIKLNGDCSPISTPELLT 180
Query: 172 FCGTPEFLAPEVLTETS-----YTRAVDWWGLGVLIFEMLVGESPFPG 214
CG+ E++APEV+ S Y + D W LGV+++ +L G PF G
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 94/237 (39%), Gaps = 58/237 (24%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK+ + E+ LLSE F V + HP ++ L+ + + ++EYA G
Sbjct: 57 AVKMLKEN--ASPSELRDLLSE---FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
Query: 74 DL-------------------------MMHIHADVFSEPRAVFYAACVVLGLQYLHESRI 108
L + H + + +A + G+QYL E +
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSL 171
Query: 109 IYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDR 168
++R ++ I E + +KI+DFGL ++
Sbjct: 172 VHR---DLAARNILVAEGR----------------------KMKISDFGLSRDVYEEDSX 206
Query: 169 TGTFCG--TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFD 222
G +++A E L + YT D W GVL++E++ +G +P+PG E +F+
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN 263
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 29/223 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V + ++ TGE AIK ++ D + L R ++ +H ++ +F + +
Sbjct: 27 VCSATHKPTGEIVAIKKIEPFD-----KPLFALRTLREIKILKHFKHENIITIFNIQRPD 81
Query: 61 A----HVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNI 116
+ + ++++ DL I + S+ ++ + ++ LH S +I+R
Sbjct: 82 SFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR----- 136
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGT--FCG 174
++K N +NS+ ++K+ G +I D G ++G +
Sbjct: 137 ---DLK------PSNLLINSNCDLKVC---DFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 175 TPEFLAPEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
T + APEV LT Y+RA+D W G ++ E+ + FPG D
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 29 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 80
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 81 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 129
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + + V+DT KIADFGL + E + R G
Sbjct: 130 ------------------NLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPI 170
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 171 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 219
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYK 133
DL + + S ++ ++ GL+Y+H + +++R ++K N
Sbjct: 131 DLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK------PSNLL 176
Query: 134 VNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFC---GTPEFLAPEV-LTETSY 189
+N++ ++K I DFGL + D TG T + APE+ L Y
Sbjct: 177 INTTCDLK-----------ICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGY 225
Query: 190 TRAVDWWGLGVLIFEMLVGESPFPG 214
T+++D W +G ++ EML FPG
Sbjct: 226 TKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 31/203 (15%)
Query: 15 IKALKKGDIIARDEVESLLSEKRIFEVANTMR--HPFLVNLFACFQTEAHVCFVME-YAA 71
+K +KK ++ +E K E+A R H ++ + F+ + VME + +
Sbjct: 54 VKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGS 113
Query: 72 GGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
G DL I EP A + +V + YL II+R +IK + E
Sbjct: 114 GLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHR--------DIKDENIVIAE 165
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYT 190
++ + K+ DFG + G TFCGT E+ APEVL Y
Sbjct: 166 DFTI-----------------KLIDFG-SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYR 207
Query: 191 RA-VDWWGLGVLIFEMLVGESPF 212
++ W LGV ++ ++ E+PF
Sbjct: 208 GPELEMWSLGVTLYTLVFEENPF 230
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 42/224 (18%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
N AIK LK G + ES L E +I + ++H LV L+A +E + V
Sbjct: 31 NGNTKVAIKTLKPGTM----SPESFLEEAQIMK---KLKHDKLVQLYAVV-SEEPIYIVT 82
Query: 68 EYAAGGDLMMHI---HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
EY G L+ + P V AA V G+ Y+ I+R
Sbjct: 83 EYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHR------------- 129
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYV-KIADFGLCK--EGMGFGDRTGTFCGTPEFLAP 181
+ + V + G + KIADFGL + E R G ++ AP
Sbjct: 130 -----------DLRSANILVGN--GLICKIADFGLARLIEDNEXTARQGAKFPI-KWTAP 175
Query: 182 EVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
E +T D W G+L+ E++ G P+PG + EV + +
Sbjct: 176 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV 219
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 57 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 116 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 150
Query: 159 CKEGMGFGDRT---GTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R GT ++APE+L + VD W G+++ ML GE P+
Sbjct: 151 ATV-FRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 210 PSDSCQEYSD 219
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 28 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 79
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 80 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 128
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + V+DT KIADFGL + E + R G
Sbjct: 129 ------------------DLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPI 169
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 170 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 218
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 30/140 (21%)
Query: 88 RAVFYAACVVLGLQYLHESRIIYR--PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN 145
R + +++G+++LH + II+R SNI V
Sbjct: 127 RMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI---------------------------VV 159
Query: 146 DTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM 205
++ +KI DFGL + G + T + APEV+ Y VD W +GV++ EM
Sbjct: 160 KSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 206 LVGESPFPGDDEEEVFDSIV 225
+ G FPG D + ++ ++
Sbjct: 219 IKGGVLFPGTDHIDQWNKVI 238
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 39/206 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK+G + + E ++ E +I + + +P++V L Q EA + VME A GG
Sbjct: 41 AIKVLKQG--TEKADTEEMMREAQIM---HQLDNPYIVRLIGVCQAEA-LMLVMEMAGGG 94
Query: 74 DLMMHIHADVFSEPRAVFYAAC--VVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L + P + V +G++YL E ++R ++ +
Sbjct: 95 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR---DLAARNV---------- 141
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDR--TGTFCGT-P-EFLAPEVLTET 187
L VN Y KI+DFGL K +G D T G P ++ APE +
Sbjct: 142 ----------LLVN--RHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 188 SYTRAVDWWGLGVLIFEML-VGESPF 212
++ D W GV ++E L G+ P+
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 106 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 155
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF---CGTPEFLAP 181
N +N++ ++K I DFGL + D TG T + AP
Sbjct: 156 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 43 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 94
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 95 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 143
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + V+DT KIADFGL + E + R G
Sbjct: 144 ------------------DLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPI 184
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 185 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 233
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 29/154 (18%)
Query: 65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRI 124
++++ DL + S ++ ++ GL+Y+H + +++R ++K
Sbjct: 107 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR--------DLK-- 156
Query: 125 EAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF---CGTPEFLAP 181
N +N++ ++K I DFGL + D TG T + AP
Sbjct: 157 ----PSNLLLNTTCDLK-----------ICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 182 EV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPG 214
E+ L YT+++D W +G ++ EML FPG
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 30/140 (21%)
Query: 88 RAVFYAACVVLGLQYLHESRIIYR--PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN 145
R + +++G+++LH + II+R SNI V
Sbjct: 127 RMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI---------------------------VV 159
Query: 146 DTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM 205
++ +KI DFGL + G + T + APEV+ Y VD W +GV++ EM
Sbjct: 160 KSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 206 LVGESPFPGDDEEEVFDSIV 225
+ G FPG D + ++ ++
Sbjct: 219 IKGGVLFPGTDHIDQWNKVI 238
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 35/190 (18%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFV-MEYAAGGDLMMHIHADV-FSEPRAVFYAACVVL 98
+ + H +V + + E ++ ++ +EY +GG+L I D+ EP A + ++
Sbjct: 57 INKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YLH I +R +I E + + D +KI+DFGL
Sbjct: 116 GVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGL 150
Query: 159 CKEGMGFGDR---TGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPF-- 212
+ +R GT ++APE+L + VD W G+++ ML GE P+
Sbjct: 151 ATV-FRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
Query: 213 PGDDEEEVFD 222
P D +E D
Sbjct: 210 PSDSCQEYSD 219
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 39 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 90
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 91 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 139
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + V+DT KIADFGL + E + R G
Sbjct: 140 ------------------DLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPI 180
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 181 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 93/227 (40%), Gaps = 62/227 (27%)
Query: 10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF------------ 57
Y+AIK ++ + +++ ++LSE + ++ H ++V +A +
Sbjct: 31 SRYYAIKKIRHTE----EKLSTILSEVMLLA---SLNHQYVVRYYAAWLERRNFVKPMTA 83
Query: 58 -QTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYA--ACVVLGLQYLHESRIIYRPQS 114
+ ++ + MEY G L IH++ ++ R ++ ++ L Y+H II+R
Sbjct: 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHR--- 140
Query: 115 NITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGM----------- 163
++K + + E+ V KI DFGL K
Sbjct: 141 -----DLKPMNIFIDESRNV-----------------KIGDFGLAKNVHRSLDILKLDSQ 178
Query: 164 ---GFGDRTGTFCGTPEFLAPEVLTETS-YTRAVDWWGLGVLIFEML 206
G D + GT ++A EVL T Y +D + LG++ FEM+
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 38 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 89
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 90 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 138
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + V+DT KIADFGL + E + R G
Sbjct: 139 ------------------DLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPI 179
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 180 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 228
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 29/218 (13%)
Query: 11 EYFAIKALK-KGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEY 69
E+ AIK +K K + + ++E L E + +T ++V+L F H+C V E
Sbjct: 80 EWVAIKIIKNKKAFLNQAQIEVRLLE--LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM 137
Query: 70 AAGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAK 127
+ DL+ + + S +A + L +L P+ +I ++K
Sbjct: 138 LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT------PELSIIHCDLK----- 186
Query: 128 VQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET 187
E L N +KI DFG G R + + +PEVL
Sbjct: 187 ----------PENILLCNPKRSAIKIVDFG---SSCQLGQRIYQXIQSRFYRSPEVLLGM 233
Query: 188 SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
Y A+D W LG ++ EM GE F G +E + + IV
Sbjct: 234 PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 40/211 (18%)
Query: 12 YFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYA 70
+ A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 59 HCAVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYM 113
Query: 71 AGGDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
GDL I + + + + V G++YL + ++R ++ +
Sbjct: 114 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR--------DLAARNCML 165
Query: 129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEV 183
E + V K+ADFGL KE ++TG +++A E
Sbjct: 166 DEKFTV-----------------KVADFGLARDMYDKEXXSVHNKTGAKLPV-KWMALES 207
Query: 184 LTETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
L +T D W GVL++E++ G P+P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 33 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 84
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 85 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 133
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + V+DT KIADFGL + E + R G
Sbjct: 134 ------------------DLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPI 174
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 175 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 81/206 (39%), Gaps = 37/206 (17%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE--AHVCF 65
TGE A+KALK A + K+ ++ T+ H ++ C + A +
Sbjct: 58 GTGEMVAVKALK-----ADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
VMEY G L ++ + + +A + G+ YLH I+R ++ +
Sbjct: 113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHR---DLAARNV---- 165
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK---EGMGFGDRTGTFCGTPEFL-AP 181
+ D + VKI DFGL K EG R +P F AP
Sbjct: 166 ------------------LLDNDRLVKIGDFGLAKAVPEGHEX-YRVREDGDSPVFWYAP 206
Query: 182 EVLTETSYTRAVDWWGLGVLIFEMLV 207
E L E + A D W GV ++E+L
Sbjct: 207 ECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 29/218 (13%)
Query: 11 EYFAIKALK-KGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEY 69
E+ AIK +K K + + ++E L E + +T ++V+L F H+C V E
Sbjct: 61 EWVAIKIIKNKKAFLNQAQIEVRLLE--LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM 118
Query: 70 AAGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAK 127
+ DL+ + + S +A + L +L P+ +I ++K
Sbjct: 119 LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT------PELSIIHCDLK----- 167
Query: 128 VQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET 187
E L N +KI DFG G R + + +PEVL
Sbjct: 168 ----------PENILLCNPKRSAIKIVDFG---SSCQLGQRIYQXIQSRFYRSPEVLLGM 214
Query: 188 SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
Y A+D W LG ++ EM GE F G +E + + IV
Sbjct: 215 PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 51/222 (22%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF-QT 59
V+L YR G A+K +K D A ++ L+E V +RH LV L +
Sbjct: 28 VMLGDYR--GNKVAVKCIKN-DATA----QAFLAEA---SVMTQLRHSNLVQLLGVIVEE 77
Query: 60 EAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAAC-------VVLGLQYLHESRIIYRP 112
+ + V EY A G L+ ++ S R+V C V ++YL + ++R
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLR----SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR- 132
Query: 113 QSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF 172
++ + E V K++DFGL KE D TG
Sbjct: 133 --DLAARNVLVSEDNV----------------------AKVSDFGLTKEASSTQD-TGKL 167
Query: 173 CGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFP 213
++ APE L E +++ D W G+L++E+ G P+P
Sbjct: 168 --PVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYP 207
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 29/218 (13%)
Query: 11 EYFAIKALK-KGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEY 69
E+ AIK +K K + + ++E L E + +T ++V+L F H+C V E
Sbjct: 80 EWVAIKIIKNKKAFLNQAQIEVRLLE--LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM 137
Query: 70 AAGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAK 127
+ DL+ + + S +A + L +L P+ +I ++K
Sbjct: 138 LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT------PELSIIHCDLK----- 186
Query: 128 VQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET 187
E L N +KI DFG G R + + +PEVL
Sbjct: 187 ----------PENILLCNPKRXAIKIVDFG---SSCQLGQRIYQXIQSRFYRSPEVLLGM 233
Query: 188 SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
Y A+D W LG ++ EM GE F G +E + + IV
Sbjct: 234 PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 48/224 (21%)
Query: 31 SLLSEKRIFEVANTMRHPFLVNLF-ACFQT----EAHVCFVMEYAAGGDLMMHIHADVFS 85
S + E + T HP +V LF C + E + V E+ D + + D
Sbjct: 57 STIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV---DQDLTTYLDKVP 113
Query: 86 EP-------RAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQ 138
EP + + + ++ GL +LH R+++R ++K +N V SS
Sbjct: 114 EPGVPTETIKDMMFQ--LLRGLDFLHSHRVVHR--------DLK------PQNILVTSS- 156
Query: 139 EIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGL 198
G +K+ADFGL + F + T + APEVL ++SY VD W +
Sbjct: 157 ----------GQIKLADFGLARI-YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 205
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVN-----DEVRYPRFLSL 237
G + EM + F G + + I++ E +PR ++L
Sbjct: 206 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 48/224 (21%)
Query: 31 SLLSEKRIFEVANTMRHPFLVNLF-ACFQT----EAHVCFVMEYAAGGDLMMHIHADVFS 85
S + E + T HP +V LF C + E + V E+ D + + D
Sbjct: 57 STIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV---DQDLTTYLDKVP 113
Query: 86 EP-------RAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQ 138
EP + + + ++ GL +LH R+++R ++K +N V SS
Sbjct: 114 EPGVPTETIKDMMFQ--LLRGLDFLHSHRVVHR--------DLK------PQNILVTSS- 156
Query: 139 EIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGL 198
G +K+ADFGL + F + T + APEVL ++SY VD W +
Sbjct: 157 ----------GQIKLADFGLAR-IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 205
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVN-----DEVRYPRFLSL 237
G + EM + F G + + I++ E +PR ++L
Sbjct: 206 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 35/220 (15%)
Query: 11 EYFAIKALKKGDIIARDEVESL--LSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVME 68
++ A+K ++ R E + L R + NTM ++++ F H+C E
Sbjct: 123 QHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMN---VIHMLENFTFRNHICMTFE 179
Query: 69 YAAGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
+ +L+ FS P +A ++ L LH++RII+ ++ E I
Sbjct: 180 LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH---CDLKPENI----- 231
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGL-CKEGMGFGDRTGTFCGTPEFLAPEVLT 185
L +K+ DFG C E R + + APEV+
Sbjct: 232 ---------------LLKQQGRSGIKVIDFGSSCYEH----QRVYXXIQSRFYRAPEVIL 272
Query: 186 ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
Y +D W LG ++ E+L G PG+DE + ++
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 48/224 (21%)
Query: 31 SLLSEKRIFEVANTMRHPFLVNLF-ACFQT----EAHVCFVMEYAAGGDLMMHIHADVFS 85
S + E + T HP +V LF C + E + V E+ D + + D
Sbjct: 57 STIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV---DQDLTTYLDKVP 113
Query: 86 EP-------RAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQ 138
EP + + + ++ GL +LH R+++R ++K +N V SS
Sbjct: 114 EPGVPTETIKDMMFQ--LLRGLDFLHSHRVVHR--------DLK------PQNILVTSS- 156
Query: 139 EIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGL 198
G +K+ADFGL + F + T + APEVL ++SY VD W +
Sbjct: 157 ----------GQIKLADFGLARI-YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 205
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVN-----DEVRYPRFLSL 237
G + EM + F G + + I++ E +PR ++L
Sbjct: 206 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 90/222 (40%), Gaps = 51/222 (22%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF-QT 59
V+L YR G A+K +K D A ++ L+E V +RH LV L +
Sbjct: 37 VMLGDYR--GNKVAVKCIKN-DATA----QAFLAEA---SVMTQLRHSNLVQLLGVIVEE 86
Query: 60 EAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAAC-------VVLGLQYLHESRIIYRP 112
+ + V EY A G L+ ++ S R+V C V ++YL + ++R
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLR----SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR- 141
Query: 113 QSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF 172
++ + E V K++DFGL KE D TG
Sbjct: 142 --DLAARNVLVSEDNV----------------------AKVSDFGLTKEASSTQD-TGKL 176
Query: 173 CGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFP 213
++ APE L E ++ D W G+L++E+ G P+P
Sbjct: 177 --PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 136 SSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAV 193
+++ I L+ N+ VKI DFGL ++ D R G +++APE + + Y+
Sbjct: 226 AARNILLSENNV---VKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKS 282
Query: 194 DWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVND--EVRYPRFLSLEAIAIM 243
D W GVL++E+ +G SP+PG +E F S + + +R P + + E IM
Sbjct: 283 DVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIM 335
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 29/223 (13%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V + ++ TGE AIK ++ D + L R ++ +H ++ +F + +
Sbjct: 27 VCSATHKPTGEIVAIKKIEPFD-----KPLFALRTLREIKILKHFKHENIITIFNIQRPD 81
Query: 61 A----HVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNI 116
+ + ++++ DL I + S+ ++ + ++ LH S +I+R
Sbjct: 82 SFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR----- 136
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGT--FCG 174
++K N +NS+ ++K+ G +I D G ++G
Sbjct: 137 ---DLK------PSNLLINSNCDLKVC---DFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 175 TPEFLAPEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
T + APEV LT Y+RA+D W G ++ E+ + FPG D
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 90/222 (40%), Gaps = 51/222 (22%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF-QT 59
V+L YR G A+K +K D A ++ L+E V +RH LV L +
Sbjct: 22 VMLGDYR--GNKVAVKCIKN-DATA----QAFLAEA---SVMTQLRHSNLVQLLGVIVEE 71
Query: 60 EAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAAC-------VVLGLQYLHESRIIYRP 112
+ + V EY A G L+ ++ S R+V C V ++YL + ++R
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLR----SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR- 126
Query: 113 QSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF 172
++ + E V K++DFGL KE D TG
Sbjct: 127 --DLAARNVLVSEDNV----------------------AKVSDFGLTKEASSTQD-TGKL 161
Query: 173 CGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFP 213
++ APE L E ++ D W G+L++E+ G P+P
Sbjct: 162 --PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 201
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 80 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 134
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G++YL + ++R ++ + E
Sbjct: 135 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR--------DLAARNCMLDE 186
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
+ V K+ADFGL KE ++TG +++A E L
Sbjct: 187 KFTV-----------------KVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQ 228
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 257
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 81 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 135
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G++YL + ++R ++ + E
Sbjct: 136 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR--------DLAARNCMLDE 187
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
+ V K+ADFGL KE ++TG +++A E L
Sbjct: 188 KFTV-----------------KVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQ 229
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 258
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 62 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 116
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G++YL + ++R + A+
Sbjct: 117 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR-----------DLAAR--- 162
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
N + K TV K+ADFGL KE ++TG +++A E L
Sbjct: 163 ----NCMLDEKFTV-------KVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQ 210
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 62 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 116
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G++YL + ++R + A+
Sbjct: 117 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR-----------DLAAR--- 162
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
N + K TV K+ADFGL KE ++TG +++A E L
Sbjct: 163 ----NCMLDEKFTV-------KVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQ 210
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 33 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 84
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 85 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 133
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + V+DT KIADFGL + E R G
Sbjct: 134 ------------------DLRAANILVSDTLS-CKIADFGLARLIEDAEXTAREGAKFPI 174
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 175 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 90/222 (40%), Gaps = 51/222 (22%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF-QT 59
V+L YR G A+K +K D A ++ L+E V +RH LV L +
Sbjct: 209 VMLGDYR--GNKVAVKCIKN-DATA----QAFLAEA---SVMTQLRHSNLVQLLGVIVEE 258
Query: 60 EAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAAC-------VVLGLQYLHESRIIYRP 112
+ + V EY A G L+ ++ S R+V C V ++YL + ++R
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLR----SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR- 313
Query: 113 QSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF 172
++ + E V K++DFGL KE D TG
Sbjct: 314 --DLAARNVLVSEDNV----------------------AKVSDFGLTKEASSTQD-TGKL 348
Query: 173 CGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFP 213
++ APE L E ++ D W G+L++E+ G P+P
Sbjct: 349 --PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 388
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 61 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 115
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G++YL + ++R + A+
Sbjct: 116 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR-----------DLAAR--- 161
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
N + K TV K+ADFGL KE ++TG +++A E L
Sbjct: 162 ----NCMLDEKFTV-------KVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQ 209
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 59 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 113
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G++YL + ++R + A+
Sbjct: 114 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR-----------DLAAR--- 159
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
N + K TV K+ADFGL KE ++TG +++A E L
Sbjct: 160 ----NCMLDEKFTV-------KVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQ 207
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 236
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 51 VNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEP----RAVFYAACVVLGLQYLHES 106
V +F F H+C E + P R + + C +++LH++
Sbjct: 99 VQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQ--AVKFLHDN 156
Query: 107 RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFG 166
++ + +++ E I + + + Y + ++ + +V T V++ DFG
Sbjct: 157 KLTH---TDLKPENILFVNSDYELTYNLEKKRDER-SVKSTA--VRVVDFG---SATFDH 207
Query: 167 DRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 219
+ T T + APEV+ E +++ D W +G +IFE VG + F D E
Sbjct: 208 EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNRE 260
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 54 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 108
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G++YL + ++R + A+
Sbjct: 109 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR-----------DLAAR--- 154
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
N + K TV K+ADFGL KE ++TG +++A E L
Sbjct: 155 ----NCMLDEKFTV-------KVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQ 202
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 231
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 57 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 111
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G++YL + ++R + A+
Sbjct: 112 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR-----------DLAAR--- 157
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
N + K TV K+ADFGL KE ++TG +++A E L
Sbjct: 158 ----NCMLDEKFTV-------KVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQ 205
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 234
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 60 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 114
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G++YL + ++R + A+
Sbjct: 115 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR-----------DLAAR--- 160
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
N + K TV K+ADFGL KE ++TG +++A E L
Sbjct: 161 ----NCMLDEKFTV-------KVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQ 208
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 35 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 86
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 87 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 135
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + V+DT KIADFGL + E R G
Sbjct: 136 ------------------DLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI 176
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 177 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 225
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 34 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 85
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 86 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 134
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + V+DT KIADFGL + E R G
Sbjct: 135 ------------------DLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI 175
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 176 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 224
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 41 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 92
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 93 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 141
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + V+DT KIADFGL + E R G
Sbjct: 142 ------------------DLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI 182
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 183 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 231
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 32/167 (19%)
Query: 53 LFACFQTEAHVCFVMEYAAGGDLMMHIH--ADVFSEPRAVFYAACVVLGLQYLHESRIIY 110
LF + T+ + V ++ G L H+H F + + A G+ YLH II+
Sbjct: 96 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG 170
R ++K + E+ LT VKI DFGL E +
Sbjct: 156 R--------DLKSNNIFLHED----------LT-------VKIGDFGLATEKSRWSGSHQ 190
Query: 171 --TFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGESPF 212
G+ ++APEV+ + Y+ D + G++++E++ G+ P+
Sbjct: 191 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 32/167 (19%)
Query: 53 LFACFQTEAHVCFVMEYAAGGDLMMHIH--ADVFSEPRAVFYAACVVLGLQYLHESRIIY 110
LF + T+ + V ++ G L H+H F + + A G+ YLH II+
Sbjct: 88 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 147
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG 170
R ++K + E+ LT VKI DFGL E +
Sbjct: 148 R--------DLKSNNIFLHED----------LT-------VKIGDFGLATEKSRWSGSHQ 182
Query: 171 --TFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGESPF 212
G+ ++APEV+ + Y+ D + G++++E++ G+ P+
Sbjct: 183 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 39 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 90
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 91 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 139
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + V+DT KIADFGL + E R G
Sbjct: 140 ------------------DLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI 180
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 181 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 11/164 (6%)
Query: 56 CFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYR---P 112
CF+ HV M Y + +++ F E R Y + L+ +H+ I++R P
Sbjct: 88 CFRKNDHVVIAMPYLEHESFLDILNSLSFQEVRE--YMLNLFKALKRIHQFGIVHRDVKP 145
Query: 113 QSNITKEEIKR---IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRT 169
+ + +K+ ++ + + + +K +E + C + +
Sbjct: 146 SNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFV--QSEAQQERCSQNKCSICLSRRQQV 203
Query: 170 GTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIFEMLVGESPF 212
GTP F APEVLT+ + T A+D W GV+ +L G PF
Sbjct: 204 APRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 42 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 93
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 94 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 142
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + V+DT KIADFGL + E R G
Sbjct: 143 ------------------DLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI 183
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 184 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 232
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 33 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 84
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 85 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 133
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + V+DT KIADFGL + E R G
Sbjct: 134 ------------------DLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI 174
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 175 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 50/230 (21%)
Query: 6 YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF 65
Y N A+K+LK+G + ++ L+E + + ++H LV L+A T+ +
Sbjct: 33 YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMK---QLQHQRLVRLYAVV-TQEPIYI 84
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFY--------AACVVLGLQYLHESRIIYRPQSNIT 117
+ EY G L+ D P + AA + G+ ++ E I+R
Sbjct: 85 ITEYMENGSLV-----DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR------ 133
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGT 175
+ + V+DT KIADFGL + E R G
Sbjct: 134 ------------------DLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPI 174
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ APE + ++T D W G+L+ E++ G P+PG EV ++
Sbjct: 175 -KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 30/140 (21%)
Query: 88 RAVFYAACVVLGLQYLHESRIIYR--PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN 145
R + +++G+++LH + II+R SNI V
Sbjct: 127 RMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI---------------------------VV 159
Query: 146 DTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM 205
++ +KI DFGL + G + T + APEV+ Y VD W +G ++ EM
Sbjct: 160 KSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 206 LVGESPFPGDDEEEVFDSIV 225
+ G FPG D + ++ ++
Sbjct: 219 IKGGVLFPGTDHIDQWNKVI 238
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 32/167 (19%)
Query: 53 LFACFQTEAHVCFVMEYAAGGDLMMHIH--ADVFSEPRAVFYAACVVLGLQYLHESRIIY 110
LF + T+ + V ++ G L H+H F + + A G+ YLH II+
Sbjct: 68 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTG 170
R ++K + E+ LT VKI DFGL E +
Sbjct: 128 R--------DLKSNNIFLHED----------LT-------VKIGDFGLATEKSRWSGSHQ 162
Query: 171 --TFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGESPF 212
G+ ++APEV+ + Y+ D + G++++E++ G+ P+
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 32/206 (15%)
Query: 14 AIKALKKGDIIARDE-VESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAG 72
AIK+L GD E +E +R + + + HP +V L+ + VME+
Sbjct: 48 AIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPC 105
Query: 73 GDLMMHI--HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL + A + + LG++Y+ I +++
Sbjct: 106 GDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ------NPPIVHRDLR-------- 151
Query: 131 NYKVNSSQEIKLTVNDTEGYV--KIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL--TE 186
S I L D V K+ADFGL ++ + G +++APE + E
Sbjct: 152 ------SPNIFLQSLDENAPVCAKVADFGLSQQSV---HSVSGLLGNFQWMAPETIGAEE 202
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPF 212
SYT D + ++++ +L GE PF
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 30/171 (17%)
Query: 48 PFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYLHES 106
P +V L+ + V ME GG L + E RA++Y + GL+YLH
Sbjct: 145 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 204
Query: 107 RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG----LCKEG 162
RI++ ++ + + ++ + + DFG L +G
Sbjct: 205 RILH---GDVKADNV---------------------LLSSDGSHAALCDFGHAVCLQPDG 240
Query: 163 MGFGDRTGTFC-GTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+G TG + GT +APEV+ S VD W ++ ML G P+
Sbjct: 241 LGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 41/221 (18%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V + R A+K+ + + + D L E RI + HP +V L +
Sbjct: 130 VFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILK---QYSHPNIVRLIGVCTQK 184
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-----VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSN 115
+ VME GGD + + + V + + V AA G++YL I+R +
Sbjct: 185 QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAA---GMEYLESKCCIHR---D 238
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK-EGMGFGDRTGTFCG 174
+ E V +KI+DFG+ + E G +G
Sbjct: 239 LAARNCLVTEKNV----------------------LKISDFGMSREEADGVXAASGGLRQ 276
Query: 175 TP-EFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFP 213
P ++ APE L Y+ D W G+L++E +G SP+P
Sbjct: 277 VPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYP 317
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 32/167 (19%)
Query: 53 LFACFQTEAHVCFVMEYAAGGDLMMHIH--ADVFSEPRAVFYAACVVLGLQYLHESRIIY 110
LF + T+ + V ++ G L H+H F + + A G+ YLH II+
Sbjct: 95 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 154
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC--KEGMGFGDR 168
R ++K + E+ LT VKI DFGL K +
Sbjct: 155 R--------DLKSNNIFLHED----------LT-------VKIGDFGLATVKSRWSGSHQ 189
Query: 169 TGTFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGESPF 212
G+ ++APEV+ + Y+ D + G++++E++ G+ P+
Sbjct: 190 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 30/171 (17%)
Query: 48 PFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHAD-VFSEPRAVFYAACVVLGLQYLHES 106
P +V L+ + V ME GG L + E RA++Y + GL+YLH
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 185
Query: 107 RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG----LCKEG 162
RI++ ++ + + ++ + + DFG L +G
Sbjct: 186 RILH---GDVKADNV---------------------LLSSDGSHAALCDFGHAVCLQPDG 221
Query: 163 MGFGDRTGTFC-GTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+G TG + GT +APEV+ S VD W ++ ML G P+
Sbjct: 222 LGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 33/197 (16%)
Query: 36 KRIFEVANTMRHPFLVNLFACFQTE--AHVCFVMEYAAGG--DLMMHIHADVFSEPRAVF 91
K+ ++ +RH ++ L E + VMEY G +++ + F +A
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHG 113
Query: 92 YAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYV 151
Y ++ GL+YLH I+++ +IK + LT T G +
Sbjct: 114 YFCQLIDGLEYLHSQGIVHK--------DIK--------------PGNLLLT---TGGTL 148
Query: 152 KIADFGLCKEGMGFG--DRTGTFCGTPEFLAPEVLT--ETSYTRAVDWWGLGVLIFEMLV 207
KI+ G+ + F D T G+P F PE+ +T VD W GV ++ +
Sbjct: 149 KISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITT 208
Query: 208 GESPFPGDDEEEVFDSI 224
G PF GD+ ++F++I
Sbjct: 209 GLYPFEGDNIYKLFENI 225
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 32/167 (19%)
Query: 53 LFACFQTEAHVCFVMEYAAGGDLMMHIH--ADVFSEPRAVFYAACVVLGLQYLHESRIIY 110
LF + T+ + V ++ G L H+H F + + A G+ YLH II+
Sbjct: 96 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC--KEGMGFGDR 168
R ++K + E+ LT VKI DFGL K +
Sbjct: 156 R--------DLKSNNIFLHED----------LT-------VKIGDFGLATVKSRWSGSHQ 190
Query: 169 TGTFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGESPF 212
G+ ++APEV+ + Y+ D + G++++E++ G+ P+
Sbjct: 191 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 32/167 (19%)
Query: 53 LFACFQTEAHVCFVMEYAAGGDLMMHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIY 110
LF + T+ + V ++ G L H+H F + + A G+ YLH II+
Sbjct: 70 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 129
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC--KEGMGFGDR 168
R ++K + E+ LT VKI DFGL K +
Sbjct: 130 R--------DLKSNNIFLHED----------LT-------VKIGDFGLATVKSRWSGSHQ 164
Query: 169 TGTFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGESPF 212
G+ ++APEV+ + Y+ D + G++++E++ G+ P+
Sbjct: 165 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 34/205 (16%)
Query: 24 IARDEVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH 80
I ++E + + AN M+ +P++V + + E+ + VME A G L ++
Sbjct: 61 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ 119
Query: 81 ADVFSEPRAVF-YAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE 139
+ + + + V +G++YL ES ++R + ++
Sbjct: 120 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA----------------------ARN 157
Query: 140 IKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTP-EFLAPEVLTETSYTRAVDWW 196
+ L T+ Y KI+DFGL K + + T P ++ APE + ++ D W
Sbjct: 158 VLLV---TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 197 GLGVLIFEML-VGESPFPGDDEEEV 220
GVL++E G+ P+ G EV
Sbjct: 215 SFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 34/205 (16%)
Query: 24 IARDEVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH 80
I ++E + + AN M+ +P++V + + E+ + VME A G L ++
Sbjct: 61 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ 119
Query: 81 ADVFSEPRAVF-YAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE 139
+ + + + V +G++YL ES ++R + ++
Sbjct: 120 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA----------------------ARN 157
Query: 140 IKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTP-EFLAPEVLTETSYTRAVDWW 196
+ L T+ Y KI+DFGL K + + T P ++ APE + ++ D W
Sbjct: 158 VLLV---TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 197 GLGVLIFEML-VGESPFPGDDEEEV 220
GVL++E G+ P+ G EV
Sbjct: 215 SFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 34/205 (16%)
Query: 24 IARDEVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH 80
I ++E + + AN M+ +P++V + + E+ + VME A G L ++
Sbjct: 51 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ 109
Query: 81 ADVFSEPRAVF-YAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE 139
+ + + + V +G++YL ES ++R + ++
Sbjct: 110 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA----------------------ARN 147
Query: 140 IKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTP-EFLAPEVLTETSYTRAVDWW 196
+ L T+ Y KI+DFGL K + + T P ++ APE + ++ D W
Sbjct: 148 VLLV---TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 204
Query: 197 GLGVLIFEML-VGESPFPGDDEEEV 220
GVL++E G+ P+ G EV
Sbjct: 205 SFGVLMWEAFSYGQKPYRGMKGSEV 229
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 17/176 (9%)
Query: 52 NLFAC------FQTEAHVCFVMEYAAGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYL 103
N F C F H+C E + + + + P A + L++L
Sbjct: 89 NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFL 148
Query: 104 HESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGM 163
HE+++ + +++ E I + ++ + Y + S E K N + +++ADFG
Sbjct: 149 HENQLTH---TDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS---IRVADFG---SAT 199
Query: 164 GFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 219
+ T T + PEV+ E + + D W +G ++FE G + F + E
Sbjct: 200 FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 255
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 44/210 (20%)
Query: 8 NTGEYFAIKALK-KGDIIARDEVESLLSEKRIFEVANTMRHPFLVNL--FACFQTEAHVC 64
NTG A+K L+ G RD +R ++ + F+V + +
Sbjct: 34 NTGALVAVKQLQHSGPDQQRDF-------QREIQILKALHSDFIVKYRGVSYGPGRPELR 86
Query: 65 FVMEYAAGGDL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIK 122
VMEY G L + H R + Y++ + G++YL R ++R ++ I
Sbjct: 87 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR---DLAARNI- 142
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE----- 177
+ ++E +VKIADFGL K + D+ P
Sbjct: 143 ---------------------LVESEAHVKIADFGLAK--LLPLDKDXXVVREPGQSPIF 179
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
+ APE L++ ++R D W GV+++E+
Sbjct: 180 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 34/205 (16%)
Query: 24 IARDEVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH 80
I ++E + + AN M+ +P++V + + E+ + VME A G L ++
Sbjct: 45 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ 103
Query: 81 ADVFSEPRAVF-YAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE 139
+ + + + V +G++YL ES ++R + ++
Sbjct: 104 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA----------------------ARN 141
Query: 140 IKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTP-EFLAPEVLTETSYTRAVDWW 196
+ L T+ Y KI+DFGL K + + T P ++ APE + ++ D W
Sbjct: 142 VLLV---TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 197 GLGVLIFEML-VGESPFPGDDEEEV 220
GVL++E G+ P+ G EV
Sbjct: 199 SFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 34/205 (16%)
Query: 24 IARDEVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH 80
I ++E + + AN M+ +P++V + + E+ + VME A G L ++
Sbjct: 39 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ 97
Query: 81 ADVFSEPRAVF-YAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE 139
+ + + + V +G++YL ES ++R + ++
Sbjct: 98 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA----------------------ARN 135
Query: 140 IKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTP-EFLAPEVLTETSYTRAVDWW 196
+ L T+ Y KI+DFGL K + + T P ++ APE + ++ D W
Sbjct: 136 VLLV---TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 192
Query: 197 GLGVLIFEML-VGESPFPGDDEEEV 220
GVL++E G+ P+ G EV
Sbjct: 193 SFGVLMWEAFSYGQKPYRGMKGSEV 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 32/167 (19%)
Query: 53 LFACFQTEAHVCFVMEYAAGGDLMMHIH--ADVFSEPRAVFYAACVVLGLQYLHESRIIY 110
LF + T+ + V ++ G L H+H F + + A G+ YLH II+
Sbjct: 73 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC--KEGMGFGDR 168
R ++K + E+ LT VKI DFGL K +
Sbjct: 133 R--------DLKSNNIFLHED----------LT-------VKIGDFGLATVKSRWSGSHQ 167
Query: 169 TGTFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGESPF 212
G+ ++APEV+ + Y+ D + G++++E++ G+ P+
Sbjct: 168 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 34/205 (16%)
Query: 24 IARDEVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH 80
I ++E + + AN M+ +P++V + + E+ + VME A G L ++
Sbjct: 41 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ 99
Query: 81 ADVFSEPRAVF-YAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE 139
+ + + + V +G++YL ES ++R + ++
Sbjct: 100 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA----------------------ARN 137
Query: 140 IKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTP-EFLAPEVLTETSYTRAVDWW 196
+ L T+ Y KI+DFGL K + + T P ++ APE + ++ D W
Sbjct: 138 VLLV---TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 194
Query: 197 GLGVLIFEML-VGESPFPGDDEEEV 220
GVL++E G+ P+ G EV
Sbjct: 195 SFGVLMWEAFSYGQKPYRGMKGSEV 219
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 34/205 (16%)
Query: 24 IARDEVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH 80
I ++E + + AN M+ +P++V + + E+ + VME A G L ++
Sbjct: 45 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ 103
Query: 81 ADVFSEPRAVF-YAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE 139
+ + + + V +G++YL ES ++R + ++
Sbjct: 104 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA----------------------ARN 141
Query: 140 IKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTP-EFLAPEVLTETSYTRAVDWW 196
+ L T+ Y KI+DFGL K + + T P ++ APE + ++ D W
Sbjct: 142 VLLV---TQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 197 GLGVLIFEML-VGESPFPGDDEEEV 220
GVL++E G+ P+ G EV
Sbjct: 199 SFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 17/176 (9%)
Query: 52 NLFAC------FQTEAHVCFVMEYAAGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYL 103
N F C F H+C E + + + + P A + L++L
Sbjct: 80 NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFL 139
Query: 104 HESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGM 163
HE+++ + +++ E I + ++ + Y + S E K N + +++ADFG
Sbjct: 140 HENQLTH---TDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS---IRVADFG---SAT 190
Query: 164 GFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 219
+ T T + PEV+ E + + D W +G ++FE G + F + E
Sbjct: 191 FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 32/167 (19%)
Query: 53 LFACFQTEAHVCFVMEYAAGGDLMMHIH--ADVFSEPRAVFYAACVVLGLQYLHESRIIY 110
LF + T+ + V ++ G L H+H F + + A G+ YLH II+
Sbjct: 73 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC--KEGMGFGDR 168
R ++K + E+ LT VKI DFGL K +
Sbjct: 133 R--------DLKSNNIFLHED----------LT-------VKIGDFGLATVKSRWSGSHQ 167
Query: 169 TGTFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGESPF 212
G+ ++APEV+ + Y+ D + G++++E++ G+ P+
Sbjct: 168 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 34/205 (16%)
Query: 24 IARDEVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH 80
I ++E + + AN M+ +P++V + + E+ + VME A G L ++
Sbjct: 59 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ 117
Query: 81 ADVFSEPRAVF-YAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE 139
+ + + + V +G++YL ES ++R + ++
Sbjct: 118 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA----------------------ARN 155
Query: 140 IKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTP-EFLAPEVLTETSYTRAVDWW 196
+ L T+ Y KI+DFGL K + + T P ++ APE + ++ D W
Sbjct: 156 VLLV---TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 212
Query: 197 GLGVLIFEML-VGESPFPGDDEEEV 220
GVL++E G+ P+ G EV
Sbjct: 213 SFGVLMWEAFSYGQKPYRGMKGSEV 237
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 69/174 (39%), Gaps = 30/174 (17%)
Query: 45 MRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYL 103
+ P +V L+ + V ME GG L I E RA++Y + GL+YL
Sbjct: 123 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYL 182
Query: 104 HESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG--LC-- 159
H RI++ V+ + + SS + + DFG LC
Sbjct: 183 HTRRILH---------------GDVKADNVLLSSDGSR---------AALCDFGHALCLQ 218
Query: 160 KEGMGFGDRTGTFC-GTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+G+G TG + GT +APEV+ VD W ++ ML G P+
Sbjct: 219 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 53/257 (20%)
Query: 8 NTGEYFAIKALK-----KGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT--E 60
++G + A+K+++ +G I+ +LL FE N +R L+++ A +T E
Sbjct: 27 HSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR---LMDVCATSRTDRE 83
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACV-------VLGLQYLHESRIIYRPQ 113
V V E+ D + + D P A + + GL +LH + I++R
Sbjct: 84 IKVTLVFEHV---DQDLRTYLD--KAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHR-- 136
Query: 114 SNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFC 173
++K EN V S G VK+ADFGL + +
Sbjct: 137 ------DLK------PENILVTSG-----------GTVKLADFGLARI-YSYQMALAPVV 172
Query: 174 GTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VNDE 228
T + APEVL +++Y VD W +G + EM + F G+ E + +FD I + E
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 229 VRYPRFLSLEAIAIMRR 245
+PR +SL A R
Sbjct: 233 DDWPRDVSLPRGAFPPR 249
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 147 TEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML 206
++ +KI DFGL + G + T + APEV+ Y VD W +G ++ EM+
Sbjct: 161 SDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 207 VGESPFPGDDEEEVFDSIV 225
G FPG D + ++ ++
Sbjct: 220 KGGVLFPGTDHIDQWNKVI 238
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 17/176 (9%)
Query: 52 NLFAC------FQTEAHVCFVMEYAAGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYL 103
N F C F H+C E + + + + P A + L++L
Sbjct: 112 NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFL 171
Query: 104 HESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGM 163
HE+++ + +++ E I + ++ + Y + S E K N + +++ADFG
Sbjct: 172 HENQLTH---TDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS---IRVADFG---SAT 222
Query: 164 GFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 219
+ T T + PEV+ E + + D W +G ++FE G + F + E
Sbjct: 223 FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 278
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 32/167 (19%)
Query: 53 LFACFQTEAHVCFVMEYAAGGDLMMHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIY 110
LF + T+ + V ++ G L H+H F + + A G+ YLH II+
Sbjct: 68 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC--KEGMGFGDR 168
R ++K + E+ VKI DFGL K +
Sbjct: 128 R--------DLKSNNIFLHEDLT-----------------VKIGDFGLATVKSRWSGSHQ 162
Query: 169 TGTFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGESPF 212
G+ ++APEV+ + Y+ D + G++++E++ G+ P+
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 69/174 (39%), Gaps = 30/174 (17%)
Query: 45 MRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYL 103
+ P +V L+ + V ME GG L I E RA++Y + GL+YL
Sbjct: 107 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYL 166
Query: 104 HESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG--LC-- 159
H RI++ V+ + + SS + + DFG LC
Sbjct: 167 HTRRILH---------------GDVKADNVLLSSDGSR---------AALCDFGHALCLQ 202
Query: 160 KEGMGFGDRTGTFC-GTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+G+G TG + GT +APEV+ VD W ++ ML G P+
Sbjct: 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 147 TEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML 206
++ +KI DFGL + G + T + APEV+ Y VD W +G ++ EM+
Sbjct: 161 SDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 207 VGESPFPGDDEEEVFDSIV 225
G FPG D + ++ ++
Sbjct: 220 KGGVLFPGTDHIDQWNKVI 238
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 69/174 (39%), Gaps = 30/174 (17%)
Query: 45 MRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI-HADVFSEPRAVFYAACVVLGLQYL 103
+ P +V L+ + V ME GG L I E RA++Y + GL+YL
Sbjct: 121 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYL 180
Query: 104 HESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG--LC-- 159
H RI++ V+ + + SS + + DFG LC
Sbjct: 181 HTRRILH---------------GDVKADNVLLSSDGSR---------AALCDFGHALCLQ 216
Query: 160 KEGMGFGDRTGTFC-GTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
+G+G TG + GT +APEV+ VD W ++ ML G P+
Sbjct: 217 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 41/221 (18%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE 60
V + R A+K+ + + + D L E RI + HP +V L +
Sbjct: 130 VFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILK---QYSHPNIVRLIGVCTQK 184
Query: 61 AHVCFVMEYAAGGDLMMHIHAD-----VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSN 115
+ VME GGD + + + V + + V AA G++YL I+R +
Sbjct: 185 QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAA---GMEYLESKCCIHR---D 238
Query: 116 ITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK-EGMGFGDRTGTFCG 174
+ E V +KI+DFG+ + E G +G
Sbjct: 239 LAARNCLVTEKNV----------------------LKISDFGMSREEADGVYAASGGLRQ 276
Query: 175 TP-EFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFP 213
P ++ APE L Y+ D W G+L++E +G SP+P
Sbjct: 277 VPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYP 317
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 62/227 (27%)
Query: 10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF------------ 57
Y+AIK ++ + +++ ++LSE + ++ H ++V +A +
Sbjct: 31 SRYYAIKKIRHTE----EKLSTILSEVMLLA---SLNHQYVVRYYAAWLERRNFVKPMTA 83
Query: 58 -QTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYA--ACVVLGLQYLHESRIIYRPQS 114
+ ++ + MEY L IH++ ++ R ++ ++ L Y+H II+R
Sbjct: 84 VKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHR--- 140
Query: 115 NITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGM----------- 163
++K + + E+ V KI DFGL K
Sbjct: 141 -----DLKPMNIFIDESRNV-----------------KIGDFGLAKNVHRSLDILKLDSQ 178
Query: 164 ---GFGDRTGTFCGTPEFLAPEVLTETS-YTRAVDWWGLGVLIFEML 206
G D + GT ++A EVL T Y +D + LG++ FEM+
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPE-----FLAPEVLTETSYTRAVDWWGLGVLIFEM 205
+KI DFGL + +F TPE + APEV+ Y VD W +G ++ EM
Sbjct: 165 LKILDFGLARTA------GTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 206 LVGESPFPGDDEEEVFDSIV 225
+ G FPG D + ++ ++
Sbjct: 219 IKGGVLFPGTDHIDQWNKVI 238
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 40/211 (18%)
Query: 12 YFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYA 70
+ A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 61 HCAVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYM 115
Query: 71 AGGDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV 128
GDL I + + + + V G+++L + ++R ++ +
Sbjct: 116 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR--------DLAARNCML 167
Query: 129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGM-----GFGDRTGTFCGTPEFLAPEV 183
E + V K+ADFGL ++ + ++TG +++A E
Sbjct: 168 DEKFTV-----------------KVADFGLARDMLDKEFDSVHNKTGAKLPV-KWMALES 209
Query: 184 LTETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
L +T D W GVL++E++ G P+P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 121 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 175
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G+++L + ++R ++ + E
Sbjct: 176 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR--------DLAARNCMLDE 227
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
+ V K+ADFGL KE ++TG +++A E L
Sbjct: 228 KFTV-----------------KVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQ 269
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 298
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 103/240 (42%), Gaps = 46/240 (19%)
Query: 3 LSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEA 61
L Q T A+K +K D ++ E+E LSE + HP ++ L C + +
Sbjct: 55 LKQEDGTSLKVAVKTMKL-DNSSQREIEEFLSEAACMK---DFSHPNVIRLLGVCIEMSS 110
Query: 62 H----VCFVMEYAAGGDLMMHI-HADVFSEPRAV------FYAACVVLGLQYLHESRIIY 110
++ + GDL ++ ++ + + P+ + + + LG++YL ++
Sbjct: 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLH 170
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--R 168
R ++ ++++ V +ADFGL K+ + GD R
Sbjct: 171 R--------DLAARNCMLRDDMTVC-----------------VADFGLSKK-IYSGDYYR 204
Query: 169 TGTFCGTP-EFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVN 226
G P +++A E L + YT D W GV ++E+ G +P+PG E++D +++
Sbjct: 205 QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH 264
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 60 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 114
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G+++L + ++R + A+
Sbjct: 115 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR-----------DLAAR--- 160
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
N + K TV K+ADFGL KE ++TG +++A E L
Sbjct: 161 ----NCMLDEKFTV-------KVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQ 208
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 33/172 (19%)
Query: 66 VMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNIT 117
++E AGGDL + S+P ++ A + G QYL E+ I+R
Sbjct: 152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR------ 205
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGT 175
+I +++ LT KI DFG+ ++ G+ + G
Sbjct: 206 --DI--------------AARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 249
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 301
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 67 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 121
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G+++L + ++R + A+
Sbjct: 122 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR-----------DLAAR--- 167
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
N + K TV K+ADFGL KE ++TG +++A E L
Sbjct: 168 ----NCMLDEKFTV-------KVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQ 215
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 244
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 63 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 117
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G+++L + ++R + A+
Sbjct: 118 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR-----------DLAAR--- 163
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
N + K TV K+ADFGL KE ++TG +++A E L
Sbjct: 164 ----NCMLDEKFTV-------KVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQ 211
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 62 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 116
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G+++L + ++R + A+
Sbjct: 117 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR-----------DLAAR--- 162
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
N + K TV K+ADFGL KE ++TG +++A E L
Sbjct: 163 ----NCMLDEKFTV-------KVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQ 210
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 53/257 (20%)
Query: 8 NTGEYFAIKALK-----KGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT--E 60
++G + A+K+++ +G I+ +LL FE N +R L+++ A +T E
Sbjct: 27 HSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR---LMDVCATSRTDRE 83
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACV-------VLGLQYLHESRIIYRPQ 113
V V E+ D + + D P A + + GL +LH + I++R
Sbjct: 84 IKVTLVFEHV---DQDLRTYLD--KAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHR-- 136
Query: 114 SNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFC 173
++K EN V S G VK+ADFGL + +
Sbjct: 137 ------DLK------PENILVTSG-----------GTVKLADFGLARI-YSYQMALDPVV 172
Query: 174 GTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VNDE 228
T + APEVL +++Y VD W +G + EM + F G+ E + +FD I + E
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 229 VRYPRFLSLEAIAIMRR 245
+PR +SL A R
Sbjct: 233 DDWPRDVSLPRGAFPPR 249
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 40/209 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAHVCFVMEYAAG 72
A+K+L + I EV L+E I + HP +++L C ++E V+ Y
Sbjct: 62 AVKSLNR--ITDIGEVSQFLTEGIIMK---DFSHPNVLSLLGICLRSEGSPLVVLPYMKH 116
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL I + + + + V G+++L + ++R + A+
Sbjct: 117 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR-----------DLAAR--- 162
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLC-----KEGMGFGDRTGTFCGTPEFLAPEVLT 185
N + K TV K+ADFGL KE ++TG +++A E L
Sbjct: 163 ----NCMLDEKFTV-------KVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQ 210
Query: 186 ETSYTRAVDWWGLGVLIFEMLV-GESPFP 213
+T D W GVL++E++ G P+P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 151 VKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-V 207
VKI DFGL ++ D R G +++APE + + YT D W GVL++E+ +
Sbjct: 230 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 289
Query: 208 GESPFPGDDEEEVFDSIVND--EVRYPRFLSLEAIAIM 243
G SP+PG +E F + + +R P + + E M
Sbjct: 290 GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 327
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G F T + APEV+ Y VD W +G ++ EM+ G
Sbjct: 167 LKILDFGLARTA-GTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 225
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 226 LFPGTDHIDQWNKVI 240
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 33/173 (19%)
Query: 65 FVMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNI 116
++E AGGDL + S+P ++ A + G QYL E+ I+R
Sbjct: 128 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR----- 182
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+I +++ LT KI DFG+ ++ G+ + G
Sbjct: 183 ---DI--------------AARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 225
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 226 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 278
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 151 VKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-V 207
VKI DFGL ++ D R G +++APE + + YT D W GVL++E+ +
Sbjct: 232 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 291
Query: 208 GESPFPGDDEEEVFDSIVND--EVRYPRFLSLEAIAIM 243
G SP+PG +E F + + +R P + + E M
Sbjct: 292 GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 329
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 151 VKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-V 207
VKI DFGL ++ D R G +++APE + + YT D W GVL++E+ +
Sbjct: 237 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 296
Query: 208 GESPFPGDDEEEVFDSIVND--EVRYPRFLSLEAIAIM 243
G SP+PG +E F + + +R P + + E M
Sbjct: 297 GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 334
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 32/167 (19%)
Query: 53 LFACFQTEAHVCFVMEYAAGGDLMMHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIY 110
LF + T + V ++ G L H+H F + + A G+ YLH II+
Sbjct: 68 LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC--KEGMGFGDR 168
R ++K + E+ VKI DFGL K +
Sbjct: 128 R--------DLKSNNIFLHEDLT-----------------VKIGDFGLATVKSRWSGSHQ 162
Query: 169 TGTFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGESPF 212
G+ ++APEV+ + Y+ D + G++++E++ G+ P+
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ G
Sbjct: 165 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 224 LFPGTDHIDQWNKVI 238
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 151 VKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-V 207
VKI DFGL ++ D R G +++APE + + YT D W GVL++E+ +
Sbjct: 239 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 298
Query: 208 GESPFPGDDEEEVFDSIVND--EVRYPRFLSLEAIAIM 243
G SP+PG +E F + + +R P + + E M
Sbjct: 299 GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 336
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ G
Sbjct: 165 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 224 LFPGTDHIDQWNKVI 238
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ G
Sbjct: 165 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 224 LFPGTDHIDQWNKVI 238
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 34/205 (16%)
Query: 24 IARDEVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH 80
I ++E + + AN M+ +P++V + + E+ + VME A G L ++
Sbjct: 404 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ 462
Query: 81 ADVFSEPRAVF-YAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE 139
+ + + + V +G++YL ES ++R ++ + +
Sbjct: 463 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHR---DLAARNVLLV--------------- 504
Query: 140 IKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTP-EFLAPEVLTETSYTRAVDWW 196
T+ Y KI+DFGL K + + T P ++ APE + ++ D W
Sbjct: 505 -------TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 557
Query: 197 GLGVLIFEML-VGESPFPGDDEEEV 220
GVL++E G+ P+ G EV
Sbjct: 558 SFGVLMWEAFSYGQKPYRGMKGSEV 582
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 39/217 (17%)
Query: 8 NTGEYFAIKALK-KG--DIIARDEVESLLSEKRIFEVANTM---RHPFLVNLFACFQTEA 61
+G++ +K K KG D+ + E +SE F+ A TM HP LV + E
Sbjct: 17 GSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY 76
Query: 62 HVCFVMEYAAGGDLMMHI--HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKE 119
+ V EY + G L+ ++ H + + V G+ +L + I+R +
Sbjct: 77 PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLA----- 131
Query: 120 EIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP--- 176
+ + D + VK++DFG+ + + D+ + GT
Sbjct: 132 --------------------ARNCLVDRDLCVKVSDFGMTRYVL--DDQYVSSVGTKFPV 169
Query: 177 EFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPF 212
++ APEV Y+ D W G+L++E+ +G+ P+
Sbjct: 170 KWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ G
Sbjct: 166 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 224
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 225 LFPGTDHIDQWNKVI 239
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + G+ ++ + + APE + T YT ++D W G
Sbjct: 153 LLLDPDTAVLKLCDFGSAKQ-LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 211
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 212 VLAELLLGQPIFPGD 226
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 34/205 (16%)
Query: 24 IARDEVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH 80
I ++E + + AN M+ +P++V + + E+ + VME A G L ++
Sbjct: 403 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ 461
Query: 81 ADVFSEPRAVF-YAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE 139
+ + + + V +G++YL ES ++R ++ + +
Sbjct: 462 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHR---DLAARNVLLV--------------- 503
Query: 140 IKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTP-EFLAPEVLTETSYTRAVDWW 196
T+ Y KI+DFGL K + + T P ++ APE + ++ D W
Sbjct: 504 -------TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 556
Query: 197 GLGVLIFEML-VGESPFPGDDEEEV 220
GVL++E G+ P+ G EV
Sbjct: 557 SFGVLMWEAFSYGQKPYRGMKGSEV 581
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
GL +LH + I++R ++K EN V S G VK+ADFGL
Sbjct: 132 GLDFLHANCIVHR--------DLK------PENILVTSG-----------GTVKLADFGL 166
Query: 159 CKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE 218
+ + T + APEVL +++Y VD W +G + EM + F G+ E
Sbjct: 167 ARI-YSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 225
Query: 219 E----VFDSI-VNDEVRYPRFLSLEAIAIMRR 245
+ +FD I + E +PR +SL A R
Sbjct: 226 DQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPR 257
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + G+ ++ + + APE + T YT ++D W G
Sbjct: 153 LLLDPDTAVLKLCDFGSAKQ-LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 211
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 212 VLAELLLGQPIFPGD 226
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 43/230 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D+++ + E++ R +++ H L+ L+ T + V E A G
Sbjct: 44 AVKCLKP-DVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLG 99
Query: 74 DLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L+ + H F YA V G+ YL R I+R
Sbjct: 100 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL------------------ 141
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVL 184
+++ + L D VKI DFGL + D R F + APE L
Sbjct: 142 ----AARNLLLATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPESL 190
Query: 185 TETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
+++ A D W GV ++EM G+ P+ G + ++ I + R PR
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 28/171 (16%)
Query: 59 TEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITK 118
TE + ++++ DL + E A + ++ GL+Y+H + +++R
Sbjct: 92 TELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHR------- 144
Query: 119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCG---T 175
+ L +N + +KI DFGL + G T
Sbjct: 145 -----------------DLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 176 PEFLAPEVL-TETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
+ +P +L + +YT+A+D W G + EML G++ F G E E I+
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + G+ ++ + + APE + T YT ++D W G
Sbjct: 166 LLLDPDTAVLKLCDFGSAKQ-LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 224
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 225 VLAELLLGQPIFPGD 239
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 43/230 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D+++ + E++ R +++ H L+ L+ T + V E A G
Sbjct: 44 AVKCLKP-DVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLG 99
Query: 74 DLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L+ + H F YA V G+ YL R I+R
Sbjct: 100 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL------------------ 141
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVL 184
+++ + L D VKI DFGL + D R F + APE L
Sbjct: 142 ----AARNLLLATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPESL 190
Query: 185 TETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
+++ A D W GV ++EM G+ P+ G + ++ I + R PR
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + G+ ++ + + APE + T YT ++D W G
Sbjct: 153 LLLDPDTAVLKLCDFGSAKQ-LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 211
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 212 VLAELLLGQPIFPGD 226
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 57/259 (22%)
Query: 8 NTGEYFAIKALK-----KGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT--E 60
++G + A+K+++ +G I+ +LL FE N +R L+++ A +T E
Sbjct: 27 HSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR---LMDVCATSRTDRE 83
Query: 61 AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACV-------VLGLQYLHESRIIYRPQ 113
V V E+ D + + D P A + + GL +LH + I++R
Sbjct: 84 IKVTLVFEHV---DQDLRTYLD--KAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHR-- 136
Query: 114 SNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF- 172
++K EN V S G VK+ADFGL + + + F
Sbjct: 137 ------DLK------PENILVTSG-----------GTVKLADFGLARI---YSYQMALFP 170
Query: 173 -CGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE----VFDSI-VN 226
T + APEVL +++Y VD W +G + EM + F G+ E + +FD I +
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
Query: 227 DEVRYPRFLSLEAIAIMRR 245
E +PR +SL A R
Sbjct: 231 PEDDWPRDVSLPRGAFPPR 249
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 32/206 (15%)
Query: 14 AIKALKKGDIIARDE-VESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAG 72
AIK+L GD E +E +R + + + HP +V L+ + VME+
Sbjct: 48 AIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPC 105
Query: 73 GDLMMHI--HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL + A + + LG++Y+ I +++
Sbjct: 106 GDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ------NPPIVHRDLR-------- 151
Query: 131 NYKVNSSQEIKLTVNDTEGYV--KIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL--TE 186
S I L D V K+ADFG ++ + G +++APE + E
Sbjct: 152 ------SPNIFLQSLDENAPVCAKVADFGTSQQSV---HSVSGLLGNFQWMAPETIGAEE 202
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPF 212
SYT D + ++++ +L GE PF
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 43/230 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D+++ + E++ R +++ H L+ L+ T + V E A G
Sbjct: 40 AVKCLKP-DVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLG 95
Query: 74 DLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L+ + H F YA V G+ YL R I+R
Sbjct: 96 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL------------------ 137
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVL 184
+++ + L D VKI DFGL + D R F + APE L
Sbjct: 138 ----AARNLLLATRD---LVKIGDFGLMRALPQNDDHXVMQEHRKVPFA----WCAPESL 186
Query: 185 TETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
+++ A D W GV ++EM G+ P+ G + ++ I + R PR
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + G+ ++ + + APE + T YT ++D W G
Sbjct: 181 LLLDPDTAVLKLCDFGSAKQ-LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 239
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 240 VLAELLLGQPIFPGD 254
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 43/230 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D+++ + E++ R +++ H L+ L+ T + V E A G
Sbjct: 40 AVKCLKP-DVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLG 95
Query: 74 DLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L+ + H F YA V G+ YL R I+R
Sbjct: 96 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL------------------ 137
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVL 184
+++ + L D VKI DFGL + D R F + APE L
Sbjct: 138 ----AARNLLLATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPESL 186
Query: 185 TETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
+++ A D W GV ++EM G+ P+ G + ++ I + R PR
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 43/230 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D+++ + E++ R +++ H L+ L+ T + V E A G
Sbjct: 50 AVKCLKP-DVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLG 105
Query: 74 DLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L+ + H F YA V G+ YL R I+R
Sbjct: 106 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL------------------ 147
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVL 184
+++ + L D VKI DFGL + D R F + APE L
Sbjct: 148 ----AARNLLLATRD---LVKIGDFGLMRALPQNDDHXVMQEHRKVPFA----WCAPESL 196
Query: 185 TETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
+++ A D W GV ++EM G+ P+ G + ++ I + R PR
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 34/150 (22%)
Query: 65 FVMEYAAGGDL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIK 122
VMEY G L + H R + Y++ + G++YL R ++R ++ I
Sbjct: 90 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR---DLAARNI- 145
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE----- 177
+ ++E +VKIADFGL K + D+ P
Sbjct: 146 ---------------------LVESEAHVKIADFGLAK--LLPLDKDYYVVREPGQSPIF 182
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
+ APE L++ ++R D W GV+++E+
Sbjct: 183 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + G+ ++ + + APE + T YT ++D W G
Sbjct: 158 LLLDPDTAVLKLCDFGSAKQ-LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 216
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 217 VLAELLLGQPIFPGD 231
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 82/213 (38%), Gaps = 34/213 (15%)
Query: 8 NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVM 67
++GE AIK + +G E++ + R + N +R + + E ++ V+
Sbjct: 43 DSGELVAIKKVLQGKAFKNRELQIM----RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98
Query: 68 EYAAGGDLMMHIHADVFSEPRAVFYAACVVL----GLQYLHESRIIYRPQSNITKEEIKR 123
+Y + H + V Y + L Y+H I +R
Sbjct: 99 DYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHR------------ 146
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE- 182
+ K Q L ++ +K+ DFG K+ + C + APE
Sbjct: 147 -DIKPQN-----------LLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPEL 193
Query: 183 VLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD 215
+ T YT ++D W G ++ E+L+G+ FPGD
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 42/213 (19%)
Query: 20 KGDIIARDEV--ESLLSEKRI----FEVANTMRHPFLVNLFACF------QTEAHVCFVM 67
+ ++ DEV + +L +KR ++ ++HP +V+L A F + E + V+
Sbjct: 58 QAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117
Query: 68 EYAAGGDLMMHIHADVFSEPRAVF----YAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
EY H + + Y ++ L Y+H I +R
Sbjct: 118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHR------------ 165
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE- 182
+ K Q L ++ G +K+ DFG K + C + APE
Sbjct: 166 -DIKPQN-----------LLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR-YYRAPEL 212
Query: 183 VLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD 215
+ T+YT +D W G ++ E++ G+ FPG+
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE 245
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 43/230 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D+++ + E++ R +++ H L+ L+ T + V E A G
Sbjct: 50 AVKCLKP-DVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLG 105
Query: 74 DLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L+ + H F YA V G+ YL R I+R
Sbjct: 106 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL------------------ 147
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVL 184
+++ + L D VKI DFGL + D R F + APE L
Sbjct: 148 ----AARNLLLATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPESL 196
Query: 185 TETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
+++ A D W GV ++EM G+ P+ G + ++ I + R PR
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 43/230 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK D+++ + E++ R +++ H L+ L+ T + V E A G
Sbjct: 40 AVKCLKP-DVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLG 95
Query: 74 DLM--MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L+ + H F YA V G+ YL R I+R
Sbjct: 96 SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL------------------ 137
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVL 184
+++ + L D VKI DFGL + D R F + APE L
Sbjct: 138 ----AARNLLLATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPESL 186
Query: 185 TETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
+++ A D W GV ++EM G+ P+ G + ++ I + R PR
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 32/206 (15%)
Query: 14 AIKALKKGDIIARDE-VESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAG 72
AIK+L GD E +E +R + + + HP +V L+ + VME+
Sbjct: 48 AIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPC 105
Query: 73 GDLMMHI--HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL + A + + LG++Y+ I +++
Sbjct: 106 GDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ------NPPIVHRDLR-------- 151
Query: 131 NYKVNSSQEIKLTVNDTEGYV--KIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL--TE 186
S I L D V K+ADF L ++ + G +++APE + E
Sbjct: 152 ------SPNIFLQSLDENAPVCAKVADFSLSQQSV---HSVSGLLGNFQWMAPETIGAEE 202
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESPF 212
SYT D + ++++ +L GE PF
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + G+ ++ + + APE + T YT ++D W G
Sbjct: 187 LLLDPDTAVLKLCDFGSAKQ-LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 245
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 246 VLAELLLGQPIFPGD 260
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + C + APE + T YT ++D W G
Sbjct: 153 LLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGC 211
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 212 VLAELLLGQPIFPGD 226
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + G+ ++ + + APE + T YT ++D W G
Sbjct: 189 LLLDPDTAVLKLCDFGSAKQ-LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 247
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 248 VLAELLLGQPIFPGD 262
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 146 DTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLT-ETSYTRA-VDWWGLGVLIF 203
D G VK++DFG E M G+ GT EF+ PE + E+SY A VD W LG+ ++
Sbjct: 186 DKNGRVKLSDFGES-EYMVDKKIKGSR-GTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243
Query: 204 EMLVGESPFPGD-DEEEVFDSIVNDEVRYP 232
M PF E+F++I + YP
Sbjct: 244 VMFYNVVPFSLKISLVELFNNIRTKNIEYP 273
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 33/173 (19%)
Query: 65 FVMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNI 116
+ME AGGDL + S+P ++ A + G QYL E+ I+R
Sbjct: 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR----- 164
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+I +++ LT KI DFG+ ++ + + G
Sbjct: 165 ---DI--------------AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 260
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 34/150 (22%)
Query: 65 FVMEYAAGGDL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIK 122
VMEY G L + H R + Y++ + G++YL R ++R ++ I
Sbjct: 91 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR---DLAARNI- 146
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE----- 177
+ ++E +VKIADFGL K + D+ P
Sbjct: 147 ---------------------LVESEAHVKIADFGLAK--LLPLDKDYYVVREPGQSPIF 183
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
+ APE L++ ++R D W GV+++E+
Sbjct: 184 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + C + APE + T YT ++D W G
Sbjct: 153 LLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGC 211
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 212 VLAELLLGQPIFPGD 226
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + C + APE + T YT ++D W G
Sbjct: 154 LLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGC 212
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 213 VLAELLLGQPIFPGD 227
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + G+ ++ + + APE + T YT ++D W G
Sbjct: 191 LLLDPDTAVLKLCDFGSAKQ-LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 249
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 250 VLAELLLGQPIFPGD 264
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + C + APE + T YT ++D W G
Sbjct: 165 LLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGC 223
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 224 VLAELLLGQPIFPGD 238
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + C + APE + T YT ++D W G
Sbjct: 172 LLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGC 230
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 231 VLAELLLGQPIFPGD 245
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 94/243 (38%), Gaps = 44/243 (18%)
Query: 10 GEY-FAIKALKKGDIIARDEVESLLSEKRIFEVANTM---RHPFLVNLFACFQTEAHVCF 65
G+Y AIK +K+G +SE E A M H LV L+ + +
Sbjct: 47 GQYDVAIKMIKEGS----------MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQS--NITKEEIKR 123
+ EY A G L L YL E R ++ Q + K+ +
Sbjct: 97 ITEYMANGCL------------------------LNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP-EFLAPE 182
+E + + VND +G VK++DFGL + + + + P + PE
Sbjct: 133 MEYLESKQFLHRDLAARNCLVND-QGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPE 191
Query: 183 VLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEVRY-PRFLSLEAI 240
VL + ++ D W GVL++E+ +G+ P+ E + I Y P S +
Sbjct: 192 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 251
Query: 241 AIM 243
IM
Sbjct: 252 TIM 254
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + C + APE + T YT ++D W G
Sbjct: 153 LLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGC 211
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 212 VLAELLLGQPIFPGD 226
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + C + APE + T YT ++D W G
Sbjct: 161 LLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGC 219
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 220 VLAELLLGQPIFPGD 234
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + G+ ++ + + APE + T YT ++D W G
Sbjct: 232 LLLDPDTAVLKLCDFGSAKQ-LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 290
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 291 VLAELLLGQPIFPGD 305
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 33/172 (19%)
Query: 66 VMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNIT 117
+ME AGGDL + S+P ++ A + G QYL E+ I+R
Sbjct: 126 LMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR------ 179
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGT 175
+I +++ LT KI DFG+ ++ + + G
Sbjct: 180 --DI--------------AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 275
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 34/150 (22%)
Query: 65 FVMEYAAGGDL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIK 122
VMEY G L + H R + Y++ + G++YL R ++R ++ I
Sbjct: 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR---DLAARNI- 158
Query: 123 RIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPE----- 177
+ ++E +VKIADFGL K + D+ P
Sbjct: 159 ---------------------LVESEAHVKIADFGLAK--LLPLDKDYYVVREPGQSPIF 195
Query: 178 FLAPEVLTETSYTRAVDWWGLGVLIFEMLV 207
+ APE L++ ++R D W GV+++E+
Sbjct: 196 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 54/231 (23%)
Query: 4 SQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNL---------F 54
++ R TG+ AIK + A D V + R ++ +H ++ + +
Sbjct: 73 ARRRLTGQQVAIKKIPN----AFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY 128
Query: 55 ACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAV----FYAACVVLGLQYLHESRIIY 110
F++ V +ME DL IH+ S+P + ++ ++ GL+Y+H +++I+
Sbjct: 129 GEFKSVYVVLDLME----SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMHSAQVIH 181
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG----LCKEGMGFG 166
R ++K V EN ++ KI DFG LC
Sbjct: 182 R--------DLKPSNLLVNENCEL-----------------KIGDFGMARGLCTSPAEHQ 216
Query: 167 DRTGTFCGTPEFLAPEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
+ T + APE+ L+ YT+A+D W +G + EML FPG +
Sbjct: 217 YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 267
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 83/212 (39%), Gaps = 29/212 (13%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
R+TG+ AIK + + D V ++ + I + ++HP LVNL F+ + + V
Sbjct: 25 RDTGQIVAIKKFLESE---DDPVIKKIALREI-RMLKQLKHPNLVNLLEVFRRKRRLHLV 80
Query: 67 MEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEA 126
EY D + D + R V + Q L ++ N ++K
Sbjct: 81 FEYC---DHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHK--HNCIHRDVK---- 129
Query: 127 KVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLT- 185
EN + IKL DFG + G D T + +PE+L
Sbjct: 130 --PENILITKHSVIKL-----------CDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 186 ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE 217
+T Y VD W +G + E+L G +PG +
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD 208
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + C + APE + T YT ++D W G
Sbjct: 165 LLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGC 223
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 224 VLAELLLGQPIFPGD 238
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + C + APE + T YT ++D W G
Sbjct: 157 LLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGC 215
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 216 VLAELLLGQPIFPGD 230
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 32/167 (19%)
Query: 53 LFACFQTEAHVCFVMEYAAGGDLMMHIHAD--VFSEPRAVFYAACVVLGLQYLHESRIIY 110
LF + T+ ++ V ++ G L H+H F + + A G+ YLH II+
Sbjct: 96 LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC--KEGMGFGDR 168
R ++K + E LT VKI DFGL K +
Sbjct: 156 R--------DMKSNNIFLHEG----------LT-------VKIGDFGLATVKSRWSGSQQ 190
Query: 169 TGTFCGTPEFLAPEVLT---ETSYTRAVDWWGLGVLIFEMLVGESPF 212
G+ ++APEV+ ++ D + G++++E++ GE P+
Sbjct: 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGV 200
L ++ +K+ DFG K+ + C + APE + T YT ++D W G
Sbjct: 187 LLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELIFGATDYTSSIDVWSAGC 245
Query: 201 LIFEMLVGESPFPGD 215
++ E+L+G+ FPGD
Sbjct: 246 VLAELLLGQPIFPGD 260
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 48/245 (19%)
Query: 10 GEY-FAIKALKKGDIIARDEVESLLSEKRIFEVANTM---RHPFLVNLFACFQTEAHVCF 65
G+Y AIK +K+G +SE E A M H LV L+ + +
Sbjct: 27 GQYDVAIKMIKEGS----------MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 76
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQS--NITKEEIKR 123
+ EY A G L L YL E R ++ Q + K+ +
Sbjct: 77 ITEYMANGCL------------------------LNYLREMRHRFQTQQLLEMCKDVCEA 112
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLA 180
+E + + VND +G VK++DFGL + + D + G+ +
Sbjct: 113 MEYLESKQFLHRDLAARNCLVND-QGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSP 169
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEVRY-PRFLSLE 238
PEVL + ++ D W GVL++E+ +G+ P+ E + I Y P S +
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 229
Query: 239 AIAIM 243
IM
Sbjct: 230 VYTIM 234
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 96 VVLGLQYLHESRIIYR--PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKI 153
+ G+ Y+H ++I+R SNI + V++ Q VKI
Sbjct: 145 ITKGVDYIHSKKLIHRDLKPSNI---------------FLVDTKQ------------VKI 177
Query: 154 ADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML 206
DFGL G RT + GT +++PE ++ Y + VD + LG+++ E+L
Sbjct: 178 GDFGLVTSLKNDGKRTRS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 48/245 (19%)
Query: 10 GEY-FAIKALKKGDIIARDEVESLLSEKRIFEVANTM---RHPFLVNLFACFQTEAHVCF 65
G+Y AIK +K+G +SE E A M H LV L+ + +
Sbjct: 32 GQYDVAIKMIKEGS----------MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 81
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQS--NITKEEIKR 123
+ EY A G L L YL E R ++ Q + K+ +
Sbjct: 82 ITEYMANGCL------------------------LNYLREMRHRFQTQQLLEMCKDVCEA 117
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLA 180
+E + + VND +G VK++DFGL + + D + G+ +
Sbjct: 118 MEYLESKQFLHRDLAARNCLVND-QGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSP 174
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEVRY-PRFLSLE 238
PEVL + ++ D W GVL++E+ +G+ P+ E + I Y P S +
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 234
Query: 239 AIAIM 243
IM
Sbjct: 235 VYTIM 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 33/173 (19%)
Query: 65 FVMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNI 116
++E AGGDL + S+P ++ A + G QYL E+ I+R +I
Sbjct: 137 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR---DI 193
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+++ LT KI DFG+ ++ + + G
Sbjct: 194 -------------------AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 234
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 235 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 287
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 54/231 (23%)
Query: 4 SQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNL---------F 54
++ R TG+ AIK + A D V + R ++ +H ++ + +
Sbjct: 74 ARRRLTGQQVAIKKIPN----AFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY 129
Query: 55 ACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAV----FYAACVVLGLQYLHESRIIY 110
F++ V +ME DL IH+ S+P + ++ ++ GL+Y+H +++I+
Sbjct: 130 GEFKSVYVVLDLME----SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMHSAQVIH 182
Query: 111 RPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG----LCKEGMGFG 166
R ++K V EN ++ KI DFG LC
Sbjct: 183 R--------DLKPSNLLVNENCEL-----------------KIGDFGMARGLCTSPAEHQ 217
Query: 167 DRTGTFCGTPEFLAPEV-LTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD 216
+ T + APE+ L+ YT+A+D W +G + EML FPG +
Sbjct: 218 YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 268
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 48/245 (19%)
Query: 10 GEY-FAIKALKKGDIIARDEVESLLSEKRIFEVANTM---RHPFLVNLFACFQTEAHVCF 65
G+Y AIK +K+G +SE E A M H LV L+ + +
Sbjct: 31 GQYDVAIKMIKEGS----------MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 80
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQS--NITKEEIKR 123
+ EY A G L L YL E R ++ Q + K+ +
Sbjct: 81 ITEYMANGCL------------------------LNYLREMRHRFQTQQLLEMCKDVCEA 116
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLA 180
+E + + VND +G VK++DFGL + + D + G+ +
Sbjct: 117 MEYLESKQFLHRDLAARNCLVND-QGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSP 173
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEVRY-PRFLSLE 238
PEVL + ++ D W GVL++E+ +G+ P+ E + I Y P S +
Sbjct: 174 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 233
Query: 239 AIAIM 243
IM
Sbjct: 234 VYTIM 238
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 86/222 (38%), Gaps = 38/222 (17%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + LSE I HP ++ L V + E+ G
Sbjct: 48 AIKTLKGG--YTERQRREFLSEASIM---GQFEHPNIIRLEGVVTNSMPVMILTEFMENG 102
Query: 74 --DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
D + ++ F+ + V + G++YL E ++R + N
Sbjct: 103 ALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLA--------------ARN 148
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK---EGMGFGDRTGTFCGT-P-EFLAPEVLTE 186
VNS+ K++DFGL + E T + G P + APE +
Sbjct: 149 ILVNSNL-----------VCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 187 TSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVND 227
+T A D W G++++E M GE P+ ++V ++I D
Sbjct: 198 RKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQD 239
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 94/238 (39%), Gaps = 54/238 (22%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFE--VANTMRHPFLVNLFACFQTEAHVCFVMEYAA 71
AIK LK D+ E L E+ E + ++HP +V L + + + Y +
Sbjct: 60 AIKTLK-------DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCS 112
Query: 72 GGDL-----MMHIHADVFS------------EPRAVFYAACVVLGLQYLHESRIIYRPQS 114
GDL M H+DV S P V A + G++YL ++++
Sbjct: 113 HGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHK--- 169
Query: 115 NITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTF 172
++ + + K+N VKI+D GL +E + G
Sbjct: 170 DLATRNVLVYD-------KLN---------------VKISDLGLFREVYAADYYKLLGNS 207
Query: 173 CGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEV 229
++APE + ++ D W GV+++E+ G P+ G ++V + I N +V
Sbjct: 208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 265
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 33/173 (19%)
Query: 65 FVMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNI 116
++E AGGDL + S+P ++ A + G QYL E+ I+R
Sbjct: 117 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR----- 171
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+I +++ LT KI DFG+ ++ + + G
Sbjct: 172 ---DI--------------AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 214
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 215 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 267
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 48/245 (19%)
Query: 10 GEY-FAIKALKKGDIIARDEVESLLSEKRIFEVANTM---RHPFLVNLFACFQTEAHVCF 65
G+Y AIK +K+G +SE E A M H LV L+ + +
Sbjct: 38 GQYDVAIKMIKEGS----------MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 87
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQS--NITKEEIKR 123
+ EY A G L L YL E R ++ Q + K+ +
Sbjct: 88 ITEYMANGCL------------------------LNYLREMRHRFQTQQLLEMCKDVCEA 123
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLA 180
+E + + VND +G VK++DFGL + + D + G+ +
Sbjct: 124 MEYLESKQFLHRDLAARNCLVND-QGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSP 180
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEVRY-PRFLSLE 238
PEVL + ++ D W GVL++E+ +G+ P+ E + I Y P S +
Sbjct: 181 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 240
Query: 239 AIAIM 243
IM
Sbjct: 241 VYTIM 245
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 33/173 (19%)
Query: 65 FVMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNI 116
++E AGGDL + S+P ++ A + G QYL E+ I+R
Sbjct: 127 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR----- 181
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+I +++ LT KI DFG+ ++ + + G
Sbjct: 182 ---DI--------------AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 224
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 225 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 277
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 33/173 (19%)
Query: 65 FVMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNI 116
++E AGGDL + S+P ++ A + G QYL E+ I+R
Sbjct: 111 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR----- 165
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+I +++ LT KI DFG+ ++ + + G
Sbjct: 166 ---DI--------------AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 261
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 33/173 (19%)
Query: 65 FVMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNI 116
++E AGGDL + S+P ++ A + G QYL E+ I+R
Sbjct: 111 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR----- 165
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+I +++ LT KI DFG+ ++ + + G
Sbjct: 166 ---DI--------------AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 261
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 94/238 (39%), Gaps = 54/238 (22%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFE--VANTMRHPFLVNLFACFQTEAHVCFVMEYAA 71
AIK LK D+ E L E+ E + ++HP +V L + + + Y +
Sbjct: 43 AIKTLK-------DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCS 95
Query: 72 GGDL-----MMHIHADVFS------------EPRAVFYAACVVLGLQYLHESRIIYRPQS 114
GDL M H+DV S P V A + G++YL ++++
Sbjct: 96 HGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHK--- 152
Query: 115 NITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTF 172
++ + + K+N VKI+D GL +E + G
Sbjct: 153 DLATRNVLVYD-------KLN---------------VKISDLGLFREVYAADYYKLLGNS 190
Query: 173 CGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEV 229
++APE + ++ D W GV+++E+ G P+ G ++V + I N +V
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 248
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 33/173 (19%)
Query: 65 FVMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNI 116
++E AGGDL + S+P ++ A + G QYL E+ I+R
Sbjct: 110 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR----- 164
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+I +++ LT KI DFG+ ++ + + G
Sbjct: 165 ---DI--------------AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 260
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 48/245 (19%)
Query: 10 GEY-FAIKALKKGDIIARDEVESLLSEKRIFEVANTM---RHPFLVNLFACFQTEAHVCF 65
G+Y AIK +K+G +SE E A M H LV L+ + +
Sbjct: 47 GQYDVAIKMIKEGS----------MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQS--NITKEEIKR 123
+ EY A G L L YL E R ++ Q + K+ +
Sbjct: 97 ITEYMANGCL------------------------LNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLA 180
+E + + VND +G VK++DFGL + + D + G+ +
Sbjct: 133 MEYLESKQFLHRDLAARNCLVND-QGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSP 189
Query: 181 PEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEVRY-PRFLSLE 238
PEVL + ++ D W GVL++E+ +G+ P+ E + I Y P S +
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 249
Query: 239 AIAIM 243
IM
Sbjct: 250 VYTIM 254
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 33/173 (19%)
Query: 65 FVMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNI 116
++E AGGDL + S+P ++ A + G QYL E+ I+R
Sbjct: 125 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR----- 179
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+I +++ LT KI DFG+ ++ + + G
Sbjct: 180 ---DI--------------AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 275
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 33/172 (19%)
Query: 66 VMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNIT 117
++E AGGDL + S+P ++ A + G QYL E+ I+R
Sbjct: 126 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR------ 179
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGT 175
+I +++ LT KI DFG+ ++ + + G
Sbjct: 180 --DI--------------AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 275
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 82/217 (37%), Gaps = 36/217 (16%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIKALK G + LSE I HP ++ L V EY G
Sbjct: 81 AIKALKAG--YTERQRRDFLSEASIM---GQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 74 --DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
D + H F+ + V V G++YL + ++R ++ +
Sbjct: 136 SLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHR---DLAARNV---------- 182
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETS 188
+ D+ K++DFGL + D T G + APE + +
Sbjct: 183 ------------LVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ A D W GV+++E+L GE P+ +V S+
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 90/241 (37%), Gaps = 35/241 (14%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK AR + R E+ ++H +V + + V EY G
Sbjct: 47 AVKTLKDASDNARKDFH------REAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYK 133
DL + A P AV A P + +T+ ++ I ++
Sbjct: 101 DLNKFLRA---HGPDAVLMAEG---------------NPPTELTQSQMLHIAQQIAAGMV 142
Query: 134 VNSSQEI----KLTVNDTEG---YVKIADFGLCKEGMGFGD-RTGTFCGTP-EFLAPEVL 184
+SQ T N G VKI DFG+ ++ R G P ++ PE +
Sbjct: 143 YLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI 202
Query: 185 TETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEV-RYPRFLSLEAIAI 242
+T D W LGV+++E+ G+ P+ EV + I V + PR E +
Sbjct: 203 MYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYEL 262
Query: 243 M 243
M
Sbjct: 263 M 263
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ +
Sbjct: 159 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 217
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 218 LFPGRDYIDQWNKVI 232
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 33/172 (19%)
Query: 66 VMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNIT 117
++E AGGDL + S+P ++ A + G QYL E+ I+R
Sbjct: 103 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR------ 156
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGT 175
+I +++ LT KI DFG+ ++ + + G
Sbjct: 157 --DI--------------AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 200
Query: 176 PEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 252
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 33/173 (19%)
Query: 65 FVMEYAAGGDLMMHIHA--DVFSEPRAV------FYAACVVLGLQYLHESRIIYRPQSNI 116
++E AGGDL + S+P ++ A + G QYL E+ I+R
Sbjct: 111 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR----- 165
Query: 117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCG 174
+I +++ LT KI DFG+ ++ + + G
Sbjct: 166 ---DI--------------AARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML 208
Query: 175 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVN 226
+++ PE E +T D W GVL++E+ +G P+P +EV + + +
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 261
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 86/222 (38%), Gaps = 38/222 (17%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + LSE I HP ++ L V + E+ G
Sbjct: 46 AIKTLKGG--YTERQRREFLSEASIM---GQFEHPNIIRLEGVVTNSMPVMILTEFMENG 100
Query: 74 --DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
D + ++ F+ + V + G++YL E ++R + N
Sbjct: 101 ALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLA--------------ARN 146
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK---EGMGFGDRTGTFCGT-P-EFLAPEVLTE 186
VNS+ K++DFGL + E T + G P + APE +
Sbjct: 147 ILVNSNL-----------VCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 187 TSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVND 227
+T A D W G++++E M GE P+ ++V ++I D
Sbjct: 196 RKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQD 237
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ +
Sbjct: 170 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 228
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 229 LFPGRDYIDQWNKVI 243
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 86/224 (38%), Gaps = 38/224 (16%)
Query: 12 YFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAA 71
+ AIK LK G + LSE I HP +++L V + E+
Sbjct: 37 FVAIKTLKSG--YTEKQRRDFLSEASIM---GQFDHPNVIHLEGVVTKSTPVMIITEFME 91
Query: 72 GGDL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQ 129
G L + + F+ + V + G++YL + ++R A
Sbjct: 92 NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHR--------------ALAA 137
Query: 130 ENYKVNSSQEIKLTVNDTEGYVKIADFGLCK---EGMGFGDRTGTFCGT-P-EFLAPEVL 184
N VNS+ K++DFGL + + T G P + APE +
Sbjct: 138 RNILVNSNL-----------VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 185 TETSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVND 227
+T A D W G++++E M GE P+ ++V ++I D
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQD 230
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 32/198 (16%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVL 98
+ +M HP LV L + + V + G L+ +H H D + + +
Sbjct: 93 IMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAK 151
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YL E R+++R + N V S +VKI DFGL
Sbjct: 152 GMMYLEERRLVHRDLA--------------ARNVLVKSPN-----------HVKITDFGL 186
Query: 159 CKEGMGFGDRTGTFCGT-P-EFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGD 215
+ G G P +++A E + +T D W GV I+E++ G P+ G
Sbjct: 187 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 246
Query: 216 DEEEVFDSIVNDEVRYPR 233
E+ D + E R P+
Sbjct: 247 PTREIPDLLEKGE-RLPQ 263
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 32/198 (16%)
Query: 41 VANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLM--MHIHADVFSEPRAVFYAACVVL 98
+ +M HP LV L + + V + G L+ +H H D + + +
Sbjct: 70 IMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAK 128
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YL E R+++R + N V S +VKI DFGL
Sbjct: 129 GMMYLEERRLVHRDLA--------------ARNVLVKSPN-----------HVKITDFGL 163
Query: 159 CKEGMGFGDRTGTFCGT-P-EFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGD 215
+ G G P +++A E + +T D W GV I+E++ G P+ G
Sbjct: 164 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 223
Query: 216 DEEEVFDSIVNDEVRYPR 233
E+ D + E R P+
Sbjct: 224 PTREIPDLLEKGE-RLPQ 240
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 93/243 (38%), Gaps = 44/243 (18%)
Query: 10 GEY-FAIKALKKGDIIARDEVESLLSEKRIFEVANTM---RHPFLVNLFACFQTEAHVCF 65
G+Y AIK +K+G +SE E A M H LV L+ + +
Sbjct: 32 GQYDVAIKMIKEGS----------MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 81
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQS--NITKEEIKR 123
+ EY A G L L YL E R ++ Q + K+ +
Sbjct: 82 ITEYMANGCL------------------------LNYLREMRHRFQTQQLLEMCKDVCEA 117
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP-EFLAPE 182
+E + + VND +G VK++DFGL + + + P + PE
Sbjct: 118 MEYLESKQFLHRDLAARNCLVND-QGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPE 176
Query: 183 VLTETSYTRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEVRY-PRFLSLEAI 240
VL + ++ D W GVL++E+ +G+ P+ E + I Y P S +
Sbjct: 177 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 236
Query: 241 AIM 243
IM
Sbjct: 237 TIM 239
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV-LTETSYTRAVDWWGLGV 200
L VN + +K+ DFG K+ + C + APE+ L T YT ++D W +G
Sbjct: 172 LLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSR-FYRAPELMLGATEYTPSIDLWSIGC 230
Query: 201 LIFEMLVGESPFPGD 215
+ E+++G+ F G+
Sbjct: 231 VFGELILGKPLFSGE 245
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 147 TEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML 206
++ +KI DFGL + G + T + APEV+ Y VD W +G ++ EM+
Sbjct: 161 SDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Query: 207 VGESPFPGDDEEEVFDSIV 225
+ FPG D + ++ ++
Sbjct: 220 RHKILFPGRDYIDQWNKVI 238
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 50 LVNLFACFQTE---AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHES 106
L+N+F +T V VME +L I ++ E R + ++ G+++LH +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQMELDHE-RMSYLLYQMLXGIKHLHSA 145
Query: 107 RIIYR--PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMG 164
II+R SNI V ++ +KI DFGL + G
Sbjct: 146 GIIHRDLKPSNI---------------------------VVKSDXTLKILDFGLARTA-G 177
Query: 165 FGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
+ T + APEV+ Y VD W +G ++ EM+ + FPG D + ++ +
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 237
Query: 225 V 225
+
Sbjct: 238 I 238
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 147 TEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML 206
++ +KI DFGL + G + T + APEV+ Y VD W +G ++ EM+
Sbjct: 161 SDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Query: 207 VGESPFPGDDEEEVFDSIV 225
+ FPG D + ++ ++
Sbjct: 220 RHKILFPGRDYIDQWNKVI 238
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 82/217 (37%), Gaps = 36/217 (16%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIKALK G + LSE I HP ++ L V EY G
Sbjct: 81 AIKALKAG--YTERQRRDFLSEASIM---GQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 74 --DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
D + H F+ + V V G++YL + ++R ++ +
Sbjct: 136 SLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHR---DLAARNV---------- 182
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETS 188
+ D+ K++DFGL + D T G + APE + +
Sbjct: 183 ------------LVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSI 224
++ A D W GV+++E+L GE P+ +V S+
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 147 TEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML 206
++ +KI DFGL + G + T + APEV+ Y VD W +G ++ EM+
Sbjct: 161 SDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Query: 207 VGESPFPGDDEEEVFDSIV 225
+ FPG D + ++ ++
Sbjct: 220 RHKILFPGRDYIDQWNKVI 238
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 147 TEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML 206
++ +KI DFGL + G + T + APEV+ Y VD W +G ++ EM+
Sbjct: 154 SDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
Query: 207 VGESPFPGDDEEEVFDSIV 225
+ FPG D + ++ ++
Sbjct: 213 RHKILFPGRDYIDQWNKVI 231
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ +
Sbjct: 159 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 218 LFPGRDYIDQWNKVI 232
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ +
Sbjct: 158 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 216
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 217 LFPGRDYIDQWNKVI 231
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ +
Sbjct: 166 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 224
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 225 LFPGRDYIDQWNKVI 239
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ +
Sbjct: 165 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 224 LFPGRDYIDQWNKVI 238
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ +
Sbjct: 165 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 224 LFPGRDYIDQWNKVI 238
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ +
Sbjct: 159 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 218 LFPGRDYIDQWNKVI 232
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ +
Sbjct: 164 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 222
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 223 LFPGRDYIDQWNKVI 237
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ +
Sbjct: 166 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 224
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 225 LFPGRDYIDQWNKVI 239
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ +
Sbjct: 203 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 262 LFPGRDYIDQWNKVI 276
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 91/227 (40%), Gaps = 59/227 (25%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF--- 57
V +++R G+ + IK +K + A EV++L + H +V+ C+
Sbjct: 27 VFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAK----------LDHVNIVHYNGCWDGF 76
Query: 58 ------------QTEAHVCFV-MEYAAGGDLMMHI---HADVFSEPRAVFYAACVVLGLQ 101
+++ F+ ME+ G L I + + A+ + G+
Sbjct: 77 DYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVD 136
Query: 102 YLHESRIIYR--PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC 159
Y+H ++I R SNI + V++ Q VKI DFGL
Sbjct: 137 YIHSKKLINRDLKPSNI---------------FLVDTKQ------------VKIGDFGLV 169
Query: 160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML 206
G R + GT +++PE ++ Y + VD + LG+++ E+L
Sbjct: 170 TSLKNDGKRXRS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 91/247 (36%), Gaps = 44/247 (17%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+KALK + AR + + R E+ ++H +V + + V EY G
Sbjct: 49 AVKALKDPTLAARKDFQ------REAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 102
Query: 74 DLMMHIHAD-------VFSEPRAVFYAACVVLGL-QYLH-----ESRIIYRPQSNITKEE 120
DL + A V +PR A LGL Q LH S ++Y + +
Sbjct: 103 DLNKFLRAHGPDAMILVDGQPR----QAKGELGLSQMLHIASQIASGMVYLASQHFVHRD 158
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFG-DRTGTFCGTP-EF 178
+ V N VKI DFG+ ++ R G P +
Sbjct: 159 LATRNCLVGANL-----------------LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 201
Query: 179 LAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEV-RYPRFLS 236
+ PE + +T D W GV+++E+ G+ P+ EV + I V PR
Sbjct: 202 MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCP 261
Query: 237 LEAIAIM 243
E +M
Sbjct: 262 KEVYDVM 268
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 19/238 (7%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK + E E+L+SE ++ H +VNL + EY G
Sbjct: 57 AVKMLKPSAHLT--EREALMSELKVLSYLGN--HMNIVNLLGACTIGGPTLVITEYCCYG 112
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
DL+ + R F + + E + + + + K + +N
Sbjct: 113 DLL-----NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI 167
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRT--GTFCGTPEFLAPEVLTETSY 189
++ +++ I LT KI DFGL ++ + G +++APE + Y
Sbjct: 168 HRDLAARNILLTHGRI---TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY 224
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEVRY--PRFLSLEAIAIMR 244
T D W G+ ++E+ +G SP+PG + F ++ + R P E IM+
Sbjct: 225 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 282
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 19/238 (7%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK + E E+L+SE ++ H +VNL + EY G
Sbjct: 80 AVKMLKPSAHLT--EREALMSELKVLSYLGN--HMNIVNLLGACTIGGPTLVITEYCCYG 135
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
DL+ + R F + + E + + + + K + +N
Sbjct: 136 DLL-----NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI 190
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRT--GTFCGTPEFLAPEVLTETSY 189
++ +++ I LT KI DFGL ++ + G +++APE + Y
Sbjct: 191 HRDLAARNILLTHGRI---TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY 247
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEVRY--PRFLSLEAIAIMR 244
T D W G+ ++E+ +G SP+PG + F ++ + R P E IM+
Sbjct: 248 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 305
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 19/238 (7%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK + E E+L+SE ++ H +VNL + EY G
Sbjct: 75 AVKMLKPSAHLT--EREALMSELKVLSYLGN--HMNIVNLLGACTIGGPTLVITEYCCYG 130
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
DL+ + R F + + E + + + + K + +N
Sbjct: 131 DLL-----NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI 185
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRT--GTFCGTPEFLAPEVLTETSY 189
++ +++ I LT KI DFGL ++ + G +++APE + Y
Sbjct: 186 HRDLAARNILLTHGRI---TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY 242
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEVRY--PRFLSLEAIAIMR 244
T D W G+ ++E+ +G SP+PG + F ++ + R P E IM+
Sbjct: 243 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 300
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 19/238 (7%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK + E E+L+SE ++ H +VNL + EY G
Sbjct: 73 AVKMLKPSAHLT--EREALMSELKVLSYLGN--HMNIVNLLGACTIGGPTLVITEYCCYG 128
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
DL+ + R F + + E + + + + K + +N
Sbjct: 129 DLL-----NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI 183
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRT--GTFCGTPEFLAPEVLTETSY 189
++ +++ I LT KI DFGL ++ + G +++APE + Y
Sbjct: 184 HRDLAARNILLTHGRI---TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY 240
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEVRY--PRFLSLEAIAIMR 244
T D W G+ ++E+ +G SP+PG + F ++ + R P E IM+
Sbjct: 241 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 298
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 97/254 (38%), Gaps = 66/254 (25%)
Query: 10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF------------ 57
Y+AIK ++ + +++ ++LSE + ++ H ++V +A +
Sbjct: 31 SRYYAIKKIRHTE----EKLSTILSEVXLLA---SLNHQYVVRYYAAWLERRNFVKPXTA 83
Query: 58 -QTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYA--ACVVLGLQYLHESRIIYRPQS 114
+ ++ + EY L IH++ ++ R ++ ++ L Y+H II+R
Sbjct: 84 VKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHR--- 140
Query: 115 NITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGM----------- 163
N+ I D VKI DFGL K
Sbjct: 141 NLKPXNI----------------------FIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 164 ---GFGDRTGTFCGTPEFLAPEVLTETS-YTRAVDWWGLGVLIFEMLVGESPFP-GDDEE 218
G D + GT ++A EVL T Y +D + LG++ FE + PF G +
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERV 235
Query: 219 EVFDSIVNDEVRYP 232
+ + + + +P
Sbjct: 236 NILKKLRSVSIEFP 249
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPE-----FLAPEVLTETSYTRAVDWWGLGVLIFEM 205
+KI DFGL + +F PE + APEV+ Y VD W +G ++ EM
Sbjct: 165 LKILDFGLARTA------GTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 218
Query: 206 LVGESPFPGDDEEEVFDSIV 225
+ + FPG D + ++ ++
Sbjct: 219 VCHKILFPGRDYIDQWNKVI 238
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGES 210
+KI DFGL + G + T + APEV+ Y VD W +G ++ EM+ +
Sbjct: 203 LKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261
Query: 211 PFPGDDEEEVFDSIV 225
FPG D + ++ ++
Sbjct: 262 LFPGRDYIDQWNKVI 276
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 33/134 (24%)
Query: 96 VVLGLQYLHESRIIYR---PQSNITKEEIKRIEAKVQ---ENYKVNSSQEIKLTVNDTEG 149
+ G+ +LH +II+R PQ NI R A Q EN ++
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQ-NILVSTSSRFTADQQTGAENLRI--------------- 185
Query: 150 YVKIADFGLCKE----GMGFGDRTGTFCGTPEFLAPEVLTETS---YTRAVDWWGLGVLI 202
I+DFGLCK+ F GT + APE+L E++ TR++D + +G +
Sbjct: 186 --LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
Query: 203 FEMLV-GESPFPGD 215
+ +L G+ PF GD
Sbjct: 244 YYILSKGKHPF-GD 256
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 33/134 (24%)
Query: 96 VVLGLQYLHESRIIYR---PQSNITKEEIKRIEAKVQ---ENYKVNSSQEIKLTVNDTEG 149
+ G+ +LH +II+R PQ NI R A Q EN ++
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQ-NILVSTSSRFTADQQTGAENLRI--------------- 185
Query: 150 YVKIADFGLCKE----GMGFGDRTGTFCGTPEFLAPEVLTETS---YTRAVDWWGLGVLI 202
I+DFGLCK+ F GT + APE+L E++ TR++D + +G +
Sbjct: 186 --LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
Query: 203 FEMLV-GESPFPGD 215
+ +L G+ PF GD
Sbjct: 244 YYILSKGKHPF-GD 256
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 19/238 (7%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+K LK + E E+L+SE ++ H +VNL + EY G
Sbjct: 80 AVKMLKPSAHLT--EREALMSELKVLSYLGN--HMNIVNLLGACTIGGPTLVITEYCCYG 135
Query: 74 DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN-- 131
DL+ + R F + + E + + + + K + +N
Sbjct: 136 DLL-----NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI 190
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRT--GTFCGTPEFLAPEVLTETSY 189
++ +++ I LT KI DFGL + + G +++APE + Y
Sbjct: 191 HRDLAARNILLTHGRI---TKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVY 247
Query: 190 TRAVDWWGLGVLIFEML-VGESPFPGDDEEEVFDSIVNDEVRY--PRFLSLEAIAIMR 244
T D W G+ ++E+ +G SP+PG + F ++ + R P E IM+
Sbjct: 248 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 305
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 151 VKIADFGLCKEGMGFGDRTGTFCGTPE-----FLAPEVLTETSYTRAVDWWGLGVLIFEM 205
+KI DFGL + +F PE + APEV+ Y VD W +G ++ EM
Sbjct: 165 LKILDFGLARTA------GTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 206 LVGESPFPGDDEEEVFDSIV 225
+ + FPG D + ++ ++
Sbjct: 219 VCHKILFPGRDYIDQWNKVI 238
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 45/186 (24%)
Query: 50 LVNLFACFQTE---AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHES 106
L+N+F +T V VME +L IH ++ E R + ++ G+++LH +
Sbjct: 86 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHE-RMSYLLYQMLCGIKHLHSA 143
Query: 107 RIIYR--PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMG 164
II+R SNI V ++ +KI DFGL +
Sbjct: 144 GIIHRDLKPSNI---------------------------VVKSDCTLKILDFGLARTA-- 174
Query: 165 FGDRTGTFCGTPE-----FLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 219
+ F TP + APEV+ Y VD W +G ++ E++ G F G D +
Sbjct: 175 ----STNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID 230
Query: 220 VFDSIV 225
++ ++
Sbjct: 231 QWNKVI 236
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 152 KIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLGVLIFE-MLV 207
K++DFGL + + T T G + APE ++ +T A D W G++++E M
Sbjct: 187 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTY 246
Query: 208 GESPFPGDDEEEVFDSIVNDEVRYP 232
GE P+ EV +I ND R P
Sbjct: 247 GERPYWELSNHEVMKAI-NDGFRLP 270
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 151 VKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-V 207
VKI DFG+ ++ + + G ++APE L + +T + D W GV+++E+ +
Sbjct: 169 VKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 228
Query: 208 GESPFPGDDEEEVFDSIVN 226
E P+ G E+V +++
Sbjct: 229 AEQPYQGLSNEQVLKFVMD 247
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 86/224 (38%), Gaps = 38/224 (16%)
Query: 12 YFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAA 71
+ AIK LK G + LSE I HP +++L V + E+
Sbjct: 63 FVAIKTLKSG--YTEKQRRDFLSEASIM---GQFDHPNVIHLEGVVTKSTPVMIITEFME 117
Query: 72 GGDL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQ 129
G L + + F+ + V + G++YL + ++R +
Sbjct: 118 NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLA--------------A 163
Query: 130 ENYKVNSSQEIKLTVNDTEGYVKIADFGLCK---EGMGFGDRTGTFCGT-P-EFLAPEVL 184
N VNS+ K++DFGL + + T G P + APE +
Sbjct: 164 RNILVNSNL-----------VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 185 TETSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVND 227
+T A D W G++++E M GE P+ ++V ++I D
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQD 256
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 35/194 (18%)
Query: 30 ESLLSEKRIFEV--ANTMRHPFLVNL---FACFQTEA-HVCFVMEYAAGGDLMMHIHAD- 82
+S L ++ + E+ N HP ++ L F F+ A H +++ DL IH
Sbjct: 69 DSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR 128
Query: 83 -VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIK 141
V S ++ ++LGL LHE+ +++R ++ +
Sbjct: 129 IVISPQHIQYFMYHILLGLHVLHEAGVVHR---------------------DLHPGNILL 167
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGV 200
ND + I DF L +E ++T + + APE++ + +T+ VD W G
Sbjct: 168 ADNND----ITICDFNLAREDTADANKTH-YVTHRWYRAPELVMQFKGFTKLVDMWSAGC 222
Query: 201 LIFEMLVGESPFPG 214
++ EM ++ F G
Sbjct: 223 VMAEMFNRKALFRG 236
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 66/179 (36%), Gaps = 32/179 (17%)
Query: 40 EVANTMRHPFLVNLFACFQTEAH----VCFVMEYAAGGDLMMHIHADVFSEPRAVFYAAC 95
E ++HP +V + +++ + V E G L ++ + + V + C
Sbjct: 77 EXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIK-VLRSWC 135
Query: 96 --VVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKI 153
++ GLQ+LH R + + K ++ + + G VKI
Sbjct: 136 RQILKGLQFLH-----------------TRTPPIIHRDLKCDN-----IFITGPTGSVKI 173
Query: 154 ADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 212
D GL + GTPEF APE E Y +VD + G E E P+
Sbjct: 174 GDLGLAT--LKRASFAKAVIGTPEFXAPEXY-EEKYDESVDVYAFGXCXLEXATSEYPY 229
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 35/194 (18%)
Query: 30 ESLLSEKRIFEV--ANTMRHPFLVNL---FACFQTEA-HVCFVMEYAAGGDLMMHIHAD- 82
+S L ++ + E+ N HP ++ L F F+ A H +++ DL IH
Sbjct: 69 DSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR 128
Query: 83 -VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIK 141
V S ++ ++LGL LHE+ +++R ++ +
Sbjct: 129 IVISPQHIQYFMYHILLGLHVLHEAGVVHR---------------------DLHPGNILL 167
Query: 142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGV 200
ND + I DF L +E ++T + + APE++ + +T+ VD W G
Sbjct: 168 ADNND----ITICDFNLAREDTADANKTH-YVTHRWYRAPELVMQFKGFTKLVDMWSAGC 222
Query: 201 LIFEMLVGESPFPG 214
++ EM ++ F G
Sbjct: 223 VMAEMFNRKALFRG 236
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 37/138 (26%)
Query: 96 VVLGLQYLHESRIIYR---PQSNITKEEIKRIEAKVQ---ENYKVNSSQEIKLTVNDTEG 149
+ G+ +LH +II+R PQ NI R A Q EN ++
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQ-NILVSTSSRFTADQQTGAENLRI--------------- 167
Query: 150 YVKIADFGLCKE----GMGFGDRTGTFCGTPEFLAPEVLTETS-------YTRAVDWWGL 198
I+DFGLCK+ F GT + APE+L E++ TR++D + +
Sbjct: 168 --LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSM 225
Query: 199 GVLIFEMLV-GESPFPGD 215
G + + +L G+ PF GD
Sbjct: 226 GCVFYYILSKGKHPF-GD 242
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 91/251 (36%), Gaps = 51/251 (20%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+KALK+ AR + + R E+ ++H +V F + V EY G
Sbjct: 46 AVKALKEASESARQDFQ------REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 99
Query: 74 DLMMHIHA------------DVFSEP----RAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
DL + + DV P + + A+ V G+ YL ++R +
Sbjct: 100 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT-- 157
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-RTGTFCGTP 176
N V VKI DFG+ ++ R G P
Sbjct: 158 ------------RNCLVGQGL-----------VVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 177 -EFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND-EVRYPR 233
++ PE + +T D W GV+++E+ G+ P+ E D I E+ PR
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR 254
Query: 234 FLSLEAIAIMR 244
E AIMR
Sbjct: 255 ACPPEVYAIMR 265
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 91/251 (36%), Gaps = 51/251 (20%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+KALK+ AR + + R E+ ++H +V F + V EY G
Sbjct: 52 AVKALKEASESARQDFQ------REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 105
Query: 74 DLMMHIHA------------DVFSEP----RAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
DL + + DV P + + A+ V G+ YL ++R +
Sbjct: 106 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT-- 163
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-RTGTFCGTP 176
N V VKI DFG+ ++ R G P
Sbjct: 164 ------------RNCLVGQGL-----------VVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 177 -EFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND-EVRYPR 233
++ PE + +T D W GV+++E+ G+ P+ E D I E+ PR
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR 260
Query: 234 FLSLEAIAIMR 244
E AIMR
Sbjct: 261 ACPPEVYAIMR 271
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 138 QEIKLTVNDTE--GYVKIADFGLCKEGMGFGDRTGTFCG---TPEFLAPEVLTET-SYTR 191
Q + L+V+D +KI DFGL + FG F T + PE+L + Y+
Sbjct: 161 QNLLLSVSDASETPVLKIGDFGLAR---AFGIPIRQFTHEIITLWYRPPEILLGSRHYST 217
Query: 192 AVDWWGLGVLIFEMLVGESPFPGDDE 217
+VD W + + EML+ FPGD E
Sbjct: 218 SVDIWSIACIWAEMLMKTPLFPGDSE 243
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 151 VKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-V 207
VKI DFG+ ++ + + G ++APE L + +T + D W GV+++E+ +
Sbjct: 169 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 228
Query: 208 GESPFPGDDEEEVFDSIVN 226
E P+ G E+V +++
Sbjct: 229 AEQPYQGLSNEQVLKFVMD 247
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 151 VKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-V 207
VKI DFG+ ++ + + G ++APE L + +T + D W GV+++E+ +
Sbjct: 168 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 227
Query: 208 GESPFPGDDEEEVFDSIVN 226
E P+ G E+V +++
Sbjct: 228 AEQPYQGLSNEQVLKFVMD 246
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V +M+ G L+ ++ H D
Sbjct: 55 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGXLLDYVREHKD 113
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 114 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 155
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 156 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 207
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 208 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 241
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 151 VKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-V 207
VKI DFG+ ++ + + G ++APE L + +T + D W GV+++E+ +
Sbjct: 169 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 228
Query: 208 GESPFPGDDEEEVFDSIVN 226
E P+ G E+V +++
Sbjct: 229 AEQPYQGLSNEQVLKFVMD 247
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 91/251 (36%), Gaps = 51/251 (20%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
A+KALK+ AR + + R E+ ++H +V F + V EY G
Sbjct: 75 AVKALKEASESARQDFQ------REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128
Query: 74 DLMMHIHA------------DVFSEP----RAVFYAACVVLGLQYLHESRIIYRPQSNIT 117
DL + + DV P + + A+ V G+ YL ++R +
Sbjct: 129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT-- 186
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD-RTGTFCGTP 176
N V VKI DFG+ ++ R G P
Sbjct: 187 ------------RNCLVGQGL-----------VVKIGDFGMSRDIYSTDYYRVGGRTMLP 223
Query: 177 -EFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND-EVRYPR 233
++ PE + +T D W GV+++E+ G+ P+ E D I E+ PR
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR 283
Query: 234 FLSLEAIAIMR 244
E AIMR
Sbjct: 284 ACPPEVYAIMR 294
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 151 VKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-V 207
VKI DFG+ ++ + + G ++APE L + +T + D W GV+++E+ +
Sbjct: 170 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 229
Query: 208 GESPFPGDDEEEVFDSIVN 226
E P+ G E+V +++
Sbjct: 230 AEQPYQGLSNEQVLKFVMD 248
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 37/138 (26%)
Query: 96 VVLGLQYLHESRIIYR---PQSNITKEEIKRIEAKVQ---ENYKVNSSQEIKLTVNDTEG 149
+ G+ +LH +II+R PQ NI R A Q EN ++
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQ-NILVSTSSRFTADQQTGAENLRI--------------- 167
Query: 150 YVKIADFGLCKE----GMGFGDRTGTFCGTPEFLAPEVLTETS-------YTRAVDWWGL 198
I+DFGLCK+ F GT + APE+L E++ TR++D + +
Sbjct: 168 --LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSM 225
Query: 199 GVLIFEMLV-GESPFPGD 215
G + + +L G+ PF GD
Sbjct: 226 GCVFYYILSKGKHPF-GD 242
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V +M+ G L+ ++ H D
Sbjct: 56 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKD 114
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 156
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 157 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 209 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 242
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V +M+ G L+ ++ H D
Sbjct: 55 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKD 113
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 114 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 155
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 156 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 207
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 208 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 241
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V +M+ G L+ ++ H D
Sbjct: 57 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKD 115
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 116 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 157
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 158 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 210 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 243
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V +M+ G L+ ++ H D
Sbjct: 61 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKD 119
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 120 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 161
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 162 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 214 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 247
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V +M+ G L+ ++ H D
Sbjct: 54 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKD 112
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 113 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 154
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 155 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 207 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 240
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 39/229 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 64 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 122
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 123 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 164
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 165 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 216
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR--FLSLEAIAIMRR 245
V ++E++ G P+ G E+ SI+ R P+ +++ IMR+
Sbjct: 217 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQPPICTIDVYMIMRK 264
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 39/229 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 54 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 112
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 113 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 154
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 155 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR--FLSLEAIAIMRR 245
V ++E++ G P+ G E+ SI+ R P+ +++ IMR+
Sbjct: 207 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQPPICTIDVYMIMRK 254
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 83/217 (38%), Gaps = 36/217 (16%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + L E I HP +V+L V V+E+ G
Sbjct: 75 AIKTLKVG--YTEKQRRDFLCEASIM---GQFDHPNVVHLEGVVTRGKPVMIVIEFMENG 129
Query: 74 --DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
D + H F+ + V + G++YL + ++R + N
Sbjct: 130 ALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLA--------------ARN 175
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK--EGMGFGDRTGTFCGTP-EFLAPEVLTETS 188
VNS+ K++DFGL + E T T P + APE +
Sbjct: 176 ILVNSNL-----------VCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 189 YTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSI 224
+T A D W G++++E M GE P+ ++V +I
Sbjct: 225 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 261
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V +M+ G L+ ++ H D
Sbjct: 58 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKD 116
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 117 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 158
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 159 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 210
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 211 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 244
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 81/227 (35%), Gaps = 54/227 (23%)
Query: 47 HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI------------HADVFSEPRA----- 89
+P +V L +C + EY A GDL + H+D+ + R
Sbjct: 109 NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 90 --------VFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIK 141
+ A V G+ YL E + ++R ++ V EN
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLSERKFVHR--------DLATRNCLVGENM--------- 211
Query: 142 LTVNDTEGYVKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLG 199
VKIADFGL + + G ++ PE + YT D W G
Sbjct: 212 --------VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYG 263
Query: 200 VLIFEML-VGESPFPGDDEEEVFDSIVNDEV-RYPRFLSLEAIAIMR 244
V+++E+ G P+ G EEV + + + P LE +MR
Sbjct: 264 VVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMR 310
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 151 VKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-V 207
VKI DFG+ ++ + G ++APE L + +T + D W GV+++E+ +
Sbjct: 166 VKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 225
Query: 208 GESPFPGDDEEEVFDSIVN 226
E P+ G E+V +++
Sbjct: 226 AEQPYQGLSNEQVLKFVMD 244
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 151 VKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-V 207
VKI DFG+ ++ + G ++APE L + +T + D W GV+++E+ +
Sbjct: 169 VKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 228
Query: 208 GESPFPGDDEEEVFDSIVN 226
E P+ G E+V +++
Sbjct: 229 AEQPYQGLSNEQVLKFVMD 247
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 39/229 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V +M+ G L+ ++ H D
Sbjct: 56 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKD 114
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 156
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFG K +G ++ G +++A E + YT D W G
Sbjct: 157 -------HVKITDFGRAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR--FLSLEAIAIMRR 245
V ++E++ G P+ G E+ SI+ R P+ +++ IMR+
Sbjct: 209 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQPPICTIDVYMIMRK 256
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSYT-RAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 187 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 244 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSECQHLIR 283
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 172 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 229 GILLYDMVCGDIPFEHDEE------IIGGQVFFRQRVSXECQHLIR 268
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 39/229 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 57 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 115
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 116 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 157
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 158 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR--FLSLEAIAIMRR 245
V ++E++ G P+ G E+ SI+ R P+ +++ IMR+
Sbjct: 210 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQPPICTIDVYMIMRK 257
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 173 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 230 GILLYDMVCGDIPFEHDEE------IIGGQVFFRQRVSXECQHLIR 269
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 187 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 244 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSXECQHLIR 283
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 173 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 230 GILLYDMVCGDIPFEHDEE------IIGGQVFFRQRVSXECQHLIR 269
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 57/239 (23%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESL-LSEKRIFEVANTMRHPFLVNLFACFQT 59
V +++R TG+ A+K ++ +E E ++ R ++ ++H +VNL +T
Sbjct: 33 VFKARHRKTGQKVALKK-----VLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 87
Query: 60 EA----------HVCF-VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRI 108
+A ++ F E+ G L + SE + V ++ GL Y+H ++I
Sbjct: 88 KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM--QMLLNGLYYIHRNKI 145
Query: 109 IYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK-------- 160
++R ++K + +G +K+ADFGL +
Sbjct: 146 LHR--------DMKAANVLITR-----------------DGVLKLADFGLARAFSLAKNS 180
Query: 161 EGMGFGDRTGTFCGTPEFLAPEVLT-ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE 218
+ + +R T P PE+L E Y +D WG G ++ EM G+ E+
Sbjct: 181 QPNRYXNRVVTLWYRP----PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 235
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 151 VKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEML-V 207
VKI DFG+ ++ + G ++APE L + +T + D W GV+++E+ +
Sbjct: 169 VKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 228
Query: 208 GESPFPGDDEEEVFDSIVN 226
E P+ G E+V +++
Sbjct: 229 AEQPYQGLSNEQVLKFVMD 247
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 192 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 248
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 249 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSXECQHLIR 288
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 55/238 (23%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESL-LSEKRIFEVANTMRHPFLVNLFACFQT 59
V +++R TG+ A+K ++ +E E ++ R ++ ++H +VNL +T
Sbjct: 34 VFKARHRKTGQKVALKK-----VLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 60 EAH-----------VCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRI 108
+A V E+ G L + SE + V ++ GL Y+H ++I
Sbjct: 89 KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM--QMLLNGLYYIHRNKI 146
Query: 109 IYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK-------- 160
++R ++K + +G +K+ADFGL +
Sbjct: 147 LHR--------DMKAANVLITR-----------------DGVLKLADFGLARAFSLAKNS 181
Query: 161 EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE 218
+ + +R T P L +L E Y +D WG G ++ EM G+ E+
Sbjct: 182 QPNRYXNRVVTLWYRPPEL---LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 236
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSYT-RAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 140 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 197 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSXECQHLIR 236
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 41/227 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + L E I HP ++ L V V EY G
Sbjct: 65 AIKTLKVG--YTEKQRRDFLGEASIM---GQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 119
Query: 74 DL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L + H F+ + V + G++YL + ++R + N
Sbjct: 120 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA--------------ARN 165
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVLTE 186
+NS+ K++DFGL + + R G + +PE +
Sbjct: 166 ILINSNL-----------VCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAY 212
Query: 187 TSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+T A D W G++++E M GE P+ ++V + V++ R P
Sbjct: 213 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLP 258
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 57/239 (23%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESL-LSEKRIFEVANTMRHPFLVNLFACFQT 59
V +++R TG+ A+K ++ +E E ++ R ++ ++H +VNL +T
Sbjct: 34 VFKARHRKTGQKVALKK-----VLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 60 EA----------HVCF-VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRI 108
+A ++ F E+ G L + SE + V ++ GL Y+H ++I
Sbjct: 89 KASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM--QMLLNGLYYIHRNKI 146
Query: 109 IYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK-------- 160
++R ++K + +G +K+ADFGL +
Sbjct: 147 LHR--------DMKAANVLITR-----------------DGVLKLADFGLARAFSLAKNS 181
Query: 161 EGMGFGDRTGTFCGTPEFLAPEVLT-ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE 218
+ + +R T P PE+L E Y +D WG G ++ EM G+ E+
Sbjct: 182 QPNRYXNRVVTLWYRP----PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 236
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 41/227 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + L E I HP ++ L V V EY G
Sbjct: 77 AIKTLKVG--YTEKQRRDFLGEASIM---GQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 74 DL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L + H F+ + V + G++YL + ++R + N
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLA--------------ARN 177
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVLTE 186
+NS+ K++DFGL + + R G + +PE +
Sbjct: 178 ILINSNL-----------VCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAY 224
Query: 187 TSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+T A D W G++++E M GE P+ ++V + V++ R P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLP 270
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 57/239 (23%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESL-LSEKRIFEVANTMRHPFLVNLFACFQT 59
V +++R TG+ A+K ++ +E E ++ R ++ ++H +VNL +T
Sbjct: 34 VFKARHRKTGQKVALKK-----VLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 60 EAH-----------VCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRI 108
+A V E+ G L + SE + V ++ GL Y+H ++I
Sbjct: 89 KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM--QMLLNGLYYIHRNKI 146
Query: 109 IYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK-------- 160
++R ++K + +G +K+ADFGL +
Sbjct: 147 LHR--------DMKAANVLITR-----------------DGVLKLADFGLARAFSLAKNS 181
Query: 161 EGMGFGDRTGTFCGTPEFLAPEVLT-ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE 218
+ + +R T P PE+L E Y +D WG G ++ EM G+ E+
Sbjct: 182 QPNRYXNRVVTLWYRP----PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 236
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 41/227 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + L E I HP ++ L V V EY G
Sbjct: 48 AIKTLKVG--YTEKQRRDFLGEASIM---GQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 102
Query: 74 DL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L + H F+ + V + G++YL + ++R + N
Sbjct: 103 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA--------------ARN 148
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVLTE 186
+NS+ K++DFGL + + R G + +PE +
Sbjct: 149 ILINSNL-----------VCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAY 195
Query: 187 TSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+T A D W G++++E M GE P+ ++V + V++ R P
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLP 241
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 85/214 (39%), Gaps = 51/214 (23%)
Query: 8 NTGEYFAIKALKK---GDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAH- 62
NTGE A+K+LK G+ IA K+ E+ + H +V C + +
Sbjct: 48 NTGEQVAVKSLKPESGGNHIA--------DLKKEIEILRNLYHENIVKYKGICTEDGGNG 99
Query: 63 VCFVMEYAAGGDLMMHI--HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +ME+ G L ++ + + + + + YA + G+ YL + ++R +
Sbjct: 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLA------ 153
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC------KEGMGFGDRTGTFCG 174
+ + ++E VKI DFGL KE D
Sbjct: 154 -------------------ARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR----D 190
Query: 175 TPEFL-APEVLTETSYTRAVDWWGLGVLIFEMLV 207
+P F APE L ++ + A D W GV + E+L
Sbjct: 191 SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 159 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 215
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 216 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSXECQHLIR 255
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 160 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 217 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSXECQHLIR 256
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 146 DTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETS----YTRAVDWWGLGVL 201
D G +K+ DFG+ + + +T G ++APE + ++ Y D W LG+
Sbjct: 160 DRSGNIKLCDFGISGQLVDSIAKTRD-AGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218
Query: 202 IFEMLVGESPFPGDDEEEVFDSIVN 226
++E+ G P+P VFD +
Sbjct: 219 LYELATGRFPYPK--WNSVFDQLTQ 241
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 160 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 217 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSXECQHLIR 256
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 41/227 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + L E I HP ++ L V V EY G
Sbjct: 77 AIKTLKVG--YTEKQRRDFLGEASIM---GQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 74 DL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L + H F+ + V + G++YL + ++R + N
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA--------------ARN 177
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVLTE 186
+NS+ K++DFGL + + R G + +PE +
Sbjct: 178 ILINSNL-----------VCKVSDFGLARVLEDDPEAAYTTRGGKI--PIRWTSPEAIAY 224
Query: 187 TSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+T A D W G++++E M GE P+ ++V + V++ R P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLP 270
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSYT-RAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 172 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 229 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSECQHLIR 268
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSYT-RAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 143 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 199
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 200 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSECQHLIR 239
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 50 LVNLFACFQTE---AHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHES 106
L+N+F +T V VME +L IH ++ E R + ++ G+++LH +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHE-RMSYLLYQMLCGIKHLHSA 145
Query: 107 RIIYR--PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMG 164
II+R SNI V ++ +KI DFGL +
Sbjct: 146 GIIHRDLKPSNI---------------------------VVKSDCTLKILDFGLARTACT 178
Query: 165 FGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI 224
T + T + APEV+ Y VD W +G ++ E++ G F G D + ++ +
Sbjct: 179 NFMMT-PYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKV 237
Query: 225 V 225
+
Sbjct: 238 I 238
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 85/214 (39%), Gaps = 51/214 (23%)
Query: 8 NTGEYFAIKALKK---GDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFA-CFQTEAH- 62
NTGE A+K+LK G+ IA K+ E+ + H +V C + +
Sbjct: 36 NTGEQVAVKSLKPESGGNHIA--------DLKKEIEILRNLYHENIVKYKGICTEDGGNG 87
Query: 63 VCFVMEYAAGGDLMMHI--HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEE 120
+ +ME+ G L ++ + + + + + YA + G+ YL + ++R +
Sbjct: 88 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLA------ 141
Query: 121 IKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC------KEGMGFGDRTGTFCG 174
+ + ++E VKI DFGL KE D
Sbjct: 142 -------------------ARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR----D 178
Query: 175 TPEFL-APEVLTETSYTRAVDWWGLGVLIFEMLV 207
+P F APE L ++ + A D W GV + E+L
Sbjct: 179 SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 173 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 230 GILLYDMVCGDIPFEHDEE------IIGGQVFFRQRVSSECQHLIR 269
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 187 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 244 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSECQHLIR 283
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 167 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 223
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 224 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSXECQHLIR 263
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 75/209 (35%), Gaps = 53/209 (25%)
Query: 7 RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV 66
+ T E FA+K L+ AR EVE + + + NL+A + + V
Sbjct: 40 KRTQEKFALKMLQDCPK-ARREVELHWRASQCPHIVRIVD--VYENLYAGRKC---LLIV 93
Query: 67 MEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKR 123
ME GG+L I F+E A + +QYLH I +R ++K
Sbjct: 94 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR--------DVK- 144
Query: 124 IEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEV 183
+ + T +K+ DFG KE G
Sbjct: 145 -------------PENLLYTSKRPNAILKLTDFGFAKETTG------------------- 172
Query: 184 LTETSYTRAVDWWGLGVLIFEMLVGESPF 212
Y ++ D W LGV+++ +L G PF
Sbjct: 173 ---EKYDKSCDMWSLGVIMYILLCGYPPF 198
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 173 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 230 GILLYDMVCGDIPFEHDEE------IIGGQVFFRQRVSSECQHLIR 269
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 84/221 (38%), Gaps = 49/221 (22%)
Query: 5 QYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVC 64
++R TG A+K +++ ++E + +L + + V + P++V F F T V
Sbjct: 45 RFRKTGHVIAVKQMRRSG--NKEENKRILMDLDV--VLKSHDCPYIVQCFGTFITNTDVF 100
Query: 65 FVMEY--AAGGDLMMHIHADVFSEPRAVF--YAACVVLGLQYLHESR-IIYR--PQSNIT 117
ME L + + P + +V L YL E +I+R SNI
Sbjct: 101 IAMELMGTCAEKLKKRMQGPI---PERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNI- 156
Query: 118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTP 176
+ D G +K+ DFG+ G D+ G
Sbjct: 157 --------------------------LLDERGQIKLCDFGI--SGRLVDDKAKDRSAGCA 188
Query: 177 EFLAPEVL-----TETSYTRAVDWWGLGVLIFEMLVGESPF 212
++APE + T+ Y D W LG+ + E+ G+ P+
Sbjct: 189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY 229
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 172 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 229 GILLYDMVCGDIPFEHDEE------IIGGQVFFRQRVSSECQHLIR 268
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 172 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 229 GILLYDMVCGDIPFEHDEE------IIGGQVFFRQRVSSECQHLIR 268
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSYT-RAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 140 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 197 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSECQHLIR 236
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 84/221 (38%), Gaps = 44/221 (19%)
Query: 14 AIKALKKG--DIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAA 71
AIK LK G D RD LSE I HP +++L V + EY
Sbjct: 46 AIKTLKAGYTDKQRRD----FLSEASIM---GQFDHPNIIHLEGVVTKCKPVMIITEYME 98
Query: 72 GG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQ 129
G D + + F+ + V + G++YL + ++R +
Sbjct: 99 NGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLA--------------A 144
Query: 130 ENYKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVL 184
N VNS+ K++DFG+ + + R G + APE +
Sbjct: 145 RNILVNSNL-----------VCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAI 191
Query: 185 TETSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSI 224
+T A D W G++++E M GE P+ ++V +I
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 84/221 (38%), Gaps = 44/221 (19%)
Query: 14 AIKALKKG--DIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAA 71
AIK LK G D RD LSE I HP +++L V + EY
Sbjct: 61 AIKTLKAGYTDKQRRD----FLSEASIM---GQFDHPNIIHLEGVVTKCKPVMIITEYME 113
Query: 72 GG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQ 129
G D + + F+ + V + G++YL + ++R +
Sbjct: 114 NGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLA--------------A 159
Query: 130 ENYKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVL 184
N VNS+ K++DFG+ + + R G + APE +
Sbjct: 160 RNILVNSNL-----------VCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAI 206
Query: 185 TETSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSI 224
+T A D W G++++E M GE P+ ++V +I
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSYT-RAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 144 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 200
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 201 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSECQHLIR 240
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSYT-RAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 145 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 201
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 202 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSECQHLIR 241
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 41/227 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + L E I HP ++ L V V EY G
Sbjct: 77 AIKTLKVG--YTEKQRRDFLGEASIM---GQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 74 DL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L + H F+ + V + G++YL + ++R + N
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA--------------ARN 177
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVLTE 186
+NS+ K++DFGL + + R G + +PE +
Sbjct: 178 ILINSNL-----------VCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAY 224
Query: 187 TSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+T A D W G++++E M GE P+ ++V + V++ R P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLP 270
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 140 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 197 GILLYDMVCGDIPFEHDEE------IIGGQVFFRQRVSSECQHLIR 236
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 41/227 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + L E I HP ++ L V V EY G
Sbjct: 75 AIKTLKVG--YTEKQRRDFLGEASIM---GQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 129
Query: 74 DL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L + H F+ + V + G++YL + ++R + N
Sbjct: 130 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA--------------ARN 175
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVLTE 186
+NS+ K++DFGL + + R G + +PE +
Sbjct: 176 ILINSNL-----------VCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAY 222
Query: 187 TSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+T A D W G++++E M GE P+ ++V + V++ R P
Sbjct: 223 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLP 268
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 79/213 (37%), Gaps = 44/213 (20%)
Query: 10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH----VCF 65
GE A+K +RDE +S E ++ +RH ++ A T H +
Sbjct: 60 GENVAVKIFS-----SRDE-KSWFRETELYNTV-MLRHENILGFIASDMTSRHSSTQLWL 112
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
+ Y G L ++ + + GL +LH + + I ++K
Sbjct: 113 ITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN 172
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC------KEGMGFGDRTGTFCGTPEFL 179
V++N G IAD GL + G+ GT ++
Sbjct: 173 ILVKKN-----------------GQCCIADLGLAVMHSQSTNQLDVGNNPRV--GTKRYM 213
Query: 180 APEVLTET-------SYTRAVDWWGLGVLIFEM 205
APEVL ET SY R VD W G++++E+
Sbjct: 214 APEVLDETIQVDCFDSYKR-VDIWAFGLVLWEV 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 41/227 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + L E I HP ++ L V V EY G
Sbjct: 77 AIKTLKVG--YTEKQRRDFLGEASIM---GQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 74 DL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L + H F+ + V + G++YL + ++R + N
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA--------------ARN 177
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVLTE 186
+NS+ K++DFGL + + R G + +PE +
Sbjct: 178 ILINSNL-----------VCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAY 224
Query: 187 TSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+T A D W G++++E M GE P+ ++V + V++ R P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLP 270
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 41/227 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + L E I HP ++ L V V EY G
Sbjct: 77 AIKTLKVG--YTEKQRRDFLGEASIM---GQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 74 DL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L + H F+ + V + G++YL + ++R + N
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA--------------ARN 177
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVLTE 186
+NS+ K++DFGL + + R G + +PE +
Sbjct: 178 ILINSNL-----------VCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAY 224
Query: 187 TSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+T A D W G++++E M GE P+ ++V + V++ R P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLP 270
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 41/227 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + L E I HP ++ L V V EY G
Sbjct: 77 AIKTLKVG--YTEKQRRDFLGEASIM---GQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 74 DL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L + H F+ + V + G++YL + ++R + N
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA--------------ARN 177
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVLTE 186
+NS+ K++DFGL + + R G + +PE +
Sbjct: 178 ILINSNL-----------VCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAY 224
Query: 187 TSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+T A D W G++++E M GE P+ ++V + V++ R P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLP 270
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSYT-RAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 144 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 200
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 201 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSECQHLIR 240
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 79/213 (37%), Gaps = 44/213 (20%)
Query: 10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH----VCF 65
GE A+K +RDE +S E ++ +RH ++ A T H +
Sbjct: 31 GENVAVKIFS-----SRDE-KSWFRETELYNTV-MLRHENILGFIASDMTSRHSSTQLWL 83
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
+ Y G L ++ + + GL +LH + + I ++K
Sbjct: 84 ITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN 143
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC------KEGMGFGDRTGTFCGTPEFL 179
V++N G IAD GL + G+ GT ++
Sbjct: 144 ILVKKN-----------------GQCCIADLGLAVMHSQSTNQLDVGNNPRV--GTKRYM 184
Query: 180 APEVLTET-------SYTRAVDWWGLGVLIFEM 205
APEVL ET SY R VD W G++++E+
Sbjct: 185 APEVLDETIQVDCFDSYKR-VDIWAFGLVLWEV 216
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSYT-RAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 145 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 201
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 202 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSECQHLIR 241
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 159 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 215
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 216 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSECQHLIR 255
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 79/213 (37%), Gaps = 44/213 (20%)
Query: 10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH----VCF 65
GE A+K +RDE +S E ++ +RH ++ A T H +
Sbjct: 31 GENVAVKIFS-----SRDE-KSWFRETELYNTV-MLRHENILGFIASDMTSRHSSTQLWL 83
Query: 66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE 125
+ Y G L ++ + + GL +LH + + I ++K
Sbjct: 84 ITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN 143
Query: 126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC------KEGMGFGDRTGTFCGTPEFL 179
V++N G IAD GL + G+ GT ++
Sbjct: 144 ILVKKN-----------------GQCCIADLGLAVMHSQSTNQLDVGNNPRV--GTKRYM 184
Query: 180 APEVLTET-------SYTRAVDWWGLGVLIFEM 205
APEVL ET SY R VD W G++++E+
Sbjct: 185 APEVLDETIQVDCFDSYKR-VDIWAFGLVLWEV 216
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 84/221 (38%), Gaps = 44/221 (19%)
Query: 14 AIKALKKG--DIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAA 71
AIK LK G D RD LSE I HP +++L V + EY
Sbjct: 40 AIKTLKAGYTDKQRRD----FLSEASIM---GQFDHPNIIHLEGVVTKCKPVMIITEYME 92
Query: 72 GG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQ 129
G D + + F+ + V + G++YL + ++R +
Sbjct: 93 NGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLA--------------A 138
Query: 130 ENYKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVL 184
N VNS+ K++DFG+ + + R G + APE +
Sbjct: 139 RNILVNSNL-----------VCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAI 185
Query: 185 TETSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSI 224
+T A D W G++++E M GE P+ ++V +I
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 145 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 201
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 202 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSECQHLIR 241
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 160 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 217 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSECQHLIR 256
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 37/205 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFAC-FQTEAHVCFVMEYAAG 72
AIK+L + I +VE+ L E + N HP ++ L E ++ Y
Sbjct: 53 AIKSLSR--ITEMQQVEAFLREGLLMRGLN---HPNVLALIGIMLPPEGLPHVLLPYMCH 107
Query: 73 GDLMMHIHADVFSE--PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE 130
GDL+ I + + + + V G++YL E + ++R ++ + E
Sbjct: 108 GDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR--------DLAARNCMLDE 159
Query: 131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMG---FGDRTGTFCGTP-EFLAPEVLTE 186
++ V K+ADFGL ++ + + + P ++ A E L
Sbjct: 160 SFTV-----------------KVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 187 TSYTRAVDWWGLGVLIFEMLVGESP 211
+T D W GVL++E+L +P
Sbjct: 203 YRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGT-FCGTPEFLAPEVLTETSY-TRAVDWWGL 198
+ ++ G +K+ DFG G D T F GT + PE + Y R+ W L
Sbjct: 179 NILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 235
Query: 199 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR 244
G+L+++M+ G+ PF D+E I+ +V + + +S E ++R
Sbjct: 236 GILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSECQHLIR 275
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 54 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGXLLDYVREHKD 112
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 113 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 154
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 155 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 207 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 240
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 41/227 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + L E I HP ++ L V V EY G
Sbjct: 77 AIKTLKVG--YTEKQRRDFLGEASIM---GQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 74 DL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L + H F+ + V + G++YL + ++R + N
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA--------------ARN 177
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVLTE 186
+NS+ K++DFGL + + R G + +PE +
Sbjct: 178 ILINSNL-----------VCKVSDFGLGRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAY 224
Query: 187 TSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+T A D W G++++E M GE P+ ++V + V++ R P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLP 270
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACF 57
V L+ +N + AIK + + E L+ KRI + N ++ +++ L
Sbjct: 44 VYLAYDKNANKNVAIKKVNRM-------FEDLIDCKRILREITILNRLKSDYIIRLHDLI 96
Query: 58 QTEAHVCF-----VMEYAAGGDLMMHIHADVF---SEPRAVFYAACVVLGLQYLHESRII 109
E + F V+E A DL +F + + Y ++LG +++HES II
Sbjct: 97 IPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYN--LLLGEKFIHESGII 153
Query: 110 YR---PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFG 166
+R P + + ++ +NS ++I + VND E + + G
Sbjct: 154 HRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHI-VNDLEEKEENEEPG--PHNKNLK 210
Query: 167 DRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGVLIFEML 206
+ + T + APE +L + +YT ++D W G + E+L
Sbjct: 211 KQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 39/186 (20%)
Query: 50 LVNLFACFQTEAHVCFVMEYAAGGDLMMHIHA--------DVFSEP---RAVFYAACVVL 98
+V L +ME GDL ++ + V + P + + A +
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YL+ ++ ++R ++ V E++ V KI DFG+
Sbjct: 137 GMAYLNANKFVHR--------DLAARNCXVAEDFTV-----------------KIGDFGM 171
Query: 159 CKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM-LVGESPFPGD 215
++ + + G +++PE L + +T D W GV+++E+ + E P+ G
Sbjct: 172 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 231
Query: 216 DEEEVF 221
E+V
Sbjct: 232 SNEQVL 237
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 151 VKIADFGLCKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM-LV 207
VKI DFG+ ++ + + G +++PE L + +T D W GV+++E+ +
Sbjct: 199 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 258
Query: 208 GESPFPGDDEEEVF 221
E P+ G E+V
Sbjct: 259 AEQPYQGLSNEQVL 272
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 39/186 (20%)
Query: 50 LVNLFACFQTEAHVCFVMEYAAGGDLMMHIHA--------DVFSEP---RAVFYAACVVL 98
+V L +ME GDL ++ + V + P + + A +
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YL+ ++ ++R ++ V E++ V KI DFG+
Sbjct: 143 GMAYLNANKFVHR--------DLAARNCMVAEDFTV-----------------KIGDFGM 177
Query: 159 CKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM-LVGESPFPGD 215
++ + + G +++PE L + +T D W GV+++E+ + E P+ G
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 237
Query: 216 DEEEVF 221
E+V
Sbjct: 238 SNEQVL 243
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 39/186 (20%)
Query: 50 LVNLFACFQTEAHVCFVMEYAAGGDLMMHIHA--------DVFSEP---RAVFYAACVVL 98
+V L +ME GDL ++ + V + P + + A +
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YL+ ++ ++R ++ V E++ V KI DFG+
Sbjct: 137 GMAYLNANKFVHR--------DLAARNCMVAEDFTV-----------------KIGDFGM 171
Query: 159 CKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM-LVGESPFPGD 215
++ + + G +++PE L + +T D W GV+++E+ + E P+ G
Sbjct: 172 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 231
Query: 216 DEEEVF 221
E+V
Sbjct: 232 SNEQVL 237
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 93/227 (40%), Gaps = 19/227 (8%)
Query: 1 VILSQYRNTGEYFAIKA---LKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF 57
V+L Q+ + +Y+A+K +KK A+ E + L K+I +V F
Sbjct: 51 VLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADIL---KKIQNDDINNN--NIVKYHGKF 105
Query: 58 QTEAHVCFVMEYAAGG--DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIY---RP 112
H+C + E +++ + + F Y ++ L YL + + + +P
Sbjct: 106 MYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKP 165
Query: 113 QSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTF 172
++ + + E + +V ++I++ + G +K+ DFG D G+
Sbjct: 166 ENILLDDPY--FEKSLITVRRVTDGKKIQIYRTKSTG-IKLIDFGCATFK---SDYHGSI 219
Query: 173 CGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 219
T ++ APEV+ + + D W G ++ E+ G F + E
Sbjct: 220 INTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHME 266
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 39/186 (20%)
Query: 50 LVNLFACFQTEAHVCFVMEYAAGGDLMMHIHA--------DVFSEP---RAVFYAACVVL 98
+V L +ME GDL ++ + V + P + + A +
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YL+ ++ ++R ++ V E++ V KI DFG+
Sbjct: 150 GMAYLNANKFVHR--------DLAARNCMVAEDFTV-----------------KIGDFGM 184
Query: 159 CKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM-LVGESPFPGD 215
++ + + G +++PE L + +T D W GV+++E+ + E P+ G
Sbjct: 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244
Query: 216 DEEEVF 221
E+V
Sbjct: 245 SNEQVL 250
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 39/186 (20%)
Query: 50 LVNLFACFQTEAHVCFVMEYAAGGDLMMHIHA--------DVFSEP---RAVFYAACVVL 98
+V L +ME GDL ++ + V + P + + A +
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YL+ ++ ++R ++ V E++ V KI DFG+
Sbjct: 143 GMAYLNANKFVHR--------DLAARNCMVAEDFTV-----------------KIGDFGM 177
Query: 159 CKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM-LVGESPFPGD 215
++ + + G +++PE L + +T D W GV+++E+ + E P+ G
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 237
Query: 216 DEEEVF 221
E+V
Sbjct: 238 SNEQVL 243
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 39/186 (20%)
Query: 50 LVNLFACFQTEAHVCFVMEYAAGGDLMMHIHA--------DVFSEP---RAVFYAACVVL 98
+V L +ME GDL ++ + V + P + + A +
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YL+ ++ ++R ++ V E++ V KI DFG+
Sbjct: 150 GMAYLNANKFVHR--------DLAARNCMVAEDFTV-----------------KIGDFGM 184
Query: 159 CKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM-LVGESPFPGD 215
++ + + G +++PE L + +T D W GV+++E+ + E P+ G
Sbjct: 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244
Query: 216 DEEEVF 221
E+V
Sbjct: 245 SNEQVL 250
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 56 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 114
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 156
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 157 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 209 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 242
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 61 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 119
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 120 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 161
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 162 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 214 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 247
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 148 EGYVKIADFGLCKEGMGFGDRTGTF----CGTPEFLAPEVLTETSYTR-----------A 192
+G +K+ DFG+ + D T GT ++ PE + + S +R
Sbjct: 162 DGMLKLIDFGIANQMQP--DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 219
Query: 193 VDWWGLGVLIFEMLVGESPF 212
D W LG +++ M G++PF
Sbjct: 220 SDVWSLGCILYYMTYGKTPF 239
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 39/186 (20%)
Query: 50 LVNLFACFQTEAHVCFVMEYAAGGDLMMHIHA--------DVFSEP---RAVFYAACVVL 98
+V L +ME GDL ++ + V + P + + A +
Sbjct: 81 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 140
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YL+ ++ ++R ++ V E++ V KI DFG+
Sbjct: 141 GMAYLNANKFVHR--------DLAARNCMVAEDFTV-----------------KIGDFGM 175
Query: 159 CKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM-LVGESPFPGD 215
++ + + G +++PE L + +T D W GV+++E+ + E P+ G
Sbjct: 176 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 235
Query: 216 DEEEVF 221
E+V
Sbjct: 236 SNEQVL 241
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 79 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 137
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 138 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 179
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 180 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 231
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 232 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 265
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 57 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 115
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 116 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 157
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 158 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 210 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 243
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 39/186 (20%)
Query: 50 LVNLFACFQTEAHVCFVMEYAAGGDLMMHIHA--------DVFSEP---RAVFYAACVVL 98
+V L +ME GDL ++ + V + P + + A +
Sbjct: 80 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 139
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YL+ ++ ++R ++ V E++ V KI DFG+
Sbjct: 140 GMAYLNANKFVHR--------DLAARNCMVAEDFTV-----------------KIGDFGM 174
Query: 159 CKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM-LVGESPFPGD 215
++ + + G +++PE L + +T D W GV+++E+ + E P+ G
Sbjct: 175 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 234
Query: 216 DEEEVF 221
E+V
Sbjct: 235 SNEQVL 240
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 57 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 115
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 116 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 157
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 158 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 210 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 243
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 48 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 106
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 107 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 148
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 149 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 201 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 234
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V +M+ G L+ ++ H D
Sbjct: 56 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKD 114
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 156
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFG K +G ++ G +++A E + YT D W G
Sbjct: 157 -------HVKITDFGRAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 209 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 242
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 61 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 119
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 120 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 161
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 162 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 214 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 247
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 148 EGYVKIADFGLCKEGMGFGDRTGTF----CGTPEFLAPEVLTETSYTR-----------A 192
+G +K+ DFG+ + D T GT ++ PE + + S +R
Sbjct: 146 DGMLKLIDFGIANQMQP--DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 203
Query: 193 VDWWGLGVLIFEMLVGESPF 212
D W LG +++ M G++PF
Sbjct: 204 SDVWSLGCILYYMTYGKTPF 223
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 148 EGYVKIADFGLCKEGMGFGDRTGTF----CGTPEFLAPEVLTETSYTR-----------A 192
+G +K+ DFG+ + D T GT ++ PE + + S +R
Sbjct: 143 DGMLKLIDFGIANQMQP--DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 200
Query: 193 VDWWGLGVLIFEMLVGESPF 212
D W LG +++ M G++PF
Sbjct: 201 SDVWSLGCILYYMTYGKTPF 220
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 37/220 (16%)
Query: 23 IIARDEVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI 79
I+ E S + K I + A M +P + L T V + + G L+ ++
Sbjct: 83 IMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV 141
Query: 80 --HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSS 137
H D + + + G+ YL + R+++R + N V +
Sbjct: 142 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTP 187
Query: 138 QEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVD 194
Q +VKI DFGL K +G ++ G +++A E + YT D
Sbjct: 188 Q-----------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 235
Query: 195 WWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
W GV ++E++ G P+ G E+ SI+ R P+
Sbjct: 236 VWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 274
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 54 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 112
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 113 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 154
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 155 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 207 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 240
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 148 EGYVKIADFGLCKEGMGFGDRTGTF----CGTPEFLAPEVLTETSYTR-----------A 192
+G +K+ DFG+ + D T GT ++ PE + + S +R
Sbjct: 190 DGMLKLIDFGIANQMQP--DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 247
Query: 193 VDWWGLGVLIFEMLVGESPF 212
D W LG +++ M G++PF
Sbjct: 248 SDVWSLGCILYYMTYGKTPF 267
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V +M+ G L+ ++ H D
Sbjct: 58 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKD 116
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 117 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 158
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFG K +G ++ G +++A E + YT D W G
Sbjct: 159 -------HVKITDFGRAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 210
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 211 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 244
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 60 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 118
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 119 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 160
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 161 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 212
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 213 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 246
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 39/186 (20%)
Query: 50 LVNLFACFQTEAHVCFVMEYAAGGDLMMHIHA--------DVFSEP---RAVFYAACVVL 98
+V L +ME GDL ++ + V + P + + A +
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YL+ ++ ++R ++ V E++ V KI DFG+
Sbjct: 144 GMAYLNANKFVHR--------DLAARNCMVAEDFTV-----------------KIGDFGM 178
Query: 159 CKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM-LVGESPFPGD 215
++ + + G +++PE L + +T D W GV+++E+ + E P+ G
Sbjct: 179 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 238
Query: 216 DEEEVF 221
E+V
Sbjct: 239 SNEQVL 244
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 39/229 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 56 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 114
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 156
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFG K +G ++ G +++A E + YT D W G
Sbjct: 157 -------HVKITDFGRAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR--FLSLEAIAIMRR 245
V ++E++ G P+ G E+ SI+ R P+ +++ IMR+
Sbjct: 209 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQPPICTIDVYMIMRK 256
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 148 EGYVKIADFGLCKEGMGFGDRTGTF----CGTPEFLAPEVLTETSYTR-----------A 192
+G +K+ DFG+ + D T GT ++ PE + + S +R
Sbjct: 142 DGMLKLIDFGIANQMQP--DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 199
Query: 193 VDWWGLGVLIFEMLVGESPF 212
D W LG +++ M G++PF
Sbjct: 200 SDVWSLGCILYYMTYGKTPF 219
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 54 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 112
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 113 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 154
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 155 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 207 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 240
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 148 EGYVKIADFGLCKEGMGFGDRTG----TFCGTPEFLAPEVLTETSYTR-----------A 192
+G +K+ DFG+ + D T + GT ++ PE + + S +R
Sbjct: 190 DGMLKLIDFGIANQMQP--DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 247
Query: 193 VDWWGLGVLIFEMLVGESPF 212
D W LG +++ M G++PF
Sbjct: 248 SDVWSLGCILYYMTYGKTPF 267
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 44/250 (17%)
Query: 1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFE---VANTMRHPFLVNLFACF 57
V L+ +NT + AIK + + E L+ KRI + N ++ +++ L+
Sbjct: 42 VYLAYDKNTEKNVAIKKVNRM-------FEDLIDCKRILREITILNRLKSDYIIRLYDLI 94
Query: 58 QTEAHVCF-----VMEYAAGGDLMMHIHADVF---SEPRAVFYAACVVLGLQYLHESRII 109
+ + F V+E A DL +F + + Y ++LG ++HES II
Sbjct: 95 IPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYN--LLLGENFIHESGII 151
Query: 110 YR---PQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFG 166
+R P + + ++ +NS ++ + VND E +
Sbjct: 152 HRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNI-VNDLEENEEPG-----PHNKNLK 205
Query: 167 DRTGTFCGTPEFLAPE-VLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV 225
+ + T + APE +L + +YT+++D W G + E+L + S +
Sbjct: 206 KQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL------------NMLQSHI 253
Query: 226 NDEV-RYPRF 234
ND R+P F
Sbjct: 254 NDPTNRFPLF 263
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 28 EVESLLSEKRIFEVANTMR---HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI--HAD 82
E S + K I + A M +P + L T V + + G L+ ++ H D
Sbjct: 51 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD 109
Query: 83 VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKL 142
+ + + G+ YL + R+++R + N V + Q
Sbjct: 110 NIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLA--------------ARNVLVKTPQ---- 151
Query: 143 TVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTP---EFLAPEVLTETSYTRAVDWWGLG 199
+VKI DFGL K +G ++ G +++A E + YT D W G
Sbjct: 152 -------HVKITDFGLAKL-LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 203
Query: 200 VLIFEMLV-GESPFPGDDEEEVFDSIVNDEVRYPR 233
V ++E++ G P+ G E+ SI+ R P+
Sbjct: 204 VTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 237
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 72/186 (38%), Gaps = 39/186 (20%)
Query: 50 LVNLFACFQTEAHVCFVMEYAAGGDLMMHIHA--------DVFSEP---RAVFYAACVVL 98
+V L +ME GDL ++ + V + P + + A +
Sbjct: 75 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 134
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YL+ ++ ++R ++ V E++ V KI DFG+
Sbjct: 135 GMAYLNANKFVHR--------DLAARNCMVAEDFTV-----------------KIGDFGM 169
Query: 159 CKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM-LVGESPFPGD 215
++ + G +++PE L + +T D W GV+++E+ + E P+ G
Sbjct: 170 TRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 229
Query: 216 DEEEVF 221
E+V
Sbjct: 230 SNEQVL 235
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 138 QEIKLTVNDTEGYVK--IADFGLCKE----GMGFGDRTGTFCGTPEFLAPEVLTET---S 188
I +++ + G +K I+DFGLCK+ F R+G GT ++APE+L+E +
Sbjct: 147 HNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV-PGTEGWIAPEMLSEDCKEN 205
Query: 189 YTRAVDWWGLGVLIFEMLV-GESPF 212
T VD + G + + ++ G PF
Sbjct: 206 PTYTVDIFSAGCVFYYVISEGSHPF 230
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 72/186 (38%), Gaps = 39/186 (20%)
Query: 50 LVNLFACFQTEAHVCFVMEYAAGGDLMMHIHA--------DVFSEP---RAVFYAACVVL 98
+V L +ME GDL ++ + V + P + + A +
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 99 GLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL 158
G+ YL+ ++ ++R ++ V E++ V KI DFG+
Sbjct: 144 GMAYLNANKFVHR--------DLAARNCMVAEDFTV-----------------KIGDFGM 178
Query: 159 CKE--GMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEM-LVGESPFPGD 215
++ + G +++PE L + +T D W GV+++E+ + E P+ G
Sbjct: 179 TRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 238
Query: 216 DEEEVF 221
E+V
Sbjct: 239 SNEQVL 244
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 170 GTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEV 229
G GT + APE +E+ T D + L +++E L G P+ G D+ V + +N +
Sbjct: 193 GNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQG-DQLSVXGAHINQAI 251
Query: 230 RYP 232
P
Sbjct: 252 PRP 254
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 77/207 (37%), Gaps = 40/207 (19%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + L E I HP +++L V V EY G
Sbjct: 54 AIKTLKVG--YTEKQRRDFLGEASIM---GQFDHPNIIHLEGVVTKSKPVMIVTEYMENG 108
Query: 74 --DLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
D + + F+ + V + G++YL + ++R + N
Sbjct: 109 SLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLA--------------ARN 154
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVLTE 186
+NS+ K++DFGL + + R G + APE +
Sbjct: 155 ILINSNL-----------VCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAF 201
Query: 187 TSYTRAVDWWGLGVLIFEMLV-GESPF 212
+T A D W G++++E++ GE P+
Sbjct: 202 RKFTSASDVWSYGIVMWEVVSYGERPY 228
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 13/78 (16%)
Query: 148 EGYVKIADFGLCKEGMGFGDRT--GTFCGTPEFLAPEVLTETSYTR-----------AVD 194
+G +K+ DFG+ + + GT ++ PE + + S +R D
Sbjct: 162 DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 221
Query: 195 WWGLGVLIFEMLVGESPF 212
W LG +++ M G++PF
Sbjct: 222 VWSLGCILYYMTYGKTPF 239
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 83/227 (36%), Gaps = 41/227 (18%)
Query: 14 AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG 73
AIK LK G + L E I HP ++ L V V E G
Sbjct: 48 AIKTLKVG--YTEKQRRDFLGEASIM---GQFDHPNIIRLEGVVTKSKPVMIVTEXMENG 102
Query: 74 DL--MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQEN 131
L + H F+ + V + G++YL + ++R + N
Sbjct: 103 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA--------------ARN 148
Query: 132 YKVNSSQEIKLTVNDTEGYVKIADFGLCK-----EGMGFGDRTGTFCGTPEFLAPEVLTE 186
+NS+ K++DFGL + + R G + +PE +
Sbjct: 149 ILINSNL-----------VCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAY 195
Query: 187 TSYTRAVDWWGLGVLIFE-MLVGESPFPGDDEEEVFDSIVNDEVRYP 232
+T A D W G++++E M GE P+ ++V + V++ R P
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLP 241
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,225,337
Number of Sequences: 62578
Number of extensions: 302596
Number of successful extensions: 2981
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 348
Number of HSP's that attempted gapping in prelim test: 1029
Number of HSP's gapped (non-prelim): 1169
length of query: 245
length of database: 14,973,337
effective HSP length: 96
effective length of query: 149
effective length of database: 8,965,849
effective search space: 1335911501
effective search space used: 1335911501
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)