Query         psy3347
Match_columns 245
No_of_seqs    114 out of 1050
Neff          9.8 
Searched_HMMs 29240
Date          Fri Aug 16 22:41:23 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy3347.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3347hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.5E-54 8.6E-59  357.1  18.5  217    1-245    48-267 (311)
  2 4fih_A Serine/threonine-protei 100.0 9.6E-53 3.3E-57  352.4  20.0  214    1-245    90-306 (346)
  3 3hyh_A Carbon catabolite-derep 100.0 3.2E-52 1.1E-56  339.8  19.4  215    1-245    29-245 (275)
  4 4b9d_A Serine/threonine-protei 100.0 1.7E-52 5.9E-57  351.4  17.5  216    1-245    40-259 (350)
  5 3ubd_A Ribosomal protein S6 ki 100.0   1E-52 3.5E-57  347.1  15.6  216    1-245    40-259 (304)
  6 4fie_A Serine/threonine-protei 100.0 9.8E-52 3.4E-56  354.3  19.9  214    1-245   167-383 (423)
  7 4g3f_A NF-kappa-beta-inducing  100.0 6.3E-51 2.2E-55  340.4  16.5  209    1-245    74-292 (336)
  8 3fpq_A Serine/threonine-protei 100.0   4E-49 1.4E-53  324.0  21.5  213    1-245    42-265 (290)
  9 4asz_A BDNF/NT-3 growth factor 100.0 7.8E-50 2.7E-54  330.1  16.6  214    1-245    29-265 (299)
 10 4aoj_A High affinity nerve gro 100.0 6.6E-49 2.2E-53  328.7  19.4  214    1-245    57-295 (329)
 11 4gt4_A Tyrosine-protein kinase 100.0   7E-49 2.4E-53  325.7  17.7  215    1-245    42-282 (308)
 12 3v5w_A G-protein coupled recep 100.0 5.1E-48 1.8E-52  345.7  20.4  218    1-245   205-427 (689)
 13 3omv_A RAF proto-oncogene seri 100.0 2.7E-47 9.4E-52  315.3  16.7  212    1-245    52-276 (307)
 14 4b99_A Mitogen-activated prote 100.0 3.9E-46 1.3E-50  319.2  19.2  196    1-226    70-277 (398)
 15 4ase_A Vascular endothelial gr 100.0 6.7E-46 2.3E-50  312.9  15.4  214    1-244    80-322 (353)
 16 3uto_A Twitchin; kinase, muscl 100.0 3.4E-45 1.2E-49  327.0  20.2  213    1-245   173-393 (573)
 17 4g31_A Eukaryotic translation  100.0 2.2E-45 7.5E-50  303.7  16.6  211    1-244    21-261 (299)
 18 1o6l_A RAC-beta serine/threoni 100.0 1.4E-43 4.7E-48  298.1  21.6  217    1-245    21-238 (337)
 19 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.3E-44 2.8E-48  301.3  18.7  217    1-245    39-257 (353)
 20 4f9c_A Cell division cycle 7-r 100.0 1.6E-43 5.4E-48  299.8  18.6  189    1-224    37-260 (361)
 21 1xjd_A Protein kinase C, theta 100.0 5.4E-43 1.8E-47  295.4  20.3  217    1-245    33-251 (345)
 22 2i0e_A Protein kinase C-beta I 100.0 7.8E-43 2.7E-47  295.3  20.0  217    1-245    36-254 (353)
 23 3fe3_A MAP/microtubule affinit 100.0 1.2E-42 4.2E-47  291.4  21.0  215    1-245    31-247 (328)
 24 3hmm_A TGF-beta receptor type- 100.0   2E-43 6.9E-48  292.9  15.8  178    1-212    19-218 (303)
 25 1fot_A TPK1 delta, CAMP-depend 100.0 1.1E-42 3.6E-47  290.6  20.1  214    1-245    22-236 (318)
 26 3a8x_A Protein kinase C IOTA t 100.0 3.1E-42 1.1E-46  290.8  21.7  217    1-245    25-252 (345)
 27 4dc2_A Protein kinase C IOTA t 100.0 2.6E-42 8.8E-47  295.9  21.0  217    1-245    68-295 (396)
 28 2r5t_A Serine/threonine-protei 100.0 1.3E-42 4.4E-47  295.9  18.9  218    1-245    54-272 (373)
 29 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.2E-42 7.6E-47  292.2  19.7  214    1-245    57-271 (350)
 30 3zgw_A Maternal embryonic leuc 100.0 5.4E-42 1.8E-46  289.4  19.9  215    1-245    26-243 (347)
 31 3fxz_A Serine/threonine-protei 100.0 1.3E-41 4.6E-46  281.2  19.8  214    1-245    36-252 (297)
 32 4ejn_A RAC-alpha serine/threon 100.0 4.7E-42 1.6E-46  299.0  17.6  217    1-245   164-382 (446)
 33 3v8s_A RHO-associated protein  100.0 3.1E-42 1.1E-46  296.7  15.8  217    1-245    85-310 (410)
 34 2yab_A Death-associated protei 100.0 3.3E-41 1.1E-45  286.1  20.6  216    1-245    28-255 (361)
 35 4aw2_A Serine/threonine-protei 100.0 1.2E-41   4E-46  295.3  17.5  217    1-245    90-319 (437)
 36 3a62_A Ribosomal protein S6 ki 100.0 3.7E-41 1.3E-45  282.2  19.4  217    1-245    33-254 (327)
 37 4fr4_A YANK1, serine/threonine 100.0 5.9E-41   2E-45  286.5  20.5  216    1-245    31-253 (384)
 38 3pfq_A PKC-B, PKC-beta, protei 100.0 2.1E-41 7.3E-46  308.0  18.7  217    1-245   357-575 (674)
 39 2vd5_A DMPK protein; serine/th 100.0 2.6E-41   9E-46  291.1  18.2  217    1-245    77-308 (412)
 40 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.4E-41 1.8E-45  297.5  20.5  217    1-245   201-426 (543)
 41 3soa_A Calcium/calmodulin-depe 100.0 1.2E-40   4E-45  289.7  21.2  216    1-245    27-250 (444)
 42 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.4E-41 4.7E-46  285.8  14.9  215    1-245    25-241 (336)
 43 4eqm_A Protein kinase; transfe 100.0 2.3E-40 7.9E-45  273.4  21.9  217    1-245    27-250 (294)
 44 2bdw_A Hypothetical protein K1 100.0 2.8E-40 9.6E-45  280.6  22.5  215    1-245    45-267 (362)
 45 2y94_A 5'-AMP-activated protei 100.0 7.7E-41 2.6E-45  292.9  19.5  216    1-245    32-249 (476)
 46 2y0a_A Death-associated protei 100.0 3.6E-40 1.2E-44  276.1  20.7  216    1-245    27-254 (326)
 47 2zv2_A Calcium/calmodulin-depe 100.0 3.1E-40 1.1E-44  272.8  19.5  217    1-245    29-275 (298)
 48 2c30_A Serine/threonine-protei 100.0 4.7E-40 1.6E-44  274.9  20.3  213    1-244    61-276 (321)
 49 2eue_A Carbon catabolite derep 100.0 3.9E-40 1.3E-44  269.1  18.4  215    1-245    29-245 (275)
 50 3c0i_A Peripheral plasma membr 100.0 4.3E-40 1.5E-44  278.3  19.2  216    1-245    40-269 (351)
 51 1tki_A Titin; serine kinase, m 100.0 4.2E-40 1.4E-44  275.2  18.8  212    1-245    21-240 (321)
 52 2acx_A G protein-coupled recep 100.0 3.2E-40 1.1E-44  293.6  18.8  216    1-245   200-422 (576)
 53 2x4f_A Myosin light chain kina 100.0 1.6E-39 5.4E-44  277.0  22.1  213    1-245   105-325 (373)
 54 2rku_A Serine/threonine-protei 100.0 2.8E-39 9.5E-44  266.5  22.8  216    1-244    31-247 (294)
 55 3p86_A Serine/threonine-protei 100.0 1.2E-39 3.9E-44  271.1  20.2  214    1-245    53-274 (309)
 56 2owb_A Serine/threonine-protei 100.0 2.3E-39 7.7E-44  272.1  22.0  217    1-245    57-274 (335)
 57 3cok_A Serine/threonine-protei 100.0   4E-40 1.4E-44  269.3  16.6  217    1-245    27-245 (278)
 58 3fdn_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44  266.3  19.0  215    1-245    25-240 (279)
 59 3kn6_A Ribosomal protein S6 ki 100.0 1.5E-39 5.2E-44  272.2  18.4  210    1-244    27-252 (325)
 60 3ork_A Serine/threonine protei 100.0 4.7E-40 1.6E-44  273.4  14.9  217    1-245    28-256 (311)
 61 2vgo_A Serine/threonine-protei 100.0 3.7E-39 1.3E-43  264.5  19.6  214    1-244    30-244 (284)
 62 1kob_A Twitchin; kinase, intra 100.0   5E-39 1.7E-43  275.0  21.0  213    1-245    67-287 (387)
 63 2a2a_A Death-associated protei 100.0   5E-39 1.7E-43  268.4  20.2  216    1-245    28-255 (321)
 64 3oz6_A Mitogen-activated prote 100.0 2.3E-39   8E-44  277.2  18.3  195    1-225    25-244 (388)
 65 2pmi_A Negative RE, cyclin-dep 100.0   4E-39 1.4E-43  268.6  18.9  194    1-225    21-222 (317)
 66 3gni_B Strad alpha; kinase fol 100.0 3.4E-39 1.1E-43  276.2  18.8  195    1-224    43-249 (389)
 67 2qr7_A Ribosomal protein S6 ki 100.0 1.9E-39 6.4E-44  273.5  16.4  210    1-245    38-260 (342)
 68 3nyv_A Calmodulin-domain prote 100.0 1.8E-39 6.1E-44  285.4  17.0  215    1-245    42-264 (484)
 69 3o0g_A Cell division protein k 100.0 9.4E-39 3.2E-43  263.2  20.2  196    1-225    18-216 (292)
 70 3f3z_A Calcium/calmodulin-depe 100.0 1.7E-38 5.9E-43  259.5  21.0  211    1-244    25-243 (277)
 71 3uc3_A Serine/threonine-protei 100.0 1.2E-38   4E-43  270.5  20.6  212    1-245    36-257 (361)
 72 3kk8_A Calcium/calmodulin depe 100.0 2.2E-38 7.4E-43  259.7  21.6  214    1-244    22-243 (284)
 73 2h6d_A 5'-AMP-activated protei 100.0 9.3E-39 3.2E-43  260.8  19.3  215    1-244    27-243 (276)
 74 2psq_A Fibroblast growth facto 100.0 7.6E-39 2.6E-43  272.5  19.4  214    1-244    97-339 (370)
 75 3a7i_A MST3 kinase, serine/thr 100.0 2.3E-38 7.8E-43  262.1  21.0  214    1-244    38-252 (303)
 76 1u5q_A Serine/threonine protei 100.0 2.1E-38 7.1E-43  267.7  21.0  211    1-244    70-287 (348)
 77 3g33_A Cell division protein k 100.0 1.2E-38   4E-43  264.5  18.8  199    1-226    25-233 (308)
 78 3q5i_A Protein kinase; CDPK, m 100.0   2E-38   7E-43  280.0  21.6  215    1-245    52-284 (504)
 79 1nxk_A MAP kinase-activated pr 100.0 1.5E-38   5E-43  273.4  19.7  208    1-245    78-304 (400)
 80 3mwu_A Calmodulin-domain prote 100.0 1.3E-38 4.6E-43  280.0  19.8  214    1-245    38-259 (486)
 81 3bhy_A Death-associated protei 100.0 3.2E-38 1.1E-42  258.6  20.6  216    1-245    21-248 (283)
 82 1cm8_A Phosphorylated MAP kina 100.0   1E-38 3.5E-43  271.5  18.0  192    1-225    41-239 (367)
 83 3kul_A Ephrin type-A receptor  100.0   1E-38 3.4E-43  267.2  17.6  214    1-244    65-288 (325)
 84 2w4o_A Calcium/calmodulin-depe 100.0 1.5E-38 5.1E-43  268.7  18.8  211    1-245    69-288 (349)
 85 3lij_A Calcium/calmodulin depe 100.0 2.9E-38 9.9E-43  278.4  21.1  214    1-245    53-274 (494)
 86 3cbl_A C-FES, proto-oncogene t 100.0 4.1E-39 1.4E-43  274.8  14.8  215    1-245   130-350 (377)
 87 1luf_A Muscle-specific tyrosin 100.0 9.2E-39 3.1E-43  268.6  16.5  215    1-245    63-311 (343)
 88 2jam_A Calcium/calmodulin-depe 100.0 5.4E-38 1.9E-42  260.0  20.8  211    1-244    25-243 (304)
 89 3s95_A LIMK-1, LIM domain kina 100.0 7.9E-39 2.7E-43  265.7  14.9  213    1-244    26-257 (310)
 90 2h34_A Serine/threonine-protei 100.0 5.5E-38 1.9E-42  260.8  19.9  217    1-245    50-271 (309)
 91 3niz_A Rhodanese family protei 100.0 3.1E-38   1E-42  262.7  18.3  194    1-225    37-233 (311)
 92 3tki_A Serine/threonine-protei 100.0 2.2E-38 7.6E-43  264.9  16.9  214    1-244    23-243 (323)
 93 2y7j_A Phosphorylase B kinase  100.0 1.1E-37 3.8E-42  264.8  21.5  219    1-245   110-342 (365)
 94 3hko_A Calcium/calmodulin-depe 100.0 1.8E-38 6.1E-43  267.2  16.4  217    1-245    42-313 (345)
 95 3ttj_A Mitogen-activated prote 100.0 1.2E-38 4.3E-43  278.6  15.9  194    1-226    78-277 (464)
 96 1ob3_A PFPK5, cell division co 100.0 2.7E-38 9.3E-43  260.0  16.9  194    1-225    18-214 (288)
 97 3gbz_A Kinase, CMGC CDK; ssgci 100.0   2E-38 6.7E-43  265.8  15.8  196    1-226    50-252 (329)
 98 3byv_A Rhoptry kinase; malaria 100.0 1.2E-39   4E-44  278.1   8.3  210    1-244    89-341 (377)
 99 4agu_A Cyclin-dependent kinase 100.0 6.5E-38 2.2E-42  260.1  18.4  195    1-224    19-215 (311)
100 3dls_A PAS domain-containing s 100.0 2.2E-38 7.4E-43  266.3  15.5  209    1-244    40-256 (335)
101 3tt0_A Basic fibroblast growth 100.0 1.4E-37 4.7E-42  265.8  20.7  214    1-244    85-327 (382)
102 3l9p_A Anaplastic lymphoma kin 100.0 2.2E-38 7.4E-43  269.4  15.6  214    1-244    87-320 (367)
103 4aaa_A Cyclin-dependent kinase 100.0 9.5E-38 3.2E-42  261.7  19.1  196    1-225    41-238 (331)
104 4hcu_A Tyrosine-protein kinase 100.0 5.5E-38 1.9E-42  255.6  16.9  211    1-244    26-241 (269)
105 3is5_A Calcium-dependent prote 100.0 1.8E-37 6.2E-42  254.8  20.1  212    1-244    38-260 (285)
106 2w5a_A Serine/threonine-protei 100.0 2.3E-38 7.8E-43  258.9  14.5  216    1-245    22-250 (279)
107 2qol_A Ephrin receptor; recept 100.0 5.1E-38 1.8E-42  267.7  17.0  214    1-244    61-284 (373)
108 4euu_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43  264.3  14.2  195    1-226    25-241 (319)
109 2ac3_A MAP kinase-interacting  100.0 9.3E-38 3.2E-42  259.8  18.1  214    1-245    29-278 (316)
110 2ivs_A Proto-oncogene tyrosine 100.0 6.8E-38 2.3E-42  260.1  17.1  214    1-244    39-286 (314)
111 2fst_X Mitogen-activated prote 100.0 5.2E-38 1.8E-42  267.1  16.7  192    1-225    45-243 (367)
112 3lm5_A Serine/threonine-protei 100.0 1.6E-37 5.5E-42  260.0  19.0  214    1-244    45-269 (327)
113 3dtc_A Mitogen-activated prote 100.0   1E-37 3.6E-42  254.0  17.2  213    1-245    23-249 (271)
114 2izr_A Casein kinase I isoform 100.0 3.6E-38 1.2E-42  264.2  14.8  209    1-244    25-256 (330)
115 1phk_A Phosphorylase kinase; g 100.0 3.9E-37 1.3E-41  253.9  20.8  218    1-244    33-265 (298)
116 1opk_A P150, C-ABL, proto-onco 100.0 3.8E-38 1.3E-42  277.7  15.6  212    1-244   236-453 (495)
117 2wqm_A Serine/threonine-protei 100.0 4.7E-37 1.6E-41  255.0  21.0  216    1-244    48-272 (310)
118 3com_A Serine/threonine-protei 100.0 2.3E-37 7.7E-42  257.2  19.1  211    1-244    45-260 (314)
119 1ua2_A CAK, cell division prot 100.0 9.1E-38 3.1E-42  263.4  16.9  197    1-226    26-227 (346)
120 3kfa_A Tyrosine-protein kinase 100.0 1.1E-37 3.8E-42  255.9  16.5  212    1-244    29-246 (288)
121 3qup_A Tyrosine-protein kinase 100.0 1.1E-37 3.8E-42  260.2  16.6  216    1-245    39-274 (323)
122 3vhe_A Vascular endothelial gr 100.0 4.3E-38 1.5E-42  266.2  14.3  214    1-244    38-330 (359)
123 3mtl_A Cell division protein k 100.0 3.8E-38 1.3E-42  263.5  13.8  195    1-226    18-215 (324)
124 1k9a_A Carboxyl-terminal SRC k 100.0 1.7E-37 5.7E-42  270.6  18.3  207    1-245   209-421 (450)
125 1fvr_A Tyrosine-protein kinase 100.0 1.7E-37 5.7E-42  259.7  17.5  214    1-245    41-276 (327)
126 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.4E-37 8.3E-42  251.5  17.7  211    1-244    24-239 (268)
127 1p4o_A Insulin-like growth fac 100.0 2.6E-37 8.8E-42  257.7  17.7  214    1-244    41-274 (322)
128 4fvq_A Tyrosine-protein kinase 100.0 1.4E-37 4.7E-42  255.5  15.7  208    1-244    24-250 (289)
129 3eb0_A Putative uncharacterize 100.0 3.2E-37 1.1E-41  263.5  18.6  188    1-225    23-255 (383)
130 3llt_A Serine/threonine kinase 100.0 5.7E-37   2E-41  259.6  19.9  211    1-227    51-274 (360)
131 3mi9_A Cell division protein k 100.0   4E-37 1.4E-41  259.8  18.9  196    1-226    33-243 (351)
132 1vzo_A Ribosomal protein S6 ki 100.0 9.3E-38 3.2E-42  264.4  15.0  217    1-245    70-299 (355)
133 4f0f_A Serine/threonine-protei 100.0 7.2E-37 2.5E-41  251.1  19.6  214    1-244    35-264 (287)
134 3gen_A Tyrosine-protein kinase 100.0 3.7E-37 1.3E-41  252.3  17.8  211    1-244    40-255 (283)
135 3p1a_A MYT1 kinase, membrane-a 100.0 2.8E-37 9.7E-42  256.8  17.1  210    1-244    73-286 (311)
136 2pvf_A Fibroblast growth facto 100.0 3.9E-37 1.3E-41  258.3  18.0  214    1-244    51-293 (334)
137 2clq_A Mitogen-activated prote 100.0 3.9E-37 1.3E-41  253.4  17.4  214    1-245    38-261 (295)
138 3kvw_A DYRK2, dual specificity 100.0 3.5E-37 1.2E-41  267.1  17.9  192    1-225   113-312 (429)
139 1mp8_A Focal adhesion kinase 1 100.0 2.3E-37   8E-42  253.5  15.8  213    1-244    31-251 (281)
140 2xrw_A Mitogen-activated prote 100.0 3.7E-37 1.3E-41  262.2  17.2  194    1-226    41-240 (371)
141 1rjb_A FL cytokine receptor; k 100.0 1.6E-37 5.6E-42  261.3  14.9  215    1-245    61-310 (344)
142 2x7f_A TRAF2 and NCK-interacti 100.0 9.3E-37 3.2E-41  254.8  19.3  212    1-244    40-268 (326)
143 3rp9_A Mitogen-activated prote 100.0 4.2E-37 1.4E-41  268.6  17.9  186    1-216    69-299 (458)
144 3ugc_A Tyrosine-protein kinase 100.0   2E-37 6.8E-42  255.5  14.9  214    1-245    26-267 (295)
145 2pml_X PFPK7, Ser/Thr protein  100.0   3E-37   1E-41  259.9  16.3  213    1-245    47-305 (348)
146 1u59_A Tyrosine-protein kinase 100.0 6.2E-37 2.1E-41  251.7  17.8  213    1-244    26-247 (287)
147 3n9x_A Phosphotransferase; mal 100.0 8.6E-37 2.9E-41  264.9  19.6  178    1-208    42-248 (432)
148 2r3i_A Cell division protein k 100.0 5.9E-37   2E-41  252.9  17.7  195    1-225    19-217 (299)
149 1mqb_A Ephrin type-A receptor  100.0 7.5E-37 2.6E-41  256.6  18.6  214    1-244    60-284 (333)
150 2wtk_C Serine/threonine-protei 100.0 5.6E-37 1.9E-41  253.7  17.5  216    1-245    21-246 (305)
151 3q60_A ROP5B; pseudokinase, tr 100.0 5.8E-38   2E-42  267.0  11.7  215    1-245    78-335 (371)
152 1csn_A Casein kinase-1; phosph 100.0 7.9E-37 2.7E-41  251.9  18.2  210    1-244    26-258 (298)
153 2j7t_A Serine/threonine-protei 100.0 1.3E-37 4.6E-42  257.1  13.5  213    1-244    35-257 (302)
154 3kex_A Receptor tyrosine-prote 100.0 1.2E-37   4E-42  260.6  13.3  213    1-244    29-251 (325)
155 1qcf_A Haematopoetic cell kina 100.0 2.9E-37   1E-41  269.4  16.3  211    1-245   204-420 (454)
156 3kmu_A ILK, integrin-linked ki 100.0 8.3E-37 2.8E-41  248.2  17.9  208    1-244    26-245 (271)
157 3qyz_A Mitogen-activated prote 100.0 6.1E-37 2.1E-41  260.1  17.8  194    1-225    43-245 (364)
158 1t46_A HOMO sapiens V-KIT hard 100.0 3.1E-37 1.1E-41  256.0  15.6  214    1-244    39-282 (313)
159 1t4h_A Serine/threonine-protei 100.0 3.6E-36 1.2E-40  247.4  21.9  212    1-244    42-264 (290)
160 2ozo_A Tyrosine-protein kinase 100.0 4.8E-37 1.6E-41  276.9  17.9  213    1-244   352-573 (613)
161 3i6u_A CDS1, serine/threonine- 100.0 5.7E-37   2E-41  265.0  17.7  217    1-244   151-381 (419)
162 1x8b_A WEE1HU, WEE1-like prote 100.0   2E-36 6.7E-41  247.9  19.7  226    1-245    27-262 (289)
163 2wei_A Calmodulin-domain prote 100.0   2E-36 6.9E-41  248.6  19.4  214    1-245    38-259 (287)
164 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.7E-37 1.3E-41  261.4  15.4  182    1-213    81-286 (365)
165 2i6l_A Mitogen-activated prote 100.0 2.9E-36   1E-40  250.6  20.5  194    1-226    27-239 (320)
166 3t9t_A Tyrosine-protein kinase 100.0 6.7E-37 2.3E-41  248.5  16.1  211    1-244    24-239 (267)
167 2yex_A Serine/threonine-protei 100.0 2.6E-36   9E-41  246.2  19.7  214    1-244    23-243 (276)
168 3fme_A Dual specificity mitoge 100.0   2E-36 6.7E-41  248.6  19.1  213    1-244    23-248 (290)
169 4fl3_A Tyrosine-protein kinase 100.0 4.5E-37 1.5E-41  277.9  16.6  214    1-244   385-606 (635)
170 3qd2_B Eukaryotic translation  100.0 5.4E-37 1.8E-41  256.3  15.9  212    1-244    22-307 (332)
171 3op5_A Serine/threonine-protei 100.0 3.1E-37 1.1E-41  261.9  14.7  189    1-215    51-264 (364)
172 2v62_A Serine/threonine-protei 100.0 4.6E-37 1.6E-41  259.1  15.6  218    1-244    53-303 (345)
173 3brb_A Proto-oncogene tyrosine 100.0 1.2E-36 4.2E-41  252.8  17.9  215    1-244    50-283 (313)
174 1xbb_A Tyrosine-protein kinase 100.0   8E-37 2.7E-41  251.5  16.5  214    1-244    33-254 (291)
175 3eqc_A Dual specificity mitoge 100.0 1.2E-36 4.2E-41  257.7  18.1  187    1-219    49-237 (360)
176 1j1b_A Glycogen synthase kinas 100.0 9.5E-37 3.2E-41  263.7  17.6  188    1-225    70-270 (420)
177 3soc_A Activin receptor type-2 100.0 3.8E-37 1.3E-41  257.2  14.4  181    1-215    40-241 (322)
178 3pls_A Macrophage-stimulating  100.0 3.5E-36 1.2E-40  248.0  19.9  214    1-244    37-262 (298)
179 3poz_A Epidermal growth factor 100.0 5.8E-37   2E-41  256.6  15.4  213    1-244    31-253 (327)
180 3lb7_A RAF proto-oncogene seri 100.0 1.1E-36 3.7E-41  252.9  16.9  211    1-244    52-275 (307)
181 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.2E-37 2.5E-41  266.8  15.6  210    1-244   200-415 (452)
182 1blx_A Cyclin-dependent kinase 100.0 3.8E-36 1.3E-40  251.0  19.4  197    1-225    27-232 (326)
183 4exu_A Mitogen-activated prote 100.0 1.8E-36 6.3E-41  257.8  17.4  191    1-225    58-255 (371)
184 4e7w_A Glycogen synthase kinas 100.0 1.3E-36 4.6E-41  260.7  16.6  188    1-225    56-255 (394)
185 2yfx_A Tyrosine-protein kinase 100.0 1.5E-36 5.1E-41  253.9  16.5  214    1-244    46-279 (327)
186 4eut_A Serine/threonine-protei 100.0 1.8E-37 6.3E-42  266.2  11.1  197    1-228    25-243 (396)
187 2i1m_A Macrophage colony-stimu 100.0 8.6E-37   3E-41  255.8  14.6  214    1-244    62-301 (333)
188 2b9h_A MAP kinase FUS3, mitoge 100.0   3E-36   1E-40  254.3  17.7  193    1-224    27-235 (353)
189 3lzb_A Epidermal growth factor 100.0 1.9E-36 6.4E-41  253.6  15.6  213    1-244    31-253 (327)
190 2zmd_A Dual specificity protei 100.0 7.9E-36 2.7E-40  255.6  19.7  212    1-244    72-302 (390)
191 2ycf_A Serine/threonine-protei 100.0 1.9E-36 6.6E-41  252.7  15.1  217    1-244    26-256 (322)
192 1qpc_A LCK kinase; alpha beta  100.0 5.6E-36 1.9E-40  244.8  17.6  210    1-244    29-244 (279)
193 3dbq_A Dual specificity protei 100.0 8.4E-36 2.9E-40  251.1  19.0  212    1-244    25-255 (343)
194 1u46_A ACK-1, activated CDC42  100.0 3.6E-36 1.2E-40  247.1  16.4  215    1-244    34-259 (291)
195 4e5w_A Tyrosine-protein kinase 100.0   3E-36   1E-40  249.0  15.8  215    1-245    37-278 (302)
196 3uzp_A CKI-delta, CKID, casein 100.0 4.3E-36 1.5E-40  247.3  16.6  210    1-244    25-255 (296)
197 3cc6_A Protein tyrosine kinase 100.0 5.2E-36 1.8E-40  245.4  16.9  213    1-244    28-248 (281)
198 2vwi_A Serine/threonine-protei 100.0 1.2E-36   4E-41  251.3  13.2  214    1-244    31-269 (303)
199 3coi_A Mitogen-activated prote 100.0 6.4E-36 2.2E-40  252.7  17.9  191    1-225    40-237 (353)
200 3lxp_A Non-receptor tyrosine-p 100.0 2.4E-36 8.2E-41  251.9  15.1  213    2-244    52-285 (318)
201 3f66_A Hepatocyte growth facto 100.0 5.7E-36   2E-40  247.0  17.1  214    1-244    41-266 (298)
202 1byg_A CSK, protein (C-termina 100.0 2.6E-36 8.8E-41  246.8  14.8  206    1-244    37-248 (278)
203 3c1x_A Hepatocyte growth facto 100.0 1.9E-36 6.6E-41  257.9  14.5  214    1-244   105-330 (373)
204 2xir_A Vascular endothelial gr 100.0 1.9E-36 6.6E-41  251.5  13.7  214    1-244    43-285 (316)
205 3lxl_A Tyrosine-protein kinase 100.0   4E-36 1.4E-40  251.3  15.5  213    1-244    39-278 (327)
206 4hgt_A Casein kinase I isoform 100.0   4E-36 1.4E-40  247.3  15.3  210    1-244    25-255 (296)
207 3nsz_A CK II alpha, casein kin 100.0 2.1E-35 7.1E-40  247.0  19.3  176    1-213    52-232 (330)
208 2h8h_A Proto-oncogene tyrosine 100.0 3.1E-36 1.1E-40  267.8  14.6  211    1-245   283-499 (535)
209 1wak_A Serine/threonine-protei 100.0 6.5E-36 2.2E-40  255.6  15.9  201    1-216    53-297 (397)
210 3e3p_A Protein kinase, putativ 100.0 6.7E-36 2.3E-40  252.8  15.6  193    1-226    39-246 (360)
211 2a19_B Interferon-induced, dou 100.0 1.4E-35 4.7E-40  242.7  16.9  204    1-244    27-249 (284)
212 1z57_A Dual specificity protei 100.0   2E-35 6.7E-40  247.3  18.1  191    1-224    30-246 (339)
213 3an0_A Dual specificity mitoge 100.0 4.1E-36 1.4E-40  252.5  13.6  213    1-244    67-292 (340)
214 2buj_A Serine/threonine-protei 100.0 9.1E-36 3.1E-40  247.8  15.4  213    1-244    45-281 (317)
215 3og7_A AKAP9-BRAF fusion prote 100.0 1.1E-35 3.8E-40  244.5  15.7  211    1-244    40-263 (289)
216 3fhr_A MAP kinase-activated pr 100.0 5.9E-36   2E-40  251.5  14.2  207    1-244    45-269 (336)
217 3rgf_A Cyclin-dependent kinase 100.0   1E-35 3.5E-40  256.0  15.9  183    1-217    37-241 (405)
218 3ll6_A Cyclin G-associated kin 100.0 2.7E-35 9.3E-40  246.4  17.5  210    1-244    44-283 (337)
219 2qkw_B Protein kinase; three-h 100.0 8.6E-36 2.9E-40  248.7  14.4  183    1-215    55-244 (321)
220 2iwi_A Serine/threonine-protei 100.0 4.2E-36 1.4E-40  249.5  12.3  212    1-245    47-266 (312)
221 3q4u_A Activin receptor type-1 100.0 1.2E-35 4.1E-40  245.1  14.6  180    1-214    24-235 (301)
222 3pg1_A Mitogen-activated prote 100.0 2.8E-35 9.7E-40  249.3  17.1  197    1-225    38-247 (362)
223 3a99_A Proto-oncogene serine/t 100.0 4.6E-36 1.6E-40  250.4  12.0  209    1-245    59-276 (320)
224 3aln_A Dual specificity mitoge 100.0 2.8E-35 9.7E-40  246.1  16.6  213    1-244    38-267 (327)
225 2dyl_A Dual specificity mitoge 100.0   1E-34 3.6E-39  241.3  19.9  213    1-244    41-265 (318)
226 2eva_A TAK1 kinase - TAB1 chim 100.0 3.9E-35 1.3E-39  243.5  17.2  205    1-245    24-239 (307)
227 2jii_A Serine/threonine-protei 100.0 1.3E-35 4.5E-40  250.7  14.5  207    1-244    58-311 (352)
228 2j0j_A Focal adhesion kinase 1 100.0 3.9E-35 1.3E-39  266.1  18.2  214    1-245   406-627 (656)
229 1zy4_A Serine/threonine-protei 100.0 6.9E-35 2.4E-39  240.4  17.7  209    1-244    22-265 (303)
230 2vx3_A Dual specificity tyrosi 100.0   2E-34   7E-39  246.1  19.6  193    1-226    70-272 (382)
231 3mdy_A Bone morphogenetic prot 100.0 7.7E-35 2.6E-39  244.0  16.5  180    1-214    53-264 (337)
232 1q8y_A SR protein kinase; tran 100.0 2.9E-35 9.9E-40  249.9  14.0  183    1-216    35-239 (373)
233 2eu9_A Dual specificity protei 100.0 1.1E-34 3.9E-39  244.3  17.2  209    1-225    35-252 (355)
234 2w1i_A JAK2; chromosomal rearr 100.0 3.8E-35 1.3E-39  245.4  14.0  214    1-245    57-298 (326)
235 2nru_A Interleukin-1 receptor- 100.0 4.8E-35 1.6E-39  242.4  14.4  185    1-216    47-238 (307)
236 3sv0_A Casein kinase I-like; t 100.0   2E-34 6.8E-39  252.8  17.7  210    1-244    23-253 (483)
237 3uim_A Brassinosteroid insensi 100.0 3.4E-35 1.2E-39  245.4  12.1  182    1-213    46-236 (326)
238 3g2f_A Bone morphogenetic prot 100.0 9.3E-35 3.2E-39  243.6  13.4  178    1-212    29-235 (336)
239 1b6c_B TGF-B superfamily recep 100.0 4.2E-34 1.4E-38  240.0  15.4  179    1-215    58-270 (342)
240 3cek_A Dual specificity protei 100.0 1.7E-33 5.8E-38  233.9  18.3  212    1-244    44-274 (313)
241 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.2E-34 4.3E-39  241.1  11.5  211    1-244    49-277 (319)
242 3gxj_A TGF-beta receptor type- 100.0 7.2E-36 2.5E-40  246.6   2.9  178    1-214    19-230 (303)
243 2vuw_A Serine/threonine-protei 100.0 2.3E-35 7.9E-40  247.7   4.9  212    1-245    36-318 (336)
244 3uqc_A Probable conserved tran 100.0 6.8E-34 2.3E-38  233.9  12.6  189    1-245    47-242 (286)
245 3p23_A Serine/threonine-protei 100.0 2.1E-33   7E-38  243.5  15.1  180    5-219    43-237 (432)
246 2rio_A Serine/threonine-protei 100.0 5.7E-33   2E-37  241.0  16.9  219    1-244    31-277 (434)
247 3qa8_A MGC80376 protein; kinas 100.0 6.1E-34 2.1E-38  256.2  11.1  184    1-215    30-226 (676)
248 3m2w_A MAP kinase-activated pr 100.0 1.2E-32 4.1E-37  227.5  16.3  186    1-244    34-238 (299)
249 2pzi_A Probable serine/threoni 100.0 4.3E-33 1.5E-37  254.1  14.1  177    1-214    96-278 (681)
250 3dzo_A Rhoptry kinase domain;  100.0 2.2E-33 7.6E-38  242.1   9.2  207    1-244    94-345 (413)
251 4azs_A Methyltransferase WBDD; 100.0 1.7E-32 5.9E-37  244.9   7.5  177    3-208   252-434 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 1.5E-25 5.1E-30  199.0   3.5  177    1-213   352-539 (540)
253 1zar_A RIO2 kinase; serine kin  99.8 2.1E-21 7.2E-26  159.0   6.4  132    1-185   106-252 (282)
254 1zth_A RIO1 serine protein kin  99.6 1.6E-16 5.3E-21  128.4   6.2  125    1-161    63-218 (258)
255 4gyi_A RIO2 kinase; protein ki  99.4 7.2E-13 2.5E-17  112.1   7.1  128    1-161   111-264 (397)
256 3tm0_A Aminoglycoside 3'-phosp  98.9   3E-09   1E-13   85.4   9.2   94    1-105    30-123 (263)
257 1nd4_A Aminoglycoside 3'-phosp  98.7 3.2E-08 1.1E-12   78.8   8.8   92    1-107    36-127 (264)
258 3dxp_A Putative acyl-COA dehyd  98.6 2.5E-07 8.4E-12   77.6  10.0   99    1-105    54-157 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.4   3E-07   1E-11   75.4   5.6   90   11-106    41-133 (304)
260 3r70_A Aminoglycoside phosphot  97.8 0.00016 5.4E-09   59.5  10.2   89   10-108    57-146 (320)
261 4gkh_A Aminoglycoside 3'-phosp  97.8 0.00026   9E-09   56.4  11.0   96    1-107    41-136 (272)
262 3tdw_A Gentamicin resistance p  97.7  0.0007 2.4E-08   55.3  12.5   93   10-108    39-132 (306)
263 3ovc_A Hygromycin-B 4-O-kinase  97.1  0.0022 7.6E-08   53.7   8.6   88    2-106    58-146 (362)
264 3ats_A Putative uncharacterize  96.9  0.0026 8.9E-08   52.8   7.6   98   10-107    52-159 (357)
265 2olc_A MTR kinase, methylthior  96.3   0.013 4.6E-07   49.3   8.2   71    1-73     46-120 (397)
266 2q83_A YTAA protein; 2635576,   95.9   0.043 1.5E-06   44.8   9.1   66    1-75     48-118 (346)
267 3jr1_A Putative fructosamine-3  95.7    0.11 3.9E-06   42.3  11.0   81    9-108    58-138 (312)
268 3d1u_A Putative fructosamine-3  95.6   0.054 1.9E-06   43.6   8.5   86    1-107    31-116 (288)
269 2yle_A Protein spire homolog 1  95.3   0.071 2.4E-06   41.1   7.7  101   73-211    33-136 (229)
270 3dxq_A Choline/ethanolamine ki  94.0    0.18 6.2E-06   40.5   7.7   83   11-107    38-121 (301)
271 2pyw_A Uncharacterized protein  93.8    0.22 7.5E-06   42.2   8.2   68    1-72     50-122 (420)
272 3csv_A Aminoglycoside phosphot  93.5    0.33 1.1E-05   39.6   8.5   85   10-106    43-127 (333)
273 2ppq_A HSK, HK, homoserine kin  90.4     0.9 3.1E-05   36.6   7.5   60   11-75     46-110 (322)
274 3feg_A Choline/ethanolamine ki  87.8     2.5 8.6E-05   35.3   8.6   82   10-108    82-163 (379)
275 3f7w_A Putative fructosamine-3  80.9     9.3 0.00032   30.0   8.8   86    1-107    31-116 (288)
276 3i1a_A Spectinomycin phosphotr  76.3      20  0.0007   29.0   9.7   87    2-107    40-132 (339)
277 4ann_A ESSB; membrane protein,  72.9      22 0.00076   27.0   8.3  120   39-212    37-157 (215)
278 1zyl_A Hypothetical protein YI  72.6      12 0.00041   29.8   7.4   83    9-106    48-135 (328)
279 1nw1_A Choline kinase (49.2 KD  69.9      18  0.0006   30.6   8.0   80   10-107   105-184 (429)
280 3c5i_A Choline kinase; choline  66.9      30   0.001   28.1   8.7   79   11-106    67-145 (369)
281 2qg7_A Ethanolamine kinase PV0  65.4      28 0.00096   29.7   8.4   91    1-108   124-214 (458)
282 4ano_A ESSB; membrane protein,  64.0      42  0.0014   25.5   8.3  118   39-212    42-162 (219)
283 3mes_A Choline kinase; malaria  57.6      40  0.0014   28.4   7.9   82   10-108   102-183 (424)
284 3g15_A CK, chetk-alpha, cholin  48.9     7.4 0.00025   32.5   1.9   15  146-160   265-279 (401)
285 3cxl_A N-chimerin; SH2, RHO-GA  44.5     2.7 9.2E-05   36.1  -1.5   54    1-58    155-214 (463)
286 3f2s_A CK, chetk-alpha, cholin  37.7      76  0.0026   26.5   6.4   62   34-108   123-184 (401)
287 1zyl_A Hypothetical protein YI  35.0      29   0.001   27.5   3.4   29  105-160   194-222 (328)
288 3i1a_A Spectinomycin phosphotr  27.0      33  0.0011   27.7   2.4   30  106-160   206-235 (339)
289 3oja_A Leucine-rich immune mol  23.1       5 0.00017   34.5  -3.5   25   36-60    327-351 (487)

No 1  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=2.5e-54  Score=357.08  Aligned_cols=217  Identities=32%  Similarity=0.578  Sum_probs=193.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||||++.+.........+.+.+|   +++++.++||||++++++|.+++.+|+|||||+||+|.++++
T Consensus        48 V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E---~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~  124 (311)
T 4aw0_A           48 VVLARELATSREYAIKILEKRHIIKENKVPYVTRE---RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR  124 (311)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHH---HHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHH---HHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHH
Confidence            89999999999999999987544333444455444   777889999999999999999999999999999999999985


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       .+.+++..++.++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||+|
T Consensus       125 ~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHR---DlKPeNI----------------------Ll~~~g~vKl~DFGla  179 (311)
T 4aw0_A          125 KIGSFDETCTRFYTAEIVSALEYLHGKGIIHR---DLKPENI----------------------LLNEDMHIQITDFGTA  179 (311)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECTTSCEEECCCTTC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCCccC---CCCHHHe----------------------EEcCCCCEEEEEcCCc
Confidence             4689999999999999999999999999999   9999999                      8889999999999999


Q ss_pred             cCCCCC--CCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCCh
Q psy3347         160 KEGMGF--GDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSL  237 (245)
Q Consensus       160 ~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~  237 (245)
                      +.....  .....+.+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+.+..+....+..+...+|+.+|+
T Consensus       180 ~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~  259 (311)
T 4aw0_A          180 KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP  259 (311)
T ss_dssp             EECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCH
T ss_pred             eecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccCH
Confidence            864322  223556799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHhhhcC
Q psy3347         238 EAIAIMRR  245 (245)
Q Consensus       238 ~~~~li~~  245 (245)
                      ++++||++
T Consensus       260 ~~~dli~~  267 (311)
T 4aw0_A          260 KARDLVEK  267 (311)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999864


No 2  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=9.6e-53  Score=352.40  Aligned_cols=214  Identities=24%  Similarity=0.435  Sum_probs=188.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.||+.||||++......   ..+.+.+   |+++|+.++||||++++++|.+++.+|+|||||+||+|.+++.
T Consensus        90 V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~---Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~  163 (346)
T 4fih_A           90 VCIATVRSSGKLVAVKKMDLRKQQ---RRELLFN---EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT  163 (346)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGCS---SGGGGHH---HHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEecCchh---HHHHHHH---HHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHH
Confidence            899999999999999999764322   2233444   4777889999999999999999999999999999999999998


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCcc
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK  160 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~  160 (245)
                      ...+++..+..++.|++.||+|||++||+||   ||||+||                      +++.+|.+||+|||+|+
T Consensus       164 ~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHR---DlKp~NI----------------------Ll~~~g~vKl~DFGla~  218 (346)
T 4fih_A          164 HTRMNEEQIAAVCLAVLQALSVLHAQGVIHR---DIKSDSI----------------------LLTHDGRVKLSDFGFCA  218 (346)
T ss_dssp             HSCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTCCEEECCCTTCE
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---cCCHHHE----------------------EECCCCCEEEecCcCce
Confidence            8899999999999999999999999999999   9999999                      88999999999999998


Q ss_pred             CCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCccc---CCCCCCh
Q psy3347         161 EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR---YPRFLSL  237 (245)
Q Consensus       161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~---~p~~~~~  237 (245)
                      ............+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..+....+.....+   .+..+|+
T Consensus       219 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~  298 (346)
T 4fih_A          219 QVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSP  298 (346)
T ss_dssp             ECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCH
T ss_pred             ecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCH
Confidence            6555555566789999999999999999999999999999999999999999999999988888765432   2457899


Q ss_pred             hHHhhhcC
Q psy3347         238 EAIAIMRR  245 (245)
Q Consensus       238 ~~~~li~~  245 (245)
                      ++++||++
T Consensus       299 ~~~dli~~  306 (346)
T 4fih_A          299 SLKGFLDR  306 (346)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999863


No 3  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=3.2e-52  Score=339.77  Aligned_cols=215  Identities=31%  Similarity=0.534  Sum_probs=177.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh-
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI-   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~-   79 (245)
                      ||+|+++.+|+.||+|++.+.........+.+.+|   +++++.++||||+++++++.+++..|+||||+ +|+|.+++ 
T Consensus        29 V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E---i~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~  104 (275)
T 3hyh_A           29 VKLAYHTTTGQKVALKIINKKVLAKSDMQGRIERE---ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIV  104 (275)
T ss_dssp             EEEEECTTTCCEEEEEEEECC------CHHHHHHH---HHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHH---HHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHH
Confidence            79999999999999999987654443334445444   77788899999999999999999999999999 56888777 


Q ss_pred             hhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          80 HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        80 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                      +++.+++..++.++.|++.||+|||++||+||   |+||+||                      +++.++.+||+|||+|
T Consensus       105 ~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHR---DiKP~NI----------------------Ll~~~~~vkl~DFGla  159 (275)
T 3hyh_A          105 QRDKMSEQEARRFFQQIISAVEYCHRHKIVHR---DLKPENL----------------------LLDEHLNVKIADFGLS  159 (275)
T ss_dssp             HSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCTTTE----------------------EECTTCCEEECCSSCC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---cCChHHe----------------------EECCCCCEEEeecCCC
Confidence            45689999999999999999999999999999   9999999                      8889999999999999


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChh
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE  238 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (245)
                      +... ........+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+..+....+..+...+|+.+|++
T Consensus       160 ~~~~-~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~  238 (275)
T 3hyh_A          160 NIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPG  238 (275)
T ss_dssp             ----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHH
T ss_pred             eecC-CCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHH
Confidence            7532 2333456789999999999998876 5799999999999999999999999999999999999988999999999


Q ss_pred             HHhhhcC
Q psy3347         239 AIAIMRR  245 (245)
Q Consensus       239 ~~~li~~  245 (245)
                      +++||++
T Consensus       239 ~~~li~~  245 (275)
T 3hyh_A          239 AAGLIKR  245 (275)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999864


No 4  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1.7e-52  Score=351.37  Aligned_cols=216  Identities=24%  Similarity=0.455  Sum_probs=187.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||||++...... ....+.+.   +|+++++.++||||++++++|.+++.+|+|||||+||+|.+++.
T Consensus        40 V~~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~---~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~  115 (350)
T 4b9d_A           40 AILVKSTEDGRQYVIKEINISRMS-SKEREESR---REVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRIN  115 (350)
T ss_dssp             EEEEEETTTCCEEEEEEEECTTSC-HHHHHHHH---HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEehHHCC-HHHHHHHH---HHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHH
Confidence            899999999999999999875432 23344444   45777889999999999999999999999999999999999985


Q ss_pred             h---cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          81 A---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        81 ~---~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      .   ..+++..++.++.|++.||+|||++||+||   ||||+||                      +++.+|.+||+|||
T Consensus       116 ~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHR---DlKp~NI----------------------Ll~~~g~vKl~DFG  170 (350)
T 4b9d_A          116 AQKGVLFQEDQILDWFVQICLALKHVHDRKILHR---DIKSQNI----------------------FLTKDGTVQLGDFG  170 (350)
T ss_dssp             HTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEET---TCCGGGE----------------------EECTTCCEEECSTT
T ss_pred             HcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec---cCCHHHE----------------------EECCCCCEEEcccc
Confidence            3   346899999999999999999999999999   9999999                      88899999999999


Q ss_pred             CccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcc-cCCCCCC
Q psy3347         158 LCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEV-RYPRFLS  236 (245)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~-~~p~~~~  236 (245)
                      +|+............+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..+...++..+.. +.|..+|
T Consensus       171 la~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s  250 (350)
T 4b9d_A          171 IARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYS  250 (350)
T ss_dssp             EESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSC
T ss_pred             cceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCC
Confidence            998643332233456899999999999999999999999999999999999999999999999999988765 4578899


Q ss_pred             hhHHhhhcC
Q psy3347         237 LEAIAIMRR  245 (245)
Q Consensus       237 ~~~~~li~~  245 (245)
                      +++++||++
T Consensus       251 ~~~~~li~~  259 (350)
T 4b9d_A          251 YDLRSLVSQ  259 (350)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999863


No 5  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1e-52  Score=347.13  Aligned_cols=216  Identities=38%  Similarity=0.700  Sum_probs=185.6

Q ss_pred             CEeEEEe---cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYR---NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|++.   .+++.||+|++++....... ...+.   +|+++++.++||||++++++|.+++..|+|||||+||+|.+
T Consensus        40 Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~~---~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~  115 (304)
T 3ubd_A           40 VFLVKKISGSDARQLYAMKVLKKATLKVRD-RVRTK---MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT  115 (304)
T ss_dssp             EEEEEECSSTTTTCEEEEEEEESEEEEEEE-CC---------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHH
T ss_pred             EEEEEEccCCCCCEEEEEEEEehHHcChHH-HHHHH---HHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHH
Confidence            7999874   47899999999875433222 22333   34677889999999999999999999999999999999999


Q ss_pred             hhh-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeec
Q psy3347          78 HIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADF  156 (245)
Q Consensus        78 ~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df  156 (245)
                      +++ .+.+++..++.++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+||
T Consensus       116 ~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHR---DlKp~NI----------------------Ll~~~g~vKl~DF  170 (304)
T 3ubd_A          116 RLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYR---DLKPENI----------------------LLDEEGHIKLTDF  170 (304)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---SCCGGGE----------------------EECTTSCEEEESS
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCC---CCCHHHe----------------------EEcCCCCEEeccc
Confidence            985 4679999999999999999999999999999   9999999                      8889999999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCC
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS  236 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~  236 (245)
                      |+|+............+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..+....+.....++|+.+|
T Consensus       171 Gla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s  250 (304)
T 3ubd_A          171 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLS  250 (304)
T ss_dssp             EEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSC
T ss_pred             ccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCcCC
Confidence            99986544444556778999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHhhhcC
Q psy3347         237 LEAIAIMRR  245 (245)
Q Consensus       237 ~~~~~li~~  245 (245)
                      +++++||++
T Consensus       251 ~~~~~li~~  259 (304)
T 3ubd_A          251 PEAQSLLRM  259 (304)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999864


No 6  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=9.8e-52  Score=354.28  Aligned_cols=214  Identities=25%  Similarity=0.449  Sum_probs=189.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.||+.||||++.....   ...+.+.+|   +++|+.++||||++++++|.+++.+|+|||||+||+|.++++
T Consensus       167 V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~E---i~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~  240 (423)
T 4fie_A          167 VCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNE---VVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT  240 (423)
T ss_dssp             EEEEEETTTCCEEEEEEEESTTC---SSGGGHHHH---HHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEeccch---hHHHHHHHH---HHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHh
Confidence            89999999999999999986432   223344444   777889999999999999999999999999999999999998


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCcc
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK  160 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~  160 (245)
                      ...+++..+..++.|++.||+|||++||+||   ||||+||                      +++.+|.+||+|||+|+
T Consensus       241 ~~~l~e~~~~~~~~qil~aL~ylH~~~IiHR---DiKp~NI----------------------Ll~~~g~vKl~DFGla~  295 (423)
T 4fie_A          241 HTRMNEEQIAAVCLAVLQALSVLHAQGVIHR---DIKSDSI----------------------LLTHDGRVKLSDFGFCA  295 (423)
T ss_dssp             HSCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSTTTE----------------------EECTTCCEEECCCTTCE
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCCeecc---cCCHHHE----------------------EEcCCCCEEEecCccce
Confidence            8899999999999999999999999999999   9999999                      88999999999999998


Q ss_pred             CCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCccc---CCCCCCh
Q psy3347         161 EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR---YPRFLSL  237 (245)
Q Consensus       161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~---~p~~~~~  237 (245)
                      ............+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..+.+..+.....+   .+..+|+
T Consensus       296 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~  375 (423)
T 4fie_A          296 QVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSP  375 (423)
T ss_dssp             ECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCH
T ss_pred             ECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCH
Confidence            6555555566789999999999999999999999999999999999999999999999988888765432   3567899


Q ss_pred             hHHhhhcC
Q psy3347         238 EAIAIMRR  245 (245)
Q Consensus       238 ~~~~li~~  245 (245)
                      ++++||++
T Consensus       376 ~~~dli~~  383 (423)
T 4fie_A          376 SLKGFLDR  383 (423)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999863


No 7  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=6.3e-51  Score=340.38  Aligned_cols=209  Identities=22%  Similarity=0.318  Sum_probs=179.7

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||||+++.....           .+++.+++.++||||++++++|.+++..|+|||||+||+|.++++
T Consensus        74 Vy~a~~~~~g~~vAiK~i~~~~~~-----------~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~  142 (336)
T 4g3f_A           74 VHRMKDKQTGFQCAVKKVRLEVFR-----------VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK  142 (336)
T ss_dssp             EEEEEETTTCCEEEEEEEETTTCC-----------THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEECHHHhH-----------HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHH
Confidence            899999999999999999864211           235778899999999999999999999999999999999999995


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCC-ceEEeecCC
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG-YVKIADFGL  158 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~kl~Dfg~  158 (245)
                       .+.+++..+..++.|++.||+|||++||+||   ||||+||                      +++.+| .+||+|||+
T Consensus       143 ~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHR---DlKp~NI----------------------Ll~~~g~~vKl~DFGl  197 (336)
T 4g3f_A          143 QMGCLPEDRALYYLGQALEGLEYLHTRRILHG---DVKADNV----------------------LLSSDGSRAALCDFGH  197 (336)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHTTTEECS---CCCGGGE----------------------EECTTSCCEEECCCTT
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCceec---ccCHHHE----------------------EEeCCCCEEEEeeCCC
Confidence             4679999999999999999999999999999   9999999                      888877 699999999


Q ss_pred             ccCCCCCCC-----CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCccc---
Q psy3347         159 CKEGMGFGD-----RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR---  230 (245)
Q Consensus       159 ~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~---  230 (245)
                      |+.......     .....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..+....+.....+   
T Consensus       198 a~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~  277 (336)
T 4g3f_A          198 ALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIRE  277 (336)
T ss_dssp             CEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGG
T ss_pred             CeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchh
Confidence            985432221     123457999999999999999999999999999999999999999988777777778776543   


Q ss_pred             CCCCCChhHHhhhcC
Q psy3347         231 YPRFLSLEAIAIMRR  245 (245)
Q Consensus       231 ~p~~~~~~~~~li~~  245 (245)
                      +|..+++++++||++
T Consensus       278 ~~~~~s~~~~~li~~  292 (336)
T 4g3f_A          278 IPPSCAPLTAQAIQE  292 (336)
T ss_dssp             SCTTSCHHHHHHHHH
T ss_pred             cCccCCHHHHHHHHH
Confidence            578899999999863


No 8  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=4e-49  Score=324.00  Aligned_cols=213  Identities=23%  Similarity=0.390  Sum_probs=175.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee----CCeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT----EAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~----~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|+++.+|+.||+|++...... ....+.+.   +++++++.++||||++++++|..    ++.+|+|||||++|+|.
T Consensus        42 Vy~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~---~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~  117 (290)
T 3fpq_A           42 VYKGLDTETTVEVAWCELQDRKLT-KSERQRFK---EEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLK  117 (290)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHH---HHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHH
T ss_pred             EEEEEECCCCeEEEEEEEchhhCC-HHHHHHHH---HHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHH
Confidence            899999999999999999865422 23334444   45788889999999999999865    35689999999999999


Q ss_pred             hhhh-hcCCChHHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccC-CCCceE
Q psy3347          77 MHIH-ADVFSEPRAVFYAACVVLGLQYLHESR--IIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVND-TEGYVK  152 (245)
Q Consensus        77 ~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k  152 (245)
                      ++++ .+.+++..+..++.|++.||+|||++|  |+||   |+||+||                      +++ .+|.+|
T Consensus       118 ~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHR---DlKp~NI----------------------Ll~~~~g~vK  172 (290)
T 3fpq_A          118 TYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHR---DLKCDNI----------------------FITGPTGSVK  172 (290)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCC---CCCGGGE----------------------EESSTTSCEE
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEec---ccChhhe----------------------eEECCCCCEE
Confidence            9995 467999999999999999999999999  9999   9999998                      776 478999


Q ss_pred             EeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCcc--
Q psy3347         153 IADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE-EEVFDSIVNDEV--  229 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~-~~~~~~~~~~~~--  229 (245)
                      |+|||+|+...  .......+||+.|||||++.+ +|+.++|||||||++|||+||+.||.+... ......+..+..  
T Consensus       173 l~DFGla~~~~--~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~  249 (290)
T 3fpq_A          173 IGDLGLATLKR--ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA  249 (290)
T ss_dssp             ECCTTGGGGCC--TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG
T ss_pred             EEeCcCCEeCC--CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCC
Confidence            99999997532  223456789999999999865 699999999999999999999999976544 455555555433  


Q ss_pred             cCCCCCChhHHhhhcC
Q psy3347         230 RYPRFLSLEAIAIMRR  245 (245)
Q Consensus       230 ~~p~~~~~~~~~li~~  245 (245)
                      .+|..+++++++||++
T Consensus       250 ~~~~~~~~~~~~li~~  265 (290)
T 3fpq_A          250 SFDKVAIPEVKEIIEG  265 (290)
T ss_dssp             GGGGCCCHHHHHHHHH
T ss_pred             CCCccCCHHHHHHHHH
Confidence            3467889999999863


No 9  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=7.8e-50  Score=330.11  Aligned_cols=214  Identities=22%  Similarity=0.405  Sum_probs=181.7

Q ss_pred             CEeEEEe-----cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCch
Q psy3347           1 VILSQYR-----NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L   75 (245)
                      ||+|++.     .+|+.||||+++...   ....+.+.   +|++++++++||||++++|+|.+++..|+|||||++|+|
T Consensus        29 Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~f~---~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L  102 (299)
T 4asz_A           29 VFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFH---REAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDL  102 (299)
T ss_dssp             EEEEEECSCC----CEEEEEEEECSCC---HHHHHHHH---HHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBH
T ss_pred             EEEEEECCcccCCCCEEEEEEEeCCCC---hHHHHHHH---HHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcH
Confidence            7999875     468899999997542   23334454   457889999999999999999999999999999999999


Q ss_pred             hhhhhh--------------cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchh
Q psy3347          76 MMHIHA--------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIK  141 (245)
Q Consensus        76 ~~~~~~--------------~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~  141 (245)
                      .++++.              ..+++..+..++.|++.||+|||+++|+||   |+||+||                    
T Consensus       103 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHR---DlKp~NI--------------------  159 (299)
T 4asz_A          103 NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHR---DLATRNC--------------------  159 (299)
T ss_dssp             HHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE--------------------
T ss_pred             HHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC---ccCHhhE--------------------
Confidence            999853              258999999999999999999999999999   9999998                    


Q ss_pred             ccccCCCCceEEeecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHH
Q psy3347         142 LTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEE  218 (245)
Q Consensus       142 ~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~  218 (245)
                        +++.++.+||+|||+|+.......  ......||+.|||||.+.+..|+.++|||||||++|||+| |+.||.+.+..
T Consensus       160 --Ll~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~  237 (299)
T 4asz_A          160 --LVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN  237 (299)
T ss_dssp             --EECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             --EECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence              888899999999999974322211  1234568999999999999999999999999999999998 99999999999


Q ss_pred             HHHHHHhcCcc-cCCCCCChhHHhhhcC
Q psy3347         219 EVFDSIVNDEV-RYPRFLSLEAIAIMRR  245 (245)
Q Consensus       219 ~~~~~~~~~~~-~~p~~~~~~~~~li~~  245 (245)
                      ++...+..+.. +.|+.+|+++.+||.+
T Consensus       238 ~~~~~i~~~~~~~~p~~~~~~~~~li~~  265 (299)
T 4asz_A          238 EVIECITQGRVLQRPRTCPQEVYELMLG  265 (299)
T ss_dssp             HHHHHHHHTCCCCCCTTCCHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCccchHHHHHHHHH
Confidence            99999887654 5789999999999863


No 10 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=6.6e-49  Score=328.66  Aligned_cols=214  Identities=24%  Similarity=0.392  Sum_probs=175.7

Q ss_pred             CEeEEEe-----cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCch
Q psy3347           1 VILSQYR-----NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L   75 (245)
                      ||+|+++     .+|+.||||+++..   .....+.+.   +|+++|++++||||++++|+|.+++..|+|||||++|+|
T Consensus        57 Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~---~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L  130 (329)
T 4aoj_A           57 VFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQ---REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL  130 (329)
T ss_dssp             EEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHH---HHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBH
T ss_pred             EEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHH---HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcH
Confidence            7999865     46899999999754   223334454   447888999999999999999999999999999999999


Q ss_pred             hhhhhh----------------cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccc
Q psy3347          76 MMHIHA----------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE  139 (245)
Q Consensus        76 ~~~~~~----------------~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~  139 (245)
                      .++++.                .++++..+..++.|++.||+|||+++|+||   |+||+||                  
T Consensus       131 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHR---DLKp~NI------------------  189 (329)
T 4aoj_A          131 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHR---DLATRNC------------------  189 (329)
T ss_dssp             HHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE------------------
T ss_pred             HHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecc---cccHhhE------------------
Confidence            998853                258899999999999999999999999999   9999999                  


Q ss_pred             hhccccCCCCceEEeecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCC
Q psy3347         140 IKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDD  216 (245)
Q Consensus       140 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~  216 (245)
                          +++.++.+||+|||+++.......  .....+||+.|||||++.+..++.++|||||||++|||+| |+.||.+.+
T Consensus       190 ----Ll~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~  265 (329)
T 4aoj_A          190 ----LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS  265 (329)
T ss_dssp             ----EEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC
T ss_pred             ----EECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC
Confidence                888999999999999985422221  2335678999999999999999999999999999999999 999999999


Q ss_pred             HHHHHHHHhcCc-ccCCCCCChhHHhhhcC
Q psy3347         217 EEEVFDSIVNDE-VRYPRFLSLEAIAIMRR  245 (245)
Q Consensus       217 ~~~~~~~~~~~~-~~~p~~~~~~~~~li~~  245 (245)
                      ..++...+..+. .+.|+.+++++.+||++
T Consensus       266 ~~~~~~~i~~g~~~~~p~~~~~~~~~li~~  295 (329)
T 4aoj_A          266 NTEAIDCITQGRELERPRACPPEVYAIMRG  295 (329)
T ss_dssp             HHHHHHHHHHTCCCCCCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCcccccHHHHHHHHH
Confidence            999988887764 46789999999999863


No 11 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=7e-49  Score=325.66  Aligned_cols=215  Identities=22%  Similarity=0.364  Sum_probs=180.5

Q ss_pred             CEeEEEe-----cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCch
Q psy3347           1 VILSQYR-----NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L   75 (245)
                      ||+|++.     .+++.||||+++...  .....+.+.+|   +.++++++||||++++|+|..++..++|||||++|+|
T Consensus        42 Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E---~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L  116 (308)
T 4gt4_A           42 VYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHE---AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL  116 (308)
T ss_dssp             EEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHH---HHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBH
T ss_pred             EEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHH---HHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcH
Confidence            7999853     468899999997542  22233445444   7778899999999999999999999999999999999


Q ss_pred             hhhhhh-----------------cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCccc
Q psy3347          76 MMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQ  138 (245)
Q Consensus        76 ~~~~~~-----------------~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~  138 (245)
                      .+++..                 ..+++..+.+++.|++.||+|||+++|+||   |+||+||                 
T Consensus       117 ~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHR---DLK~~NI-----------------  176 (308)
T 4gt4_A          117 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHK---DLATRNV-----------------  176 (308)
T ss_dssp             HHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE-----------------
T ss_pred             HHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCC---Cccccce-----------------
Confidence            999842                 248899999999999999999999999999   9999998                 


Q ss_pred             chhccccCCCCceEEeecCCccCCCCC--CCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q psy3347         139 EIKLTVNDTEGYVKIADFGLCKEGMGF--GDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGD  215 (245)
Q Consensus       139 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~  215 (245)
                           +++.++.+||+|||+++.....  .......+||+.|||||.+.+..|+.++|||||||++|||+| |..||.+.
T Consensus       177 -----Ll~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~  251 (308)
T 4gt4_A          177 -----LVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY  251 (308)
T ss_dssp             -----EECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC
T ss_pred             -----EECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC
Confidence                 8889999999999999754222  122445678999999999999999999999999999999998 89999999


Q ss_pred             CHHHHHHHHhcCcc-cCCCCCChhHHhhhcC
Q psy3347         216 DEEEVFDSIVNDEV-RYPRFLSLEAIAIMRR  245 (245)
Q Consensus       216 ~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~  245 (245)
                      +..++...+..+.. +.|+.+|+++.+||.+
T Consensus       252 ~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~  282 (308)
T 4gt4_A          252 SNQDVVEMIRNRQVLPCPDDCPAWVYALMIE  282 (308)
T ss_dssp             CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCCcccchHHHHHHHHH
Confidence            99999998887654 5688999999999863


No 12 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=5.1e-48  Score=345.73  Aligned_cols=218  Identities=31%  Similarity=0.569  Sum_probs=191.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.||+.||+|++.+.............+|.+++.+++.++||||++++++|.+.+.+|+||||+.||+|..++.
T Consensus       205 V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~  284 (689)
T 3v5w_A          205 VYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS  284 (689)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHH
Confidence            89999999999999999987655444555666777788889999999999999999999999999999999999999885


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       .+.+++..++.++.||+.||+|||++||+||   |+||+||                      +++.+|.+||+|||+|
T Consensus       285 ~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHR---DLKPeNI----------------------Lld~~G~vKL~DFGlA  339 (689)
T 3v5w_A          285 QHGVFSEADMRFYAAEIILGLEHMHNRFVVYR---DLKPANI----------------------LLDEHGHVRISDLGLA  339 (689)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHHHHTTTEECC---CCSGGGE----------------------EECTTSCEEECCCTTC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---CCchHHe----------------------EEeCCCCEEeccccee
Confidence             4679999999999999999999999999999   9999999                      8999999999999999


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHhcCcccCCCCC
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGD---DEEEVFDSIVNDEVRYPRFL  235 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~---~~~~~~~~~~~~~~~~p~~~  235 (245)
                      +....  ....+.+||+.|||||++.. ..|+.++|+|||||++|||++|.+||.+.   +..+....+......+|..+
T Consensus       340 ~~~~~--~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~  417 (689)
T 3v5w_A          340 CDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF  417 (689)
T ss_dssp             EECSS--CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTS
T ss_pred             eecCC--CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccC
Confidence            85432  23456799999999999964 57999999999999999999999999753   44566677778888899999


Q ss_pred             ChhHHhhhcC
Q psy3347         236 SLEAIAIMRR  245 (245)
Q Consensus       236 ~~~~~~li~~  245 (245)
                      |+++++||++
T Consensus       418 S~~a~dLI~~  427 (689)
T 3v5w_A          418 SPELRSLLEG  427 (689)
T ss_dssp             CHHHHHHHHH
T ss_pred             CHHHHHHHHH
Confidence            9999999863


No 13 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=2.7e-47  Score=315.31  Aligned_cols=212  Identities=20%  Similarity=0.347  Sum_probs=167.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++   ..||||+++.... ..+..+.+.   ++++++++++||||++++|++.. +..++|||||++|+|.+++.
T Consensus        52 Vy~~~~~---~~vAvK~~~~~~~-~~~~~~~f~---~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~~~l~  123 (307)
T 3omv_A           52 VYKGKWH---GDVAVKILKVVDP-TPEQFQAFR---NEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLH  123 (307)
T ss_dssp             EEEEESS---SEEEEEECCCSSC-CHHHHHHHH---HHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCBHHHHHH
T ss_pred             EEEEEEC---CcEEEEEEEecCC-CHHHHHHHH---HHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCCHHHHHh
Confidence            7999764   3599999975432 233344454   44788899999999999999864 56899999999999999985


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  ..+++..+..++.|++.||+|||+++|+||   |+||+||                      +++.++.+||+|||+
T Consensus       124 ~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHR---DlKp~NI----------------------Ll~~~~~~Ki~DFGl  178 (307)
T 3omv_A          124 VQETKFQMFQLIDIARQTAQGMDYLHAKNIIHR---DMKSNNI----------------------FLHEGLTVKIGDFGL  178 (307)
T ss_dssp             TSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCS---CCCSSSE----------------------EEETTEEEEECCCSS
T ss_pred             hcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCC---ccCHHHE----------------------EECCCCcEEEeeccC
Confidence            3  469999999999999999999999999999   9999998                      888999999999999


Q ss_pred             ccCCCCC--CCCCCcccCCCCccccccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcc----
Q psy3347         159 CKEGMGF--GDRTGTFCGTPEFLAPEVLTE---TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEV----  229 (245)
Q Consensus       159 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~----  229 (245)
                      |+.....  .......+||+.|||||++.+   .+|+.++|||||||++|||+||+.||.+.+.......+.....    
T Consensus       179 a~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~  258 (307)
T 3omv_A          179 ATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD  258 (307)
T ss_dssp             CBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCC
T ss_pred             ceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCC
Confidence            9753221  222445689999999999964   4689999999999999999999999988766555555443322    


Q ss_pred             --cCCCCCChhHHhhhcC
Q psy3347         230 --RYPRFLSLEAIAIMRR  245 (245)
Q Consensus       230 --~~p~~~~~~~~~li~~  245 (245)
                        ..|..+|+++.+||.+
T Consensus       259 ~~~~~~~~~~~l~~li~~  276 (307)
T 3omv_A          259 LSKLYKNCPKAMKRLVAD  276 (307)
T ss_dssp             STTSCTTSCHHHHHHHHH
T ss_pred             cccccccchHHHHHHHHH
Confidence              2356789999998863


No 14 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.9e-46  Score=319.20  Aligned_cols=196  Identities=22%  Similarity=0.373  Sum_probs=164.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee------CCeEEEEEeeccCCc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT------EAHVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~------~~~~~lv~e~~~~~~   74 (245)
                      ||+|+++.||+.||||+++.... .....+.+   .+++++|+.++||||+++++++..      .++.|+|||||+ |+
T Consensus        70 V~~a~~~~t~~~vAiK~i~~~~~-~~~~~~~~---~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~  144 (398)
T 4b99_A           70 VSSARRRLTGQQVAIKKIPNAFD-VVTNAKRT---LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SD  144 (398)
T ss_dssp             EEEEEETTTCCEEEEEEETTTTS-SHHHHHHH---HHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EE
T ss_pred             EEEEEECCCCCEEEEEEECcccc-chHHHHHH---HHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CC
Confidence            89999999999999999976432 22223333   455788889999999999999864      357999999996 57


Q ss_pred             hhhhhh-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEE
Q psy3347          75 LMMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKI  153 (245)
Q Consensus        75 L~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl  153 (245)
                      |.+++. .+.+++..++.+++|++.||+|||++||+||   ||||+||                      +++.+|.+||
T Consensus       145 L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHR---DlKP~NI----------------------l~~~~~~~Ki  199 (398)
T 4b99_A          145 LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHR---DLKPSNL----------------------LVNENCELKI  199 (398)
T ss_dssp             HHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCC---CCCGGGE----------------------EECTTCCEEE
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCC---CcCcccc----------------------ccCCCCCEEE
Confidence            887774 5679999999999999999999999999999   9999999                      8889999999


Q ss_pred             eecCCccCCCCC----CCCCCcccCCCCccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q psy3347         154 ADFGLCKEGMGF----GDRTGTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN  226 (245)
Q Consensus       154 ~Dfg~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~  226 (245)
                      +|||+++.....    .......+||+.|+|||++.+. .++.++||||+||++|||++|++||.+.+..+.+..|..
T Consensus       200 ~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~  277 (398)
T 4b99_A          200 GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM  277 (398)
T ss_dssp             CCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHH
T ss_pred             eecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            999999854322    2234567899999999999875 468999999999999999999999999998888887754


No 15 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=6.7e-46  Score=312.94  Aligned_cols=214  Identities=27%  Similarity=0.457  Sum_probs=173.4

Q ss_pred             CEeEEEecC-----CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCC-CceeeeeEEEeeC-CeEEEEEeeccCC
Q psy3347           1 VILSQYRNT-----GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRH-PFLVNLFACFQTE-AHVCFVMEYAAGG   73 (245)
Q Consensus         1 V~~a~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h-~ni~~~~~~~~~~-~~~~lv~e~~~~~   73 (245)
                      ||+|++..+     ++.||||+++...  .....+.+.+|   +++|++++| |||++++|+|... +.+++|||||++|
T Consensus        80 Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E---~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G  154 (353)
T 4ase_A           80 VIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSE---LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG  154 (353)
T ss_dssp             EEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHH---HHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTE
T ss_pred             EEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHH---HHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCC
Confidence            799988754     4689999997643  22334445555   666777765 8999999998764 5789999999999


Q ss_pred             chhhhhhh-----------------cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCc
Q psy3347          74 DLMMHIHA-----------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNS  136 (245)
Q Consensus        74 ~L~~~~~~-----------------~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~  136 (245)
                      +|.++++.                 ..+++..+..++.|++.||+|||+++|+||   |+||+||               
T Consensus       155 ~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHR---DLK~~NI---------------  216 (353)
T 4ase_A          155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR---DLAARNI---------------  216 (353)
T ss_dssp             EHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE---------------
T ss_pred             CHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecC---ccCccce---------------
Confidence            99999853                 237889999999999999999999999999   9999998               


Q ss_pred             ccchhccccCCCCceEEeecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q psy3347         137 SQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFP  213 (245)
Q Consensus       137 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~  213 (245)
                             +++.++.+||+|||+|+.......  .....+||+.|||||.+.+..|+.++|||||||++|||+| |+.||.
T Consensus       217 -------Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~  289 (353)
T 4ase_A          217 -------LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP  289 (353)
T ss_dssp             -------EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred             -------eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence                   888899999999999986433322  2345678999999999999999999999999999999998 999998


Q ss_pred             CCCHH-HHHHHHhcC-cccCCCCCChhHHhhhc
Q psy3347         214 GDDEE-EVFDSIVND-EVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       214 ~~~~~-~~~~~~~~~-~~~~p~~~~~~~~~li~  244 (245)
                      +.... .+...+..+ ..+.|+.+++++.+||.
T Consensus       290 ~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~  322 (353)
T 4ase_A          290 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML  322 (353)
T ss_dssp             TCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHH
Confidence            86544 444445444 34578999999999986


No 16 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=3.4e-45  Score=326.99  Aligned_cols=213  Identities=28%  Similarity=0.446  Sum_probs=183.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++....   ....+.+.   +++++|+.++||||++++++|.+++.+|+|||||+||+|.+++.
T Consensus       173 V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~---~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~  246 (573)
T 3uto_A          173 VHRVTERATGNNFAAKFVMTPH---ESDKETVR---KEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA  246 (573)
T ss_dssp             EEEEEETTTCCEEEEEEEECCS---HHHHHHHH---HHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHT
T ss_pred             EEEEEECCCCCEEEEEEEeccc---hhhHHHHH---HHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHH
Confidence            7999999999999999998643   22233444   44777888999999999999999999999999999999999884


Q ss_pred             --hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC--CCceEEeec
Q psy3347          81 --ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT--EGYVKIADF  156 (245)
Q Consensus        81 --~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~kl~Df  156 (245)
                        .+.+++..++.+++||+.||+|||++||+||   |+||+||                      +++.  .+.+||+||
T Consensus       247 ~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHR---DlKp~Ni----------------------ll~~~~~~~vKl~DF  301 (573)
T 3uto_A          247 DEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHL---DLKPENI----------------------MFTTKRSNELKLIDF  301 (573)
T ss_dssp             CTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EESSSSCCCEEECCC
T ss_pred             HhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec---cCChhhc----------------------cccCCCCCCEEEeec
Confidence              3579999999999999999999999999999   8999888                      5543  488999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC----
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP----  232 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p----  232 (245)
                      |+++... ........+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+..+....+......+|    
T Consensus       302 G~a~~~~-~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  380 (573)
T 3uto_A          302 GLTAHLD-PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF  380 (573)
T ss_dssp             SSCEECC-TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGG
T ss_pred             cceeEcc-CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccc
Confidence            9998642 22334466899999999999999999999999999999999999999999999999999988766554    


Q ss_pred             CCCChhHHhhhcC
Q psy3347         233 RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ~~~~~~~~~li~~  245 (245)
                      ..+|+++++||++
T Consensus       381 ~~~s~~~~dli~~  393 (573)
T 3uto_A          381 SGISEDGKDFIRK  393 (573)
T ss_dssp             TTSCHHHHHHHHT
T ss_pred             cCCCHHHHHHHHH
Confidence            5789999999864


No 17 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=2.2e-45  Score=303.73  Aligned_cols=211  Identities=19%  Similarity=0.308  Sum_probs=156.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC------------eEEEEEe
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA------------HVCFVME   68 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~------------~~~lv~e   68 (245)
                      ||+|+++.+|+.||||+++...  .....+.+.   +|+++++.++||||++++++|...+            +.|+|||
T Consensus        21 V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~---~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE   95 (299)
T 4g31_A           21 VFEAKNKVDDCNYAIKRIRLPN--RELAREKVM---REVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQ   95 (299)
T ss_dssp             EEEEEETTTCCEEEEEEEEECS--SHHHHHHHH---HHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEE
T ss_pred             EEEEEECCCCCEEEEEEEeccC--CHHHHHHHH---HHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEe
Confidence            8999999999999999997543  222233444   4578889999999999999986543            4799999


Q ss_pred             eccCCchhhhhhhc-C---CChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccc
Q psy3347          69 YAAGGDLMMHIHAD-V---FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTV  144 (245)
Q Consensus        69 ~~~~~~L~~~~~~~-~---l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~  144 (245)
                      ||++|+|.++++.. .   .++..++.++.|++.||+|||++||+||   |+||+||                      +
T Consensus        96 ~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHR---DlKp~NI----------------------L  150 (299)
T 4g31_A           96 LCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHR---DLKPSNI----------------------F  150 (299)
T ss_dssp             CCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------E
T ss_pred             cCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccc---cCcHHHe----------------------E
Confidence            99999999999643 2   3445688999999999999999999999   9999999                      8


Q ss_pred             cCCCCceEEeecCCccCCCCCCC------------CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCC
Q psy3347         145 NDTEGYVKIADFGLCKEGMGFGD------------RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF  212 (245)
Q Consensus       145 ~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf  212 (245)
                      ++.+|.+||+|||+|+.......            .....+||+.|||||++.+..|+.++|||||||++|||++   ||
T Consensus       151 l~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf  227 (299)
T 4g31_A          151 FTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PF  227 (299)
T ss_dssp             ECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CC
T ss_pred             ECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CC
Confidence            88999999999999975432211            1234579999999999999999999999999999999996   77


Q ss_pred             CCCCH-HHHHHHHhcCccc-CCCCCChhHHhhhc
Q psy3347         213 PGDDE-EEVFDSIVNDEVR-YPRFLSLEAIAIMR  244 (245)
Q Consensus       213 ~~~~~-~~~~~~~~~~~~~-~p~~~~~~~~~li~  244 (245)
                      .+... ......+.....+ .+...+++..+||+
T Consensus       228 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~  261 (299)
T 4g31_A          228 STQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQ  261 (299)
T ss_dssp             SSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHH
T ss_pred             CCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHH
Confidence            64322 2233333333221 12345566666664


No 18 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.4e-43  Score=298.15  Aligned_cols=217  Identities=50%  Similarity=0.928  Sum_probs=190.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++++.........+.+.+|   ..+++.++||||+++++++...+..|+||||+++|+|..++.
T Consensus        21 V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E---~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~   97 (337)
T 1o6l_A           21 VILVREKATGRYYAMKILRKEVIIAKDEVAHTVTE---SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS   97 (337)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHH---HHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHH---HHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHH
Confidence            79999999999999999986543333334444444   666778899999999999999999999999999999998885


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       ...+++..++.++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||++
T Consensus        98 ~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr---Dlkp~NI----------------------ll~~~g~vkL~DFG~a  152 (337)
T 1o6l_A           98 RERVFTEERARFYGAEIVSALEYLHSRDVVYR---DIKLENL----------------------MLDKDGHIKITDFGLC  152 (337)
T ss_dssp             HHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCC---CCCGGGE----------------------EECTTSCEEECCCTTC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC---cCCHHHE----------------------EECCCCCEEEeeccch
Confidence             4578999999999999999999999999999   9999999                      8889999999999999


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChhH
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA  239 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (245)
                      +............+||+.|+|||.+.+..++.++|+|||||++|||++|+.||.+.+..+....+......+|..+++++
T Consensus       153 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~  232 (337)
T 1o6l_A          153 KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA  232 (337)
T ss_dssp             BCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred             hhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHH
Confidence            86444444456678999999999999888999999999999999999999999999888888889888888999999999


Q ss_pred             HhhhcC
Q psy3347         240 IAIMRR  245 (245)
Q Consensus       240 ~~li~~  245 (245)
                      ++||++
T Consensus       233 ~~li~~  238 (337)
T 1o6l_A          233 KSLLAG  238 (337)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999863


No 19 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=8.3e-44  Score=301.27  Aligned_cols=217  Identities=48%  Similarity=0.950  Sum_probs=184.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|+++.+|+.||+|++++.........+...+|.+   +++.+ +||||+++++++...+..|+||||+++|+|..++
T Consensus        39 V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~---il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l  115 (353)
T 3txo_A           39 VMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKR---ILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI  115 (353)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHH---HHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHH
T ss_pred             EEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHH---HHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHH
Confidence            7999999999999999998754434444455555544   44444 6999999999999999999999999999999888


Q ss_pred             h-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          80 H-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        80 ~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      . ...+++..++.++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||+
T Consensus       116 ~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHr---Dlkp~NI----------------------Ll~~~g~ikL~DFG~  170 (353)
T 3txo_A          116 QKSRRFDEARARFYAAEIISALMFLHDKGIIYR---DLKLDNV----------------------LLDHEGHCKLADFGM  170 (353)
T ss_dssp             HHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC---CCCGGGE----------------------EECTTSCEEECCCTT
T ss_pred             HHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccc---CCCHHHE----------------------EECCCCCEEEccccc
Confidence            5 4679999999999999999999999999999   9999999                      888999999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChh
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE  238 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (245)
                      ++............+||+.|+|||.+.+..++.++|+|||||++|||++|+.||.+.+..+....+......+|..++++
T Consensus       171 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~  250 (353)
T 3txo_A          171 CKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHED  250 (353)
T ss_dssp             CBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHH
T ss_pred             eeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHH
Confidence            98644444445667899999999999888899999999999999999999999999999999999999998999999999


Q ss_pred             HHhhhcC
Q psy3347         239 AIAIMRR  245 (245)
Q Consensus       239 ~~~li~~  245 (245)
                      +++||++
T Consensus       251 ~~~li~~  257 (353)
T 3txo_A          251 ATGILKS  257 (353)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863


No 20 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1.6e-43  Score=299.84  Aligned_cols=189  Identities=24%  Similarity=0.397  Sum_probs=151.9

Q ss_pred             CEeEEEe---cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchh
Q psy3347           1 VILSQYR---NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|+++   .+++.||+|++....     ....+.+|   +++++.+ +||||++++++|.+.+++|+||||+++++|.
T Consensus        37 Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E---~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~  108 (361)
T 4f9c_A           37 VYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAE---LQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFL  108 (361)
T ss_dssp             EEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHH---HHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHH
T ss_pred             EEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHH---HHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHH
Confidence            7999886   368899999987542     12233344   5666666 6999999999999999999999999999999


Q ss_pred             hhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCC-CceEEee
Q psy3347          77 MHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTE-GYVKIAD  155 (245)
Q Consensus        77 ~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~kl~D  155 (245)
                      ++++  .+++..++.+++|++.||+|||++||+||   ||||+||                      +++.+ +.+||+|
T Consensus       109 ~~~~--~l~~~~~~~~~~qll~al~ylH~~gIiHR---DiKPeNi----------------------Ll~~~~~~~kl~D  161 (361)
T 4f9c_A          109 DILN--SLSFQEVREYMLNLFKALKRIHQFGIVHR---DVKPSNF----------------------LYNRRLKKYALVD  161 (361)
T ss_dssp             HHHT--TCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EEETTTTEEEECC
T ss_pred             HHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeEeC---cCCHHHe----------------------EEeCCCCeEEECc
Confidence            9884  59999999999999999999999999999   9999998                      66655 7999999


Q ss_pred             cCCccCCCCCC----------------------------CCCCcccCCCCccccccccCCC-CCcchhHHHHHHHHHHHH
Q psy3347         156 FGLCKEGMGFG----------------------------DRTGTFCGTPEFLAPEVLTETS-YTRAVDWWGLGVLIFEML  206 (245)
Q Consensus       156 fg~~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~  206 (245)
                      ||+|+......                            ......+||+.|+|||++.+.+ ++.++||||+||++|||+
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell  241 (361)
T 4f9c_A          162 FGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL  241 (361)
T ss_dssp             CTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred             CCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHH
Confidence            99997432211                            1123457999999999998764 889999999999999999


Q ss_pred             hCCCCCC-CCCHHHHHHHH
Q psy3347         207 VGESPFP-GDDEEEVFDSI  224 (245)
Q Consensus       207 ~g~~pf~-~~~~~~~~~~~  224 (245)
                      +|+.||. +.+..+.+..+
T Consensus       242 ~G~~Pf~~~~~~~~~l~~I  260 (361)
T 4f9c_A          242 SGRYPFYKASDDLTALAQI  260 (361)
T ss_dssp             HTCSSSSCCSSHHHHHHHH
T ss_pred             HCCCCCCCCCCHHHHHHHH
Confidence            9999984 44555554444


No 21 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=5.4e-43  Score=295.38  Aligned_cols=217  Identities=49%  Similarity=0.935  Sum_probs=188.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|+++.+|+.||+|++++.........+....|.++   +..+ +||||+++++++.+.+..|+||||+++|+|..++
T Consensus        33 V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~i---l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l  109 (345)
T 1xjd_A           33 VFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV---LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI  109 (345)
T ss_dssp             EEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHH---HHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHH---HHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHH
Confidence            79999999999999999987543333344555555444   4333 8999999999999999999999999999999988


Q ss_pred             hh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          80 HA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        80 ~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .. +.+++..+..++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||+
T Consensus       110 ~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr---Dlkp~NI----------------------ll~~~g~vkL~DFG~  164 (345)
T 1xjd_A          110 QSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR---DLKLDNI----------------------LLDKDGHIKIADFGM  164 (345)
T ss_dssp             HHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC---CCCGGGE----------------------EECTTSCEEECCCTT
T ss_pred             HHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC---CCChhhE----------------------EECCCCCEEEeEChh
Confidence            54 679999999999999999999999999999   9999999                      888999999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChh
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE  238 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (245)
                      ++............+||+.|+|||.+.+..++.++|+|||||++|+|++|+.||.+.+..+....+......+|..++++
T Consensus       165 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~  244 (345)
T 1xjd_A          165 CKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKE  244 (345)
T ss_dssp             CBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHH
T ss_pred             hhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccCHH
Confidence            97543333445567899999999999998899999999999999999999999999999999999988888899999999


Q ss_pred             HHhhhcC
Q psy3347         239 AIAIMRR  245 (245)
Q Consensus       239 ~~~li~~  245 (245)
                      +++||++
T Consensus       245 ~~~li~~  251 (345)
T 1xjd_A          245 AKDLLVK  251 (345)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863


No 22 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=7.8e-43  Score=295.26  Aligned_cols=217  Identities=48%  Similarity=0.899  Sum_probs=189.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|+++.+|+.||+|++++.........+.+.+|   ..++..+ +||||+++++++...+..|+||||+++|+|..++
T Consensus        36 V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E---~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l  112 (353)
T 2i0e_A           36 VMLSERKGTDELYAVKILKKDVVIQDDDVECTMVE---KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI  112 (353)
T ss_dssp             EEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHH---HHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHH---HHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHH
Confidence            79999999999999999987543333344445545   4455555 7999999999999999999999999999999988


Q ss_pred             hh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          80 HA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        80 ~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .. +.+++..++.++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||+
T Consensus       113 ~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHr---Dlkp~NI----------------------ll~~~g~vkL~DFG~  167 (353)
T 2i0e_A          113 QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR---DLKLDNV----------------------MLDSEGHIKIADFGM  167 (353)
T ss_dssp             HHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC---CCCGGGE----------------------EECTTSCEEECCCTT
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEec---cCCHHHE----------------------EEcCCCcEEEEeCCc
Confidence            54 679999999999999999999999999999   9999999                      888999999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChh
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE  238 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (245)
                      ++............+||+.|+|||.+.+..++.++|+|||||++|||++|+.||.+.+..+....+......+|..++++
T Consensus       168 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~  247 (353)
T 2i0e_A          168 CKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKE  247 (353)
T ss_dssp             CBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHH
T ss_pred             ccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHH
Confidence            98644444445567899999999999988999999999999999999999999999999999999999888899999999


Q ss_pred             HHhhhcC
Q psy3347         239 AIAIMRR  245 (245)
Q Consensus       239 ~~~li~~  245 (245)
                      +++||++
T Consensus       248 ~~~li~~  254 (353)
T 2i0e_A          248 AVAICKG  254 (353)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863


No 23 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=1.2e-42  Score=291.40  Aligned_cols=215  Identities=30%  Similarity=0.584  Sum_probs=187.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|++..... .....+.+.   +++++++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        31 V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~---~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~  106 (328)
T 3fe3_A           31 VKLARHILTGREVAIKIIDKTQL-NPTSLQKLF---REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV  106 (328)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHH---HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHH---HHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHH
Confidence            79999999999999999986532 223333444   45777888999999999999999999999999999999999884


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       .+.+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+|||++
T Consensus       107 ~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHr---Dlkp~NI----------------------ll~~~~~~kl~DFG~a  161 (328)
T 3fe3_A          107 AHGRMKEKEARSKFRQIVSAVQYCHQKRIVHR---DLKAENL----------------------LLDADMNIKIADFGFS  161 (328)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EECTTSCEEECSTTCC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecc---CCCHHHE----------------------EEcCCCCEEEeeccCc
Confidence             5679999999999999999999999999999   9999999                      8889999999999998


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChh
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSYT-RAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE  238 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (245)
                      ..... .......+||+.|+|||.+.+..++ .++|||||||++|+|++|+.||.+.+..+....+..+...+|..++++
T Consensus       162 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~  240 (328)
T 3fe3_A          162 NEFTV-GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD  240 (328)
T ss_dssp             GGGSS-SCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHH
T ss_pred             eecCC-CCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHH
Confidence            75322 2334566899999999999887765 789999999999999999999999999999999999988999999999


Q ss_pred             HHhhhcC
Q psy3347         239 AIAIMRR  245 (245)
Q Consensus       239 ~~~li~~  245 (245)
                      +.+||++
T Consensus       241 ~~~li~~  247 (328)
T 3fe3_A          241 CENLLKR  247 (328)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863


No 24 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=2e-43  Score=292.87  Aligned_cols=178  Identities=22%  Similarity=0.321  Sum_probs=145.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC----eEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA----HVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~----~~~lv~e~~~~~~L~   76 (245)
                      ||+|++  +|+.||||+++...      .+.+.+| +++..+..++||||+++++++..++    ..|+|||||++|+|.
T Consensus        19 Vy~~~~--~g~~VAvK~l~~~~------~~~~~~e-~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~   89 (303)
T 3hmm_A           19 VWRGKW--RGEEVAVKIFSSRE------ERSWFRE-AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLF   89 (303)
T ss_dssp             EEEEEE--TTEEEEEEEECGGG------HHHHHHH-HHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHH
T ss_pred             EEEEEE--CCEEEEEEEECccc------hhhHHHH-HHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHH
Confidence            799987  59999999997531      1222333 3455567889999999999997654    689999999999999


Q ss_pred             hhhhhcCCChHHHHHHHHHHHHHHHHhhhc--------CccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCC
Q psy3347          77 MHIHADVFSEPRAVFYAACVVLGLQYLHES--------RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTE  148 (245)
Q Consensus        77 ~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (245)
                      ++++..++++..+.+++.|++.||+|||++        +|+||   |+||+||                      +++.+
T Consensus        90 ~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHR---DlKp~NI----------------------Ll~~~  144 (303)
T 3hmm_A           90 DYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR---DLKSKNI----------------------LVKKN  144 (303)
T ss_dssp             HHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECS---CCCGGGE----------------------EECTT
T ss_pred             HHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeec---cCCcccE----------------------EECCC
Confidence            999988999999999999999999999987        99999   9999999                      89999


Q ss_pred             CceEEeecCCccCCCCCCC----CCCcccCCCCccccccccCC------CCCcchhHHHHHHHHHHHHhCCCCC
Q psy3347         149 GYVKIADFGLCKEGMGFGD----RTGTFCGTPEFLAPEVLTET------SYTRAVDWWGLGVLIFEMLVGESPF  212 (245)
Q Consensus       149 ~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~~l~el~~g~~pf  212 (245)
                      +.+||+|||+++.......    .....+||+.|||||++.+.      .++.++|||||||++|||+||.+||
T Consensus       145 ~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~  218 (303)
T 3hmm_A          145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             SCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred             CCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCC
Confidence            9999999999875322221    12345799999999999754      3667999999999999999997765


No 25 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-42  Score=290.58  Aligned_cols=214  Identities=37%  Similarity=0.760  Sum_probs=187.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++++.........+.+.+   +..+++.++||||+++++++.+.+..++||||+++++|.+++.
T Consensus        22 V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~---E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~   98 (318)
T 1fot_A           22 VHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND---ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR   98 (318)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHH---HHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHH---HHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHH
Confidence            7999999999999999998653322233344444   4666778899999999999999999999999999999999985


Q ss_pred             h-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 A-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 ~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                      . ..+++..+..++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||++
T Consensus        99 ~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr---Dlkp~NI----------------------ll~~~g~~kL~Dfg~a  153 (318)
T 1fot_A           99 KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYR---DLKPENI----------------------LLDKNGHIKITDFGFA  153 (318)
T ss_dssp             HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECC---CCCGGGE----------------------EECTTSCEEECCCSSC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---CCChheE----------------------EEcCCCCEEEeecCcc
Confidence            4 578999999999999999999999999999   9999999                      8889999999999999


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChhH
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA  239 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (245)
                      +...   ......+||+.|+|||.+.+..++.++|+|||||++|+|++|+.||.+.+..+....+......+|..+++++
T Consensus       154 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~  230 (318)
T 1fot_A          154 KYVP---DVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDV  230 (318)
T ss_dssp             EECS---SCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred             eecC---CccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHH
Confidence            7532   2234568899999999999888999999999999999999999999999988999999988888999999999


Q ss_pred             HhhhcC
Q psy3347         240 IAIMRR  245 (245)
Q Consensus       240 ~~li~~  245 (245)
                      ++||++
T Consensus       231 ~~li~~  236 (318)
T 1fot_A          231 KDLLSR  236 (318)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999863


No 26 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=3.1e-42  Score=290.79  Aligned_cols=217  Identities=43%  Similarity=0.853  Sum_probs=184.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|+++.+|+.||+|++++.........+.+.+|   ..++..+ +||||+++++++...+..|+||||+++++|..++
T Consensus        25 V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E---~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l  101 (345)
T 3a8x_A           25 VLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTE---KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM  101 (345)
T ss_dssp             EEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHH---HHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHH---HHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHH
Confidence            79999999999999999987654444445555555   4445555 7999999999999999999999999999999888


Q ss_pred             h-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          80 H-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        80 ~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      . ...+++..++.++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||+
T Consensus       102 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHr---Dlkp~NI----------------------ll~~~g~~kL~DFG~  156 (345)
T 3a8x_A          102 QRQRKLPEEHARFYSAEISLALNYLHERGIIYR---DLKLDNV----------------------LLDSEGHIKLTDYGM  156 (345)
T ss_dssp             HHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC---CCCGGGE----------------------EECTTSCEEECCGGG
T ss_pred             HHcCCCCHHHHHHHHHHHHHHHHHHHHCCceec---CCCHHHE----------------------EECCCCCEEEEeccc
Confidence            5 4679999999999999999999999999999   9999999                      888999999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC---------CCHHHHHHHHhcCcc
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPG---------DDEEEVFDSIVNDEV  229 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~---------~~~~~~~~~~~~~~~  229 (245)
                      ++............+||+.|+|||.+.+..++.++|+|||||++|||++|+.||..         .......+.+.....
T Consensus       157 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~  236 (345)
T 3a8x_A          157 CKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI  236 (345)
T ss_dssp             CBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC
T ss_pred             cccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC
Confidence            97544444445667899999999999988899999999999999999999999965         234455666777778


Q ss_pred             cCCCCCChhHHhhhcC
Q psy3347         230 RYPRFLSLEAIAIMRR  245 (245)
Q Consensus       230 ~~p~~~~~~~~~li~~  245 (245)
                      .+|..+++++++||++
T Consensus       237 ~~p~~~s~~~~~li~~  252 (345)
T 3a8x_A          237 RIPRSLSVKAASVLKS  252 (345)
T ss_dssp             CCCTTSCHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHH
Confidence            8899999999999863


No 27 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=2.6e-42  Score=295.89  Aligned_cols=217  Identities=42%  Similarity=0.854  Sum_probs=183.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|+++.+|+.||+|++++.........+.+.+|.++   +..+ +||||++++++|...+..++||||+++|+|..++
T Consensus        68 V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~i---l~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l  144 (396)
T 4dc2_A           68 VLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHV---FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM  144 (396)
T ss_dssp             EEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHH---HHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHH---HHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHH
Confidence            79999999999999999987654444444555555444   4333 7999999999999999999999999999999888


Q ss_pred             h-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          80 H-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        80 ~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      . ...+++..++.++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||+
T Consensus       145 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHr---DLKp~NI----------------------Ll~~~g~ikL~DFGl  199 (396)
T 4dc2_A          145 QRQRKLPEEHARFYSAEISLALNYLHERGIIYR---DLKLDNV----------------------LLDSEGHIKLTDYGM  199 (396)
T ss_dssp             HHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC---CCCGGGE----------------------EECTTSCEEECCCTT
T ss_pred             HHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEec---cCCHHHE----------------------EECCCCCEEEeecce
Confidence            5 4679999999999999999999999999999   9999999                      889999999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC---------CHHHHHHHHhcCcc
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD---------DEEEVFDSIVNDEV  229 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~---------~~~~~~~~~~~~~~  229 (245)
                      ++............+||+.|+|||.+.+..++.++|+|||||++|||++|+.||.+.         ......+.+.....
T Consensus       200 a~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~  279 (396)
T 4dc2_A          200 CKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI  279 (396)
T ss_dssp             CBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC
T ss_pred             eeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc
Confidence            986444445566778999999999999999999999999999999999999999532         23446666777888


Q ss_pred             cCCCCCChhHHhhhcC
Q psy3347         230 RYPRFLSLEAIAIMRR  245 (245)
Q Consensus       230 ~~p~~~~~~~~~li~~  245 (245)
                      .+|..+++++++||++
T Consensus       280 ~~p~~~s~~~~~li~~  295 (396)
T 4dc2_A          280 RIPRSLSVKAASVLKS  295 (396)
T ss_dssp             CCCTTSCHHHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHH
Confidence            8999999999999863


No 28 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=1.3e-42  Score=295.89  Aligned_cols=218  Identities=39%  Similarity=0.799  Sum_probs=184.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+++.||+|++++...........+.+|..+  +++.++||||++++++|...+..|+||||+++|+|..++.
T Consensus        54 V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~--ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~  131 (373)
T 2r5t_A           54 VLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV--LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQ  131 (373)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGBC-------------C--CBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH
T ss_pred             EEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHH--HHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHH
Confidence            79999999999999999987654433333444444221  2567899999999999999999999999999999998885


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       ...+++..++.++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||++
T Consensus       132 ~~~~~~~~~~~~~~~qi~~aL~~LH~~givHr---Dlkp~NI----------------------ll~~~g~ikL~DFG~a  186 (373)
T 2r5t_A          132 RERCFLEPRARFYAAEIASALGYLHSLNIVYR---DLKPENI----------------------LLDSQGHIVLTDFGLC  186 (373)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EECTTSCEEECCCCBC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCceec---CCCHHHE----------------------EECCCCCEEEeeCccc
Confidence             4578999999999999999999999999999   9999999                      8889999999999999


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChhH
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA  239 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (245)
                      +............+||+.|+|||.+.+..++.++|+|||||++|||++|..||.+.+..+....+......+|..+++++
T Consensus       187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  266 (373)
T 2r5t_A          187 KENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSA  266 (373)
T ss_dssp             GGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSSSCHHH
T ss_pred             cccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Confidence            75444444456778999999999999989999999999999999999999999999999999999988888899999999


Q ss_pred             HhhhcC
Q psy3347         240 IAIMRR  245 (245)
Q Consensus       240 ~~li~~  245 (245)
                      ++||++
T Consensus       267 ~~li~~  272 (373)
T 2r5t_A          267 RHLLEG  272 (373)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999863


No 29 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=2.2e-42  Score=292.24  Aligned_cols=214  Identities=40%  Similarity=0.787  Sum_probs=187.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++...........+.+.   +++.+++.++||||+++++++.+.+..|+||||+++++|.+++.
T Consensus        57 V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~---~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~  133 (350)
T 1rdq_E           57 VMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL---NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR  133 (350)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHH---HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEhHHhccHHHHHHHH---HHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHH
Confidence            799999999999999999865433333334444   44677888999999999999999999999999999999999885


Q ss_pred             h-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 A-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 ~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                      . +.+++..+..++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||++
T Consensus       134 ~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr---Dlkp~NI----------------------ll~~~g~~kL~DFg~a  188 (350)
T 1rdq_E          134 RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR---DLKPENL----------------------LIDQQGYIQVTDFGFA  188 (350)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTSCEEECCCTTC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---cCccceE----------------------EECCCCCEEEcccccc
Confidence            4 679999999999999999999999999999   9999999                      8889999999999999


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChhH
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA  239 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (245)
                      +....   .....+||+.|+|||.+.+..++.++|+|||||++|+|++|+.||.+.+..+....+..+...+|..+++++
T Consensus       189 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~  265 (350)
T 1rdq_E          189 KRVKG---RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL  265 (350)
T ss_dssp             EECSS---CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHH
T ss_pred             eeccC---CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHH
Confidence            75322   234567899999999999888999999999999999999999999999999999999998888999999999


Q ss_pred             HhhhcC
Q psy3347         240 IAIMRR  245 (245)
Q Consensus       240 ~~li~~  245 (245)
                      ++||++
T Consensus       266 ~~li~~  271 (350)
T 1rdq_E          266 KDLLRN  271 (350)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999863


No 30 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=5.4e-42  Score=289.43  Aligned_cols=215  Identities=27%  Similarity=0.507  Sum_probs=178.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||||++......  ...+.+.   ++++.++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        26 V~~a~~~~~~~~vAiK~~~~~~~~--~~~~~~~---~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~  100 (347)
T 3zgw_A           26 VKLACHILTGEMVAIKIMDKNTLG--SDLPRIK---TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYII  100 (347)
T ss_dssp             EEEEEETTTCCEEEEEEEESSCC-----CCHHH---HHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEccccc--hHHHHHH---HHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCCHHHHHH
Confidence            799999999999999999865422  2233444   44777889999999999999999999999999999999998884


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       .+.+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+|||++
T Consensus       101 ~~~~l~~~~~~~i~~qi~~aL~~LH~~givHr---Dlkp~NI----------------------ll~~~~~~kL~DFG~a  155 (347)
T 3zgw_A          101 SQDRLSEEETRVVFRQIVSAVAYVHSQGYAHR---DLKPENL----------------------LFDEYHKLKLIDFGLC  155 (347)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC---CCCGGGE----------------------EECTTSCEEECCCTTC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC---CccHHHE----------------------EEcCCCCEEEEeccCc
Confidence             5679999999999999999999999999999   9999999                      8888999999999998


Q ss_pred             cCCCCCC-CCCCcccCCCCccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCCh
Q psy3347         160 KEGMGFG-DRTGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSL  237 (245)
Q Consensus       160 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~  237 (245)
                      ....... ......+||+.|+|||.+.+..+ +.++|||||||++|+|++|..||.+.+..+....+..+...+|..+++
T Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~  235 (347)
T 3zgw_A          156 AKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSP  235 (347)
T ss_dssp             BC--------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCH
T ss_pred             ccccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCH
Confidence            7533222 22445678999999999988775 889999999999999999999999999999999999999899999999


Q ss_pred             hHHhhhcC
Q psy3347         238 EAIAIMRR  245 (245)
Q Consensus       238 ~~~~li~~  245 (245)
                      ++.+||++
T Consensus       236 ~~~~li~~  243 (347)
T 3zgw_A          236 SSILLLQQ  243 (347)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998863


No 31 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=1.3e-41  Score=281.23  Aligned_cols=214  Identities=27%  Similarity=0.462  Sum_probs=182.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|++......   ..+.+.   +++..++.++||||+++++++..++..++||||+++++|.+++.
T Consensus        36 V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~---~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  109 (297)
T 3fxz_A           36 VYTAMDVATGQEVAIRQMNLQQQP---KKELII---NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT  109 (297)
T ss_dssp             EEEEEBTTTCCEEEEEEEEGGGCS---CHHHHH---HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHH
T ss_pred             EEEEEECCCCcEEEEEEeeccccc---HHHHHH---HHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHh
Confidence            799999999999999999764322   223333   34677888999999999999999999999999999999999998


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCcc
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK  160 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~  160 (245)
                      ...+++..+..++.|++.||+|||++|++||   |++|+||                      +++.++.+||+|||++.
T Consensus       110 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---Dlkp~Ni----------------------l~~~~~~~kl~Dfg~~~  164 (297)
T 3fxz_A          110 ETCMDEGQIAAVCRECLQALEFLHSNQVIHR---DIKSDNI----------------------LLGMDGSVKLTDFGFCA  164 (297)
T ss_dssp             HSCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTCCEEECCCTTCE
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCCceeC---CCCHHHE----------------------EECCCCCEEEeeCCCce
Confidence            8889999999999999999999999999999   9999998                      88889999999999987


Q ss_pred             CCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcc---cCCCCCCh
Q psy3347         161 EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEV---RYPRFLSL  237 (245)
Q Consensus       161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~---~~p~~~~~  237 (245)
                      .............|++.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+.......+.....   ..|..+++
T Consensus       165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (297)
T 3fxz_A          165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSA  244 (297)
T ss_dssp             ECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCH
T ss_pred             ecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCH
Confidence            654444445566899999999999999999999999999999999999999998887766666544322   34677888


Q ss_pred             hHHhhhcC
Q psy3347         238 EAIAIMRR  245 (245)
Q Consensus       238 ~~~~li~~  245 (245)
                      ++++||++
T Consensus       245 ~~~~li~~  252 (297)
T 3fxz_A          245 IFRDFLNR  252 (297)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            89888863


No 32 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=4.7e-42  Score=299.01  Aligned_cols=217  Identities=49%  Similarity=0.903  Sum_probs=182.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|+++............+   .+++.+++.++||||+++++++...+..++||||+++++|..++.
T Consensus       164 V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~---~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~  240 (446)
T 4ejn_A          164 VILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS  240 (446)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHC----------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHH
T ss_pred             EEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHH---HHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHH
Confidence            79999999999999999986533333333333   344677888999999999999999999999999999999988885


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHE-SRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~-~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                       ...+++..+..++.|++.||+|||+ +||+||   |+||+||                      +++.++.+||+|||+
T Consensus       241 ~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHr---Dlkp~NI----------------------ll~~~~~~kl~DFG~  295 (446)
T 4ejn_A          241 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYR---DLKLENL----------------------MLDKDGHIKITDFGL  295 (446)
T ss_dssp             HHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCC---CCCGGGE----------------------EECSSSCEEECCCCC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEEC---CCCHHHE----------------------EECCCCCEEEccCCC
Confidence             4678999999999999999999998 999999   9999999                      888899999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChh
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE  238 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (245)
                      ++............+||+.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+..+....+......+|..++++
T Consensus       296 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~  375 (446)
T 4ejn_A          296 CKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE  375 (446)
T ss_dssp             CCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHH
T ss_pred             ceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHH
Confidence            97644444445567899999999999999999999999999999999999999999999999999988888899999999


Q ss_pred             HHhhhcC
Q psy3347         239 AIAIMRR  245 (245)
Q Consensus       239 ~~~li~~  245 (245)
                      +++||++
T Consensus       376 ~~~li~~  382 (446)
T 4ejn_A          376 AKSLLSG  382 (446)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863


No 33 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=3.1e-42  Score=296.72  Aligned_cols=217  Identities=35%  Similarity=0.617  Sum_probs=183.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++++.........+.+.+|   ..+++.++||||++++++|.+.+..|+||||+++|+|.++++
T Consensus        85 V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E---~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~  161 (410)
T 3v8s_A           85 VQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE---RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS  161 (410)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHH---HHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH
T ss_pred             EEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHH---HHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHH
Confidence            79999999999999999986433222223334444   566778899999999999999999999999999999999998


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCcc
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK  160 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~  160 (245)
                      ...+++..++.++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||+++
T Consensus       162 ~~~~~e~~~~~~~~qi~~aL~~LH~~givHr---DLKp~NI----------------------Ll~~~g~ikL~DFG~a~  216 (410)
T 3v8s_A          162 NYDVPEKWARFYTAEVVLALDAIHSMGFIHR---DVKPDNM----------------------LLDKSGHLKLADFGTCM  216 (410)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTSCEEECCCTTCE
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEec---cCCHHHe----------------------eECCCCCEEEeccceeE
Confidence            8889999999999999999999999999999   9999999                      88999999999999997


Q ss_pred             CCCCCCC-CCCcccCCCCccccccccCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCc--ccCC-
Q psy3347         161 EGMGFGD-RTGTFCGTPEFLAPEVLTETS----YTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDE--VRYP-  232 (245)
Q Consensus       161 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~--~~~p-  232 (245)
                      ....... .....+||+.|+|||.+.+..    ++.++|+|||||++|||++|+.||.+.+..+....+....  ..+| 
T Consensus       217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~  296 (410)
T 3v8s_A          217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD  296 (410)
T ss_dssp             ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCT
T ss_pred             eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCC
Confidence            5433221 234668999999999997655    7889999999999999999999999999888888887653  3444 


Q ss_pred             -CCCChhHHhhhcC
Q psy3347         233 -RFLSLEAIAIMRR  245 (245)
Q Consensus       233 -~~~~~~~~~li~~  245 (245)
                       ..+++++++||++
T Consensus       297 ~~~~s~~~~~li~~  310 (410)
T 3v8s_A          297 DNDISKEAKNLICA  310 (410)
T ss_dssp             TCCCCHHHHHHHHH
T ss_pred             cccccHHHHHHHHH
Confidence             4789999999863


No 34 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=3.3e-41  Score=286.13  Aligned_cols=216  Identities=27%  Similarity=0.451  Sum_probs=182.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchh---hHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARD---EVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~---~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|+++.+|+.||+|+++........   ..+.+.+   ++.+++.++||||++++++|...+..++||||+++++|.+
T Consensus        28 V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~---E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~  104 (361)
T 2yab_A           28 VKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIER---EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFD  104 (361)
T ss_dssp             EEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHH---HHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred             EEEEEECCCCCEEEEEEEEccccccccchhHHHHHHH---HHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHH
Confidence            799999999999999999875432211   1234444   4777889999999999999999999999999999999999


Q ss_pred             hhh-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCC----ceE
Q psy3347          78 HIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG----YVK  152 (245)
Q Consensus        78 ~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~k  152 (245)
                      ++. ...+++..+..++.|++.||.|||++||+||   |+||+||                      +++.++    .+|
T Consensus       105 ~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHr---Dlkp~NI----------------------ll~~~~~~~~~vk  159 (361)
T 2yab_A          105 FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF---DLKPENI----------------------MLLDKNIPIPHIK  159 (361)
T ss_dssp             HHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EESCTTSSSCCEE
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC---CCCHHHE----------------------EEeCCCCCccCEE
Confidence            985 4578999999999999999999999999999   8888888                      565555    799


Q ss_pred             EeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC
Q psy3347         153 IADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP  232 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p  232 (245)
                      |+|||++..... .......+||+.|+|||.+.+..++.++||||||+++|+|++|..||.+.+..+....+......++
T Consensus       160 l~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~  238 (361)
T 2yab_A          160 LIDFGLAHEIED-GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD  238 (361)
T ss_dssp             ECCCSSCEECCT-TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC
T ss_pred             EEecCCceEcCC-CCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC
Confidence            999999975332 2234456799999999999988999999999999999999999999999999898888888776654


Q ss_pred             ----CCCChhHHhhhcC
Q psy3347         233 ----RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ----~~~~~~~~~li~~  245 (245)
                          ..+++++++||++
T Consensus       239 ~~~~~~~s~~~~~li~~  255 (361)
T 2yab_A          239 EEFFSQTSELAKDFIRK  255 (361)
T ss_dssp             HHHHTTSCHHHHHHHHH
T ss_pred             chhccCCCHHHHHHHHH
Confidence                6789999998863


No 35 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=1.2e-41  Score=295.26  Aligned_cols=217  Identities=32%  Similarity=0.618  Sum_probs=182.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++++.........+.+.+|   ..++..++||||++++++|.+++..|+||||+++|+|.+++.
T Consensus        90 V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E---~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~  166 (437)
T 4aw2_A           90 VAVVKLKNADKVFAMKILNKWEMLKRAETACFREE---RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLS  166 (437)
T ss_dssp             EEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHH---HHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHH
T ss_pred             EEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHH---HHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHH
Confidence            79999999999999999986433222233334444   556677899999999999999999999999999999999996


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  ..+++..++.++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||+
T Consensus       167 ~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHr---DLKp~NI----------------------Ll~~~g~vkL~DFGl  221 (437)
T 4aw2_A          167 KFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR---DIKPDNI----------------------LMDMNGHIRLADFGS  221 (437)
T ss_dssp             TTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTSCEEECCCTT
T ss_pred             HccCCCCHHHHHHHHHHHHHHHHHHHhCCeEec---ccCHHHe----------------------eEcCCCCEEEcchhh
Confidence            4  579999999999999999999999999999   9999999                      889999999999999


Q ss_pred             ccCCCCCCC-CCCcccCCCCcccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCc--cc
Q psy3347         159 CKEGMGFGD-RTGTFCGTPEFLAPEVLT-----ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDE--VR  230 (245)
Q Consensus       159 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~--~~  230 (245)
                      ++....... .....+||+.|+|||.+.     ...++.++|||||||++|||++|+.||.+.+..+....+....  ..
T Consensus       222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~  301 (437)
T 4aw2_A          222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ  301 (437)
T ss_dssp             CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC
T ss_pred             hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccccc
Confidence            975433322 234468999999999996     4568899999999999999999999999999888888887543  34


Q ss_pred             CCC---CCChhHHhhhcC
Q psy3347         231 YPR---FLSLEAIAIMRR  245 (245)
Q Consensus       231 ~p~---~~~~~~~~li~~  245 (245)
                      +|.   .+++++++||++
T Consensus       302 ~p~~~~~~s~~~~dLi~~  319 (437)
T 4aw2_A          302 FPTQVTDVSENAKDLIRR  319 (437)
T ss_dssp             CCSSCCCSCHHHHHHHHT
T ss_pred             CCcccccCCHHHHHHHHH
Confidence            453   589999999875


No 36 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=3.7e-41  Score=282.19  Aligned_cols=217  Identities=39%  Similarity=0.762  Sum_probs=177.7

Q ss_pred             CEeEEEe---cCCcEEEEEEeecccccc-hhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchh
Q psy3347           1 VILSQYR---NTGEYFAIKALKKGDIIA-RDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~---~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|++.   .+|+.||+|+++...... ......+   .+++++++.++||||+++++++..++..|+||||+++++|.
T Consensus        33 V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~---~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~  109 (327)
T 3a62_A           33 VFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT---KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELF  109 (327)
T ss_dssp             EEEEEECSSTTTTCEEEEEEECCC-----------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHH
T ss_pred             EEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHH---HHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHH
Confidence            7889885   689999999998653221 1122233   34467788889999999999999999999999999999999


Q ss_pred             hhhh-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          77 MHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        77 ~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      +++. .+.+++..+..++.|++.||.|||++||+||   |+||+||                      +++.++.+||+|
T Consensus       110 ~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~---Dlkp~Ni----------------------ll~~~~~~kl~D  164 (327)
T 3a62_A          110 MQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYR---DLKPENI----------------------MLNHQGHVKLTD  164 (327)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCTTTE----------------------EECTTSCEEECC
T ss_pred             HHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcc---cCCHHHe----------------------EECCCCcEEEEe
Confidence            8885 4578999999999999999999999999999   8999898                      888899999999


Q ss_pred             cCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCC
Q psy3347         156 FGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFL  235 (245)
Q Consensus       156 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~  235 (245)
                      ||+++............+|++.|+|||.+.+..++.++||||||+++|+|++|+.||.+.+..+....+......+|..+
T Consensus       165 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~~  244 (327)
T 3a62_A          165 FGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYL  244 (327)
T ss_dssp             CSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTS
T ss_pred             CCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCC
Confidence            99987543333344566789999999999888899999999999999999999999999998888888988888889999


Q ss_pred             ChhHHhhhcC
Q psy3347         236 SLEAIAIMRR  245 (245)
Q Consensus       236 ~~~~~~li~~  245 (245)
                      ++++++||++
T Consensus       245 ~~~~~~li~~  254 (327)
T 3a62_A          245 TQEARDLLKK  254 (327)
T ss_dssp             CHHHHHHHHH
T ss_pred             CHHHHHHHHH
Confidence            9999999863


No 37 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=5.9e-41  Score=286.45  Aligned_cols=216  Identities=31%  Similarity=0.604  Sum_probs=182.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++...........+.+.+   ++++++.++||||++++++|...+..|+||||+.+|+|..++.
T Consensus        31 V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~---E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~  107 (384)
T 4fr4_A           31 VCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK---ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ  107 (384)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHH---HHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEehhhcccHHHHHHHHH---HHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHH
Confidence            7999999999999999998654333334444444   4677888999999999999999999999999999999999886


Q ss_pred             h-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 A-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 ~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                      . ..+++..++.++.|++.||.|||++||+||   |+||+||                      +++.+|.+||+|||++
T Consensus       108 ~~~~l~~~~~~~~~~qi~~aL~~LH~~givHr---Dlkp~NI----------------------ll~~~g~vkL~DFG~a  162 (384)
T 4fr4_A          108 QNVHFKEETVKLFICELVMALDYLQNQRIIHR---DMKPDNI----------------------LLDEHGHVHITDFNIA  162 (384)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTSCEEECCCTTC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCceec---cCcHHHe----------------------EECCCCCEEEecccee
Confidence            4 479999999999999999999999999999   9999999                      8889999999999999


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCC---CCHHHHHHHHhcCcccCCC
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTE---TSYTRAVDWWGLGVLIFEMLVGESPFPG---DDEEEVFDSIVNDEVRYPR  233 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~~g~~pf~~---~~~~~~~~~~~~~~~~~p~  233 (245)
                      .... ........+||+.|+|||.+.+   ..++.++|+|||||++|+|++|+.||.+   ....+....+......+|.
T Consensus       163 ~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~  241 (384)
T 4fr4_A          163 AMLP-RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPS  241 (384)
T ss_dssp             EECC-TTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCT
T ss_pred             eecc-CCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCC
Confidence            7532 2233456789999999999964   4588999999999999999999999964   3445666666777778899


Q ss_pred             CCChhHHhhhcC
Q psy3347         234 FLSLEAIAIMRR  245 (245)
Q Consensus       234 ~~~~~~~~li~~  245 (245)
                      .+++++.+||++
T Consensus       242 ~~s~~~~~li~~  253 (384)
T 4fr4_A          242 AWSQEMVSLLKK  253 (384)
T ss_dssp             TSCHHHHHHHHH
T ss_pred             cCCHHHHHHHHH
Confidence            999999999863


No 38 
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=2.1e-41  Score=308.01  Aligned_cols=217  Identities=48%  Similarity=0.899  Sum_probs=190.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|+++.+|+.||||++++.........+....|   ..++..+ +||||+++++++.+.+..|+||||+++|+|..++
T Consensus       357 V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E---~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l  433 (674)
T 3pfq_A          357 VMLSERKGTDELYAVKILKKDVVIQDDDVECTMVE---KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI  433 (674)
T ss_dssp             EEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHH---HHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHH
T ss_pred             EEEEEECCCCcEEEEEEEeccccccHHHHHHHHHH---HHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHH
Confidence            79999999999999999986543333444455555   3445444 7999999999999999999999999999999988


Q ss_pred             hh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          80 HA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        80 ~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .. +.+++..++.++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||+
T Consensus       434 ~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHr---DLKp~NI----------------------Ll~~~g~ikL~DFGl  488 (674)
T 3pfq_A          434 QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR---DLKLDNV----------------------MLDSEGHIKIADFGM  488 (674)
T ss_dssp             HHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECC---CCCSTTE----------------------EECSSSCEEECCCTT
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEec---cCChhhE----------------------EEcCCCcEEEeecce
Confidence            54 679999999999999999999999999999   9999999                      889999999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChh
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE  238 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (245)
                      ++............+||+.|+|||++.+..++.++|+||||+++|||++|+.||.+.+..+..+.+......+|..++++
T Consensus       489 a~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~  568 (674)
T 3pfq_A          489 CKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKE  568 (674)
T ss_dssp             CEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTSCHH
T ss_pred             eeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccCCHH
Confidence            98544444456677899999999999989999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcC
Q psy3347         239 AIAIMRR  245 (245)
Q Consensus       239 ~~~li~~  245 (245)
                      +++||++
T Consensus       569 ~~~li~~  575 (674)
T 3pfq_A          569 AVAICKG  575 (674)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863


No 39 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.6e-41  Score=291.11  Aligned_cols=217  Identities=32%  Similarity=0.588  Sum_probs=181.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++++.........+.+.+|   ..++..++||||++++++|.+.+..|+||||+++|+|..++.
T Consensus        77 V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E---~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~  153 (412)
T 2vd5_A           77 VAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREE---RDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLS  153 (412)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHH---HHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHH---HHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHH
Confidence            79999999999999999986443333334445444   555677899999999999999999999999999999999986


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  ..+++..++.++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||+
T Consensus       154 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHr---DLKp~NI----------------------Lld~~g~vkL~DFGl  208 (412)
T 2vd5_A          154 KFGERIPAEMARFYLAEIVMAIDSVHRLGYVHR---DIKPDNI----------------------LLDRCGHIRLADFGS  208 (412)
T ss_dssp             HHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTSCEEECCCTT
T ss_pred             hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec---ccCHHHe----------------------eecCCCCEEEeechh
Confidence            4  479999999999999999999999999999   9999999                      889999999999999


Q ss_pred             ccCCCCCCC-CCCcccCCCCcccccccc-------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCc--
Q psy3347         159 CKEGMGFGD-RTGTFCGTPEFLAPEVLT-------ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDE--  228 (245)
Q Consensus       159 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~-------~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~--  228 (245)
                      ++....... .....+||+.|+|||.+.       +..++.++|+|||||++|||++|+.||.+.+..+....+....  
T Consensus       209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~  288 (412)
T 2vd5_A          209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH  288 (412)
T ss_dssp             CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH
T ss_pred             heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC
Confidence            975433222 233468999999999997       3568899999999999999999999999998888888887532  


Q ss_pred             ccCC---CCCChhHHhhhcC
Q psy3347         229 VRYP---RFLSLEAIAIMRR  245 (245)
Q Consensus       229 ~~~p---~~~~~~~~~li~~  245 (245)
                      ..+|   ..+++++++||++
T Consensus       289 ~~~p~~~~~~s~~~~dli~~  308 (412)
T 2vd5_A          289 LSLPLVDEGVPEEARDFIQR  308 (412)
T ss_dssp             CCCC----CCCHHHHHHHHT
T ss_pred             cCCCccccCCCHHHHHHHHH
Confidence            2333   6799999999875


No 40 
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=5.4e-41  Score=297.51  Aligned_cols=217  Identities=34%  Similarity=0.614  Sum_probs=185.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++.+.........+.+.+|   .++++.++||||+++++++...+..|+||||++||+|..++.
T Consensus       201 Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E---~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~  277 (543)
T 3c4z_A          201 VFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVE---KKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY  277 (543)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHH---HHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHH
T ss_pred             EEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHH---HHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHH
Confidence            79999999999999999986543333334445444   566778899999999999999999999999999999998885


Q ss_pred             h-----cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          81 A-----DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        81 ~-----~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      .     ..+++..+..++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|
T Consensus       278 ~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHr---DLKP~NI----------------------Ll~~~g~vkL~D  332 (543)
T 3c4z_A          278 NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYR---DLKPENV----------------------LLDDDGNVRISD  332 (543)
T ss_dssp             TSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EECTTSCEEECC
T ss_pred             HhhcccccccHHHHHHHHHHHHHHHHHHHHcCCccc---CCChHHE----------------------EEeCCCCEEEee
Confidence            3     358999999999999999999999999999   9999999                      889999999999


Q ss_pred             cCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHhcCcccC
Q psy3347         156 FGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD----DEEEVFDSIVNDEVRY  231 (245)
Q Consensus       156 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~----~~~~~~~~~~~~~~~~  231 (245)
                      ||+++............+||+.|+|||.+.+..++.++|+|||||++|||++|+.||.+.    ...+....+......+
T Consensus       333 FGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~  412 (543)
T 3c4z_A          333 LGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY  412 (543)
T ss_dssp             CTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCC
T ss_pred             cceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCC
Confidence            999976443333344568999999999999989999999999999999999999999765    3466777777777888


Q ss_pred             CCCCChhHHhhhcC
Q psy3347         232 PRFLSLEAIAIMRR  245 (245)
Q Consensus       232 p~~~~~~~~~li~~  245 (245)
                      |..+++++++||++
T Consensus       413 p~~~s~~~~~li~~  426 (543)
T 3c4z_A          413 PDKFSPASKDFCEA  426 (543)
T ss_dssp             CTTSCHHHHHHHHH
T ss_pred             CcccCHHHHHHHHH
Confidence            99999999999863


No 41 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=1.2e-40  Score=289.71  Aligned_cols=216  Identities=26%  Similarity=0.464  Sum_probs=184.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.++.+|+.||+|++...... ....+.+.   +++++++.++||||+++++++..++..++||||+.+|+|.+.+.
T Consensus        27 V~~~~~~~~~~~~a~K~i~~~~~~-~~~~~~~~---~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~  102 (444)
T 3soa_A           27 VRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLE---REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV  102 (444)
T ss_dssp             EEEEEETTTTEEEEEEEEESCSCH-HHHHHHHH---HHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHH
T ss_pred             EEEEEECCCCcEEEEEEEEcccCC-HHHHHHHH---HHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHH
Confidence            799999999999999999875432 22233444   44777888899999999999999999999999999999988874


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccC---CCCceEEeec
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVND---TEGYVKIADF  156 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~kl~Df  156 (245)
                       ...+++..+..++.|++.||+|||++||+||   |+||+||                      +++   .++.+||+||
T Consensus       103 ~~~~~~e~~~~~i~~qil~aL~~lH~~givHr---DlKp~NI----------------------ll~~~~~~~~vkL~DF  157 (444)
T 3soa_A          103 AREYYSEADASHCIQQILEAVLHCHQMGVVHR---NLKPENL----------------------LLASKLKGAAVKLADF  157 (444)
T ss_dssp             HCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCC---CCSSTTE----------------------EESBSSTTCCEEECCC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---CCCHHHE----------------------EEeccCCCCcEEEccC
Confidence             4679999999999999999999999999999   8888888                      554   4678999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC----
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP----  232 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p----  232 (245)
                      |++..............||+.|+|||.+.+..++.++|||||||++|+|++|..||.+.+..+....+..+...+|    
T Consensus       158 G~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  237 (444)
T 3soa_A          158 GLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW  237 (444)
T ss_dssp             SSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTT
T ss_pred             ceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCcccc
Confidence            9997654444444566899999999999888899999999999999999999999999999999999888776654    


Q ss_pred             CCCChhHHhhhcC
Q psy3347         233 RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ~~~~~~~~~li~~  245 (245)
                      ..+++++++||++
T Consensus       238 ~~~s~~~~~li~~  250 (444)
T 3soa_A          238 DTVTPEAKDLINK  250 (444)
T ss_dssp             TTSCHHHHHHHHH
T ss_pred             ccCCHHHHHHHHH
Confidence            3689999998863


No 42 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=1.4e-41  Score=285.78  Aligned_cols=215  Identities=29%  Similarity=0.500  Sum_probs=180.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh-
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI-   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~-   79 (245)
                      ||+|++..+|+.||+|++.............+.   +++..++.++||||+++++++...+..++||||+ +|+|.+++ 
T Consensus        25 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~---~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~  100 (336)
T 3h4j_B           25 VKLATHYKTQQKVALKFISRQLLKKSDMHMRVE---REISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIV  100 (336)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHH---HHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEehHHccchhHHHHHH---HHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHH
Confidence            799999999999999999864322222223343   4477888999999999999999999999999999 56787766 


Q ss_pred             hhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          80 HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        80 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                      ....+++..+..++.|++.||.|||++|++||   |+||+||                      +++.++.+||+|||++
T Consensus       101 ~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~---Dlkp~NI----------------------ll~~~~~~kl~DFG~s  155 (336)
T 3h4j_B          101 EKKRMTEDEGRRFFQQIICAIEYCHRHKIVHR---DLKPENL----------------------LLDDNLNVKIADFGLS  155 (336)
T ss_dssp             HHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCC---CCSTTTE----------------------EECTTCCEEECCSSCT
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec---CCchhhE----------------------EEcCCCCEEEEEeccc
Confidence            45679999999999999999999999999999   9999998                      8888999999999998


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChh
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE  238 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (245)
                      .... ........+||+.|+|||.+.+..+ ++++||||||+++|+|++|+.||.+....+....+..+...+|..++++
T Consensus       156 ~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~  234 (336)
T 3h4j_B          156 NIMT-DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPG  234 (336)
T ss_dssp             BTTT-TSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHH
T ss_pred             eecc-CCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHH
Confidence            7533 2333456689999999999988776 6899999999999999999999988766665556666666788999999


Q ss_pred             HHhhhcC
Q psy3347         239 AIAIMRR  245 (245)
Q Consensus       239 ~~~li~~  245 (245)
                      +++||++
T Consensus       235 ~~~li~~  241 (336)
T 3h4j_B          235 AQSLIRR  241 (336)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHH
Confidence            9999875


No 43 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=2.3e-40  Score=273.39  Aligned_cols=217  Identities=24%  Similarity=0.367  Sum_probs=176.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+++.||+|++...........+.+   .+++..++.++||||+++++++..++..++||||+++++|.+++.
T Consensus        27 V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~---~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~  103 (294)
T 4eqm_A           27 VYLAEDTILNIKVAIKAIFIPPREKEETLKRF---EREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE  103 (294)
T ss_dssp             EEEEEETTTCSEEEEEEEECCSSCCHHHHHHH---HHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH
T ss_pred             EEEEEECCCCCeEEEEEeccCccccHHHHHHH---HHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHH
Confidence            79999999999999999976543333333444   445778889999999999999999999999999999999999885


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       .+++++..+..++.|++.||+|||++|++|+   |+||+||                      +++.++.+||+|||++
T Consensus       104 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---Dlkp~Ni----------------------l~~~~~~~kl~Dfg~~  158 (294)
T 4eqm_A          104 SHGPLSVDTAINFTNQILDGIKHAHDMRIVHR---DIKPQNI----------------------LIDSNKTLKIFDFGIA  158 (294)
T ss_dssp             HHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EECTTSCEEECCCSSS
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC---CCCHHHE----------------------EECCCCCEEEEeCCCc
Confidence             4579999999999999999999999999999   9999999                      8888999999999998


Q ss_pred             cCCCCCC-CCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCccc-----CCC
Q psy3347         160 KEGMGFG-DRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR-----YPR  233 (245)
Q Consensus       160 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~-----~p~  233 (245)
                      ....... .......||+.|+|||.+.+..++.++||||||+++|+|++|+.||.+.+..+..........+     .+.
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (294)
T 4eqm_A          159 KALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRK  238 (294)
T ss_dssp             TTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCT
T ss_pred             cccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhccc
Confidence            7543222 1233457899999999999988999999999999999999999999988877666555544332     346


Q ss_pred             CCChhHHhhhcC
Q psy3347         234 FLSLEAIAIMRR  245 (245)
Q Consensus       234 ~~~~~~~~li~~  245 (245)
                      .+++.+.++|.+
T Consensus       239 ~~~~~l~~li~~  250 (294)
T 4eqm_A          239 DIPQSLSNVILR  250 (294)
T ss_dssp             TSCHHHHHHHHH
T ss_pred             CCCHHHHHHHHH
Confidence            788888888753


No 44 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=2.8e-40  Score=280.57  Aligned_cols=215  Identities=29%  Similarity=0.518  Sum_probs=180.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.++.+|+.||+|++...... ....+.+.   +++++++.++||||+++++++.+.+..++||||+.+++|.+++.
T Consensus        45 V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~---~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~  120 (362)
T 2bdw_A           45 VRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLE---REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV  120 (362)
T ss_dssp             EEEEEETTTCCEEEEEEEETTTCC-HHHHHHHH---HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHT
T ss_pred             EEEEEECCCCCEEEEEEEEcccCC-HHHHHHHH---HHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHH
Confidence            799999999999999999865432 23334444   44777888899999999999999999999999999999988874


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC---CCceEEeec
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT---EGYVKIADF  156 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~kl~Df  156 (245)
                       ...+++..+..++.|++.||+|||++||+||   |+||+||                      +++.   ++.+||+||
T Consensus       121 ~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~---Dlkp~NI----------------------ll~~~~~~~~~kl~Df  175 (362)
T 2bdw_A          121 AREFYSEADASHCIQQILESIAYCHSNGIVHR---NLKPENL----------------------LLASKAKGAAVKLADF  175 (362)
T ss_dssp             TCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCC---CCSGGGE----------------------EESCSSTTCCEEECCC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec---cCchHHE----------------------EEecCCCCCCEEEeec
Confidence             4578999999999999999999999999999   8888888                      5544   356999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC----
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP----  232 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p----  232 (245)
                      |++..... ........||+.|+|||.+.+..++.++|||||||++|+|++|..||.+.+..+....+..+...+|    
T Consensus       176 G~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  254 (362)
T 2bdw_A          176 GLAIEVND-SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW  254 (362)
T ss_dssp             TTCBCCTT-CCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGG
T ss_pred             CcceEecC-CcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccc
Confidence            99975432 2233456789999999999888899999999999999999999999999988888888888776655    


Q ss_pred             CCCChhHHhhhcC
Q psy3347         233 RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ~~~~~~~~~li~~  245 (245)
                      ..+++++++||++
T Consensus       255 ~~~~~~~~~li~~  267 (362)
T 2bdw_A          255 DTVTPEAKSLIDS  267 (362)
T ss_dssp             GGSCHHHHHHHHH
T ss_pred             cCCCHHHHHHHHH
Confidence            3578899998863


No 45 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=7.7e-41  Score=292.93  Aligned_cols=216  Identities=29%  Similarity=0.526  Sum_probs=186.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++...........+.+.   ++++.++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        32 V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~---~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~  108 (476)
T 2y94_A           32 VKVGKHELTGHKVAVKILNRQKIRSLDVVGKIR---REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYIC  108 (476)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHH---HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTT
T ss_pred             EEEEEECCCCCEEEEEEEEhhhccCHHHHHHHH---HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHH
Confidence            799999999999999999864332222233444   45778889999999999999999999999999999999999885


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       .+.+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+|||++
T Consensus       109 ~~~~l~~~~~~~i~~qi~~aL~~LH~~givHr---DLkp~NI----------------------ll~~~~~vkL~DFG~a  163 (476)
T 2y94_A          109 KNGRLDEKESRRLFQQILSGVDYCHRHMVVHR---DLKPENV----------------------LLDAHMNAKIADFGLS  163 (476)
T ss_dssp             SSSSCCHHHHHHHHHHHHHHHHHHHTTTEECS---CCSGGGE----------------------EECTTCCEEECCCSSC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcc---cccHHHE----------------------EEecCCCeEEEeccch
Confidence             4579999999999999999999999999999   9999999                      8888999999999999


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChh
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE  238 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (245)
                      .... ........+|++.|+|||.+.+..+ +.++|||||||++|+|++|+.||.+.+..+....+..+....|..++++
T Consensus       164 ~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~  242 (476)
T 2y94_A          164 NMMS-DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPS  242 (476)
T ss_dssp             EECC-TTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTTCCHH
T ss_pred             hhcc-ccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCccCCHH
Confidence            7532 2233456689999999999988765 6899999999999999999999998888888888888888889999999


Q ss_pred             HHhhhcC
Q psy3347         239 AIAIMRR  245 (245)
Q Consensus       239 ~~~li~~  245 (245)
                      +++||++
T Consensus       243 ~~~Li~~  249 (476)
T 2y94_A          243 VISLLKH  249 (476)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863


No 46 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.6e-40  Score=276.11  Aligned_cols=216  Identities=26%  Similarity=0.455  Sum_probs=180.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchh---hHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARD---EVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~---~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|+++.+|+.||+|++.........   ..+.+.+   ++.+++.++||||+++++++...+..++||||+++++|.+
T Consensus        27 V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~---E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  103 (326)
T 2y0a_A           27 VKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD  103 (326)
T ss_dssp             EEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHH---HHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred             EEEEEECCCCcEEEEEEEEccccccccchhhHHHHHH---HHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHH
Confidence            799999999999999999865432211   2334444   4677888899999999999999999999999999999999


Q ss_pred             hhh-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCC----ceE
Q psy3347          78 HIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG----YVK  152 (245)
Q Consensus        78 ~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~k  152 (245)
                      ++. ...+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++    .+|
T Consensus       104 ~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~---Dlkp~NI----------------------ll~~~~~~~~~~k  158 (326)
T 2y0a_A          104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF---DLKPENI----------------------MLLDRNVPKPRIK  158 (326)
T ss_dssp             HHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EESCSSSSSCCEE
T ss_pred             HHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcC---CCCHHHE----------------------EEecCCCCCCCEE
Confidence            985 4578999999999999999999999999999   8888888                      666666    799


Q ss_pred             EeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC
Q psy3347         153 IADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP  232 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p  232 (245)
                      |+|||++..... ........||+.|+|||.+.+..++.++|||||||++|+|++|..||.+.+..+....+......++
T Consensus       159 l~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~  237 (326)
T 2y0a_A          159 IIDFGLAHKIDF-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE  237 (326)
T ss_dssp             ECCCTTCEECCT-TSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCC
T ss_pred             EEECCCCeECCC-CCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcC
Confidence            999999875322 2233456789999999999888899999999999999999999999999888888887776655543


Q ss_pred             ----CCCChhHHhhhcC
Q psy3347         233 ----RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ----~~~~~~~~~li~~  245 (245)
                          ..+++++++||++
T Consensus       238 ~~~~~~~~~~~~~li~~  254 (326)
T 2y0a_A          238 DEYFSNTSALAKDFIRR  254 (326)
T ss_dssp             HHHHTTSCHHHHHHHHH
T ss_pred             ccccccCCHHHHHHHHH
Confidence                5788888888763


No 47 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=3.1e-40  Score=272.78  Aligned_cols=217  Identities=29%  Similarity=0.521  Sum_probs=178.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccch-----------------------hhHHHHHHHHHHHHHHhhcCCCceeeeeEEE
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIAR-----------------------DEVESLLSEKRIFEVANTMRHPFLVNLFACF   57 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~-----------------------~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~   57 (245)
                      ||+|+++.+|+.||+|++........                       ...+.+   .+++++++.++||||+++++++
T Consensus        29 Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~E~~~l~~l~h~~iv~~~~~~  105 (298)
T 2zv2_A           29 VKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQV---YQEIAILKKLDHPNVVKLVEVL  105 (298)
T ss_dssp             EEEEEETTTTEEEEEEEEECC-------------------------------CHH---HHHHHHHHTCCCTTBCCEEEEE
T ss_pred             EEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHH---HHHHHHHHhCCCCCCCeEEEEE
Confidence            79999999999999999986532211                       112233   4457788899999999999999


Q ss_pred             ee--CCeEEEEEeeccCCchhhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccC
Q psy3347          58 QT--EAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVN  135 (245)
Q Consensus        58 ~~--~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~  135 (245)
                      ..  .+..++||||+++++|.++.....+++..+..++.|++.||+|||++|++|+   |++|+||              
T Consensus       106 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~---Dlkp~Ni--------------  168 (298)
T 2zv2_A          106 DDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHR---DIKPSNL--------------  168 (298)
T ss_dssp             ECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE--------------
T ss_pred             EcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc---CCCHHHE--------------
Confidence            86  5689999999999999988877789999999999999999999999999999   9999999              


Q ss_pred             cccchhccccCCCCceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCC---CCcchhHHHHHHHHHHHHhCCCCC
Q psy3347         136 SSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETS---YTRAVDWWGLGVLIFEMLVGESPF  212 (245)
Q Consensus       136 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~~l~el~~g~~pf  212 (245)
                              +++.++.+||+|||++..............||..|+|||.+.+..   ++.++||||||+++|+|++|+.||
T Consensus       169 --------l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf  240 (298)
T 2zv2_A          169 --------LVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF  240 (298)
T ss_dssp             --------EECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             --------EECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence                    888899999999999875443333344567899999999997654   367899999999999999999999


Q ss_pred             CCCCHHHHHHHHhcCcccCC--CCCChhHHhhhcC
Q psy3347         213 PGDDEEEVFDSIVNDEVRYP--RFLSLEAIAIMRR  245 (245)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~li~~  245 (245)
                      .+.........+......+|  ..+++++++||++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  275 (298)
T 2zv2_A          241 MDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITR  275 (298)
T ss_dssp             CCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHH
T ss_pred             CCccHHHHHHHHhcccCCCCCccccCHHHHHHHHH
Confidence            98888777777766655554  4788999998863


No 48 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=4.7e-40  Score=274.86  Aligned_cols=213  Identities=24%  Similarity=0.442  Sum_probs=181.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||||++.....   ...+.+.+   ++..++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        61 V~~a~~~~~g~~vavK~~~~~~~---~~~~~~~~---E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  134 (321)
T 2c30_A           61 VCLAREKHSGRQVAVKMMDLRKQ---QRRELLFN---EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS  134 (321)
T ss_dssp             EEEEEETTTCCEEEEEEEETTTC---CSHHHHHH---HHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT
T ss_pred             EEEEEECCCCcEEEEEEEeccch---hHHHHHHH---HHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH
Confidence            79999999999999999976432   22233443   4777889999999999999999999999999999999999998


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCcc
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK  160 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~  160 (245)
                      ...+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.+||+|||++.
T Consensus       135 ~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~kl~Dfg~~~  189 (321)
T 2c30_A          135 QVRLNEEQIATVCEAVLQALAYLHAQGVIHR---DIKSDSI----------------------LLTLDGRVKLSDFGFCA  189 (321)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTCCEEECCCTTCE
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHCCeecC---CCCHHHE----------------------EECCCCcEEEeeeeeee
Confidence            8889999999999999999999999999999   9999999                      88889999999999987


Q ss_pred             CCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCccc---CCCCCCh
Q psy3347         161 EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR---YPRFLSL  237 (245)
Q Consensus       161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~---~p~~~~~  237 (245)
                      .............||..|+|||.+.+..++.++||||||+++|+|++|+.||.+.+..+....+.....+   .+..+++
T Consensus       190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (321)
T 2c30_A          190 QISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSP  269 (321)
T ss_dssp             ECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCH
T ss_pred             ecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCH
Confidence            5444333345667899999999998888999999999999999999999999988887777777655432   2345788


Q ss_pred             hHHhhhc
Q psy3347         238 EAIAIMR  244 (245)
Q Consensus       238 ~~~~li~  244 (245)
                      +++++|+
T Consensus       270 ~l~~li~  276 (321)
T 2c30_A          270 VLRDFLE  276 (321)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8888875


No 49 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=3.9e-40  Score=269.11  Aligned_cols=215  Identities=30%  Similarity=0.531  Sum_probs=170.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh-
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI-   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~-   79 (245)
                      ||+|++..+|+.||+|++...........+.+.+   +++.++.++||||+++++++...+..++||||+ ++++.+++ 
T Consensus        29 V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~---e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~  104 (275)
T 2eue_A           29 VKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER---EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIV  104 (275)
T ss_dssp             EEEEECTTTCCEEEEEEECSCC-----CHHHHHH---HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-CEEHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHH---HHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-CCcHHHHHH
Confidence            7999999999999999998654333333344444   467778889999999999999999999999999 55666655 


Q ss_pred             hhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          80 HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        80 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                      ....+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.++|+|||++
T Consensus       105 ~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~---dikp~Ni----------------------l~~~~~~~kl~Dfg~~  159 (275)
T 2eue_A          105 QRDKMSEQEARRFFQQIISAVEYCHRHKIVHR---DLKPENL----------------------LLDEHLNVKIADFGLS  159 (275)
T ss_dssp             TSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCSGGGE----------------------EECTTSCEEECCSSCC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec---cCChHhE----------------------EECCCCCEEEeecccc
Confidence            45679999999999999999999999999999   9999998                      8888999999999998


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChh
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE  238 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (245)
                      ..... ........|+..|+|||.+.+..+ +.++||||||+++|+|++|+.||.+.+.......+..+...+|..++++
T Consensus       160 ~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (275)
T 2eue_A          160 NIMTD-GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPG  238 (275)
T ss_dssp             ----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHH
T ss_pred             eeccC-cccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHH
Confidence            75322 222345568999999999987765 6899999999999999999999999998888888888888899999999


Q ss_pred             HHhhhcC
Q psy3347         239 AIAIMRR  245 (245)
Q Consensus       239 ~~~li~~  245 (245)
                      +.+||++
T Consensus       239 ~~~li~~  245 (275)
T 2eue_A          239 AAGLIKR  245 (275)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863


No 50 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=4.3e-40  Score=278.29  Aligned_cols=216  Identities=30%  Similarity=0.539  Sum_probs=174.7

Q ss_pred             CEeEEEecCCcEEEEEEeecccccch--hhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIAR--DEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|.++.+|+.||+|++........  ...+.+.+|   +++++.++||||+++++++..++..++||||+++++|.+.
T Consensus        40 V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E---~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~  116 (351)
T 3c0i_A           40 VRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKRE---ASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFE  116 (351)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHH---HHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHH---HHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHH
Confidence            79999999999999999975432111  123344444   6777888999999999999999999999999999999877


Q ss_pred             hhh-----cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCC---Cc
Q psy3347          79 IHA-----DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTE---GY  150 (245)
Q Consensus        79 ~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  150 (245)
                      +..     ..+++..+..++.|++.||+|||++||+||   |+||+||                      +++.+   +.
T Consensus       117 l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHr---Dlkp~NI----------------------l~~~~~~~~~  171 (351)
T 3c0i_A          117 IVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHR---DVKPHCV----------------------LLASKENSAP  171 (351)
T ss_dssp             HHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECSSSTTCC
T ss_pred             HHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceec---cCChHHe----------------------EEecCCCCCc
Confidence            632     248999999999999999999999999999   8888888                      55544   44


Q ss_pred             eEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCccc
Q psy3347         151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR  230 (245)
Q Consensus       151 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~  230 (245)
                      +||+|||++.............+||+.|+|||.+.+..++.++|||||||++|+|++|+.||.+. ..+....+..+...
T Consensus       172 vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~~~  250 (351)
T 3c0i_A          172 VKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYK  250 (351)
T ss_dssp             EEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTCCC
T ss_pred             EEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCCCC
Confidence            99999999976444333344567899999999999888999999999999999999999999875 45566666666554


Q ss_pred             CC----CCCChhHHhhhcC
Q psy3347         231 YP----RFLSLEAIAIMRR  245 (245)
Q Consensus       231 ~p----~~~~~~~~~li~~  245 (245)
                      ++    ..+++++++||++
T Consensus       251 ~~~~~~~~~s~~~~~li~~  269 (351)
T 3c0i_A          251 MNPRQWSHISESAKDLVRR  269 (351)
T ss_dssp             CCHHHHTTSCHHHHHHHHH
T ss_pred             CCccccccCCHHHHHHHHH
Confidence            43    5788999988863


No 51 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.2e-40  Score=275.19  Aligned_cols=212  Identities=25%  Similarity=0.440  Sum_probs=180.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.++.+|+.||+|++....    ...+.+.   +++++++.++||||+++++++.+.+..++||||+++++|.+++.
T Consensus        21 Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~---~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~   93 (321)
T 1tki_A           21 VHRCVETSSKKTYMAKFVKVKG----TDQVLVK---KEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERIN   93 (321)
T ss_dssp             EEEEEETTTTEEEEEEEECCCT----HHHHHHH---HHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHT
T ss_pred             EEEEEECCCCcEEEEEEEecCc----ccHHHHH---HHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHH
Confidence            7999999999999999997532    2223344   44677888899999999999999999999999999999999986


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC--CCceEEeec
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT--EGYVKIADF  156 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~kl~Df  156 (245)
                      .  ..+++..+..++.|++.||.|||++|++||   |+||+||                      +++.  ++.+||+||
T Consensus        94 ~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~---Dlkp~NI----------------------l~~~~~~~~~kl~Df  148 (321)
T 1tki_A           94 TSAFELNEREIVSYVHQVCEALQFLHSHNIGHF---DIRPENI----------------------IYQTRRSSTIKIIEF  148 (321)
T ss_dssp             SSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EESSSSCCCEEECCC
T ss_pred             hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcC---CCCHHHE----------------------EEccCCCCCEEEEEC
Confidence            4  368999999999999999999999999999   8888888                      5554  789999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC----
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP----  232 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p----  232 (245)
                      |++..... ........|++.|+|||.+.+..++.++||||||+++|+|++|..||.+.+..+....+......++    
T Consensus       149 g~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  227 (321)
T 1tki_A          149 GQARQLKP-GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF  227 (321)
T ss_dssp             TTCEECCT-TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHH
T ss_pred             CCCeECCC-CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhh
Confidence            99975322 2223455789999999999888889999999999999999999999999999888888888776655    


Q ss_pred             CCCChhHHhhhcC
Q psy3347         233 RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ~~~~~~~~~li~~  245 (245)
                      ..+++++++||++
T Consensus       228 ~~~s~~~~~li~~  240 (321)
T 1tki_A          228 KEISIEAMDFVDR  240 (321)
T ss_dssp             TTSCHHHHHHHHT
T ss_pred             ccCCHHHHHHHHH
Confidence            4789999999864


No 52 
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=3.2e-40  Score=293.58  Aligned_cols=216  Identities=35%  Similarity=0.578  Sum_probs=182.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++.+.........+.+.+|   .++++.++||||+++++++.+.+..|+||||++||+|..++.
T Consensus       200 Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E---~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~  276 (576)
T 2acx_A          200 VCACQVRATGKMYACKKLEKKRIKKRKGEAMALNE---KQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY  276 (576)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHH---HHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHH---HHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHH
Confidence            79999999999999999986543333333444444   666778899999999999999999999999999999998885


Q ss_pred             hc---CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          81 AD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        81 ~~---~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      ..   .+++..++.++.|++.||+|||++||+||   |+||+||                      +++.+|.+||+|||
T Consensus       277 ~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHr---DLKPeNI----------------------Lld~~g~vKL~DFG  331 (576)
T 2acx_A          277 HMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR---DLKPENI----------------------LLDDHGHIRISDLG  331 (576)
T ss_dssp             SSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EECTTSCEEECCCT
T ss_pred             hcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEecc---CCchheE----------------------EEeCCCCeEEEecc
Confidence            42   48999999999999999999999999999   9999999                      88899999999999


Q ss_pred             CccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHhcCcccCCC
Q psy3347         158 LCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD----DEEEVFDSIVNDEVRYPR  233 (245)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~----~~~~~~~~~~~~~~~~p~  233 (245)
                      ++...... ......+||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.    ...+....+......+|.
T Consensus       332 la~~~~~~-~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~  410 (576)
T 2acx_A          332 LAVHVPEG-QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSE  410 (576)
T ss_dssp             TCEECCTT-CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCT
T ss_pred             cceecccC-ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCc
Confidence            99753222 2234458999999999999888999999999999999999999999765    345566666777777889


Q ss_pred             CCChhHHhhhcC
Q psy3347         234 FLSLEAIAIMRR  245 (245)
Q Consensus       234 ~~~~~~~~li~~  245 (245)
                      .+++++++||++
T Consensus       411 ~~s~~~~dLI~~  422 (576)
T 2acx_A          411 RFSPQARSLCSQ  422 (576)
T ss_dssp             TSCHHHHHHHHH
T ss_pred             cCCHHHHHHHHH
Confidence            999999999863


No 53 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=1.6e-39  Score=276.98  Aligned_cols=213  Identities=28%  Similarity=0.470  Sum_probs=180.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|+++....   ...+.+.   +++++++.++||||+++++++...+..++||||+++++|.+++.
T Consensus       105 Vy~a~~~~~g~~vavK~~~~~~~---~~~~~~~---~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~  178 (373)
T 2x4f_A          105 VHKCEETATGLKLAAKIIKTRGM---KDKEEVK---NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII  178 (373)
T ss_dssp             EEEEEETTTCCEEEEEEEECCSH---HHHHHHH---HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHH
T ss_pred             EEEEEEcCCCcEEEEEEEccccc---ccHHHHH---HHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHH
Confidence            79999999999999999986432   2233343   45778889999999999999999999999999999999988874


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc--CCCCceEEeec
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN--DTEGYVKIADF  156 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~kl~Df  156 (245)
                      .  ..+++..+..++.|++.||+|||++||+||   |+||+||                      ++  +.++.+||+||
T Consensus       179 ~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~~~kl~DF  233 (373)
T 2x4f_A          179 DESYNLTELDTILFMKQICEGIRHMHQMYILHL---DLKPENI----------------------LCVNRDAKQIKIIDF  233 (373)
T ss_dssp             HTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EEEETTTTEEEECCC
T ss_pred             hcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---cCCHHHE----------------------EEecCCCCcEEEEeC
Confidence            3  468999999999999999999999999999   8888888                      55  56788999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC----
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP----  232 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p----  232 (245)
                      |+++..... ......+||+.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+..+....+......++    
T Consensus       234 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~  312 (373)
T 2x4f_A          234 GLARRYKPR-EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEF  312 (373)
T ss_dssp             SSCEECCTT-CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGG
T ss_pred             CCceecCCc-cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhh
Confidence            999753322 223455789999999999888899999999999999999999999999988888888877665543    


Q ss_pred             CCCChhHHhhhcC
Q psy3347         233 RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ~~~~~~~~~li~~  245 (245)
                      ..+++++++||++
T Consensus       313 ~~~~~~~~~li~~  325 (373)
T 2x4f_A          313 QDISEEAKEFISK  325 (373)
T ss_dssp             TTSCHHHHHHHHT
T ss_pred             ccCCHHHHHHHHH
Confidence            5688999999864


No 54 
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=2.8e-39  Score=266.49  Aligned_cols=216  Identities=28%  Similarity=0.497  Sum_probs=186.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|++...........+.+.+   +++.++.++||||+++++++...+..+++|||+++++|.+++.
T Consensus        31 Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~---e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  107 (294)
T 2rku_A           31 CFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK  107 (294)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHH---HHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH
T ss_pred             EEEEEECCCCceEEEEEechhhccCHHHHHHHHH---HHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHH
Confidence            7999999999999999998654333334444444   4677888999999999999999999999999999999998885


Q ss_pred             h-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 A-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 ~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                      . ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||++
T Consensus       108 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~---dl~p~Ni----------------------l~~~~~~~kl~dfg~~  162 (294)
T 2rku_A          108 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHR---DLKLGNL----------------------FLNEDLEVKIGDFGLA  162 (294)
T ss_dssp             HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EECTTCCEEECCCTTC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---CCChHhE----------------------EEcCCCCEEEEeccCc
Confidence            4 578999999999999999999999999999   9999998                      8888999999999998


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChhH
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA  239 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (245)
                      ..............|+..|+|||.+.+..++.++|+||||+++|+|++|+.||.+....+....+.......|..+++++
T Consensus       163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (294)
T 2rku_A          163 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA  242 (294)
T ss_dssp             EECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHH
T ss_pred             eecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccccCHHH
Confidence            75443333344567899999999998888999999999999999999999999988888887788777778888999999


Q ss_pred             Hhhhc
Q psy3347         240 IAIMR  244 (245)
Q Consensus       240 ~~li~  244 (245)
                      .++|+
T Consensus       243 ~~li~  247 (294)
T 2rku_A          243 ASLIQ  247 (294)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98886


No 55 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=1.2e-39  Score=271.13  Aligned_cols=214  Identities=27%  Similarity=0.449  Sum_probs=170.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++  +|+.||+|++..... .....+.+.   +++++++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        53 V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~---~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  126 (309)
T 3p86_A           53 VHRAEW--HGSDVAVKILMEQDF-HAERVNEFL---REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH  126 (309)
T ss_dssp             EEEEEE--TTEEEEEEEECCCCC-SHHHHHHHH---HHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHH
T ss_pred             EEEEEE--CCCcEEEEEecCCCC-CHHHHHHHH---HHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHh
Confidence            788976  588999999976532 223334444   44777888899999999999999999999999999999999986


Q ss_pred             hc----CCChHHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          81 AD----VFSEPRAVFYAACVVLGLQYLHESR--IIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        81 ~~----~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      ..    .+++..+..++.|++.||+|||++|  ++||   |+||+||                      +++.++.+||+
T Consensus       127 ~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~---Dikp~NI----------------------ll~~~~~~kL~  181 (309)
T 3p86_A          127 KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHR---NLKSPNL----------------------LVDKKYTVKVC  181 (309)
T ss_dssp             STTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCT---TCCGGGE----------------------EECTTCCEEEC
T ss_pred             hcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECC---CCChhhE----------------------EEeCCCcEEEC
Confidence            43    3899999999999999999999999  9999   9999998                      88889999999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CcccCC
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN--DEVRYP  232 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~--~~~~~p  232 (245)
                      |||+++.............|+..|+|||.+.+..++.++||||||+++|+|++|+.||.+.+..+....+..  ....+|
T Consensus       182 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~  261 (309)
T 3p86_A          182 DFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP  261 (309)
T ss_dssp             CCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCC
T ss_pred             CCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC
Confidence            999987543333334456789999999999998899999999999999999999999998888877777643  344578


Q ss_pred             CCCChhHHhhhcC
Q psy3347         233 RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ~~~~~~~~~li~~  245 (245)
                      ..+++++.+||++
T Consensus       262 ~~~~~~l~~li~~  274 (309)
T 3p86_A          262 RNLNPQVAAIIEG  274 (309)
T ss_dssp             TTSCHHHHHHHHH
T ss_pred             ccCCHHHHHHHHH
Confidence            8999999998863


No 56 
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=2.3e-39  Score=272.13  Aligned_cols=217  Identities=28%  Similarity=0.499  Sum_probs=187.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+++.||+|++...........+.+.+   ++.+++.++||||+++++++.+.+..++||||+++++|.+++.
T Consensus        57 Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~---E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  133 (335)
T 2owb_A           57 CFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK  133 (335)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHH---HHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEechhhhcCHHHHHHHHH---HHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHh
Confidence            7999999999999999998654333334444444   4677888999999999999999999999999999999998885


Q ss_pred             h-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 A-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 ~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                      . ..+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.++|+|||++
T Consensus       134 ~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~---dlkp~NI----------------------l~~~~~~~kl~Dfg~~  188 (335)
T 2owb_A          134 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHR---DLKLGNL----------------------FLNEDLEVKIGDFGLA  188 (335)
T ss_dssp             HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCCGGGE----------------------EECTTCCEEECCCTTC
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHCCCEec---CCCchhE----------------------EEcCCCCEEEeeccCc
Confidence            4 679999999999999999999999999999   9999998                      8888999999999998


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChhH
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA  239 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (245)
                      ..............|+..|+|||.+.+..++.++||||||+++|+|++|+.||.+....+....+......+|..+++++
T Consensus       189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (335)
T 2owb_A          189 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA  268 (335)
T ss_dssp             EECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHH
T ss_pred             eecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCccCCHHH
Confidence            75443333344567899999999998888999999999999999999999999988888887778777778889999999


Q ss_pred             HhhhcC
Q psy3347         240 IAIMRR  245 (245)
Q Consensus       240 ~~li~~  245 (245)
                      .+||++
T Consensus       269 ~~li~~  274 (335)
T 2owb_A          269 ASLIQK  274 (335)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998863


No 57 
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=4e-40  Score=269.32  Aligned_cols=217  Identities=27%  Similarity=0.513  Sum_probs=158.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|++...........+.+   .++++.++.++||||+++++++...+..+++|||+++++|.+++.
T Consensus        27 Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~---~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  103 (278)
T 3cok_A           27 VYRAESIHTGLEVAIKMIDKKAMYKAGMVQRV---QNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLK  103 (278)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHTTCHHHH---HHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHH
T ss_pred             EEEEEEccCCceEEEEEeehhhhhhhhHHHHH---HHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHh
Confidence            79999999999999999975432222222333   445778889999999999999999999999999999999999886


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||+
T Consensus       104 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---dl~p~Ni----------------------li~~~~~~kl~dfg~  158 (278)
T 3cok_A          104 NRVKPFSENEARHFMHQIITGMLYLHSHGILHR---DLTLSNL----------------------LLTRNMNIKIADFGL  158 (278)
T ss_dssp             TCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECS---SCCGGGE----------------------EECTTCCEEECCCTT
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHHHHCCeecC---CCCHHHE----------------------EEcCCCCEEEEeecc
Confidence            4  568999999999999999999999999999   8999998                      888899999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChh
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE  238 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (245)
                      +..............|+..|+|||.+.+..++.++||||||+++|+|++|+.||......+....+.......|..++++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (278)
T 3cok_A          159 ATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIE  238 (278)
T ss_dssp             CEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHH
T ss_pred             eeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHH
Confidence            87543333333455788999999999888899999999999999999999999987766666666666666778889999


Q ss_pred             HHhhhcC
Q psy3347         239 AIAIMRR  245 (245)
Q Consensus       239 ~~~li~~  245 (245)
                      +++||++
T Consensus       239 ~~~li~~  245 (278)
T 3cok_A          239 AKDLIHQ  245 (278)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998863


No 58 
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=1.4e-39  Score=266.30  Aligned_cols=215  Identities=30%  Similarity=0.568  Sum_probs=182.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+++.||+|++.............+   .++++.++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        25 V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~---~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~  101 (279)
T 3fdn_A           25 VYLAREKQSKFILALKVLFKAQLEKAGVEHQL---RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ  101 (279)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHHTCHHHH---HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH
T ss_pred             EEEEEEccCCcEEEEEEEeccccchhhHHHHH---HHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHH
Confidence            79999999999999999976432222222333   345778889999999999999999999999999999999998885


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       ...+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||++
T Consensus       102 ~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~---dlkp~Ni----------------------li~~~~~~~l~Dfg~~  156 (279)
T 3fdn_A          102 KLSKFDEQRTATYITELANALSYCHSKRVIHR---DIKPENL----------------------LLGSAGELKIADFGWS  156 (279)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHTTTCEEC---CCCGGGE----------------------EECTTSCEEECSCCEE
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHhCCEecc---cCChHhE----------------------EEcCCCCEEEEecccc
Confidence             4678999999999999999999999999999   9999998                      8888999999999988


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChhH
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA  239 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (245)
                      .....  .......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.+.+..+....+......+|..+++++
T Consensus       157 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (279)
T 3fdn_A          157 VHAPS--SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA  234 (279)
T ss_dssp             SCC----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHH
T ss_pred             ccCCc--ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHH
Confidence            64322  2234557899999999998888999999999999999999999999999988888888888888899999999


Q ss_pred             HhhhcC
Q psy3347         240 IAIMRR  245 (245)
Q Consensus       240 ~~li~~  245 (245)
                      ++||++
T Consensus       235 ~~li~~  240 (279)
T 3fdn_A          235 RDLISR  240 (279)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998863


No 59 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=1.5e-39  Score=272.22  Aligned_cols=210  Identities=26%  Similarity=0.457  Sum_probs=154.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcC-CCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMR-HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~-h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|+++.+|+.||+|++....      .....+   ++..++.+. ||||+++++++.+++..++||||+++++|.+++
T Consensus        27 V~~~~~~~~~~~vavK~~~~~~------~~~~~~---e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l   97 (325)
T 3kn6_A           27 CRKCVHKKSNQAFAVKIISKRM------EANTQK---EITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERI   97 (325)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGG------HHHHHH---HHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEChhh------hhhHHH---HHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHH
Confidence            7999999999999999997531      123333   355666665 999999999999999999999999999999988


Q ss_pred             hh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCC---ceEEee
Q psy3347          80 HA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG---YVKIAD  155 (245)
Q Consensus        80 ~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~kl~D  155 (245)
                      .. ..+++..+..++.|++.||+|||++||+||   |++|+||                      +++.++   .+||+|
T Consensus        98 ~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~~~~kl~D  152 (325)
T 3kn6_A           98 KKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR---DLKPENL----------------------LFTDENDNLEIKIID  152 (325)
T ss_dssp             HHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EEEC----CEEEECC
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec---CCCHHHE----------------------EEecCCCcccEEEec
Confidence            54 569999999999999999999999999999   8888888                      554444   899999


Q ss_pred             cCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC-------CHHHHHHHHhcCc
Q psy3347         156 FGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD-------DEEEVFDSIVNDE  228 (245)
Q Consensus       156 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~-------~~~~~~~~~~~~~  228 (245)
                      ||+++............+||..|+|||.+.+..++.++||||||+++|+|++|+.||.+.       ...+....+..+.
T Consensus       153 fg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~  232 (325)
T 3kn6_A          153 FGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD  232 (325)
T ss_dssp             CTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC
T ss_pred             cccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC
Confidence            999975444333445667899999999999889999999999999999999999999764       3356677777766


Q ss_pred             ccCC----CCCChhHHhhhc
Q psy3347         229 VRYP----RFLSLEAIAIMR  244 (245)
Q Consensus       229 ~~~p----~~~~~~~~~li~  244 (245)
                      ..++    ..+++++++||+
T Consensus       233 ~~~~~~~~~~~s~~~~~li~  252 (325)
T 3kn6_A          233 FSFEGEAWKNVSQEAKDLIQ  252 (325)
T ss_dssp             CCCCSHHHHTSCHHHHHHHH
T ss_pred             CCCCcccccCCCHHHHHHHH
Confidence            6554    358899998886


No 60 
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=4.7e-40  Score=273.44  Aligned_cols=217  Identities=26%  Similarity=0.361  Sum_probs=172.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC----eEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA----HVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~----~~~lv~e~~~~~~L~   76 (245)
                      ||+|++..+|+.||+|++.............+   .++++.++.++||||+++++++...+    ..|+||||+++++|.
T Consensus        28 V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~---~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~  104 (311)
T 3ork_A           28 VHLARDLRDHRDVAVKVLRADLARDPSFYLRF---RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLR  104 (311)
T ss_dssp             EEEEEETTTTEEEEEEEECTTTTTSHHHHHHH---HHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHH
T ss_pred             EEEEEECCCCceEEEEEeCccccCCHHHHHHH---HHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHH
Confidence            79999999999999999987543333333344   44577788999999999999987654    459999999999999


Q ss_pred             hhhh-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          77 MHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        77 ~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      ++++ .+.+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.+||+|
T Consensus       105 ~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~---dlkp~Ni----------------------l~~~~~~~kl~D  159 (311)
T 3ork_A          105 DIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHR---DVKPANI----------------------MISATNAVKVMD  159 (311)
T ss_dssp             HHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EEETTSCEEECC
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcC---CCCHHHE----------------------EEcCCCCEEEee
Confidence            9985 4679999999999999999999999999999   9999998                      888889999999


Q ss_pred             cCCccCCCCCCC---CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccC-
Q psy3347         156 FGLCKEGMGFGD---RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY-  231 (245)
Q Consensus       156 fg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~-  231 (245)
                      ||++........   ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.+....+...........+ 
T Consensus       160 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~  239 (311)
T 3ork_A          160 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP  239 (311)
T ss_dssp             CSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCH
T ss_pred             ccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCc
Confidence            999875322211   2334568999999999998899999999999999999999999999988877777666554433 


Q ss_pred             ---CCCCChhHHhhhcC
Q psy3347         232 ---PRFLSLEAIAIMRR  245 (245)
Q Consensus       232 ---p~~~~~~~~~li~~  245 (245)
                         +..+++++.++|++
T Consensus       240 ~~~~~~~~~~l~~li~~  256 (311)
T 3ork_A          240 SARHEGLSADLDAVVLK  256 (311)
T ss_dssp             HHHSTTCCHHHHHHHHH
T ss_pred             ccccCCCCHHHHHHHHH
Confidence               35688999888753


No 61 
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=3.7e-39  Score=264.47  Aligned_cols=214  Identities=29%  Similarity=0.562  Sum_probs=183.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+++.||+|++...........+.+   .++++.++.++||||+++++++...+..+++|||+++++|.+++.
T Consensus        30 Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~---~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  106 (284)
T 2vgo_A           30 VYLAREKQNKFIMALKVLFKSQLEKEGVEHQL---RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ  106 (284)
T ss_dssp             EEEEEETTTTEEEEEEEEEHHHHHHTTCHHHH---HHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH
T ss_pred             EEEEEEcCCCcEEEEEEEcccccchHHHHHHH---HHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHH
Confidence            79999999999999999976432222222333   344777889999999999999999999999999999999998885


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       ...+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.++|+|||++
T Consensus       107 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---dl~p~Ni----------------------l~~~~~~~kl~Dfg~~  161 (284)
T 2vgo_A          107 KHGRFDEQRSATFMEELADALHYCHERKVIHR---DIKPENL----------------------LMGYKGELKIADFGWS  161 (284)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHTTTEECC---CCSGGGE----------------------EECTTCCEEECCCTTC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCceec---CCCHHHE----------------------EEcCCCCEEEeccccc
Confidence             4578999999999999999999999999999   9999998                      8888899999999988


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChhH
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA  239 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (245)
                      ......  ......|+..|+|||.+.+..++.++|+||||+++|+|++|+.||...+..+....+......+|..+++++
T Consensus       162 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T 2vgo_A          162 VHAPSL--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGS  239 (284)
T ss_dssp             EECSSS--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHH
T ss_pred             ccCccc--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCCcCCHHH
Confidence            643222  233457889999999999888999999999999999999999999988888888888888888889999999


Q ss_pred             Hhhhc
Q psy3347         240 IAIMR  244 (245)
Q Consensus       240 ~~li~  244 (245)
                      +++|+
T Consensus       240 ~~li~  244 (284)
T 2vgo_A          240 KDLIS  244 (284)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99886


No 62 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=5e-39  Score=275.01  Aligned_cols=213  Identities=28%  Similarity=0.436  Sum_probs=179.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.++.+|+.||+|++....   ......+   .+++++++.++||||+++++++...+..++||||+.+++|.+++.
T Consensus        67 Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~---~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~  140 (387)
T 1kob_A           67 VHRCVEKATGRVFVAKFINTPY---PLDKYTV---KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIA  140 (387)
T ss_dssp             EEEEEETTTCCEEEEEEEECCS---HHHHHHH---HHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTT
T ss_pred             EEEEEECCCCCEEEEEEecccc---hhhHHHH---HHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHH
Confidence            7999999999999999997642   1222333   345778889999999999999999999999999999999999885


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccC--CCCceEEeec
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVND--TEGYVKIADF  156 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~kl~Df  156 (245)
                      .  ..+++..+..++.|++.||+|||++||+||   |+||+||                      +++  .++.+||+||
T Consensus       141 ~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHr---Dlkp~NI----------------------ll~~~~~~~vkL~DF  195 (387)
T 1kob_A          141 AEDYKMSEAEVINYMRQACEGLKHMHEHSIVHL---DIKPENI----------------------MCETKKASSVKIIDF  195 (387)
T ss_dssp             CTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EESSTTCCCEEECCC
T ss_pred             hhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeec---ccchHHe----------------------EEecCCCCceEEEec
Confidence            4  368999999999999999999999999999   8888888                      554  4578999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC----
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP----  232 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p----  232 (245)
                      |+++..... .......||+.|+|||.+.+..++.++|||||||++|+|++|..||.+.+..+....+......++    
T Consensus       196 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  274 (387)
T 1kob_A          196 GLATKLNPD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAF  274 (387)
T ss_dssp             TTCEECCTT-SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTT
T ss_pred             ccceecCCC-cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccc
Confidence            999753222 223345789999999999988899999999999999999999999999888888888877655443    


Q ss_pred             CCCChhHHhhhcC
Q psy3347         233 RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ~~~~~~~~~li~~  245 (245)
                      ..+++++++||++
T Consensus       275 ~~~s~~~~~li~~  287 (387)
T 1kob_A          275 SSVSPEAKDFIKN  287 (387)
T ss_dssp             TTSCHHHHHHHHT
T ss_pred             ccCCHHHHHHHHH
Confidence            5688999999864


No 63 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=5e-39  Score=268.38  Aligned_cols=216  Identities=26%  Similarity=0.429  Sum_probs=181.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchh---hHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARD---EVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~---~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|+++.+|+.||+|++.........   ..+.+.+   +++.++.++||||+++++++...+..++||||+++++|.+
T Consensus        28 V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~---E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  104 (321)
T 2a2a_A           28 VKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER---EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD  104 (321)
T ss_dssp             EEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHH---HHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             EEEEEECCCCeEEEEEEEecccccccccchhHHHHHH---HHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHH
Confidence            799999999999999999865432211   2334444   4677888899999999999999999999999999999999


Q ss_pred             hhhh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCC----ceE
Q psy3347          78 HIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG----YVK  152 (245)
Q Consensus        78 ~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~k  152 (245)
                      ++.. ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++    .++
T Consensus       105 ~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~---dikp~NI----------------------l~~~~~~~~~~~k  159 (321)
T 2a2a_A          105 FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF---DLKPENI----------------------MLLDKNIPIPHIK  159 (321)
T ss_dssp             HHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EESCTTSSSCCEE
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecC---CCChHHE----------------------EEecCCCCcCCEE
Confidence            9864 568999999999999999999999999999   8888888                      666666    799


Q ss_pred             EeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC
Q psy3347         153 IADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP  232 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p  232 (245)
                      |+|||++...... .......|++.|+|||.+.+..++.++||||||+++|+|++|..||.+.+..+....+......++
T Consensus       160 l~Dfg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~  238 (321)
T 2a2a_A          160 LIDFGLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD  238 (321)
T ss_dssp             ECCCTTCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC
T ss_pred             EccCccceecCcc-ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccC
Confidence            9999998754332 223455789999999999988899999999999999999999999999888888888877665544


Q ss_pred             ----CCCChhHHhhhcC
Q psy3347         233 ----RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ----~~~~~~~~~li~~  245 (245)
                          ..+++++++||++
T Consensus       239 ~~~~~~~~~~~~~li~~  255 (321)
T 2a2a_A          239 EEFFSHTSELAKDFIRK  255 (321)
T ss_dssp             HHHHTTCCHHHHHHHHT
T ss_pred             hhhhcccCHHHHHHHHH
Confidence                6788899998864


No 64 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.3e-39  Score=277.17  Aligned_cols=195  Identities=27%  Similarity=0.468  Sum_probs=159.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcC-CCceeeeeEEEeeCC--eEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMR-HPFLVNLFACFQTEA--HVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~-h~ni~~~~~~~~~~~--~~~lv~e~~~~~~L~~   77 (245)
                      ||+|.++.+|+.||+|++.... ......+...   +++..++.+. ||||+++++++...+  ..|+||||++ ++|..
T Consensus        25 V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~---~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~   99 (388)
T 3oz6_A           25 VWKSIDRRTGEVVAVKKIFDAF-QNSTDAQRTF---REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHA   99 (388)
T ss_dssp             EEEEEETTTCCEEEEEEECC---CCHHHHHHHH---HHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHH
T ss_pred             EEEEEECCCCCEEEEEEecccc-cChHHHHHHH---HHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHH
Confidence            7999999999999999997532 2222333333   4466677776 999999999997554  7999999997 58999


Q ss_pred             hhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          78 HIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        78 ~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      +++...+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+|||
T Consensus       100 ~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHr---Dlkp~NI----------------------ll~~~~~~kl~DFG  154 (388)
T 3oz6_A          100 VIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHR---DMKPSNI----------------------LLNAECHVKVADFG  154 (388)
T ss_dssp             HHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EECTTCCEEECCCT
T ss_pred             HHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeC---CCCHHHe----------------------EEcCCCCEEecCCc
Confidence            8888889999999999999999999999999999   9999999                      88899999999999


Q ss_pred             CccCCCCC---------------------CCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q psy3347         158 LCKEGMGF---------------------GDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGD  215 (245)
Q Consensus       158 ~~~~~~~~---------------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~  215 (245)
                      +++.....                     .......+||+.|+|||.+.+ ..++.++|||||||++|+|++|++||.+.
T Consensus       155 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  234 (388)
T 3oz6_A          155 LSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS  234 (388)
T ss_dssp             TCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence            99743221                     112334578999999999977 57899999999999999999999999999


Q ss_pred             CHHHHHHHHh
Q psy3347         216 DEEEVFDSIV  225 (245)
Q Consensus       216 ~~~~~~~~~~  225 (245)
                      +..+....+.
T Consensus       235 ~~~~~~~~i~  244 (388)
T 3oz6_A          235 STMNQLERII  244 (388)
T ss_dssp             SHHHHHHHHH
T ss_pred             CHHHHHHHHH
Confidence            8887777765


No 65 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=4e-39  Score=268.65  Aligned_cols=194  Identities=24%  Similarity=0.448  Sum_probs=162.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|+++...  .....+.+.   +++++++.++||||+++++++..++..++||||+++ +|.+++.
T Consensus        21 V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~---~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~   94 (317)
T 2pmi_A           21 VYKGLNKTTGVYVALKEVKLDS--EEGTPSTAI---REISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMD   94 (317)
T ss_dssp             EEEEECSSSCCEEEEEEEECCS--TTCSCHHHH---HHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCCC-BHHHHHH
T ss_pred             EEEEEECCCCcEEEEEEeeccc--ccccHHHHH---HHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecCC-CHHHHHH
Confidence            7999999999999999997643  111223333   447788899999999999999999999999999985 8888774


Q ss_pred             h-------cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEE
Q psy3347          81 A-------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKI  153 (245)
Q Consensus        81 ~-------~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl  153 (245)
                      .       ..+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~---Dlkp~NI----------------------l~~~~~~~kl  149 (317)
T 2pmi_A           95 SRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHR---DLKPQNL----------------------LINKRGQLKL  149 (317)
T ss_dssp             HHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EECTTCCEEE
T ss_pred             hccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeC---CCChHHe----------------------EEcCCCCEEE
Confidence            3       248899999999999999999999999999   9999999                      8888999999


Q ss_pred             eecCCccCCCCCCCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         154 ADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       154 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      +|||++..............+|..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.
T Consensus       150 ~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  222 (317)
T 2pmi_A          150 GDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF  222 (317)
T ss_dssp             CCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            999998754333333445678999999999976 468999999999999999999999999988877766664


No 66 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=3.4e-39  Score=276.22  Aligned_cols=195  Identities=22%  Similarity=0.340  Sum_probs=161.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++...... ....+.+.   +++.+++.++||||+++++++..++..++||||+++++|.+++.
T Consensus        43 V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~---~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  118 (389)
T 3gni_B           43 VNLARYKPTGEYVTVRRINLEACS-NEMVTFLQ---GELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC  118 (389)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHH---HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHH
T ss_pred             EEEEEEcCCCCEEEEEEecccccC-hHHHHHHH---HHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHh
Confidence            799999999999999999865322 23333443   45777888999999999999999999999999999999999885


Q ss_pred             h---cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          81 A---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        81 ~---~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      .   ..+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+|||
T Consensus       119 ~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHr---Dlkp~NI----------------------ll~~~~~~kl~dfg  173 (389)
T 3gni_B          119 THFMDGMNELAIAYILQGVLKALDYIHHMGYVHR---SVKASHI----------------------LISVDGKVYLSGLR  173 (389)
T ss_dssp             HTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTCCEEECCGG
T ss_pred             hhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecC---CCCHHHE----------------------EEcCCCCEEEcccc
Confidence            4   568999999999999999999999999999   9999999                      88889999999999


Q ss_pred             CccCCCCCC-------CCCCcccCCCCccccccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy3347         158 LCKEGMGFG-------DRTGTFCGTPEFLAPEVLTE--TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI  224 (245)
Q Consensus       158 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~  224 (245)
                      .+.......       ......+|+..|+|||.+.+  ..++.++|||||||++|+|++|+.||.+.+..+....+
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~  249 (389)
T 3gni_B          174 SNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK  249 (389)
T ss_dssp             GCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC
T ss_pred             cceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            875322111       11233478889999999987  57899999999999999999999999876555444433


No 67 
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=1.9e-39  Score=273.51  Aligned_cols=210  Identities=29%  Similarity=0.446  Sum_probs=172.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|+++.+|+.||+|++.......       .+|   ++.+..+ +||||+++++++.+++..|+||||+++|+|.+++
T Consensus        38 V~~~~~~~~~~~~avK~~~~~~~~~-------~~E---~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i  107 (342)
T 2qr7_A           38 CKRCIHKATNMEFAVKIIDKSKRDP-------TEE---IEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKI  107 (342)
T ss_dssp             EEEEEETTTTEEEEEEEEETTTCCC-------HHH---HHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEcccCCh-------HHH---HHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHH
Confidence            7999999999999999998653211       122   3344444 7999999999999999999999999999999888


Q ss_pred             h-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc-CCC---CceEEe
Q psy3347          80 H-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN-DTE---GYVKIA  154 (245)
Q Consensus        80 ~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~kl~  154 (245)
                      . ...+++..+..++.|++.||+|||++||+||   |+||+||                      ++ +.+   +.+||+
T Consensus       108 ~~~~~~~~~~~~~~~~qi~~al~~lH~~givHr---Dlkp~NI----------------------l~~~~~~~~~~~kl~  162 (342)
T 2qr7_A          108 LRQKFFSEREASAVLFTITKTVEYLHAQGVVHR---DLKPSNI----------------------LYVDESGNPESIRIC  162 (342)
T ss_dssp             HTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCCGGGE----------------------EESSSSCSGGGEEEC
T ss_pred             HHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEec---cCCHHHE----------------------EEecCCCCcCeEEEE
Confidence            5 4568999999999999999999999999999   8888888                      43 332   359999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC---CCHHHHHHHHhcCcccC
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPG---DDEEEVFDSIVNDEVRY  231 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~---~~~~~~~~~~~~~~~~~  231 (245)
                      |||++.............+||+.|+|||.+.+..++.++|||||||++|+|++|..||.+   .+..+....+..+...+
T Consensus       163 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~  242 (342)
T 2qr7_A          163 DFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL  242 (342)
T ss_dssp             CCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCC
T ss_pred             ECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCccc
Confidence            999998644444445566889999999999887889999999999999999999999975   45667777777766654


Q ss_pred             C----CCCChhHHhhhcC
Q psy3347         232 P----RFLSLEAIAIMRR  245 (245)
Q Consensus       232 p----~~~~~~~~~li~~  245 (245)
                      +    ..+++++++||++
T Consensus       243 ~~~~~~~~s~~~~~li~~  260 (342)
T 2qr7_A          243 SGGYWNSVSDTAKDLVSK  260 (342)
T ss_dssp             CSTTTTTSCHHHHHHHHH
T ss_pred             CccccccCCHHHHHHHHH
Confidence            4    5689999998863


No 68 
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1.8e-39  Score=285.41  Aligned_cols=215  Identities=28%  Similarity=0.517  Sum_probs=181.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++...........+.+.+|   +++++.++||||+++++++...+..++||||+.+++|.+++.
T Consensus        42 V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E---~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  118 (484)
T 3nyv_A           42 VILCKDKITGQECAVKVISKRQVKQKTDKESLLRE---VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII  118 (484)
T ss_dssp             EEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHH---HHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHH---HHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHH
Confidence            79999999999999999986544333344445444   777889999999999999999999999999999999988874


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc---CCCCceEEeec
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN---DTEGYVKIADF  156 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~kl~Df  156 (245)
                       ...+++..+..++.|++.||.|||++||+||   |+||+||                      ++   +.++.+||+||
T Consensus       119 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~---Dlkp~Ni----------------------l~~~~~~~~~~kl~Df  173 (484)
T 3nyv_A          119 SRKRFSEVDAARIIRQVLSGITYMHKNKIVHR---DLKPENL----------------------LLESKSKDANIRIIDF  173 (484)
T ss_dssp             TCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EESSSSTTCCEEECCT
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeC---CCCHHHE----------------------EEecCCCCCcEEEEee
Confidence             4679999999999999999999999999999   8888888                      55   46788999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC----
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP----  232 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p----  232 (245)
                      |++...... ......+||+.|+|||.+.+ .++.++|||||||++|+|++|..||.+.+..+....+..+...++    
T Consensus       174 g~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  251 (484)
T 3nyv_A          174 GLSTHFEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW  251 (484)
T ss_dssp             THHHHBCCC-CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGG
T ss_pred             eeeEEcccc-cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCccc
Confidence            998753222 22345578999999999966 689999999999999999999999999999999998887765543    


Q ss_pred             CCCChhHHhhhcC
Q psy3347         233 RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ~~~~~~~~~li~~  245 (245)
                      ..+++++++||++
T Consensus       252 ~~~s~~~~~li~~  264 (484)
T 3nyv_A          252 KKVSESAKDLIRK  264 (484)
T ss_dssp             GGSCHHHHHHHHH
T ss_pred             ccCCHHHHHHHHH
Confidence            4688999998863


No 69 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=9.4e-39  Score=263.17  Aligned_cols=196  Identities=20%  Similarity=0.323  Sum_probs=160.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++..... .....+.+   .++++.++.++||||+++++++..++..++||||++++.+..+..
T Consensus        18 V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~---~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~   93 (292)
T 3o0g_A           18 VFKAKNRETHEIVALKRVRLDDD-DEGVPSSA---LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS   93 (292)
T ss_dssp             EEEEEETTTCCEEEEEEEESSCS-STTHHHHH---HHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH
T ss_pred             EEEEEECCCCceEEEEeeeccCC-cCCcchHH---HHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCCCHHHHHHh
Confidence            79999999999999999986542 22222333   345788889999999999999999999999999998744444443


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       .+.+++..+..++.|++.||+|||++|++||   |+||+||                      +++.++.+||+|||++
T Consensus        94 ~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~---dikp~Ni----------------------l~~~~~~~kl~Dfg~~  148 (292)
T 3o0g_A           94 CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHR---DLKPQNL----------------------LINRNGELKLANFGLA  148 (292)
T ss_dssp             TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTSCEEECCCTTC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecC---CCCHHHE----------------------EEcCCCCEEEeecccc
Confidence             4679999999999999999999999999999   9999999                      8888999999999999


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCC-CCcchhHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHh
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETS-YTRAVDWWGLGVLIFEMLVGESP-FPGDDEEEVFDSIV  225 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~~g~~p-f~~~~~~~~~~~~~  225 (245)
                      ..............||..|+|||.+.+.. ++.++|||||||++|+|++|..| |.+.+..+....+.
T Consensus       149 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~  216 (292)
T 3o0g_A          149 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF  216 (292)
T ss_dssp             EECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHH
T ss_pred             eecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHH
Confidence            76443444455667899999999997765 79999999999999999987666 66666666666654


No 70 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=1.7e-38  Score=259.51  Aligned_cols=211  Identities=26%  Similarity=0.469  Sum_probs=178.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.++.+++.+|+|++.....   ...+.+.+   +++.++.++||||+++++++..++..++||||+++++|.+++.
T Consensus        25 V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~---E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   98 (277)
T 3f3z_A           25 VKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQ---EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVV   98 (277)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGC---SCHHHHHH---HHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH
T ss_pred             EEEEEeCCCCcEEEEEeehhhcc---chHHHHHH---HHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHH
Confidence            79999999999999999986432   22334444   4777888999999999999999999999999999999988874


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc---CCCCceEEeec
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN---DTEGYVKIADF  156 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~kl~Df  156 (245)
                       ...+++..+..++.|++.||+|||++|++|+   |++|+||                      ++   +.++.++|+||
T Consensus        99 ~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~---dlkp~Ni----------------------l~~~~~~~~~~~l~Df  153 (277)
T 3f3z_A           99 HKRVFRESDAARIMKDVLSAVAYCHKLNVAHR---DLKPENF----------------------LFLTDSPDSPLKLIDF  153 (277)
T ss_dssp             HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EESSSSTTCCEEECCC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCccCC---CCCHHHE----------------------EEecCCCCCcEEEEec
Confidence             4678999999999999999999999999999   8888888                      55   67889999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCC---
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPR---  233 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~---  233 (245)
                      |++..... ........|++.|+|||.+.+. ++.++||||||+++|+|++|+.||.+.+..+....+..+...+|.   
T Consensus       154 g~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  231 (277)
T 3f3z_A          154 GLAARFKP-GKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDW  231 (277)
T ss_dssp             TTCEECCT-TSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHH
T ss_pred             ccceeccC-ccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhh
Confidence            99875322 2234455789999999998654 889999999999999999999999999888888888887776663   


Q ss_pred             -CCChhHHhhhc
Q psy3347         234 -FLSLEAIAIMR  244 (245)
Q Consensus       234 -~~~~~~~~li~  244 (245)
                       .+++++++||+
T Consensus       232 ~~~~~~~~~li~  243 (277)
T 3f3z_A          232 LNVSPQAESLIR  243 (277)
T ss_dssp             TTSCHHHHHHHH
T ss_pred             hcCCHHHHHHHH
Confidence             68999998886


No 71 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=1.2e-38  Score=270.55  Aligned_cols=212  Identities=31%  Similarity=0.514  Sum_probs=164.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++.......    +.+.   +++..++.++||||+++++++...+..++||||+.+++|.+++.
T Consensus        36 V~~~~~~~~~~~vavK~~~~~~~~~----~~~~---~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  108 (361)
T 3uc3_A           36 ARLMRDKLTKELVAVKYIERGAAID----ENVQ---REIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERIC  108 (361)
T ss_dssp             EEEEEETTTCCEEEEEEEESSTTSC----HHHH---HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH
T ss_pred             EEEEEECCCCcEEEEEEEecCcccc----HHHH---HHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHH
Confidence            7999999999999999998643221    2333   44677888999999999999999999999999999999998884


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCc--eEEeecC
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY--VKIADFG  157 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~kl~Dfg  157 (245)
                       .+.+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.  +||+|||
T Consensus       109 ~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~---Dlkp~Ni----------------------ll~~~~~~~~kl~Dfg  163 (361)
T 3uc3_A          109 NAGRFSEDEARFFFQQLLSGVSYCHSMQICHR---DLKLENT----------------------LLDGSPAPRLKICDFG  163 (361)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSC---CCCGGGE----------------------EECSSSSCCEEECCCC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC---CCCHHHE----------------------EEcCCCCceEEEeecC
Confidence             4679999999999999999999999999999   8889888                      6665554  9999999


Q ss_pred             CccCCCCCCCCCCcccCCCCccccccccCCCCCcc-hhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhcCcccCC
Q psy3347         158 LCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRA-VDWWGLGVLIFEMLVGESPFPGDD----EEEVFDSIVNDEVRYP  232 (245)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~~l~el~~g~~pf~~~~----~~~~~~~~~~~~~~~p  232 (245)
                      +++.... ........||+.|+|||.+.+..++.+ +|||||||++|+|++|+.||.+..    .......+......+|
T Consensus       164 ~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  242 (361)
T 3uc3_A          164 YSKSSVL-HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP  242 (361)
T ss_dssp             CC----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCC
T ss_pred             ccccccc-cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCC
Confidence            9874222 222345578999999999988877655 899999999999999999997643    3455555666555555


Q ss_pred             C--CCChhHHhhhcC
Q psy3347         233 R--FLSLEAIAIMRR  245 (245)
Q Consensus       233 ~--~~~~~~~~li~~  245 (245)
                      .  .+++++++||++
T Consensus       243 ~~~~~s~~~~~li~~  257 (361)
T 3uc3_A          243 DDIRISPECCHLISR  257 (361)
T ss_dssp             TTSCCCHHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHH
Confidence            4  689999998863


No 72 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=2.2e-38  Score=259.68  Aligned_cols=214  Identities=29%  Similarity=0.529  Sum_probs=178.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.++.+|+.||+|++..... .....+.+.   ++++.++.++||||+++++++..++..+++|||+++++|.+.+.
T Consensus        22 V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~---~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~   97 (284)
T 3kk8_A           22 VRRCVHKTTGLEFAAKIINTKKL-SARDFQKLE---REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV   97 (284)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHH---HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             EEEEEEcCCCceEEEEEeecccC-CHHHHHHHH---HHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHH
Confidence            79999999999999999986542 223334444   44777888899999999999999999999999999999987774


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCC---ceEEeec
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG---YVKIADF  156 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~kl~Df  156 (245)
                       ...+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++   .++|+||
T Consensus        98 ~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~---dikp~Ni----------------------l~~~~~~~~~~kl~Df  152 (284)
T 3kk8_A           98 AREFYSEADASHCIQQILESIAYCHSNGIVHR---NLKPENL----------------------LLASKAKGAAVKLADF  152 (284)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCCGGGE----------------------EESSSSTTCCEEECCC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcC---CCCHHHE----------------------EEecCCCCCcEEEeec
Confidence             5678999999999999999999999999999   8888888                      665444   4999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC----
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP----  232 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p----  232 (245)
                      |++..... ........|+..|+|||.+.+..++.++||||||+++|+|++|+.||.+.+..+....+..+...+|    
T Consensus       153 g~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
T 3kk8_A          153 GLAIEVND-SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW  231 (284)
T ss_dssp             TTCEECCS-SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTT
T ss_pred             eeeEEccc-CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhh
Confidence            99875332 2223456789999999999988899999999999999999999999999988888888877665544    


Q ss_pred             CCCChhHHhhhc
Q psy3347         233 RFLSLEAIAIMR  244 (245)
Q Consensus       233 ~~~~~~~~~li~  244 (245)
                      ..+++++++||+
T Consensus       232 ~~~~~~~~~li~  243 (284)
T 3kk8_A          232 DTVTPEAKSLID  243 (284)
T ss_dssp             TTSCHHHHHHHH
T ss_pred             cccCHHHHHHHH
Confidence            467889988875


No 73 
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=9.3e-39  Score=260.84  Aligned_cols=215  Identities=28%  Similarity=0.497  Sum_probs=174.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|++...........+.+.   ++++.++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        27 V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~---~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  103 (276)
T 2h6d_A           27 VKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK---REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC  103 (276)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHH---HHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH
T ss_pred             EEEEEECCCCceEEEEEeccccccchhHHHHHH---HHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHh
Confidence            799999999999999999764322222233443   44777888999999999999999999999999999999999885


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       ...+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||++
T Consensus       104 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---dl~p~Ni----------------------l~~~~~~~~l~dfg~~  158 (276)
T 2h6d_A          104 KHGRVEEMEARRLFQQILSAVDYCHRHMVVHR---DLKPENV----------------------LLDAHMNAKIADFGLS  158 (276)
T ss_dssp             HHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCC---CCCGGGE----------------------EECTTSCEEECCCCGG
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHCCCccC---CCChhhE----------------------EECCCCCEEEeecccc
Confidence             4578999999999999999999999999999   9999898                      8888999999999998


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChh
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLE  238 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (245)
                      ..... ........++..|+|||.+.+..+ +.++|+||||+++|+|++|+.||.+....+....+......+|..++++
T Consensus       159 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (276)
T 2h6d_A          159 NMMSD-GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRS  237 (276)
T ss_dssp             GCCCC--------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHH
T ss_pred             cccCC-CcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchhcCHH
Confidence            75322 222334568889999999987765 6899999999999999999999998888888888887777788889999


Q ss_pred             HHhhhc
Q psy3347         239 AIAIMR  244 (245)
Q Consensus       239 ~~~li~  244 (245)
                      +.++|+
T Consensus       238 l~~li~  243 (276)
T 2h6d_A          238 VATLLM  243 (276)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998875


No 74 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=7.6e-39  Score=272.52  Aligned_cols=214  Identities=26%  Similarity=0.462  Sum_probs=176.5

Q ss_pred             CEeEEEe-------cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccC
Q psy3347           1 VILSQYR-------NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAG   72 (245)
Q Consensus         1 V~~a~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~   72 (245)
                      ||+|++.       .++..||+|+++...  .....+.+.+|   +++++.+ +||||+++++++...+..|+||||+++
T Consensus        97 Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E---~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~  171 (370)
T 2psq_A           97 VVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSE---MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK  171 (370)
T ss_dssp             EEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHH---HHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             EEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHH---HHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCC
Confidence            7899875       356689999998642  23334444444   6677788 899999999999999999999999999


Q ss_pred             Cchhhhhhhc-----------------CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccC
Q psy3347          73 GDLMMHIHAD-----------------VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVN  135 (245)
Q Consensus        73 ~~L~~~~~~~-----------------~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~  135 (245)
                      |+|.+++...                 .+++..+..++.|++.||+|||++||+||   |+||+||              
T Consensus       172 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr---Dlkp~NI--------------  234 (370)
T 2psq_A          172 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR---DLAARNV--------------  234 (370)
T ss_dssp             CBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCCGGGE--------------
T ss_pred             CCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeecc---ccchhhE--------------
Confidence            9999998542                 37888999999999999999999999999   9999999              


Q ss_pred             cccchhccccCCCCceEEeecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q psy3347         136 SSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPF  212 (245)
Q Consensus       136 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf  212 (245)
                              +++.++.+||+|||+++.......  ......+++.|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus       235 --------ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~  306 (370)
T 2psq_A          235 --------LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY  306 (370)
T ss_dssp             --------EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             --------EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCC
Confidence                    888899999999999975332221  2233456778999999998899999999999999999999 99999


Q ss_pred             CCCCHHHHHHHHhcCc-ccCCCCCChhHHhhhc
Q psy3347         213 PGDDEEEVFDSIVNDE-VRYPRFLSLEAIAIMR  244 (245)
Q Consensus       213 ~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~  244 (245)
                      .+.+..+....+..+. ...|..+++++.++|+
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  339 (370)
T 2psq_A          307 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMR  339 (370)
T ss_dssp             TTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHH
T ss_pred             CCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence            9888887777776654 3567889999999886


No 75 
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=2.3e-38  Score=262.08  Aligned_cols=214  Identities=24%  Similarity=0.421  Sum_probs=182.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|++.....  ....+.+.+   ++..++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        38 V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~---e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  112 (303)
T 3a7i_A           38 VFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQ---EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE  112 (303)
T ss_dssp             EEEEEETTTCCEEEEEEEETTTC--STTHHHHHH---HHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHT
T ss_pred             EEEEEECCCCcEEEEEEeccccc--HHHHHHHHH---HHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHh
Confidence            79999999999999999976532  223344444   4677888899999999999999999999999999999999998


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCcc
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK  160 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~  160 (245)
                      .+.+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.++|+|||++.
T Consensus       113 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---dl~p~Ni----------------------l~~~~~~~kl~Dfg~~~  167 (303)
T 3a7i_A          113 PGPLDETQIATILREILKGLDYLHSEKKIHR---DIKAANV----------------------LLSEHGEVKLADFGVAG  167 (303)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTSCEEECCCTTCE
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCccC---CCChheE----------------------EECCCCCEEEeecccce
Confidence            8889999999999999999999999999999   8999888                      88889999999999987


Q ss_pred             CCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcc-cCCCCCChhH
Q psy3347         161 EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEV-RYPRFLSLEA  239 (245)
Q Consensus       161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~  239 (245)
                      .............|+..|+|||.+.+..++.++||||||+++|+|++|+.||......+....+..... ..+..+++++
T Consensus       168 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  247 (303)
T 3a7i_A          168 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPL  247 (303)
T ss_dssp             ECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHH
T ss_pred             ecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHH
Confidence            543333334456788999999999888899999999999999999999999998887777766655433 4567889999


Q ss_pred             Hhhhc
Q psy3347         240 IAIMR  244 (245)
Q Consensus       240 ~~li~  244 (245)
                      .+||+
T Consensus       248 ~~li~  252 (303)
T 3a7i_A          248 KEFVE  252 (303)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88875


No 76 
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=2.1e-38  Score=267.74  Aligned_cols=211  Identities=24%  Similarity=0.386  Sum_probs=174.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||||++...........+.+.   ++++.++.++||||+++++++..++..++||||+.| +|.+++.
T Consensus        70 Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~---~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~g-~l~~~l~  145 (348)
T 1u5q_A           70 VYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII---KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLE  145 (348)
T ss_dssp             EEEEEETTTTEEEEEEEEESCSSCHHHHHHHHH---HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHH
T ss_pred             EEEEEEccCCeEEEEEEEccccccchHHHHHHH---HHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCCC-CHHHHHH
Confidence            799999999999999999865433333334444   447778888999999999999999999999999974 7776663


Q ss_pred             --hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 --ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 --~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                        ...+++..+..++.|++.||+|||++|++||   |+||+||                      +++.++.+||+|||+
T Consensus       146 ~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~kL~DfG~  200 (348)
T 1u5q_A          146 VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR---DVKAGNI----------------------LLSEPGLVKLGDFGS  200 (348)
T ss_dssp             HHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCC---CCSGGGE----------------------EEETTTEEEECCCTT
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeC---CCCHHHE----------------------EECCCCCEEEeeccC
Confidence              4578999999999999999999999999999   9999998                      888889999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCcccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCccc--CCC
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLT---ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR--YPR  233 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~p~  233 (245)
                      +.....    .....|++.|+|||.+.   ...++.++|||||||++|+|++|+.||.+.+..+....+.....+  .+.
T Consensus       201 a~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  276 (348)
T 1u5q_A          201 ASIMAP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSG  276 (348)
T ss_dssp             CBSSSS----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCT
T ss_pred             ceecCC----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCC
Confidence            875322    23457899999999985   467889999999999999999999999988877777666655433  346


Q ss_pred             CCChhHHhhhc
Q psy3347         234 FLSLEAIAIMR  244 (245)
Q Consensus       234 ~~~~~~~~li~  244 (245)
                      .+++++++||+
T Consensus       277 ~~~~~l~~li~  287 (348)
T 1u5q_A          277 HWSEYFRNFVD  287 (348)
T ss_dssp             TSCHHHHHHHH
T ss_pred             CCCHHHHHHHH
Confidence            78888888875


No 77 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=1.2e-38  Score=264.53  Aligned_cols=199  Identities=25%  Similarity=0.370  Sum_probs=165.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccc--hhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC-----eEEEEEeeccCC
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIA--RDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA-----HVCFVMEYAAGG   73 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~-----~~~lv~e~~~~~   73 (245)
                      ||+|+++.+|+.||+|++.......  ........+|.+++..++.++||||+++++++....     ..+++||++.+ 
T Consensus        25 V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-  103 (308)
T 3g33_A           25 VYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-  103 (308)
T ss_dssp             EEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCCC-
T ss_pred             EEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhhc-
Confidence            7999999999999999997543211  111234556666677777778999999999997754     68999999974 


Q ss_pred             chhhhhhhc---CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCc
Q psy3347          74 DLMMHIHAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY  150 (245)
Q Consensus        74 ~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (245)
                      +|.+++...   .+++..+..++.|++.||+|||++|++|+   |+||+||                      +++.++.
T Consensus       104 ~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~---Dlkp~Ni----------------------l~~~~~~  158 (308)
T 3g33_A          104 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHR---DLKPENI----------------------LVTSGGT  158 (308)
T ss_dssp             BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCTTTE----------------------EECTTSC
T ss_pred             CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccC---CCCHHHE----------------------EEcCCCC
Confidence            998888643   38999999999999999999999999999   9999898                      8888999


Q ss_pred             eEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q psy3347         151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN  226 (245)
Q Consensus       151 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~  226 (245)
                      +||+|||+++... .........||+.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+..+....+..
T Consensus       159 ~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~  233 (308)
T 3g33_A          159 VKLADFGLARIYS-YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD  233 (308)
T ss_dssp             EEECSCSCTTTST-TCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHH
T ss_pred             EEEeeCccccccC-CCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            9999999987532 22334456789999999999988999999999999999999999999999888877777653


No 78 
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=2e-38  Score=280.04  Aligned_cols=215  Identities=27%  Similarity=0.464  Sum_probs=178.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccch----------hhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeec
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIAR----------DEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYA   70 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~   70 (245)
                      ||+|+++.+++.||+|++........          ...+.+   .+++++++.++||||+++++++...+..++||||+
T Consensus        52 V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~---~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~  128 (504)
T 3q5i_A           52 VLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI---YNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFY  128 (504)
T ss_dssp             EEEEEETTTCCEEEEEEEEC----------------CTHHHH---HHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHH---HHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecC
Confidence            79999999999999999986542211          112233   44577888999999999999999999999999999


Q ss_pred             cCCchhhhhh-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCC
Q psy3347          71 AGGDLMMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG  149 (245)
Q Consensus        71 ~~~~L~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (245)
                      ++++|.+++. ...+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++
T Consensus       129 ~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~---Dlkp~Ni----------------------l~~~~~  183 (504)
T 3q5i_A          129 EGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHR---DIKPENI----------------------LLENKN  183 (504)
T ss_dssp             TTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EESSTT
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC---CCcHHHE----------------------EEecCC
Confidence            9999988774 5679999999999999999999999999999   8888888                      565554


Q ss_pred             ---ceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q psy3347         150 ---YVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN  226 (245)
Q Consensus       150 ---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~  226 (245)
                         .+||+|||++...... ......+||+.|+|||.+. ..++.++|||||||++|+|++|..||.+.+..+....+..
T Consensus       184 ~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~  261 (504)
T 3q5i_A          184 SLLNIKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK  261 (504)
T ss_dssp             CCSSEEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCccEEEEECCCCEEcCCC-CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence               6999999999754322 2344567899999999986 4689999999999999999999999999999999999888


Q ss_pred             CcccCC----CCCChhHHhhhcC
Q psy3347         227 DEVRYP----RFLSLEAIAIMRR  245 (245)
Q Consensus       227 ~~~~~p----~~~~~~~~~li~~  245 (245)
                      +...++    ..+++++++||++
T Consensus       262 ~~~~~~~~~~~~~s~~~~~li~~  284 (504)
T 3q5i_A          262 GKYYFDFNDWKNISDEAKELIKL  284 (504)
T ss_dssp             CCCCCCHHHHTTSCHHHHHHHHH
T ss_pred             CCCCCCccccCCCCHHHHHHHHH
Confidence            776554    6789999998863


No 79 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=1.5e-38  Score=273.39  Aligned_cols=208  Identities=28%  Similarity=0.482  Sum_probs=162.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHH-hhcCCCceeeeeEEEee----CCeEEEEEeeccCCch
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVA-NTMRHPFLVNLFACFQT----EAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~h~ni~~~~~~~~~----~~~~~lv~e~~~~~~L   75 (245)
                      ||+|+++.+|+.||||++...        ....+|   ++.+ +..+||||++++++|..    .++.|+||||+++|+|
T Consensus        78 V~~~~~~~~~~~vAiK~~~~~--------~~~~~E---~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L  146 (400)
T 1nxk_A           78 VLQIFNKRTQEKFALKMLQDC--------PKARRE---VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGEL  146 (400)
T ss_dssp             EEEEEETTTCCEEEEEEEECS--------HHHHHH---HHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEH
T ss_pred             EEEEEECCCCCEEEEEEeCcc--------hhHHHH---HHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcH
Confidence            799999999999999999742        122333   3333 45589999999999876    5679999999999999


Q ss_pred             hhhhhhc---CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC---CC
Q psy3347          76 MMHIHAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT---EG  149 (245)
Q Consensus        76 ~~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~---~~  149 (245)
                      .+++...   .+++..+..++.|++.||.|||++||+||   |+||+||                      +++.   ++
T Consensus       147 ~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr---Dlkp~Ni----------------------ll~~~~~~~  201 (400)
T 1nxk_A          147 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR---DVKPENL----------------------LYTSKRPNA  201 (400)
T ss_dssp             HHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EESSSSTTC
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---CcCcceE----------------------EEecCCCCc
Confidence            9998642   58999999999999999999999999999   8888888                      6665   78


Q ss_pred             ceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHh
Q psy3347         150 YVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE----EVFDSIV  225 (245)
Q Consensus       150 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~----~~~~~~~  225 (245)
                      .+||+|||+++..... ......+||..|+|||.+.+..++.++|||||||++|+|++|+.||.+....    .....+.
T Consensus       202 ~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~  280 (400)
T 1nxk_A          202 ILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR  280 (400)
T ss_dssp             CEEECCCTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH
T ss_pred             cEEEEecccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH
Confidence            8999999999753322 2234567899999999998889999999999999999999999999765432    2344455


Q ss_pred             cCcccCC----CCCChhHHhhhcC
Q psy3347         226 NDEVRYP----RFLSLEAIAIMRR  245 (245)
Q Consensus       226 ~~~~~~p----~~~~~~~~~li~~  245 (245)
                      .+...+|    ..+++++++||++
T Consensus       281 ~~~~~~~~~~~~~~s~~~~~li~~  304 (400)
T 1nxk_A          281 MGQYEFPNPEWSEVSEEVKMLIRN  304 (400)
T ss_dssp             HTCCCCCTTTTTTSCHHHHHHHHT
T ss_pred             cCcccCCCcccccCCHHHHHHHHH
Confidence            5555444    5689999999874


No 80 
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1.3e-38  Score=280.04  Aligned_cols=214  Identities=28%  Similarity=0.494  Sum_probs=176.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh-
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI-   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~-   79 (245)
                      ||+|+++.+|+.||+|++....... .....+.   +++++++.++||||+++++++...+..++||||+.+++|.+.+ 
T Consensus        38 V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~---~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  113 (486)
T 3mwu_A           38 VLKCKDRITQQEYAVKVINKASAKN-KDTSTIL---REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII  113 (486)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHBC-SCHHHHH---HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEecccccc-hHHHHHH---HHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHH
Confidence            7999999999999999997543221 2233444   4477788899999999999999999999999999999998877 


Q ss_pred             hhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc---CCCCceEEeec
Q psy3347          80 HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN---DTEGYVKIADF  156 (245)
Q Consensus        80 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~kl~Df  156 (245)
                      ....+++..+..++.|++.||.|||++||+||   |+||+||                      ++   +.++.+||+||
T Consensus       114 ~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~---Dlkp~Ni----------------------l~~~~~~~~~~kl~Df  168 (486)
T 3mwu_A          114 KRKRFSEHDAARIIKQVFSGITYMHKHNIVHR---DLKPENI----------------------LLESKEKDCDIKIIDF  168 (486)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE----------------------EESSSSTTCCEEECSC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec---cCchHHE----------------------EEecCCCCCCEEEEEC
Confidence            45679999999999999999999999999999   8888888                      55   34567999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC----
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP----  232 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p----  232 (245)
                      |++...... ......+||+.|+|||.+.+ .++.++|||||||++|+|++|..||.+.+..+....+..+...++    
T Consensus       169 g~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  246 (486)
T 3mwu_A          169 GLSTCFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW  246 (486)
T ss_dssp             SCTTTBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGG
T ss_pred             CcCeECCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccc
Confidence            998753222 23445678999999999975 589999999999999999999999999999999888887765543    


Q ss_pred             CCCChhHHhhhcC
Q psy3347         233 RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ~~~~~~~~~li~~  245 (245)
                      ..+++++++||++
T Consensus       247 ~~~s~~~~~li~~  259 (486)
T 3mwu_A          247 RTISDDAKDLIRK  259 (486)
T ss_dssp             GGSCHHHHHHHHH
T ss_pred             CCCCHHHHHHHHH
Confidence            4688999998863


No 81 
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=3.2e-38  Score=258.56  Aligned_cols=216  Identities=26%  Similarity=0.470  Sum_probs=176.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchh---hHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARD---EVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~---~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|+++.+|+.||+|+++........   ..+.+.+   +++.++.++||||+++++++...+..++||||+++++|.+
T Consensus        21 V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~---E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   97 (283)
T 3bhy_A           21 VRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER---EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD   97 (283)
T ss_dssp             EEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHH---HHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred             EEEEEEcCCCCeeehHHhhhccccccccchHHHHHHH---HHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHH
Confidence            799999999999999999865432221   2334444   4677888899999999999999999999999999999999


Q ss_pred             hhh-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCC----ceE
Q psy3347          78 HIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG----YVK  152 (245)
Q Consensus        78 ~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~k  152 (245)
                      ++. ...+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++    .++
T Consensus        98 ~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~---dl~p~Ni----------------------l~~~~~~~~~~~k  152 (283)
T 3bhy_A           98 FLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHF---DLKPENI----------------------MLLDKNVPNPRIK  152 (283)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EESCSSSSSCCEE
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCC---CCChHHE----------------------EEecCCCCCCceE
Confidence            885 4679999999999999999999999999999   8888888                      665555    799


Q ss_pred             EeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC
Q psy3347         153 IADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP  232 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p  232 (245)
                      |+|||++...... .......++..|+|||.+.+..++.++||||||+++|+|++|+.||.+.+..+....+......++
T Consensus       153 l~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  231 (283)
T 3bhy_A          153 LIDFGIAHKIEAG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD  231 (283)
T ss_dssp             ECCCTTCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC
T ss_pred             EEecccceeccCC-CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCc
Confidence            9999998753222 223345688899999999888899999999999999999999999999888888777766554443


Q ss_pred             ----CCCChhHHhhhcC
Q psy3347         233 ----RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ----~~~~~~~~~li~~  245 (245)
                          ..+++++++||++
T Consensus       232 ~~~~~~~~~~~~~li~~  248 (283)
T 3bhy_A          232 EEYFSNTSELAKDFIRR  248 (283)
T ss_dssp             HHHHTTCCHHHHHHHHT
T ss_pred             chhcccCCHHHHHHHHH
Confidence                6788888888864


No 82 
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1e-38  Score=271.46  Aligned_cols=192  Identities=27%  Similarity=0.448  Sum_probs=162.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC------eEEEEEeeccCCc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA------HVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~------~~~lv~e~~~~~~   74 (245)
                      ||+|.+..+|+.||||++.... ......+.+   .+++++++.++||||+++++++...+      .+|+||||+ +++
T Consensus        41 V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~---~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~  115 (367)
T 1cm8_A           41 VCSAVDGRTGAKVAIKKLYRPF-QSELFAKRA---YRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTD  115 (367)
T ss_dssp             EEEEEETTTCCEEEEEECSSTT-SSHHHHHHH---HHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEE
T ss_pred             EEEEEECCCCCEEEEEEeCccc-cCHHHHHHH---HHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCC
Confidence            7999999999999999997542 122222333   45577888899999999999997653      469999999 779


Q ss_pred             hhhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          75 LMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        75 L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      |.++++...+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+
T Consensus       116 L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~kl~  170 (367)
T 1cm8_A          116 LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHR---DLKPGNL----------------------AVNEDCELKIL  170 (367)
T ss_dssp             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EECTTCCEEEC
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---CcCHHHE----------------------EEcCCCCEEEE
Confidence            9999988889999999999999999999999999999   9999999                      88889999999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      |||+++....   .....++|..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.
T Consensus       171 Dfg~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~  239 (367)
T 1cm8_A          171 DFGLARQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM  239 (367)
T ss_dssp             CCTTCEECCS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             eeeccccccc---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            9999975322   2345678999999999977 678999999999999999999999999988777666654


No 83 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=1e-38  Score=267.21  Aligned_cols=214  Identities=24%  Similarity=0.346  Sum_probs=176.3

Q ss_pred             CEeEEEecCCc---EEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNTGE---YFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|++..+|+   .||||+++...  .....+.+.+   ++++++.++||||+++++++..++..++||||+++++|.+
T Consensus        65 V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~---E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  139 (325)
T 3kul_A           65 VCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLS---EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT  139 (325)
T ss_dssp             EEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHH---HHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHH
T ss_pred             EEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHH---HHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHH
Confidence            79999986655   49999998542  2233344444   4778889999999999999999999999999999999999


Q ss_pred             hhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          78 HIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        78 ~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      +++.  ..+++..+..++.|++.||.|||++||+||   |+||+||                      +++.++.++|+|
T Consensus       140 ~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~kl~D  194 (325)
T 3kul_A          140 FLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHR---DLAARNV----------------------LVDSNLVCKVSD  194 (325)
T ss_dssp             HHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECTTCCEEECC
T ss_pred             HHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCC---CCCcceE----------------------EECCCCCEEECC
Confidence            9853  478999999999999999999999999999   9999998                      888899999999


Q ss_pred             cCCccCCCCCCCC---CCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-ccc
Q psy3347         156 FGLCKEGMGFGDR---TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND-EVR  230 (245)
Q Consensus       156 fg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~-~~~  230 (245)
                      ||+++........   .....+|..|+|||.+.+..++.++||||||+++|+|++ |..||.+....+....+..+ ..+
T Consensus       195 fg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~  274 (325)
T 3kul_A          195 FGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP  274 (325)
T ss_dssp             CSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC
T ss_pred             CCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCC
Confidence            9999754332221   122334668999999988889999999999999999999 99999999888888887765 345


Q ss_pred             CCCCCChhHHhhhc
Q psy3347         231 YPRFLSLEAIAIMR  244 (245)
Q Consensus       231 ~p~~~~~~~~~li~  244 (245)
                      .|..+++++.+||+
T Consensus       275 ~~~~~~~~l~~li~  288 (325)
T 3kul_A          275 APMGCPHALHQLML  288 (325)
T ss_dssp             CCTTCCHHHHHHHH
T ss_pred             CCCCcCHHHHHHHH
Confidence            67889999999885


No 84 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=1.5e-38  Score=268.70  Aligned_cols=211  Identities=30%  Similarity=0.494  Sum_probs=162.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+++.||+|+++...     ..+.+.   ++++.++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        69 Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~---~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  140 (349)
T 2w4o_A           69 VYRCKQKGTQKPYALKVLKKTV-----DKKIVR---TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIV  140 (349)
T ss_dssp             EEEEEETTTCCEEEEEEEEC------------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHT
T ss_pred             EEEEEECCCCcEEEEEEeccch-----hHHHHH---HHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHH
Confidence            7999999999999999998542     122333   34677788899999999999999999999999999999998885


Q ss_pred             h-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC---CCceEEeec
Q psy3347          81 A-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT---EGYVKIADF  156 (245)
Q Consensus        81 ~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~kl~Df  156 (245)
                      . ..+++..+..++.|++.||.|||++|++||   |++|+||                      +++.   ++.+||+||
T Consensus       141 ~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~---Dikp~NI----------------------ll~~~~~~~~~kl~Df  195 (349)
T 2w4o_A          141 EKGYYSERDAADAVKQILEAVAYLHENGIVHR---DLKPENL----------------------LYATPAPDAPLKIADF  195 (349)
T ss_dssp             TCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EESSSSTTCCEEECCC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec---CCCcccE----------------------EEecCCCCCCEEEccC
Confidence            4 568999999999999999999999999999   8888888                      5543   789999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcCcccCC---
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE-EVFDSIVNDEVRYP---  232 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~-~~~~~~~~~~~~~p---  232 (245)
                      |+++.... ........|++.|+|||.+.+..++.++|||||||++|+|++|+.||.+.... .....+......++   
T Consensus       196 g~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~  274 (349)
T 2w4o_A          196 GLSKIVEH-QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPW  274 (349)
T ss_dssp             C-----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTT
T ss_pred             ccccccCc-ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCch
Confidence            99875322 22234567899999999999888999999999999999999999999765544 35566666554332   


Q ss_pred             -CCCChhHHhhhcC
Q psy3347         233 -RFLSLEAIAIMRR  245 (245)
Q Consensus       233 -~~~~~~~~~li~~  245 (245)
                       ..+++++++||++
T Consensus       275 ~~~~~~~~~~li~~  288 (349)
T 2w4o_A          275 WDEVSLNAKDLVRK  288 (349)
T ss_dssp             TTTSCHHHHHHHHT
T ss_pred             hhhCCHHHHHHHHH
Confidence             5688899998864


No 85 
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=2.9e-38  Score=278.43  Aligned_cols=214  Identities=28%  Similarity=0.505  Sum_probs=177.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh-
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI-   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~-   79 (245)
                      ||+|+++.+|+.||+|++....... .....+.   +++.+++.++||||++++++|...+..++||||+.+++|.+.+ 
T Consensus        53 V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~---~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~  128 (494)
T 3lij_A           53 VLLCRDKVTHVERAIKIIRKTSVST-SSNSKLL---EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEII  128 (494)
T ss_dssp             EEEEEETTTCCEEEEEEEEC------CTTHHHH---HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH
T ss_pred             EEEEEECCCCcEEEEEEEeccccCc-hHHHHHH---HHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHH
Confidence            7999999999999999998654222 1223343   4477888999999999999999999999999999999998877 


Q ss_pred             hhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC---CCceEEeec
Q psy3347          80 HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT---EGYVKIADF  156 (245)
Q Consensus        80 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~kl~Df  156 (245)
                      +...+++..+..++.|++.||+|||++||+||   |+||+||                      +++.   ++.+||+||
T Consensus       129 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~---Dlkp~Ni----------------------l~~~~~~~~~~kl~Df  183 (494)
T 3lij_A          129 HRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHR---DLKPENL----------------------LLESKEKDALIKIVDF  183 (494)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EESCSSTTCCEEECCC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCceec---cCChhhE----------------------EEeCCCCCCcEEEEEC
Confidence            45679999999999999999999999999999   8888888                      5544   456999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC----
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP----  232 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p----  232 (245)
                      |++...... ......+||+.|+|||.+. ..++.++|||||||++|+|++|..||.+.+..+....+..+...++    
T Consensus       184 G~a~~~~~~-~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  261 (494)
T 3lij_A          184 GLSAVFENQ-KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEW  261 (494)
T ss_dssp             TTCEECBTT-BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGG
T ss_pred             CCCeECCCC-ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhc
Confidence            998754322 2344567999999999985 4689999999999999999999999999999999998887766543    


Q ss_pred             CCCChhHHhhhcC
Q psy3347         233 RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ~~~~~~~~~li~~  245 (245)
                      ..+++++++||++
T Consensus       262 ~~~s~~~~~li~~  274 (494)
T 3lij_A          262 KNVSEGAKDLIKQ  274 (494)
T ss_dssp             TTSCHHHHHHHHH
T ss_pred             ccCCHHHHHHHHH
Confidence            4688999998863


No 86 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=4.1e-39  Score=274.81  Aligned_cols=215  Identities=20%  Similarity=0.358  Sum_probs=177.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|+++...  .....+.+   .+++++++.++||||+++++++..++..++||||+++++|.++++
T Consensus       130 V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~---~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  204 (377)
T 3cbl_A          130 VFSGRLRADNTLVAVKSCRETL--PPDLKAKF---LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR  204 (377)
T ss_dssp             EEEEEETTTCCEEEEEECCTTS--CHHHHTTT---THHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHH
T ss_pred             EEEEEEecCCeEEEEEEccccC--CHHHHHHH---HHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHH
Confidence            7999999999999999997542  22222333   345778889999999999999999999999999999999999985


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  ..+++..+..++.|++.||+|||++|++||   |++|+||                      +++.++.+||+|||+
T Consensus       205 ~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHr---Dlkp~Ni----------------------l~~~~~~~kl~DfG~  259 (377)
T 3cbl_A          205 TEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR---DLAARNC----------------------LVTEKNVLKISDFGM  259 (377)
T ss_dssp             HHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECTTCCEEECCGGG
T ss_pred             hcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCc---ccCHHHE----------------------EEcCCCcEEECcCCC
Confidence            4  358999999999999999999999999999   9999998                      888899999999999


Q ss_pred             ccCCCCCCCC--CCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-ccCCCC
Q psy3347         159 CKEGMGFGDR--TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VRYPRF  234 (245)
Q Consensus       159 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~p~~  234 (245)
                      ++........  .....++..|+|||.+.+..++.++||||||+++|||++ |..||.+.+..+....+..+. .+.|..
T Consensus       260 s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  339 (377)
T 3cbl_A          260 SREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPEL  339 (377)
T ss_dssp             CEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTT
T ss_pred             ceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence            8753221111  112234567999999988889999999999999999998 999999988888877776553 456788


Q ss_pred             CChhHHhhhcC
Q psy3347         235 LSLEAIAIMRR  245 (245)
Q Consensus       235 ~~~~~~~li~~  245 (245)
                      +++++.+||++
T Consensus       340 ~~~~l~~li~~  350 (377)
T 3cbl_A          340 CPDAVFRLMEQ  350 (377)
T ss_dssp             CCHHHHHHHHH
T ss_pred             CCHHHHHHHHH
Confidence            99999998863


No 87 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=9.2e-39  Score=268.59  Aligned_cols=215  Identities=25%  Similarity=0.400  Sum_probs=177.9

Q ss_pred             CEeEEEe-----cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCch
Q psy3347           1 VILSQYR-----NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L   75 (245)
                      ||+|++.     .+++.||+|+++...  .....+.+.   ++++.++.++||||+++++++..++..++||||+++++|
T Consensus        63 Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~---~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L  137 (343)
T 1luf_A           63 VFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQ---REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL  137 (343)
T ss_dssp             EEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHH---HHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred             EEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHH---HHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcH
Confidence            7999987     456899999998642  222333444   447778889999999999999999999999999999999


Q ss_pred             hhhhhh-------------------------cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhh
Q psy3347          76 MMHIHA-------------------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE  130 (245)
Q Consensus        76 ~~~~~~-------------------------~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~  130 (245)
                      .+++..                         ..+++..+..++.|++.||.|||++|++|+   |++|+||         
T Consensus       138 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~---Dlkp~NI---------  205 (343)
T 1luf_A          138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR---DLATRNC---------  205 (343)
T ss_dssp             HHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE---------
T ss_pred             HHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecC---CCCcceE---------
Confidence            999864                         468899999999999999999999999999   9999888         


Q ss_pred             ccccCcccchhccccCCCCceEEeecCCccCCCCCC--CCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-
Q psy3347         131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFG--DRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-  207 (245)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-  207 (245)
                                   +++.++.+||+|||++.......  .......++..|+|||.+.+..++.++||||||+++|+|++ 
T Consensus       206 -------------l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~  272 (343)
T 1luf_A          206 -------------LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY  272 (343)
T ss_dssp             -------------EECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             -------------EECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhc
Confidence                         78888999999999986432111  12234466888999999988889999999999999999999 


Q ss_pred             CCCCCCCCCHHHHHHHHhcCcc-cCCCCCChhHHhhhcC
Q psy3347         208 GESPFPGDDEEEVFDSIVNDEV-RYPRFLSLEAIAIMRR  245 (245)
Q Consensus       208 g~~pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~  245 (245)
                      |..||.+.+..+....+..+.. ..|..+++++.+||++
T Consensus       273 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  311 (343)
T 1luf_A          273 GLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRL  311 (343)
T ss_dssp             TCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             CCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHH
Confidence            9999999888888888776654 4678899999998863


No 88 
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=5.4e-38  Score=260.04  Aligned_cols=211  Identities=31%  Similarity=0.550  Sum_probs=176.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|+++.....   ..+.+.   ++++.++.++||||+++++++...+..+++|||+++++|.+++.
T Consensus        25 V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~---~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   98 (304)
T 2jam_A           25 VFLVKQRLTGKLFALKCIKKSPAF---RDSSLE---NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRIL   98 (304)
T ss_dssp             EEEEEETTTCCEEEEEEEECC---------HHH---HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEeccccc---chHHHH---HHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHH
Confidence            799999999999999999864321   122333   44677888899999999999999999999999999999988874


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc---CCCCceEEeec
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN---DTEGYVKIADF  156 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~kl~Df  156 (245)
                       .+.+++..+..++.|++.||+|||++|++|+   |++|+||                      ++   +.++.++|+||
T Consensus        99 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---dikp~NI----------------------l~~~~~~~~~~kl~Df  153 (304)
T 2jam_A           99 ERGVYTEKDASLVIQQVLSAVKYLHENGIVHR---DLKPENL----------------------LYLTPEENSKIMITDF  153 (304)
T ss_dssp             HHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCC---SCCGGGC----------------------EESSSSTTCCEEBCSC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---CCCHHHE----------------------EEecCCCCCCEEEccC
Confidence             5678999999999999999999999999999   8888888                      55   67889999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccC----C
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY----P  232 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~----p  232 (245)
                      |++.....  .......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.+.+..+....+..+...+    +
T Consensus       154 g~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  231 (304)
T 2jam_A          154 GLSKMEQN--GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFW  231 (304)
T ss_dssp             STTCCCCC--BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTT
T ss_pred             CcceecCC--CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCcccc
Confidence            99874322  22344568999999999998889999999999999999999999999988888888887765443    3


Q ss_pred             CCCChhHHhhhc
Q psy3347         233 RFLSLEAIAIMR  244 (245)
Q Consensus       233 ~~~~~~~~~li~  244 (245)
                      ..+++++++||+
T Consensus       232 ~~~~~~~~~li~  243 (304)
T 2jam_A          232 DDISESAKDFIC  243 (304)
T ss_dssp             TTSCHHHHHHHH
T ss_pred             ccCCHHHHHHHH
Confidence            568889988876


No 89 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=7.9e-39  Score=265.75  Aligned_cols=213  Identities=23%  Similarity=0.351  Sum_probs=168.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.+..+|+.||+|++...   .....+.+.   ++++.++.++||||+++++++.+++..++||||+++++|.++++
T Consensus        26 V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~---~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   99 (310)
T 3s95_A           26 AIKVTHRETGEVMVMKELIRF---DEETQRTFL---KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIK   99 (310)
T ss_dssp             EEEEEETTTCCEEEEEEESCC---CHHHHHHHH---HHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHH
T ss_pred             EEEEEECCCCcEEEEEEeccC---CHHHHHHHH---HHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHH
Confidence            799999999999999998653   233334444   44778889999999999999999999999999999999999996


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.+||+|||+
T Consensus       100 ~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~---dlkp~Ni----------------------l~~~~~~~kl~Dfg~  154 (310)
T 3s95_A          100 SMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR---DLNSHNC----------------------LVRENKNVVVADFGL  154 (310)
T ss_dssp             HCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSTTSE----------------------EECTTSCEEECCCTT
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHHHhCCccCC---CCCcCeE----------------------EECCCCCEEEeeccc
Confidence            5  568999999999999999999999999999   8999888                      888899999999999


Q ss_pred             ccCCCCCCCC--------------CCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--
Q psy3347         159 CKEGMGFGDR--------------TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFD--  222 (245)
Q Consensus       159 ~~~~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~--  222 (245)
                      +.........              .....||+.|+|||.+.+..++.++||||||+++|+|++|..||..........  
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~  234 (310)
T 3s95_A          155 ARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL  234 (310)
T ss_dssp             CEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB
T ss_pred             ceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh
Confidence            8753222111              114578999999999999999999999999999999999999986532211000  


Q ss_pred             HHh-cCcccCCCCCChhHHhhhc
Q psy3347         223 SIV-NDEVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       223 ~~~-~~~~~~p~~~~~~~~~li~  244 (245)
                      .+. ......|..+++++.++|+
T Consensus       235 ~~~~~~~~~~~~~~~~~l~~li~  257 (310)
T 3s95_A          235 NVRGFLDRYCPPNCPPSFFPITV  257 (310)
T ss_dssp             CHHHHHHHTCCTTCCTTHHHHHH
T ss_pred             hhhccccccCCCCCCHHHHHHHH
Confidence            000 0011245677777777765


No 90 
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=5.5e-38  Score=260.81  Aligned_cols=217  Identities=19%  Similarity=0.261  Sum_probs=167.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|++...........+.+.   +++..++.++||||+++++++..++..+++|||+++++|.+++.
T Consensus        50 Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~---~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  126 (309)
T 2h34_A           50 VYEAEDTVRERIVALKLMSETLSSDPVFRTRMQ---REARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLR  126 (309)
T ss_dssp             EEEEEETTTTEEEEEEECGGGGGGSHHHHHHHH---HHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHH
T ss_pred             EEEEEEcCCCeEEEEEecCcccccCHHHHHHHH---HHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHH
Confidence            799999999999999999865433333334444   44777889999999999999999999999999999999999885


Q ss_pred             h-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 A-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 ~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                      . ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||++
T Consensus       127 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~---dlkp~NI----------------------l~~~~~~~kl~Dfg~~  181 (309)
T 2h34_A          127 RQGPLAPPRAVAIVRQIGSALDAAHAAGATHR---DVKPENI----------------------LVSADDFAYLVDFGIA  181 (309)
T ss_dssp             HHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EECTTSCEEECSCCC-
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcC---CCChHHE----------------------EEcCCCCEEEecCccC
Confidence            4 579999999999999999999999999999   8999998                      8888899999999998


Q ss_pred             cCCCCCC-CCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcc---cCCCCC
Q psy3347         160 KEGMGFG-DRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEV---RYPRFL  235 (245)
Q Consensus       160 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~---~~p~~~  235 (245)
                      ....... .......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.+.........+.....   ..+..+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (309)
T 2h34_A          182 SATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGI  261 (309)
T ss_dssp             ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTC
T ss_pred             ccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCC
Confidence            7532221 123345688899999999888899999999999999999999999987765544444433322   235678


Q ss_pred             ChhHHhhhcC
Q psy3347         236 SLEAIAIMRR  245 (245)
Q Consensus       236 ~~~~~~li~~  245 (245)
                      ++++.++|++
T Consensus       262 ~~~l~~li~~  271 (309)
T 2h34_A          262 PVAFDAVIAR  271 (309)
T ss_dssp             CTHHHHHHHH
T ss_pred             CHHHHHHHHH
Confidence            8888888753


No 91 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=3.1e-38  Score=262.70  Aligned_cols=194  Identities=23%  Similarity=0.395  Sum_probs=155.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++. +|+.||+|++..... .......+   .+++++++.++||||+++++++..++..++||||+++ +|.+++.
T Consensus        37 V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~---~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~  110 (311)
T 3niz_A           37 VYKAKDS-QGRIVALKRIRLDAE-DEGIPSTA---IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLD  110 (311)
T ss_dssp             EEEEEET-TSCEEEEEEEC-------CHHHHH---HHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHH
T ss_pred             EEEEEEC-CCCEEEEEEEecccc-cchhhHHH---HHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHH
Confidence            7999985 599999999975431 11122333   3457778889999999999999999999999999986 7776664


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  ..+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+|||+
T Consensus       111 ~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~---Dikp~NI----------------------l~~~~~~~kl~Dfg~  165 (311)
T 3niz_A          111 ENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHR---DLKPQNL----------------------LINSDGALKLADFGL  165 (311)
T ss_dssp             TCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EECTTCCEEECCCTT
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHHHHCCcccC---CCchHhE----------------------EECCCCCEEEccCcC
Confidence            3  358999999999999999999999999999   9999999                      888899999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      ++.............++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.
T Consensus       166 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~  233 (311)
T 3niz_A          166 ARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF  233 (311)
T ss_dssp             CEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHH
T ss_pred             ceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            9754333333445578999999999976 568999999999999999999999998876665555553


No 92 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=2.2e-38  Score=264.94  Aligned_cols=214  Identities=24%  Similarity=0.403  Sum_probs=169.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++......  ...+.+.   +++.+++.++||||+++++++..++..++||||+++++|.+++.
T Consensus        23 V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~---~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   97 (323)
T 3tki_A           23 VQLAVNRVTEEAVAVKIVDMKRAV--DCPENIK---KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE   97 (323)
T ss_dssp             EEEEEETTTCCEEEEEEEECC---------CHH---HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSB
T ss_pred             EEEEEECCCCcEEEEEEEEccccc--chHHHHH---HHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHh
Confidence            799999999999999999754321  1223333   44677788899999999999999999999999999999999886


Q ss_pred             h-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 A-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 ~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                      . ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.+||+|||++
T Consensus        98 ~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~---Dlkp~NI----------------------ll~~~~~~kl~Dfg~a  152 (323)
T 3tki_A           98 PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGLA  152 (323)
T ss_dssp             TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECTTCCEEECCCTTC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---ccchHHE----------------------EEeCCCCEEEEEeecc
Confidence            4 469999999999999999999999999999   9999998                      8888999999999998


Q ss_pred             cCCCCC--CCCCCcccCCCCccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcCccc--CCC
Q psy3347         160 KEGMGF--GDRTGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEE-EVFDSIVNDEVR--YPR  233 (245)
Q Consensus       160 ~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~~g~~pf~~~~~~-~~~~~~~~~~~~--~p~  233 (245)
                      ......  .......+||+.|+|||.+.+..+ +.++|||||||++|+|++|+.||.+.... ............  ...
T Consensus       153 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  232 (323)
T 3tki_A          153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK  232 (323)
T ss_dssp             EECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGG
T ss_pred             ceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccc
Confidence            743211  122345678999999999987765 77899999999999999999999765442 222223222222  225


Q ss_pred             CCChhHHhhhc
Q psy3347         234 FLSLEAIAIMR  244 (245)
Q Consensus       234 ~~~~~~~~li~  244 (245)
                      .+++++.+||+
T Consensus       233 ~~~~~~~~li~  243 (323)
T 3tki_A          233 KIDSAPLALLH  243 (323)
T ss_dssp             GSCHHHHHHHH
T ss_pred             cCCHHHHHHHH
Confidence            67888888875


No 93 
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=1.1e-37  Score=264.83  Aligned_cols=219  Identities=23%  Similarity=0.451  Sum_probs=177.9

Q ss_pred             CEeEEEecCCcEEEEEEeeccccc-chhhHH-HHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDII-ARDEVE-SLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~-~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|+++.+|+.||||++...... .....+ ......+++..++.+ +||||+++++++...+..++||||+++++|.+
T Consensus       110 Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~  189 (365)
T 2y7j_A          110 VRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFD  189 (365)
T ss_dssp             EEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHH
T ss_pred             EEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHH
Confidence            799999999999999999764311 111111 112223446667777 79999999999999999999999999999999


Q ss_pred             hhhh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeec
Q psy3347          78 HIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADF  156 (245)
Q Consensus        78 ~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df  156 (245)
                      ++.. ..+++..+..++.|++.||.|||+.|++|+   |++|+||                      +++.++.++|+||
T Consensus       190 ~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~---Dlkp~NI----------------------l~~~~~~ikl~Df  244 (365)
T 2y7j_A          190 YLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHR---DLKPENI----------------------LLDDNMQIRLSDF  244 (365)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECTTCCEEECCC
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecC---CCCHHHE----------------------EECCCCCEEEEec
Confidence            8854 579999999999999999999999999999   9999999                      8888999999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccC------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCccc
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTE------TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR  230 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~  230 (245)
                      |++..... ........||+.|+|||.+.+      ..++.++|||||||++|+|++|+.||.+.........+..+...
T Consensus       245 G~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~  323 (365)
T 2y7j_A          245 GFSCHLEP-GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ  323 (365)
T ss_dssp             TTCEECCT-TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             CcccccCC-CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC
Confidence            98875332 223445678999999999863      35788999999999999999999999988888887877776655


Q ss_pred             CC----CCCChhHHhhhcC
Q psy3347         231 YP----RFLSLEAIAIMRR  245 (245)
Q Consensus       231 ~p----~~~~~~~~~li~~  245 (245)
                      ++    ..+++++.+||++
T Consensus       324 ~~~~~~~~~~~~~~~li~~  342 (365)
T 2y7j_A          324 FSSPEWDDRSSTVKDLISR  342 (365)
T ss_dssp             CCHHHHSSSCHHHHHHHHH
T ss_pred             CCCcccccCCHHHHHHHHH
Confidence            43    5688888888763


No 94 
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.8e-38  Score=267.16  Aligned_cols=217  Identities=30%  Similarity=0.494  Sum_probs=171.6

Q ss_pred             CEeEEEecCCcEEEEEEeeccccc--chhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDII--ARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|++..+++.||+|++......  .....+.+.   +++++++.++||||+++++++...+..++||||+++++|.++
T Consensus        42 V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~---~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~  118 (345)
T 3hko_A           42 VRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIK---TEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDK  118 (345)
T ss_dssp             EEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHH---HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred             EEEEEECCCCceEEEeehhhhhhcccCHHHHHHHH---HHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHH
Confidence            799999999999999999864321  122334444   447778888999999999999999999999999999999988


Q ss_pred             hhh-----------------------------------------cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCC
Q psy3347          79 IHA-----------------------------------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT  117 (245)
Q Consensus        79 ~~~-----------------------------------------~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~  117 (245)
                      +..                                         ..+++..+..++.|++.||+|||++|++|+   |++
T Consensus       119 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~---Dlk  195 (345)
T 3hko_A          119 LNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHR---DIK  195 (345)
T ss_dssp             EEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECC---CCC
T ss_pred             HHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc---CCC
Confidence            741                                         113566788899999999999999999999   888


Q ss_pred             HHHHHHHHHHhhhccccCcccchhccccCCCC--ceEEeecCCccCCCCCCC----CCCcccCCCCccccccccC--CCC
Q psy3347         118 KEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG--YVKIADFGLCKEGMGFGD----RTGTFCGTPEFLAPEVLTE--TSY  189 (245)
Q Consensus       118 ~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~--~~~  189 (245)
                      |+||                      +++.++  .+||+|||++........    ......|++.|+|||.+.+  ..+
T Consensus       196 p~NI----------------------ll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  253 (345)
T 3hko_A          196 PENF----------------------LFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESY  253 (345)
T ss_dssp             GGGE----------------------EESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCC
T ss_pred             hhhE----------------------EEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCC
Confidence            8888                      665555  899999999874322111    2345578999999999965  678


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC----CCCChhHHhhhcC
Q psy3347         190 TRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP----RFLSLEAIAIMRR  245 (245)
Q Consensus       190 ~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~  245 (245)
                      +.++||||||+++|+|++|+.||.+....+....+......++    ..+++++++||++
T Consensus       254 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  313 (345)
T 3hko_A          254 GPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSN  313 (345)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHH
Confidence            8999999999999999999999999988888888877665443    3478899988863


No 95 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=1.2e-38  Score=278.62  Aligned_cols=194  Identities=24%  Similarity=0.371  Sum_probs=156.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC------CeEEEEEeeccCCc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE------AHVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~------~~~~lv~e~~~~~~   74 (245)
                      ||+|++..+|+.||||++.... ......+.   ..+++.+++.++||||+++++++...      +..|+||||++++ 
T Consensus        78 V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~---~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~-  152 (464)
T 3ttj_A           78 VCAAYDAVLDRNVAIKKLSRPF-QNQTHAKR---AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-  152 (464)
T ss_dssp             EEEEEETTTTEEEEEEEEESGG-GSHHHHHH---HHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEE-
T ss_pred             EEEEEECCCCCEEEEEEECccc-cChHHHHH---HHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCCC-
Confidence            7999999999999999998642 22222333   34557788889999999999999654      4689999999764 


Q ss_pred             hhhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          75 LMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        75 L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      +...+.. .+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+
T Consensus       153 l~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~iiHr---Dlkp~NI----------------------ll~~~~~~kl~  206 (464)
T 3ttj_A          153 LCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAGIIHR---DLKPSNI----------------------VVKSDCTLKIL  206 (464)
T ss_dssp             HHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EECTTSCEEEC
T ss_pred             HHHHHhh-cCCHHHHHHHHHHHHHHHHHHHHCCcccC---CCChHhE----------------------EEeCCCCEEEE
Confidence            5555543 48999999999999999999999999999   9999999                      88899999999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN  226 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~  226 (245)
                      |||+++.... .......+||+.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+..+....+..
T Consensus       207 DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~  277 (464)
T 3ttj_A          207 DFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE  277 (464)
T ss_dssp             CCCCC------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             EEEeeeecCC-CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            9999975322 2234556889999999999999999999999999999999999999999988777776644


No 96 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=2.7e-38  Score=260.01  Aligned_cols=194  Identities=25%  Similarity=0.400  Sum_probs=156.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++ .+|+.||+|++...... ....+.+.   ++++.++.++||||+++++++..++..++||||+++ +|.+++.
T Consensus        18 V~~~~~-~~~~~~aiK~~~~~~~~-~~~~~~~~---~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~   91 (288)
T 1ob3_A           18 VYKAQN-NYGETFALKKIRLEKED-EGIPSTTI---REISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLD   91 (288)
T ss_dssp             EEEEEE-TTSCEEEEEEECCSSGG-GCCCHHHH---HHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHH
T ss_pred             EEEEEc-CCCCEEEEEEEeccccc-cccchhHH---HHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHH
Confidence            799998 67999999999764321 11123333   457888899999999999999999999999999976 8888775


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  +.+++..+..++.|++.||+|||++|++||   |+||+||                      +++.++.+||+|||+
T Consensus        92 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---dlkp~Ni----------------------l~~~~~~~kl~Dfg~  146 (288)
T 1ob3_A           92 VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR---DLKPQNL----------------------LINREGELKIADFGL  146 (288)
T ss_dssp             TSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EECTTSCEEECCTTH
T ss_pred             hcccCCCHHHHHHHHHHHHHHHHHHHHCCeecC---CCCHHHE----------------------EEcCCCCEEEeECcc
Confidence            3  568999999999999999999999999999   9999999                      888899999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      +..............+|..|+|||.+.+. .++.++|||||||++|+|++|+.||.+.+..+....+.
T Consensus       147 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~  214 (288)
T 1ob3_A          147 ARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF  214 (288)
T ss_dssp             HHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             ccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            87533222233445789999999999764 58999999999999999999999999887776666553


No 97 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=2e-38  Score=265.76  Aligned_cols=196  Identities=21%  Similarity=0.285  Sum_probs=154.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|+++..... ....+.   ..+++++++.++||||+++++++..++..++||||+++ +|.+++.
T Consensus        50 V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~---~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~  124 (329)
T 3gbz_A           50 VYKAIDTVTNETVAIKRIRLEHEE-EGVPGT---AIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMD  124 (329)
T ss_dssp             EEEEEETTTTEEEEEEECCCCC------------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHH
T ss_pred             EEEEEECCCCceEEEEEEcccccc-cccchh---HHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC-CHHHHHh
Confidence            799999999999999999764321 111222   24557888999999999999999999999999999985 8888885


Q ss_pred             h-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc-----CCCCceEEe
Q psy3347          81 A-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN-----DTEGYVKIA  154 (245)
Q Consensus        81 ~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~kl~  154 (245)
                      . ..+++..+..++.|++.||+|||++||+|+   |+||+||                      ++     +.++.+||+
T Consensus       125 ~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~~~~~~kl~  179 (329)
T 3gbz_A          125 KNPDVSMRVIKSFLYQLINGVNFCHSRRCLHR---DLKPQNL----------------------LLSVSDASETPVLKIG  179 (329)
T ss_dssp             HCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EEEC-----CCEEEEC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHhCCEECC---CCCHHHE----------------------EEecCCCCccceEEEC
Confidence            4 579999999999999999999999999999   8888888                      55     445679999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN  226 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~  226 (245)
                      |||++..............+|..|+|||.+.+. .++.++|||||||++|+|++|+.||.+.+..+....+..
T Consensus       180 Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  252 (329)
T 3gbz_A          180 DFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFE  252 (329)
T ss_dssp             CTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             cCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHH
Confidence            999987533333334455779999999999874 489999999999999999999999999888777776643


No 98 
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=1.2e-39  Score=278.06  Aligned_cols=210  Identities=16%  Similarity=0.183  Sum_probs=163.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeee-------EEEeeCC------------
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-------ACFQTEA------------   61 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~-------~~~~~~~------------   61 (245)
                      ||+|+++.+|+.||||++...........+.+.+|.++++.++.++||||++++       +++...+            
T Consensus        89 V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (377)
T 3byv_A           89 YLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDER  168 (377)
T ss_dssp             EEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC-----
T ss_pred             EEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCC
Confidence            799999999999999999865444445556677776666778888999999998       7776554            


Q ss_pred             -----eEEEEEeeccCCchhhhhhh-cCCCh-------HHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHh
Q psy3347          62 -----HVCFVMEYAAGGDLMMHIHA-DVFSE-------PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV  128 (245)
Q Consensus        62 -----~~~lv~e~~~~~~L~~~~~~-~~l~~-------~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~  128 (245)
                           ..|++|||+ +|+|.+++.. ..+++       ..+..++.|++.||+|||++||+||   |+||+||       
T Consensus       169 ~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr---Dikp~NI-------  237 (377)
T 3byv_A          169 DMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT---YLRPVDI-------  237 (377)
T ss_dssp             -CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS---CCCGGGE-------
T ss_pred             ceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC---CCCHHHE-------
Confidence                 389999999 5799998853 33444       7777899999999999999999999   9999999       


Q ss_pred             hhccccCcccchhccccCCCCceEEeecCCccCCCCCCCCCCcccCCCCccccccccCC-----------CCCcchhHHH
Q psy3347         129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET-----------SYTRAVDWWG  197 (245)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~Dvws  197 (245)
                                     +++.++.+||+|||+++..   .......+| ..|+|||.+.+.           .++.++||||
T Consensus       238 ---------------ll~~~~~~kL~DFG~a~~~---~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwS  298 (377)
T 3byv_A          238 ---------------VLDQRGGVFLTGFEHLVRD---GARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWA  298 (377)
T ss_dssp             ---------------EECTTCCEEECCGGGCEET---TCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHH
T ss_pred             ---------------EEcCCCCEEEEechhheec---CCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHH
Confidence                           8888999999999998752   222345567 899999999877           8999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChhHHhhhc
Q psy3347         198 LGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       198 lG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~  244 (245)
                      |||++|+|++|+.||.+....+....+.    ..+..+++++++||+
T Consensus       299 lG~il~elltg~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~li~  341 (377)
T 3byv_A          299 LGLVIYWIWCADLPITKDAALGGSEWIF----RSCKNIPQPVRALLE  341 (377)
T ss_dssp             HHHHHHHHHHSSCCC------CCSGGGG----SSCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCcccccccchhhhh----hhccCCCHHHHHHHH
Confidence            9999999999999997665433322222    233667888888875


No 99 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=6.5e-38  Score=260.14  Aligned_cols=195  Identities=24%  Similarity=0.357  Sum_probs=157.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|++..... .....+.+   .++++.++.++||||+++++++...+..++||||+++++|..+..
T Consensus        19 V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~---~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~   94 (311)
T 4agu_A           19 VFKCRNRDTGQIVAIKKFLESED-DPVIKKIA---LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR   94 (311)
T ss_dssp             EEEEEETTTCCEEEEEEECCCCC--HHHHHHH---HHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH
T ss_pred             EEEEEeCCCCcEEEEEEeecccc-chHHHHHH---HHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHh
Confidence            79999999999999999876432 11222333   345777888999999999999999999999999999999988875


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       ...+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||++
T Consensus        95 ~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~---dlkp~Ni----------------------l~~~~~~~kl~Dfg~~  149 (311)
T 4agu_A           95 YQRGVPEHLVKSITWQTLQAVNFCHKHNCIHR---DVKPENI----------------------LITKHSVIKLCDFGFA  149 (311)
T ss_dssp             TSSCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTSCEEECCCTTC
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCC---CCChhhE----------------------EEcCCCCEEEeeCCCc
Confidence             4568999999999999999999999999999   9999998                      8888999999999999


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI  224 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~  224 (245)
                      ..............|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||.+.+..+....+
T Consensus       150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  215 (311)
T 4agu_A          150 RLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLI  215 (311)
T ss_dssp             EECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             hhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            764433333445678899999999976 56899999999999999999999999988776665554


No 100
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=2.2e-38  Score=266.29  Aligned_cols=209  Identities=26%  Similarity=0.439  Sum_probs=171.7

Q ss_pred             CEeEEEecCCcEEEEEEeecccccch-----hhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCC-c
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIAR-----DEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG-D   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~-----~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~-~   74 (245)
                      ||+|+++.+|+.||+|++........     ...+.+   .+++++++.++||||+++++++...+..++|||++.+| +
T Consensus        40 Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~---~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~  116 (335)
T 3dls_A           40 VWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKV---TLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLD  116 (335)
T ss_dssp             EEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEE---EHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCB
T ss_pred             EEEEEECCCCcEEEEEEEehhhcccccccchHHHHHH---HHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCcc
Confidence            79999999999999999987543221     112223   33477788999999999999999999999999999766 9


Q ss_pred             hhhhhhh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEE
Q psy3347          75 LMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKI  153 (245)
Q Consensus        75 L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl  153 (245)
                      |..++.. ..+++..+..++.|++.||+|||++|++||   |+||+||                      +++.++.+||
T Consensus       117 l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~kL  171 (335)
T 3dls_A          117 LFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHR---DIKDENI----------------------VIAEDFTIKL  171 (335)
T ss_dssp             HHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECTTSCEEE
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEe---ccCHHHE----------------------EEcCCCcEEE
Confidence            9988865 479999999999999999999999999999   9999999                      8888999999


Q ss_pred             eecCCccCCCCCCCCCCcccCCCCccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC
Q psy3347         154 ADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP  232 (245)
Q Consensus       154 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p  232 (245)
                      +|||++..... ........||+.|+|||.+.+..+ +.++|||||||++|+|++|+.||....      .........|
T Consensus       172 ~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~~~~  244 (335)
T 3dls_A          172 IDFGSAAYLER-GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE------ETVEAAIHPP  244 (335)
T ss_dssp             CCCTTCEECCT-TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG------GGTTTCCCCS
T ss_pred             eecccceECCC-CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH------HHHhhccCCC
Confidence            99999875332 223445678999999999988776 789999999999999999999997532      2333444567


Q ss_pred             CCCChhHHhhhc
Q psy3347         233 RFLSLEAIAIMR  244 (245)
Q Consensus       233 ~~~~~~~~~li~  244 (245)
                      ..+++++++||+
T Consensus       245 ~~~~~~l~~li~  256 (335)
T 3dls_A          245 YLVSKELMSLVS  256 (335)
T ss_dssp             SCCCHHHHHHHH
T ss_pred             cccCHHHHHHHH
Confidence            778888888875


No 101
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.4e-37  Score=265.79  Aligned_cols=214  Identities=28%  Similarity=0.481  Sum_probs=177.1

Q ss_pred             CEeEEEecC-------CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccC
Q psy3347           1 VILSQYRNT-------GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAG   72 (245)
Q Consensus         1 V~~a~~~~~-------~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~   72 (245)
                      ||+|++..+       +..||+|+++...  .....+.+.+|   +++++.+ +||||+++++++..++..++||||+++
T Consensus        85 Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E---~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~  159 (382)
T 3tt0_A           85 VVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISE---MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK  159 (382)
T ss_dssp             EEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHH---HHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             EEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHH---HHHHHHhcCCchhhhheeeeccCCceEEEEEecCC
Confidence            789987643       3589999997642  23333444444   6666677 899999999999999999999999999


Q ss_pred             Cchhhhhhhc-----------------CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccC
Q psy3347          73 GDLMMHIHAD-----------------VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVN  135 (245)
Q Consensus        73 ~~L~~~~~~~-----------------~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~  135 (245)
                      ++|.+++...                 .+++..+..++.|++.||+|||++||+||   |+||+||              
T Consensus       160 g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~---Dlkp~NI--------------  222 (382)
T 3tt0_A          160 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR---DLAARNV--------------  222 (382)
T ss_dssp             CBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE--------------
T ss_pred             CcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecC---CCCcceE--------------
Confidence            9999998643                 38999999999999999999999999999   9999999              


Q ss_pred             cccchhccccCCCCceEEeecCCccCCCCCC--CCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q psy3347         136 SSQEIKLTVNDTEGYVKIADFGLCKEGMGFG--DRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPF  212 (245)
Q Consensus       136 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf  212 (245)
                              +++.++.+||+|||+++......  .......++..|+|||.+.+..++.++|||||||++|+|++ |..||
T Consensus       223 --------ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~  294 (382)
T 3tt0_A          223 --------LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY  294 (382)
T ss_dssp             --------EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             --------EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence                    88889999999999987543221  12334456778999999999899999999999999999999 99999


Q ss_pred             CCCCHHHHHHHHhcCc-ccCCCCCChhHHhhhc
Q psy3347         213 PGDDEEEVFDSIVNDE-VRYPRFLSLEAIAIMR  244 (245)
Q Consensus       213 ~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~  244 (245)
                      .+.+..+....+..+. ...|..+++++.+||+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  327 (382)
T 3tt0_A          295 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMR  327 (382)
T ss_dssp             TTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHH
Confidence            9998888888776653 3567889999999886


No 102
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=2.2e-38  Score=269.44  Aligned_cols=214  Identities=22%  Similarity=0.342  Sum_probs=173.6

Q ss_pred             CEeEE-----EecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCch
Q psy3347           1 VILSQ-----YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L   75 (245)
                      ||+|+     +..+++.||+|+++...  .......+.+   ++.+++.++||||+++++++...+..++||||+++++|
T Consensus        87 Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~---E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L  161 (367)
T 3l9p_A           87 VYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLM---EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL  161 (367)
T ss_dssp             EEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHH---HHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEH
T ss_pred             EEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHH---HHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCH
Confidence            78998     55678899999997532  2223333444   46678888999999999999999999999999999999


Q ss_pred             hhhhhhc--------CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC
Q psy3347          76 MMHIHAD--------VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT  147 (245)
Q Consensus        76 ~~~~~~~--------~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~  147 (245)
                      .++++..        .+++..+..++.|++.||+|||++||+||   |+||+||                      +++.
T Consensus       162 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr---Dlkp~NI----------------------ll~~  216 (367)
T 3l9p_A          162 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR---DIAARNC----------------------LLTC  216 (367)
T ss_dssp             HHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EESC
T ss_pred             HHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCC---CCChhhE----------------------EEec
Confidence            9998542        48889999999999999999999999999   8888888                      6664


Q ss_pred             C---CceEEeecCCccCCCC--CCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy3347         148 E---GYVKIADFGLCKEGMG--FGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVF  221 (245)
Q Consensus       148 ~---~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~  221 (245)
                      +   ..+||+|||+++....  .........+|+.|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+..
T Consensus       217 ~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~  296 (367)
T 3l9p_A          217 PGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL  296 (367)
T ss_dssp             SSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred             CCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            4   4599999999863211  1122334567889999999988899999999999999999998 99999999988888


Q ss_pred             HHHhcCc-ccCCCCCChhHHhhhc
Q psy3347         222 DSIVNDE-VRYPRFLSLEAIAIMR  244 (245)
Q Consensus       222 ~~~~~~~-~~~p~~~~~~~~~li~  244 (245)
                      ..+..+. ...|..+++++.+||+
T Consensus       297 ~~i~~~~~~~~~~~~~~~l~~li~  320 (367)
T 3l9p_A          297 EFVTSGGRMDPPKNCPGPVYRIMT  320 (367)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             HHHHcCCCCCCCccCCHHHHHHHH
Confidence            8887764 3567889999999886


No 103
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=9.5e-38  Score=261.69  Aligned_cols=196  Identities=28%  Similarity=0.417  Sum_probs=159.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|++..... .....+.+   .++++.++.++||||+++++++...+..++||||+++++|..+..
T Consensus        41 V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~---~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~  116 (331)
T 4aaa_A           41 VMKCRNKDTGRIVAIKKFLESDD-DKMVKKIA---MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLEL  116 (331)
T ss_dssp             EEEEEETTTCCEEEEEEEESCSS-CHHHHHHH---HHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH
T ss_pred             EEEEEECCCCceEEEEEEecCCC-chHHHHHH---HHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHh
Confidence            79999999999999999976432 22222233   345777888999999999999999999999999999999988764


Q ss_pred             -hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 -ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 -~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                       ...+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||++
T Consensus       117 ~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~---dlkp~Ni----------------------l~~~~~~~kl~Dfg~~  171 (331)
T 4aaa_A          117 FPNGLDYQVVQKYLFQIINGIGFCHSHNIIHR---DIKPENI----------------------LVSQSGVVKLCDFGFA  171 (331)
T ss_dssp             STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EECTTSCEEECCCTTC
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHHCCEEcc---CcChheE----------------------EEcCCCcEEEEeCCCc
Confidence             4579999999999999999999999999999   9999998                      8888999999999998


Q ss_pred             cCCCCCCCCCCcccCCCCccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         160 KEGMGFGDRTGTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      ..............|+..|+|||.+.+. .++.++|||||||++|+|++|+.||.+.+..+....+.
T Consensus       172 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  238 (331)
T 4aaa_A          172 RTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM  238 (331)
T ss_dssp             ------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             eeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence            7543333334456789999999999775 68899999999999999999999999887766655543


No 104
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=5.5e-38  Score=255.57  Aligned_cols=211  Identities=25%  Similarity=0.439  Sum_probs=175.7

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++. +++.||+|++......    .+.+.   ++++.++.++||||+++++++..++..++||||+++++|.+++.
T Consensus        26 V~~~~~~-~~~~vavK~~~~~~~~----~~~~~---~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   97 (269)
T 4hcu_A           26 VHLGYWL-NKDKVAIKTIREGAMS----EEDFI---EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR   97 (269)
T ss_dssp             EEEEEET-TTEEEEEEEECTTSBC----HHHHH---HHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHH
T ss_pred             EEEEEec-CCCeEEEEEecccccC----HHHHH---HHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHH
Confidence            7999887 4778999999864322    23344   34777888999999999999999999999999999999999985


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||+
T Consensus        98 ~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~---dikp~Ni----------------------l~~~~~~~kl~Dfg~  152 (269)
T 4hcu_A           98 TQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR---DLAARNC----------------------LVGENQVIKVSDFGM  152 (269)
T ss_dssp             TTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EECGGGCEEECCTTG
T ss_pred             hcCcccCHHHHHHHHHHHHHHHHHHHhCCeecC---CcchheE----------------------EEcCCCCEEeccccc
Confidence            4  458999999999999999999999999999   8999888                      778889999999999


Q ss_pred             ccCCCCCC-CCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-cccCCCCC
Q psy3347         159 CKEGMGFG-DRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND-EVRYPRFL  235 (245)
Q Consensus       159 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~-~~~~p~~~  235 (245)
                      +....... .......++..|+|||.+.+..++.++||||||+++|+|++ |+.||.+.+..+....+... ....|..+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  232 (269)
T 4hcu_A          153 TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA  232 (269)
T ss_dssp             GGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTS
T ss_pred             cccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcC
Confidence            87532211 11223445678999999988889999999999999999999 99999999888888888766 34457788


Q ss_pred             ChhHHhhhc
Q psy3347         236 SLEAIAIMR  244 (245)
Q Consensus       236 ~~~~~~li~  244 (245)
                      ++++.++|+
T Consensus       233 ~~~~~~li~  241 (269)
T 4hcu_A          233 STHVYQIMN  241 (269)
T ss_dssp             CHHHHHHHH
T ss_pred             CHHHHHHHH
Confidence            999988875


No 105
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1.8e-37  Score=254.79  Aligned_cols=212  Identities=27%  Similarity=0.457  Sum_probs=170.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.+|+|++.....  ....+.+.+   +++.++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        38 V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~---E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  112 (285)
T 3is5_A           38 VHLVEERSSGLERVIKTINKDRS--QVPMEQIEA---EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIV  112 (285)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGC--CSCHHHHHH---HHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHH
T ss_pred             EEEEEEccCCceEEEEEeecccc--chhHHHHHH---HHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHH
Confidence            79999999999999999986532  222344444   4777889999999999999999999999999999999988773


Q ss_pred             h-----cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc---CCCCceE
Q psy3347          81 A-----DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN---DTEGYVK  152 (245)
Q Consensus        81 ~-----~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~k  152 (245)
                      .     ..+++..+..++.|++.||+|||++|++|+   |++|+||                      ++   +.++.++
T Consensus       113 ~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~---dikp~NI----------------------l~~~~~~~~~~k  167 (285)
T 3is5_A          113 SAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHK---DLKPENI----------------------LFQDTSPHSPIK  167 (285)
T ss_dssp             HHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCSGGGE----------------------EESSSSTTCCEE
T ss_pred             hhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEEC---CCCHHHE----------------------EEecCCCCCCEE
Confidence            2     568999999999999999999999999999   8888888                      55   4567899


Q ss_pred             EeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC
Q psy3347         153 IADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP  232 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p  232 (245)
                      |+|||++...... .......|+..|+|||.+. ..++.++||||||+++|+|++|+.||.+.+..+....+......++
T Consensus       168 l~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~  245 (285)
T 3is5_A          168 IIDFGLAELFKSD-EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYA  245 (285)
T ss_dssp             ECCCCCCCC-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred             EEeeecceecCCc-ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccc
Confidence            9999998753222 2234557899999999985 4688999999999999999999999999888877777765554433


Q ss_pred             ---CCCChhHHhhhc
Q psy3347         233 ---RFLSLEAIAIMR  244 (245)
Q Consensus       233 ---~~~~~~~~~li~  244 (245)
                         ..+++++.+||+
T Consensus       246 ~~~~~~~~~~~~li~  260 (285)
T 3is5_A          246 VECRPLTPQAVDLLK  260 (285)
T ss_dssp             C--CCCCHHHHHHHH
T ss_pred             cccCcCCHHHHHHHH
Confidence               447888888875


No 106
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=2.3e-38  Score=258.91  Aligned_cols=216  Identities=26%  Similarity=0.420  Sum_probs=176.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee--CCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT--EAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~--~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|+++.+|+.||+|++...... ....+.+.+   +++.++.++||||+++++++..  .+..++||||+++++|.++
T Consensus        22 V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~---e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~   97 (279)
T 2w5a_A           22 CQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVS---EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASV   97 (279)
T ss_dssp             EEEEEETTTCCEEEEEEEECTTCC-HHHHHHHHH---HHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHH
T ss_pred             EEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHH---HHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHH
Confidence            799999999999999999865322 223334444   4677888899999999998854  5789999999999999998


Q ss_pred             hhh-----cCCChHHHHHHHHHHHHHHHHhhhcC-----ccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCC
Q psy3347          79 IHA-----DVFSEPRAVFYAACVVLGLQYLHESR-----IIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTE  148 (245)
Q Consensus        79 ~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~-----i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (245)
                      +..     ..+++..+..++.|++.||+|||++|     ++|+   |++|+||                      +++.+
T Consensus        98 l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~---dl~p~NI----------------------l~~~~  152 (279)
T 2w5a_A           98 ITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR---DLKPANV----------------------FLDGK  152 (279)
T ss_dssp             HHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCC---CCSGGGE----------------------EECSS
T ss_pred             HHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEe---ccchhhE----------------------EEcCC
Confidence            853     24899999999999999999999999     9999   9999998                      88889


Q ss_pred             CceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCc
Q psy3347         149 GYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDE  228 (245)
Q Consensus       149 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~  228 (245)
                      +.++|+|||++..............|+..|+|||.+.+..++.++||||||+++|+|++|+.||.+.+..+....+..+.
T Consensus       153 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~  232 (279)
T 2w5a_A          153 QNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK  232 (279)
T ss_dssp             SCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             CCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcc
Confidence            99999999998753322222234568899999999988889999999999999999999999999888888877777665


Q ss_pred             c-cCCCCCChhHHhhhcC
Q psy3347         229 V-RYPRFLSLEAIAIMRR  245 (245)
Q Consensus       229 ~-~~p~~~~~~~~~li~~  245 (245)
                      . .+|..+++++.++|++
T Consensus       233 ~~~~~~~~~~~l~~li~~  250 (279)
T 2w5a_A          233 FRRIPYRYSDELNEIITR  250 (279)
T ss_dssp             CCCCCTTSCHHHHHHHHH
T ss_pred             cccCCcccCHHHHHHHHH
Confidence            4 5678899999998863


No 107
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=5.1e-38  Score=267.67  Aligned_cols=214  Identities=21%  Similarity=0.311  Sum_probs=166.4

Q ss_pred             CEeEEEe---cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYR---NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|+++   .++..||||+++...  .....+.+.+   ++++++.++||||+++++++...+..++||||+++++|.+
T Consensus        61 Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~---E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~  135 (373)
T 2qol_A           61 VCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS  135 (373)
T ss_dssp             EEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHH---HHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred             EEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHH---HHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHH
Confidence            7899887   567889999997642  2233344444   4777889999999999999999999999999999999999


Q ss_pred             hhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          78 HIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        78 ~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      +++.  ..+++..+..++.|++.||+|||++|++||   |+||+||                      +++.++.+||+|
T Consensus       136 ~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~kl~D  190 (373)
T 2qol_A          136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR---DLAARNI----------------------LINSNLVCKVSD  190 (373)
T ss_dssp             HHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EECTTCCEEECC
T ss_pred             HHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCC---CCCcceE----------------------EEcCCCCEEECc
Confidence            9964  368999999999999999999999999999   9999999                      888899999999


Q ss_pred             cCCccCCCCCCCC---CCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-cc
Q psy3347         156 FGLCKEGMGFGDR---TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VR  230 (245)
Q Consensus       156 fg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~  230 (245)
                      ||+++........   .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.+.+..+....+..+. .+
T Consensus       191 fg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~  270 (373)
T 2qol_A          191 FGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP  270 (373)
T ss_dssp             C----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECC
T ss_pred             CccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            9998754332211   112234668999999988899999999999999999998 999999888888887776653 34


Q ss_pred             CCCCCChhHHhhhc
Q psy3347         231 YPRFLSLEAIAIMR  244 (245)
Q Consensus       231 ~p~~~~~~~~~li~  244 (245)
                      .|..+++++.+||.
T Consensus       271 ~~~~~~~~l~~li~  284 (373)
T 2qol_A          271 PPMDCPAALYQLML  284 (373)
T ss_dssp             CCTTCBHHHHHHHH
T ss_pred             CCccccHHHHHHHH
Confidence            56778888888875


No 108
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=2.1e-38  Score=264.33  Aligned_cols=195  Identities=29%  Similarity=0.478  Sum_probs=157.7

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC--eEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA--HVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~--~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|++..+|+.||+|++.....  ....+.+.   +++++++.++||||+++++++...+  +.++||||+++++|.++
T Consensus        25 V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~---~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~   99 (319)
T 4euu_A           25 VFRGRHKKTGDLFAIKVFNNISF--LRPVDVQM---REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTV   99 (319)
T ss_dssp             EEEEEETTTCCEEEEEEECGGGG--GSCHHHHH---HHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHH
T ss_pred             EEEEEECCCCcEEEEEEeccccc--cchHHHHH---HHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHH
Confidence            79999999999999999985432  12233333   4477788889999999999998765  88999999999999999


Q ss_pred             hhhc----CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc----CCCCc
Q psy3347          79 IHAD----VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN----DTEGY  150 (245)
Q Consensus        79 ~~~~----~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  150 (245)
                      +...    .+++..+..++.|++.||+|||++||+|+   |+||+||                      ++    +.++.
T Consensus       100 l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~~~~  154 (319)
T 4euu_A          100 LEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR---NIKPGNI----------------------MRVIGEDGQSV  154 (319)
T ss_dssp             HHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EEEECTTSCEE
T ss_pred             HHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecC---CCCHHHE----------------------EEeccCCCCce
Confidence            8542    38999999999999999999999999999   8888888                      55    66778


Q ss_pred             eEEeecCCccCCCCCCCCCCcccCCCCcccccccc--------CCCCCcchhHHHHHHHHHHHHhCCCCCCCC----CHH
Q psy3347         151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLT--------ETSYTRAVDWWGLGVLIFEMLVGESPFPGD----DEE  218 (245)
Q Consensus       151 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~DvwslG~~l~el~~g~~pf~~~----~~~  218 (245)
                      +||+|||+++..... .......|+..|+|||.+.        +..++.++|||||||++|+|++|+.||...    ...
T Consensus       155 ~kL~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  233 (319)
T 4euu_A          155 YKLTDFGAARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK  233 (319)
T ss_dssp             EEECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCH
T ss_pred             EEEccCCCceecCCC-CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhH
Confidence            999999999754332 2234557899999999986        467889999999999999999999999643    234


Q ss_pred             HHHHHHhc
Q psy3347         219 EVFDSIVN  226 (245)
Q Consensus       219 ~~~~~~~~  226 (245)
                      +....+..
T Consensus       234 ~~~~~~~~  241 (319)
T 4euu_A          234 EVMYKIIT  241 (319)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhc
Confidence            45555544


No 109
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=9.3e-38  Score=259.76  Aligned_cols=214  Identities=29%  Similarity=0.474  Sum_probs=167.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhh-cCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANT-MRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~-~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|++..+|+.||+|++.....   ...+.+.+|   ++.+.+ .+||||+++++++..++..++||||+++++|.+++
T Consensus        29 V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E---~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l  102 (316)
T 2ac3_A           29 VQTCINLITSQEYAVKIIEKQPG---HIRSRVFRE---VEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHI  102 (316)
T ss_dssp             EEEEECSSSCCEEEEEEEECCSS---CCHHHHHHH---HHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHH
T ss_pred             EEEEEEcCCCcEEEEEEEeeCcc---hhHHHHHHH---HHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHH
Confidence            79999999999999999976431   223344444   555666 47999999999999999999999999999999988


Q ss_pred             h-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCc---eEEee
Q psy3347          80 H-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY---VKIAD  155 (245)
Q Consensus        80 ~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~kl~D  155 (245)
                      . ...+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.   +||+|
T Consensus       103 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~---dlkp~Ni----------------------l~~~~~~~~~~kl~D  157 (316)
T 2ac3_A          103 HKRRHFNELEASVVVQDVASALDFLHNKGIAHR---DLKPENI----------------------LCEHPNQVSPVKICD  157 (316)
T ss_dssp             HHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EESCSSSSCSEEECC
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHHHhCCceeC---CCCHHHE----------------------EEccCCCcCceEEEE
Confidence            5 4678999999999999999999999999999   8888888                      6666554   99999


Q ss_pred             cCCccCCCCCCC-------CCCcccCCCCccccccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-------
Q psy3347         156 FGLCKEGMGFGD-------RTGTFCGTPEFLAPEVLTE-----TSYTRAVDWWGLGVLIFEMLVGESPFPGDD-------  216 (245)
Q Consensus       156 fg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~~l~el~~g~~pf~~~~-------  216 (245)
                      ||++........       .....+|+..|+|||.+.+     ..++.++|||||||++|+|++|+.||.+..       
T Consensus       158 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~  237 (316)
T 2ac3_A          158 FDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD  237 (316)
T ss_dssp             TTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-
T ss_pred             ccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccc
Confidence            999874321111       1223468999999999965     457899999999999999999999997653       


Q ss_pred             --------HHHHHHHHhcCcccCC----CCCChhHHhhhcC
Q psy3347         217 --------EEEVFDSIVNDEVRYP----RFLSLEAIAIMRR  245 (245)
Q Consensus       217 --------~~~~~~~~~~~~~~~p----~~~~~~~~~li~~  245 (245)
                              .......+..+...+|    ..+++++++||++
T Consensus       238 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  278 (316)
T 2ac3_A          238 RGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISK  278 (316)
T ss_dssp             ---CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHH
T ss_pred             ccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHH
Confidence                    2345556666666655    4688899988863


No 110
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=6.8e-38  Score=260.08  Aligned_cols=214  Identities=25%  Similarity=0.428  Sum_probs=176.2

Q ss_pred             CEeEEEe-----cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCch
Q psy3347           1 VILSQYR-----NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L   75 (245)
                      ||+|.+.     .+++.||+|++....  .....+.+.   ++++.++.++||||+++++++...+..++||||+++++|
T Consensus        39 V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~---~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L  113 (314)
T 2ivs_A           39 VVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLL---SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL  113 (314)
T ss_dssp             EEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHH---HHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred             EEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHH---HHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCH
Confidence            7899884     456899999997542  223334444   457788899999999999999999999999999999999


Q ss_pred             hhhhhhc-------------------------CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhh
Q psy3347          76 MMHIHAD-------------------------VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE  130 (245)
Q Consensus        76 ~~~~~~~-------------------------~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~  130 (245)
                      .+++...                         .+++..+..++.|++.||+|||++|++|+   |++|+||         
T Consensus       114 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~---dikp~NI---------  181 (314)
T 2ivs_A          114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR---DLAARNI---------  181 (314)
T ss_dssp             HHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE---------
T ss_pred             HHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccc---ccchheE---------
Confidence            9998542                         27888999999999999999999999999   9999998         


Q ss_pred             ccccCcccchhccccCCCCceEEeecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-
Q psy3347         131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-  207 (245)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-  207 (245)
                                   +++.++.++|+|||++........  ......++..|+|||.+.+..++.++||||||+++|+|++ 
T Consensus       182 -------------li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~  248 (314)
T 2ivs_A          182 -------------LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL  248 (314)
T ss_dssp             -------------EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred             -------------EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhC
Confidence                         888889999999999875322221  1233456778999999988889999999999999999999 


Q ss_pred             CCCCCCCCCHHHHHHHHhcCc-ccCCCCCChhHHhhhc
Q psy3347         208 GESPFPGDDEEEVFDSIVNDE-VRYPRFLSLEAIAIMR  244 (245)
Q Consensus       208 g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~  244 (245)
                      |..||.+.+..+....+.... ...|..+++++.++|+
T Consensus       249 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  286 (314)
T 2ivs_A          249 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLML  286 (314)
T ss_dssp             SCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHH
Confidence            999999888877777776653 3567889999999886


No 111
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=5.2e-38  Score=267.07  Aligned_cols=192  Identities=24%  Similarity=0.443  Sum_probs=148.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC------CeEEEEEeeccCCc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE------AHVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~------~~~~lv~e~~~~~~   74 (245)
                      ||+|++..+|+.||||++..... .....+.+   .+++++++.++||||+++++++...      +..+++||++ +++
T Consensus        45 V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~---~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~  119 (367)
T 2fst_X           45 VCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRT---YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GAD  119 (367)
T ss_dssp             EEEEEETTTTEEEEEEECSSTTS-SHHHHHHH---HHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEE
T ss_pred             EEEEEECCCCCEEEEEEeCcccc-CHHHHHHH---HHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCC
Confidence            79999999999999999975421 22222333   4557778889999999999999654      5689999998 679


Q ss_pred             hhhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          75 LMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        75 L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      |..+++...+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+
T Consensus       120 L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~---Dlkp~NI----------------------ll~~~~~~kL~  174 (367)
T 2fst_X          120 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR---DLKPSNL----------------------AVNEDCELKIL  174 (367)
T ss_dssp             CC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EECTTCCEEEC
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeC---CCCHhhE----------------------EECCCCCEEEe
Confidence            9999888889999999999999999999999999999   9999999                      88889999999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      |||+++....   .....+||..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.
T Consensus       175 DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~  243 (367)
T 2fst_X          175 DFGLARHTAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL  243 (367)
T ss_dssp             C------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             eccccccccc---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            9999875322   2345678999999999977 678999999999999999999999999988777666654


No 112
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=1.6e-37  Score=260.00  Aligned_cols=214  Identities=29%  Similarity=0.480  Sum_probs=172.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|+++.+|+.||+|++...... ......+.+|   +..++.+ .||||+++++++...+..++||||+.+++|.+++
T Consensus        45 V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e---~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~  120 (327)
T 3lm5_A           45 VRQCISKSTGQEYAAKFLKKRRRG-QDCRAEILHE---IAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLC  120 (327)
T ss_dssp             EEEEEETTTCCEEEEEEEESEETT-EECHHHHHHH---HHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGG
T ss_pred             EEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHH---HHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHH
Confidence            799999999999999999864322 1223444444   4455555 5799999999999999999999999999999988


Q ss_pred             hh---cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC---CCceEE
Q psy3347          80 HA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT---EGYVKI  153 (245)
Q Consensus        80 ~~---~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~kl  153 (245)
                      ..   ..+++..+..++.|++.||+|||++|++||   |++|+||                      +++.   ++.++|
T Consensus       121 ~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~---Dikp~NI----------------------l~~~~~~~~~~kL  175 (327)
T 3lm5_A          121 LPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHL---DLKPQNI----------------------LLSSIYPLGDIKI  175 (327)
T ss_dssp             SSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCCGGGE----------------------EESCBTTBCCEEE
T ss_pred             HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecC---cCChHHE----------------------EEecCCCCCcEEE
Confidence            43   568999999999999999999999999999   8888888                      6555   789999


Q ss_pred             eecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccC--
Q psy3347         154 ADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY--  231 (245)
Q Consensus       154 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~--  231 (245)
                      +|||++...... .......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.+.+..+....+......+  
T Consensus       176 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  254 (327)
T 3lm5_A          176 VDFGMSRKIGHA-CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSE  254 (327)
T ss_dssp             CCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred             eeCccccccCCc-cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCc
Confidence            999998753222 22344578999999999998899999999999999999999999999988887777776554433  


Q ss_pred             --CCCCChhHHhhhc
Q psy3347         232 --PRFLSLEAIAIMR  244 (245)
Q Consensus       232 --p~~~~~~~~~li~  244 (245)
                        +..+++++++||+
T Consensus       255 ~~~~~~~~~~~~li~  269 (327)
T 3lm5_A          255 ETFSSVSQLATDFIQ  269 (327)
T ss_dssp             TTTTTSCHHHHHHHH
T ss_pred             hhhcccCHHHHHHHH
Confidence              3568888888875


No 113
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=1e-37  Score=253.96  Aligned_cols=213  Identities=26%  Similarity=0.451  Sum_probs=164.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccc-hhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIA-RDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|++.  |+.||+|++....... ....+.+   .++++.++.++||||+++++++..++..++||||+++++|.+++
T Consensus        23 V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~---~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   97 (271)
T 3dtc_A           23 VYRAFWI--GDEVAVKAARHDPDEDISQTIENV---RQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL   97 (271)
T ss_dssp             EEEEEET--TEEEEEEEC----------CHHHH---HHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHH
T ss_pred             EEEEEEc--CCeEEEEEEecCCcccHHHHHHHH---HHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHh
Confidence            7889874  8999999997643221 1122333   34477788889999999999999999999999999999999999


Q ss_pred             hhcCCChHHHHHHHHHHHHHHHHhhhcC---ccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC--------C
Q psy3347          80 HADVFSEPRAVFYAACVVLGLQYLHESR---IIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT--------E  148 (245)
Q Consensus        80 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~--------~  148 (245)
                      +...+++..+..++.|++.||+|||++|   ++|+   |++|+||                      +++.        +
T Consensus        98 ~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~---dikp~Ni----------------------l~~~~~~~~~~~~  152 (271)
T 3dtc_A           98 SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHR---DLKSSNI----------------------LILQKVENGDLSN  152 (271)
T ss_dssp             TSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCS---CCSGGGE----------------------EESSCCSSSCCSS
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeec---CCchHHE----------------------EEecccccccccC
Confidence            8888999999999999999999999999   8899   8888888                      4443        6


Q ss_pred             CceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCc
Q psy3347         149 GYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDE  228 (245)
Q Consensus       149 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~  228 (245)
                      +.++|+|||++.......  .....|+..|+|||.+.+..++.++||||||+++|+|++|+.||.+.+.......+....
T Consensus       153 ~~~kl~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~  230 (271)
T 3dtc_A          153 KILKITDFGLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK  230 (271)
T ss_dssp             CCEEECCCCC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSC
T ss_pred             cceEEccCCccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCC
Confidence            789999999987532222  234568899999999988889999999999999999999999999888877777766554


Q ss_pred             c--cCCCCCChhHHhhhcC
Q psy3347         229 V--RYPRFLSLEAIAIMRR  245 (245)
Q Consensus       229 ~--~~p~~~~~~~~~li~~  245 (245)
                      .  +.|..+++++.++|++
T Consensus       231 ~~~~~~~~~~~~~~~li~~  249 (271)
T 3dtc_A          231 LALPIPSTCPEPFAKLMED  249 (271)
T ss_dssp             CCCCCCTTCCHHHHHHHHH
T ss_pred             CCCCCCcccCHHHHHHHHH
Confidence            3  4578899999998863


No 114
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=3.6e-38  Score=264.17  Aligned_cols=209  Identities=21%  Similarity=0.299  Sum_probs=165.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|++..+|+.||+|++.....     .+.+.+|   ++.++.+ +||||+++++++..++..++||||+ +++|.+++
T Consensus        25 V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E---~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~   95 (330)
T 2izr_A           25 LRLGKNLYTNEYVAIKLEPMKSR-----APQLHLE---YRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLF   95 (330)
T ss_dssp             EEEEEETTTTEEEEEEEEETTCS-----SCCHHHH---HHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHH
T ss_pred             EEEEEECCCCcEEEEEEeccccc-----hHHHHHH---HHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHH
Confidence            79999999999999999875421     1234444   5556667 8999999999999999999999999 88999998


Q ss_pred             h--hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCc-----eE
Q psy3347          80 H--ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY-----VK  152 (245)
Q Consensus        80 ~--~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~k  152 (245)
                      .  ...+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.     ++
T Consensus        96 ~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHr---Dlkp~Ni----------------------ll~~~~~~~~~~~k  150 (330)
T 2izr_A           96 DLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYR---DVKPENF----------------------LIGRPGNKTQQVIH  150 (330)
T ss_dssp             HHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EECCGGGTCTTSEE
T ss_pred             HHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc---CCCHHHe----------------------eeccCCCCCCceEE
Confidence            6  3679999999999999999999999999999   8888888                      7777666     99


Q ss_pred             EeecCCccCCCCCCC-------CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC---CHHHHHH
Q psy3347         153 IADFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD---DEEEVFD  222 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~---~~~~~~~  222 (245)
                      |+|||+++.......       ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||.+.   ...+...
T Consensus       151 l~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~  230 (330)
T 2izr_A          151 IIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQ  230 (330)
T ss_dssp             ECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHH
T ss_pred             EEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHH
Confidence            999999975322221       124567899999999999989999999999999999999999999874   3344444


Q ss_pred             HHhcCcccCC-----CCCChhHHhhhc
Q psy3347         223 SIVNDEVRYP-----RFLSLEAIAIMR  244 (245)
Q Consensus       223 ~~~~~~~~~p-----~~~~~~~~~li~  244 (245)
                      .+.....+.|     ..++ ++.++|+
T Consensus       231 ~i~~~~~~~~~~~~~~~~p-~~~~li~  256 (330)
T 2izr_A          231 KIGDTKRATPIEVLCENFP-EMATYLR  256 (330)
T ss_dssp             HHHHHHHHSCHHHHTTTCH-HHHHHHH
T ss_pred             HHHhhhccCCHHHHhccCh-HHHHHHH
Confidence            4433332222     2233 6666654


No 115
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=3.9e-37  Score=253.85  Aligned_cols=218  Identities=22%  Similarity=0.374  Sum_probs=176.5

Q ss_pred             CEeEEEecCCcEEEEEEeeccccc---chhhHHHHHHHHHHHHHHhhcC-CCceeeeeEEEeeCCeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDII---ARDEVESLLSEKRIFEVANTMR-HPFLVNLFACFQTEAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~~e~~~~~~l~~~~-h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|+++.+|+.||+|++......   ............++++.++.+. ||||+++++++..++..++||||+++++|.
T Consensus        33 V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  112 (298)
T 1phk_A           33 VRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF  112 (298)
T ss_dssp             EEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred             EEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHH
Confidence            799999999999999999764311   1111111222344566677774 999999999999999999999999999999


Q ss_pred             hhhhh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          77 MHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        77 ~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      +++.. ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|
T Consensus       113 ~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---dl~p~Ni----------------------l~~~~~~~kl~d  167 (298)
T 1phk_A          113 DYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHR---DLKPENI----------------------LLDDDMNIKLTD  167 (298)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECTTCCEEECC
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccC---CCCcceE----------------------EEcCCCcEEEec
Confidence            99854 578999999999999999999999999999   8999898                      888899999999


Q ss_pred             cCCccCCCCCCCCCCcccCCCCcccccccc------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcc
Q psy3347         156 FGLCKEGMGFGDRTGTFCGTPEFLAPEVLT------ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEV  229 (245)
Q Consensus       156 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~  229 (245)
                      ||++..... ........++..|+|||.+.      ...++.++||||||+++|+|++|..||.+.+..+....+..+..
T Consensus       168 fg~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  246 (298)
T 1phk_A          168 FGFSCQLDP-GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY  246 (298)
T ss_dssp             CTTCEECCT-TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             ccchhhcCC-CcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCc
Confidence            999875322 22334557889999999985      34678899999999999999999999998888888777777655


Q ss_pred             cCC----CCCChhHHhhhc
Q psy3347         230 RYP----RFLSLEAIAIMR  244 (245)
Q Consensus       230 ~~p----~~~~~~~~~li~  244 (245)
                      .++    ..+++++.+||+
T Consensus       247 ~~~~~~~~~~~~~l~~li~  265 (298)
T 1phk_A          247 QFGSPEWDDYSDTVKDLVS  265 (298)
T ss_dssp             CCCTTTGGGSCHHHHHHHH
T ss_pred             ccCcccccccCHHHHHHHH
Confidence            443    357888888875


No 116
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=3.8e-38  Score=277.72  Aligned_cols=212  Identities=26%  Similarity=0.420  Sum_probs=177.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.++.+++.||||+++....    ..+.+.+   ++++++.++||||+++++++...+..++||||+++++|.++++
T Consensus       236 Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~---E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~  308 (495)
T 1opk_A          236 VYEGVWKKYSLTVAVKTLKEDTM----EVEEFLK---EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR  308 (495)
T ss_dssp             EEEEEEGGGTEEEEEEECCSSSS----CHHHHHH---HHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHH
T ss_pred             EEEEEEcCCCeEEEEEEecCccc----chHHHHH---HHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHH
Confidence            79999999999999999986431    2344444   4677888899999999999999999999999999999999986


Q ss_pred             h---cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          81 A---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        81 ~---~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      .   ..+++..+..++.|++.||+|||++||+||   |++|+||                      +++.++.+||+|||
T Consensus       309 ~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHr---Dlkp~NI----------------------ll~~~~~~kl~DFG  363 (495)
T 1opk_A          309 ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR---NLAARNC----------------------LVGENHLVKVADFG  363 (495)
T ss_dssp             HSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECGGGCEEECCTT
T ss_pred             hcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccC---CCChhhE----------------------EECCCCcEEEeecc
Confidence            4   358899999999999999999999999999   8999888                      78888999999999


Q ss_pred             CccCCCCCCC-CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-cccCCCC
Q psy3347         158 LCKEGMGFGD-RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND-EVRYPRF  234 (245)
Q Consensus       158 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~-~~~~p~~  234 (245)
                      +++....... ......++..|+|||.+.+..++.++||||||+++|||++ |..||.+.+..+....+..+ ..+.|..
T Consensus       364 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  443 (495)
T 1opk_A          364 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG  443 (495)
T ss_dssp             CEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTT
T ss_pred             cceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence            9985432221 1223345678999999988889999999999999999999 99999988877777766554 3356788


Q ss_pred             CChhHHhhhc
Q psy3347         235 LSLEAIAIMR  244 (245)
Q Consensus       235 ~~~~~~~li~  244 (245)
                      +++++.+||+
T Consensus       444 ~~~~l~~li~  453 (495)
T 1opk_A          444 CPEKVYELMR  453 (495)
T ss_dssp             CCHHHHHHHH
T ss_pred             CCHHHHHHHH
Confidence            9999999986


No 117
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=4.7e-37  Score=254.97  Aligned_cols=216  Identities=24%  Similarity=0.383  Sum_probs=165.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.+..+|+.||+|++...........+.+.+   ++..++.++||||+++++++...+..+++|||+++++|.+++.
T Consensus        48 Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~---E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  124 (310)
T 2wqm_A           48 VYRAACLLDGVPVALKKVQIFDLMDAKARADCIK---EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIK  124 (310)
T ss_dssp             EEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHH---HHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHH
T ss_pred             EEEEEEcCCCceEEEEeeehhhccCHHHHHHHHH---HHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHH
Confidence            7999999999999999998644333334444444   4777888999999999999999999999999999999998885


Q ss_pred             h-----cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          81 A-----DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        81 ~-----~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      .     ..+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.++|+|
T Consensus       125 ~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~---dl~p~NI----------------------l~~~~~~~kl~D  179 (310)
T 2wqm_A          125 HFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHR---DIKPANV----------------------FITATGVVKLGD  179 (310)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EECTTSCEEECC
T ss_pred             HhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCC---CCcHHHE----------------------EEcCCCCEEEEe
Confidence            2     458999999999999999999999999999   8999998                      888899999999


Q ss_pred             cCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHhcCccc-C-
Q psy3347         156 FGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD--DEEEVFDSIVNDEVR-Y-  231 (245)
Q Consensus       156 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~--~~~~~~~~~~~~~~~-~-  231 (245)
                      ||++..............++..|+|||.+.+..++.++||||||+++|+|++|..||.+.  ........+.....+ . 
T Consensus       180 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  259 (310)
T 2wqm_A          180 LGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLP  259 (310)
T ss_dssp             C------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCC
T ss_pred             ccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCc
Confidence            999875433333334557889999999998888999999999999999999999999754  334455555544332 2 


Q ss_pred             CCCCChhHHhhhc
Q psy3347         232 PRFLSLEAIAIMR  244 (245)
Q Consensus       232 p~~~~~~~~~li~  244 (245)
                      +..+++++.+||+
T Consensus       260 ~~~~~~~l~~li~  272 (310)
T 2wqm_A          260 SDHYSEELRQLVN  272 (310)
T ss_dssp             TTTSCHHHHHHHH
T ss_pred             ccccCHHHHHHHH
Confidence            3678888988875


No 118
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=2.3e-37  Score=257.21  Aligned_cols=211  Identities=26%  Similarity=0.437  Sum_probs=176.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.+..+|+.||+|++....     ..+.+.+   ++..++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        45 Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~---e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  116 (314)
T 3com_A           45 VYKAIHKETGQIVAIKQVPVES-----DLQEIIK---EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR  116 (314)
T ss_dssp             EEEEEETTTCCEEEEEEEETTS-----CCHHHHH---HHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHH
T ss_pred             EEEEEECCCCCEEEEEecCchH-----HHHHHHH---HHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHH
Confidence            7999999999999999997542     1233433   4677888999999999999999999999999999999999885


Q ss_pred             --hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 --ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 --~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                        ...+++..+..++.|++.||.|||+.|++|+   |++|+||                      +++.++.++|+|||+
T Consensus       117 ~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~---dl~p~Ni----------------------l~~~~~~~kl~dfg~  171 (314)
T 3com_A          117 LRNKTLTEDEIATILQSTLKGLEYLHFMRKIHR---DIKAGNI----------------------LLNTEGHAKLADFGV  171 (314)
T ss_dssp             HHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTCCEEECCCTT
T ss_pred             hcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCC---CcCHHHE----------------------EECCCCCEEEeeccc
Confidence              4578999999999999999999999999999   9999998                      888889999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcc---cCCCCC
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEV---RYPRFL  235 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~---~~p~~~  235 (245)
                      +..............|+..|+|||.+.+..++.++||||||+++|+|++|+.||...........+.....   ..|..+
T Consensus       172 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (314)
T 3com_A          172 AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELW  251 (314)
T ss_dssp             CEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGS
T ss_pred             chhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccC
Confidence            87543333334456788999999999888899999999999999999999999988777665555544322   235567


Q ss_pred             ChhHHhhhc
Q psy3347         236 SLEAIAIMR  244 (245)
Q Consensus       236 ~~~~~~li~  244 (245)
                      ++++.+||+
T Consensus       252 ~~~l~~li~  260 (314)
T 3com_A          252 SDNFTDFVK  260 (314)
T ss_dssp             CHHHHHHHH
T ss_pred             CHHHHHHHH
Confidence            888888875


No 119
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9.1e-38  Score=263.44  Aligned_cols=197  Identities=26%  Similarity=0.430  Sum_probs=160.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchh--hHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARD--EVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|++..+|+.||+|++.........  ..+.+   .+++++++.++||||+++++++...+..++||||+++ +|..+
T Consensus        26 Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~---~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~  101 (346)
T 1ua2_A           26 VYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTA---LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVI  101 (346)
T ss_dssp             EEEEECSSCCSEEEEEEC------------CTHH---HHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHH
T ss_pred             EEEEEECCCCcEEEEEEEecCCcchhhhhhhHHH---HHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHH
Confidence            799999999999999999754321111  11223   3457778889999999999999999999999999986 78777


Q ss_pred             hhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeec
Q psy3347          79 IHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADF  156 (245)
Q Consensus        79 ~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df  156 (245)
                      +..  ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.+||+||
T Consensus       102 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~---Dlkp~Ni----------------------l~~~~~~~kl~Df  156 (346)
T 1ua2_A          102 IKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR---DLKPNNL----------------------LLDENGVLKLADF  156 (346)
T ss_dssp             HTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EECTTCCEEECCC
T ss_pred             HHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECC---CCCHHHE----------------------EEcCCCCEEEEec
Confidence            754  358899999999999999999999999999   9999999                      8888999999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN  226 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~  226 (245)
                      |+++.............+|+.|+|||.+.+. .++.++|||||||++|+|++|.+||.+.+..+....+..
T Consensus       157 g~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~  227 (346)
T 1ua2_A          157 GLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFE  227 (346)
T ss_dssp             GGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             ccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            9997644433344556789999999999764 578999999999999999999999999888777776643


No 120
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=1.1e-37  Score=255.91  Aligned_cols=212  Identities=25%  Similarity=0.409  Sum_probs=177.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.++.+++.||+|++....    ...+.+.+   +++.++.++||||+++++++..++..++||||+++++|.+++.
T Consensus        29 V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~---E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~  101 (288)
T 3kfa_A           29 VYEGVWKKYSLTVAVKTLKEDT----MEVEEFLK---EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR  101 (288)
T ss_dssp             EEEEEEGGGTEEEEEEEECSCS----THHHHHHH---HHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHH
T ss_pred             EEEeEecCCCEEEEEEecCcCH----HHHHHHHH---HHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHH
Confidence            7999999999999999997542    22344444   4677888899999999999999999999999999999999985


Q ss_pred             h---cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          81 A---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        81 ~---~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      .   ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||
T Consensus       102 ~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~---dikp~Ni----------------------l~~~~~~~~l~Dfg  156 (288)
T 3kfa_A          102 ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR---DLAARNC----------------------LVGENHLVKVADFG  156 (288)
T ss_dssp             HCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCS---CCSGGGE----------------------EECGGGCEEECCCC
T ss_pred             hcccCCccHhHHHHHHHHHHHHHHHHHHCCccCC---CCCcceE----------------------EEcCCCCEEEccCc
Confidence            4   358999999999999999999999999999   8999888                      77888899999999


Q ss_pred             CccCCCCCCC-CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-cccCCCC
Q psy3347         158 LCKEGMGFGD-RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND-EVRYPRF  234 (245)
Q Consensus       158 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~-~~~~p~~  234 (245)
                      ++........ ......++..|+|||.+.+..++.++||||||+++|+|++ |..||.+.+.......+... ....|..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T 3kfa_A          157 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG  236 (288)
T ss_dssp             GGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTT
T ss_pred             cceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCC
Confidence            9875433221 1223445678999999988889999999999999999999 99999988877777766554 3456788


Q ss_pred             CChhHHhhhc
Q psy3347         235 LSLEAIAIMR  244 (245)
Q Consensus       235 ~~~~~~~li~  244 (245)
                      +++++.+||+
T Consensus       237 ~~~~l~~li~  246 (288)
T 3kfa_A          237 CPEKVYELMR  246 (288)
T ss_dssp             CCHHHHHHHH
T ss_pred             CCHHHHHHHH
Confidence            9999998886


No 121
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=1.1e-37  Score=260.18  Aligned_cols=216  Identities=21%  Similarity=0.352  Sum_probs=163.1

Q ss_pred             CEeEEEecCCc---EEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeE------EEEEeecc
Q psy3347           1 VILSQYRNTGE---YFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHV------CFVMEYAA   71 (245)
Q Consensus         1 V~~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~------~lv~e~~~   71 (245)
                      ||+|+++.+++   .||+|+++..... ....+.+   .++++.++.++||||+++++++...+..      +++|||+.
T Consensus        39 Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~---~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~  114 (323)
T 3qup_A           39 VREAQLKQEDGSFVKVAVKMLKADIIA-SSDIEEF---LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMK  114 (323)
T ss_dssp             EEEEEC-------CEEEEEEC-------CHHHHHH---HHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCT
T ss_pred             EEEEEEcccCCcceeEEEEEecccccC-HHHHHHH---HHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEecc
Confidence            79999888775   8999999764322 2233444   4457788899999999999999876654      99999999


Q ss_pred             CCchhhhhhhc-------CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccc
Q psy3347          72 GGDLMMHIHAD-------VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTV  144 (245)
Q Consensus        72 ~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~  144 (245)
                      +++|.+++...       .+++..+..++.|++.||+|||++|++|+   |+||+||                      +
T Consensus       115 ~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~---Dikp~NI----------------------l  169 (323)
T 3qup_A          115 HGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHR---DLAARNC----------------------M  169 (323)
T ss_dssp             TCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE----------------------E
T ss_pred             CCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccC---CCCcceE----------------------E
Confidence            99999888432       58899999999999999999999999999   9999999                      8


Q ss_pred             cCCCCceEEeecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy3347         145 NDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVF  221 (245)
Q Consensus       145 ~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~  221 (245)
                      ++.++.+||+|||++........  ......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+..
T Consensus       170 i~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~  249 (323)
T 3qup_A          170 LAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY  249 (323)
T ss_dssp             ECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH
T ss_pred             EcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH
Confidence            88899999999999875322211  1223345678999999988889999999999999999999 99999998888888


Q ss_pred             HHHhcCc-ccCCCCCChhHHhhhcC
Q psy3347         222 DSIVNDE-VRYPRFLSLEAIAIMRR  245 (245)
Q Consensus       222 ~~~~~~~-~~~p~~~~~~~~~li~~  245 (245)
                      ..+..+. ...|..+++++.+||++
T Consensus       250 ~~~~~~~~~~~~~~~~~~l~~li~~  274 (323)
T 3qup_A          250 NYLIGGNRLKQPPECMEEVYDLMYQ  274 (323)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             HHHhcCCCCCCCCccCHHHHHHHHH
Confidence            8776654 45678899999998863


No 122
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=4.3e-38  Score=266.18  Aligned_cols=214  Identities=27%  Similarity=0.468  Sum_probs=169.3

Q ss_pred             CEeEE-----EecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCC-eEEEEEeeccCC
Q psy3347           1 VILSQ-----YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEA-HVCFVMEYAAGG   73 (245)
Q Consensus         1 V~~a~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~-~~~lv~e~~~~~   73 (245)
                      ||+|+     +..+++.||+|+++...  .....+.+.+|   ++.++.+ +||||+++++++...+ ..++||||+++|
T Consensus        38 Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E---~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g  112 (359)
T 3vhe_A           38 VIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSE---LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG  112 (359)
T ss_dssp             EEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHH---HHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTE
T ss_pred             EEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHH---HHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCC
Confidence            78998     55677999999997642  22333445555   5566666 7999999999997754 589999999999


Q ss_pred             chhhhhhhcC-------------------------------------------------------------------CCh
Q psy3347          74 DLMMHIHADV-------------------------------------------------------------------FSE   86 (245)
Q Consensus        74 ~L~~~~~~~~-------------------------------------------------------------------l~~   86 (245)
                      +|.++++...                                                                   +++
T Consensus       113 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  192 (359)
T 3vhe_A          113 NLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTL  192 (359)
T ss_dssp             EHHHHHHTTTTSBCSCC------------------------------------------------------CTTTTCBCH
T ss_pred             cHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCH
Confidence            9999885421                                                                   788


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCccCCCCCC
Q psy3347          87 PRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFG  166 (245)
Q Consensus        87 ~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~  166 (245)
                      ..+..++.|++.||+|||++||+|+   |+||+||                      +++.++.++|+|||++.......
T Consensus       193 ~~~~~~~~ql~~aL~~LH~~~ivH~---Dikp~NI----------------------ll~~~~~~kl~Dfg~a~~~~~~~  247 (359)
T 3vhe_A          193 EHLICYSFQVAKGMEFLASRKCIHR---DLAARNI----------------------LLSEKNVVKICDFGLARDIYKDP  247 (359)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE----------------------EECGGGCEEECCCGGGSCTTSCT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccC---CCChhhE----------------------EEcCCCcEEEEeccceeeecccc
Confidence            8999999999999999999999999   9999998                      78888999999999987542222


Q ss_pred             C--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHH-HHHhcC-cccCCCCCChhHHh
Q psy3347         167 D--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVF-DSIVND-EVRYPRFLSLEAIA  241 (245)
Q Consensus       167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~-~~~~~~-~~~~p~~~~~~~~~  241 (245)
                      .  ......+|..|+|||.+.+..++.++||||||+++|+|++ |+.||.+....+.. ..+... ....|..+++++.+
T Consensus       248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  327 (359)
T 3vhe_A          248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ  327 (359)
T ss_dssp             TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHH
T ss_pred             cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence            2  2334567888999999988889999999999999999998 99999877644333 333333 34567889999999


Q ss_pred             hhc
Q psy3347         242 IMR  244 (245)
Q Consensus       242 li~  244 (245)
                      +|+
T Consensus       328 li~  330 (359)
T 3vhe_A          328 TML  330 (359)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            885


No 123
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=3.8e-38  Score=263.47  Aligned_cols=195  Identities=23%  Similarity=0.417  Sum_probs=155.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++.....  ......+   .+++++++.++||||+++++++...+..++||||+++ +|.+++.
T Consensus        18 V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~---~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~   91 (324)
T 3mtl_A           18 VYKGKSKLTDNLVALKEIRLEHE--EGAPCTA---IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLD   91 (324)
T ss_dssp             EEEEEETTTCCEEEEEEECC--------CCCC---CCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHH
T ss_pred             EEEEEECCCCcEEEEEEEecccc--cccchhH---HHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccccc-CHHHHHH
Confidence            79999999999999999975421  1111122   2347778899999999999999999999999999975 8887775


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  ..+++..+..++.|++.||+|||++||+|+   |++|+||                      +++.++.+||+|||+
T Consensus        92 ~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~---Dikp~NI----------------------l~~~~~~~kl~Dfg~  146 (324)
T 3mtl_A           92 DCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHR---DLKPQNL----------------------LINERGELKLADFGL  146 (324)
T ss_dssp             HTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEES---SCCGGGE----------------------EECTTCCEEECSSSE
T ss_pred             hcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCC---CcCHHHE----------------------EECCCCCEEEccCcc
Confidence            3  458999999999999999999999999999   9999999                      888899999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN  226 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~  226 (245)
                      +..............++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+....+..
T Consensus       147 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~  215 (324)
T 3mtl_A          147 ARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFR  215 (324)
T ss_dssp             EECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            8754333333445578999999999976 5689999999999999999999999999888777766644


No 124
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=1.7e-37  Score=270.65  Aligned_cols=207  Identities=25%  Similarity=0.457  Sum_probs=171.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC-eEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA-HVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~-~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|.+.  |+.||||+++...     ..+.+.+|   +.+++.++||||+++++++.... ..++||||+++|+|.+++
T Consensus       209 V~~~~~~--~~~vavK~~~~~~-----~~~~~~~E---~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l  278 (450)
T 1k9a_A          209 VMLGDYR--GNKVAVKCIKNDA-----TAQAFLAE---ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL  278 (450)
T ss_dssp             EEEEEET--TEEEEEEEESSCT-----TSHHHHHH---HHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHH
T ss_pred             EEEEEec--CCeEEEEEeCCch-----HHHHHHHH---HHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHH
Confidence            7888775  8899999998642     22344444   67788999999999999987654 799999999999999999


Q ss_pred             hhc---CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeec
Q psy3347          80 HAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADF  156 (245)
Q Consensus        80 ~~~---~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df  156 (245)
                      +..   .+++..+..++.|++.||+|||++|++||   |++|+||                      +++.++.+||+||
T Consensus       279 ~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHr---Dlkp~Ni----------------------ll~~~~~~kl~Df  333 (450)
T 1k9a_A          279 RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR---DLAARNV----------------------LVSEDNVAKVSDF  333 (450)
T ss_dssp             HHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCCGGGE----------------------EECTTSCEEECCC
T ss_pred             HhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC---CCCHhhE----------------------EECCCCCEEEeeC
Confidence            642   36889999999999999999999999999   9999998                      8888999999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-cccCCCC
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND-EVRYPRF  234 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~-~~~~p~~  234 (245)
                      |+++.....   .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.+.+..+....+..+ ..+.|..
T Consensus       334 G~a~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~  410 (450)
T 1k9a_A          334 GLTKEASST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG  410 (450)
T ss_dssp             TTCEECC---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTT
T ss_pred             CCccccccc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCc
Confidence            998743221   223356788999999999999999999999999999998 99999988877777777665 3456889


Q ss_pred             CChhHHhhhcC
Q psy3347         235 LSLEAIAIMRR  245 (245)
Q Consensus       235 ~~~~~~~li~~  245 (245)
                      +++++.+||++
T Consensus       411 ~~~~l~~li~~  421 (450)
T 1k9a_A          411 CPPAVYDVMKN  421 (450)
T ss_dssp             CCHHHHHHHHH
T ss_pred             CCHHHHHHHHH
Confidence            99999999863


No 125
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=1.7e-37  Score=259.72  Aligned_cols=214  Identities=25%  Similarity=0.445  Sum_probs=173.7

Q ss_pred             CEeEEEecCCcEE--EEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNTGEYF--AIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~~~~v--aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|+++.+|+.+  |+|.++...  .....+.+.+   +++.++.+ +||||+++++++...+..++||||+++++|.+
T Consensus        41 Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~---E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  115 (327)
T 1fvr_A           41 VLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAG---ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD  115 (327)
T ss_dssp             EEEEEEEETTEEEEEEEEEEECC--------CHHHH---HHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHH
T ss_pred             EEEEEEccCCcccceeeeeecccc--chHHHHHHHH---HHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHH
Confidence            7999999999866  999887532  2222334444   46778888 89999999999999999999999999999999


Q ss_pred             hhhhc-----------------CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccch
Q psy3347          78 HIHAD-----------------VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEI  140 (245)
Q Consensus        78 ~~~~~-----------------~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~  140 (245)
                      ++...                 .+++..+..++.|++.||+|||++|++|+   |++|+||                   
T Consensus       116 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~---dlkp~NI-------------------  173 (327)
T 1fvr_A          116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR---DLAARNI-------------------  173 (327)
T ss_dssp             HHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE-------------------
T ss_pred             HHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCC---CCccceE-------------------
Confidence            88543                 58999999999999999999999999999   9999888                   


Q ss_pred             hccccCCCCceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHH
Q psy3347         141 KLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEE  219 (245)
Q Consensus       141 ~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~  219 (245)
                         +++.++.+||+|||+++..... .......++..|+|||.+.+..++.++||||||+++|+|++ |..||.+.+..+
T Consensus       174 ---l~~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~  249 (327)
T 1fvr_A          174 ---LVGENYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE  249 (327)
T ss_dssp             ---EECGGGCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             ---EEcCCCeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH
Confidence               7788899999999998742211 12233456778999999988889999999999999999998 999999988888


Q ss_pred             HHHHHhcC-cccCCCCCChhHHhhhcC
Q psy3347         220 VFDSIVND-EVRYPRFLSLEAIAIMRR  245 (245)
Q Consensus       220 ~~~~~~~~-~~~~p~~~~~~~~~li~~  245 (245)
                      ....+..+ ....|..+++++.+||++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~l~~li~~  276 (327)
T 1fvr_A          250 LYEKLPQGYRLEKPLNCDDEVYDLMRQ  276 (327)
T ss_dssp             HHHHGGGTCCCCCCTTBCHHHHHHHHH
T ss_pred             HHHHhhcCCCCCCCCCCCHHHHHHHHH
Confidence            88777665 335677889999998863


No 126
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=2.4e-37  Score=251.50  Aligned_cols=211  Identities=21%  Similarity=0.342  Sum_probs=174.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++ +++.||+|+++.....    .+.+.+   +++.++.++||||+++++++..++..++||||+++++|.+++.
T Consensus        24 V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~---E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   95 (268)
T 3sxs_A           24 VKLGKWK-GQYDVAVKMIKEGSMS----EDEFFQ---EAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLR   95 (268)
T ss_dssp             EEEEEET-TTEEEEEEEECBTTBC----HHHHHH---HHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHH
T ss_pred             EEEEEec-CceeEEEEEeccCCCc----HHHHHH---HHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHH
Confidence            7899776 5778999999864322    233433   4677888899999999999999999999999999999999885


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||+
T Consensus        96 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~---dikp~Ni----------------------l~~~~~~~~l~Dfg~  150 (268)
T 3sxs_A           96 SHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR---DLAARNC----------------------LVDRDLCVKVSDFGM  150 (268)
T ss_dssp             HHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEES---SCSGGGE----------------------EECTTCCEEECCTTC
T ss_pred             HcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC---CcCcceE----------------------EECCCCCEEEccCcc
Confidence            4  358999999999999999999999999999   9999998                      888899999999999


Q ss_pred             ccCCCCCCC-CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCcc-cCCCCC
Q psy3347         159 CKEGMGFGD-RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEV-RYPRFL  235 (245)
Q Consensus       159 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~~-~~p~~~  235 (245)
                      +........ ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||...+..+....+..... ..|..+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  230 (268)
T 3sxs_A          151 TRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLA  230 (268)
T ss_dssp             EEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTS
T ss_pred             ceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcC
Confidence            875332221 1223345667999999988889999999999999999999 9999998888888777766544 457778


Q ss_pred             ChhHHhhhc
Q psy3347         236 SLEAIAIMR  244 (245)
Q Consensus       236 ~~~~~~li~  244 (245)
                      ++++.++|+
T Consensus       231 ~~~l~~li~  239 (268)
T 3sxs_A          231 SDTIYQIMY  239 (268)
T ss_dssp             CHHHHHHHH
T ss_pred             hHHHHHHHH
Confidence            888888875


No 127
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=2.6e-37  Score=257.74  Aligned_cols=214  Identities=20%  Similarity=0.316  Sum_probs=176.7

Q ss_pred             CEeEEEe-----cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCch
Q psy3347           1 VILSQYR-----NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L   75 (245)
                      ||+|.++     .+++.||+|++....  .......+   .+++..++.++||||+++++++...+..++||||+++++|
T Consensus        41 Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~---~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  115 (322)
T 1p4o_A           41 VYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEF---LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL  115 (322)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHH---HHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred             EEeeeecCccCCCCceEEEEEeccccc--CHHHHHHH---HHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcH
Confidence            7888887     468899999997542  22222333   3457888999999999999999999999999999999999


Q ss_pred             hhhhhh-----------cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccc
Q psy3347          76 MMHIHA-----------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTV  144 (245)
Q Consensus        76 ~~~~~~-----------~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~  144 (245)
                      .+++..           ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +
T Consensus       116 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~---dikp~NI----------------------l  170 (322)
T 1p4o_A          116 KSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR---DLAARNC----------------------M  170 (322)
T ss_dssp             HHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCS---CCSGGGE----------------------E
T ss_pred             HHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccC---CCccceE----------------------E
Confidence            998853           356889999999999999999999999999   9999998                      8


Q ss_pred             cCCCCceEEeecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy3347         145 NDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVF  221 (245)
Q Consensus       145 ~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~  221 (245)
                      ++.++.+||+|||++........  ......++..|+|||.+.+..++.++||||||+++|+|++ |..||.+.+..+..
T Consensus       171 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~  250 (322)
T 1p4o_A          171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL  250 (322)
T ss_dssp             ECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH
T ss_pred             EcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHH
Confidence            88899999999999874322211  1223355778999999988889999999999999999999 89999998888888


Q ss_pred             HHHhcCcc-cCCCCCChhHHhhhc
Q psy3347         222 DSIVNDEV-RYPRFLSLEAIAIMR  244 (245)
Q Consensus       222 ~~~~~~~~-~~p~~~~~~~~~li~  244 (245)
                      ..+..+.. ..|..+++++.+||+
T Consensus       251 ~~~~~~~~~~~~~~~~~~l~~li~  274 (322)
T 1p4o_A          251 RFVMEGGLLDKPDNCPDMLFELMR  274 (322)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             HHHHcCCcCCCCCCCCHHHHHHHH
Confidence            87766543 467889999998886


No 128
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=1.4e-37  Score=255.51  Aligned_cols=208  Identities=18%  Similarity=0.298  Sum_probs=165.4

Q ss_pred             CEeEEEecCC-------cEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCC
Q psy3347           1 VILSQYRNTG-------EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG   73 (245)
Q Consensus         1 V~~a~~~~~~-------~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~   73 (245)
                      ||+|+++.++       +.||+|++....   ....+.+.   ++++.++.++||||+++++++..++..++||||++++
T Consensus        24 V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~---~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   97 (289)
T 4fvq_A           24 IFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFF---EAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFG   97 (289)
T ss_dssp             EEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHH---HHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTC
T ss_pred             EEEEEEecccccccccchhhhhhhccccc---HHHHHHHH---HHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCC
Confidence            7999999887       479999997542   22233444   4477788999999999999999999999999999999


Q ss_pred             chhhhhhhc--CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCc-
Q psy3347          74 DLMMHIHAD--VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY-  150 (245)
Q Consensus        74 ~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  150 (245)
                      +|.+++...  .+++..+..++.|++.||+|||++|++||   |+||+||                      +++.++. 
T Consensus        98 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~  152 (289)
T 4fvq_A           98 SLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHG---NVCAKNI----------------------LLIREEDR  152 (289)
T ss_dssp             BHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EEEECCBG
T ss_pred             CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECC---CcCcceE----------------------EEecCCcc
Confidence            999999643  38999999999999999999999999999   8888888                      5555554 


Q ss_pred             -------eEEeecCCccCCCCCCCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy3347         151 -------VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVF  221 (245)
Q Consensus       151 -------~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~  221 (245)
                             ++|+|||++.....    .....++..|+|||.+.+ ..++.++||||||+++|+|++ +.+||...+.....
T Consensus       153 ~~~~~~~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~  228 (289)
T 4fvq_A          153 KTGNPPFIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL  228 (289)
T ss_dssp             GGTBCCEEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred             cccccceeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH
Confidence                   99999999864321    223457888999999987 678999999999999999999 55666555544443


Q ss_pred             HHHhcCcccCCCCCChhHHhhhc
Q psy3347         222 DSIVNDEVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       222 ~~~~~~~~~~p~~~~~~~~~li~  244 (245)
                       .........|...++++.+||+
T Consensus       229 -~~~~~~~~~~~~~~~~l~~li~  250 (289)
T 4fvq_A          229 -QFYEDRHQLPAPKAAELANLIN  250 (289)
T ss_dssp             -HHHHTTCCCCCCSSCTTHHHHH
T ss_pred             -HHhhccCCCCCCCCHHHHHHHH
Confidence             3444455667777888888775


No 129
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=3.2e-37  Score=263.51  Aligned_cols=188  Identities=20%  Similarity=0.377  Sum_probs=155.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee---------------------
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT---------------------   59 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~---------------------   59 (245)
                      ||+|++..+|+.||+|++.......          .+++++++.++||||++++++|..                     
T Consensus        23 V~~a~~~~~~~~vAiK~~~~~~~~~----------~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (383)
T 3eb0_A           23 VCEVFDIESGKRFALKKVLQDPRYK----------NRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGK   92 (383)
T ss_dssp             EEEEEETTTCCEEEEEEEECCTTSC----------CHHHHHHTTCCCTTBCCEEEEEEEC--------------------
T ss_pred             EEEEEECCCCCEEEEEEEecCcchH----------HHHHHHHHHcCCCCccchhheeeecCccccccccccccccccccc
Confidence            7999999999999999997542111          234778889999999999999844                     


Q ss_pred             -----------------CCeEEEEEeeccCCchhhhhh-----hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCC
Q psy3347          60 -----------------EAHVCFVMEYAAGGDLMMHIH-----ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNIT  117 (245)
Q Consensus        60 -----------------~~~~~lv~e~~~~~~L~~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~  117 (245)
                                       ..+.++||||+++ +|.+.+.     ...+++..++.++.|++.||+|||++||+||   |+|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~---Dik  168 (383)
T 3eb0_A           93 NNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHR---DIK  168 (383)
T ss_dssp             -----------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECS---CCC
T ss_pred             ccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccC---ccC
Confidence                             3358999999985 7665553     3578999999999999999999999999999   899


Q ss_pred             HHHHHHHHHHhhhccccCcccchhccccC-CCCceEEeecCCccCCCCCCCCCCcccCCCCccccccccCC-CCCcchhH
Q psy3347         118 KEEIKRIEAKVQENYKVNSSQEIKLTVND-TEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET-SYTRAVDW  195 (245)
Q Consensus       118 ~~~ik~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv  195 (245)
                      |+||                      +++ .++.+||+|||+++..... .......++..|+|||.+.+. .++.++||
T Consensus       169 p~Ni----------------------l~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di  225 (383)
T 3eb0_A          169 PQNL----------------------LVNSKDNTLKLCDFGSAKKLIPS-EPSVAYICSRFYRAPELMLGATEYTPSIDL  225 (383)
T ss_dssp             GGGE----------------------EEETTTTEEEECCCTTCEECCTT-SCCCCCCCCSSCCCHHHHTTCSSCCTHHHH
T ss_pred             HHHE----------------------EEcCCCCcEEEEECCCCcccCCC-CCCcCcccCCCccCHHHhcCCCCCCcchhh
Confidence            9888                      665 5789999999999753222 234456789999999999775 48999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         196 WGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       196 wslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      |||||++|+|++|+.||.+.+..+....+.
T Consensus       226 wslG~il~ell~g~~pf~~~~~~~~~~~i~  255 (383)
T 3eb0_A          226 WSIGCVFGELILGKPLFSGETSIDQLVRII  255 (383)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             hhHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            999999999999999999988877776664


No 130
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=5.7e-37  Score=259.59  Aligned_cols=211  Identities=20%  Similarity=0.331  Sum_probs=159.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHh--hcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVAN--TMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~--~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|++..+|+.||+|+++...    ...+....|.+++..+.  .++||||+++++++...++.++|||++ +++|.++
T Consensus        51 V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~  125 (360)
T 3llt_A           51 VLLCQHIDNKKYYAVKVVRNIK----KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEI  125 (360)
T ss_dssp             EEEEEETTTCCEEEEEEECSCH----HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHH
T ss_pred             EEEEEECCCCeEEEEEEeccch----hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHH
Confidence            7999999999999999997431    22333444443333332  124999999999999999999999999 8899998


Q ss_pred             hhhc---CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccC--------cccchhccccCC
Q psy3347          79 IHAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVN--------SSQEIKLTVNDT  147 (245)
Q Consensus        79 ~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~--------~~~~~~~~~~~~  147 (245)
                      +...   .+++..+..++.|++.||+|||++||+||   |+||+||     ++.......        ...+........
T Consensus       126 ~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr---Dlkp~NI-----ll~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (360)
T 3llt_A          126 ITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHT---DLKPENI-----LLDDPYFEKSLITVRRVTDGKKIQIYRTK  197 (360)
T ss_dssp             HHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE-----EESCTTCCEEEEEEECTTTCCEEEEEEES
T ss_pred             HHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeC---CCCcccE-----EEccccccccccchhcccccccccccccC
Confidence            8643   48999999999999999999999999999   7777777     322110000        000000000123


Q ss_pred             CCceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC
Q psy3347         148 EGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVND  227 (245)
Q Consensus       148 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~  227 (245)
                      ++.+||+|||++.....   ......||..|+|||.+.+..++.++|||||||++|+|++|+.||.+.+..+....+...
T Consensus       198 ~~~~kl~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~  274 (360)
T 3llt_A          198 STGIKLIDFGCATFKSD---YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESI  274 (360)
T ss_dssp             CCCEEECCCTTCEETTS---CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             CCCEEEEeccCceecCC---CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHh
Confidence            78899999999975322   234567899999999999999999999999999999999999999988877777666543


No 131
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=4e-37  Score=259.81  Aligned_cols=196  Identities=23%  Similarity=0.364  Sum_probs=159.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee--------CCeEEEEEeeccC
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT--------EAHVCFVMEYAAG   72 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~--------~~~~~lv~e~~~~   72 (245)
                      ||+|+++.+|+.||+|++....... .....+.   +++++++.++||||+++++++..        .+..++||||+++
T Consensus        33 V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~---~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~  108 (351)
T 3mi9_A           33 VFKARHRKTGQKVALKKVLMENEKE-GFPITAL---REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH  108 (351)
T ss_dssp             EEEEEETTTCCEEEEEECCCSSCSS-SSCHHHH---HHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSE
T ss_pred             EEEEEECCCCCEEEEEEEecccccc-cchHHHH---HHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccCC
Confidence            7999999999999999997653222 1122333   44677888899999999999976        4578999999986


Q ss_pred             Cchhhhhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCc
Q psy3347          73 GDLMMHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY  150 (245)
Q Consensus        73 ~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (245)
                       +|...+..  ..+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.
T Consensus       109 -~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~---Dlkp~NI----------------------l~~~~~~  162 (351)
T 3mi9_A          109 -DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHR---DMKAANV----------------------LITRDGV  162 (351)
T ss_dssp             -EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECTTSC
T ss_pred             -CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCC---CCCHHHE----------------------EEcCCCC
Confidence             66665533  568999999999999999999999999999   9999999                      8888999


Q ss_pred             eEEeecCCccCCCC----CCCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         151 VKIADFGLCKEGMG----FGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       151 ~kl~Dfg~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      +||+|||++.....    .........||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.
T Consensus       163 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  242 (351)
T 3mi9_A          163 LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS  242 (351)
T ss_dssp             EEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             EEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            99999999874321    1122345578999999999976 458999999999999999999999999988877777765


Q ss_pred             c
Q psy3347         226 N  226 (245)
Q Consensus       226 ~  226 (245)
                      .
T Consensus       243 ~  243 (351)
T 3mi9_A          243 Q  243 (351)
T ss_dssp             H
T ss_pred             H
Confidence            4


No 132
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9.3e-38  Score=264.39  Aligned_cols=217  Identities=38%  Similarity=0.697  Sum_probs=173.2

Q ss_pred             CEeEEEe---cCCcEEEEEEeecccccc-hhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCch
Q psy3347           1 VILSQYR---NTGEYFAIKALKKGDIIA-RDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~---~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L   75 (245)
                      ||+|++.   .+|+.||+|+++...... ....+.+.+|   +++++.+ +||||+++++++...+..++||||+++++|
T Consensus        70 Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E---~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  146 (355)
T 1vzo_A           70 VFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTE---RQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL  146 (355)
T ss_dssp             EEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCH---HHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred             EEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHH---HHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCH
Confidence            7899884   589999999997643211 1122333334   4555555 699999999999999999999999999999


Q ss_pred             hhhhh-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          76 MMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        76 ~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      .+++. ...+++..+..++.|++.||.|||++||+||   |+||+||                      +++.++.+||+
T Consensus       147 ~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~kl~  201 (355)
T 1vzo_A          147 FTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYR---DIKLENI----------------------LLDSNGHVVLT  201 (355)
T ss_dssp             HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EECTTSCEEES
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC---CCCHHHE----------------------EECCCCcEEEe
Confidence            99885 4679999999999999999999999999999   9999999                      88889999999


Q ss_pred             ecCCccCCCCC-CCCCCcccCCCCccccccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHhcC
Q psy3347         155 DFGLCKEGMGF-GDRTGTFCGTPEFLAPEVLTE--TSYTRAVDWWGLGVLIFEMLVGESPFPGD----DEEEVFDSIVND  227 (245)
Q Consensus       155 Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~~g~~pf~~~----~~~~~~~~~~~~  227 (245)
                      |||+++..... .......+||..|+|||.+.+  ..++.++|||||||++|+|++|+.||...    ...+....+...
T Consensus       202 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~  281 (355)
T 1vzo_A          202 DFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS  281 (355)
T ss_dssp             CSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC
T ss_pred             eCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhcc
Confidence            99998753222 222345678999999999976  34788999999999999999999999643    345556666667


Q ss_pred             cccCCCCCChhHHhhhcC
Q psy3347         228 EVRYPRFLSLEAIAIMRR  245 (245)
Q Consensus       228 ~~~~p~~~~~~~~~li~~  245 (245)
                      ..++|..+++.+++||++
T Consensus       282 ~~~~~~~~~~~~~~li~~  299 (355)
T 1vzo_A          282 EPPYPQEMSALAKDLIQR  299 (355)
T ss_dssp             CCCCCTTSCHHHHHHHHH
T ss_pred             CCCCCcccCHHHHHHHHH
Confidence            777888999999998863


No 133
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=7.2e-37  Score=251.09  Aligned_cols=214  Identities=23%  Similarity=0.398  Sum_probs=167.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhh-HHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDE-VESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|++..+++.||+|++.......... .+.+....++++.++.++||||+++++++....  ++||||+++++|.+++
T Consensus        35 V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l  112 (287)
T 4f0f_A           35 VHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRL  112 (287)
T ss_dssp             EEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHH
T ss_pred             EEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCCHHHHH
Confidence            7999999999999999997644322211 111123345578888999999999999996665  6999999999998877


Q ss_pred             h--hcCCChHHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCc-----
Q psy3347          80 H--ADVFSEPRAVFYAACVVLGLQYLHESR--IIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY-----  150 (245)
Q Consensus        80 ~--~~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  150 (245)
                      .  ...+++..+..++.|++.||+|||++|  ++|+   |++|+||                      +++.++.     
T Consensus       113 ~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~---dikp~Ni----------------------l~~~~~~~~~~~  167 (287)
T 4f0f_A          113 LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHR---DLRSPNI----------------------FLQSLDENAPVC  167 (287)
T ss_dssp             HCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCS---CCSGGGE----------------------EESCCCTTCSCC
T ss_pred             hcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecC---CCCcceE----------------------EEeccCCCCcee
Confidence            4  346899999999999999999999999  9999   8888888                      6666665     


Q ss_pred             eEEeecCCccCCCCCCCCCCcccCCCCcccccccc--CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhc
Q psy3347         151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLT--ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE--EVFDSIVN  226 (245)
Q Consensus       151 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~--~~~~~~~~  226 (245)
                      ++|+|||+++...   .......|+..|+|||.+.  ...++.++||||||+++|+|++|+.||......  .....+..
T Consensus       168 ~kl~Dfg~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~  244 (287)
T 4f0f_A          168 AKVADFGLSQQSV---HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE  244 (287)
T ss_dssp             EEECCCTTCBCCS---SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHH
T ss_pred             EEeCCCCcccccc---ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhc
Confidence            9999999987422   2234567899999999994  455788999999999999999999999765433  33444433


Q ss_pred             C--cccCCCCCChhHHhhhc
Q psy3347         227 D--EVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       227 ~--~~~~p~~~~~~~~~li~  244 (245)
                      .  ....|..+++++.++|+
T Consensus       245 ~~~~~~~~~~~~~~l~~li~  264 (287)
T 4f0f_A          245 EGLRPTIPEDCPPRLRNVIE  264 (287)
T ss_dssp             SCCCCCCCTTSCHHHHHHHH
T ss_pred             cCCCCCCCcccCHHHHHHHH
Confidence            3  33467889999999886


No 134
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=3.7e-37  Score=252.35  Aligned_cols=211  Identities=22%  Similarity=0.372  Sum_probs=175.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.+. +++.||+|++......    .+.+.   ++++.++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        40 V~~~~~~-~~~~vavK~~~~~~~~----~~~~~---~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  111 (283)
T 3gen_A           40 VKYGKWR-GQYDVAIKMIKEGSMS----EDEFI---EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR  111 (283)
T ss_dssp             EEEEEET-TTEEEEEEEECTTSBC----HHHHH---HHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHH
T ss_pred             EEEEEEc-CCCeEEEEEecCCCCC----HHHHH---HHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHH
Confidence            6889776 6778999999865322    13333   44777888999999999999999999999999999999999985


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||+
T Consensus       112 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~---dikp~Ni----------------------li~~~~~~kl~Dfg~  166 (283)
T 3gen_A          112 EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR---DLAARNC----------------------LVNDQGVVKVSDFGL  166 (283)
T ss_dssp             CGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---SCSGGGE----------------------EECTTSCEEECSTTG
T ss_pred             HhccCCCHHHHHHHHHHHHHHHHHHHHCCccCC---CCccceE----------------------EEcCCCCEEEccccc
Confidence            4  579999999999999999999999999999   9999998                      888899999999999


Q ss_pred             ccCCCCCCC-CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-ccCCCCC
Q psy3347         159 CKEGMGFGD-RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VRYPRFL  235 (245)
Q Consensus       159 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~p~~~  235 (245)
                      +........ ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||...+..+....+.... ...|..+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  246 (283)
T 3gen_A          167 SRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA  246 (283)
T ss_dssp             GGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTC
T ss_pred             cccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcC
Confidence            875322111 1223345678999999988889999999999999999998 999999988888888887664 3457788


Q ss_pred             ChhHHhhhc
Q psy3347         236 SLEAIAIMR  244 (245)
Q Consensus       236 ~~~~~~li~  244 (245)
                      ++++.++|+
T Consensus       247 ~~~l~~li~  255 (283)
T 3gen_A          247 SEKVYTIMY  255 (283)
T ss_dssp             CHHHHHHHH
T ss_pred             CHHHHHHHH
Confidence            999988875


No 135
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=2.8e-37  Score=256.79  Aligned_cols=210  Identities=22%  Similarity=0.301  Sum_probs=160.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||||++....... ........+  +..+.+..+||||+++++++..++..++||||+ +++|.+++.
T Consensus        73 Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e--~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~  148 (311)
T 3p1a_A           73 VFKVRSKEDGRLYAVKRSMSPFRGP-KDRARKLAE--VGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCE  148 (311)
T ss_dssp             EEEEEETTTSCEEEEEEESSSCCSH-HHHHHHHHH--HHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHH
T ss_pred             EEEEEECCCCeEEEEEEecccccCh-HHHHHHHHH--HHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHH
Confidence            7999999999999999987543222 222222222  222334448999999999999999999999999 558877774


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  ..+++..+..++.|++.||+|||++||+|+   |+||+||                      +++.++.+||+|||+
T Consensus       149 ~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~---Dikp~NI----------------------ll~~~~~~kl~DFG~  203 (311)
T 3p1a_A          149 AWGASLPEAQVWGYLRDTLLALAHLHSQGLVHL---DVKPANI----------------------FLGPRGRCKLGDFGL  203 (311)
T ss_dssp             HHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECGGGCEEECCCTT
T ss_pred             hcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecC---CCCHHHE----------------------EECCCCCEEEcccee
Confidence            3  469999999999999999999999999999   9999998                      788889999999999


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcc--cCCCCCC
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEV--RYPRFLS  236 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~--~~p~~~~  236 (245)
                      +..... ........||+.|+|||.+.+ .++.++||||||+++|+|++|..|+.+...   ...+.....  .++..++
T Consensus       204 a~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~  278 (311)
T 3p1a_A          204 LVELGT-AGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGYLPPEFTAGLS  278 (311)
T ss_dssp             CEECC-------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTTCCCHHHHTTSC
T ss_pred             eeeccc-CCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhccCCCcccccCCC
Confidence            875322 222344568999999999876 689999999999999999999776654322   233333322  2457788


Q ss_pred             hhHHhhhc
Q psy3347         237 LEAIAIMR  244 (245)
Q Consensus       237 ~~~~~li~  244 (245)
                      +++++||+
T Consensus       279 ~~l~~li~  286 (311)
T 3p1a_A          279 SELRSVLV  286 (311)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88888875


No 136
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=3.9e-37  Score=258.27  Aligned_cols=214  Identities=26%  Similarity=0.462  Sum_probs=174.0

Q ss_pred             CEeEEEe-------cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccC
Q psy3347           1 VILSQYR-------NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAG   72 (245)
Q Consensus         1 V~~a~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~   72 (245)
                      ||+|++.       .+++.||+|++....  .....+.+.+|   ++.++.+ +||||+++++++...+..++||||+++
T Consensus        51 Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E---~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~  125 (334)
T 2pvf_A           51 VVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSE---MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK  125 (334)
T ss_dssp             EEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHH---HHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTT
T ss_pred             EEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHH---HHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCC
Confidence            7889875       467899999998642  22334444444   5666677 899999999999999999999999999


Q ss_pred             Cchhhhhhhc-----------------CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccC
Q psy3347          73 GDLMMHIHAD-----------------VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVN  135 (245)
Q Consensus        73 ~~L~~~~~~~-----------------~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~  135 (245)
                      ++|.+++...                 .+++..+..++.|++.||.|||++|++|+   |++|+||              
T Consensus       126 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~---Dlkp~NI--------------  188 (334)
T 2pvf_A          126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR---DLAARNV--------------  188 (334)
T ss_dssp             CBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE--------------
T ss_pred             CcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCC---CCccceE--------------
Confidence            9999998542                 37889999999999999999999999999   9999998              


Q ss_pred             cccchhccccCCCCceEEeecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q psy3347         136 SSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPF  212 (245)
Q Consensus       136 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf  212 (245)
                              +++.++.+||+|||++........  ......++..|+|||.+.+..++.++||||||+++|+|++ |..||
T Consensus       189 --------ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~  260 (334)
T 2pvf_A          189 --------LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY  260 (334)
T ss_dssp             --------EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             --------EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCc
Confidence                    888899999999999875332221  1233456778999999988889999999999999999999 99999


Q ss_pred             CCCCHHHHHHHHhcCc-ccCCCCCChhHHhhhc
Q psy3347         213 PGDDEEEVFDSIVNDE-VRYPRFLSLEAIAIMR  244 (245)
Q Consensus       213 ~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~  244 (245)
                      .+.+..+....+..+. ...|..+++++.++|+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  293 (334)
T 2pvf_A          261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMR  293 (334)
T ss_dssp             TTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHH
T ss_pred             CcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHH
Confidence            9988888877776654 4567889999998875


No 137
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=3.9e-37  Score=253.40  Aligned_cols=214  Identities=28%  Similarity=0.471  Sum_probs=168.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+++.||+|.+....   ....+.+.   +++..++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        38 Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~---~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  111 (295)
T 2clq_A           38 VYAGRDLSNQVRIAIKEIPERD---SRYSQPLH---EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR  111 (295)
T ss_dssp             EEEEEETTTCCEEEEEEEECCC---C---HHHH---HHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHH
T ss_pred             EEEEEECCCCeEEEEEEccCCc---hHHHHHHH---HHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHH
Confidence            7999999999999999997642   22223343   44677888999999999999999999999999999999999886


Q ss_pred             hc----CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC-CCceEEee
Q psy3347          81 AD----VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT-EGYVKIAD  155 (245)
Q Consensus        81 ~~----~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~kl~D  155 (245)
                      ..    .+++..+..++.|++.||+|||++|++|+   |++|+||                      +++. ++.++|+|
T Consensus       112 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---dl~p~Ni----------------------l~~~~~~~~kl~D  166 (295)
T 2clq_A          112 SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR---DIKGDNV----------------------LINTYSGVLKISD  166 (295)
T ss_dssp             HTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EEETTTCCEEECC
T ss_pred             hhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEcc---CCChhhE----------------------EEECCCCCEEEee
Confidence            43    45688889999999999999999999999   8888888                      6665 78999999


Q ss_pred             cCCccCCCCCCCCCCcccCCCCccccccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH--HhcCccc
Q psy3347         156 FGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETS--YTRAVDWWGLGVLIFEMLVGESPFPGDDEE-EVFDS--IVNDEVR  230 (245)
Q Consensus       156 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~el~~g~~pf~~~~~~-~~~~~--~~~~~~~  230 (245)
                      ||++..............|+..|+|||.+.+..  ++.++||||||+++|+|++|+.||...... .....  .......
T Consensus       167 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  246 (295)
T 2clq_A          167 FGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE  246 (295)
T ss_dssp             TTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCC
T ss_pred             cccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccc
Confidence            999875433333344567889999999997643  789999999999999999999999754322 22111  2233456


Q ss_pred             CCCCCChhHHhhhcC
Q psy3347         231 YPRFLSLEAIAIMRR  245 (245)
Q Consensus       231 ~p~~~~~~~~~li~~  245 (245)
                      +|..+++++.+||++
T Consensus       247 ~~~~~~~~~~~li~~  261 (295)
T 2clq_A          247 IPESMSAEAKAFILK  261 (295)
T ss_dssp             CCTTSCHHHHHHHHH
T ss_pred             ccccCCHHHHHHHHH
Confidence            678899999988863


No 138
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=3.5e-37  Score=267.08  Aligned_cols=192  Identities=25%  Similarity=0.421  Sum_probs=161.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc---CCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM---RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~---~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|++..+|+.||+|+++...    ...+.+.+|.+++..++..   +|+||+++++++...++.++|||++. ++|.+
T Consensus       113 V~~a~~~~~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~  187 (429)
T 3kvw_A          113 VVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLYE  187 (429)
T ss_dssp             EEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-CBHHH
T ss_pred             EEEEEECCCCcEEEEEEECCcc----chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-CCHHH
Confidence            7999999999999999997532    2234455565666655544   78899999999999999999999996 58888


Q ss_pred             hhhhc---CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCc--eE
Q psy3347          78 HIHAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY--VK  152 (245)
Q Consensus        78 ~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~k  152 (245)
                      ++...   .+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.  +|
T Consensus       188 ~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr---DlKp~NI----------------------Ll~~~~~~~vk  242 (429)
T 3kvw_A          188 LIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHC---DLKPENI----------------------LLKQQGRSGIK  242 (429)
T ss_dssp             HHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECS---CCSGGGE----------------------EESSTTSCCEE
T ss_pred             HHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC---CCCHHHe----------------------EEccCCCcceE
Confidence            77543   48999999999999999999999999999   9999998                      7777776  99


Q ss_pred             EeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         153 IADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      |+|||++....   ......+||..|+|||.+.+..++.++|||||||++|+|++|..||.+.+..+....+.
T Consensus       243 L~DFG~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~  312 (429)
T 3kvw_A          243 VIDFGSSCYEH---QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI  312 (429)
T ss_dssp             ECCCTTCEETT---CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             EeecccceecC---CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            99999987522   22345678999999999999999999999999999999999999999988777666554


No 139
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=2.3e-37  Score=253.48  Aligned_cols=213  Identities=25%  Similarity=0.382  Sum_probs=164.1

Q ss_pred             CEeEEEecC---CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNT---GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|++..+   +..||+|++....  .....+.+.   +++..++.++||||+++++++. ++..++||||+++++|.+
T Consensus        31 Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~---~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~  104 (281)
T 1mp8_A           31 VHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFL---QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRS  104 (281)
T ss_dssp             EEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHH---HHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHH
T ss_pred             EEEEEEecCCCCceEEEEEeccccC--CHHHHHHHH---HHHHHHHhCCCCccceEEEEEc-cCccEEEEecCCCCCHHH
Confidence            799988654   5579999987532  222233344   4477788899999999999984 567899999999999999


Q ss_pred             hhhhc--CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          78 HIHAD--VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        78 ~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      ++...  .+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.+||+|
T Consensus       105 ~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---dlkp~Ni----------------------l~~~~~~~kl~D  159 (281)
T 1mp8_A          105 FLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR---DIAARNV----------------------LVSSNDCVKLGD  159 (281)
T ss_dssp             HHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE----------------------EEEETTEEEECC
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc---cccHHHE----------------------EECCCCCEEECc
Confidence            98643  58999999999999999999999999999   9999998                      778889999999


Q ss_pred             cCCccCCCCCCC-CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-ccCC
Q psy3347         156 FGLCKEGMGFGD-RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VRYP  232 (245)
Q Consensus       156 fg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~p  232 (245)
                      ||++........ ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||.+....+....+..+. .+.|
T Consensus       160 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~  239 (281)
T 1mp8_A          160 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP  239 (281)
T ss_dssp             -------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC
T ss_pred             cccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCC
Confidence            999875432221 1223345678999999988889999999999999999997 999999888877777776654 4567


Q ss_pred             CCCChhHHhhhc
Q psy3347         233 RFLSLEAIAIMR  244 (245)
Q Consensus       233 ~~~~~~~~~li~  244 (245)
                      ..+++++.++|+
T Consensus       240 ~~~~~~l~~li~  251 (281)
T 1mp8_A          240 PNCPPTLYSLMT  251 (281)
T ss_dssp             TTCCHHHHHHHH
T ss_pred             CCCCHHHHHHHH
Confidence            889999999886


No 140
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=3.7e-37  Score=262.17  Aligned_cols=194  Identities=24%  Similarity=0.382  Sum_probs=153.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC------eEEEEEeeccCCc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA------HVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~------~~~lv~e~~~~~~   74 (245)
                      ||+|++..+|+.||+|++.... ......+.+   .+++.+++.++||||+++++++...+      ..++||||+++ +
T Consensus        41 V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~---~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~  115 (371)
T 2xrw_A           41 VCAAYDAILERNVAIKKLSRPF-QNQTHAKRA---YRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-N  115 (371)
T ss_dssp             EEEEEETTTTEEEEEEEEECTT-SSHHHHHHH---HHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-E
T ss_pred             EEEEEECCCCceEEEEEecccc-CChHHHHHH---HHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCCC-C
Confidence            7999999999999999998642 122223333   44577788899999999999997654      78999999975 6


Q ss_pred             hhhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          75 LMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        75 L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      |.+.+. ..+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+
T Consensus       116 l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~---Dlkp~NI----------------------l~~~~~~~kl~  169 (371)
T 2xrw_A          116 LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGIIHR---DLKPSNI----------------------VVKSDCTLKIL  169 (371)
T ss_dssp             HHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EECTTSCEEEC
T ss_pred             HHHHHh-hccCHHHHHHHHHHHHHHHHHHHHCCeecc---cCCHHHE----------------------EEcCCCCEEEE
Confidence            777765 458999999999999999999999999999   9999999                      88889999999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN  226 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~  226 (245)
                      |||+++.... ........||..|+|||.+.+..++.++|||||||++|+|++|+.||.+.+..+....+..
T Consensus       170 Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  240 (371)
T 2xrw_A          170 DFGLARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE  240 (371)
T ss_dssp             CCCC-----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC
T ss_pred             Eeeccccccc-ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            9999875322 2223456789999999999988899999999999999999999999999888777776654


No 141
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.6e-37  Score=261.29  Aligned_cols=215  Identities=26%  Similarity=0.447  Sum_probs=169.4

Q ss_pred             CEeEEEe-----cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCc
Q psy3347           1 VILSQYR-----NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~   74 (245)
                      ||+|++.     .+++.||+|++....  .....+.+.+|   +..++.+ +||||+++++++...+..++||||+++++
T Consensus        61 V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E---~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~  135 (344)
T 1rjb_A           61 VMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSE---LKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD  135 (344)
T ss_dssp             EEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHH---HHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             eEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHH---HHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCc
Confidence            7889873     367789999997542  22233444444   6667777 89999999999999999999999999999


Q ss_pred             hhhhhhhc------------------------CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhh
Q psy3347          75 LMMHIHAD------------------------VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQE  130 (245)
Q Consensus        75 L~~~~~~~------------------------~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~  130 (245)
                      |.+++...                        .+++..+..++.|++.||+|||++|++|+   |++|+||         
T Consensus       136 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~---Dikp~NI---------  203 (344)
T 1rjb_A          136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR---DLAARNV---------  203 (344)
T ss_dssp             HHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET---TCSGGGE---------
T ss_pred             HHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccC---CCChhhE---------
Confidence            99988542                        27888999999999999999999999999   9999998         


Q ss_pred             ccccCcccchhccccCCCCceEEeecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-
Q psy3347         131 NYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-  207 (245)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-  207 (245)
                                   +++.++.++|+|||++........  ......+++.|+|||.+.+..++.++||||||+++|+|++ 
T Consensus       204 -------------ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~  270 (344)
T 1rjb_A          204 -------------LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL  270 (344)
T ss_dssp             -------------EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred             -------------EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcC
Confidence                         888889999999999875322221  1234456778999999988889999999999999999998 


Q ss_pred             CCCCCCCCCHHHHHHHHhcC--cccCCCCCChhHHhhhcC
Q psy3347         208 GESPFPGDDEEEVFDSIVND--EVRYPRFLSLEAIAIMRR  245 (245)
Q Consensus       208 g~~pf~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~  245 (245)
                      |..||.+....+....+...  ....|..+++++.+||++
T Consensus       271 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  310 (344)
T 1rjb_A          271 GVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQS  310 (344)
T ss_dssp             SCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             CCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence            99999887655444444433  234577889999998863


No 142
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=9.3e-37  Score=254.78  Aligned_cols=212  Identities=24%  Similarity=0.405  Sum_probs=165.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEee------CCeEEEEEeeccCC
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQT------EAHVCFVMEYAAGG   73 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~------~~~~~lv~e~~~~~   73 (245)
                      ||+|++..+|+.||+|++....    ...+.+.+|   +..++.+ +||||+++++++..      .+..++||||++++
T Consensus        40 Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e---~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~  112 (326)
T 2x7f_A           40 VYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQE---INMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAG  112 (326)
T ss_dssp             EEEEEETTTCCEEEEEEEECCS----STTHHHHHH---HHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTE
T ss_pred             EEEEEECCCCCeEEEEEEecCc----ccHHHHHHH---HHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCC
Confidence            7999999999999999997542    122344444   5556666 79999999999977      46899999999999


Q ss_pred             chhhhhhh---cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCc
Q psy3347          74 DLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY  150 (245)
Q Consensus        74 ~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (245)
                      +|.+++..   ..+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.
T Consensus       113 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~---dlkp~NI----------------------l~~~~~~  167 (326)
T 2x7f_A          113 SVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHR---DIKGQNV----------------------LLTENAE  167 (326)
T ss_dssp             EHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCSGGGE----------------------EECTTCC
T ss_pred             cHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---CCcHHHE----------------------EEcCCCC
Confidence            99999854   468999999999999999999999999999   9999998                      8888999


Q ss_pred             eEEeecCCccCCCCCCCCCCcccCCCCcccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLT-----ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       151 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      ++|+|||++..............|+..|+|||.+.     +..++.++|||||||++|+|++|..||.+.........+.
T Consensus       168 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  247 (326)
T 2x7f_A          168 VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP  247 (326)
T ss_dssp             EEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             EEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhh
Confidence            99999999875433322334557899999999996     4568899999999999999999999998887776666655


Q ss_pred             cCccc--CCCCCChhHHhhhc
Q psy3347         226 NDEVR--YPRFLSLEAIAIMR  244 (245)
Q Consensus       226 ~~~~~--~p~~~~~~~~~li~  244 (245)
                      ....+  .+..+++++++||+
T Consensus       248 ~~~~~~~~~~~~~~~l~~li~  268 (326)
T 2x7f_A          248 RNPAPRLKSKKWSKKFQSFIE  268 (326)
T ss_dssp             HSCCCCCSCSCSCHHHHHHHH
T ss_pred             cCccccCCccccCHHHHHHHH
Confidence            44332  24678888888876


No 143
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=4.2e-37  Score=268.60  Aligned_cols=186  Identities=21%  Similarity=0.321  Sum_probs=145.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC-----CeEEEEEeeccCCch
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE-----AHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~-----~~~~lv~e~~~~~~L   75 (245)
                      ||+|+++.+|+.||||++.... ......+.+   .+++++++.++||||+++++++...     +..|+|||+++ ++|
T Consensus        69 V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L  143 (458)
T 3rp9_A           69 VCEAYDKLEKRVVAIKKILRVF-EDLIDCKRI---LREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDF  143 (458)
T ss_dssp             EEEEEECC--CEEEEEEECSTT-SSHHHHHHH---HHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS-EEH
T ss_pred             EEEEEECCCCcEEEEEEechhh-cCHHHHHHH---HHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccc-cch
Confidence            7999999999999999997542 122233334   4457778888999999999999443     57999999985 588


Q ss_pred             hhhhhh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          76 MMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        76 ~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      ..+++. ..+++..++.++.|++.||+|||++||+||   |+||+||                      +++.++.+||+
T Consensus       144 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHr---DlKp~NI----------------------Ll~~~~~~kl~  198 (458)
T 3rp9_A          144 KKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHR---DLKPANC----------------------LVNQDCSVKVC  198 (458)
T ss_dssp             HHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCC---CCCGGGE----------------------EECTTCCEEEC
T ss_pred             hhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCC---CCChhhE----------------------EECCCCCEeec
Confidence            888754 469999999999999999999999999999   9999999                      88899999999


Q ss_pred             ecCCccCCCCCC---------------------------CCCCcccCCCCcccccccc-CCCCCcchhHHHHHHHHHHHH
Q psy3347         155 DFGLCKEGMGFG---------------------------DRTGTFCGTPEFLAPEVLT-ETSYTRAVDWWGLGVLIFEML  206 (245)
Q Consensus       155 Dfg~~~~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~el~  206 (245)
                      |||+++......                           ......+||+.|+|||++. +..++.++|||||||++|||+
T Consensus       199 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ell  278 (458)
T 3rp9_A          199 DFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL  278 (458)
T ss_dssp             CCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred             ccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHH
Confidence            999997542211                           1123457899999999874 567999999999999999999


Q ss_pred             h-----------CCCCCCCCC
Q psy3347         207 V-----------GESPFPGDD  216 (245)
Q Consensus       207 ~-----------g~~pf~~~~  216 (245)
                      +           |+++|++.+
T Consensus       279 tg~~~~~~~~~~~~p~f~g~~  299 (458)
T 3rp9_A          279 NMIKENVAYHADRGPLFPGSS  299 (458)
T ss_dssp             TTSTTTCSSGGGCCCSCC---
T ss_pred             HhccccccccccccccCCCCc
Confidence            8           788887654


No 144
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=2e-37  Score=255.51  Aligned_cols=214  Identities=24%  Similarity=0.370  Sum_probs=165.2

Q ss_pred             CEeEE----EecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC--CeEEEEEeeccCCc
Q psy3347           1 VILSQ----YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE--AHVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~--~~~~lv~e~~~~~~   74 (245)
                      ||+|+    +..+|+.||+|++...   .....+.+.   +++++++.++||||+++++++...  ...++||||+++++
T Consensus        26 V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~---~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~   99 (295)
T 3ugc_A           26 VEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFE---REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS   99 (295)
T ss_dssp             EEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHH---HHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCB
T ss_pred             EEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHH---HHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCC
Confidence            68888    6678999999999754   233334444   447778899999999999998653  56899999999999


Q ss_pred             hhhhhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceE
Q psy3347          75 LMMHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVK  152 (245)
Q Consensus        75 L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  152 (245)
                      |.+++..  ..+++..+..++.|++.||+|||++|++|+   |+||+||                      +++.++.+|
T Consensus       100 L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~---Dikp~Ni----------------------l~~~~~~~k  154 (295)
T 3ugc_A          100 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI----------------------LVENENRVK  154 (295)
T ss_dssp             HHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE----------------------EEEETTEEE
T ss_pred             HHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccC---CCCHhhE----------------------EEcCCCeEE
Confidence            9999854  348999999999999999999999999999   9999888                      788889999


Q ss_pred             EeecCCccCCCCCCC---CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-----------
Q psy3347         153 IADFGLCKEGMGFGD---RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE-----------  218 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~-----------  218 (245)
                      |+|||++........   ......++..|+|||.+.+..++.++||||||+++|+|++|..||......           
T Consensus       155 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~  234 (295)
T 3ugc_A          155 IGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG  234 (295)
T ss_dssp             ECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCT
T ss_pred             EccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCcccc
Confidence            999999875432221   122334667799999999889999999999999999999999988543211           


Q ss_pred             -----HHHHHHhcC-cccCCCCCChhHHhhhcC
Q psy3347         219 -----EVFDSIVND-EVRYPRFLSLEAIAIMRR  245 (245)
Q Consensus       219 -----~~~~~~~~~-~~~~p~~~~~~~~~li~~  245 (245)
                           .....+... ..+.|..+++++.+||++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  267 (295)
T 3ugc_A          235 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE  267 (295)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             chhHHHHHHHHhccCcCCCCcCcCHHHHHHHHH
Confidence                 222222222 335678899999998863


No 145
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=3e-37  Score=259.95  Aligned_cols=213  Identities=22%  Similarity=0.433  Sum_probs=175.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhh--------------HHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEE
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDE--------------VESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFV   66 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~--------------~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv   66 (245)
                      ||+|++  +|+.||+|++..........              .+.+.   ++++.++.++||||+++++++...+..++|
T Consensus        47 V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  121 (348)
T 2pml_X           47 IILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFK---NELQIITDIKNEYCLTCEGIITNYDEVYII  121 (348)
T ss_dssp             EEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHH---HHHHHHTTCCCTTBCCCSEEEESSSEEEEE
T ss_pred             EEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHH---HHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence            799988  89999999998643221111              13444   447778899999999999999999999999


Q ss_pred             EeeccCCchhhh------hh---hcCCChHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCHHHHHHHHHHhhhccccCc
Q psy3347          67 MEYAAGGDLMMH------IH---ADVFSEPRAVFYAACVVLGLQYLHE-SRIIYRPQSNITKEEIKRIEAKVQENYKVNS  136 (245)
Q Consensus        67 ~e~~~~~~L~~~------~~---~~~l~~~~~~~i~~~i~~~l~~lH~-~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~  136 (245)
                      |||+++++|.++      +.   ...+++..+..++.|++.||.|||+ +|++|+   |++|+||               
T Consensus       122 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~---dl~p~Ni---------------  183 (348)
T 2pml_X          122 YEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHR---DVKPSNI---------------  183 (348)
T ss_dssp             EECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECC---CCCGGGE---------------
T ss_pred             EeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeec---CCChHhE---------------
Confidence            999999999988      54   3568999999999999999999999 999999   9999998               


Q ss_pred             ccchhccccCCCCceEEeecCCccCCCCCCCCCCcccCCCCccccccccCC-CCCc-chhHHHHHHHHHHHHhCCCCCCC
Q psy3347         137 SQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET-SYTR-AVDWWGLGVLIFEMLVGESPFPG  214 (245)
Q Consensus       137 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~~DvwslG~~l~el~~g~~pf~~  214 (245)
                             +++.++.++|+|||++......  ......|+..|+|||.+.+. .++. ++||||||+++|+|++|+.||.+
T Consensus       184 -------l~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  254 (348)
T 2pml_X          184 -------LMDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL  254 (348)
T ss_dssp             -------EECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -------EEcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence                   8888999999999998753222  23455788999999999876 5666 99999999999999999999987


Q ss_pred             CCH-HHHHHHHhcCcccCC-------------------CCCChhHHhhhcC
Q psy3347         215 DDE-EEVFDSIVNDEVRYP-------------------RFLSLEAIAIMRR  245 (245)
Q Consensus       215 ~~~-~~~~~~~~~~~~~~p-------------------~~~~~~~~~li~~  245 (245)
                      ... .+....+..+...+|                   ..+++++.+||++
T Consensus       255 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  305 (348)
T 2pml_X          255 KISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKL  305 (348)
T ss_dssp             SSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHH
T ss_pred             CCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHH
Confidence            766 777777777766666                   6688899888863


No 146
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.2e-37  Score=251.68  Aligned_cols=213  Identities=24%  Similarity=0.397  Sum_probs=174.1

Q ss_pred             CEeEEEe--cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYR--NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|.++  .+++.||+|+++...  .....+.+.+   +++.++.++||||+++++++ ..+..++||||+++++|.++
T Consensus        26 Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~---E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~   99 (287)
T 1u59_A           26 VRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMR---EAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKF   99 (287)
T ss_dssp             EEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHH---HHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHH
T ss_pred             EEEeEeccCCCcceEEEEecCCcc--chhHHHHHHH---HHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHH
Confidence            7888754  468899999998642  2233344444   46777888999999999999 55679999999999999998


Q ss_pred             hh--hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeec
Q psy3347          79 IH--ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADF  156 (245)
Q Consensus        79 ~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df  156 (245)
                      +.  ...+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.++|+||
T Consensus       100 l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---dlkp~Ni----------------------li~~~~~~kl~Df  154 (287)
T 1u59_A          100 LVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR---DLAARNV----------------------LLVNRHYAKISDF  154 (287)
T ss_dssp             HTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EEEETTEEEECCC
T ss_pred             HHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeC---CCchheE----------------------EEcCCCCEEECcc
Confidence            84  3468999999999999999999999999999   9999888                      7788899999999


Q ss_pred             CCccCCCCCCC---CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-ccC
Q psy3347         157 GLCKEGMGFGD---RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VRY  231 (245)
Q Consensus       157 g~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~  231 (245)
                      |++........   ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||.+....+....+..+. ...
T Consensus       155 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~  234 (287)
T 1u59_A          155 GLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC  234 (287)
T ss_dssp             TTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCC
T ss_pred             cceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCC
Confidence            99875322221   1223345788999999988889999999999999999998 999999888888777776654 456


Q ss_pred             CCCCChhHHhhhc
Q psy3347         232 PRFLSLEAIAIMR  244 (245)
Q Consensus       232 p~~~~~~~~~li~  244 (245)
                      |..+++++.++|+
T Consensus       235 ~~~~~~~l~~li~  247 (287)
T 1u59_A          235 PPECPPELYALMS  247 (287)
T ss_dssp             CTTCCHHHHHHHH
T ss_pred             CCCcCHHHHHHHH
Confidence            7889999999886


No 147
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=8.6e-37  Score=264.86  Aligned_cols=178  Identities=23%  Similarity=0.363  Sum_probs=145.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC-----CeEEEEEeeccCCch
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE-----AHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~-----~~~~lv~e~~~~~~L   75 (245)
                      ||+|+++.+|+.||||++.... ......+.+   .+++++++.++||||+++++++...     +..|+||||+++ +|
T Consensus        42 V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~---~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L  116 (432)
T 3n9x_A           42 VYLAYDKNTEKNVAIKKVNRMF-EDLIDCKRI---LREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DL  116 (432)
T ss_dssp             EEEEEETTTTEEEEEEEECSTT-TSHHHHHHH---HHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCSE-EH
T ss_pred             EEEEEECCCCcEEEEEEeCchh-cChHHHHHH---HHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCCc-CH
Confidence            7999999999999999997542 122223333   4557788889999999999999766     579999999864 99


Q ss_pred             hhhhhh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          76 MMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        76 ~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      ..+++. ..+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+
T Consensus       117 ~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHr---Dlkp~NI----------------------Ll~~~~~~kL~  171 (432)
T 3n9x_A          117 KKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHR---DLKPANC----------------------LLNQDCSVKVC  171 (432)
T ss_dssp             HHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EECTTCCEEEC
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCHHHe----------------------EECCCCCEEEc
Confidence            888865 468999999999999999999999999999   9999999                      88899999999


Q ss_pred             ecCCccCCCCCC----------------------CCCCcccCCCCccccccc-cCCCCCcchhHHHHHHHHHHHHhC
Q psy3347         155 DFGLCKEGMGFG----------------------DRTGTFCGTPEFLAPEVL-TETSYTRAVDWWGLGVLIFEMLVG  208 (245)
Q Consensus       155 Dfg~~~~~~~~~----------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~~l~el~~g  208 (245)
                      |||+++......                      ......+||..|+|||.+ .+..++.++|||||||++|||++|
T Consensus       172 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g  248 (432)
T 3n9x_A          172 DFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM  248 (432)
T ss_dssp             CCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhc
Confidence            999997532221                      113566889999999986 456689999999999999999973


No 148
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=5.9e-37  Score=252.91  Aligned_cols=195  Identities=28%  Similarity=0.415  Sum_probs=158.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++...... ....+.+   .++++.++.++||||+++++++..++..++||||+. ++|.+++.
T Consensus        19 V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~---~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~   93 (299)
T 2r3i_A           19 VYKARNKLTGEVVALKKIRLDTET-EGVPSTA---IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMD   93 (299)
T ss_dssp             EEEEEETTTCCEEEEEEC---------CCHHH---HHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHH
T ss_pred             EEEEEEcCCCceEEEEEeecCccc-hhhHHHH---HHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CCHHHHHH
Confidence            799999999999999999754311 1112333   345778889999999999999999999999999997 58988885


Q ss_pred             h---cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          81 A---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        81 ~---~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      .   ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||
T Consensus        94 ~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~---dlkp~Ni----------------------li~~~~~~kl~dfg  148 (299)
T 2r3i_A           94 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR---DLKPQNL----------------------LINTEGAIKLADFG  148 (299)
T ss_dssp             HTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EECTTSCEEECSTT
T ss_pred             hhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCC---CCCHHHe----------------------EEcCCCCEEECcch
Confidence            4   358899999999999999999999999999   9999998                      88889999999999


Q ss_pred             CccCCCCCCCCCCcccCCCCccccccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         158 LCKEGMGFGDRTGTFCGTPEFLAPEVLTETS-YTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      ++..............++..|+|||.+.+.. ++.++||||||+++|+|++|+.||.+.+..+....+.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~  217 (299)
T 2r3i_A          149 LARAFGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF  217 (299)
T ss_dssp             HHHHHCCCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             hhhhccCCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence            8864332222334456789999999998755 7899999999999999999999999888776666554


No 149
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.5e-37  Score=256.60  Aligned_cols=214  Identities=21%  Similarity=0.310  Sum_probs=169.9

Q ss_pred             CEeEEEecCC----cEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTG----EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|.++.++    ..||+|+++...  .......+.   ++++.++.++||||+++++++...+..++||||+++++|.
T Consensus        60 Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~---~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  134 (333)
T 1mqb_A           60 VYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFL---GEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALD  134 (333)
T ss_dssp             EEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHH---HHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHH
T ss_pred             EEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHH---HHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHH
Confidence            7899887653    469999997542  222333344   4477788899999999999999999999999999999999


Q ss_pred             hhhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          77 MHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        77 ~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      +++..  ..+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.+||+
T Consensus       135 ~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~---Dikp~NI----------------------l~~~~~~~kl~  189 (333)
T 1mqb_A          135 KFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHR---DLAARNI----------------------LVNSNLVCKVS  189 (333)
T ss_dssp             HHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EECTTCCEEEC
T ss_pred             HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC---CCChheE----------------------EECCCCcEEEC
Confidence            99854  468999999999999999999999999999   9999998                      88889999999


Q ss_pred             ecCCccCCCCCCCC---CCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-cc
Q psy3347         155 DFGLCKEGMGFGDR---TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND-EV  229 (245)
Q Consensus       155 Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~-~~  229 (245)
                      |||++.........   .....++..|+|||.+.+..++.++||||||+++|+|++ |+.||.+.+..+....+..+ ..
T Consensus       190 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~  269 (333)
T 1mqb_A          190 DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL  269 (333)
T ss_dssp             CCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC
T ss_pred             CCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcC
Confidence            99998754322211   122234678999999988889999999999999999999 99999988888888877665 34


Q ss_pred             cCCCCCChhHHhhhc
Q psy3347         230 RYPRFLSLEAIAIMR  244 (245)
Q Consensus       230 ~~p~~~~~~~~~li~  244 (245)
                      +.|..+++++.++|+
T Consensus       270 ~~~~~~~~~l~~li~  284 (333)
T 1mqb_A          270 PTPMDCPSAIYQLMM  284 (333)
T ss_dssp             CCCTTCBHHHHHHHH
T ss_pred             CCcccCCHHHHHHHH
Confidence            557788999988875


No 150
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=5.6e-37  Score=253.72  Aligned_cols=216  Identities=24%  Similarity=0.369  Sum_probs=174.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccc-hhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEe--eCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIA-RDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ--TEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~--~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|++..+|+.||+|++....... ....+.+   .++++.++.++||||+++++++.  ..+..++||||++++ |.+
T Consensus        21 V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~---~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~   96 (305)
T 2wtk_C           21 VKEVLDSETLCRRAVKILKKKKLRRIPNGEANV---KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQE   96 (305)
T ss_dssp             EEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHH---HHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHH
T ss_pred             EEEEEECCCCcEEEEEEeccccccccchhHHHH---HHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHH
Confidence            7999999999999999998643221 1222333   44577888999999999999984  456899999999876 555


Q ss_pred             hhh---hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          78 HIH---ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        78 ~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      ++.   ...+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.++|+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~---dlkp~NI----------------------l~~~~~~~kl~  151 (305)
T 2wtk_C           97 MLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHK---DIKPGNL----------------------LLTTGGTLKIS  151 (305)
T ss_dssp             HHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECTTCCEEEC
T ss_pred             HHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeec---CCCcccE----------------------EEcCCCcEEee
Confidence            553   3568999999999999999999999999999   9999998                      88889999999


Q ss_pred             ecCCccCCCCC--CCCCCcccCCCCccccccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCccc
Q psy3347         155 DFGLCKEGMGF--GDRTGTFCGTPEFLAPEVLTETS--YTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR  230 (245)
Q Consensus       155 Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~  230 (245)
                      |||++......  ........|+..|+|||.+.+..  ++.++||||||+++|+|++|+.||.+.+..+....+......
T Consensus       152 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~  231 (305)
T 2wtk_C          152 ALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYA  231 (305)
T ss_dssp             CCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC
T ss_pred             ccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCC
Confidence            99998753221  11223456889999999997644  367999999999999999999999998888888888888888


Q ss_pred             CCCCCChhHHhhhcC
Q psy3347         231 YPRFLSLEAIAIMRR  245 (245)
Q Consensus       231 ~p~~~~~~~~~li~~  245 (245)
                      +|..+++++.+||++
T Consensus       232 ~~~~~~~~l~~li~~  246 (305)
T 2wtk_C          232 IPGDCGPPLSDLLKG  246 (305)
T ss_dssp             CCSSSCHHHHHHHHH
T ss_pred             CCCccCHHHHHHHHH
Confidence            889999999998863


No 151
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=5.8e-38  Score=266.99  Aligned_cols=215  Identities=17%  Similarity=0.147  Sum_probs=157.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeee-------EEEeeC-------------
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLF-------ACFQTE-------------   60 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~-------~~~~~~-------------   60 (245)
                      ||+|+++.+|+.||+|++...........+.+.+|.+++..++. +||||++++       +++...             
T Consensus        78 V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~  156 (371)
T 3q60_A           78 VFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQD  156 (371)
T ss_dssp             EEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC--
T ss_pred             EEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcc
Confidence            79999999999999999998654444556667777777888888 899977755       555443             


Q ss_pred             ----CeEEEEEeeccCCchhhhhhh--cCCChHHH------HHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHh
Q psy3347          61 ----AHVCFVMEYAAGGDLMMHIHA--DVFSEPRA------VFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKV  128 (245)
Q Consensus        61 ----~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~------~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~  128 (245)
                          ...|+||||++ ++|.+++..  ..++...+      ..++.|++.||+|||++||+||   |+||+||       
T Consensus       157 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHr---Dikp~NI-------  225 (371)
T 3q60_A          157 DYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHG---HFTPDNL-------  225 (371)
T ss_dssp             -CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEET---TCSGGGE-------
T ss_pred             cceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccC---cCCHHHE-------
Confidence                34899999998 799999863  34555555      5777999999999999999999   9999999       


Q ss_pred             hhccccCcccchhccccCCCCceEEeecCCccCCCCCCCCCCcccCCCCccccccccC--CCCCcchhHHHHHHHHHHHH
Q psy3347         129 QENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE--TSYTRAVDWWGLGVLIFEML  206 (245)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~  206 (245)
                                     +++.++.+||+|||+++...   .......++..|+|||.+.+  ..++.++|||||||++|+|+
T Consensus       226 ---------------ll~~~~~~kL~DFG~a~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ell  287 (371)
T 3q60_A          226 ---------------FIMPDGRLMLGDVSALWKVG---TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVW  287 (371)
T ss_dssp             ---------------EECTTSCEEECCGGGEEETT---CEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHH
T ss_pred             ---------------EECCCCCEEEEecceeeecC---CCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHH
Confidence                           88899999999999987532   11224456689999999987  67999999999999999999


Q ss_pred             hCCCCCCCCCHHHH--HHH---H--hcCcccCC--CCCChhHHhhhcC
Q psy3347         207 VGESPFPGDDEEEV--FDS---I--VNDEVRYP--RFLSLEAIAIMRR  245 (245)
Q Consensus       207 ~g~~pf~~~~~~~~--~~~---~--~~~~~~~p--~~~~~~~~~li~~  245 (245)
                      +|+.||.+......  ...   .  ......+|  ..+++++++||++
T Consensus       288 tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  335 (371)
T 3q60_A          288 CLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGR  335 (371)
T ss_dssp             HSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHH
T ss_pred             hCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHH
Confidence            99999976633211  000   0  11122223  5788999988863


No 152
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=7.9e-37  Score=251.88  Aligned_cols=210  Identities=18%  Similarity=0.229  Sum_probs=166.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|++..+|+.||+|++....     ..+.+.+|   +..++.+ +|+|++++++++...+..++||||+ +++|.+++
T Consensus        26 V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e---~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l   96 (298)
T 1csn_A           26 IFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDE---YRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLL   96 (298)
T ss_dssp             EEEEEETTTTEEEEEEEEECCT-----TSCCHHHH---HHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHH
T ss_pred             EEEEEECCCCcEEEEEEeccCC-----ccHHHHHH---HHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHH
Confidence            7999999999999999987542     11234444   4445555 6999999999999999999999999 88999998


Q ss_pred             hh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCc-----eE
Q psy3347          80 HA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY-----VK  152 (245)
Q Consensus        80 ~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~k  152 (245)
                      ..  ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.     ++
T Consensus        97 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~---Dlkp~NI----------------------l~~~~~~~~~~~~k  151 (298)
T 1csn_A           97 DLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYR---DIKPDNF----------------------LIGRPNSKNANMIY  151 (298)
T ss_dssp             HHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECC---CCCGGGE----------------------EECCSSSTTTTCEE
T ss_pred             HHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecC---CCCHHHE----------------------EeccCCCCCCCeEE
Confidence            64  468999999999999999999999999999   8888888                      6665554     99


Q ss_pred             EeecCCccCCCCCCC-------CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC---CHHHHHH
Q psy3347         153 IADFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD---DEEEVFD  222 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~---~~~~~~~  222 (245)
                      |+|||++........       ......||..|+|||.+.+..++.++||||||+++|+|++|+.||.+.   ...+...
T Consensus       152 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~  231 (298)
T 1csn_A          152 VVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYE  231 (298)
T ss_dssp             ECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHH
T ss_pred             EEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHH
Confidence            999999875432221       134557899999999999888999999999999999999999999764   3444444


Q ss_pred             HHhcCccc-----CCCCCChhHHhhhc
Q psy3347         223 SIVNDEVR-----YPRFLSLEAIAIMR  244 (245)
Q Consensus       223 ~~~~~~~~-----~p~~~~~~~~~li~  244 (245)
                      .+......     .+..+++++.+||+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~l~~li~  258 (298)
T 1csn_A          232 RIGEKKQSTPLRELCAGFPEEFYKYMH  258 (298)
T ss_dssp             HHHHHHHHSCHHHHTTTSCHHHHHHHH
T ss_pred             HHHhhccCccHHHHHhhCcHHHHHHHH
Confidence            44333222     23578888888875


No 153
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=1.3e-37  Score=257.11  Aligned_cols=213  Identities=25%  Similarity=0.481  Sum_probs=169.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|++....   ....+.+.+   +++.++.++||||+++++++..++..++||||+++++|.+++.
T Consensus        35 V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~---e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~  108 (302)
T 2j7t_A           35 VYKAKNKETGALAAAKVIETKS---EEELEDYIV---EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIML  108 (302)
T ss_dssp             EEEEEETTTCCEEEEEEEC-------CCHHHHHH---HHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHH
T ss_pred             EEEEEEcCCCcEEEEEEecCCC---HHHHHHHHH---HHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHH
Confidence            7999999999999999997542   222344444   4667788899999999999999999999999999999998875


Q ss_pred             --hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 --ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 --~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                        ...+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.++|+|||+
T Consensus       109 ~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~---dlkp~Ni----------------------l~~~~~~~kl~Dfg~  163 (302)
T 2j7t_A          109 ELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHR---DLKAGNV----------------------LMTLEGDIRLADFGV  163 (302)
T ss_dssp             HHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCSGGGE----------------------EECTTSCEEECCCHH
T ss_pred             hhccCCCHHHHHHHHHHHHHHHHHHhcCCcccC---CCCHHHE----------------------EECCCCCEEEEECCC
Confidence              3569999999999999999999999999999   9999998                      888889999999998


Q ss_pred             ccCCCCCCCCCCcccCCCCcccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCccc---
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLT-----ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR---  230 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~---  230 (245)
                      +..............|+..|+|||.+.     +..++.++||||||+++|+|++|+.||...+..+....+.....+   
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  243 (302)
T 2j7t_A          164 SAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLL  243 (302)
T ss_dssp             HHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS
T ss_pred             CccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccC
Confidence            753211111223456888999999983     567889999999999999999999999988877777666554432   


Q ss_pred             CCCCCChhHHhhhc
Q psy3347         231 YPRFLSLEAIAIMR  244 (245)
Q Consensus       231 ~p~~~~~~~~~li~  244 (245)
                      .|..+++++.++|+
T Consensus       244 ~~~~~~~~l~~li~  257 (302)
T 2j7t_A          244 TPSKWSVEFRDFLK  257 (302)
T ss_dssp             SGGGSCHHHHHHHH
T ss_pred             CccccCHHHHHHHH
Confidence            35677888888875


No 154
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=1.2e-37  Score=260.56  Aligned_cols=213  Identities=20%  Similarity=0.354  Sum_probs=169.9

Q ss_pred             CEeEEEecCCcE----EEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGEY----FAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~~----vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|++..+|+.    ||+|.+....  .....+.   ..+++..++.++||||+++++++. ++..++||||+.+++|.
T Consensus        29 Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~---~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~  102 (325)
T 3kex_A           29 VHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQA---VTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLL  102 (325)
T ss_dssp             EEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCS---CCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSH
T ss_pred             EEEEEEcCCCceEEEEEEEEeccccc--cHHHHHH---HHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHH
Confidence            799999988886    6667665332  1111222   234467788899999999999986 55689999999999999


Q ss_pred             hhhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          77 MHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        77 ~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      +++..  ..+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+
T Consensus       103 ~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~---Dikp~Ni----------------------l~~~~~~~kl~  157 (325)
T 3kex_A          103 DHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHR---NLAARNV----------------------LLKSPSQVQVA  157 (325)
T ss_dssp             HHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCS---CCSSTTE----------------------EESSSSCEEEC
T ss_pred             HHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCC---ccchheE----------------------EECCCCeEEEC
Confidence            98854  478999999999999999999999999999   9999998                      88889999999


Q ss_pred             ecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-cc
Q psy3347         155 DFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VR  230 (245)
Q Consensus       155 Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~  230 (245)
                      |||+++.......  ......++..|+|||.+.+..++.++||||||+++|+|++ |..||.+....+....+..+. ..
T Consensus       158 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~  237 (325)
T 3kex_A          158 DFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLA  237 (325)
T ss_dssp             SCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCC
T ss_pred             CCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCC
Confidence            9999975432221  2334567778999999998889999999999999999999 999999888777777776653 35


Q ss_pred             CCCCCChhHHhhhc
Q psy3347         231 YPRFLSLEAIAIMR  244 (245)
Q Consensus       231 ~p~~~~~~~~~li~  244 (245)
                      .|..+++++.++|+
T Consensus       238 ~~~~~~~~~~~li~  251 (325)
T 3kex_A          238 QPQICTIDVYMVMV  251 (325)
T ss_dssp             CCTTBCTTTTHHHH
T ss_pred             CCCcCcHHHHHHHH
Confidence            57778888888775


No 155
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=2.9e-37  Score=269.39  Aligned_cols=211  Identities=26%  Similarity=0.417  Sum_probs=174.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.+. +++.||||+++...    ...+.+.+|   +.+++.++||||+++++++. .+..++||||+.+|+|.++++
T Consensus       204 V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~E---~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~  274 (454)
T 1qcf_A          204 VWMATYN-KHTKVAVKTMKPGS----MSVEAFLAE---ANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLK  274 (454)
T ss_dssp             EEEEEET-TTEEEEEEEECTTS----BCHHHHHHH---HHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHH
T ss_pred             EEEEEEC-CccEEEEEEecCCC----ccHHHHHHH---HHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHH
Confidence            7999886 47789999998643    123444444   77788999999999999986 567899999999999999986


Q ss_pred             h---cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          81 A---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        81 ~---~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      .   ..+++..+..++.|++.||+|||++|++||   |++|+||                      +++.++.+||+|||
T Consensus       275 ~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHr---Dlkp~Ni----------------------ll~~~~~~kl~DFG  329 (454)
T 1qcf_A          275 SDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR---DLRAANI----------------------LVSASLVCKIADFG  329 (454)
T ss_dssp             SHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCS---SCSGGGE----------------------EECTTCCEEECSTT
T ss_pred             hccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCC---CCCHHHE----------------------EECCCCcEEEeeCC
Confidence            3   368899999999999999999999999999   9999998                      88889999999999


Q ss_pred             CccCCCCCCC-CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-ccCCCC
Q psy3347         158 LCKEGMGFGD-RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VRYPRF  234 (245)
Q Consensus       158 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~p~~  234 (245)
                      +++....... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.+.+..+....+..+. .+.|..
T Consensus       330 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~  409 (454)
T 1qcf_A          330 LARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPEN  409 (454)
T ss_dssp             GGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTT
T ss_pred             CceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence            9975322111 1122345678999999988889999999999999999999 999999998888888876653 356788


Q ss_pred             CChhHHhhhcC
Q psy3347         235 LSLEAIAIMRR  245 (245)
Q Consensus       235 ~~~~~~~li~~  245 (245)
                      +++++.+||++
T Consensus       410 ~~~~l~~li~~  420 (454)
T 1qcf_A          410 CPEELYNIMMR  420 (454)
T ss_dssp             SCHHHHHHHHH
T ss_pred             CCHHHHHHHHH
Confidence            99999999863


No 156
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=8.3e-37  Score=248.20  Aligned_cols=208  Identities=19%  Similarity=0.297  Sum_probs=171.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC--CeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE--AHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~--~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|++.  |+.||+|+++..... ....+.+.   +++..++.++||||+++++++...  +..+++|||+++++|.++
T Consensus        26 V~~~~~~--~~~~avK~~~~~~~~-~~~~~~~~---~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~   99 (271)
T 3kmu_A           26 LWKGRWQ--GNDIVVKVLKVRDWS-TRKSRDFN---EECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNV   99 (271)
T ss_dssp             EEEEEET--TEEEEEEEECCTTCC-HHHHHHHH---HHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHH
T ss_pred             EEEEEEC--CeeEEEEEecccccC-HHHHHHHH---HHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHH
Confidence            7899885  889999999865322 22333444   446778899999999999999876  789999999999999999


Q ss_pred             hhhc---CCChHHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEE
Q psy3347          79 IHAD---VFSEPRAVFYAACVVLGLQYLHESR--IIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKI  153 (245)
Q Consensus        79 ~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl  153 (245)
                      +...   .+++..+..++.|++.||+|||++|  ++|+   |++|+||                      +++.++.++|
T Consensus       100 l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~---dikp~Ni----------------------l~~~~~~~~l  154 (271)
T 3kmu_A          100 LHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRH---ALNSRSV----------------------MIDEDMTARI  154 (271)
T ss_dssp             HHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTC---CCSGGGE----------------------EECTTSCEEE
T ss_pred             HhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecC---CCccceE----------------------EEcCCcceeE
Confidence            9653   4899999999999999999999999  9999   9999998                      8888999999


Q ss_pred             eecCCccCCCCCCCCCCcccCCCCccccccccCCCCCc---chhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCc--
Q psy3347         154 ADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTR---AVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDE--  228 (245)
Q Consensus       154 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~--  228 (245)
                      +|||++....     .....+|+.|+|||.+.+..++.   ++||||||+++|+|++|+.||.+.+..+....+....  
T Consensus       155 ~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~  229 (271)
T 3kmu_A          155 SMADVKFSFQ-----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLR  229 (271)
T ss_dssp             EGGGSCCTTS-----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCC
T ss_pred             Eeccceeeec-----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCC
Confidence            9998765421     22346788999999998765543   7999999999999999999999888877777765443  


Q ss_pred             ccCCCCCChhHHhhhc
Q psy3347         229 VRYPRFLSLEAIAIMR  244 (245)
Q Consensus       229 ~~~p~~~~~~~~~li~  244 (245)
                      ...|..+++++.++|+
T Consensus       230 ~~~~~~~~~~~~~li~  245 (271)
T 3kmu_A          230 PTIPPGISPHVSKLMK  245 (271)
T ss_dssp             CCCCTTCCHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHH
Confidence            3467889999999886


No 157
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=6.1e-37  Score=260.06  Aligned_cols=194  Identities=22%  Similarity=0.385  Sum_probs=161.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC-----CeEEEEEeeccCCch
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE-----AHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~-----~~~~lv~e~~~~~~L   75 (245)
                      ||+|++..+|+.||+|++....  .....+.+.   +++++++.++||||+++++++...     ...++|||++++ +|
T Consensus        43 V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~---~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L  116 (364)
T 3qyz_A           43 VCSAYDNLNKVRVAIKKISPFE--HQTYCQRTL---REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DL  116 (364)
T ss_dssp             EEEEEETTTTEEEEEEEECCTT--CHHHHHHHH---HHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EH
T ss_pred             EEEEEECCCCeEEEEEEecccc--CcHHHHHHH---HHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccCc-CH
Confidence            7999999999999999997532  222233343   457778889999999999999665     378999999975 89


Q ss_pred             hhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          76 MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        76 ~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      .++++...+++..+..++.|++.||+|||++||+|+   |++|+||                      +++.++.+||+|
T Consensus       117 ~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~---Dikp~NI----------------------l~~~~~~~kl~D  171 (364)
T 3qyz_A          117 YKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR---DLKPSNL----------------------LLNTTCDLKICD  171 (364)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EECTTCCEEECC
T ss_pred             HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecC---CCChHhE----------------------EECCCCCEEEEe
Confidence            999988889999999999999999999999999999   9999999                      888899999999


Q ss_pred             cCCccCCCCCCC---CCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         156 FGLCKEGMGFGD---RTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       156 fg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      ||++........   .....+||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.
T Consensus       172 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  245 (364)
T 3qyz_A          172 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL  245 (364)
T ss_dssp             CTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHH
T ss_pred             CcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH
Confidence            999875332211   1344578999999998755 458999999999999999999999999887766666654


No 158
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=3.1e-37  Score=256.04  Aligned_cols=214  Identities=24%  Similarity=0.412  Sum_probs=170.9

Q ss_pred             CEeEEE-----ecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCc
Q psy3347           1 VILSQY-----RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~   74 (245)
                      ||+|.+     ..+++.||+|++....  .....+.+.+|   ++.++.+ +||||+++++++..++..++||||+++++
T Consensus        39 V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E---~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  113 (313)
T 1t46_A           39 VVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSE---LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD  113 (313)
T ss_dssp             EEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHH---HHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEE
T ss_pred             eEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHH---HHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCC
Confidence            688875     4578899999998643  22233444444   6667777 89999999999999999999999999999


Q ss_pred             hhhhhhhc-------------------CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccC
Q psy3347          75 LMMHIHAD-------------------VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVN  135 (245)
Q Consensus        75 L~~~~~~~-------------------~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~  135 (245)
                      |.+++...                   .+++..+..++.|++.||+|||++|++|+   |++|+||              
T Consensus       114 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---dlkp~Ni--------------  176 (313)
T 1t46_A          114 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHR---DLAARNI--------------  176 (313)
T ss_dssp             HHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE--------------
T ss_pred             HHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecC---CCccceE--------------
Confidence            99988543                   38899999999999999999999999999   9999998              


Q ss_pred             cccchhccccCCCCceEEeecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q psy3347         136 SSQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPF  212 (245)
Q Consensus       136 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf  212 (245)
                              +++.++.+||+|||++........  ......++..|+|||.+.+..++.++||||||+++|+|++ |..||
T Consensus       177 --------l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~  248 (313)
T 1t46_A          177 --------LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY  248 (313)
T ss_dssp             --------EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             --------EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence                    788889999999999875433222  1223456778999999988889999999999999999999 99999


Q ss_pred             CCCCHHHHHHHHhc-C-cccCCCCCChhHHhhhc
Q psy3347         213 PGDDEEEVFDSIVN-D-EVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       213 ~~~~~~~~~~~~~~-~-~~~~p~~~~~~~~~li~  244 (245)
                      .+............ . ....|..+++++.++|+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  282 (313)
T 1t46_A          249 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK  282 (313)
T ss_dssp             TTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHH
T ss_pred             CcccchhHHHHHhccCCCCCCcccCCHHHHHHHH
Confidence            87765444444333 2 22346788999998886


No 159
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=3.6e-36  Score=247.36  Aligned_cols=212  Identities=23%  Similarity=0.396  Sum_probs=170.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee----CCeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT----EAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~----~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|.+..++..||+|++...... ....+.+.   +++..++.++||||+++++++..    .+..++||||+++++|.
T Consensus        42 Vy~~~~~~~~~~va~k~~~~~~~~-~~~~~~~~---~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~  117 (290)
T 1t4h_A           42 VYKGLDTETTVEVAWCELQDRKLT-KSERQRFK---EEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLK  117 (290)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHH---HHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHH
T ss_pred             EEEeEecCCceEEEEEEecchhhC-HHHHHHHH---HHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHH
Confidence            799999999999999999864322 23333443   45778889999999999999865    35789999999999999


Q ss_pred             hhhhh-cCCChHHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccC-CCCceE
Q psy3347          77 MHIHA-DVFSEPRAVFYAACVVLGLQYLHESR--IIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVND-TEGYVK  152 (245)
Q Consensus        77 ~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k  152 (245)
                      +++.. ..+++..+..++.|++.||.|||++|  ++|+   |++|+||                      +++ .++.++
T Consensus       118 ~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~---dikp~Ni----------------------l~~~~~~~~k  172 (290)
T 1t4h_A          118 TYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHR---DLKCDNI----------------------FITGPTGSVK  172 (290)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCS---CCCGGGE----------------------EESSTTSCEE
T ss_pred             HHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEEC---CCCHHHE----------------------EEECCCCCEE
Confidence            99965 67899999999999999999999999  9999   8999888                      665 788999


Q ss_pred             EeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCcc--
Q psy3347         153 IADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE-EEVFDSIVNDEV--  229 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~-~~~~~~~~~~~~--  229 (245)
                      |+|||++.....  .......|++.|+|||.+.+ .++.++||||||+++|+|++|+.||.+... ......+.....  
T Consensus       173 l~Dfg~~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  249 (290)
T 1t4h_A          173 IGDLGLATLKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA  249 (290)
T ss_dssp             ECCTTGGGGCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG
T ss_pred             EeeCCCcccccc--cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCcc
Confidence            999999864322  22334578999999998864 588999999999999999999999987544 444444444322  


Q ss_pred             cCCCCCChhHHhhhc
Q psy3347         230 RYPRFLSLEAIAIMR  244 (245)
Q Consensus       230 ~~p~~~~~~~~~li~  244 (245)
                      .++...++++.+||+
T Consensus       250 ~~~~~~~~~l~~li~  264 (290)
T 1t4h_A          250 SFDKVAIPEVKEIIE  264 (290)
T ss_dssp             GGGGCCCHHHHHHHH
T ss_pred             ccCCCCCHHHHHHHH
Confidence            345677888888875


No 160
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=4.8e-37  Score=276.87  Aligned_cols=213  Identities=26%  Similarity=0.408  Sum_probs=173.0

Q ss_pred             CEeEEEec--CCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRN--TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|.++.  ++..||||+++...  .....+.+.+|   +++++.++||||+++++++.. +..++||||+.+|+|.++
T Consensus       352 Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E---~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~  425 (613)
T 2ozo_A          352 VRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMRE---AQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKF  425 (613)
T ss_dssp             EEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHH---HHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHH
T ss_pred             EEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHH---HHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHH
Confidence            78997764  56789999998642  22234445444   777889999999999999976 569999999999999998


Q ss_pred             hh--hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeec
Q psy3347          79 IH--ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADF  156 (245)
Q Consensus        79 ~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df  156 (245)
                      +.  ...+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+||
T Consensus       426 l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHr---Dlkp~NI----------------------Ll~~~~~vkL~DF  480 (613)
T 2ozo_A          426 LVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR---NLAARNV----------------------LLVNRHYAKISDF  480 (613)
T ss_dssp             HTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE----------------------EEEETTEEEECCC
T ss_pred             HhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcC---cCCHHHE----------------------EEcCCCcEEEeec
Confidence            85  3468999999999999999999999999999   9999898                      8888899999999


Q ss_pred             CCccCCCCCCCC---CCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-ccC
Q psy3347         157 GLCKEGMGFGDR---TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VRY  231 (245)
Q Consensus       157 g~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~  231 (245)
                      |+++........   .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.+.+..+....+..+. .+.
T Consensus       481 Gla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~  560 (613)
T 2ozo_A          481 GLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC  560 (613)
T ss_dssp             STTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCC
T ss_pred             cCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            999754222111   112234578999999988899999999999999999998 999999988888888887664 356


Q ss_pred             CCCCChhHHhhhc
Q psy3347         232 PRFLSLEAIAIMR  244 (245)
Q Consensus       232 p~~~~~~~~~li~  244 (245)
                      |..+++++.+||+
T Consensus       561 p~~~~~~l~~li~  573 (613)
T 2ozo_A          561 PPECPPELYALMS  573 (613)
T ss_dssp             CTTCCHHHHHHHH
T ss_pred             CCcCCHHHHHHHH
Confidence            8889999999986


No 161
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=5.7e-37  Score=264.97  Aligned_cols=217  Identities=30%  Similarity=0.510  Sum_probs=160.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchh--hHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARD--EVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|.++.+++.||+|++.........  .........+++++++.++||||+++++++. .+..++||||+++++|.++
T Consensus       151 V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~e~~~~g~L~~~  229 (419)
T 3i6u_A          151 VKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDK  229 (419)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEEECCTTCBGGGG
T ss_pred             EEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEEEcCCCCcHHHH
Confidence            799999999999999999865322111  1111112234577788999999999999985 4568999999999999888


Q ss_pred             hh-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC---CCceEEe
Q psy3347          79 IH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT---EGYVKIA  154 (245)
Q Consensus        79 ~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~kl~  154 (245)
                      +. ...+++..+..++.|++.||+|||++||+||   |+||+||                      +++.   ++.+||+
T Consensus       230 l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHr---Dlkp~NI----------------------ll~~~~~~~~~kl~  284 (419)
T 3i6u_A          230 VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR---DLKPENV----------------------LLSSQEEDCLIKIT  284 (419)
T ss_dssp             TSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EESSSSSSCCEEEC
T ss_pred             HhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---CCChHhE----------------------EEecCCCcceEEEe
Confidence            74 4578999999999999999999999999999   8888888                      5543   4469999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCccccccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCccc
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE---TSYTRAVDWWGLGVLIFEMLVGESPFPGDDE-EEVFDSIVNDEVR  230 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~~g~~pf~~~~~-~~~~~~~~~~~~~  230 (245)
                      |||+++... ........+||+.|+|||.+.+   ..++.++|||||||++|+|++|..||.+... ......+..+...
T Consensus       285 DFG~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~  363 (419)
T 3i6u_A          285 DFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN  363 (419)
T ss_dssp             CSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCC
T ss_pred             ecccceecC-CCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCC
Confidence            999997532 2223445678999999999853   5678899999999999999999999976533 3344445554443


Q ss_pred             CC----CCCChhHHhhhc
Q psy3347         231 YP----RFLSLEAIAIMR  244 (245)
Q Consensus       231 ~p----~~~~~~~~~li~  244 (245)
                      ++    ..+++++++||+
T Consensus       364 ~~~~~~~~~~~~~~~li~  381 (419)
T 3i6u_A          364 FIPEVWAEVSEKALDLVK  381 (419)
T ss_dssp             CCHHHHTTSCHHHHHHHH
T ss_pred             CCchhhcccCHHHHHHHH
Confidence            32    568888888875


No 162
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=2e-36  Score=247.87  Aligned_cols=226  Identities=23%  Similarity=0.254  Sum_probs=164.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|+++.+|+.||+|++....... .....+.+   ++..+..+ +||||+++++++..++..++||||+++++|.+++
T Consensus        27 V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~---e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l  102 (289)
T 1x8b_A           27 VFKCVKRLDGCIYAIKRSKKPLAGS-VDEQNALR---EVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI  102 (289)
T ss_dssp             EEEEEETTTCCEEEEEEEECCCTTS-HHHHHHHH---HHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHH
T ss_pred             EEEEEEcCCCceEEEEEeccccccc-HHHHHHHH---HHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHH
Confidence            7999999999999999998643222 22233333   35556666 8999999999999999999999999999999988


Q ss_pred             hh-----cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCc--ccchhccccCCCCceE
Q psy3347          80 HA-----DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNS--SQEIKLTVNDTEGYVK  152 (245)
Q Consensus        80 ~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~k  152 (245)
                      ..     ..+++..+..++.|++.||+|||++|++|+   |++|+||     ++...-....  .........+....++
T Consensus       103 ~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~---Dikp~NI-----l~~~~~~~~~~~~~~~~~~~~~~~~~~k  174 (289)
T 1x8b_A          103 SENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHM---DIKPSNI-----FISRTSIPNAASEEGDEDDWASNKVMFK  174 (289)
T ss_dssp             HHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE-----EEC--------------------CCCEE
T ss_pred             HhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeec---CCCHHHE-----EEcCCCCCcccccccccccccCCceEEE
Confidence            53     568999999999999999999999999999   8888887     2211000000  0000000001445799


Q ss_pred             EeecCCccCCCCCCCCCCcccCCCCccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-ccc
Q psy3347         153 IADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVND-EVR  230 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~-~~~  230 (245)
                      |+|||.+......    ....|+..|+|||.+.+. .++.++||||||+++|+|++|.+|+.....   ...+..+ ...
T Consensus       175 l~Dfg~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~~~~~~~~~  247 (289)
T 1x8b_A          175 IGDLGHVTRISSP----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WHEIRQGRLPR  247 (289)
T ss_dssp             ECCCTTCEETTCS----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---HHHHHTTCCCC
T ss_pred             EcccccccccCCc----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---HHHHHcCCCCC
Confidence            9999998753222    234588999999999765 566899999999999999999987754432   2333333 345


Q ss_pred             CCCCCChhHHhhhcC
Q psy3347         231 YPRFLSLEAIAIMRR  245 (245)
Q Consensus       231 ~p~~~~~~~~~li~~  245 (245)
                      +|..+++++++||++
T Consensus       248 ~~~~~~~~~~~li~~  262 (289)
T 1x8b_A          248 IPQVLSQEFTELLKV  262 (289)
T ss_dssp             CSSCCCHHHHHHHHH
T ss_pred             CCcccCHHHHHHHHH
Confidence            678899999998863


No 163
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=2e-36  Score=248.62  Aligned_cols=214  Identities=27%  Similarity=0.489  Sum_probs=174.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh-
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI-   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~-   79 (245)
                      ||+|+++.+|+.||+|++...... ....+.+.+   +++.++.++||||+++++++...+..+++||++++++|.+++ 
T Consensus        38 V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~---e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  113 (287)
T 2wei_A           38 VLKCKDRITQQEYAVKVINKASAK-NKDTSTILR---EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII  113 (287)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHH---HHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             EEEEEEcCCCcEEEEEEecccccc-hHHHHHHHH---HHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHH
Confidence            799999999999999999764322 222344444   467788899999999999999999999999999999998877 


Q ss_pred             hhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC---CCceEEeec
Q psy3347          80 HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT---EGYVKIADF  156 (245)
Q Consensus        80 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~kl~Df  156 (245)
                      ....+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.   ++.++|+||
T Consensus       114 ~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~---dl~p~NI----------------------lv~~~~~~~~~kL~Df  168 (287)
T 2wei_A          114 KRKRFSEHDAARIIKQVFSGITYMHKHNIVHR---DLKPENI----------------------LLESKEKDCDIKIIDF  168 (287)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EESCSSTTCCEEECST
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc---CCChhhE----------------------EEecCCCcccEEEecc
Confidence            45679999999999999999999999999999   8888888                      5543   457999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC----
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP----  232 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p----  232 (245)
                      |++...... .......++..|+|||.+.+ .++.++|+||||+++|+|++|+.||.+.+..+....+..+...++    
T Consensus       169 g~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  246 (287)
T 2wei_A          169 GLSTCFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW  246 (287)
T ss_dssp             TGGGTBCCC-SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGG
T ss_pred             CcceeecCC-CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhh
Confidence            998753222 22334457889999999865 488999999999999999999999999888888888877655432    


Q ss_pred             CCCChhHHhhhcC
Q psy3347         233 RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ~~~~~~~~~li~~  245 (245)
                      ..++++++++|++
T Consensus       247 ~~~~~~~~~li~~  259 (287)
T 2wei_A          247 RTISDDAKDLIRK  259 (287)
T ss_dssp             TTSCHHHHHHHHH
T ss_pred             hhcCHHHHHHHHH
Confidence            5788899888763


No 164
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=3.7e-37  Score=261.45  Aligned_cols=182  Identities=16%  Similarity=0.264  Sum_probs=149.8

Q ss_pred             CEeE-----EEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCch
Q psy3347           1 VILS-----QYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a-----~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L   75 (245)
                      ||+|     .+..+++.||+|+++...      ...+.+|.++++.++...|+||+++++++..++..++||||+++|+|
T Consensus        81 Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L  154 (365)
T 3e7e_A           81 VYEATQGDLNDAKNKQKFVLKVQKPAN------PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTL  154 (365)
T ss_dssp             EEEEEC-------CCCCEEEEEESSCC------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBH
T ss_pred             EEEEEecCCcccccCcEEEEEEeCCCC------hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcH
Confidence            7899     577789999999997542      23445555556666666699999999999999999999999999999


Q ss_pred             hhhhh------hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC--
Q psy3347          76 MMHIH------ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT--  147 (245)
Q Consensus        76 ~~~~~------~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~--  147 (245)
                      .+++.      ...+++..+..++.|++.||+|||++||+||   |+||+||                      +++.  
T Consensus       155 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHr---DiKp~NI----------------------ll~~~~  209 (365)
T 3e7e_A          155 LNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHG---DIKPDNF----------------------ILGNGF  209 (365)
T ss_dssp             HHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECC---CCSGGGE----------------------EECGGG
T ss_pred             HHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecC---CCCHHHE----------------------Eecccc
Confidence            99985      3468999999999999999999999999999   8888888                      5555  


Q ss_pred             ---------CCceEEeecCCccCCC--CCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q psy3347         148 ---------EGYVKIADFGLCKEGM--GFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFP  213 (245)
Q Consensus       148 ---------~~~~kl~Dfg~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~  213 (245)
                               ++.+||+|||+++...  .........+||..|+|||.+.+..++.++|||||||++|||++|+.||.
T Consensus       210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  286 (365)
T 3e7e_A          210 LEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKV  286 (365)
T ss_dssp             TCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCE
T ss_pred             cCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccc
Confidence                     7899999999996422  12223445678999999999999889999999999999999999999984


No 165
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.9e-36  Score=250.59  Aligned_cols=194  Identities=25%  Similarity=0.397  Sum_probs=158.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEe--------------eCCeEEEE
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ--------------TEAHVCFV   66 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~--------------~~~~~~lv   66 (245)
                      ||+|++..+|+.||+|++....   ....+.+.   ++++.++.++||||+++++++.              ..+..++|
T Consensus        27 V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~---~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  100 (320)
T 2i6l_A           27 VFSAVDNDCDKRVAIKKIVLTD---PQSVKHAL---REIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIV  100 (320)
T ss_dssp             EEEEEETTTTEEEEEEEEECCS---HHHHHHHH---HHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEE
T ss_pred             EEEEEECCCCeEEEEEEEecCC---hHHHHHHH---HHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEE
Confidence            7999999999999999997542   23334444   4477788999999999999873              34688999


Q ss_pred             EeeccCCchhhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccC
Q psy3347          67 MEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVND  146 (245)
Q Consensus        67 ~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~  146 (245)
                      |||++ ++|.+++..+.+++..+..++.|++.||+|||++|++|+   |++|+||                      +++
T Consensus       101 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---dlkp~Ni----------------------l~~  154 (320)
T 2i6l_A          101 QEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHR---DLKPANL----------------------FIN  154 (320)
T ss_dssp             EECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCC---CCSGGGE----------------------EEE
T ss_pred             eeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecC---CCCHHHE----------------------EEc
Confidence            99997 599999988889999999999999999999999999999   8888888                      665


Q ss_pred             -CCCceEEeecCCccCCCCC---CCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q psy3347         147 -TEGYVKIADFGLCKEGMGF---GDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVF  221 (245)
Q Consensus       147 -~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~  221 (245)
                       .++.+||+|||++......   ........++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.+.+..+..
T Consensus       155 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~  234 (320)
T 2i6l_A          155 TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM  234 (320)
T ss_dssp             TTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             CCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence             5678999999998753221   112334467889999999865 67889999999999999999999999988877766


Q ss_pred             HHHhc
Q psy3347         222 DSIVN  226 (245)
Q Consensus       222 ~~~~~  226 (245)
                      ..+..
T Consensus       235 ~~~~~  239 (320)
T 2i6l_A          235 QLILE  239 (320)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66543


No 166
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=6.7e-37  Score=248.54  Aligned_cols=211  Identities=25%  Similarity=0.429  Sum_probs=175.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++. +++.||+|++......    .+.+.+   +++.++.++||||+++++++..++..+++|||+++++|.+++.
T Consensus        24 V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~---e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   95 (267)
T 3t9t_A           24 VHLGYWL-NKDKVAIKTIREGAMS----EEDFIE---EAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLR   95 (267)
T ss_dssp             EEEEEET-TTEEEEEEEECTTTBC----HHHHHH---HHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHH
T ss_pred             EEEEEec-CCCeEEEEEccccCCC----HHHHHH---HHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHh
Confidence            7899886 6789999999864321    233443   4677888999999999999999999999999999999999986


Q ss_pred             h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      .  ..+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.++|+|||+
T Consensus        96 ~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~---dl~p~Ni----------------------li~~~~~~kl~dfg~  150 (267)
T 3t9t_A           96 TQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR---DLAARNC----------------------LVGENQVIKVSDFGM  150 (267)
T ss_dssp             HTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---SCCGGGE----------------------EECGGGCEEECCTTG
T ss_pred             hCcccCCHHHHHHHHHHHHHHHHHHHhCCcccC---CCchheE----------------------EECCCCCEEEccccc
Confidence            4  458999999999999999999999999999   8999888                      778889999999999


Q ss_pred             ccCCCCCC-CCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-ccCCCCC
Q psy3347         159 CKEGMGFG-DRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VRYPRFL  235 (245)
Q Consensus       159 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~p~~~  235 (245)
                      +....... .......++..|+|||.+.+..++.++||||||+++|+|++ |+.||.+.+..+....+..+. ...|..+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~  230 (267)
T 3t9t_A          151 TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA  230 (267)
T ss_dssp             GGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTS
T ss_pred             ccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccC
Confidence            87532211 11223345678999999988889999999999999999999 999999988888888877653 3457788


Q ss_pred             ChhHHhhhc
Q psy3347         236 SLEAIAIMR  244 (245)
Q Consensus       236 ~~~~~~li~  244 (245)
                      ++++.++|+
T Consensus       231 ~~~l~~li~  239 (267)
T 3t9t_A          231 STHVYQIMN  239 (267)
T ss_dssp             CHHHHHHHH
T ss_pred             cHHHHHHHH
Confidence            999988875


No 167
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=2.6e-36  Score=246.16  Aligned_cols=214  Identities=24%  Similarity=0.391  Sum_probs=170.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.++.+|+.||+|++.....  ....+.+.+   +++.++.++||||+++++++..++..++||||+++++|.+++.
T Consensus        23 V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~---e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   97 (276)
T 2yex_A           23 VQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE   97 (276)
T ss_dssp             EEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHH---HHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSB
T ss_pred             EEEEEECCCCcEEEEEEeeeccc--hhhhHHHHH---HHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHh
Confidence            79999999999999999975432  222334444   4677888899999999999999999999999999999999886


Q ss_pred             h-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          81 A-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        81 ~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                      . ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||++
T Consensus        98 ~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~---dl~p~Ni----------------------l~~~~~~~kl~dfg~~  152 (276)
T 2yex_A           98 PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR---DIKPENL----------------------LLDERDNLKISDFGLA  152 (276)
T ss_dssp             TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECTTCCEEECCCTTC
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHhCCeecc---CCChHHE----------------------EEccCCCEEEeeCCCc
Confidence            4 468999999999999999999999999999   9999898                      8888899999999998


Q ss_pred             cCCCCC--CCCCCcccCCCCccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcCccc--CCC
Q psy3347         160 KEGMGF--GDRTGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEE-EVFDSIVNDEVR--YPR  233 (245)
Q Consensus       160 ~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~~g~~pf~~~~~~-~~~~~~~~~~~~--~p~  233 (245)
                      ......  ........|+..|+|||.+.+..+ +.++||||||+++|+|++|+.||.+.... .....+......  .+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  232 (276)
T 2yex_A          153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK  232 (276)
T ss_dssp             EECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGG
T ss_pred             cccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchh
Confidence            643211  112345578899999999987665 67899999999999999999999765432 223333332222  235


Q ss_pred             CCChhHHhhhc
Q psy3347         234 FLSLEAIAIMR  244 (245)
Q Consensus       234 ~~~~~~~~li~  244 (245)
                      .+++++++||+
T Consensus       233 ~~~~~~~~li~  243 (276)
T 2yex_A          233 KIDSAPLALLH  243 (276)
T ss_dssp             GSCHHHHHHHH
T ss_pred             hcCHHHHHHHH
Confidence            67888888875


No 168
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=2e-36  Score=248.59  Aligned_cols=213  Identities=21%  Similarity=0.317  Sum_probs=157.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|+++....  ........  .++...++.++||||+++++++..++..++||||+++ +|.+++.
T Consensus        23 V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~--~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~   97 (290)
T 3fme_A           23 VEKMRHVPSGQIMAVKRIRATVN--SQEQKRLL--MDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYK   97 (290)
T ss_dssp             EEEEEETTTTEEEEEEEEC---C--HHHHHHHH--HHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-EHHHHHH
T ss_pred             EEEEEecCCCeEEEEEEeecccC--cHHHHHHH--HHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-chHHHHH
Confidence            79999999999999999976421  12222222  2334457788999999999999999999999999975 7766653


Q ss_pred             -----hcCCChHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          81 -----ADVFSEPRAVFYAACVVLGLQYLHES-RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        81 -----~~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                           ...+++..+..++.|++.||+|||++ |++|+   |++|+||                      +++.++.++|+
T Consensus        98 ~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~---dlkp~Ni----------------------l~~~~~~~kl~  152 (290)
T 3fme_A           98 QVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR---DVKPSNV----------------------LINALGQVKMC  152 (290)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCC---CCSGGGC----------------------EECTTCCEEBC
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC---CCCHHHE----------------------EECCCCCEEEe
Confidence                 35799999999999999999999998 99999   9999999                      88889999999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCccccccc----cCCCCCcchhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhcC-c
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVL----TETSYTRAVDWWGLGVLIFEMLVGESPFPG-DDEEEVFDSIVND-E  228 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~DvwslG~~l~el~~g~~pf~~-~~~~~~~~~~~~~-~  228 (245)
                      |||++...... .......|++.|+|||.+    .+..++.++||||||+++|+|++|+.||.. ............. .
T Consensus       153 Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  231 (290)
T 3fme_A          153 DFGISGYLVDD-VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS  231 (290)
T ss_dssp             CC----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC
T ss_pred             ecCCccccccc-ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC
Confidence            99998753222 223344688999999996    455788999999999999999999999975 3444444444433 3


Q ss_pred             ccC-CCCCChhHHhhhc
Q psy3347         229 VRY-PRFLSLEAIAIMR  244 (245)
Q Consensus       229 ~~~-p~~~~~~~~~li~  244 (245)
                      ... +..+++++.+||+
T Consensus       232 ~~~~~~~~~~~~~~li~  248 (290)
T 3fme_A          232 PQLPADKFSAEFVDFTS  248 (290)
T ss_dssp             CCCCTTTSCHHHHHHHH
T ss_pred             CCcccccCCHHHHHHHH
Confidence            333 3578899998875


No 169
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=4.5e-37  Score=277.91  Aligned_cols=214  Identities=24%  Similarity=0.374  Sum_probs=173.1

Q ss_pred             CEeEEE--ecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQY--RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|.+  +.+++.||||+++.... .....+.+.+|   +++++.++||||+++++++.. +..++||||+++++|.++
T Consensus       385 Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E---~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~  459 (635)
T 4fl3_A          385 VKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAE---ANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKY  459 (635)
T ss_dssp             EEEEEEECSSCEEEEEEEEECGGGG-CGGGHHHHHHH---HHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHH
T ss_pred             EEEEEEcCCCcceEEEEEEeccccC-CHHHHHHHHHH---HHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCCCHHHH
Confidence            789954  45678999999986432 22223445444   677888899999999999964 458899999999999999


Q ss_pred             hhh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          79 IHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        79 ~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      ++. ..+++..+..++.|++.||+|||++||+||   |+||+||                      +++.++.+||+|||
T Consensus       460 l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHr---DLkp~NI----------------------Ll~~~~~~kL~DFG  514 (635)
T 4fl3_A          460 LQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR---DLAARNV----------------------LLVTQHYAKISDFG  514 (635)
T ss_dssp             HHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE----------------------EEEETTEEEECCTT
T ss_pred             HhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCC---CCChHhE----------------------EEeCCCCEEEEEcC
Confidence            864 468999999999999999999999999999   9999998                      88888999999999


Q ss_pred             CccCCCCCCC---CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-ccCC
Q psy3347         158 LCKEGMGFGD---RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VRYP  232 (245)
Q Consensus       158 ~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~p  232 (245)
                      +++.......   ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.+.+..+....+..+. ...|
T Consensus       515 la~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p  594 (635)
T 4fl3_A          515 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP  594 (635)
T ss_dssp             HHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC
T ss_pred             CccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            9875332221   1223345678999999998899999999999999999998 999999999888888887664 3568


Q ss_pred             CCCChhHHhhhc
Q psy3347         233 RFLSLEAIAIMR  244 (245)
Q Consensus       233 ~~~~~~~~~li~  244 (245)
                      ..+++++.+||+
T Consensus       595 ~~~~~~l~~li~  606 (635)
T 4fl3_A          595 AGCPREMYDLMN  606 (635)
T ss_dssp             TTCCHHHHHHHH
T ss_pred             CCCCHHHHHHHH
Confidence            899999999986


No 170
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=5.4e-37  Score=256.30  Aligned_cols=212  Identities=17%  Similarity=0.255  Sum_probs=160.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC-------------------
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA-------------------   61 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~-------------------   61 (245)
                      ||+|+++.+|+.||||+++...  .....+.+.   +++++++.++||||++++++|...+                   
T Consensus        22 V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~---~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (332)
T 3qd2_B           22 VFEAKNKVDDCNYAIKRIRLPN--RELAREKVM---REVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTD   96 (332)
T ss_dssp             EEEEEETTTCCEEEEEEEECCS--TTTHHHHHH---HHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---------
T ss_pred             EEEEEEcCCCcEEEEEEeecCC--chhHHHHHH---HHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhcccccc
Confidence            7999999999999999998543  222334444   4477888999999999999985543                   


Q ss_pred             --------------------------------------eEEEEEeeccCCchhhhhhhc----CCChHHHHHHHHHHHHH
Q psy3347          62 --------------------------------------HVCFVMEYAAGGDLMMHIHAD----VFSEPRAVFYAACVVLG   99 (245)
Q Consensus        62 --------------------------------------~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~   99 (245)
                                                            +.+++|||+++++|.+++...    ..++..+..++.|++.|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~a  176 (332)
T 3qd2_B           97 WPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEA  176 (332)
T ss_dssp             -----------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHH
T ss_pred             ccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHH
Confidence                                                  489999999999999999653    24555688999999999


Q ss_pred             HHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCccCCCCCC------------C
Q psy3347         100 LQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFG------------D  167 (245)
Q Consensus       100 l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------~  167 (245)
                      |+|||++|++||   |+||+||                      +++.++.+||+|||+++......            .
T Consensus       177 L~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~  231 (332)
T 3qd2_B          177 VEFLHSKGLMHR---DLKPSNI----------------------FFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA  231 (332)
T ss_dssp             HHHHHHTTEECC---CCCGGGE----------------------EECTTCCEEECCCTTCEECSCC--------------
T ss_pred             HHHHHhCCeeec---CCCcccE----------------------EEeCCCCEEEeecCcccccccchhhccccccccccc
Confidence            999999999999   9999999                      88889999999999987543321            1


Q ss_pred             CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCccc-CCCCCChhHHhhhc
Q psy3347         168 RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR-YPRFLSLEAIAIMR  244 (245)
Q Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~li~  244 (245)
                      ......||+.|+|||.+.+..++.++||||||+++|+|++|..|+..  .......+.....+ .+...++++++||+
T Consensus       232 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~  307 (332)
T 3qd2_B          232 THTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFPLLFTQKYPQEHMMVQ  307 (332)
T ss_dssp             CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCCHHHHHHCHHHHHHHH
T ss_pred             cccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCCcccccCChhHHHHHH
Confidence            22345689999999999998999999999999999999998776522  22222333332221 12344556666654


No 171
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=3.1e-37  Score=261.88  Aligned_cols=189  Identities=16%  Similarity=0.189  Sum_probs=150.9

Q ss_pred             CEeEEEecC-----CcEEEEEEeecccccchhhHHHHHH-----HHHHHHHHhhcCCCceeeeeEEEeeC----CeEEEE
Q psy3347           1 VILSQYRNT-----GEYFAIKALKKGDIIARDEVESLLS-----EKRIFEVANTMRHPFLVNLFACFQTE----AHVCFV   66 (245)
Q Consensus         1 V~~a~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~-----e~~~~~~l~~~~h~ni~~~~~~~~~~----~~~~lv   66 (245)
                      ||+|.++.+     ++.||+|++.........+.+.+.+     ..+++..++.++||||+++++++...    .+.++|
T Consensus        51 Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv  130 (364)
T 3op5_A           51 IYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMI  130 (364)
T ss_dssp             EEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEE
T ss_pred             EEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEE
Confidence            799988775     5899999998653221122221111     12334456788999999999998764    568999


Q ss_pred             EeeccCCchhhhhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccc
Q psy3347          67 MEYAAGGDLMMHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTV  144 (245)
Q Consensus        67 ~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~  144 (245)
                      |||+ +++|.+++..  ..+++..+..++.|++.||+|||++||+||   |+||+||                      +
T Consensus       131 ~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHr---Dlkp~Ni----------------------l  184 (364)
T 3op5_A          131 MDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHG---DIKASNL----------------------L  184 (364)
T ss_dssp             EECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------E
T ss_pred             EeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEe---cCCHHHE----------------------E
Confidence            9999 8899999854  569999999999999999999999999999   8999888                      6


Q ss_pred             cC--CCCceEEeecCCccCCCCCCC-------CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q psy3347         145 ND--TEGYVKIADFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD  215 (245)
Q Consensus       145 ~~--~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~  215 (245)
                      ++  .++.+||+|||+++.......       ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||.+.
T Consensus       185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~  264 (364)
T 3op5_A          185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN  264 (364)
T ss_dssp             EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            66  789999999999964322211       123445899999999999988999999999999999999999999753


No 172
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=4.6e-37  Score=259.07  Aligned_cols=218  Identities=18%  Similarity=0.154  Sum_probs=165.9

Q ss_pred             CEeEEEec---CCcEEEEEEeecccccchhhHHHHH-----HHHHHHHHHhhcCCCceeeeeEEEee----CCeEEEEEe
Q psy3347           1 VILSQYRN---TGEYFAIKALKKGDIIARDEVESLL-----SEKRIFEVANTMRHPFLVNLFACFQT----EAHVCFVME   68 (245)
Q Consensus         1 V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~-----~e~~~~~~l~~~~h~ni~~~~~~~~~----~~~~~lv~e   68 (245)
                      ||+|++..   ++..+|+|++.........+.+.+.     ...+++..++.++||||+++++++..    .+..++|||
T Consensus        53 Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  132 (345)
T 2v62_A           53 IYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVME  132 (345)
T ss_dssp             EEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEE
T ss_pred             EEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccCCCcEEEEEEe
Confidence            79999987   8999999999865322111111111     12345677788899999999999987    678999999


Q ss_pred             eccCCchhhhhhh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC
Q psy3347          69 YAAGGDLMMHIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT  147 (245)
Q Consensus        69 ~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~  147 (245)
                      |+ +++|.+++.. ..+++..+..++.|++.||+|||++||+||   |+||+||                      +++.
T Consensus       133 ~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~---Dlkp~NI----------------------ll~~  186 (345)
T 2v62_A          133 RL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHG---DIKAANL----------------------LLGY  186 (345)
T ss_dssp             CE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EEES
T ss_pred             cc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC---CcCHHHE----------------------EEcc
Confidence            99 8899999854 479999999999999999999999999999   8889888                      6666


Q ss_pred             CC--ceEEeecCCccCCCCCCC-------CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC--C
Q psy3347         148 EG--YVKIADFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD--D  216 (245)
Q Consensus       148 ~~--~~kl~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~--~  216 (245)
                      ++  .+||+|||+++.......       ......|+..|+|||.+.+..++.++|||||||++|+|++|+.||.+.  .
T Consensus       187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~  266 (345)
T 2v62_A          187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD  266 (345)
T ss_dssp             SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred             CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence            66  999999999975322111       113457899999999999888999999999999999999999999642  2


Q ss_pred             HHHHHHHHhcCcccCC---------CCCChhHHhhhc
Q psy3347         217 EEEVFDSIVNDEVRYP---------RFLSLEAIAIMR  244 (245)
Q Consensus       217 ~~~~~~~~~~~~~~~p---------~~~~~~~~~li~  244 (245)
                      ..............+|         ..++++++++|+
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  303 (345)
T 2v62_A          267 PVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLV  303 (345)
T ss_dssp             HHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHH
T ss_pred             cHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHH
Confidence            2222222211111222         278888888875


No 173
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=1.2e-36  Score=252.78  Aligned_cols=215  Identities=21%  Similarity=0.367  Sum_probs=166.7

Q ss_pred             CEeEEEec---CCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC-----eEEEEEeeccC
Q psy3347           1 VILSQYRN---TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA-----HVCFVMEYAAG   72 (245)
Q Consensus         1 V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~-----~~~lv~e~~~~   72 (245)
                      ||+|++..   +++.||+|+++.... .....+.+.   +++..++.++||||+++++++...+     ..+++|||+++
T Consensus        50 V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~---~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~  125 (313)
T 3brb_A           50 VMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFL---SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKY  125 (313)
T ss_dssp             EEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHH---HHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTT
T ss_pred             EEEEEEeccCCceeEEEEEEEecccc-chhHHHHHH---HHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccC
Confidence            68898775   566899999976432 222333444   4477788999999999999997654     45999999999


Q ss_pred             Cchhhhhh-------hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc
Q psy3347          73 GDLMMHIH-------ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN  145 (245)
Q Consensus        73 ~~L~~~~~-------~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~  145 (245)
                      ++|.+++.       ...+++..+..++.|++.||.|||++|++|+   |++|+||                      ++
T Consensus       126 ~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~---dikp~NI----------------------li  180 (313)
T 3brb_A          126 GDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHR---DLAARNC----------------------ML  180 (313)
T ss_dssp             CBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCC---CCSGGGE----------------------EE
T ss_pred             CCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccC---CCCcceE----------------------EE
Confidence            99998873       2358999999999999999999999999999   9999999                      88


Q ss_pred             CCCCceEEeecCCccCCCCCC--CCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy3347         146 DTEGYVKIADFGLCKEGMGFG--DRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFD  222 (245)
Q Consensus       146 ~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~  222 (245)
                      +.++.+||+|||++.......  .......++..|+|||.+.+..++.++||||||+++|+|++ |..||.+....+...
T Consensus       181 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  260 (313)
T 3brb_A          181 RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD  260 (313)
T ss_dssp             CTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred             cCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH
Confidence            889999999999987532221  11223456778999999998899999999999999999999 999999888877777


Q ss_pred             HHhcC-cccCCCCCChhHHhhhc
Q psy3347         223 SIVND-EVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       223 ~~~~~-~~~~p~~~~~~~~~li~  244 (245)
                      .+..+ ....|..+++++.++|+
T Consensus       261 ~~~~~~~~~~~~~~~~~l~~li~  283 (313)
T 3brb_A          261 YLLHGHRLKQPEDCLDELYEIMY  283 (313)
T ss_dssp             HHHTTCCCCCBTTCCHHHHHHHH
T ss_pred             HHHcCCCCCCCccccHHHHHHHH
Confidence            77665 34567889999998875


No 174
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=8e-37  Score=251.51  Aligned_cols=214  Identities=24%  Similarity=0.356  Sum_probs=171.3

Q ss_pred             CEeEEE--ecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQY--RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|.+  ..+++.||+|+++.... .....+.+.   ++++.++.++||||+++++++ ..+..++||||+++++|.++
T Consensus        33 Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~---~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~  107 (291)
T 1xbb_A           33 VKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELL---AEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKY  107 (291)
T ss_dssp             EEEEEEECSSSEEEEEEEEEC------CHHHHHHH---HHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHH
T ss_pred             eEeeeecCCCceeeEEEEeeccccc-CHHHHHHHH---HHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHH
Confidence            788944  56789999999986432 122233444   447778888999999999999 56678999999999999999


Q ss_pred             hhh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          79 IHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        79 ~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      +.. ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||
T Consensus       108 l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~---dikp~Ni----------------------l~~~~~~~kl~Dfg  162 (291)
T 1xbb_A          108 LQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR---DLAARNV----------------------LLVTQHYAKISDFG  162 (291)
T ss_dssp             HHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EEEETTEEEECCCT
T ss_pred             HHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcC---CCCcceE----------------------EEeCCCcEEEccCC
Confidence            864 468999999999999999999999999999   9999888                      77888999999999


Q ss_pred             CccCCCCCCCC---CCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-ccCC
Q psy3347         158 LCKEGMGFGDR---TGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VRYP  232 (245)
Q Consensus       158 ~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~p  232 (245)
                      ++.........   .....++..|+|||.+.+..++.++||||||+++|+|++ |+.||.+.+..+....+..+. ...|
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  242 (291)
T 1xbb_A          163 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP  242 (291)
T ss_dssp             TCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC
T ss_pred             cceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            98753222211   122345678999999988889999999999999999999 999999988888777776654 3567


Q ss_pred             CCCChhHHhhhc
Q psy3347         233 RFLSLEAIAIMR  244 (245)
Q Consensus       233 ~~~~~~~~~li~  244 (245)
                      ..+++++.++|+
T Consensus       243 ~~~~~~l~~li~  254 (291)
T 1xbb_A          243 AGCPREMYDLMN  254 (291)
T ss_dssp             TTCCHHHHHHHH
T ss_pred             CCCCHHHHHHHH
Confidence            889999999886


No 175
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=1.2e-36  Score=257.66  Aligned_cols=187  Identities=26%  Similarity=0.476  Sum_probs=157.7

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|++....  .....+.+   .++++.++.++||||+++++++..++..++||||+++++|.++++
T Consensus        49 V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~---~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  123 (360)
T 3eqc_A           49 VFKVSHKPSGLVMARKLIHLEI--KPAIRNQI---IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK  123 (360)
T ss_dssp             EEEEEETTTCCEEEEEEEECCC--CHHHHHHH---HHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHH
T ss_pred             EEEEEECCCCcEEEEEEecccc--CHHHHHHH---HHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHH
Confidence            7999999999999999998642  22223334   344777889999999999999999999999999999999999985


Q ss_pred             h-cCCChHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 A-DVFSEPRAVFYAACVVLGLQYLHES-RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~-~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      . ..+++..+..++.|++.||.|||+. |++|+   |++|+||                      +++.++.++|+|||+
T Consensus       124 ~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~---dlkp~Ni----------------------l~~~~~~~kl~Dfg~  178 (360)
T 3eqc_A          124 KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR---DVKPSNI----------------------LVNSRGEIKLCDFGV  178 (360)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCS---CCSGGGE----------------------EECTTCCEEECCCCC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcC---CccHHHE----------------------EECCCCCEEEEECCC
Confidence            4 5799999999999999999999996 99999   9999998                      888899999999998


Q ss_pred             ccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH
Q psy3347         159 CKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE  219 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~  219 (245)
                      +.....  .......|+..|+|||.+.+..++.++|||||||++|+|++|+.||...+..+
T Consensus       179 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  237 (360)
T 3eqc_A          179 SGQLID--SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE  237 (360)
T ss_dssp             CHHHHH--HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHH
T ss_pred             Cccccc--ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            863211  12334578999999999998899999999999999999999999998765543


No 176
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=9.5e-37  Score=263.69  Aligned_cols=188  Identities=22%  Similarity=0.399  Sum_probs=152.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC------CeEEEEEeeccCCc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE------AHVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~------~~~~lv~e~~~~~~   74 (245)
                      ||+|+++.+|+.||||++......       .   .+++++++.++||||++++++|...      .+.++||||+++ +
T Consensus        70 Vy~~~~~~~~~~vaiK~~~~~~~~-------~---~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~  138 (420)
T 1j1b_A           70 VYQAKLCDSGELVAIKKVLQDKRF-------K---NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-T  138 (420)
T ss_dssp             EEEEEETTTCCEEEEEEEECCTTS-------C---CHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-E
T ss_pred             EEEEEECCCCcEEEEEEecccchh-------H---HHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-c
Confidence            799999999999999999754211       1   2347778899999999999998542      247899999986 4


Q ss_pred             hhhhhh-----hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC-C
Q psy3347          75 LMMHIH-----ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT-E  148 (245)
Q Consensus        75 L~~~~~-----~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~-~  148 (245)
                      +...+.     ...+++..+..++.|++.||+|||++||+||   |+||+||                      +++. .
T Consensus       139 l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHr---Dlkp~NI----------------------Ll~~~~  193 (420)
T 1j1b_A          139 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHR---DIKPQNL----------------------LLDPDT  193 (420)
T ss_dssp             HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECS---CCSGGGE----------------------EEETTT
T ss_pred             HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccc---CCChhhE----------------------EEeCCC
Confidence            544432     3568999999999999999999999999999   8999888                      6664 4


Q ss_pred             CceEEeecCCccCCCCCCCCCCcccCCCCccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         149 GYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       149 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      +.+||+|||+++..... ......+||..|+|||.+.+. .++.++|||||||++|||++|+.||.+.+..+....+.
T Consensus       194 ~~~kl~DFG~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~  270 (420)
T 1j1b_A          194 AVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII  270 (420)
T ss_dssp             TEEEECCCTTCEECCTT-CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CeEEeccchhhhhcccC-CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            67899999999753222 233456789999999999764 68999999999999999999999999988776665554


No 177
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=3.8e-37  Score=257.19  Aligned_cols=181  Identities=23%  Similarity=0.315  Sum_probs=149.7

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC----eEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA----HVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~----~~~lv~e~~~~~~L~   76 (245)
                      ||+|++.  |+.||+|++....    ....   ...+++..++.++||||+++++++....    ..++||||+++++|.
T Consensus        40 Vy~~~~~--~~~vavK~~~~~~----~~~~---~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~  110 (322)
T 3soc_A           40 VWKAQLL--NEYVAVKIFPIQD----KQSW---QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLS  110 (322)
T ss_dssp             EEEEEET--TEEEEEEEECGGG----HHHH---HHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHH
T ss_pred             EEEEEEC--CCEEEEEEeecCc----hHHH---HHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHH
Confidence            7999775  8999999997532    1111   1233567788999999999999998743    579999999999999


Q ss_pred             hhhhhcCCChHHHHHHHHHHHHHHHHhhhc----------CccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccC
Q psy3347          77 MHIHADVFSEPRAVFYAACVVLGLQYLHES----------RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVND  146 (245)
Q Consensus        77 ~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~----------~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~  146 (245)
                      ++++...+++..+..++.|++.||+|||+.          |++||   |+||+||                      +++
T Consensus       111 ~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~---Dlkp~Ni----------------------ll~  165 (322)
T 3soc_A          111 DFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHR---DIKSKNV----------------------LLK  165 (322)
T ss_dssp             HHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECS---CCSGGGE----------------------EEC
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeC---CCChHhE----------------------EEC
Confidence            999888899999999999999999999999          99999   9999999                      888


Q ss_pred             CCCceEEeecCCccCCCCCCC--CCCcccCCCCccccccccCC-----CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q psy3347         147 TEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTET-----SYTRAVDWWGLGVLIFEMLVGESPFPGD  215 (245)
Q Consensus       147 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~-----~~~~~~DvwslG~~l~el~~g~~pf~~~  215 (245)
                      .++.+||+|||+++.......  ......||..|+|||.+.+.     .++.++|||||||++|+|++|+.||.+.
T Consensus       166 ~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~  241 (322)
T 3soc_A          166 NNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP  241 (322)
T ss_dssp             TTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred             CCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence            899999999999964322221  23345789999999999763     4557889999999999999999999653


No 178
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.5e-36  Score=248.03  Aligned_cols=214  Identities=22%  Similarity=0.366  Sum_probs=172.6

Q ss_pred             CEeEEEecCCc---EEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCe-EEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGE---YFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH-VCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~-~~lv~e~~~~~~L~   76 (245)
                      ||+|++..+++   .||+|++....  .....+.+.   ++++.++.++||||+++++++...+. .+++|||+.+++|.
T Consensus        37 Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~---~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~  111 (298)
T 3pls_A           37 VYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFL---REGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLL  111 (298)
T ss_dssp             EEEEEEECSSSCEEEEEEEEETTCC--SHHHHHHHH---HHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHH
T ss_pred             EEEEEEecCCCceeeeeeeeccccc--cHHHHHHHH---HHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHH
Confidence            79998776655   89999997532  223334444   44777888999999999999976654 49999999999999


Q ss_pred             hhhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          77 MHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        77 ~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      +++..  ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+
T Consensus       112 ~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~---dikp~Ni----------------------li~~~~~~kl~  166 (298)
T 3pls_A          112 QFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR---DLAARNC----------------------MLDESFTVKVA  166 (298)
T ss_dssp             HHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE----------------------EECTTCCEEEC
T ss_pred             HHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccC---CCCcceE----------------------EEcCCCcEEeC
Confidence            99864  568889999999999999999999999999   9999998                      88889999999


Q ss_pred             ecCCccCCCCCC----CCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-
Q psy3347         155 DFGLCKEGMGFG----DRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-  228 (245)
Q Consensus       155 Dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-  228 (245)
                      |||++.......    .......++..|+|||.+.+..++.++||||||+++|+|++ +.+||...+..+....+.... 
T Consensus       167 Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~  246 (298)
T 3pls_A          167 DFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR  246 (298)
T ss_dssp             CTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCC
T ss_pred             cCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCC
Confidence            999987432211    12334466788999999998899999999999999999999 566677777777777666554 


Q ss_pred             ccCCCCCChhHHhhhc
Q psy3347         229 VRYPRFLSLEAIAIMR  244 (245)
Q Consensus       229 ~~~p~~~~~~~~~li~  244 (245)
                      .+.|..+++++.++|+
T Consensus       247 ~~~~~~~~~~l~~li~  262 (298)
T 3pls_A          247 LPQPEYCPDSLYQVMQ  262 (298)
T ss_dssp             CCCCTTCCHHHHHHHH
T ss_pred             CCCCccchHHHHHHHH
Confidence            4567888999998875


No 179
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=5.8e-37  Score=256.64  Aligned_cols=213  Identities=22%  Similarity=0.350  Sum_probs=164.6

Q ss_pred             CEeEEEecCCcEE----EEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGEYF----AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~~v----aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|++..+|+.+    |+|.+....  .....+.+.   ++++.++.++||||+++++++..++ .++++|++.+++|.
T Consensus        31 Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~---~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~  104 (327)
T 3poz_A           31 VYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEIL---DEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL  104 (327)
T ss_dssp             EEEEEECC----CCEEEEEEEC---------CHHHHH---HHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCTTCBHH
T ss_pred             EEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHH---HHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecCCCcHH
Confidence            7999998887765    677665321  112233344   4467788889999999999998765 78999999999999


Q ss_pred             hhhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          77 MHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        77 ~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      +++..  ..+++..+..++.|++.||.|||++||+||   |+||+||                      +++.++.+||+
T Consensus       105 ~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~---Dikp~NI----------------------ll~~~~~~kl~  159 (327)
T 3poz_A          105 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR---DLAARNV----------------------LVKTPQHVKIT  159 (327)
T ss_dssp             HHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EEEETTEEEEC
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCC---CCChheE----------------------EECCCCCEEEc
Confidence            98854  468999999999999999999999999999   9999998                      78888999999


Q ss_pred             ecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-cc
Q psy3347         155 DFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VR  230 (245)
Q Consensus       155 Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~  230 (245)
                      |||+++.......  ......+|..|+|||.+.+..++.++||||||+++|+|++ |+.||.+.+..+....+..+. .+
T Consensus       160 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~  239 (327)
T 3poz_A          160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP  239 (327)
T ss_dssp             CTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC
T ss_pred             cCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCC
Confidence            9999874322211  1223345778999999999999999999999999999999 999999888777777665553 35


Q ss_pred             CCCCCChhHHhhhc
Q psy3347         231 YPRFLSLEAIAIMR  244 (245)
Q Consensus       231 ~p~~~~~~~~~li~  244 (245)
                      .|..+++++.++|.
T Consensus       240 ~~~~~~~~~~~li~  253 (327)
T 3poz_A          240 QPPICTIDVYMIMV  253 (327)
T ss_dssp             CCTTBCHHHHHHHH
T ss_pred             CCccCCHHHHHHHH
Confidence            67788888888875


No 180
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=1.1e-36  Score=252.92  Aligned_cols=211  Identities=20%  Similarity=0.336  Sum_probs=162.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++.   ..+|+|+++.... .....+.+.   +++++++.++||||+++++++. .+..++||||+++++|.+++.
T Consensus        52 Vy~~~~~---~~~avk~~k~~~~-~~~~~~~~~---~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~  123 (307)
T 3lb7_A           52 VYKGKWH---GDVAVKILKVVDP-TPEQFQAFR---NEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLH  123 (307)
T ss_dssp             EEEEESS---SEEEEEECCCSSC-CHHHHHHHH---HHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHH
T ss_pred             EEEEEEC---CEEEEEEEecCCC-CHHHHHHHH---HHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCcHHHHHH
Confidence            7888764   3599999876432 223334444   4577888999999999999875 456899999999999999885


Q ss_pred             --hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 --ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 --~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                        ...+++..+..++.|++.||+|||++|++|+   |+||+||                      +++.++.+||+|||+
T Consensus       124 ~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~kl~DFg~  178 (307)
T 3lb7_A          124 VQETKFQMFQLIDIARQTAQGMDYLHAKNIIHR---DMKSNNI----------------------FLHEGLTVKIGDFGL  178 (307)
T ss_dssp             TSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCSSSE----------------------EECTTSCEEECCCCS
T ss_pred             hcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeC---CCChhhE----------------------EEcCCCCEEEccCCC
Confidence              3568999999999999999999999999999   8999888                      888899999999999


Q ss_pred             ccCCCC--CCCCCCcccCCCCcccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCccc---
Q psy3347         159 CKEGMG--FGDRTGTFCGTPEFLAPEVLT---ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVR---  230 (245)
Q Consensus       159 ~~~~~~--~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~---  230 (245)
                      +.....  .........|+..|+|||.+.   +..++.++||||||+++|+|++|+.||.+....+....+......   
T Consensus       179 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~  258 (307)
T 3lb7_A          179 ATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD  258 (307)
T ss_dssp             SCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCC
T ss_pred             ceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcc
Confidence            874321  122234557899999999996   566888999999999999999999999876655544444322221   


Q ss_pred             ---CCCCCChhHHhhhc
Q psy3347         231 ---YPRFLSLEAIAIMR  244 (245)
Q Consensus       231 ---~p~~~~~~~~~li~  244 (245)
                         .+..+++++.+||+
T Consensus       259 ~~~~~~~~~~~l~~li~  275 (307)
T 3lb7_A          259 LSKLYKNCPKAMKRLVA  275 (307)
T ss_dssp             STTSCSSSCHHHHHHHH
T ss_pred             hhhhhcCCcHHHHHHHH
Confidence               23577888888875


No 181
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=7.2e-37  Score=266.77  Aligned_cols=210  Identities=25%  Similarity=0.375  Sum_probs=169.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.+.. +..||||+++....    ..+.+.+   ++++++.++||||+++++++.. +..++||||+++|+|.++++
T Consensus       200 Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~---E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~  270 (452)
T 1fmk_A          200 VWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQ---EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK  270 (452)
T ss_dssp             EEEEEETT-TEEEEEEECCTTSS----CHHHHHH---HHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHS
T ss_pred             EEEEEECC-CceEEEEEeccCCC----CHHHHHH---HHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHH
Confidence            79998875 46799999986432    1234444   4777888999999999999866 67899999999999999985


Q ss_pred             h---cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          81 A---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        81 ~---~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      .   ..+++..+..++.|++.||+|||++|++||   |++|+||                      +++.++.+||+|||
T Consensus       271 ~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHr---Dlkp~Ni----------------------ll~~~~~~kl~DfG  325 (452)
T 1fmk_A          271 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR---DLRAANI----------------------LVGENLVCKVADFG  325 (452)
T ss_dssp             HHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE----------------------EECGGGCEEECCCC
T ss_pred             hcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC---CCChhhE----------------------EECCCCCEEECCCc
Confidence            3   458999999999999999999999999999   8889888                      77888999999999


Q ss_pred             CccCCCCCCC-CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-ccCCCC
Q psy3347         158 LCKEGMGFGD-RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VRYPRF  234 (245)
Q Consensus       158 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~p~~  234 (245)
                      +++....... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.+....+....+..+. .+.|..
T Consensus       326 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~  405 (452)
T 1fmk_A          326 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE  405 (452)
T ss_dssp             TTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTT
T ss_pred             cceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence            9975332211 1123345678999999988899999999999999999999 999999998888888876653 356788


Q ss_pred             CChhHHhhhc
Q psy3347         235 LSLEAIAIMR  244 (245)
Q Consensus       235 ~~~~~~~li~  244 (245)
                      +++++.+||+
T Consensus       406 ~~~~l~~li~  415 (452)
T 1fmk_A          406 CPESLHDLMC  415 (452)
T ss_dssp             SCHHHHHHHH
T ss_pred             CCHHHHHHHH
Confidence            9999999886


No 182
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=3.8e-36  Score=250.95  Aligned_cols=197  Identities=25%  Similarity=0.376  Sum_probs=162.0

Q ss_pred             CEeEEEe-cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEe-----eCCeEEEEEeeccCCc
Q psy3347           1 VILSQYR-NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ-----TEAHVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~-----~~~~~~lv~e~~~~~~   74 (245)
                      ||+|++. .+|+.||+|++...... ......+.+|.+++..+..++||||+++++++.     ..+..++||||+. ++
T Consensus        27 V~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~  104 (326)
T 1blx_A           27 VFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QD  104 (326)
T ss_dssp             EEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CB
T ss_pred             EEEEEecCCCCEEEEEEEeccCccc-ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCC-CC
Confidence            7999995 67899999999764321 112234456666666677779999999999987     4568999999997 59


Q ss_pred             hhhhhhh---cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCce
Q psy3347          75 LMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYV  151 (245)
Q Consensus        75 L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (245)
                      |.+++..   ..+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.+
T Consensus       105 L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~---dlkp~Ni----------------------li~~~~~~  159 (326)
T 1blx_A          105 LTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHR---DLKPQNI----------------------LVTSSGQI  159 (326)
T ss_dssp             HHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EECTTCCE
T ss_pred             HHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceec---cCCHHHe----------------------EEcCCCCE
Confidence            9888854   348999999999999999999999999999   9999998                      88889999


Q ss_pred             EEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         152 KIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       152 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      +|+|||++..... ........++..|+|||.+.+..++.++||||||+++|+|++|+.||.+.+..+....+.
T Consensus       160 kl~Dfg~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~  232 (326)
T 1blx_A          160 KLADFGLARIYSF-QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL  232 (326)
T ss_dssp             EECSCCSCCCCCG-GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             EEecCcccccccC-CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            9999999875322 222344578899999999998889999999999999999999999999888777766664


No 183
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=1.8e-36  Score=257.84  Aligned_cols=191  Identities=25%  Similarity=0.427  Sum_probs=156.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeE------EEEEeeccCCc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHV------CFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~------~lv~e~~~~~~   74 (245)
                      ||+|+++.+|+.||+|++..... .....+.+   .+++.+++.++||||+++++++...+..      ++||||+. ++
T Consensus        58 Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~---~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~  132 (371)
T 4exu_A           58 VCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRA---YRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TD  132 (371)
T ss_dssp             EEEEEETTTTEEEEEEEECSTTS-SHHHHHHH---HHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EE
T ss_pred             EEEEEECCCCCEEEEEEeccccc-chhHHHHH---HHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEcccc-cc
Confidence            79999999999999999986431 22222333   4457778889999999999999876644      99999997 47


Q ss_pred             hhhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          75 LMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        75 L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      |...+.. .+++..+..++.|++.||+|||++||+|+   |++|+||                      +++.++.+||+
T Consensus       133 l~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~---Dikp~NI----------------------ll~~~~~~kL~  186 (371)
T 4exu_A          133 LQKIMGM-EFSEEKIQYLVYQMLKGLKYIHSAGVVHR---DLKPGNL----------------------AVNEDCELKIL  186 (371)
T ss_dssp             HHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EECTTCCEEEC
T ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHCCCcCC---CcCHHHe----------------------EECCCCCEEEE
Confidence            8777643 49999999999999999999999999999   9999998                      88889999999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      |||+++...   .......||..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.
T Consensus       187 Dfg~a~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  255 (371)
T 4exu_A          187 DFGLARHAD---AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL  255 (371)
T ss_dssp             STTCC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             ecCcccccc---cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            999987532   22345578999999999977 678999999999999999999999999888777666654


No 184
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=1.3e-36  Score=260.71  Aligned_cols=188  Identities=23%  Similarity=0.422  Sum_probs=151.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC------eEEEEEeeccCCc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA------HVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~------~~~lv~e~~~~~~   74 (245)
                      ||+|++..+++ +|+|++.......          .+++++++.++||||++++++|...+      ..++||||++++.
T Consensus        56 V~~a~~~~~~~-~aikk~~~~~~~~----------~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l  124 (394)
T 4e7w_A           56 VFQAKLVESDE-VAIKKVLQDKRFK----------NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETV  124 (394)
T ss_dssp             EEEEEETTTEE-EEEEEEECCTTSC----------CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEH
T ss_pred             EEEEEECCCCe-EEEEEEecCcchH----------HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccH
Confidence            79999987776 8888886532111          23467788999999999999996543      4889999998754


Q ss_pred             hhhhhh----hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccC-CCC
Q psy3347          75 LMMHIH----ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVND-TEG  149 (245)
Q Consensus        75 L~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~-~~~  149 (245)
                      +.....    ...+++..++.++.|++.||+|||++||+||   |+||+||                      +++ .++
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr---Dlkp~Ni----------------------ll~~~~~  179 (394)
T 4e7w_A          125 YRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHR---DIKPQNL----------------------LLDPPSG  179 (394)
T ss_dssp             HHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EEETTTT
T ss_pred             HHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCC---CCCHHHE----------------------EEcCCCC
Confidence            443332    4578999999999999999999999999999   9999888                      776 789


Q ss_pred             ceEEeecCCccCCCCCCCCCCcccCCCCccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         150 YVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       150 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      .+||+|||+++..... .......+|..|+|||.+.+. .++.++|||||||++|+|++|+.||.+.+..+....+.
T Consensus       180 ~~kL~DFG~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~  255 (394)
T 4e7w_A          180 VLKLIDFGSAKILIAG-EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEII  255 (394)
T ss_dssp             EEEECCCTTCEECCTT-CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             cEEEeeCCCcccccCC-CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            9999999999753222 234456789999999999765 58999999999999999999999999988776666554


No 185
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=1.5e-36  Score=253.92  Aligned_cols=214  Identities=22%  Similarity=0.333  Sum_probs=170.3

Q ss_pred             CEeEE-----EecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCch
Q psy3347           1 VILSQ-----YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L   75 (245)
                      ||+|+     +..+++.||+|++....  .......+.   +++..++.++||||+++++++...+..++||||+++++|
T Consensus        46 Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~---~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  120 (327)
T 2yfx_A           46 VYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFL---MEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDL  120 (327)
T ss_dssp             EEEEEC--------CCEEEEEECCSSC--CHHHHHHHH---HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEH
T ss_pred             EEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHH---HHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcH
Confidence            68888     56688999999997432  222333444   446777888999999999999999999999999999999


Q ss_pred             hhhhhhc--------CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccC-
Q psy3347          76 MMHIHAD--------VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVND-  146 (245)
Q Consensus        76 ~~~~~~~--------~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~-  146 (245)
                      .+++...        .+++..+..++.|++.||.|||++|++|+   |++|+||                      +++ 
T Consensus       121 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~---dlkp~NI----------------------li~~  175 (327)
T 2yfx_A          121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR---DIAARNC----------------------LLTC  175 (327)
T ss_dssp             HHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EESC
T ss_pred             HHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecC---cCCHhHE----------------------EEec
Confidence            9998642        37888999999999999999999999999   8888888                      665 


Q ss_pred             --CCCceEEeecCCccCCCCC--CCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy3347         147 --TEGYVKIADFGLCKEGMGF--GDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVF  221 (245)
Q Consensus       147 --~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~  221 (245)
                        .+..++|+|||++......  ........++..|+|||.+.+..++.++||||||+++|+|++ |..||.+....+..
T Consensus       176 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~  255 (327)
T 2yfx_A          176 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL  255 (327)
T ss_dssp             SSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred             CCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHH
Confidence              3456999999988632111  112334567888999999988889999999999999999998 99999988888888


Q ss_pred             HHHhcCc-ccCCCCCChhHHhhhc
Q psy3347         222 DSIVNDE-VRYPRFLSLEAIAIMR  244 (245)
Q Consensus       222 ~~~~~~~-~~~p~~~~~~~~~li~  244 (245)
                      ..+..+. ...|..+++++.++|+
T Consensus       256 ~~~~~~~~~~~~~~~~~~l~~li~  279 (327)
T 2yfx_A          256 EFVTSGGRMDPPKNCPGPVYRIMT  279 (327)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             HHHhcCCCCCCCCCCCHHHHHHHH
Confidence            7776654 3467789999998885


No 186
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.8e-37  Score=266.21  Aligned_cols=197  Identities=28%  Similarity=0.480  Sum_probs=158.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC--eEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA--HVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~--~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|+++.+|+.||+|++.....  ....+.+.   +++++++.++||||+++++++...+  +.++||||+++++|.++
T Consensus        25 Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~---~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~   99 (396)
T 4eut_A           25 VFRGRHKKTGDLFAIKVFNNISF--LRPVDVQM---REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTV   99 (396)
T ss_dssp             EEEEEETTTCCEEEEEEECGGGG--GSCHHHHH---HHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHH
T ss_pred             EEEEEECCCCcEEEEEEeccccc--cchHHHHH---HHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHH
Confidence            79999999999999999985432  12233333   4577788899999999999998755  78999999999999999


Q ss_pred             hhhc----CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc----CCCCc
Q psy3347          79 IHAD----VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN----DTEGY  150 (245)
Q Consensus        79 ~~~~----~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  150 (245)
                      ++..    .+++..+..++.|++.||+|||++||+||   |+||+||                      ++    +.++.
T Consensus       100 l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~~~~  154 (396)
T 4eut_A          100 LEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR---NIKPGNI----------------------MRVIGEDGQSV  154 (396)
T ss_dssp             TTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EEEECTTSCEE
T ss_pred             HHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEEC---CcCHHHE----------------------EEeecCCCcee
Confidence            8542    38999999999999999999999999999   8888888                      55    66778


Q ss_pred             eEEeecCCccCCCCCCCCCCcccCCCCccccccccC--------CCCCcchhHHHHHHHHHHHHhCCCCCCC----CCHH
Q psy3347         151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE--------TSYTRAVDWWGLGVLIFEMLVGESPFPG----DDEE  218 (245)
Q Consensus       151 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslG~~l~el~~g~~pf~~----~~~~  218 (245)
                      +||+|||+++..... .......|+..|+|||.+.+        ..++.++|||||||++|+|++|+.||.+    ....
T Consensus       155 ~kL~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~  233 (396)
T 4eut_A          155 YKLTDFGAARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK  233 (396)
T ss_dssp             EEECCGGGCEECCCG-GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCH
T ss_pred             EEEecCCCceEccCC-CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchH
Confidence            999999999753322 22345678999999999864        4577899999999999999999999964    3344


Q ss_pred             HHHHHHhcCc
Q psy3347         219 EVFDSIVNDE  228 (245)
Q Consensus       219 ~~~~~~~~~~  228 (245)
                      +....+..+.
T Consensus       234 ~~~~~~~~~~  243 (396)
T 4eut_A          234 EVMYKIITGK  243 (396)
T ss_dssp             HHHHHHHHSC
T ss_pred             HHHHHHhcCC
Confidence            5555555443


No 187
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=8.6e-37  Score=255.78  Aligned_cols=214  Identities=27%  Similarity=0.460  Sum_probs=170.5

Q ss_pred             CEeEEEecCCc-----EEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCc
Q psy3347           1 VILSQYRNTGE-----YFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~   74 (245)
                      ||+|.+..+++     .||+|++....  .....+.+.+|   +..++.+ +||||+++++++..++..++||||+++++
T Consensus        62 Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E---~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~  136 (333)
T 2i1m_A           62 VVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSE---LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD  136 (333)
T ss_dssp             EEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHH---HHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEE
T ss_pred             eEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHH---HHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCc
Confidence            79999877664     79999997643  22333444444   6667777 89999999999999999999999999999


Q ss_pred             hhhhhhh---------------cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccc
Q psy3347          75 LMMHIHA---------------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQE  139 (245)
Q Consensus        75 L~~~~~~---------------~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~  139 (245)
                      |.+++..               ..+++..+..++.|++.||+|||++|++|+   |++|+||                  
T Consensus       137 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~---Dlkp~NI------------------  195 (333)
T 2i1m_A          137 LLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHR---DVAARNV------------------  195 (333)
T ss_dssp             HHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGC------------------
T ss_pred             HHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccC---CcccceE------------------
Confidence            9998853               247889999999999999999999999999   9999888                  


Q ss_pred             hhccccCCCCceEEeecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCC
Q psy3347         140 IKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDD  216 (245)
Q Consensus       140 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~  216 (245)
                          +++.++.++|+|||++........  ......++..|+|||.+.+..++.++||||||+++|+|++ |..||.+..
T Consensus       196 ----l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  271 (333)
T 2i1m_A          196 ----LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL  271 (333)
T ss_dssp             ----EEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             ----EECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc
Confidence                778889999999999875322221  1233456778999999988889999999999999999998 999998766


Q ss_pred             HHHHHHHHhcCc--ccCCCCCChhHHhhhc
Q psy3347         217 EEEVFDSIVNDE--VRYPRFLSLEAIAIMR  244 (245)
Q Consensus       217 ~~~~~~~~~~~~--~~~p~~~~~~~~~li~  244 (245)
                      .......+....  ...|..+++++.+||+
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  301 (333)
T 2i1m_A          272 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ  301 (333)
T ss_dssp             SSHHHHHHHHHTCCCCCCTTCCHHHHHHHH
T ss_pred             hhHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence            544444443332  3356778899888875


No 188
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=3e-36  Score=254.30  Aligned_cols=193  Identities=23%  Similarity=0.369  Sum_probs=157.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC-----CeEEEEEeeccCCch
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE-----AHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~-----~~~~lv~e~~~~~~L   75 (245)
                      ||+|++..+|+.||||++....  .......+   .++++.++.++||||+++++++...     +..+++||++. ++|
T Consensus        27 V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~---~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L  100 (353)
T 2b9h_A           27 VCSATHKPTGEIVAIKKIEPFD--KPLFALRT---LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDL  100 (353)
T ss_dssp             EEEEEETTTTEEEEEEEECCCS--SHHHHHHH---HHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEH
T ss_pred             EEEEEECCCCcEEEEEeecccc--cchHHHHH---HHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC-ccH
Confidence            7999999999999999997432  22222333   3457778888999999999998654     67999999997 589


Q ss_pred             hhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          76 MMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        76 ~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      ..++....+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|
T Consensus       101 ~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~---Dlkp~Ni----------------------l~~~~~~~kl~D  155 (353)
T 2b9h_A          101 HRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR---DLKPSNL----------------------LINSNCDLKVCD  155 (353)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCCGGGE----------------------EECTTCCEEECC
T ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecC---CCCHHHe----------------------EEcCCCcEEEEe
Confidence            998888889999999999999999999999999999   9999998                      888899999999


Q ss_pred             cCCccCCCCCCC----------CCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy3347         156 FGLCKEGMGFGD----------RTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI  224 (245)
Q Consensus       156 fg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~  224 (245)
                      ||++........          ......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+....+
T Consensus       156 fg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  235 (353)
T 2b9h_A          156 FGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI  235 (353)
T ss_dssp             CTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence            999875322111          1223467899999998865 67899999999999999999999999988766555443


No 189
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.9e-36  Score=253.64  Aligned_cols=213  Identities=23%  Similarity=0.362  Sum_probs=166.8

Q ss_pred             CEeEEEecCCcEE----EEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGEYF----AIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~~v----aiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|++..+|+.+    |+|.+....  .....+.+.+   ++..++.++||||+++++++..++ .++++|++.+++|.
T Consensus        31 Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~---E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~  104 (327)
T 3lzb_A           31 VYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILD---EAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLL  104 (327)
T ss_dssp             EEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHH---HHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHH
T ss_pred             EEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHH---HHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHH
Confidence            7999999888866    555554321  1222334444   477788999999999999997765 88999999999999


Q ss_pred             hhhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          77 MHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        77 ~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      +++..  ..+++..+..++.|++.||.|||++|++||   |+||+||                      +++.++.+||+
T Consensus       105 ~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~---Dikp~NI----------------------l~~~~~~~kL~  159 (327)
T 3lzb_A          105 DYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR---DLAARNV----------------------LVKTPQHVKIT  159 (327)
T ss_dssp             HHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EEEETTEEEEC
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCC---CCCHHHE----------------------EEcCCCCEEEc
Confidence            98854  468999999999999999999999999999   9999998                      77888999999


Q ss_pred             ecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-cc
Q psy3347         155 DFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VR  230 (245)
Q Consensus       155 Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~  230 (245)
                      |||++........  ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||.+.+..+....+.... .+
T Consensus       160 DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~  239 (327)
T 3lzb_A          160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP  239 (327)
T ss_dssp             CTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC
T ss_pred             cCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            9999875322211  1223345678999999999999999999999999999999 999999888877777776554 45


Q ss_pred             CCCCCChhHHhhhc
Q psy3347         231 YPRFLSLEAIAIMR  244 (245)
Q Consensus       231 ~p~~~~~~~~~li~  244 (245)
                      .|..+++++.++|+
T Consensus       240 ~~~~~~~~l~~li~  253 (327)
T 3lzb_A          240 QPPICTIDVYMIMR  253 (327)
T ss_dssp             CCTTBCHHHHHHHH
T ss_pred             CCccCCHHHHHHHH
Confidence            67789999998885


No 190
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=7.9e-36  Score=255.57  Aligned_cols=212  Identities=17%  Similarity=0.331  Sum_probs=164.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcC--CCceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMR--HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~--h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|.+.. |+.||||++..... .....+.+.+|   +++++.++  ||||+++++++..++..++||| +.+++|.++
T Consensus        72 Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E---i~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~  145 (390)
T 2zmd_A           72 VFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNE---IAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSW  145 (390)
T ss_dssp             EEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHH---HHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHH
T ss_pred             EEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHH---HHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHH
Confidence            79998875 99999999976432 23334445555   55666665  5999999999999999999999 567899998


Q ss_pred             hhh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          79 IHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        79 ~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      +.. ..+++..+..++.|++.||.|||++||+||   |+||+||                      +++ ++.+||+|||
T Consensus       146 l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHr---Dlkp~NI----------------------ll~-~~~~kl~DFG  199 (390)
T 2zmd_A          146 LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS---DLKPANF----------------------LIV-DGMLKLIDFG  199 (390)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCC---CCCGGGE----------------------EES-SSCEEECCCS
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec---CCCHHHE----------------------EEE-CCeEEEEecC
Confidence            854 568888999999999999999999999999   8888888                      554 4789999999


Q ss_pred             CccCCCCCCC--CCCcccCCCCccccccccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHH
Q psy3347         158 LCKEGMGFGD--RTGTFCGTPEFLAPEVLTE-----------TSYTRAVDWWGLGVLIFEMLVGESPFPGDD-EEEVFDS  223 (245)
Q Consensus       158 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslG~~l~el~~g~~pf~~~~-~~~~~~~  223 (245)
                      +++.......  .....+||+.|+|||.+.+           ..++.++|||||||++|+|++|+.||.+.. .......
T Consensus       200 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~  279 (390)
T 2zmd_A          200 IANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA  279 (390)
T ss_dssp             SSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH
T ss_pred             ccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHH
Confidence            9975432221  2345678999999999965           368889999999999999999999997653 3445555


Q ss_pred             HhcCc--ccCCCCCChhHHhhhc
Q psy3347         224 IVNDE--VRYPRFLSLEAIAIMR  244 (245)
Q Consensus       224 ~~~~~--~~~p~~~~~~~~~li~  244 (245)
                      +....  ..+|...++++.+||+
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~  302 (390)
T 2zmd_A          280 IIDPNHEIEFPDIPEKDLQDVLK  302 (390)
T ss_dssp             HHCTTSCCCCCCCSCHHHHHHHH
T ss_pred             HhCccccCCCCccchHHHHHHHH
Confidence            55443  3457777888988875


No 191
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=1.9e-36  Score=252.74  Aligned_cols=217  Identities=31%  Similarity=0.521  Sum_probs=162.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccch--hhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIAR--DEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|+++.+|+.||+|++........  ..........+++++++.++||||+++++++..++ .++||||+++++|.++
T Consensus        26 V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~  104 (322)
T 2ycf_A           26 VKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDK  104 (322)
T ss_dssp             EEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTEETHHH
T ss_pred             EEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHH
Confidence            79999999999999999976432110  11111122234577788899999999999987665 8999999999999888


Q ss_pred             hh-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCC---ceEEe
Q psy3347          79 IH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG---YVKIA  154 (245)
Q Consensus        79 ~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~kl~  154 (245)
                      +. ...+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++   .+||+
T Consensus       105 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~---dlkp~NI----------------------l~~~~~~~~~~kl~  159 (322)
T 2ycf_A          105 VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR---DLKPENV----------------------LLSSQEEDCLIKIT  159 (322)
T ss_dssp             HSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EESSSSSSCCEEEC
T ss_pred             HhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecc---CCCHHHE----------------------EEecCCCCCeEEEc
Confidence            74 4578999999999999999999999999999   8888888                      665544   49999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCcccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcCccc
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLT---ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE-EVFDSIVNDEVR  230 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~-~~~~~~~~~~~~  230 (245)
                      |||++..... ........|+..|+|||.+.   ...++.++|||||||++|+|++|..||.+.... .....+..+...
T Consensus       160 Dfg~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  238 (322)
T 2ycf_A          160 DFGHSKILGE-TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN  238 (322)
T ss_dssp             CCTTCEECCC-CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCC
T ss_pred             cCccceeccc-ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccc
Confidence            9999875322 11123456899999999974   456889999999999999999999999765332 333444444333


Q ss_pred             C----CCCCChhHHhhhc
Q psy3347         231 Y----PRFLSLEAIAIMR  244 (245)
Q Consensus       231 ~----p~~~~~~~~~li~  244 (245)
                      +    +..+++++.+||+
T Consensus       239 ~~~~~~~~~~~~~~~li~  256 (322)
T 2ycf_A          239 FIPEVWAEVSEKALDLVK  256 (322)
T ss_dssp             CCHHHHTTSCHHHHHHHH
T ss_pred             cCchhhhhcCHHHHHHHH
Confidence            2    2567888888875


No 192
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=5.6e-36  Score=244.80  Aligned_cols=210  Identities=24%  Similarity=0.389  Sum_probs=171.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++. +++.||+|++.....    ..+.+.+   +++.++.++||||+++++++. .+..+++|||+++++|.+++.
T Consensus        29 Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~---E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~   99 (279)
T 1qpc_A           29 VWMGYYN-GHTKVAVKSLKQGSM----SPDAFLA---EANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK   99 (279)
T ss_dssp             EEEEEET-TTEEEEEEEECTTSS----CHHHHHH---HHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTT
T ss_pred             EEEEEEc-CCcEEEEEEecCCcc----cHHHHHH---HHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHh
Confidence            7899865 577899999976432    1233444   467788889999999999986 456899999999999999985


Q ss_pred             hc---CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          81 AD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        81 ~~---~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      ..   .+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||
T Consensus       100 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~---dikp~Ni----------------------l~~~~~~~kl~Dfg  154 (279)
T 1qpc_A          100 TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR---DLRAANI----------------------LVSDTLSCKIADFG  154 (279)
T ss_dssp             SHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECTTSCEEECCCT
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecc---CCCHhhE----------------------EEcCCCCEEECCCc
Confidence            42   69999999999999999999999999999   9999998                      88889999999999


Q ss_pred             CccCCCCCCC-CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-ccCCCC
Q psy3347         158 LCKEGMGFGD-RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VRYPRF  234 (245)
Q Consensus       158 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~p~~  234 (245)
                      ++........ ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||.+.+..+....+..+. ...|..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  234 (279)
T 1qpc_A          155 LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN  234 (279)
T ss_dssp             TCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTT
T ss_pred             ccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCccc
Confidence            9875432211 1223345778999999988889999999999999999999 999999988888877776653 345778


Q ss_pred             CChhHHhhhc
Q psy3347         235 LSLEAIAIMR  244 (245)
Q Consensus       235 ~~~~~~~li~  244 (245)
                      +++++.++|+
T Consensus       235 ~~~~l~~li~  244 (279)
T 1qpc_A          235 CPEELYQLMR  244 (279)
T ss_dssp             CCHHHHHHHH
T ss_pred             ccHHHHHHHH
Confidence            8999998875


No 193
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=8.4e-36  Score=251.14  Aligned_cols=212  Identities=17%  Similarity=0.339  Sum_probs=161.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCC--CceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRH--PFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h--~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|.+. +++.||+|++..... .....+.+.+|   ++.++.++|  |||+++++++..++..++||| +.+++|.++
T Consensus        25 Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E---~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~   98 (343)
T 3dbq_A           25 VFQVLNE-KKQIYAIKYVNLEEA-DNQTLDSYRNE---IAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSW   98 (343)
T ss_dssp             EEEEECT-TSCEEEEEEEECTTC-CHHHHHHHHHH---HHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHH
T ss_pred             EEEEEeC-CCCEEEEEEeecccc-chHHHHHHHHH---HHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCCCHHHH
Confidence            7999884 689999999986432 22333444444   666666765  999999999999999999999 567799998


Q ss_pred             hhh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          79 IHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        79 ~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      +.. ..+++..+..++.|++.||.|||++||+||   |+||+||                      +++ ++.+||+|||
T Consensus        99 l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHr---Dikp~NI----------------------ll~-~~~~kl~DFG  152 (343)
T 3dbq_A           99 LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS---DLKPANF----------------------LIV-DGMLKLIDFG  152 (343)
T ss_dssp             HHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EEE-TTEEEECCCS
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecC---CCCcceE----------------------EEE-CCcEEEeecc
Confidence            854 578999999999999999999999999999   8888888                      554 5789999999


Q ss_pred             CccCCCCCCC--CCCcccCCCCccccccccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHH
Q psy3347         158 LCKEGMGFGD--RTGTFCGTPEFLAPEVLTE-----------TSYTRAVDWWGLGVLIFEMLVGESPFPGDD-EEEVFDS  223 (245)
Q Consensus       158 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslG~~l~el~~g~~pf~~~~-~~~~~~~  223 (245)
                      +++.......  .....+||+.|+|||.+.+           ..++.++|||||||++|+|++|+.||.+.. .......
T Consensus       153 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~  232 (343)
T 3dbq_A          153 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA  232 (343)
T ss_dssp             SSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH
T ss_pred             cccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHH
Confidence            9975432221  2335578999999999964           568889999999999999999999997643 3344444


Q ss_pred             HhcC--cccCCCCCChhHHhhhc
Q psy3347         224 IVND--EVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       224 ~~~~--~~~~p~~~~~~~~~li~  244 (245)
                      +...  ...+|...++++.+||+
T Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~  255 (343)
T 3dbq_A          233 IIDPNHEIEFPDIPEKDLQDVLK  255 (343)
T ss_dssp             HHCTTSCCCCCCCSCHHHHHHHH
T ss_pred             HhcCCcccCCcccCCHHHHHHHH
Confidence            4433  33567888888888875


No 194
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=3.6e-36  Score=247.13  Aligned_cols=215  Identities=24%  Similarity=0.384  Sum_probs=167.6

Q ss_pred             CEeEEEec-CCc--EEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRN-TGE--YFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~-~~~--~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|++.. +++  .||+|+++..........+.+.+|   ++.++.++||||+++++++..++ .+++||++++++|.+
T Consensus        34 Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e---~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~  109 (291)
T 1u46_A           34 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE---VNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLD  109 (291)
T ss_dssp             CEEEEEECTTSCEEEEEEEC--------CHHHHHHHHH---HHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHH
T ss_pred             EEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHH---HHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCHHH
Confidence            79998754 333  699999986543333344444444   67778889999999999997765 889999999999999


Q ss_pred             hhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          78 HIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        78 ~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      ++..  ..+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.++|+|
T Consensus       110 ~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~---dikp~Ni----------------------li~~~~~~kl~D  164 (291)
T 1u46_A          110 RLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR---DLAARNL----------------------LLATRDLVKIGD  164 (291)
T ss_dssp             HHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECS---CCCGGGE----------------------EEEETTEEEECC
T ss_pred             HHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccC---CCchheE----------------------EEcCCCCEEEcc
Confidence            8853  468999999999999999999999999999   8999888                      778889999999


Q ss_pred             cCCccCCCCCCC---CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCcc--
Q psy3347         156 FGLCKEGMGFGD---RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEV--  229 (245)
Q Consensus       156 fg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~~--  229 (245)
                      ||++........   ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||.+.+..+....+.....  
T Consensus       165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~  244 (291)
T 1u46_A          165 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL  244 (291)
T ss_dssp             CTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCC
T ss_pred             ccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCC
Confidence            999875432221   1223456778999999988888999999999999999999 9999999888888887766543  


Q ss_pred             cCCCCCChhHHhhhc
Q psy3347         230 RYPRFLSLEAIAIMR  244 (245)
Q Consensus       230 ~~p~~~~~~~~~li~  244 (245)
                      +.+..+++++.++|+
T Consensus       245 ~~~~~~~~~l~~li~  259 (291)
T 1u46_A          245 PRPEDCPQDIYNVMV  259 (291)
T ss_dssp             CCCTTCCHHHHHHHH
T ss_pred             CCCcCcCHHHHHHHH
Confidence            345788999998875


No 195
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=3e-36  Score=248.96  Aligned_cols=215  Identities=22%  Similarity=0.339  Sum_probs=166.6

Q ss_pred             CEeEE----EecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC--CeEEEEEeeccCCc
Q psy3347           1 VILSQ----YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE--AHVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~--~~~~lv~e~~~~~~   74 (245)
                      ||+|+    +..+|+.||+|++....  .....+.+.   ++++.++.++||||+++++++...  +..++||||+++++
T Consensus        37 V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~---~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~  111 (302)
T 4e5w_A           37 VELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLK---KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS  111 (302)
T ss_dssp             EEEEEECTTSSSCSEEEEEEEEC-------CCHHHHH---HHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCB
T ss_pred             EEEEEEccccCccCeEEEEEEecccc--cchhHHHHH---HHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCc
Confidence            68888    67789999999998543  222234444   447778889999999999999876  67899999999999


Q ss_pred             hhhhhh--hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceE
Q psy3347          75 LMMHIH--ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVK  152 (245)
Q Consensus        75 L~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  152 (245)
                      |.+++.  ...+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++
T Consensus       112 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~---dikp~Ni----------------------l~~~~~~~k  166 (302)
T 4e5w_A          112 LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHR---DLAARNV----------------------LVESEHQVK  166 (302)
T ss_dssp             HHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EEEETTEEE
T ss_pred             HHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccC---CCchheE----------------------EEcCCCCEE
Confidence            999984  3468999999999999999999999999999   9999998                      788889999


Q ss_pred             EeecCCccCCCCCCC---CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC--------------
Q psy3347         153 IADFGLCKEGMGFGD---RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD--------------  215 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~--------------  215 (245)
                      |+|||++........   ......++..|+|||.+.+..++.++||||||+++|+|++|..|+...              
T Consensus       167 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  246 (302)
T 4e5w_A          167 IGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQ  246 (302)
T ss_dssp             ECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGG
T ss_pred             ECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccc
Confidence            999999875433221   233456777899999998888999999999999999999998875321              


Q ss_pred             CH-HHHHHHHhcC-cccCCCCCChhHHhhhcC
Q psy3347         216 DE-EEVFDSIVND-EVRYPRFLSLEAIAIMRR  245 (245)
Q Consensus       216 ~~-~~~~~~~~~~-~~~~p~~~~~~~~~li~~  245 (245)
                      .. ......+..+ ..+.|..+++++.+||++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  278 (302)
T 4e5w_A          247 MTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRK  278 (302)
T ss_dssp             GHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             cCHHHHHHHHhccCCCCCCCCCCHHHHHHHHH
Confidence            11 2222223222 334578899999998863


No 196
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=4.3e-36  Score=247.29  Aligned_cols=210  Identities=19%  Similarity=0.228  Sum_probs=162.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEE-eeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF-QTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|++..+|+.||+|++......     +.+.+|   +..++.++|++++..++.+ ..++..++||||+ +++|.+++
T Consensus        25 V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e---~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~   95 (296)
T 3uzp_A           25 IYLGTDIAAGEEVAIKLECVKTKH-----PQLHIE---SKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLF   95 (296)
T ss_dssp             EEEEEETTTTEEEEEEEEESCSSC-----CHHHHH---HHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHH
T ss_pred             EEEEEEcCCCcEEEEEEecCCcch-----hHHHHH---HHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHH
Confidence            799999999999999998764321     234444   5556677787766666655 6677899999999 88999988


Q ss_pred             h--hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc---CCCCceEEe
Q psy3347          80 H--ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN---DTEGYVKIA  154 (245)
Q Consensus        80 ~--~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~kl~  154 (245)
                      .  ...+++..+..++.|++.||+|||++|++|+   |++|+||                      ++   +.++.+||+
T Consensus        96 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~---dlkp~NI----------------------l~~~~~~~~~~kl~  150 (296)
T 3uzp_A           96 NFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHR---DVKPDNF----------------------LMGLGKKGNLVYII  150 (296)
T ss_dssp             HHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCCGGGE----------------------EECCGGGTTCEEEC
T ss_pred             HhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeC---CCCHHHe----------------------EEecCCCCCeEEEe
Confidence            6  4579999999999999999999999999999   8888888                      55   467899999


Q ss_pred             ecCCccCCCCCCC-------CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHH
Q psy3347         155 DFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD---EEEVFDSI  224 (245)
Q Consensus       155 Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~---~~~~~~~~  224 (245)
                      |||++........       ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.+..   ..+....+
T Consensus       151 Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  230 (296)
T 3uzp_A          151 DFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI  230 (296)
T ss_dssp             CCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHH
T ss_pred             eCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhh
Confidence            9999875332221       1245578999999999999889999999999999999999999997632   22333333


Q ss_pred             hcCcccC-----CCCCChhHHhhhc
Q psy3347         225 VNDEVRY-----PRFLSLEAIAIMR  244 (245)
Q Consensus       225 ~~~~~~~-----p~~~~~~~~~li~  244 (245)
                      .......     +..+++++.++|+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~l~~li~  255 (296)
T 3uzp_A          231 SEKKMSTPIEVLCKGYPSEFATYLN  255 (296)
T ss_dssp             HHHHHHSCHHHHTTTSCHHHHHHHH
T ss_pred             cccccCCchHHHHhhCCHHHHHHHH
Confidence            3322222     3678888888875


No 197
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=5.2e-36  Score=245.36  Aligned_cols=213  Identities=23%  Similarity=0.344  Sum_probs=168.6

Q ss_pred             CEeEEEec---CCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRN---TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|++..   ++..||+|++....  .....+.+.+|   +..++.++||||+++++++..+ ..+++|||+++++|.+
T Consensus        28 Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E---~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~  101 (281)
T 3cc6_A           28 VYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSE---AVIMKNLDHPHIVKLIGIIEEE-PTWIIMELYPYGELGH  101 (281)
T ss_dssp             EEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHH---HHHHHHHCCTTBCCEEEEECSS-SCEEEEECCTTCBHHH
T ss_pred             EEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHH---HHHHHhCCCCCcceEEEEEcCC-CCEEEEecCCCCCHHH
Confidence            78998764   34569999998642  22333444444   6667778899999999998654 5689999999999999


Q ss_pred             hhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          78 HIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        78 ~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      ++..  ..+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.++|+|
T Consensus       102 ~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~---dlkp~Ni----------------------l~~~~~~~kl~D  156 (281)
T 3cc6_A          102 YLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR---DIAVRNI----------------------LVASPECVKLGD  156 (281)
T ss_dssp             HHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCSGGGE----------------------EEEETTEEEECC
T ss_pred             HHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccC---CCccceE----------------------EECCCCcEEeCc
Confidence            9854  358999999999999999999999999999   8999888                      778889999999


Q ss_pred             cCCccCCCCCCC-CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-cccCC
Q psy3347         156 FGLCKEGMGFGD-RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND-EVRYP  232 (245)
Q Consensus       156 fg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~-~~~~p  232 (245)
                      ||++........ ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||......+....+... ..+.|
T Consensus       157 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~  236 (281)
T 3cc6_A          157 FGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKP  236 (281)
T ss_dssp             CCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCC
T ss_pred             cCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCC
Confidence            999875332221 1233455778999999988889999999999999999998 99999877777666666554 34567


Q ss_pred             CCCChhHHhhhc
Q psy3347         233 RFLSLEAIAIMR  244 (245)
Q Consensus       233 ~~~~~~~~~li~  244 (245)
                      ..+++++.++|+
T Consensus       237 ~~~~~~l~~li~  248 (281)
T 3cc6_A          237 DLCPPVLYTLMT  248 (281)
T ss_dssp             TTCCHHHHHHHH
T ss_pred             CCCCHHHHHHHH
Confidence            889999998876


No 198
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=1.2e-36  Score=251.27  Aligned_cols=214  Identities=24%  Similarity=0.395  Sum_probs=158.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|++.....  ....+.+   .++++.++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        31 V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~---~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  105 (303)
T 2vwi_A           31 VQAAYCAPKKEKVAIKRINLEKC--QTSMDEL---LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIK  105 (303)
T ss_dssp             EEEEEC----CEEEEECCC---------------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHH
T ss_pred             EEEEEECCCCcEEEEEEEEhhhc--chhHHHH---HHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHH
Confidence            79999999999999999875421  1222333   345777889999999999999999999999999999999998885


Q ss_pred             h---------cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCce
Q psy3347          81 A---------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYV  151 (245)
Q Consensus        81 ~---------~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (245)
                      .         ..+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.+
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~---dl~p~Ni----------------------l~~~~~~~  160 (303)
T 2vwi_A          106 HIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHR---DVKAGNI----------------------LLGEDGSV  160 (303)
T ss_dssp             HHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCSGGGE----------------------EECTTCCE
T ss_pred             HHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCC---CCChhhE----------------------EEcCCCCE
Confidence            2         358999999999999999999999999999   9999998                      88889999


Q ss_pred             EEeecCCccCCCCCC-----CCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         152 KIADFGLCKEGMGFG-----DRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       152 kl~Dfg~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      +|+|||++.......     .......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||.+....+......
T Consensus       161 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  240 (303)
T 2vwi_A          161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL  240 (303)
T ss_dssp             EECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH
T ss_pred             EEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHh
Confidence            999999886432211     11234568899999999976 568899999999999999999999998877665555444


Q ss_pred             cCccc----------CCCCCChhHHhhhc
Q psy3347         226 NDEVR----------YPRFLSLEAIAIMR  244 (245)
Q Consensus       226 ~~~~~----------~p~~~~~~~~~li~  244 (245)
                      ....+          .+..+++++++||+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~  269 (303)
T 2vwi_A          241 QNDPPSLETGVQDKEMLKKYGKSFRKMIS  269 (303)
T ss_dssp             TSSCCCTTC-----CCCCCCCHHHHHHHH
T ss_pred             ccCCCccccccccchhhhhhhHHHHHHHH
Confidence            33221          12456788888875


No 199
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=6.4e-36  Score=252.66  Aligned_cols=191  Identities=25%  Similarity=0.424  Sum_probs=154.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCe------EEEEEeeccCCc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH------VCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~------~~lv~e~~~~~~   74 (245)
                      ||+|+++.+|+.||||++..... .....+.+   .+++..++.++||||+++++++...+.      .+++|||+. ++
T Consensus        40 V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~---~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~  114 (353)
T 3coi_A           40 VCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRA---YRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TD  114 (353)
T ss_dssp             EEEEEETTTTEEEEEEEESSTTS-SHHHHHHH---HHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EE
T ss_pred             EEEEEECCCCCEEEEEEeccccc-chHHHHHH---HHHHHHHHhcCCCCcccHhheEecccccccceeEEEEecccc-CC
Confidence            79999999999999999976431 22222333   345777888999999999999977653      599999997 58


Q ss_pred             hhhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          75 LMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        75 L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      |..++.. .+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.+||+
T Consensus       115 l~~~~~~-~~~~~~~~~i~~qi~~al~~LH~~~ivH~---dlkp~NI----------------------l~~~~~~~kl~  168 (353)
T 3coi_A          115 LQKIMGL-KFSEEKIQYLVYQMLKGLKYIHSAGVVHR---DLKPGNL----------------------AVNEDCELKIL  168 (353)
T ss_dssp             GGGTTTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCS---SCCGGGE----------------------EECTTCCEEEC
T ss_pred             HHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccC---CCCHHHE----------------------eECCCCcEEEe
Confidence            8877754 49999999999999999999999999999   9999998                      88889999999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      |||++....   .......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.+.+..+....+.
T Consensus       169 Dfg~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~  237 (353)
T 3coi_A          169 DFGLARHAD---AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL  237 (353)
T ss_dssp             STTCTTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHH
T ss_pred             ecccccCCC---CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            999987532   12334578899999999977 678899999999999999999999999887766655543


No 200
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=2.4e-36  Score=251.89  Aligned_cols=213  Identities=23%  Similarity=0.347  Sum_probs=166.2

Q ss_pred             EeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC--CeEEEEEeeccCCchhhhh
Q psy3347           2 ILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE--AHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         2 ~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~   79 (245)
                      |++.+..+|+.||+|+++...  .....+.+.+   ++++++.++||||+++++++...  ...++||||+++++|.+++
T Consensus        52 ~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~---E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l  126 (318)
T 3lxp_A           52 YDPTNDGTGEMVAVKALKADA--GPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL  126 (318)
T ss_dssp             ECSCC--CCEEEEEEEECTTC--CHHHHHHHHH---HHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHG
T ss_pred             EccCCCCCCcEEEEEEecccc--ChHHHHHHHH---HHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHH
Confidence            334556689999999998642  2233344444   47778888999999999999874  6899999999999999999


Q ss_pred             hhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCc
Q psy3347          80 HADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLC  159 (245)
Q Consensus        80 ~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~  159 (245)
                      ....+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||++
T Consensus       127 ~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~---Dikp~Ni----------------------l~~~~~~~kl~Dfg~a  181 (318)
T 3lxp_A          127 PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHR---DLAARNV----------------------LLDNDRLVKIGDFGLA  181 (318)
T ss_dssp             GGSCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECTTCCEEECCGGGC
T ss_pred             hhCCCCHHHHHHHHHHHHHHHHHHHhCCccCC---CCchheE----------------------EEcCCCCEEECCcccc
Confidence            88889999999999999999999999999999   9999998                      8888999999999998


Q ss_pred             cCCCCCCC---CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH---------------HHH
Q psy3347         160 KEGMGFGD---RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEE---------------EVF  221 (245)
Q Consensus       160 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~---------------~~~  221 (245)
                      ........   ......++..|+|||.+.+..++.++||||||+++|+|++|..||......               ...
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  261 (318)
T 3lxp_A          182 KAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT  261 (318)
T ss_dssp             EECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHH
T ss_pred             ccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHH
Confidence            75432221   123445677899999998888999999999999999999999998643211               112


Q ss_pred             HHHhcC-cccCCCCCChhHHhhhc
Q psy3347         222 DSIVND-EVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       222 ~~~~~~-~~~~p~~~~~~~~~li~  244 (245)
                      ..+... ..+.|..+++++.+||+
T Consensus       262 ~~~~~~~~~~~~~~~~~~l~~li~  285 (318)
T 3lxp_A          262 ELLERGERLPRPDKCPAEVYHLMK  285 (318)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             HHHhcccCCCCCccccHHHHHHHH
Confidence            222222 33457889999999886


No 201
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=5.7e-36  Score=246.98  Aligned_cols=214  Identities=21%  Similarity=0.327  Sum_probs=169.2

Q ss_pred             CEeEEEecC---CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEE-eeCCeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNT---GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF-QTEAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~-~~~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|.+..+   +..+|+|.+....  .....+.+.+   +++.++.++||||+++++++ ..++..+++|||+++++|.
T Consensus        41 Vy~~~~~~~~~~~~~~avk~~~~~~--~~~~~~~~~~---E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~  115 (298)
T 3f66_A           41 VYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLT---EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR  115 (298)
T ss_dssp             EEEEEEC-----CEEEEEEEETTCC--SHHHHHHHHH---HHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHH
T ss_pred             EEEEEEecCCCceeEEEEEecccCC--CHHHHHHHHH---HHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHH
Confidence            789987643   3368999887532  2333344444   46778899999999999985 4566889999999999999


Q ss_pred             hhhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          77 MHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        77 ~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      ++++.  ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+
T Consensus       116 ~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~---dikp~Ni----------------------l~~~~~~~kl~  170 (298)
T 3f66_A          116 NFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR---DLAARNC----------------------MLDEKFTVKVA  170 (298)
T ss_dssp             HHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE----------------------EECTTCCEEEC
T ss_pred             HHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCC---CCchheE----------------------EECCCCCEEEC
Confidence            99854  458899999999999999999999999999   9999998                      88889999999


Q ss_pred             ecCCccCCCCCCC----CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCcc
Q psy3347         155 DFGLCKEGMGFGD----RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEV  229 (245)
Q Consensus       155 Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~~  229 (245)
                      |||++........    ......++..|+|||.+.+..++.++||||||+++|+|++ |.+||.+....+....+..+..
T Consensus       171 Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~  250 (298)
T 3f66_A          171 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR  250 (298)
T ss_dssp             SCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCC
T ss_pred             cccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCC
Confidence            9999875322211    1223456778999999988889999999999999999999 7788887777777777666544


Q ss_pred             -cCCCCCChhHHhhhc
Q psy3347         230 -RYPRFLSLEAIAIMR  244 (245)
Q Consensus       230 -~~p~~~~~~~~~li~  244 (245)
                       ..|..+++++.++|+
T Consensus       251 ~~~~~~~~~~l~~li~  266 (298)
T 3f66_A          251 LLQPEYCPDPLYEVML  266 (298)
T ss_dssp             CCCCTTCCHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHH
Confidence             457788999988875


No 202
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=2.6e-36  Score=246.81  Aligned_cols=206  Identities=25%  Similarity=0.451  Sum_probs=164.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC-CeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE-AHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~-~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|++.  |+.||+|+++...     ..+.+.+   +++.++.++||||+++++++... +..++||||+++++|.+++
T Consensus        37 V~~~~~~--~~~vavK~~~~~~-----~~~~~~~---E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l  106 (278)
T 1byg_A           37 VMLGDYR--GNKVAVKCIKNDA-----TAQAFLA---EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL  106 (278)
T ss_dssp             EEEEEET--TEEEEEEECCCCC-------HHHHH---THHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHH
T ss_pred             EEEEEEc--CCEEEEEEecchh-----HHHHHHH---HHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHH
Confidence            6888774  8999999997542     2234444   47778899999999999987544 5789999999999999988


Q ss_pred             hhc---CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeec
Q psy3347          80 HAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADF  156 (245)
Q Consensus        80 ~~~---~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df  156 (245)
                      ...   .+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+||
T Consensus       107 ~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~---dlkp~Ni----------------------l~~~~~~~~l~Df  161 (278)
T 1byg_A          107 RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR---DLAARNV----------------------LVSEDNVAKVSDF  161 (278)
T ss_dssp             HHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE----------------------EECTTSCEEECCC
T ss_pred             HhcccccCCHHHHHHHHHHHHHHHHHHHhCCcccc---CCCcceE----------------------EEeCCCcEEEeec
Confidence            542   38899999999999999999999999999   9999998                      8888899999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-cccCCCC
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVND-EVRYPRF  234 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~-~~~~p~~  234 (245)
                      |++......   .....++..|+|||.+.+..++.++||||||+++|+|++ |+.||...+..+....+..+ ....|..
T Consensus       162 g~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  238 (278)
T 1byg_A          162 GLTKEASST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG  238 (278)
T ss_dssp             CC---------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTT
T ss_pred             ccccccccc---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCccc
Confidence            998743221   223356788999999988889999999999999999998 99999988877777777655 3456788


Q ss_pred             CChhHHhhhc
Q psy3347         235 LSLEAIAIMR  244 (245)
Q Consensus       235 ~~~~~~~li~  244 (245)
                      +++++.++|+
T Consensus       239 ~~~~l~~li~  248 (278)
T 1byg_A          239 CPPAVYEVMK  248 (278)
T ss_dssp             CCHHHHHHHH
T ss_pred             CCHHHHHHHH
Confidence            9999998886


No 203
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.9e-36  Score=257.92  Aligned_cols=214  Identities=21%  Similarity=0.315  Sum_probs=163.7

Q ss_pred             CEeEEEecC---CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEe-eCCeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNT---GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ-TEAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~-~~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|++..+   +..||+|.++...  .....+.+.+   ++.+++.++||||+++++++. .++..++||||+++++|.
T Consensus       105 Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~---E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~  179 (373)
T 3c1x_A          105 VYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLT---EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR  179 (373)
T ss_dssp             EEEEEEEETTTEEEEEEEEECCSCS--CSHHHHHHHH---HHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHH
T ss_pred             EEEEEEECCCCcEEEEEEEEcCCCC--CHHHHHHHHH---HHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHH
Confidence            799987654   3468999987532  2233444444   467788999999999999864 456889999999999999


Q ss_pred             hhhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          77 MHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        77 ~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      ++++.  ..+++..+..++.|++.||+|||++|++||   |+||+||                      +++.++.+||+
T Consensus       180 ~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr---Dlkp~NI----------------------ll~~~~~~kL~  234 (373)
T 3c1x_A          180 NFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR---DLAARNC----------------------MLDEKFTVKVA  234 (373)
T ss_dssp             HHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EECTTCCEEEC
T ss_pred             HHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecC---ccchheE----------------------EECCCCCEEEe
Confidence            99964  357888999999999999999999999999   9999998                      88889999999


Q ss_pred             ecCCccCCCCCCC----CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCcc
Q psy3347         155 DFGLCKEGMGFGD----RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDEV  229 (245)
Q Consensus       155 Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~~  229 (245)
                      |||+++.......    ......++..|+|||.+.+..++.++||||||+++|+|++ |.+||.+.+..+....+..+..
T Consensus       235 DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~  314 (373)
T 3c1x_A          235 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR  314 (373)
T ss_dssp             CC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCC
T ss_pred             eccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCC
Confidence            9999874322111    1223346678999999998899999999999999999999 7889987776666666665543


Q ss_pred             -cCCCCCChhHHhhhc
Q psy3347         230 -RYPRFLSLEAIAIMR  244 (245)
Q Consensus       230 -~~p~~~~~~~~~li~  244 (245)
                       ..|..+++++.++|+
T Consensus       315 ~~~p~~~~~~l~~li~  330 (373)
T 3c1x_A          315 LLQPEYCPDPLYEVML  330 (373)
T ss_dssp             CCCCTTCCHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHH
Confidence             457889999998885


No 204
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=1.9e-36  Score=251.55  Aligned_cols=214  Identities=27%  Similarity=0.459  Sum_probs=168.5

Q ss_pred             CEeEEE-----ecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCC-eEEEEEeeccCC
Q psy3347           1 VILSQY-----RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEA-HVCFVMEYAAGG   73 (245)
Q Consensus         1 V~~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~-~~~lv~e~~~~~   73 (245)
                      ||+|++     ..+++.||+|++....  .....+.+.+|   +..++.+ +||||+++++++...+ ..+++|||++++
T Consensus        43 Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E---~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~  117 (316)
T 2xir_A           43 VIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSE---LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG  117 (316)
T ss_dssp             EEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHH---HHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTE
T ss_pred             EEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHH---HHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCC
Confidence            688985     3578999999998642  22333444444   5566666 6999999999987654 599999999999


Q ss_pred             chhhhhhhcC-----------------CChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCc
Q psy3347          74 DLMMHIHADV-----------------FSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNS  136 (245)
Q Consensus        74 ~L~~~~~~~~-----------------l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~  136 (245)
                      +|.+++....                 +++..+..++.|++.||.|||++|++|+   |++|+||               
T Consensus       118 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~---dikp~Ni---------------  179 (316)
T 2xir_A          118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR---DLAARNI---------------  179 (316)
T ss_dssp             EHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE---------------
T ss_pred             cHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccc---cCccceE---------------
Confidence            9999986432                 7888999999999999999999999999   8999888               


Q ss_pred             ccchhccccCCCCceEEeecCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q psy3347         137 SQEIKLTVNDTEGYVKIADFGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFP  213 (245)
Q Consensus       137 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~  213 (245)
                             +++.++.+||+|||++........  ......++..|+|||.+.+..++.++||||||+++|+|++ |..||.
T Consensus       180 -------l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~  252 (316)
T 2xir_A          180 -------LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP  252 (316)
T ss_dssp             -------EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             -------EECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence                   778889999999999875433222  1234456788999999988889999999999999999998 999998


Q ss_pred             CCCHH-HHHHHHhcC-cccCCCCCChhHHhhhc
Q psy3347         214 GDDEE-EVFDSIVND-EVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       214 ~~~~~-~~~~~~~~~-~~~~p~~~~~~~~~li~  244 (245)
                      +.... .....+..+ ....|..+++++.++|.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  285 (316)
T 2xir_A          253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML  285 (316)
T ss_dssp             TCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHH
T ss_pred             ccchhHHHHHHhccCccCCCCCCCCHHHHHHHH
Confidence            76543 333444433 34567888999988875


No 205
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=4e-36  Score=251.31  Aligned_cols=213  Identities=23%  Similarity=0.370  Sum_probs=168.9

Q ss_pred             CEeEE----EecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEe--eCCeEEEEEeeccCCc
Q psy3347           1 VILSQ----YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ--TEAHVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~--~~~~~~lv~e~~~~~~   74 (245)
                      ||+|+    +..+|+.||+|++....   ....+.+.   +++++++.++||||+++++++.  ..+..++||||+++++
T Consensus        39 V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~  112 (327)
T 3lxl_A           39 VELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQ---REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC  112 (327)
T ss_dssp             EEEEEECTTSSSCSEEEEEEEESSCC---HHHHHHHH---HHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCB
T ss_pred             EEEEEeccCCCCcceEEEEEEeccCC---HHHHHHHH---HHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCC
Confidence            78898    56789999999997642   22333444   4477788899999999999986  4567999999999999


Q ss_pred             hhhhhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceE
Q psy3347          75 LMMHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVK  152 (245)
Q Consensus        75 L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  152 (245)
                      |.+++..  ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++
T Consensus       113 L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~---Dikp~NI----------------------l~~~~~~~k  167 (327)
T 3lxl_A          113 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR---DLAARNI----------------------LVESEAHVK  167 (327)
T ss_dssp             HHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EEEETTEEE
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCC---CCChhhE----------------------EECCCCCEE
Confidence            9999854  468999999999999999999999999999   9999998                      788889999


Q ss_pred             EeecCCccCCCCCCC---CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH------------
Q psy3347         153 IADFGLCKEGMGFGD---RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE------------  217 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~------------  217 (245)
                      |+|||++........   ......++..|+|||.+.+..++.++||||||+++|+|++|..||.....            
T Consensus       168 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~  247 (327)
T 3lxl_A          168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDV  247 (327)
T ss_dssp             ECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----C
T ss_pred             EcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhccccccc
Confidence            999999875322221   22344577789999999888899999999999999999999999854322            


Q ss_pred             ---HHHHHHHhcC-cccCCCCCChhHHhhhc
Q psy3347         218 ---EEVFDSIVND-EVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       218 ---~~~~~~~~~~-~~~~p~~~~~~~~~li~  244 (245)
                         ......+..+ ..+.|..+++++.+||+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (327)
T 3lxl_A          248 PALSRLLELLEEGQRLPAPPACPAEVHELMK  278 (327)
T ss_dssp             CHHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             ccHHHHHHHhhcccCCCCCCcccHHHHHHHH
Confidence               1222223222 33457789999998886


No 206
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=4e-36  Score=247.33  Aligned_cols=210  Identities=19%  Similarity=0.226  Sum_probs=160.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEE-eeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACF-QTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|++..+|+.||+|++......     +.+.+|   .+.++.++|++++..++.+ ...+..+++|||+ +++|.+++
T Consensus        25 V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e---~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~   95 (296)
T 4hgt_A           25 IYLGTDIAAGEEVAIKLECVKTKH-----PQLHIE---SKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLF   95 (296)
T ss_dssp             EEEEEETTTTEEEEEEEEEC---C-----CCHHHH---HHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHH
T ss_pred             EEEEEEcCCCceEEEEeecccccc-----hHHHHH---HHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHH
Confidence            799999999999999987654211     233344   4556666777766666655 6778899999999 88999988


Q ss_pred             h--hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc---CCCCceEEe
Q psy3347          80 H--ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN---DTEGYVKIA  154 (245)
Q Consensus        80 ~--~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~kl~  154 (245)
                      .  ...+++..+..++.|++.||+|||++|++|+   |+||+||                      ++   +.++.+||+
T Consensus        96 ~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~---Dlkp~NI----------------------l~~~~~~~~~~kL~  150 (296)
T 4hgt_A           96 NFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHR---DVKPDNF----------------------LMGLGKKGNLVYII  150 (296)
T ss_dssp             HHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EECCGGGTTCEEEC
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC---CCCHHHe----------------------eeeccCCCCeEEEe
Confidence            6  4579999999999999999999999999999   8888888                      55   678899999


Q ss_pred             ecCCccCCCCCCC-------CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHH
Q psy3347         155 DFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE---EEVFDSI  224 (245)
Q Consensus       155 Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~---~~~~~~~  224 (245)
                      |||+++.......       ......|+..|+|||.+.+..++.++|||||||++|+|++|+.||.+...   ......+
T Consensus       151 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  230 (296)
T 4hgt_A          151 DFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI  230 (296)
T ss_dssp             CCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHH
T ss_pred             cCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhh
Confidence            9999875332211       12355789999999999998999999999999999999999999976432   2222333


Q ss_pred             hcCcccC-----CCCCChhHHhhhc
Q psy3347         225 VNDEVRY-----PRFLSLEAIAIMR  244 (245)
Q Consensus       225 ~~~~~~~-----p~~~~~~~~~li~  244 (245)
                      .......     +..+++++.+||+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~l~~li~  255 (296)
T 4hgt_A          231 SEKKMSTPIEVLCKGYPSEFATYLN  255 (296)
T ss_dssp             HHHHHHSCHHHHTTTSCHHHHHHHH
T ss_pred             hcccccchhhhhhccCCHHHHHHHH
Confidence            3222222     2667888888775


No 207
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=2.1e-35  Score=246.98  Aligned_cols=176  Identities=20%  Similarity=0.351  Sum_probs=148.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcC-CCceeeeeEEEee--CCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMR-HPFLVNLFACFQT--EAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~-h~ni~~~~~~~~~--~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|++..+|+.||+|+++...      .+.+.+|   +++++.++ ||||+++++++..  ....+++|||+.+++|..
T Consensus        52 V~~~~~~~~~~~vavK~~~~~~------~~~~~~E---~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~  122 (330)
T 3nsz_A           52 VFEAINITNNEKVVVKILKPVK------KKKIKRE---IKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ  122 (330)
T ss_dssp             EEEEEETTTCCEEEEEEECSCC------HHHHHHH---HHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHH
T ss_pred             EEEEEECCCCcEEEEEEecccc------hHHHHHH---HHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHH
Confidence            7999999999999999997532      2334444   55566665 9999999999987  668999999999999998


Q ss_pred             hhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCC-ceEEeec
Q psy3347          78 HIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG-YVKIADF  156 (245)
Q Consensus        78 ~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~kl~Df  156 (245)
                      +++.  +++..+..++.|++.||+|||++|++|+   |+||+||                      +++.++ .++|+||
T Consensus       123 ~~~~--~~~~~~~~~~~qi~~~l~~lH~~~ivH~---Dikp~Ni----------------------l~~~~~~~~kl~Df  175 (330)
T 3nsz_A          123 LYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR---DVKPHNV----------------------MIDHEHRKLRLIDW  175 (330)
T ss_dssp             HGGG--CCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EEETTTTEEEECCC
T ss_pred             HHHh--CCHHHHHHHHHHHHHHHHHHHhCCeeeC---CCCHHHE----------------------EEcCCCCEEEEEeC
Confidence            8753  8899999999999999999999999999   8999888                      676555 8999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCC
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFP  213 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~  213 (245)
                      |+++..... .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.
T Consensus       176 g~a~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~  232 (330)
T 3nsz_A          176 GLAEFYHPG-QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF  232 (330)
T ss_dssp             TTCEECCTT-CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred             CCceEcCCC-CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            999753222 23445578889999999977 668999999999999999999999984


No 208
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=3.1e-36  Score=267.78  Aligned_cols=211  Identities=25%  Similarity=0.375  Sum_probs=173.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.+.. +..||||+++....    ..+.+.+   ++++++.++||||+++++++.. +..++||||+.+++|.++++
T Consensus       283 Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~---E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~  353 (535)
T 2h8h_A          283 VWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQ---EAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK  353 (535)
T ss_dssp             EEEEEETT-TEEEEEEEECTTSS----CHHHHHH---HHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHS
T ss_pred             EEEEEECC-CceEEEEEeCCCCC----CHHHHHH---HHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHh
Confidence            79998875 46799999986432    1234444   4777888999999999999866 67899999999999999995


Q ss_pred             h---cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          81 A---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        81 ~---~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      .   ..+++..+..++.|++.||+|||++||+||   ||+|+||                      +++.++.+||+|||
T Consensus       354 ~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHr---Dlkp~NI----------------------ll~~~~~~kl~DFG  408 (535)
T 2h8h_A          354 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR---DLRAANI----------------------LVGENLVCKVADFG  408 (535)
T ss_dssp             HHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE----------------------EECGGGCEEECCTT
T ss_pred             hcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC---CCCHhhE----------------------EEcCCCcEEEcccc
Confidence            3   458999999999999999999999999999   8889888                      77888899999999


Q ss_pred             CccCCCCCCC-CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-ccCCCC
Q psy3347         158 LCKEGMGFGD-RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VRYPRF  234 (245)
Q Consensus       158 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~p~~  234 (245)
                      +++....... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.+....+....+..+. .+.|..
T Consensus       409 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~  488 (535)
T 2h8h_A          409 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE  488 (535)
T ss_dssp             STTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTT
T ss_pred             cceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence            9975322111 1122345678999999988899999999999999999999 999999998888888876653 356788


Q ss_pred             CChhHHhhhcC
Q psy3347         235 LSLEAIAIMRR  245 (245)
Q Consensus       235 ~~~~~~~li~~  245 (245)
                      +++++.+||++
T Consensus       489 ~~~~l~~li~~  499 (535)
T 2h8h_A          489 CPESLHDLMCQ  499 (535)
T ss_dssp             CCHHHHHHHHH
T ss_pred             CCHHHHHHHHH
Confidence            99999999863


No 209
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=6.5e-36  Score=255.65  Aligned_cols=201  Identities=26%  Similarity=0.309  Sum_probs=146.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcC-----CCceeeeeEEEe----eCCeEEEEEeecc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMR-----HPFLVNLFACFQ----TEAHVCFVMEYAA   71 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~-----h~ni~~~~~~~~----~~~~~~lv~e~~~   71 (245)
                      ||+|++..+|+.||+|++...    ....+.+.+|.+++..++...     |+||+++++++.    ...+.|+||||+.
T Consensus        53 V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~  128 (397)
T 1wak_A           53 VWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLG  128 (397)
T ss_dssp             EEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred             EEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccC
Confidence            799999999999999999753    233455566655555554433     889999999997    4568999999995


Q ss_pred             CCchhhhhhh--cCCChHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCHHHHHHHHHHhhhccc---------------
Q psy3347          72 GGDLMMHIHA--DVFSEPRAVFYAACVVLGLQYLHES-RIIYRPQSNITKEEIKRIEAKVQENYK---------------  133 (245)
Q Consensus        72 ~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~~~~~i~~~~ik~~~~~~~~~~~---------------  133 (245)
                      ++.+..+.+.  ..+++..+..++.|++.||+|||++ ||+||   |+||+||     ++...-.               
T Consensus       129 ~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHr---Dikp~NI-----ll~~~~~~~~~~~~~~~~~~~~  200 (397)
T 1wak_A          129 HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHT---DIKPENI-----LLSVNEQYIRRLAAEATEWQRS  200 (397)
T ss_dssp             CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECC---CCSGGGE-----EECCCHHHHHHHHHHHC-----
T ss_pred             ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecC---CCCHHHe-----eEeccchhhhhhhhhhHHHhhc
Confidence            5444444433  4689999999999999999999998 99999   7777777     3221100               


Q ss_pred             -----------------cCcccchhccccCCCCceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHH
Q psy3347         134 -----------------VNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWW  196 (245)
Q Consensus       134 -----------------~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  196 (245)
                                       .................+||+|||++.....   ......||..|+|||.+.+..++.++|||
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  277 (397)
T 1wak_A          201 GAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK---HFTEDIQTRQYRSLEVLIGSGYNTPADIW  277 (397)
T ss_dssp             ----------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB---CSCSCCSCGGGCCHHHHHTSCCCTHHHHH
T ss_pred             CCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc---cCccCCCCCcccCChhhcCCCCCcHHHHH
Confidence                             0000000000001123799999999875322   23445789999999999998899999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCC
Q psy3347         197 GLGVLIFEMLVGESPFPGDD  216 (245)
Q Consensus       197 slG~~l~el~~g~~pf~~~~  216 (245)
                      ||||++|+|++|+.||.+.+
T Consensus       278 slG~il~elltg~~pf~~~~  297 (397)
T 1wak_A          278 STACMAFELATGDYLFEPHS  297 (397)
T ss_dssp             HHHHHHHHHHHSSCSCCCCC
T ss_pred             HHHHHHHHHhhCCCCCCCCc
Confidence            99999999999999997644


No 210
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=6.7e-36  Score=252.80  Aligned_cols=193  Identities=25%  Similarity=0.374  Sum_probs=153.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC-------eEEEEEeeccCC
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA-------HVCFVMEYAAGG   73 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~-------~~~lv~e~~~~~   73 (245)
                      ||+|+++.+|+.||+|++.......    .   ++.++++.++.++||||++++++|...+       ..++||||++++
T Consensus        39 V~~~~~~~~~~~vavK~~~~~~~~~----~---~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~  111 (360)
T 3e3p_A           39 VQLGKEKSTGMSVAIKKVIQDPRFR----N---RELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDT  111 (360)
T ss_dssp             CEEEEETTTCCEEEEEEEECCTTCC----C---HHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCB
T ss_pred             EEEEEECCCCCEEEEEEEecCcccc----H---HHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeeccccc
Confidence            8999999999999999987543211    1   2334466677789999999999996543       389999999875


Q ss_pred             chhhhh----hhcCCChHHHHHHHHHHHHHHHHhh--hcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC
Q psy3347          74 DLMMHI----HADVFSEPRAVFYAACVVLGLQYLH--ESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT  147 (245)
Q Consensus        74 ~L~~~~----~~~~l~~~~~~~i~~~i~~~l~~lH--~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~  147 (245)
                      .+....    ....+++..+..++.|++.||.|||  ++||+||   |+||+||                      +++.
T Consensus       112 l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~---Dlkp~NI----------------------ll~~  166 (360)
T 3e3p_A          112 LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHR---DIKPHNV----------------------LVNE  166 (360)
T ss_dssp             HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCS---CCCGGGE----------------------EEET
T ss_pred             HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecC---cCCHHHE----------------------EEeC
Confidence            332222    2346888999999999999999999  9999999   8999888                      6665


Q ss_pred             -CCceEEeecCCccCCCCCCCCCCcccCCCCccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         148 -EGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       148 -~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                       ++.+||+|||++..... ........||..|+|||.+.+. .++.++|||||||++|+|++|+.||.+.+..+....+.
T Consensus       167 ~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~  245 (360)
T 3e3p_A          167 ADGTLKLCDFGSAKKLSP-SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV  245 (360)
T ss_dssp             TTTEEEECCCTTCBCCCT-TSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCCcEEEeeCCCceecCC-CCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHH
Confidence             88999999999975432 2234455789999999999765 48999999999999999999999999888777776664


Q ss_pred             c
Q psy3347         226 N  226 (245)
Q Consensus       226 ~  226 (245)
                      .
T Consensus       246 ~  246 (360)
T 3e3p_A          246 R  246 (360)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 211
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=1.4e-35  Score=242.73  Aligned_cols=204  Identities=21%  Similarity=0.360  Sum_probs=164.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee----------------CCeEE
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT----------------EAHVC   64 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~----------------~~~~~   64 (245)
                      ||+|++..+|+.||+|++....       +.+   .++++.++.++||||+++++++..                .+..+
T Consensus        27 V~~~~~~~~~~~vavK~~~~~~-------~~~---~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (284)
T 2a19_B           27 VFKAKHRIDGKTYVIKRVKYNN-------EKA---EREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLF   96 (284)
T ss_dssp             EEEEEETTTCCEEEEEEEECCS-------GGG---HHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEE
T ss_pred             EEEEEEcCCCeEEEEEEecccc-------HHH---HHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEE
Confidence            7999999999999999998642       122   234677788899999999999854                44689


Q ss_pred             EEEeeccCCchhhhhhh---cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchh
Q psy3347          65 FVMEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIK  141 (245)
Q Consensus        65 lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~  141 (245)
                      +||||+++++|.+++..   ..+++..+..++.|++.||.|||++|++|+   |++|+||                    
T Consensus        97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~---dlkp~Ni--------------------  153 (284)
T 2a19_B           97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINR---DLKPSNI--------------------  153 (284)
T ss_dssp             EEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE--------------------
T ss_pred             EEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeec---cCCHHHE--------------------
Confidence            99999999999999853   468999999999999999999999999999   8999888                    


Q ss_pred             ccccCCCCceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q psy3347         142 LTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVF  221 (245)
Q Consensus       142 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~  221 (245)
                        +++.++.++|+|||++....... ......++..|+|||.+.+..++.++||||||+++|+|++|..||...  ....
T Consensus       154 --l~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~  228 (284)
T 2a19_B          154 --FLVDTKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFF  228 (284)
T ss_dssp             --EEEETTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHH
T ss_pred             --EEcCCCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHH
Confidence              77888999999999987543322 234456899999999999888999999999999999999999887432  2222


Q ss_pred             HHHhcCcccCCCCCChhHHhhhc
Q psy3347         222 DSIVNDEVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       222 ~~~~~~~~~~p~~~~~~~~~li~  244 (245)
                      ..+..  ..++..++++++++|+
T Consensus       229 ~~~~~--~~~~~~~~~~~~~li~  249 (284)
T 2a19_B          229 TDLRD--GIISDIFDKKEKTLLQ  249 (284)
T ss_dssp             HHHHT--TCCCTTSCHHHHHHHH
T ss_pred             HHhhc--ccccccCCHHHHHHHH
Confidence            32322  2355677888888775


No 212
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=2e-35  Score=247.32  Aligned_cols=191  Identities=23%  Similarity=0.378  Sum_probs=153.9

Q ss_pred             CEeEEE-ecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhh---cCCCceeeeeEEEeeCCeEEEEEeeccCCchh
Q psy3347           1 VILSQY-RNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANT---MRHPFLVNLFACFQTEAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~---~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|.+ +.+|+.||+|+++..    ....+.+.+|.+++..++.   ..|++++++++++...++.++||||+ +++|.
T Consensus        30 V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~  104 (339)
T 1z57_A           30 VVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTY  104 (339)
T ss_dssp             EEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred             EEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHH
Confidence            799988 567999999999753    2233445555444444432   23556999999999999999999999 77998


Q ss_pred             hhhhhc---CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC------
Q psy3347          77 MHIHAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT------  147 (245)
Q Consensus        77 ~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~------  147 (245)
                      +++...   ++++..+..++.|++.||+|||++|++|+   |+||+||                      +++.      
T Consensus       105 ~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~---Dlkp~Ni----------------------l~~~~~~~~~  159 (339)
T 1z57_A          105 DFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHT---DLKPENI----------------------LFVQSDYTEA  159 (339)
T ss_dssp             HHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EESCCCEEEE
T ss_pred             HHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCC---CCCHHHE----------------------EEeccccccc
Confidence            888543   58899999999999999999999999999   8888887                      4433      


Q ss_pred             -------------CCceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q psy3347         148 -------------EGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPG  214 (245)
Q Consensus       148 -------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~  214 (245)
                                   ++.++|+|||++....   .......||..|+|||.+.+..++.++|||||||++|+|++|..||.+
T Consensus       160 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  236 (339)
T 1z57_A          160 YNPKIKRDERTLINPDIKVVDFGSATYDD---EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPT  236 (339)
T ss_dssp             EC----CEEEEESCCCEEECCCSSCEETT---SCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cCCccccccccccCCCceEeeCcccccCc---cccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence                         6689999999987522   223455789999999999988999999999999999999999999998


Q ss_pred             CCHHHHHHHH
Q psy3347         215 DDEEEVFDSI  224 (245)
Q Consensus       215 ~~~~~~~~~~  224 (245)
                      .+..+....+
T Consensus       237 ~~~~~~~~~~  246 (339)
T 1z57_A          237 HDSKEHLAMM  246 (339)
T ss_dssp             SCHHHHHHHH
T ss_pred             CChHHHHHHH
Confidence            8776655544


No 213
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=4.1e-36  Score=252.46  Aligned_cols=213  Identities=21%  Similarity=0.321  Sum_probs=166.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||||++.....  ......+..+  +...++.++||||+++++++..++..++||||+++ +|.+++.
T Consensus        67 Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e--~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~  141 (340)
T 3an0_A           67 VEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMD--LDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYK  141 (340)
T ss_dssp             EEEEEETTTTEEEEEEEECSCCC--CHHHHHHHHH--HHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-EHHHHHH
T ss_pred             EEEEEEcCCCCEEEEEEeccccC--cHHHHHHHHH--HHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-cHHHHHH
Confidence            79999999999999999976432  1222333332  22336788999999999999999999999999976 8877764


Q ss_pred             -----hcCCChHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          81 -----ADVFSEPRAVFYAACVVLGLQYLHES-RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        81 -----~~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                           ...+++..+..++.|++.||+|||++ |++|+   |++|+||                      +++.++.+||+
T Consensus       142 ~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~---Dlkp~NI----------------------l~~~~~~~kl~  196 (340)
T 3an0_A          142 QVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR---DVKPSNV----------------------LINALGQVKMC  196 (340)
T ss_dssp             HHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCC---SCCSTTE----------------------EECSTTCEEEC
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC---CCCHHHE----------------------EECCCCCEEEe
Confidence                 35789999999999999999999997 99999   8999888                      88889999999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCccccccccC----CCCCcchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhcCc-
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE----TSYTRAVDWWGLGVLIFEMLVGESPFPGD-DEEEVFDSIVNDE-  228 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~~l~el~~g~~pf~~~-~~~~~~~~~~~~~-  228 (245)
                      |||++...... .......|+..|+|||.+.+    ..++.++|||||||++|+|++|+.||... ........+.... 
T Consensus       197 Dfg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~  275 (340)
T 3an0_A          197 DFGISGYLVDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS  275 (340)
T ss_dssp             CCSHHHHHSCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC
T ss_pred             eCCCceecccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCC
Confidence            99998643211 11223468999999999743    46889999999999999999999999763 4444445544433 


Q ss_pred             ccCC-CCCChhHHhhhc
Q psy3347         229 VRYP-RFLSLEAIAIMR  244 (245)
Q Consensus       229 ~~~p-~~~~~~~~~li~  244 (245)
                      ...+ ..+++++.+||+
T Consensus       276 ~~~~~~~~~~~~~~li~  292 (340)
T 3an0_A          276 PQLPADKFSAEFVDFTS  292 (340)
T ss_dssp             CCCCGGGSCHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHH
Confidence            2333 458889998876


No 214
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=9.1e-36  Score=247.83  Aligned_cols=213  Identities=19%  Similarity=0.308  Sum_probs=163.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee----CCeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT----EAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~----~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|++..+|+.||+|++...   .....+.+.   +++++++.++||||+++++++..    .+..++||||+.+++|.
T Consensus        45 V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~---~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~  118 (317)
T 2buj_A           45 VDLVEGLHDGHFYALKRILCH---EQQDREEAQ---READMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLW  118 (317)
T ss_dssp             EEEEEETTTCCEEEEEEEEES---SHHHHHHHH---HHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHH
T ss_pred             EEEEEecCCCcEEEEEEEecC---CHHHHHHHH---HHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHH
Confidence            799999999999999998753   223334444   44777888999999999999863    34789999999999999


Q ss_pred             hhhhh-----cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCce
Q psy3347          77 MHIHA-----DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYV  151 (245)
Q Consensus        77 ~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (245)
                      +++..     ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.+
T Consensus       119 ~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~---dlkp~NI----------------------l~~~~~~~  173 (317)
T 2buj_A          119 NEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHR---DLKPTNI----------------------LLGDEGQP  173 (317)
T ss_dssp             HHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EECTTSCE
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC---CCCHHHE----------------------EEcCCCCE
Confidence            88853     568999999999999999999999999999   9999998                      88888999


Q ss_pred             EEeecCCccCCCCCCCC---------CCcccCCCCccccccccCCC---CCcchhHHHHHHHHHHHHhCCCCCCCC--CH
Q psy3347         152 KIADFGLCKEGMGFGDR---------TGTFCGTPEFLAPEVLTETS---YTRAVDWWGLGVLIFEMLVGESPFPGD--DE  217 (245)
Q Consensus       152 kl~Dfg~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~~l~el~~g~~pf~~~--~~  217 (245)
                      +|+|||++.........         .....|+..|+|||.+.+..   ++.++||||||+++|+|++|+.||...  ..
T Consensus       174 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~  253 (317)
T 2buj_A          174 VLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG  253 (317)
T ss_dssp             EECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT
T ss_pred             EEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc
Confidence            99999987643211110         11234688999999997543   688999999999999999999999531  11


Q ss_pred             HHHHHHHhcC-cccCCCCCChhHHhhhc
Q psy3347         218 EEVFDSIVND-EVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       218 ~~~~~~~~~~-~~~~p~~~~~~~~~li~  244 (245)
                      ......+... ..+.+..+++++.++|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~l~~li~  281 (317)
T 2buj_A          254 DSVALAVQNQLSIPQSPRHSSALWQLLN  281 (317)
T ss_dssp             SCHHHHHHCC--CCCCTTSCHHHHHHHH
T ss_pred             chhhHHhhccCCCCccccCCHHHHHHHH
Confidence            1111222221 22334578888888875


No 215
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=1.1e-35  Score=244.51  Aligned_cols=211  Identities=20%  Similarity=0.388  Sum_probs=155.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++.   ..||+|+++.... .....+.+.   ++++.++.++||||+++++++ ..+..++||||+++++|.+++.
T Consensus        40 Vy~~~~~---~~vavK~~~~~~~-~~~~~~~~~---~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~  111 (289)
T 3og7_A           40 VYKGKWH---GDVAVKMLNVTAP-TPQQLQAFK---NEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLH  111 (289)
T ss_dssp             EEEEESS---SEEEEEEESCSSC-CHHHHHHHH---HHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHT
T ss_pred             EEEEEEc---CceEEEEEeccCC-CHHHHHHHH---HHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHh
Confidence            6888764   3599999976432 223334444   447788899999999999965 5567899999999999998884


Q ss_pred             --hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 --ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 --~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                        ...+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++|+|||+
T Consensus       112 ~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~---Dlkp~Ni----------------------l~~~~~~~kl~Dfg~  166 (289)
T 3og7_A          112 ASETKFEMKKLIDIARQTARGMDYLHAKSIIHR---DLKSNNI----------------------FLHEDNTVKIGDFGL  166 (289)
T ss_dssp             TC---CCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EEETTTEEEECCCC-
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHHHhCCcccc---cCccceE----------------------EECCCCCEEEcccee
Confidence              3468999999999999999999999999999   9999998                      888889999999999


Q ss_pred             ccCCCCC--CCCCCcccCCCCcccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHhcCccc--
Q psy3347         159 CKEGMGF--GDRTGTFCGTPEFLAPEVLT---ETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVF-DSIVNDEVR--  230 (245)
Q Consensus       159 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~-~~~~~~~~~--  230 (245)
                      +......  ........|+..|+|||.+.   +..++.++||||||+++|+|++|+.||.+....+.. ..+..+...  
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~  246 (289)
T 3og7_A          167 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD  246 (289)
T ss_dssp             -----------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCC
T ss_pred             ccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcc
Confidence            8743221  11233456899999999996   566888999999999999999999999876554443 333333222  


Q ss_pred             ---CCCCCChhHHhhhc
Q psy3347         231 ---YPRFLSLEAIAIMR  244 (245)
Q Consensus       231 ---~p~~~~~~~~~li~  244 (245)
                         .+..+++++++||+
T Consensus       247 ~~~~~~~~~~~l~~li~  263 (289)
T 3og7_A          247 LSKVRSNCPKRMKRLMA  263 (289)
T ss_dssp             TTSSCTTSCHHHHHHHH
T ss_pred             hhhccccCCHHHHHHHH
Confidence               23578888888875


No 216
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=5.9e-36  Score=251.50  Aligned_cols=207  Identities=26%  Similarity=0.461  Sum_probs=140.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee----CCeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT----EAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~----~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|+++.+|+.||+|++....    .    ..+  ++...++.++||||+++++++..    ++..++||||+++++|.
T Consensus        45 V~~~~~~~~~~~vavK~~~~~~----~----~~~--e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~  114 (336)
T 3fhr_A           45 VLECFHRRTGQKCALKLLYDSP----K----ARQ--EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELF  114 (336)
T ss_dssp             EEEEEETTTCCEEEEEEEESSH----H----HHH--HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHH
T ss_pred             EEEEEECCCCCEEEEEEecCcH----H----HHH--HHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHH
Confidence            7999999999999999997531    1    111  12233556789999999999976    45689999999999999


Q ss_pred             hhhhhc---CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC---CCc
Q psy3347          77 MHIHAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT---EGY  150 (245)
Q Consensus        77 ~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  150 (245)
                      +++...   .+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.   ++.
T Consensus       115 ~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~---dlkp~NI----------------------ll~~~~~~~~  169 (336)
T 3fhr_A          115 SRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHR---DVKPENL----------------------LYTSKEKDAV  169 (336)
T ss_dssp             HHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECS---CCSGGGE----------------------EESCSSTTCC
T ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecC---CCCHHHE----------------------EEEecCCCce
Confidence            998643   58999999999999999999999999999   8888888                      5544   566


Q ss_pred             eEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhc
Q psy3347         151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEV----FDSIVN  226 (245)
Q Consensus       151 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~----~~~~~~  226 (245)
                      ++|+|||++.....  .......+++.|+|||.+.+..++.++||||||+++|+|++|+.||.+......    ...+..
T Consensus       170 ~kl~Dfg~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  247 (336)
T 3fhr_A          170 LKLTDFGFAKETTQ--NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL  247 (336)
T ss_dssp             EEECCCTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------
T ss_pred             EEEeccccceeccc--cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhc
Confidence            99999999875322  223345678999999999888899999999999999999999999976554333    222222


Q ss_pred             CcccCC----CCCChhHHhhhc
Q psy3347         227 DEVRYP----RFLSLEAIAIMR  244 (245)
Q Consensus       227 ~~~~~p----~~~~~~~~~li~  244 (245)
                      ....+|    ..+++++++||+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~li~  269 (336)
T 3fhr_A          248 GQYGFPNPEWSEVSEDAKQLIR  269 (336)
T ss_dssp             ---CCCTTTSTTCCHHHHHHHH
T ss_pred             cccccCchhhccCCHHHHHHHH
Confidence            222222    568889988876


No 217
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=1e-35  Score=255.96  Aligned_cols=183  Identities=25%  Similarity=0.377  Sum_probs=142.2

Q ss_pred             CEeEEEe--cCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee--CCeEEEEEeeccCCchh
Q psy3347           1 VILSQYR--NTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT--EAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~--~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|+++  .+++.||+|++......     ..+.   +++++++.++||||+++++++..  ....++||||+++ +|.
T Consensus        37 Vy~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~---~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~  107 (405)
T 3rgf_A           37 VYKAKRKDGKDDKDYALKQIEGTGIS-----MSAC---REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLW  107 (405)
T ss_dssp             EEEEEESSSSCCCCEEEEECSSSSCC-----HHHH---HHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-EHH
T ss_pred             EEEEEEccCCCCeEEEEEEECCCCCC-----HHHH---HHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHH
Confidence            7999976  57899999999754321     2233   44777888999999999999954  6789999999975 776


Q ss_pred             hhhhh----------cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc-
Q psy3347          77 MHIHA----------DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN-  145 (245)
Q Consensus        77 ~~~~~----------~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~-  145 (245)
                      +++..          ..+++..++.++.|++.||+|||++||+||   |+||+||                      ++ 
T Consensus       108 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~---Dlkp~NI----------------------ll~  162 (405)
T 3rgf_A          108 HIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHR---DLKPANI----------------------LVM  162 (405)
T ss_dssp             HHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EEC
T ss_pred             HHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCC---CcCHHHe----------------------EEe
Confidence            66532          138999999999999999999999999999   8888888                      55 


Q ss_pred             ---CCCCceEEeecCCccCCCCCC---CCCCcccCCCCccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCH
Q psy3347         146 ---DTEGYVKIADFGLCKEGMGFG---DRTGTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIFEMLVGESPFPGDDE  217 (245)
Q Consensus       146 ---~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~g~~pf~~~~~  217 (245)
                         +.++.+||+|||+++......   ......+||+.|+|||.+.+. .++.++|||||||++|+|++|+.||.+...
T Consensus       163 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  241 (405)
T 3rgf_A          163 GEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE  241 (405)
T ss_dssp             CSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred             cCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccc
Confidence               667899999999997543221   123456789999999999874 589999999999999999999999976543


No 218
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=2.7e-35  Score=246.44  Aligned_cols=210  Identities=19%  Similarity=0.316  Sum_probs=144.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcC-CCceeeeeEEEe--------eCCeEEEEEeecc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMR-HPFLVNLFACFQ--------TEAHVCFVMEYAA   71 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~-h~ni~~~~~~~~--------~~~~~~lv~e~~~   71 (245)
                      ||+|++..+|+.||+|++...   .....+.+.+|   +..++.+. ||||+++++++.        ..+..+++|||+.
T Consensus        44 V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e---~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~  117 (337)
T 3ll6_A           44 VYEAQDVGSGREYALKRLLSN---EEEKNRAIIQE---VCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK  117 (337)
T ss_dssp             EEEEEETTTCCEEEEEEEEES---SHHHHHHHHHH---HHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS
T ss_pred             EEEEEECCCCcEEEEEEecCC---chHHHHHHHHH---HHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC
Confidence            799999999999999998654   22333344444   55566664 999999999984        3446899999996


Q ss_pred             CCchhhhhh----hcCCChHHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc
Q psy3347          72 GGDLMMHIH----ADVFSEPRAVFYAACVVLGLQYLHESR--IIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN  145 (245)
Q Consensus        72 ~~~L~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~  145 (245)
                       |+|.+++.    ...+++..+..++.|++.||+|||++|  ++|+   |++|+||                      ++
T Consensus       118 -g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~---Dikp~NI----------------------l~  171 (337)
T 3ll6_A          118 -GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHR---DLKVENL----------------------LL  171 (337)
T ss_dssp             -EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCC---CCCGGGC----------------------EE
T ss_pred             -CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEc---cCCcccE----------------------EE
Confidence             58877774    356999999999999999999999999  9999   9999999                      88


Q ss_pred             CCCCceEEeecCCccCCCCCCC------------CCCcccCCCCccccccc---cCCCCCcchhHHHHHHHHHHHHhCCC
Q psy3347         146 DTEGYVKIADFGLCKEGMGFGD------------RTGTFCGTPEFLAPEVL---TETSYTRAVDWWGLGVLIFEMLVGES  210 (245)
Q Consensus       146 ~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~y~aPE~~---~~~~~~~~~DvwslG~~l~el~~g~~  210 (245)
                      +.++.+||+|||++........            ......|++.|+|||.+   .+..++.++||||||+++|+|++|+.
T Consensus       172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~  251 (337)
T 3ll6_A          172 SNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQH  251 (337)
T ss_dssp             CTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCC
Confidence            8899999999999875432211            11134588899999998   45678899999999999999999999


Q ss_pred             CCCCCCHHHHHHHHhcCcccCCCCCChhHHhhhc
Q psy3347         211 PFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       211 pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~  244 (245)
                      ||.............  ..+.+...++.+.+||+
T Consensus       252 p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~  283 (337)
T 3ll6_A          252 PFEDGAKLRIVNGKY--SIPPHDTQYTVFHSLIR  283 (337)
T ss_dssp             CC------------C--CCCTTCCSSGGGHHHHH
T ss_pred             CCcchhHHHhhcCcc--cCCcccccchHHHHHHH
Confidence            997655443322211  22334566777777765


No 219
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=8.6e-36  Score=248.69  Aligned_cols=183  Identities=26%  Similarity=0.401  Sum_probs=153.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++ +|+.||+|++....   ....+.+.   ++++.++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        55 Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  127 (321)
T 2qkw_B           55 VYKGVLR-DGAKVALKRRTPES---SQGIEEFE---TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY  127 (321)
T ss_dssp             EEEEECT-TCCEEEEEECCSCC---SSHHHHHH---HHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSS
T ss_pred             EEEEEEC-CCCEEEEEEecccC---hHHHHHHH---HHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHh
Confidence            7999864 68999999987642   22233443   44778889999999999999999999999999999999999885


Q ss_pred             hc-----CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          81 AD-----VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        81 ~~-----~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      ..     .+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.+||+|
T Consensus       128 ~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~---dlkp~Ni----------------------l~~~~~~~kl~D  182 (321)
T 2qkw_B          128 GSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHR---DVKSINI----------------------LLDENFVPKITD  182 (321)
T ss_dssp             SSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCCSTTE----------------------EECTTCCEEECC
T ss_pred             ccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecC---CCCHHHE----------------------EECCCCCEEEee
Confidence            43     48899999999999999999999999999   8999888                      888899999999


Q ss_pred             cCCccCCCCC--CCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q psy3347         156 FGLCKEGMGF--GDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD  215 (245)
Q Consensus       156 fg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~  215 (245)
                      ||++......  ........|+..|+|||.+.+..++.++||||||+++|+|++|+.||.+.
T Consensus       183 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~  244 (321)
T 2qkw_B          183 FGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS  244 (321)
T ss_dssp             CTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCS
T ss_pred             cccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCccccc
Confidence            9998743221  11223446789999999998888999999999999999999999999654


No 220
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.2e-36  Score=249.46  Aligned_cols=212  Identities=24%  Similarity=0.403  Sum_probs=161.7

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc----CCCceeeeeEEEeeCCeEEEEEee-ccCCch
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM----RHPFLVNLFACFQTEAHVCFVMEY-AAGGDL   75 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~----~h~ni~~~~~~~~~~~~~~lv~e~-~~~~~L   75 (245)
                      ||+|++..+|+.||+|++..................+++..++.+    +||||+++++++...+..+++||+ +.+++|
T Consensus        47 Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L  126 (312)
T 2iwi_A           47 VFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDL  126 (312)
T ss_dssp             EEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEH
T ss_pred             EEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCH
Confidence            799999999999999999765432211111111222335555555    899999999999999999999999 788999


Q ss_pred             hhhhh-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccC-CCCceEE
Q psy3347          76 MMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVND-TEGYVKI  153 (245)
Q Consensus        76 ~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~kl  153 (245)
                      .+++. ...+++..+..++.|++.||+|||++|++|+   |++|+||                      +++ .++.++|
T Consensus       127 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~---dlkp~Ni----------------------l~~~~~~~~kl  181 (312)
T 2iwi_A          127 FDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHR---DIKDENI----------------------LIDLRRGCAKL  181 (312)
T ss_dssp             HHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECC---CCSGGGE----------------------EEETTTTEEEE
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec---CCChhhE----------------------EEeCCCCeEEE
Confidence            99885 4569999999999999999999999999999   8889888                      676 7889999


Q ss_pred             eecCCccCCCCCCCCCCcccCCCCccccccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCC
Q psy3347         154 ADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYT-RAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYP  232 (245)
Q Consensus       154 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p  232 (245)
                      +|||++......  ......|+..|+|||.+.+..+. .++||||||+++|+|++|+.||.+..      .+......+|
T Consensus       182 ~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~  253 (312)
T 2iwi_A          182 IDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELHFP  253 (312)
T ss_dssp             CCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHTCCCCC
T ss_pred             EEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhhhccCCc
Confidence            999998754322  23455688999999999776654 58999999999999999999997532      2334455677


Q ss_pred             CCCChhHHhhhcC
Q psy3347         233 RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ~~~~~~~~~li~~  245 (245)
                      ..++++++++|++
T Consensus       254 ~~~~~~~~~li~~  266 (312)
T 2iwi_A          254 AHVSPDCCALIRR  266 (312)
T ss_dssp             TTSCHHHHHHHHH
T ss_pred             ccCCHHHHHHHHH
Confidence            8889988888763


No 221
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.2e-35  Score=245.14  Aligned_cols=180  Identities=24%  Similarity=0.410  Sum_probs=145.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee----CCeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT----EAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~----~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|++  +|+.||+|++....      .....+|.+++ ....++||||+++++++..    .+..++||||+++++|.
T Consensus        24 V~~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~-~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~   94 (301)
T 3q4u_A           24 VWRGSW--QGENVAVKIFSSRD------EKSWFRETELY-NTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLY   94 (301)
T ss_dssp             EEEEEE--TTEEEEEEEECGGG------HHHHHHHHHHH-HHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHH
T ss_pred             EEEEEE--CCEEEEEEEecccc------chhhHHHHHHH-HHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHH
Confidence            788877  69999999997531      22333333322 2334789999999998754    34689999999999999


Q ss_pred             hhhhhcCCChHHHHHHHHHHHHHHHHhh--------hcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCC
Q psy3347          77 MHIHADVFSEPRAVFYAACVVLGLQYLH--------ESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTE  148 (245)
Q Consensus        77 ~~~~~~~l~~~~~~~i~~~i~~~l~~lH--------~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (245)
                      ++++...+++..+..++.|++.||+|||        ++|++||   |+||+||                      +++.+
T Consensus        95 ~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~---Dlkp~Ni----------------------ll~~~  149 (301)
T 3q4u_A           95 DYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHR---DLKSKNI----------------------LVKKN  149 (301)
T ss_dssp             HHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECS---CCCGGGE----------------------EECTT
T ss_pred             HHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecC---CCChHhE----------------------EEcCC
Confidence            9998888999999999999999999999        9999999   9999999                      88889


Q ss_pred             CceEEeecCCccCCCCCCC----CCCcccCCCCccccccccCC------CCCcchhHHHHHHHHHHHHhC----------
Q psy3347         149 GYVKIADFGLCKEGMGFGD----RTGTFCGTPEFLAPEVLTET------SYTRAVDWWGLGVLIFEMLVG----------  208 (245)
Q Consensus       149 ~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~~l~el~~g----------  208 (245)
                      +.+||+|||+++.......    ......||+.|+|||.+.+.      .++.++|||||||++|||++|          
T Consensus       150 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~  229 (301)
T 3q4u_A          150 GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY  229 (301)
T ss_dssp             SCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred             CCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccc
Confidence            9999999999864322211    12334789999999999776      445789999999999999999          


Q ss_pred             CCCCCC
Q psy3347         209 ESPFPG  214 (245)
Q Consensus       209 ~~pf~~  214 (245)
                      ..||..
T Consensus       230 ~~pf~~  235 (301)
T 3q4u_A          230 KPPFYD  235 (301)
T ss_dssp             CCTTTT
T ss_pred             cccccc
Confidence            888854


No 222
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=2.8e-35  Score=249.34  Aligned_cols=197  Identities=24%  Similarity=0.343  Sum_probs=149.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccch-----hhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee-----CCeEEEEEeec
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIAR-----DEVESLLSEKRIFEVANTMRHPFLVNLFACFQT-----EAHVCFVMEYA   70 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~-----~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~-----~~~~~lv~e~~   70 (245)
                      ||+|.+.. |+.||+|++........     .......+..+++++++.++||||+++++++..     ....++||||+
T Consensus        38 V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~  116 (362)
T 3pg1_A           38 VCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM  116 (362)
T ss_dssp             EEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECC
T ss_pred             EEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccC
Confidence            79998865 99999999965332111     011111223445777888999999999999854     34789999999


Q ss_pred             cCCchhhhhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCC
Q psy3347          71 AGGDLMMHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTE  148 (245)
Q Consensus        71 ~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (245)
                      ++ +|.+++..  ..+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.+
T Consensus       117 ~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~---Dlkp~NI----------------------l~~~~  170 (362)
T 3pg1_A          117 RT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHR---DLHPGNI----------------------LLADN  170 (362)
T ss_dssp             SE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EECTT
T ss_pred             CC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEec---CCChHHE----------------------EEcCC
Confidence            84 77777643  368999999999999999999999999999   9999999                      88889


Q ss_pred             CceEEeecCCccCCCCCCCCCCcccCCCCccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         149 GYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       149 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      +.++|+|||++...... .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.
T Consensus       171 ~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~  247 (362)
T 3pg1_A          171 NDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV  247 (362)
T ss_dssp             CCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            99999999998743222 22344578889999999977 678999999999999999999999999888777766654


No 223
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=4.6e-36  Score=250.45  Aligned_cols=209  Identities=23%  Similarity=0.339  Sum_probs=166.7

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchh---hHHHHHHHHHHHHHHhhcC--CCceeeeeEEEeeCCeEEEEEeeccC-Cc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARD---EVESLLSEKRIFEVANTMR--HPFLVNLFACFQTEAHVCFVMEYAAG-GD   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~---~~~~~~~e~~~~~~l~~~~--h~ni~~~~~~~~~~~~~~lv~e~~~~-~~   74 (245)
                      ||+|++..+|+.||+|++.........   ..+.+.+|   +.+++.++  ||||+++++++...+..+++||++.+ ++
T Consensus        59 Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E---~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~  135 (320)
T 3a99_A           59 VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME---VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD  135 (320)
T ss_dssp             EEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHH---HHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEE
T ss_pred             EEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHH---HHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCcc
Confidence            799999999999999999865432211   11223333   45555554  69999999999999999999999975 89


Q ss_pred             hhhhhh-hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccC-CCCceE
Q psy3347          75 LMMHIH-ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVND-TEGYVK  152 (245)
Q Consensus        75 L~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k  152 (245)
                      |.+++. ...+++..+..++.|++.||+|||++|++|+   |++|+||                      +++ .++.+|
T Consensus       136 L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~---Dlkp~NI----------------------ll~~~~~~~k  190 (320)
T 3a99_A          136 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHR---DIKDENI----------------------LIDLNRGELK  190 (320)
T ss_dssp             HHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EEETTTTEEE
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeC---CCCHHHE----------------------EEeCCCCCEE
Confidence            998885 4678999999999999999999999999999   8999888                      676 678999


Q ss_pred             EeecCCccCCCCCCCCCCcccCCCCccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccC
Q psy3347         153 IADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRY  231 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~  231 (245)
                      |+|||++......  ......|+..|+|||.+.+..+ +.++||||||+++|+|++|+.||....      .+......+
T Consensus       191 L~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~  262 (320)
T 3a99_A          191 LIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFF  262 (320)
T ss_dssp             ECCCTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCC
T ss_pred             EeeCccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhcccccc
Confidence            9999998754322  2334568999999999977665 678999999999999999999996532      233445556


Q ss_pred             CCCCChhHHhhhcC
Q psy3347         232 PRFLSLEAIAIMRR  245 (245)
Q Consensus       232 p~~~~~~~~~li~~  245 (245)
                      +..+++++.+||++
T Consensus       263 ~~~~~~~~~~li~~  276 (320)
T 3a99_A          263 RQRVSSECQHLIRW  276 (320)
T ss_dssp             SSCCCHHHHHHHHH
T ss_pred             cccCCHHHHHHHHH
Confidence            77888888888763


No 224
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=2.8e-35  Score=246.07  Aligned_cols=213  Identities=23%  Similarity=0.372  Sum_probs=147.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|.++.+|+.||+|++....  .......+..+  +..+++.++||||+++++++..++..++||||+++ +|.+++.
T Consensus        38 Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e--~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~  112 (327)
T 3aln_A           38 VNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMD--LDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYK  112 (327)
T ss_dssp             EEEEEETTTTEEEEEEEEECCC--CHHHHHHHHHH--HHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHH
T ss_pred             EEEEEEcCCCCEEEEEEeeccc--CchHHHHHHHH--HHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHH
Confidence            7999999999999999998642  22222233322  23367788999999999999999999999999986 7766664


Q ss_pred             ------hcCCChHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEE
Q psy3347          81 ------ADVFSEPRAVFYAACVVLGLQYLHES-RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKI  153 (245)
Q Consensus        81 ------~~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl  153 (245)
                            ...+++..+..++.|++.||.|||++ |++|+   |++|+||                      +++.++.+||
T Consensus       113 ~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~---dlkp~NI----------------------ll~~~~~~kl  167 (327)
T 3aln_A          113 YVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHR---DIKPSNI----------------------LLDRSGNIKL  167 (327)
T ss_dssp             HHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCS---CCCGGGE----------------------EEETTTEEEE
T ss_pred             HHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeEC---CCCHHHE----------------------EEcCCCCEEE
Confidence                  45689999999999999999999999 99999   9999998                      8888999999


Q ss_pred             eecCCccCCCCCCCCCCcccCCCCccccccc----cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCc
Q psy3347         154 ADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL----TETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE-EEVFDSIVNDE  228 (245)
Q Consensus       154 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~-~~~~~~~~~~~  228 (245)
                      +|||++....... ......|+..|+|||.+    .+..++.++||||||+++|+|++|+.||.+... .+....+..+.
T Consensus       168 ~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  246 (327)
T 3aln_A          168 CDFGISGQLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGD  246 (327)
T ss_dssp             CCCSSSCC-------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSC
T ss_pred             ccCCCceeccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCC
Confidence            9999987543222 23334688999999999    456688999999999999999999999976543 23333333332


Q ss_pred             cc-CC----CCCChhHHhhhc
Q psy3347         229 VR-YP----RFLSLEAIAIMR  244 (245)
Q Consensus       229 ~~-~p----~~~~~~~~~li~  244 (245)
                      .+ ++    ..+++++.+||+
T Consensus       247 ~~~~~~~~~~~~~~~l~~li~  267 (327)
T 3aln_A          247 PPQLSNSEEREFSPSFINFVN  267 (327)
T ss_dssp             CCCCCCCSSCCCCHHHHHHHH
T ss_pred             CCCCCCcccccCCHHHHHHHH
Confidence            22 22    457888888875


No 225
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=1e-34  Score=241.29  Aligned_cols=213  Identities=23%  Similarity=0.410  Sum_probs=159.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|+++.+|+.||+|++.....  ........  .++..+++.++||||+++++++..++..++||||+ ++.+.....
T Consensus        41 V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~--~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~  115 (318)
T 2dyl_A           41 VWKMRFRKTGHVIAVKQMRRSGN--KEENKRIL--MDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKK  115 (318)
T ss_dssp             EEEEEETTTCCEEEEEEEETTSC--HHHHHHHH--HHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHH
T ss_pred             EEEEEEecCCeEEEEEEeccccc--chHHHHHH--HHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHH
Confidence            79999999999999999986532  12222222  22334567789999999999999999999999999 445555543


Q ss_pred             --hcCCChHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          81 --ADVFSEPRAVFYAACVVLGLQYLHES-RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        81 --~~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                        ...+++..+..++.|++.||.|||++ |++|+   |++|+||                      +++.++.++|+|||
T Consensus       116 ~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~---dlkp~Ni----------------------l~~~~~~~kl~dfg  170 (318)
T 2dyl_A          116 RMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR---DVKPSNI----------------------LLDERGQIKLCDFG  170 (318)
T ss_dssp             HHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCGGGE----------------------EECTTSCEEECCCT
T ss_pred             HhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeC---CCCHHHE----------------------EECCCCCEEEEECC
Confidence              36789999999999999999999995 99999   8999998                      88889999999999


Q ss_pred             CccCCCCCCCCCCcccCCCCcccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhcCccc-
Q psy3347         158 LCKEGMGFGDRTGTFCGTPEFLAPEVLT-----ETSYTRAVDWWGLGVLIFEMLVGESPFPG-DDEEEVFDSIVNDEVR-  230 (245)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~~l~el~~g~~pf~~-~~~~~~~~~~~~~~~~-  230 (245)
                      ++...... .......++..|+|||.+.     ...++.++||||||+++|+|++|+.||.. ....+....+.....+ 
T Consensus       171 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  249 (318)
T 2dyl_A          171 ISGRLVDD-KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL  249 (318)
T ss_dssp             TC---------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCC
T ss_pred             CchhccCC-ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCC
Confidence            98653222 2233456889999999994     45678899999999999999999999976 4555666666555433 


Q ss_pred             CC--CCCChhHHhhhc
Q psy3347         231 YP--RFLSLEAIAIMR  244 (245)
Q Consensus       231 ~p--~~~~~~~~~li~  244 (245)
                      .|  ..+++++.+||+
T Consensus       250 ~~~~~~~~~~l~~li~  265 (318)
T 2dyl_A          250 LPGHMGFSGDFQSFVK  265 (318)
T ss_dssp             CCSSSCCCHHHHHHHH
T ss_pred             CCccCCCCHHHHHHHH
Confidence            33  457889988875


No 226
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.9e-35  Score=243.46  Aligned_cols=205  Identities=24%  Similarity=0.452  Sum_probs=157.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++.  ++.||+|++...     ...+.+.+|   ++.++.++||||+++++++.  +..++||||+++++|.+++.
T Consensus        24 V~~~~~~--~~~vavK~~~~~-----~~~~~~~~E---~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~   91 (307)
T 2eva_A           24 VCKAKWR--AKDVAIKQIESE-----SERKAFIVE---LRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLH   91 (307)
T ss_dssp             EEEEEET--TEEEEEEECSST-----THHHHHHHH---HHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHH
T ss_pred             EEEEEEC--CeeEEEEEecCh-----hHHHHHHHH---HHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHh
Confidence            6888774  889999999743     223344444   67778889999999999886  44799999999999999986


Q ss_pred             hc----CCChHHHHHHHHHHHHHHHHhhh---cCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCc-eE
Q psy3347          81 AD----VFSEPRAVFYAACVVLGLQYLHE---SRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY-VK  152 (245)
Q Consensus        81 ~~----~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~k  152 (245)
                      ..    .++...+..++.|++.||+|||+   +|++|+   |++|+||                      +++.++. +|
T Consensus        92 ~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~---dlkp~NI----------------------ll~~~~~~~k  146 (307)
T 2eva_A           92 GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR---DLKPPNL----------------------LLVAGGTVLK  146 (307)
T ss_dssp             CSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCC---CCSGGGE----------------------EEETTTTEEE
T ss_pred             ccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecC---CCChhHE----------------------EEeCCCCEEE
Confidence            43    36788999999999999999999   899999   8999888                      6666665 79


Q ss_pred             EeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHhcC-cc
Q psy3347         153 IADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD--DEEEVFDSIVND-EV  229 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~--~~~~~~~~~~~~-~~  229 (245)
                      |+|||++.....   ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...  ........+... ..
T Consensus       147 l~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~  223 (307)
T 2eva_A          147 ICDFGTACDIQT---HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP  223 (307)
T ss_dssp             ECCCCC---------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCC
T ss_pred             Eccccccccccc---ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCC
Confidence            999999864322   123446899999999999888999999999999999999999999754  333343344333 33


Q ss_pred             cCCCCCChhHHhhhcC
Q psy3347         230 RYPRFLSLEAIAIMRR  245 (245)
Q Consensus       230 ~~p~~~~~~~~~li~~  245 (245)
                      +.+..+++++.++|++
T Consensus       224 ~~~~~~~~~l~~li~~  239 (307)
T 2eva_A          224 PLIKNLPKPIESLMTR  239 (307)
T ss_dssp             CCBTTCCHHHHHHHHH
T ss_pred             CcccccCHHHHHHHHH
Confidence            4567889999888763


No 227
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=1.3e-35  Score=250.72  Aligned_cols=207  Identities=21%  Similarity=0.252  Sum_probs=159.2

Q ss_pred             CEeEEEecC--------CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceee---------------eeEEE
Q psy3347           1 VILSQYRNT--------GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVN---------------LFACF   57 (245)
Q Consensus         1 V~~a~~~~~--------~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~---------------~~~~~   57 (245)
                      ||+|++..+        ++.||+|++...        +.+.+|   +++++.++||||++               +++++
T Consensus        58 Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E---~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~  126 (352)
T 2jii_A           58 LYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNE---QNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFG  126 (352)
T ss_dssp             EEEEEECC-----------CEEEEEEETT--------STHHHH---HHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEE
T ss_pred             EEEEeecCCccccccccCceEEEEEeccc--------chHHHH---HHHHHHhcccchhhhhhhhccCCccCccchhhcc
Confidence            799999884        899999999753        223333   55666777888877               67777


Q ss_pred             ee-CCeEEEEEeeccCCchhhhhhh---cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccc
Q psy3347          58 QT-EAHVCFVMEYAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYK  133 (245)
Q Consensus        58 ~~-~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~  133 (245)
                      .. ++..++||||+ +++|.+++..   ..+++..+..++.|++.||+|||++|++||   |++|+||            
T Consensus       127 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~---Dikp~NI------------  190 (352)
T 2jii_A          127 VHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHG---NVTAENI------------  190 (352)
T ss_dssp             EETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCS---CCCGGGE------------
T ss_pred             ccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCC---CCCHHHE------------
Confidence            76 67899999999 8999999964   579999999999999999999999999999   9999888            


Q ss_pred             cCcccchhccccCCCC--ceEEeecCCccCCCCCCC-------CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHH
Q psy3347         134 VNSSQEIKLTVNDTEG--YVKIADFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFE  204 (245)
Q Consensus       134 ~~~~~~~~~~~~~~~~--~~kl~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~e  204 (245)
                                +++.++  .++|+|||+++.......       ......|+..|+|||.+.+..++.++||||||+++|+
T Consensus       191 ----------l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e  260 (352)
T 2jii_A          191 ----------FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLK  260 (352)
T ss_dssp             ----------EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             ----------EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHH
Confidence                      777777  899999999975332211       1234478999999999998889999999999999999


Q ss_pred             HHhCCCCCCCCC--HHHHHHHH---hcCcccCC------CCCChhHHhhhc
Q psy3347         205 MLVGESPFPGDD--EEEVFDSI---VNDEVRYP------RFLSLEAIAIMR  244 (245)
Q Consensus       205 l~~g~~pf~~~~--~~~~~~~~---~~~~~~~p------~~~~~~~~~li~  244 (245)
                      |++|+.||.+..  ........   ......++      ..+++++.+||+
T Consensus       261 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  311 (352)
T 2jii_A          261 WLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLK  311 (352)
T ss_dssp             HHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHH
T ss_pred             HHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHH
Confidence            999999997653  32232222   22222222      246888888875


No 228
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=3.9e-35  Score=266.14  Aligned_cols=214  Identities=25%  Similarity=0.385  Sum_probs=172.0

Q ss_pred             CEeEEEecC---CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNT---GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|.+..+   +..||+|+++...  .....+.+.   +++..++.++||||+++++++. ++..++||||+++++|.+
T Consensus       406 Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~---~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~  479 (656)
T 2j0j_A          406 VHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFL---QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRS  479 (656)
T ss_dssp             EEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHH---HHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHH
T ss_pred             EEEEEEecCCCccEEEEEEEecccC--CHHHHHHHH---HHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCcHHH
Confidence            799988754   4579999887532  222233444   4477788899999999999985 456899999999999999


Q ss_pred             hhhhc--CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          78 HIHAD--VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        78 ~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      +++..  .+++..+..++.|++.||.|||++||+||   |+||+||                      +++.++.+||+|
T Consensus       480 ~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHr---Dikp~NI----------------------Ll~~~~~vkL~D  534 (656)
T 2j0j_A          480 FLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR---DIAARNV----------------------LVSSNDCVKLGD  534 (656)
T ss_dssp             HHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCSGGGE----------------------EEEETTEEEECC
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccc---ccchHhE----------------------EEeCCCCEEEEe
Confidence            98643  58899999999999999999999999999   9999998                      888889999999


Q ss_pred             cCCccCCCCCCC-CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCc-ccCC
Q psy3347         156 FGLCKEGMGFGD-RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEEVFDSIVNDE-VRYP  232 (245)
Q Consensus       156 fg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~-~~~p  232 (245)
                      ||+++....... ......++..|+|||.+.+..++.++||||||+++|||++ |..||.+....+....+..+. .+.|
T Consensus       535 FG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~  614 (656)
T 2j0j_A          535 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP  614 (656)
T ss_dssp             CCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCC
T ss_pred             cCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            999975432221 1223345678999999988899999999999999999997 999999998888888887654 4568


Q ss_pred             CCCChhHHhhhcC
Q psy3347         233 RFLSLEAIAIMRR  245 (245)
Q Consensus       233 ~~~~~~~~~li~~  245 (245)
                      ..+++++.+||++
T Consensus       615 ~~~~~~l~~li~~  627 (656)
T 2j0j_A          615 PNCPPTLYSLMTK  627 (656)
T ss_dssp             TTCCHHHHHHHHH
T ss_pred             ccccHHHHHHHHH
Confidence            8899999998863


No 229
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=6.9e-35  Score=240.37  Aligned_cols=209  Identities=24%  Similarity=0.434  Sum_probs=158.7

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee-------------CCeEEEEE
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT-------------EAHVCFVM   67 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~-------------~~~~~lv~   67 (245)
                      ||+|++..+|+.||+|++...    ....+.+   .++++.++.++||||+++++++..             .+..++||
T Consensus        22 V~~~~~~~~~~~vaiK~~~~~----~~~~~~~---~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~   94 (303)
T 1zy4_A           22 VVKARNALDSRYYAIKKIRHT----EEKLSTI---LSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQM   94 (303)
T ss_dssp             EEEEEETTTCCEEEEEEEEEE----HHHHHHH---HHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEE
T ss_pred             EEEEEEcCCCeEEEEEEEecc----HHHHHHH---HHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEE
Confidence            799999999999999999642    2223334   345778889999999999998865             45789999


Q ss_pred             eeccCCchhhhhhhc--CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc
Q psy3347          68 EYAAGGDLMMHIHAD--VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN  145 (245)
Q Consensus        68 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~  145 (245)
                      ||+++++|.+++...  .+++..+..++.|++.||+|||++|++|+   |++|+||                      ++
T Consensus        95 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~---dlkp~Ni----------------------l~  149 (303)
T 1zy4_A           95 EYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHR---DLKPMNI----------------------FI  149 (303)
T ss_dssp             ECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCS---CCCGGGE----------------------EE
T ss_pred             ecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecc---cCCHHhE----------------------EE
Confidence            999999999999643  46788899999999999999999999999   9999998                      88


Q ss_pred             CCCCceEEeecCCccCCCCC--------------CCCCCcccCCCCccccccccCC-CCCcchhHHHHHHHHHHHHhCCC
Q psy3347         146 DTEGYVKIADFGLCKEGMGF--------------GDRTGTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIFEMLVGES  210 (245)
Q Consensus       146 ~~~~~~kl~Dfg~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~g~~  210 (245)
                      +.++.++|+|||++......              ........|+..|+|||.+.+. .++.++|||||||++|+|++   
T Consensus       150 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---  226 (303)
T 1zy4_A          150 DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---  226 (303)
T ss_dssp             CTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---
T ss_pred             cCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---
Confidence            88999999999998753221              1122345688899999999764 68899999999999999998   


Q ss_pred             CCCC-CCHHHHHHHHhcCcccCC----CCCChhHHhhhc
Q psy3347         211 PFPG-DDEEEVFDSIVNDEVRYP----RFLSLEAIAIMR  244 (245)
Q Consensus       211 pf~~-~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~  244 (245)
                      ||.. .+..+....+......+|    ...++.++++|+
T Consensus       227 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  265 (303)
T 1zy4_A          227 PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIR  265 (303)
T ss_dssp             CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHH
T ss_pred             ccCCchhHHHHHHhccccccccCccccccchHHHHHHHH
Confidence            5543 334455555555444443    445666777775


No 230
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=2e-34  Score=246.06  Aligned_cols=193  Identities=27%  Similarity=0.394  Sum_probs=157.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc---CCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM---RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~---~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      ||+|+++.+|+.||||+++...    .......+|.++++.++..   .|++|+++.+++...++.|+||||+++ +|.+
T Consensus        70 V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~  144 (382)
T 2vx3_A           70 VVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYD  144 (382)
T ss_dssp             EEEEEETTTTEEEEEEEECSSH----HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHH
T ss_pred             EEEEEEcCCCcEEEEEEEeccH----HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCCC-CHHH
Confidence            7999999999999999997532    2233444555555544432   234699999999999999999999965 8988


Q ss_pred             hhhh---cCCChHHHHHHHHHHHHHHHHhh--hcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc--CCCCc
Q psy3347          78 HIHA---DVFSEPRAVFYAACVVLGLQYLH--ESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN--DTEGY  150 (245)
Q Consensus        78 ~~~~---~~l~~~~~~~i~~~i~~~l~~lH--~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  150 (245)
                      ++..   ..+++..+..++.|++.||.|||  +.||+||   |+||+||                      ++  +.++.
T Consensus       145 ~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHr---Dlkp~NI----------------------ll~~~~~~~  199 (382)
T 2vx3_A          145 LLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHC---DLKPENI----------------------LLCNPKRSA  199 (382)
T ss_dssp             HHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECC---CCSGGGE----------------------EESSTTSCC
T ss_pred             HHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcC---CCCcccE----------------------EEecCCCCc
Confidence            8854   35899999999999999999999  5799999   8888888                      55  45788


Q ss_pred             eEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q psy3347         151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVN  226 (245)
Q Consensus       151 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~~  226 (245)
                      +||+|||++....   .......||+.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+..+....+..
T Consensus       200 ~kL~DFG~a~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~  272 (382)
T 2vx3_A          200 IKIVDFGSSCQLG---QRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE  272 (382)
T ss_dssp             EEECCCTTCEETT---CCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             EEEEeccCceecc---cccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            9999999997532   223456789999999999998999999999999999999999999999888877777654


No 231
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.7e-35  Score=243.97  Aligned_cols=180  Identities=23%  Similarity=0.382  Sum_probs=144.7

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC----CeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE----AHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~----~~~~lv~e~~~~~~L~   76 (245)
                      ||+|++.  |+.||+|++....      .....++.+ +.....++||||+++++++...    +..++||||+++++|.
T Consensus        53 V~~~~~~--~~~vavK~~~~~~------~~~~~~e~~-~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~  123 (337)
T 3mdy_A           53 VWMGKWR--GEKVAVKVFFTTE------EASWFRETE-IYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLY  123 (337)
T ss_dssp             EEEEEET--TEEEEEEEEEGGG------HHHHHHHHH-HHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHH
T ss_pred             EEEEEEC--CceEEEEEEeccc------cchhhhHHH-HHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHH
Confidence            7899875  8999999996431      122223322 2223345899999999999877    7899999999999999


Q ss_pred             hhhhhcCCChHHHHHHHHHHHHHHHHhhhc--------CccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCC
Q psy3347          77 MHIHADVFSEPRAVFYAACVVLGLQYLHES--------RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTE  148 (245)
Q Consensus        77 ~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (245)
                      ++++...+++..+..++.|++.||+|||++        |++||   |+||+||                      +++.+
T Consensus       124 ~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~---Dikp~Ni----------------------ll~~~  178 (337)
T 3mdy_A          124 DYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHR---DLKSKNI----------------------LVKKN  178 (337)
T ss_dssp             HHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECS---CCCGGGE----------------------EECTT
T ss_pred             HHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEec---ccchHHE----------------------EECCC
Confidence            999888899999999999999999999999        99999   9999999                      88889


Q ss_pred             CceEEeecCCccCCCCCCCC----CCcccCCCCccccccccCCCCCcc------hhHHHHHHHHHHHHhC----------
Q psy3347         149 GYVKIADFGLCKEGMGFGDR----TGTFCGTPEFLAPEVLTETSYTRA------VDWWGLGVLIFEMLVG----------  208 (245)
Q Consensus       149 ~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~------~DvwslG~~l~el~~g----------  208 (245)
                      +.+||+|||++.........    .....||..|+|||.+.+...+.+      +|||||||++|||++|          
T Consensus       179 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~  258 (337)
T 3mdy_A          179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY  258 (337)
T ss_dssp             SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred             CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccc
Confidence            99999999998643322221    224578999999999987666554      9999999999999999          


Q ss_pred             CCCCCC
Q psy3347         209 ESPFPG  214 (245)
Q Consensus       209 ~~pf~~  214 (245)
                      ..||..
T Consensus       259 ~~p~~~  264 (337)
T 3mdy_A          259 QLPYHD  264 (337)
T ss_dssp             CCTTTT
T ss_pred             cccHhh
Confidence            777754


No 232
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=2.9e-35  Score=249.91  Aligned_cols=183  Identities=25%  Similarity=0.343  Sum_probs=146.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc--------CCCceeeeeEEEeeCC----eEEEEEe
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM--------RHPFLVNLFACFQTEA----HVCFVME   68 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~--------~h~ni~~~~~~~~~~~----~~~lv~e   68 (245)
                      ||+|++..+|+.||+|++....    ...+.+.+|.+.+..+...        .||||+++++++...+    ..+++||
T Consensus        35 V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e  110 (373)
T 1q8y_A           35 VWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFE  110 (373)
T ss_dssp             EEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEEC
T ss_pred             EEEEEecCCCcEEEEEEecCCc----cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEe
Confidence            7999999999999999997532    2234455555555544422        3899999999997654    7899999


Q ss_pred             eccCCchhhhhhh---cCCChHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCHHHHHHHHHHhhhccccCcccchhccc
Q psy3347          69 YAAGGDLMMHIHA---DVFSEPRAVFYAACVVLGLQYLHES-RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTV  144 (245)
Q Consensus        69 ~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~  144 (245)
                      ++ +++|.+++..   ..+++..+..++.|++.||+|||++ ||+|+   |+||+||                      +
T Consensus       111 ~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~---Dikp~NI----------------------l  164 (373)
T 1q8y_A          111 VL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHT---DIKPENV----------------------L  164 (373)
T ss_dssp             CC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECS---CCSGGGE----------------------E
T ss_pred             cC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEec---CCChHHe----------------------E
Confidence            99 7899888853   4589999999999999999999998 99999   8888888                      4


Q ss_pred             c------CCCCceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q psy3347         145 N------DTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD  216 (245)
Q Consensus       145 ~------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~  216 (245)
                      +      +..+.+||+|||++.....   ......||..|+|||.+.+..++.++|||||||++|+|++|+.||.+.+
T Consensus       165 l~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  239 (373)
T 1q8y_A          165 MEIVDSPENLIQIKIADLGNACWYDE---HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE  239 (373)
T ss_dssp             EEEEETTTTEEEEEECCCTTCEETTB---CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             EeccCCCcCcceEEEcccccccccCC---CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence            4      3445799999999875322   2334578999999999999899999999999999999999999997653


No 233
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=1.1e-34  Score=244.28  Aligned_cols=209  Identities=18%  Similarity=0.291  Sum_probs=151.5

Q ss_pred             CEeEEEecCC-cEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc---CCCceeeeeEEEeeCCeEEEEEeeccCCchh
Q psy3347           1 VILSQYRNTG-EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM---RHPFLVNLFACFQTEAHVCFVMEYAAGGDLM   76 (245)
Q Consensus         1 V~~a~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~---~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~   76 (245)
                      ||+|++..++ +.||+|+++...    ...+.+.+|.+++..++..   .+++++.+.+++...++.++||||+++ ++.
T Consensus        35 V~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~  109 (355)
T 2eu9_A           35 VVECLDHARGKSQVALKIIRNVG----KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGK-NTF  109 (355)
T ss_dssp             EEEEEETTTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECCCC-BHH
T ss_pred             EEEEEecCCCceEEEEEEEcccc----cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEeccCC-ChH
Confidence            7999998876 799999997532    2234444554444444322   233499999999999999999999954 565


Q ss_pred             hhhh-h--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhcccc--CcccchhccccCCCCce
Q psy3347          77 MHIH-A--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKV--NSSQEIKLTVNDTEGYV  151 (245)
Q Consensus        77 ~~~~-~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  151 (245)
                      +++. .  ..+++..+..++.|++.||+|||++||+|+   |+||+||     ++...-..  ...........+.++.+
T Consensus       110 ~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~---Dlkp~NI-----ll~~~~~~~~~~~~~~~~~~~~~~~~~  181 (355)
T 2eu9_A          110 EFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHT---DLKPENI-----LFVNSEFETLYNEHKSCEEKSVKNTSI  181 (355)
T ss_dssp             HHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECC---CCCGGGE-----EESCCCEEEEECCC-CCCEEEESCCCE
T ss_pred             HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccC---CCCHHHE-----EEecccccccccccccccccccCCCcE
Confidence            5553 2  368999999999999999999999999999   8888777     22100000  00000000001457889


Q ss_pred             EEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q psy3347         152 KIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV  225 (245)
Q Consensus       152 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (245)
                      ||+|||++....   .......||..|+|||.+.+..++.++|||||||++|+|++|+.||.+.+..+....+.
T Consensus       182 kl~Dfg~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~  252 (355)
T 2eu9_A          182 RVADFGSATFDH---EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME  252 (355)
T ss_dssp             EECCCTTCEETT---SCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             EEeecCcccccc---ccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            999999987522   22345578999999999998899999999999999999999999999887766555543


No 234
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.8e-35  Score=245.39  Aligned_cols=214  Identities=23%  Similarity=0.353  Sum_probs=165.8

Q ss_pred             CEeEE----EecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC--eEEEEEeeccCCc
Q psy3347           1 VILSQ----YRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA--HVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~--~~~lv~e~~~~~~   74 (245)
                      ||+|+    +..+|+.||+|++...   .....+.+.+   +++.++.++||||+++++++...+  ..++||||+++++
T Consensus        57 V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~---E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~  130 (326)
T 2w1i_A           57 VEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS  130 (326)
T ss_dssp             EEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHH---HHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCB
T ss_pred             EEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHH---HHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCC
Confidence            68888    4668999999999764   2233344444   477788899999999999986654  7899999999999


Q ss_pred             hhhhhhh--cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceE
Q psy3347          75 LMMHIHA--DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVK  152 (245)
Q Consensus        75 L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  152 (245)
                      |.+++..  ..+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++.++
T Consensus       131 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~---dikp~NI----------------------li~~~~~~k  185 (326)
T 2w1i_A          131 LRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR---DLATRNI----------------------LVENENRVK  185 (326)
T ss_dssp             HHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECS---CCCGGGE----------------------EEEETTEEE
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEecc---CCCcceE----------------------EEcCCCcEE
Confidence            9999865  358999999999999999999999999999   8999888                      778889999


Q ss_pred             EeecCCccCCCCCCC---CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH------------
Q psy3347         153 IADFGLCKEGMGFGD---RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE------------  217 (245)
Q Consensus       153 l~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~------------  217 (245)
                      |+|||++........   ......++..|+|||.+.+..++.++||||||+++|+|++|..||.....            
T Consensus       186 L~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~  265 (326)
T 2w1i_A          186 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG  265 (326)
T ss_dssp             ECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCT
T ss_pred             EecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccch
Confidence            999999875433221   12233456779999999888899999999999999999999998753211            


Q ss_pred             ----HHHHHHHhcC-cccCCCCCChhHHhhhcC
Q psy3347         218 ----EEVFDSIVND-EVRYPRFLSLEAIAIMRR  245 (245)
Q Consensus       218 ----~~~~~~~~~~-~~~~p~~~~~~~~~li~~  245 (245)
                          ......+... ..+.|..+++++.+||++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  298 (326)
T 2w1i_A          266 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE  298 (326)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             hhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHH
Confidence                0112222222 334578899999998863


No 235
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=4.8e-35  Score=242.45  Aligned_cols=185  Identities=25%  Similarity=0.361  Sum_probs=151.8

Q ss_pred             CEeEEEecCCcEEEEEEeeccccc-chhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDII-ARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|.+  +++.||+|++...... .....+.+.+   +++.++.++||||+++++++...+..+++|||+++++|.+++
T Consensus        47 Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~---E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l  121 (307)
T 2nru_A           47 VYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQ---EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL  121 (307)
T ss_dssp             EEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHH---HHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHH
T ss_pred             EEEEEE--CCceEEEEEEecccCcchHHHHHHHHH---HHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHH
Confidence            688876  5889999999754321 2222344444   467788889999999999999999999999999999999888


Q ss_pred             h----hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEee
Q psy3347          80 H----ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIAD  155 (245)
Q Consensus        80 ~----~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  155 (245)
                      .    ...+++..+..++.|++.||.|||++|++|+   |++|+||                      +++.++.++|+|
T Consensus       122 ~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~---dlkp~Ni----------------------li~~~~~~kl~D  176 (307)
T 2nru_A          122 SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR---DIKSANI----------------------LLDEAFTAKISD  176 (307)
T ss_dssp             HTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECS---CCCGGGE----------------------EECTTCCEEECC
T ss_pred             HhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecC---CCCHHHE----------------------EEcCCCcEEEee
Confidence            5    2358999999999999999999999999999   9999998                      888899999999


Q ss_pred             cCCccCCCCCCC--CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q psy3347         156 FGLCKEGMGFGD--RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDD  216 (245)
Q Consensus       156 fg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~  216 (245)
                      ||++........  ......|+..|+|||.+.+ .++.++||||||+++|+|++|..||.+..
T Consensus       177 fg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~  238 (307)
T 2nru_A          177 FGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR  238 (307)
T ss_dssp             CTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred             cccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence            999875322211  1334568899999998865 47889999999999999999999997643


No 236
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=2e-34  Score=252.76  Aligned_cols=210  Identities=19%  Similarity=0.222  Sum_probs=162.2

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCC-CceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRH-PFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h-~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||+|++..+|+.||||++......     +.+.+|   +++++.++| +++..+..++...+..++||||+ +++|.+++
T Consensus        23 Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E---~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll   93 (483)
T 3sv0_A           23 IYLGTNIQTNEEVAIKLENVKTKH-----PQLLYE---SKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLF   93 (483)
T ss_dssp             EEEEEETTTCCEEEEEEEETTCSS-----CCHHHH---HHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHH
T ss_pred             EEEEEECCCCcEEEEEEecccccc-----HHHHHH---HHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHH
Confidence            799999999999999988754321     234444   444555655 55666666677888999999999 88999998


Q ss_pred             h--hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc---CCCCceEEe
Q psy3347          80 H--ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN---DTEGYVKIA  154 (245)
Q Consensus        80 ~--~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~kl~  154 (245)
                      .  ...+++..+..++.|++.||+|||++||+||   ||||+||                      ++   +.++.+||+
T Consensus        94 ~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHr---DIKP~NI----------------------Ll~~~~~~~~vkL~  148 (483)
T 3sv0_A           94 NFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHR---DIKPDNF----------------------LMGLGRRANQVYII  148 (483)
T ss_dssp             HHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCCGGGE----------------------EECCGGGTTCEEEC
T ss_pred             HhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeec---ccCcceE----------------------EEecCCCCCeEEEE
Confidence            6  4579999999999999999999999999999   8888888                      55   577899999


Q ss_pred             ecCCccCCCCCCC-------CCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHH
Q psy3347         155 DFGLCKEGMGFGD-------RTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDE---EEVFDSI  224 (245)
Q Consensus       155 Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~---~~~~~~~  224 (245)
                      |||+++.......       ......|+..|+|||.+.+..++.++|||||||++|+|++|+.||.+...   .+....+
T Consensus       149 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i  228 (483)
T 3sv0_A          149 DFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI  228 (483)
T ss_dssp             CCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHH
T ss_pred             eCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHH
Confidence            9999975432221       12256789999999999999999999999999999999999999976432   3333333


Q ss_pred             hcCcc-----cCCCCCChhHHhhhc
Q psy3347         225 VNDEV-----RYPRFLSLEAIAIMR  244 (245)
Q Consensus       225 ~~~~~-----~~p~~~~~~~~~li~  244 (245)
                      .....     ..+..+++++.+||+
T Consensus       229 ~~~~~~~~~~~l~~~~p~~l~~li~  253 (483)
T 3sv0_A          229 SEKKVATSIEALCRGYPTEFASYFH  253 (483)
T ss_dssp             HHHHHHSCHHHHHTTSCHHHHHHHH
T ss_pred             hhccccccHHHHhcCCcHHHHHHHH
Confidence            22211     233677888888775


No 237
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=3.4e-35  Score=245.38  Aligned_cols=182  Identities=26%  Similarity=0.341  Sum_probs=151.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++. +|+.||+|++......  .....+   .+++++++.++||||+++++++...+..++||||+++++|.+++.
T Consensus        46 V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~---~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  119 (326)
T 3uim_A           46 VYKGRLA-DGTLVAVKRLKEERTQ--GGELQF---QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR  119 (326)
T ss_dssp             EEEECCS-SSCCEEEEECCC-------CCCHH---HHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHH
T ss_pred             EEEEEec-CCCEEEEEEeccccCc--hHHHHH---HHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHH
Confidence            7899754 6999999999864321  111233   344777889999999999999999999999999999999999885


Q ss_pred             hc-----CCChHHHHHHHHHHHHHHHHhhhc---CccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceE
Q psy3347          81 AD-----VFSEPRAVFYAACVVLGLQYLHES---RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVK  152 (245)
Q Consensus        81 ~~-----~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  152 (245)
                      ..     .+++..+..++.|++.||+|||++   |++|+   |++|+||                      +++.++.++
T Consensus       120 ~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~---Dlkp~Ni----------------------l~~~~~~~k  174 (326)
T 3uim_A          120 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHR---DVKAANI----------------------LLDEEFEAV  174 (326)
T ss_dssp             CCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECC---CCSGGGE----------------------EECTTCCEE
T ss_pred             hccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeC---CCchhhE----------------------EECCCCCEE
Confidence            42     388999999999999999999999   99999   9999998                      888899999


Q ss_pred             EeecCCccCCCCC-CCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q psy3347         153 IADFGLCKEGMGF-GDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFP  213 (245)
Q Consensus       153 l~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~  213 (245)
                      |+|||++...... ........||..|+|||.+.+..++.++||||||+++|+|++|+.||.
T Consensus       175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence            9999998753222 222334568999999999988889999999999999999999999995


No 238
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=9.3e-35  Score=243.61  Aligned_cols=178  Identities=23%  Similarity=0.336  Sum_probs=142.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee-----CCeEEEEEeeccCCch
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT-----EAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~-----~~~~~lv~e~~~~~~L   75 (245)
                      ||+|++  +|+.||+|++....      ...+..+ +++..+..++||||+++++.+..     ...+++||||+++++|
T Consensus        29 Vy~~~~--~~~~vavK~~~~~~------~~~~~~e-~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L   99 (336)
T 3g2f_A           29 VYKGSL--DERPVAVKVFSFAN------RQNFINE-KNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSL   99 (336)
T ss_dssp             EEEEEE--TTEEEEEEEEEGGG------HHHHHHH-HHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBH
T ss_pred             EEEEEE--CCeEEEEEEeeccc------hhhHHHH-HHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcH
Confidence            788866  68999999997532      1222222 23344556899999999986533     2367999999999999


Q ss_pred             hhhhhhcCCChHHHHHHHHHHHHHHHHhhhc---------CccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccC
Q psy3347          76 MMHIHADVFSEPRAVFYAACVVLGLQYLHES---------RIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVND  146 (245)
Q Consensus        76 ~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---------~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~  146 (245)
                      .++++....++..+..++.|++.||+|||+.         ||+||   |+||+||                      +++
T Consensus       100 ~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~---Dikp~Ni----------------------ll~  154 (336)
T 3g2f_A          100 XKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHR---DLNSRNV----------------------LVK  154 (336)
T ss_dssp             HHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECS---SCSGGGE----------------------EEC
T ss_pred             HHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeec---ccccceE----------------------EEc
Confidence            9999888889999999999999999999999         99999   9999998                      888


Q ss_pred             CCCceEEeecCCccCCCCCC--------CCCCcccCCCCccccccccC-------CCCCcchhHHHHHHHHHHHHhCCCC
Q psy3347         147 TEGYVKIADFGLCKEGMGFG--------DRTGTFCGTPEFLAPEVLTE-------TSYTRAVDWWGLGVLIFEMLVGESP  211 (245)
Q Consensus       147 ~~~~~kl~Dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslG~~l~el~~g~~p  211 (245)
                      .++.+||+|||++.......        .......||..|+|||.+.+       ..++.++|||||||++|||++|..|
T Consensus       155 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p  234 (336)
T 3g2f_A          155 NDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTD  234 (336)
T ss_dssp             TTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGG
T ss_pred             CCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCc
Confidence            88999999999997533211        11234568999999999976       3566789999999999999998666


Q ss_pred             C
Q psy3347         212 F  212 (245)
Q Consensus       212 f  212 (245)
                      |
T Consensus       235 ~  235 (336)
T 3g2f_A          235 L  235 (336)
T ss_dssp             G
T ss_pred             C
Confidence            5


No 239
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=4.2e-34  Score=240.03  Aligned_cols=179  Identities=23%  Similarity=0.378  Sum_probs=146.6

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhh--cCCCceeeeeEEEeeCC----eEEEEEeeccCCc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANT--MRHPFLVNLFACFQTEA----HVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~--~~h~ni~~~~~~~~~~~----~~~lv~e~~~~~~   74 (245)
                      ||+|++  +|+.||+|++....      ...+.+|   .+++..  ++||||+++++++...+    ..++||||+++++
T Consensus        58 Vy~~~~--~~~~vavK~~~~~~------~~~~~~e---~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~  126 (342)
T 1b6c_B           58 VWRGKW--RGEEVAVKIFSSRE------ERSWFRE---AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGS  126 (342)
T ss_dssp             EEEEEE--TTEEEEEEEECGGG------HHHHHHH---HHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCB
T ss_pred             EEEEEE--cCccEEEEEeCchh------HHHHHHH---HHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCc
Confidence            788887  59999999997431      2334444   333433  78999999999998775    8999999999999


Q ss_pred             hhhhhhhcCCChHHHHHHHHHHHHHHHHhh--------hcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccC
Q psy3347          75 LMMHIHADVFSEPRAVFYAACVVLGLQYLH--------ESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVND  146 (245)
Q Consensus        75 L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH--------~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~  146 (245)
                      |.++++...+++..+..++.|++.||.|||        ++|++|+   |++|+||                      +++
T Consensus       127 L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~---Dlkp~NI----------------------ll~  181 (342)
T 1b6c_B          127 LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR---DLKSKNI----------------------LVK  181 (342)
T ss_dssp             HHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECS---CCSGGGE----------------------EEC
T ss_pred             HHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeC---CCCHHHE----------------------EEC
Confidence            999998888999999999999999999999        8999999   9999998                      888


Q ss_pred             CCCceEEeecCCccCCCCCCC----CCCcccCCCCccccccccCC------CCCcchhHHHHHHHHHHHHhC--------
Q psy3347         147 TEGYVKIADFGLCKEGMGFGD----RTGTFCGTPEFLAPEVLTET------SYTRAVDWWGLGVLIFEMLVG--------  208 (245)
Q Consensus       147 ~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~~l~el~~g--------  208 (245)
                      .++.+||+|||++........    ......|+..|+|||.+.+.      .++.++||||||+++|+|++|        
T Consensus       182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~  261 (342)
T 1b6c_B          182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE  261 (342)
T ss_dssp             TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred             CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence            899999999999864322221    13345789999999999765      233689999999999999999        


Q ss_pred             --CCCCCCC
Q psy3347         209 --ESPFPGD  215 (245)
Q Consensus       209 --~~pf~~~  215 (245)
                        ..||...
T Consensus       262 ~~~~p~~~~  270 (342)
T 1b6c_B          262 DYQLPYYDL  270 (342)
T ss_dssp             CCCCTTTTT
T ss_pred             ccccCcccc
Confidence              7888653


No 240
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=1.7e-33  Score=233.91  Aligned_cols=212  Identities=17%  Similarity=0.333  Sum_probs=159.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcC--CCceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMR--HPFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~--h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|.+. +|+.||+|++..... .....+.+.+|   ++.++.++  ||||+++++++..++..+++|| +.+++|.++
T Consensus        44 Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E---~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~  117 (313)
T 3cek_A           44 VFQVLNE-KKQIYAIKYVNLEEA-DNQTLDSYRNE---IAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSW  117 (313)
T ss_dssp             EEEEECT-TCCEEEEEEEECSSC-CHHHHHHHHHH---HHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHH
T ss_pred             EEEEEcC-CCcEEEEEEeccccc-cccchHHHHHH---HHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHH
Confidence            7899885 589999999976432 22334445555   55555665  5999999999999999999999 567899998


Q ss_pred             hhh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecC
Q psy3347          79 IHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFG  157 (245)
Q Consensus        79 ~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  157 (245)
                      +.. ..+++..+..++.|++.||.|||++|++|+   |++|+||                      +++ ++.+||+|||
T Consensus       118 l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~---dlkp~NI----------------------l~~-~~~~kL~Dfg  171 (313)
T 3cek_A          118 LKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS---DLKPANF----------------------LIV-DGMLKLIDFG  171 (313)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCC---CCCGGGE----------------------EEE-TTEEEECCCS
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceec---CCCcccE----------------------EEE-CCeEEEeecc
Confidence            854 578999999999999999999999999999   8888888                      554 4789999999


Q ss_pred             CccCCCCCCC--CCCcccCCCCccccccccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHH
Q psy3347         158 LCKEGMGFGD--RTGTFCGTPEFLAPEVLTE-----------TSYTRAVDWWGLGVLIFEMLVGESPFPGDD-EEEVFDS  223 (245)
Q Consensus       158 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslG~~l~el~~g~~pf~~~~-~~~~~~~  223 (245)
                      ++........  ......|+..|+|||.+.+           ..++.++||||||+++|+|++|+.||.... .......
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  251 (313)
T 3cek_A          172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA  251 (313)
T ss_dssp             SSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH
T ss_pred             ccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Confidence            9875322211  1234568899999999965           467889999999999999999999997653 3344444


Q ss_pred             HhcCc--ccCCCCCChhHHhhhc
Q psy3347         224 IVNDE--VRYPRFLSLEAIAIMR  244 (245)
Q Consensus       224 ~~~~~--~~~p~~~~~~~~~li~  244 (245)
                      +....  ..+|...++++.++|+
T Consensus       252 ~~~~~~~~~~~~~~~~~l~~li~  274 (313)
T 3cek_A          252 IIDPNHEIEFPDIPEKDLQDVLK  274 (313)
T ss_dssp             HHCTTSCCCCCCCSCHHHHHHHH
T ss_pred             HHhcccccCCcccchHHHHHHHH
Confidence            44332  3457778888888875


No 241
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=1.2e-34  Score=241.06  Aligned_cols=211  Identities=20%  Similarity=0.287  Sum_probs=164.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..   .+|+|+++..... ....+.+.+   ++..++.++||||+++++++...+..+++|||+++++|.+++.
T Consensus        49 V~~~~~~~---~~avk~~~~~~~~-~~~~~~~~~---e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~  121 (319)
T 2y4i_B           49 VYHGRWHG---EVAIRLIDIERDN-EDQLKAFKR---EVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR  121 (319)
T ss_dssp             EEEEEESS---SEEEEECCCCSCC-CCCCCCCCT---TGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTT
T ss_pred             EEEEEEcC---eEEEEEeecCCCC-HHHHHHHHH---HHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHH
Confidence            68888753   4999999764321 122223333   3667888999999999999999999999999999999999996


Q ss_pred             hc--CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          81 AD--VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        81 ~~--~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      ..  .+++..+..++.|++.||+|||++|++|+   |++|+||                      +++ ++.++|+|||+
T Consensus       122 ~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~---dlkp~NI----------------------l~~-~~~~~l~Dfg~  175 (319)
T 2y4i_B          122 DAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHK---DLKSKNV----------------------FYD-NGKVVITDFGL  175 (319)
T ss_dssp             SSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCC---CCCSTTE----------------------EEC---CCEECCCSC
T ss_pred             hcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc---CCChhhE----------------------EEe-CCCEEEeecCC
Confidence            53  58999999999999999999999999999   8888888                      665 57899999998


Q ss_pred             ccCCCC-----CCCCCCcccCCCCccccccccC---------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy3347         159 CKEGMG-----FGDRTGTFCGTPEFLAPEVLTE---------TSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSI  224 (245)
Q Consensus       159 ~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~  224 (245)
                      +.....     .........|+..|+|||.+.+         ..++.++||||||+++|+|++|+.||.+....+....+
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~  255 (319)
T 2y4i_B          176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM  255 (319)
T ss_dssp             CC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHH
T ss_pred             ccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh
Confidence            764211     1112234457889999999964         34788999999999999999999999988888777777


Q ss_pred             hcCcccC--CCCCChhHHhhhc
Q psy3347         225 VNDEVRY--PRFLSLEAIAIMR  244 (245)
Q Consensus       225 ~~~~~~~--p~~~~~~~~~li~  244 (245)
                      ..+..+.  +..+++++.++|+
T Consensus       256 ~~~~~~~~~~~~~~~~l~~li~  277 (319)
T 2y4i_B          256 GTGMKPNLSQIGMGKEISDILL  277 (319)
T ss_dssp             HTTCCCCCCCSSCCTTHHHHHH
T ss_pred             ccCCCCCCCcCCCCHHHHHHHH
Confidence            6654432  3467888888875


No 242
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=7.2e-36  Score=246.55  Aligned_cols=178  Identities=24%  Similarity=0.397  Sum_probs=132.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhh--cCCCceeeeeEEEeeCC----eEEEEEeeccCCc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANT--MRHPFLVNLFACFQTEA----HVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~--~~h~ni~~~~~~~~~~~----~~~lv~e~~~~~~   74 (245)
                      ||+|++.  |+.||+|+++...      ...+.+|   .+++..  ++||||+++++++...+    ..++||||+++++
T Consensus        19 V~~~~~~--~~~vavK~~~~~~------~~~~~~e---~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~   87 (303)
T 3gxj_A           19 VWRGKWR--GEEVAVKIFSSRE------ERSWFRE---AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGS   87 (303)
T ss_dssp             EEEC-CT--TSCEEEEECC-TT------HHHHHHH---HHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCTTCC
T ss_pred             EEEEEEc--CcceEEEEecccc------hhhHHHH---HHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccCCCC
Confidence            6888764  8999999987531      2233333   344444  78999999999998776    8999999999999


Q ss_pred             hhhhhhhcCCChHHHHHHHHHHHHHHHHhh--------hcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccC
Q psy3347          75 LMMHIHADVFSEPRAVFYAACVVLGLQYLH--------ESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVND  146 (245)
Q Consensus        75 L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH--------~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~  146 (245)
                      |.++++...+++..+..++.|++.||+|||        ++|++||   |+||+||                      +++
T Consensus        88 L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~---Dlkp~Ni----------------------l~~  142 (303)
T 3gxj_A           88 LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR---DLKSKNI----------------------LVK  142 (303)
T ss_dssp             HHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCS---CCCGGGC-----------------------CC
T ss_pred             HHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeC---cCCHHHe----------------------EEC
Confidence            999998888999999999999999999999        9999999   9999999                      888


Q ss_pred             CCCceEEeecCCccCCCCCCCC----CCcccCCCCccccccccCC------CCCcchhHHHHHHHHHHHHhC--------
Q psy3347         147 TEGYVKIADFGLCKEGMGFGDR----TGTFCGTPEFLAPEVLTET------SYTRAVDWWGLGVLIFEMLVG--------  208 (245)
Q Consensus       147 ~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~~l~el~~g--------  208 (245)
                      .++.+||+|||++.........    .....||..|+|||.+.+.      .++.++||||||+++|||++|        
T Consensus       143 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~  222 (303)
T 3gxj_A          143 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE  222 (303)
T ss_dssp             TTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-
T ss_pred             CCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccc
Confidence            8999999999998643222211    2334789999999999765      344689999999999999999        


Q ss_pred             --CCCCCC
Q psy3347         209 --ESPFPG  214 (245)
Q Consensus       209 --~~pf~~  214 (245)
                        ..||..
T Consensus       223 ~~~~p~~~  230 (303)
T 3gxj_A          223 DYQLPYYD  230 (303)
T ss_dssp             CCCCTTTT
T ss_pred             eeeccccc
Confidence              777744


No 243
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=2.3e-35  Score=247.66  Aligned_cols=212  Identities=14%  Similarity=0.117  Sum_probs=153.1

Q ss_pred             CEeEEEecCCcEEEEEEeeccccc-----chhhHHHHHHHHHHHHHHhhc------CCCceeeeeEEE------------
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDII-----ARDEVESLLSEKRIFEVANTM------RHPFLVNLFACF------------   57 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~e~~~~~~l~~~------~h~ni~~~~~~~------------   57 (245)
                      ||+|++  +|+.||+|++......     .....+.+.+|.+++..++.+      +||||+++.+++            
T Consensus        36 V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~  113 (336)
T 2vuw_A           36 VFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLK  113 (336)
T ss_dssp             EEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHH
T ss_pred             EEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHH
Confidence            799988  6899999999865321     122335556665555444422      366666666654            


Q ss_pred             -----ee-------------CCeEEEEEeeccCCchhhhhhhcCCChHHHHHHHHHHHHHHHHhh-hcCccccCCCCCCH
Q psy3347          58 -----QT-------------EAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLH-ESRIIYRPQSNITK  118 (245)
Q Consensus        58 -----~~-------------~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH-~~~i~H~~~~~i~~  118 (245)
                           ..             .+..|+||||+.+|++.+.+....+++..++.++.|++.||+||| ++||+||   |+||
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHr---DlKp  190 (336)
T 2vuw_A          114 AWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHR---DLHW  190 (336)
T ss_dssp             HHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCS---CCCG
T ss_pred             HHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCEeEC---CCCH
Confidence                 22             678999999999997766666677899999999999999999999 9999999   8888


Q ss_pred             HHHHHHHHHhhhccccCcccchhccccCCCC--------------------ceEEeecCCccCCCCCCCCCCcccCCCCc
Q psy3347         119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEG--------------------YVKIADFGLCKEGMGFGDRTGTFCGTPEF  178 (245)
Q Consensus       119 ~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y  178 (245)
                      +||                      +++.++                    .+||+|||+++....     ...+||+.|
T Consensus       191 ~NI----------------------Ll~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-----~~~~gt~~y  243 (336)
T 2vuw_A          191 GNV----------------------LLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-----GIVVFCDVS  243 (336)
T ss_dssp             GGE----------------------EEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-----TEEECCCCT
T ss_pred             HHE----------------------EEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-----CcEEEeecc
Confidence            888                      555554                    899999999985322     245789999


Q ss_pred             cccccccCCCCCcchhHHHHHHH-HHHHHhCCCCCCCCCH-HHHHHHHhcC---cccC----CCCCChhHHhhhcC
Q psy3347         179 LAPEVLTETSYTRAVDWWGLGVL-IFEMLVGESPFPGDDE-EEVFDSIVND---EVRY----PRFLSLEAIAIMRR  245 (245)
Q Consensus       179 ~aPE~~~~~~~~~~~DvwslG~~-l~el~~g~~pf~~~~~-~~~~~~~~~~---~~~~----p~~~~~~~~~li~~  245 (245)
                      +|||.+.+.. +.++|||||+++ .+++++|..||.+... ......+...   ....    +..+++++++||++
T Consensus       244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~  318 (336)
T 2vuw_A          244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRT  318 (336)
T ss_dssp             TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHH
T ss_pred             cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHH
Confidence            9999998766 889999998877 6778889999854211 1122232211   1111    23467888888863


No 244
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=6.8e-34  Score=233.90  Aligned_cols=189  Identities=15%  Similarity=0.152  Sum_probs=150.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+|++..+|+.||+|++........+..+.+.+|   ++.++.++||||+++++++..++..|+||||+++++|.++++
T Consensus        47 Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e---~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~  123 (286)
T 3uqc_A           47 FWQALDTALDRQVALTFVDPQGVLPDDVLQETLSR---TLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVAD  123 (286)
T ss_dssp             EEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHH---HHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHT
T ss_pred             EEEEEecCCCceEEEEEECcccccCHHHHHHHHHH---HHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHh
Confidence            79999999999999999987644334444445444   666788999999999999999999999999999999999997


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCcc
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK  160 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~  160 (245)
                      .+. ....+.+++.|++.||+|||++||+||   |+||+||                      +++.+|.++|+++|   
T Consensus       124 ~~~-~~~~~~~i~~ql~~aL~~lH~~givH~---Dikp~NI----------------------ll~~~g~~kl~~~~---  174 (286)
T 3uqc_A          124 TSP-SPVGAIRAMQSLAAAADAAHRAGVALS---IDHPSRV----------------------RVSIDGDVVLAYPA---  174 (286)
T ss_dssp             TCC-CHHHHHHHHHHHHHHHHHHHHTTCCCC---CCSGGGE----------------------EEETTSCEEECSCC---
T ss_pred             cCC-ChHHHHHHHHHHHHHHHHHHHCCCccC---CCCcccE----------------------EEcCCCCEEEEecc---
Confidence            654 556788999999999999999999999   9999998                      78888999988543   


Q ss_pred             CCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHhcCccc----CCC
Q psy3347         161 EGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFD---SIVNDEVR----YPR  233 (245)
Q Consensus       161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~---~~~~~~~~----~p~  233 (245)
                                       |++       +++.++|||||||++|+|++|+.||.+.+..+...   ........    .+.
T Consensus       175 -----------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T 3uqc_A          175 -----------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDR  230 (286)
T ss_dssp             -----------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCT
T ss_pred             -----------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhccc
Confidence                             222       37889999999999999999999998765433211   11122222    236


Q ss_pred             CCChhHHhhhcC
Q psy3347         234 FLSLEAIAIMRR  245 (245)
Q Consensus       234 ~~~~~~~~li~~  245 (245)
                      .+++++++||++
T Consensus       231 ~~~~~l~~li~~  242 (286)
T 3uqc_A          231 DIPFQISAVAAR  242 (286)
T ss_dssp             TSCHHHHHHHHH
T ss_pred             CCCHHHHHHHHH
Confidence            788999988863


No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.1e-33  Score=243.53  Aligned_cols=180  Identities=21%  Similarity=0.288  Sum_probs=137.6

Q ss_pred             EEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhhhc-
Q psy3347           5 QYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHAD-   82 (245)
Q Consensus         5 ~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-   82 (245)
                      +...+|+.||||++......      ..   .+++++++.+ +||||+++++++.+.+..|+||||++ ++|.+++... 
T Consensus        43 ~~~~~~~~vAvK~~~~~~~~------~~---~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~  112 (432)
T 3p23_A           43 RGMFDNRDVAVKRILPECFS------FA---DREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKD  112 (432)
T ss_dssp             EEESSSSEEEEEEECTTTEE------EC---HHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSS
T ss_pred             EEEeCCeEEEEEEECHHHHH------HH---HHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcC
Confidence            45568999999999754321      12   2335667777 79999999999999999999999996 4999888654 


Q ss_pred             -CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc-----CCCCceEEeec
Q psy3347          83 -VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN-----DTEGYVKIADF  156 (245)
Q Consensus        83 -~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~kl~Df  156 (245)
                       ..++..+..++.|++.||+|||++||+||   |+||+||                      ++     +....++|+||
T Consensus       113 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr---DlKp~NI----------------------ll~~~~~~~~~~~kL~DF  167 (432)
T 3p23_A          113 FAHLGLEPITLLQQTTSGLAHLHSLNIVHR---DLKPHNI----------------------LISMPNAHGKIKAMISDF  167 (432)
T ss_dssp             CCCCSSCHHHHHHHHHHHHHHHHHTTCCCC---CCSTTSE----------------------EECCCBTTTBCCEEECCT
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHCcCEeC---CCCHHHE----------------------EEecCCCCCceeEEEecc
Confidence             35556778999999999999999999999   8888887                      44     23346889999


Q ss_pred             CCccCCCCCC---CCCCcccCCCCccccccccC---CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHH
Q psy3347         157 GLCKEGMGFG---DRTGTFCGTPEFLAPEVLTE---TSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEE  219 (245)
Q Consensus       157 g~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~  219 (245)
                      |+++......   .......||+.|+|||.+.+   ..++.++|||||||++|+|++ |..||.......
T Consensus       168 G~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~  237 (432)
T 3p23_A          168 GLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ  237 (432)
T ss_dssp             TEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH
T ss_pred             cceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH
Confidence            9987543221   12345678999999999973   567789999999999999999 999996554433


No 246
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=5.7e-33  Score=240.96  Aligned_cols=219  Identities=22%  Similarity=0.333  Sum_probs=146.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHI   79 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   79 (245)
                      ||.+ ...+|+.||||++....      .+...+|   +++++.+ +||||+++++++..++..++||||++ ++|.+++
T Consensus        31 V~~~-~~~~g~~vAvK~~~~~~------~~~~~~E---~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l   99 (434)
T 2rio_A           31 VVFQ-GSFQGRPVAVKRMLIDF------CDIALME---IKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLV   99 (434)
T ss_dssp             EEEE-EESSSSEEEEEEEEGGG------HHHHHHH---HHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHH
T ss_pred             EEEE-EEECCeEEEEEEEcHHH------HHHHHHH---HHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHH
Confidence            4543 55689999999987532      1233334   5556554 89999999999999999999999996 5999998


Q ss_pred             hhcCC--------ChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCce
Q psy3347          80 HADVF--------SEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYV  151 (245)
Q Consensus        80 ~~~~l--------~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (245)
                      .....        ++..+..++.|++.||+|||++||+||   |+||+||     ++...-..    .......+.++.+
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr---DLkp~NI-----Ll~~~~~~----~~~~~~~~~~~~~  167 (434)
T 2rio_A          100 ESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHR---DLKPQNI-----LVSTSSRF----TADQQTGAENLRI  167 (434)
T ss_dssp             HTC------------CCHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE-----EEECCHHH----HSCCTTCCCSCEE
T ss_pred             hccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCcccc---CCChHhE-----EEecCccc----ccccccCCCceEE
Confidence            65422        233457899999999999999999999   8888777     22100000    0000001234689


Q ss_pred             EEeecCCccCCCCCCC----CCCcccCCCCccccccccC-------CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHH
Q psy3347         152 KIADFGLCKEGMGFGD----RTGTFCGTPEFLAPEVLTE-------TSYTRAVDWWGLGVLIFEMLV-GESPFPGDDEEE  219 (245)
Q Consensus       152 kl~Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslG~~l~el~~-g~~pf~~~~~~~  219 (245)
                      ||+|||++........    ......||+.|+|||.+.+       ..++.++|||||||++|+|++ |+.||.+....+
T Consensus       168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~  247 (434)
T 2rio_A          168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE  247 (434)
T ss_dssp             EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred             EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence            9999999975432221    1234578999999999965       568899999999999999999 999997654333


Q ss_pred             HHHHHhcCcccCC-------CCCChhHHhhhc
Q psy3347         220 VFDSIVNDEVRYP-------RFLSLEAIAIMR  244 (245)
Q Consensus       220 ~~~~~~~~~~~~p-------~~~~~~~~~li~  244 (245)
                        ..+..+....+       ..+++++++||+
T Consensus       248 --~~i~~~~~~~~~~~~~~~~~~~~~~~~li~  277 (434)
T 2rio_A          248 --SNIIRGIFSLDEMKCLHDRSLIAEATDLIS  277 (434)
T ss_dssp             --HHHHHTCCCCCCCTTCCCHHHHHHHHHHHH
T ss_pred             --HHHhcCCCCcccccccccccchHHHHHHHH
Confidence              23333322221       123467777775


No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=6.1e-34  Score=256.16  Aligned_cols=184  Identities=32%  Similarity=0.456  Sum_probs=153.4

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEee------CCeEEEEEeeccCCc
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQT------EAHVCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~------~~~~~lv~e~~~~~~   74 (245)
                      ||+|.+..+|+.||+|++....  .....+.+.+   ++++++.++||||+++++++..      ++..++||||+++++
T Consensus        30 Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~---Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggs  104 (676)
T 3qa8_A           30 VLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCL---EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGD  104 (676)
T ss_dssp             CCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHH---HHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCB
T ss_pred             EEEEEECCCCcEEEEEEecccC--CHHHHHHHHH---HHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCC
Confidence            7999999999999999987542  2233344444   4677888899999999999765      667899999999999


Q ss_pred             hhhhhhhc----CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCC-
Q psy3347          75 LMMHIHAD----VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEG-  149 (245)
Q Consensus        75 L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~-  149 (245)
                      |.+++...    .+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.++ 
T Consensus       105 L~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHr---DLKP~NI----------------------Ll~~~g~  159 (676)
T 3qa8_A          105 LRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHR---DLKPENI----------------------VLQPGPQ  159 (676)
T ss_dssp             HHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCC---CCCSTTE----------------------EEECCSS
T ss_pred             HHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC---CCCHHHe----------------------EeecCCC
Confidence            99998642    58899999999999999999999999999   8888888                      565444 


Q ss_pred             --ceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q psy3347         150 --YVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGD  215 (245)
Q Consensus       150 --~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~  215 (245)
                        .++|+|||++..... ........|+..|+|||.+.+..++.++||||||+++|+|++|..||.+.
T Consensus       160 ~~~vKL~DFG~a~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~  226 (676)
T 3qa8_A          160 RLIHKIIDLGYAKELDQ-GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN  226 (676)
T ss_dssp             SCEEEECSCCCCCBTTS-CCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ceeEEEccccccccccc-ccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcc
Confidence              489999999875322 22344567899999999999889999999999999999999999999764


No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=1.2e-32  Score=227.51  Aligned_cols=186  Identities=26%  Similarity=0.474  Sum_probs=144.3

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHH-hhcCCCceeeeeEEEee----CCeEEEEEeeccCCch
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVA-NTMRHPFLVNLFACFQT----EAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~h~ni~~~~~~~~~----~~~~~lv~e~~~~~~L   75 (245)
                      ||+|.++.+|+.||+|++...        ....+|   ++.+ +..+||||+++++++..    .+..++||||+++++|
T Consensus        34 V~~~~~~~~~~~vaiK~~~~~--------~~~~~e---~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L  102 (299)
T 3m2w_A           34 VLQIFNKRTQEKFALKMLQDC--------PKARRE---VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGEL  102 (299)
T ss_dssp             EEEEEETTTCCEEEEEEEECS--------HHHHHH---HHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBH
T ss_pred             EEEEEEcCCCcEEEEEEeccc--------HHHHHH---HHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcH
Confidence            799999999999999999743        222333   3333 55689999999999977    6789999999999999


Q ss_pred             hhhhhhc---CCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCC---CC
Q psy3347          76 MMHIHAD---VFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDT---EG  149 (245)
Q Consensus        76 ~~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~---~~  149 (245)
                      .+++...   .+++..+..++.|++.||+|||++|++|+   |++|+||                      +++.   ++
T Consensus       103 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~---dlkp~Ni----------------------l~~~~~~~~  157 (299)
T 3m2w_A          103 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHR---DVKPENL----------------------LYTSKRPNA  157 (299)
T ss_dssp             HHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EESSSSTTC
T ss_pred             HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC---CCCHHHE----------------------EEecCCCCC
Confidence            9998643   58999999999999999999999999999   8888888                      6665   78


Q ss_pred             ceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh----
Q psy3347         150 YVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIV----  225 (245)
Q Consensus       150 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~~~~~~~~~~~~----  225 (245)
                      .++|+|||++...                      .+..++.++|||||||++|+|++|+.||.+.........+.    
T Consensus       158 ~~kl~Dfg~a~~~----------------------~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~  215 (299)
T 3m2w_A          158 ILKLTDFGFAKET----------------------TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR  215 (299)
T ss_dssp             CEEECCCTTCEEC----------------------TTCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSC
T ss_pred             cEEEecccccccc----------------------ccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHh
Confidence            8999999988632                      12457789999999999999999999997765544332222    


Q ss_pred             cCcccCC----CCCChhHHhhhc
Q psy3347         226 NDEVRYP----RFLSLEAIAIMR  244 (245)
Q Consensus       226 ~~~~~~p----~~~~~~~~~li~  244 (245)
                      .....+|    ..+++++++||+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~li~  238 (299)
T 3m2w_A          216 MGQYEFPNPEWSEVSEEVKMLIR  238 (299)
T ss_dssp             TTCCSSCHHHHTTSCHHHHHHHH
T ss_pred             hccccCCchhcccCCHHHHHHHH
Confidence            2222333    568888888875


No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=4.3e-33  Score=254.13  Aligned_cols=177  Identities=24%  Similarity=0.390  Sum_probs=144.7

Q ss_pred             CEeEEEec-CCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCe-----EEEEEeeccCCc
Q psy3347           1 VILSQYRN-TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAH-----VCFVMEYAAGGD   74 (245)
Q Consensus         1 V~~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~-----~~lv~e~~~~~~   74 (245)
                      ||+|.+.. +|+.||||++....  .....+.+.   ++++.++.++||||+++++++...+.     .|+||||+++++
T Consensus        96 Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~---~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~  170 (681)
T 2pzi_A           96 IYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAM---AERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQS  170 (681)
T ss_dssp             EEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHH---HHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEE
T ss_pred             EEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHH---HHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCc
Confidence            79999987 79999999987532  222333343   44677889999999999999987654     799999999999


Q ss_pred             hhhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEe
Q psy3347          75 LMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIA  154 (245)
Q Consensus        75 L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  154 (245)
                      |.+++.. .+++..+..++.|++.||.|||++||+||   |+||+||                      +++.+ .+||+
T Consensus       171 L~~~~~~-~l~~~~~~~~~~qi~~aL~~lH~~giiHr---Dlkp~NI----------------------ll~~~-~~kl~  223 (681)
T 2pzi_A          171 LKRSKGQ-KLPVAEAIAYLLEILPALSYLHSIGLVYN---DLKPENI----------------------MLTEE-QLKLI  223 (681)
T ss_dssp             CC----C-CCCHHHHHHHHHHHHHHHHHHHHTTEECC---CCSGGGE----------------------EECSS-CEEEC
T ss_pred             HHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCCeec---ccChHHe----------------------EEeCC-cEEEE
Confidence            9988765 79999999999999999999999999999   8999888                      66654 89999


Q ss_pred             ecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q psy3347         155 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPG  214 (245)
Q Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g~~pf~~  214 (245)
                      |||+++.....    ....||+.|+|||++.+.. +.++|||||||++|+|++|..||.+
T Consensus       224 DFG~a~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~  278 (681)
T 2pzi_A          224 DLGAVSRINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNG  278 (681)
T ss_dssp             CCTTCEETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred             ecccchhcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcc
Confidence            99998753222    4557899999999997654 8899999999999999999998854


No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=2.2e-33  Score=242.09  Aligned_cols=207  Identities=17%  Similarity=0.151  Sum_probs=147.7

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCC-Cc---------eeeeeEE------------Ee
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRH-PF---------LVNLFAC------------FQ   58 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h-~n---------i~~~~~~------------~~   58 (245)
                      ||+|++..+|+.||||++...........+.+.+|   +..++.+.| +|         ++...+.            +.
T Consensus        94 Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (413)
T 3dzo_A           94 YLEATDQETGESFEVHVPYFTERPPSNAIKQMKEE---VLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRL  170 (413)
T ss_dssp             EEEEEETTTCCEEEEEEECCSCC----CCHHHHHH---HHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------
T ss_pred             EEEEEecCCCCceEEEEEecCCCccHHHHHHHHHH---HHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccC
Confidence            79999999999999999885433333334455554   445555555 11         1111111            11


Q ss_pred             e-----CCeEEEEEeeccCCchhhhhh--------hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHH
Q psy3347          59 T-----EAHVCFVMEYAAGGDLMMHIH--------ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIE  125 (245)
Q Consensus        59 ~-----~~~~~lv~e~~~~~~L~~~~~--------~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~  125 (245)
                      .     ....+++|+.+ +++|.++++        ...+++..+..++.|++.||+|||++||+||   ||||+||    
T Consensus       171 ~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr---DiKp~NI----  242 (413)
T 3dzo_A          171 DERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT---YLRPVDI----  242 (413)
T ss_dssp             ------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS---CCCGGGE----
T ss_pred             CCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC---CcccceE----
Confidence            1     12467888865 568887774        2346777888999999999999999999999   9999999    


Q ss_pred             HHhhhccccCcccchhccccCCCCceEEeecCCccCCCCCCCCCCcccCCCCccccccc----------cCCCCCcchhH
Q psy3347         126 AKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL----------TETSYTRAVDW  195 (245)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~Dv  195 (245)
                                        +++.++.+||+|||+++.....   ....+| ..|+|||.+          .+..++.++||
T Consensus       243 ------------------Ll~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dv  300 (413)
T 3dzo_A          243 ------------------VLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDT  300 (413)
T ss_dssp             ------------------EECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHH
T ss_pred             ------------------EEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhH
Confidence                              8889999999999998753222   344567 899999999          45567889999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCcccCCCCCChhHHhhhc
Q psy3347         196 WGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAIMR  244 (245)
Q Consensus       196 wslG~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~  244 (245)
                      |||||++|+|++|+.||.+.+..+....+....    ..+++++++||+
T Consensus       301 wSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~----~~~~~~~~~li~  345 (413)
T 3dzo_A          301 WTLGLAIYWIWCADLPNTDDAALGGSEWIFRSC----KNIPQPVRALLE  345 (413)
T ss_dssp             HHHHHHHHHHHHSSCCCCTTGGGSCSGGGGSSC----CCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCcchhhhHHHHHhhc----ccCCHHHHHHHH
Confidence            999999999999999998765544333333322    356778888775


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97  E-value=1.7e-32  Score=244.87  Aligned_cols=177  Identities=12%  Similarity=0.030  Sum_probs=127.9

Q ss_pred             eEEEecCCcEEEEEEeecccccc----hhhHHHHHHHHHHHHHHhhc-CCCceeeeeEEEeeCCeEEEEEeeccCCchhh
Q psy3347           3 LSQYRNTGEYFAIKALKKGDIIA----RDEVESLLSEKRIFEVANTM-RHPFLVNLFACFQTEAHVCFVMEYAAGGDLMM   77 (245)
Q Consensus         3 ~a~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~e~~~~~~l~~~-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~   77 (245)
                      .++...+|+.||+|++.+.....    .....+.....++++.|+++ .|+||+++++++++++..||||||++|++|.+
T Consensus       252 ~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d  331 (569)
T 4azs_A          252 RSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSD  331 (569)
T ss_dssp             CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHH
T ss_pred             ccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHH
Confidence            34566689999999997643211    12223333445568888888 69999999999999999999999999999999


Q ss_pred             hhhh-cCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeec
Q psy3347          78 HIHA-DVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADF  156 (245)
Q Consensus        78 ~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df  156 (245)
                      .+.. +++++   .+|+.||+.||+|+|++||+||   ||||+||                      +++.+|.+||+||
T Consensus       332 ~i~~~~~l~~---~~I~~QIl~AL~ylH~~GIIHR---DIKPeNI----------------------LL~~dg~vKL~DF  383 (569)
T 4azs_A          332 MLAAGEEIDR---EKILGSLLRSLAALEKQGFWHD---DVRPWNV----------------------MVDARQHARLIDF  383 (569)
T ss_dssp             HHHTTCCCCH---HHHHHHHHHHHHHHHHTTCEES---CCCGGGE----------------------EECTTSCEEECCC
T ss_pred             HHHhCCCCCH---HHHHHHHHHHHHHHHHCCceec---cCchHhE----------------------EECCCCCEEEeec
Confidence            9965 45665   3589999999999999999999   9999999                      8899999999999


Q ss_pred             CCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHhC
Q psy3347         157 GLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVG  208 (245)
Q Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~g  208 (245)
                      |+++............+||+.|+|||++.+. +..++|+||+|++++++.++
T Consensus       384 GlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          384 GSIVTTPQDCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             TTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTT
T ss_pred             ccCeeCCCCCccccCceechhhccHHHhCCC-CCCcccccccccchhhhccc
Confidence            9998655554555677899999999999764 56789999999988776544


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91  E-value=1.5e-25  Score=199.02  Aligned_cols=177  Identities=15%  Similarity=0.070  Sum_probs=136.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchh--hHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARD--EVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMH   78 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~   78 (245)
                      ||+|  ...++.+|+|+..........  ......+..++++++++++||||+++..++...+..|+||||+++++|.++
T Consensus       352 Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~  429 (540)
T 3en9_A          352 IKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDV  429 (540)
T ss_dssp             EEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHH
T ss_pred             EEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHH
Confidence            6888  445889999987653322211  111122335557788888999999666666677778999999999999998


Q ss_pred             hhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCC
Q psy3347          79 IHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGL  158 (245)
Q Consensus        79 ~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  158 (245)
                      ++.       +..++.|++.||+|||++||+||   |+||+||                      +++.  .+||+|||+
T Consensus       430 l~~-------~~~i~~qi~~aL~~LH~~gIiHr---DiKp~NI----------------------Ll~~--~~kL~DFGl  475 (540)
T 3en9_A          430 IED-------NLDIAYKIGEIVGKLHKNDVIHN---DLTTSNF----------------------IFDK--DLYIIDFGL  475 (540)
T ss_dssp             STT-------CTHHHHHHHHHHHHHHHTTEECT---TCCTTSE----------------------EESS--SEEECCCTT
T ss_pred             HHH-------HHHHHHHHHHHHHHHHHCcCccC---CCCHHHE----------------------EECC--eEEEEECcc
Confidence            865       56899999999999999999999   8888888                      6666  899999999


Q ss_pred             ccCCCCCCCC-------CCcccCCCCccccccccC--CCCCcchhHHHHHHHHHHHHhCCCCCC
Q psy3347         159 CKEGMGFGDR-------TGTFCGTPEFLAPEVLTE--TSYTRAVDWWGLGVLIFEMLVGESPFP  213 (245)
Q Consensus       159 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~~g~~pf~  213 (245)
                      ++........       ....+||+.|+|||.+..  ..|+..+|+||.++-..+.+.++.+|.
T Consensus       476 a~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          476 GKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             CEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             CEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            9864332111       135678999999999976  567788899999999988888877764


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84  E-value=2.1e-21  Score=159.01  Aligned_cols=132  Identities=14%  Similarity=0.071  Sum_probs=98.8

Q ss_pred             CEeEEEecCCcEEEEEEeecccccch---------------hhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEE
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIAR---------------DEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCF   65 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~---------------~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~l   65 (245)
                      ||+|++ .+|+.||+|+++.......               .....+.   ++++.++.++  | +++.+++.. +..++
T Consensus       106 Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~---~E~~~l~~l~--~-~~v~~~~~~-~~~~l  177 (282)
T 1zar_A          106 VFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSAR---NEFRALQKLQ--G-LAVPKVYAW-EGNAV  177 (282)
T ss_dssp             EEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHH---HHHHHHHHTT--T-SSSCCEEEE-ETTEE
T ss_pred             EEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHH---HHHHHHHhcc--C-CCcCeEEec-cceEE
Confidence            799999 8899999999975321111               1123344   4466677776  5 667776644 45699


Q ss_pred             EEeeccCCchhhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhcccc
Q psy3347          66 VMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVN  145 (245)
Q Consensus        66 v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~  145 (245)
                      ||||++|++|.+ +.     ...+..++.|++.||.|||++|++||   |+||+||                      ++
T Consensus       178 vmE~~~g~~L~~-l~-----~~~~~~i~~qi~~~l~~lH~~giiHr---Dlkp~NI----------------------Ll  226 (282)
T 1zar_A          178 LMELIDAKELYR-VR-----VENPDEVLDMILEEVAKFYHRGIVHG---DLSQYNV----------------------LV  226 (282)
T ss_dssp             EEECCCCEEGGG-CC-----CSCHHHHHHHHHHHHHHHHHTTEECS---CCSTTSE----------------------EE
T ss_pred             EEEecCCCcHHH-cc-----hhhHHHHHHHHHHHHHHHHHCCCEeC---CCCHHHE----------------------EE
Confidence            999999999987 32     23456799999999999999999999   9999999                      77


Q ss_pred             CCCCceEEeecCCccCCCCCCCCCCcccCCCCcccccccc
Q psy3347         146 DTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLT  185 (245)
Q Consensus       146 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  185 (245)
                      + ++.++|+|||+++.             +..++|||.+.
T Consensus       227 ~-~~~vkl~DFG~a~~-------------~~~~~a~e~l~  252 (282)
T 1zar_A          227 S-EEGIWIIDFPQSVE-------------VGEEGWREILE  252 (282)
T ss_dssp             E-TTEEEECCCTTCEE-------------TTSTTHHHHHH
T ss_pred             E-CCcEEEEECCCCeE-------------CCCCCHHHHHH
Confidence            7 89999999999863             33478898884


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.64  E-value=1.6e-16  Score=128.36  Aligned_cols=125  Identities=14%  Similarity=0.076  Sum_probs=86.3

Q ss_pred             CEeEEEecCCcE--EEEEEeecccccch---------------------hhHHHHHHHHHHHHHHhhcCCCce--eeeeE
Q psy3347           1 VILSQYRNTGEY--FAIKALKKGDIIAR---------------------DEVESLLSEKRIFEVANTMRHPFL--VNLFA   55 (245)
Q Consensus         1 V~~a~~~~~~~~--vaiK~~~~~~~~~~---------------------~~~~~~~~e~~~~~~l~~~~h~ni--~~~~~   55 (245)
                      ||+|.+..+|+.  ||||+++.......                     .....+.+   ++..++.+.|+++  ..+++
T Consensus        63 Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---E~~~l~~l~~~~i~~p~~~~  139 (258)
T 1zth_A           63 VFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEK---EFRNLERAKEAGVSVPQPYT  139 (258)
T ss_dssp             EEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHH---HHHHHHHHHHTTCCCCCEEE
T ss_pred             EEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHH---HHHHHHHHHhCCCCCCeEEE
Confidence            799999888999  99999865321100                     00113333   4555666666653  33333


Q ss_pred             EEeeCCeEEEEEeeccC-C----chhhhhhhcCCChHHHHHHHHHHHHHHHHhh-hcCccccCCCCCCHHHHHHHHHHhh
Q psy3347          56 CFQTEAHVCFVMEYAAG-G----DLMMHIHADVFSEPRAVFYAACVVLGLQYLH-ESRIIYRPQSNITKEEIKRIEAKVQ  129 (245)
Q Consensus        56 ~~~~~~~~~lv~e~~~~-~----~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH-~~~i~H~~~~~i~~~~ik~~~~~~~  129 (245)
                      .    +..++||||+++ |    +|.+....  .++..+..++.|++.||.||| ++||+||   |++|+||        
T Consensus       140 ~----~~~~lVmE~~g~~g~~~~~L~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~givHr---Dlkp~NI--------  202 (258)
T 1zth_A          140 Y----MKNVLLMEFIGEDELPAPTLVELGRE--LKELDVEGIFNDVVENVKRLYQEAELVHA---DLSEYNI--------  202 (258)
T ss_dssp             E----ETTEEEEECCEETTEECCBHHHHGGG--GGGSCHHHHHHHHHHHHHHHHHTSCEECS---SCSTTSE--------
T ss_pred             c----CCCEEEEEecCCCCCccccHHHHhhc--cChHHHHHHHHHHHHHHHHHHHHCCEEeC---CCCHHHE--------
Confidence            2    356899999953 4    55554322  235577899999999999999 9999999   8888888        


Q ss_pred             hccccCcccchhccccCCCCceEEeecCCccC
Q psy3347         130 ENYKVNSSQEIKLTVNDTEGYVKIADFGLCKE  161 (245)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~  161 (245)
                                    +++.  .++|+|||++..
T Consensus       203 --------------Ll~~--~~~liDFG~a~~  218 (258)
T 1zth_A          203 --------------MYID--KVYFIDMGQAVT  218 (258)
T ss_dssp             --------------EESS--SEEECCCTTCEE
T ss_pred             --------------EEcC--cEEEEECccccc
Confidence                          6666  799999999864


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.37  E-value=7.2e-13  Score=112.11  Aligned_cols=128  Identities=13%  Similarity=0.084  Sum_probs=80.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccch-----------hhHHHHHH-----HHHHHHHHhhcCCCceeeeeEEEeeCCeEE
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIAR-----------DEVESLLS-----EKRIFEVANTMRHPFLVNLFACFQTEAHVC   64 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~-----e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~   64 (245)
                      ||+|.+. +|+.||||+++.......           ....+...     ..++...|.++.+.++ +....+.... .+
T Consensus       111 VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv-~vp~p~~~~~-~~  187 (397)
T 4gyi_A          111 IMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF-PVPEPIAQSR-HT  187 (397)
T ss_dssp             EEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC-SCCCEEEEET-TE
T ss_pred             EEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC-CCCeeeeccC-ce
Confidence            7999885 699999999875321100           00011111     1122333444433222 1111121122 27


Q ss_pred             EEEeeccCCchhhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccc
Q psy3347          65 FVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTV  144 (245)
Q Consensus        65 lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~  144 (245)
                      +||||++|++|.....     .+.+..++.|++.+|.+||++||+||   |+||.||                      +
T Consensus       188 LVME~i~G~~L~~l~~-----~~~~~~l~~qll~~l~~lH~~gIVHr---DLKp~NI----------------------L  237 (397)
T 4gyi_A          188 IVMSLVDALPMRQVSS-----VPDPASLYADLIALILRLAKHGLIHG---DFNEFNI----------------------L  237 (397)
T ss_dssp             EEEECCSCEEGGGCCC-----CSCHHHHHHHHHHHHHHHHHTTEECS---CCSTTSE----------------------E
T ss_pred             EEEEecCCccHhhhcc-----cHHHHHHHHHHHHHHHHHHHCCCcCC---CCCHHHE----------------------E
Confidence            9999999988865432     23457789999999999999999999   8888888                      5


Q ss_pred             cCCCC----------ceEEeecCCccC
Q psy3347         145 NDTEG----------YVKIADFGLCKE  161 (245)
Q Consensus       145 ~~~~~----------~~kl~Dfg~~~~  161 (245)
                      ++.+|          .+.|+||+-+..
T Consensus       238 l~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          238 IREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             EEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             EeCCCCcccccccccceEEEEeCCccc
Confidence            55544          388999997653


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.94  E-value=3e-09  Score=85.38  Aligned_cols=94  Identities=11%  Similarity=-0.020  Sum_probs=67.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||++..  .|+.+++|+......   .....+.+|.+.++.+..  +..+.++++++...+..++|||+++|.+|.....
T Consensus        30 v~~~~~--~~~~~vlK~~~~~~~---~~~~~~~~E~~~l~~l~~--~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~  102 (263)
T 3tm0_A           30 VYKLVG--ENENLYLKMTDSRYK---GTTYDVEREKDMMLWLEG--KLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE  102 (263)
T ss_dssp             EEEEEC--SSCEEEEEEECGGGT---TSTTCHHHHHHHHHHHTT--TSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC
T ss_pred             EEEEEC--CCCcEEEEeCCcccC---CCHHHHHHHHHHHHHHhc--CCCCCeEEEEEecCCceEEEEEecCCeehhhccC
Confidence            466643  378999999875311   112345566555555543  6778899999999999999999999999876531


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhh
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHE  105 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~  105 (245)
                          +......++.+++.+|..||+
T Consensus       103 ----~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A          103 ----DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             ----TTTCHHHHHHHHHHHHHHHHH
T ss_pred             ----CcccHHHHHHHHHHHHHHHhC
Confidence                223345788899999999998


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.74  E-value=3.2e-08  Score=78.83  Aligned_cols=92  Identities=12%  Similarity=0.087  Sum_probs=59.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||++.. .+|+.+++|+....      ....+.+|.+.++.+... .-.+.++++++..++..+++||+++|.++.  . 
T Consensus        36 v~~~~~-~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~-~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~-  104 (264)
T 1nd4_A           36 VFRLSA-QGRPVLFVKTDLSG------ALNELQDEAARLSWLATT-GVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S-  104 (264)
T ss_dssp             EEEEEC-TTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTT-TCCBCCEEEEEECSSCEEEEEECCSSEETT--T-
T ss_pred             EEEEec-CCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhC-CCCCCeEEEeccCCCCCEEEEEecCCcccC--c-
Confidence            466643 45778999987643      113345555555555432 123566888888888899999999998884  1 


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhhcC
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHESR  107 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~~~  107 (245)
                       ....   ...++.+++..|..+|+..
T Consensus       105 -~~~~---~~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A          105 -SHLA---PAEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             -SCCC---HHHHHHHHHHHHHHHTTSC
T ss_pred             -CcCC---HhHHHHHHHHHHHHHhCCC
Confidence             1111   2356777788888888643


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.58  E-value=2.5e-07  Score=77.65  Aligned_cols=99  Identities=13%  Similarity=0.181  Sum_probs=64.7

Q ss_pred             CEeEEEecCCcEEEEEEee--cccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC---CeEEEEEeeccCCch
Q psy3347           1 VILSQYRNTGEYFAIKALK--KGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE---AHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~--~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~---~~~~lv~e~~~~~~L   75 (245)
                      ||+....  +..+++|+..  ....  ......+.+|.+.+..+.. .+..+.+++.++.+.   +..++|||+++|..+
T Consensus        54 ~y~v~~~--~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~-~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l  128 (359)
T 3dxp_A           54 TFKLVTP--GQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAG-TDVPVAKMYALCEDESVIGRAFYIMEFVSGRVL  128 (359)
T ss_dssp             EEEEECS--SCEEEEECCCC------------CHHHHHHHHHHHTT-SSSCCCCEEEEECCTTTTSSCEEEEECCCCBCC
T ss_pred             EEEEEEC--CceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhc-CCCCCCcEEEECCCCCccCCeEEEEEecCCeec
Confidence            4555443  5678888776  3221  1122345566566665554 245688888888766   458999999999877


Q ss_pred             hhhhhhcCCChHHHHHHHHHHHHHHHHhhh
Q psy3347          76 MMHIHADVFSEPRAVFYAACVVLGLQYLHE  105 (245)
Q Consensus        76 ~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~  105 (245)
                      .+... ..++......++.+++..|..||+
T Consensus       129 ~~~~~-~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          129 WDQSL-PGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             CCTTC-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcc-ccCCHHHHHHHHHHHHHHHHHHhC
Confidence            54221 236777888899999999999997


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.40  E-value=3e-07  Score=75.38  Aligned_cols=90  Identities=13%  Similarity=-0.008  Sum_probs=55.5

Q ss_pred             cEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCC---eEEEEEeeccCCchhhhhhhcCCChH
Q psy3347          11 EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEA---HVCFVMEYAAGGDLMMHIHADVFSEP   87 (245)
Q Consensus        11 ~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~---~~~lv~e~~~~~~L~~~~~~~~l~~~   87 (245)
                      +.+++|+....     .....+.+|.+.+..+..-..-.+.+++......+   ..|+||++++|.++..... ..++..
T Consensus        41 ~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~-~~l~~~  114 (304)
T 3sg8_A           41 RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLL-NNLPKQ  114 (304)
T ss_dssp             TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHH-HTSCHH
T ss_pred             CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCcccc-ccCCHH
Confidence            56888876532     22345555655444442211112344444433332   4588999999988865332 347777


Q ss_pred             HHHHHHHHHHHHHHHhhhc
Q psy3347          88 RAVFYAACVVLGLQYLHES  106 (245)
Q Consensus        88 ~~~~i~~~i~~~l~~lH~~  106 (245)
                      +...++.+++..+..||+.
T Consensus       115 ~~~~~~~~l~~~la~LH~~  133 (304)
T 3sg8_A          115 SQNQAAKDLARFLSELHSI  133 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHcC
Confidence            8888999999999999974


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.77  E-value=0.00016  Score=59.51  Aligned_cols=89  Identities=17%  Similarity=0.122  Sum_probs=57.9

Q ss_pred             CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCC-CceeeeeEEEeeCCeEEEEEeeccCCchhhhhhhcCCChHH
Q psy3347          10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRH-PFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPR   88 (245)
Q Consensus        10 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h-~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~   88 (245)
                      |+.+++|+....     .....+.+|.+.+..+..... ..+.++++.    +..+++|||++|.++.... -..++...
T Consensus        57 g~~~vlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~l~~~~-~~~l~~~~  126 (320)
T 3r70_A           57 NEQYVVKVPKRD-----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGERITYEQ-YHKLSEKE  126 (320)
T ss_dssp             TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBCCCHHH-HTTSCHHH
T ss_pred             CCEEEEEeCCcH-----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCccccccc-cccCCHHH
Confidence            667888876432     222345666666666644211 223444443    5678999999998886433 23467777


Q ss_pred             HHHHHHHHHHHHHHhhhcCc
Q psy3347          89 AVFYAACVVLGLQYLHESRI  108 (245)
Q Consensus        89 ~~~i~~~i~~~l~~lH~~~i  108 (245)
                      ...++.+++..+..||+...
T Consensus       127 ~~~~~~~l~~~La~LH~~~~  146 (320)
T 3r70_A          127 KDALAYDEATFLKELHSIEI  146 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHhCCCc
Confidence            88899999999999997654


No 261
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.76  E-value=0.00026  Score=56.43  Aligned_cols=96  Identities=9%  Similarity=0.001  Sum_probs=64.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+......+..+.+|+-...      ....+.+|.+.+..+..  +--+.+++.++.+.+..++|||+++|.++.+...
T Consensus        41 v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~--~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~  112 (272)
T 4gkh_A           41 IYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTA--FMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLE  112 (272)
T ss_dssp             EEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTT--TSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHH
T ss_pred             EEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhcc--CCCcCeEEEEEEECCeEEEEEEeeCCcccccccc
Confidence            355555556778889976542      23445556555555542  3336778888888999999999999988876543


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhhcC
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHESR  107 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~~~  107 (245)
                      .   .......+..++...|.-||+..
T Consensus       113 ~---~~~~~~~~~~~l~~~L~~Lh~~~  136 (272)
T 4gkh_A          113 E---YPDSGENIVDALAVFLRRLHSIP  136 (272)
T ss_dssp             H---CGGGHHHHHHHHHHHHHHHHTSC
T ss_pred             C---CHHHHHHHHHHHHHHHHHhcCCC
Confidence            2   12344567788888899999753


No 262
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.67  E-value=0.0007  Score=55.29  Aligned_cols=93  Identities=9%  Similarity=-0.028  Sum_probs=59.9

Q ss_pred             CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEe-eCCeEEEEEeeccCCchhhhhhhcCCChHH
Q psy3347          10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ-TEAHVCFVMEYAAGGDLMMHIHADVFSEPR   88 (245)
Q Consensus        10 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~   88 (245)
                      |+.+++|+-..     ......+.+|.+.+..+..-..-.+.+++.++. ..+..+++||+++|.++.... -..++...
T Consensus        39 g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~~-~~~l~~~~  112 (306)
T 3tdw_A           39 NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDG-MAVLPDDA  112 (306)
T ss_dssp             TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHHHH-HTTSCHHH
T ss_pred             CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECchhh-hhhCCHHH
Confidence            56788887532     123345666655555554311113556666653 456678999999998886532 13466777


Q ss_pred             HHHHHHHHHHHHHHhhhcCc
Q psy3347          89 AVFYAACVVLGLQYLHESRI  108 (245)
Q Consensus        89 ~~~i~~~i~~~l~~lH~~~i  108 (245)
                      ...++.++...|..||+...
T Consensus       113 ~~~~~~~lg~~La~LH~~~~  132 (306)
T 3tdw_A          113 KDRLALQLAEFMNELSAFPV  132 (306)
T ss_dssp             HHHHHHHHHHHHHHHHHSCH
T ss_pred             HHHHHHHHHHHHHHHhcCCc
Confidence            78888899999999997643


No 263
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.06  E-value=0.0022  Score=53.68  Aligned_cols=88  Identities=7%  Similarity=0.055  Sum_probs=54.6

Q ss_pred             EeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC-CeEEEEEeeccCCchhhhhh
Q psy3347           2 ILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE-AHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         2 ~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~   80 (245)
                      |+...  .|+.+++|+....        ..+..|.+.+..+... .-.+.+++.++... +..+++||+++|.++.+   
T Consensus        58 y~v~~--~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~-gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l~~---  123 (362)
T 3ovc_A           58 FSFDV--GGRGYVLRVNSCA--------DGFYKDRYVYRHFASA-ALPIPEVLDIGEFSESLTYCISRRAQGVTLQD---  123 (362)
T ss_dssp             EEEEE--TTEEEEEEEESCC--------HHHHHHHHHHHHHCCS-SSCCCCEEEEEESSSSCEEEEEECCCSEETTT---
T ss_pred             EEEEE--CCcEEEEEeCCch--------hhHHHHHHHHHHHHhc-CCCCceEEEeccCCCCCeEEEEEecCCCCccc---
Confidence            54432  4788999977532        1345555555555432 12355666666554 67899999999877643   


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhhc
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHES  106 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~~  106 (245)
                         ++......++.+++..|.-||+.
T Consensus       124 ---l~~~~~~~~~~~lg~~La~LH~~  146 (362)
T 3ovc_A          124 ---LPETELPAVLQPVAEAMDAIAAA  146 (362)
T ss_dssp             ---SCGGGSGGGHHHHHHHHHHHHHC
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHhcC
Confidence               23334445667777788888875


No 264
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=96.90  E-value=0.0026  Score=52.81  Aligned_cols=98  Identities=11%  Similarity=0.028  Sum_probs=57.7

Q ss_pred             CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeC---CeEEEEEeeccCCchhhhhh----h-
Q psy3347          10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTE---AHVCFVMEYAAGGDLMMHIH----A-   81 (245)
Q Consensus        10 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~---~~~~lv~e~~~~~~L~~~~~----~-   81 (245)
                      |+.+++|+..............+.+|.+.++.+.....-.+.+++.++...   +..+++||+++|.++.+...    . 
T Consensus        52 ~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~~~~~~~~~~  131 (357)
T 3ats_A           52 QQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDN  131 (357)
T ss_dssp             EEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCBTTBGGGSCS
T ss_pred             CceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChhhcCccccccc
Confidence            667888876543200000013345555556666543123466677776554   45789999999987764321    0 


Q ss_pred             --cCCChHHHHHHHHHHHHHHHHhhhcC
Q psy3347          82 --DVFSEPRAVFYAACVVLGLQYLHESR  107 (245)
Q Consensus        82 --~~l~~~~~~~i~~~i~~~l~~lH~~~  107 (245)
                        ..++......++.+++..|.-||+..
T Consensus       132 ~~~~~~~~~~~~~~~~l~~~La~LH~~~  159 (357)
T 3ats_A          132 WFADAPAERQRQLQDATVAALATLHSIP  159 (357)
T ss_dssp             TTTTSCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence              12455555677888888888888653


No 265
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=96.30  E-value=0.013  Score=49.29  Aligned_cols=71  Identities=11%  Similarity=-0.007  Sum_probs=36.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccc-cch---hhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCC
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDI-IAR---DEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG   73 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~-~~~---~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~   73 (245)
                      ||++.+..+++.+++|....... ...   ...+....|.+.+..+.......+.+++.+  +....++|||++++.
T Consensus        46 vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lvmE~l~g~  120 (397)
T 2olc_A           46 VFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTVMEDLSHL  120 (397)
T ss_dssp             EEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEEECCCTTS
T ss_pred             EEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEEEEeCCCc
Confidence            57776665678999998653211 000   112334556555555544322234445543  344568999999764


No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=95.87  E-value=0.043  Score=44.76  Aligned_cols=66  Identities=9%  Similarity=0.053  Sum_probs=35.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcC--CCceeeee-E--EEeeCCeEEEEEeeccCCch
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMR--HPFLVNLF-A--CFQTEAHVCFVMEYAAGGDL   75 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~--h~ni~~~~-~--~~~~~~~~~lv~e~~~~~~L   75 (245)
                      ||+....  +..+++|+....    .   +.+..+.+.++.|...+  -|.++... |  +....+..+++|++++|.++
T Consensus        48 ~~~v~~~--~~~~vlk~~~~~----~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~G~~~  118 (346)
T 2q83_A           48 VWKVHTD--SGAVCLKRIHRP----E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPF  118 (346)
T ss_dssp             EEEEEET--TEEEEEEEECSC----H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCCCBCC
T ss_pred             EEEEEeC--CCCEEEEecCCC----H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeecCccC
Confidence            3554432  345889988752    1   22223444455554322  34443311 1  12346788999999998654


No 267
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=95.74  E-value=0.11  Score=42.30  Aligned_cols=81  Identities=7%  Similarity=-0.008  Sum_probs=57.0

Q ss_pred             CCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhhhcCCChHH
Q psy3347           9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPR   88 (245)
Q Consensus         9 ~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~   88 (245)
                      +++.+++|+....      ....+..|.+.+..+.......+.+++.+....+..++|||++++..+..           
T Consensus        58 ~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~~-----------  120 (312)
T 3jr1_A           58 EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNKQ-----------  120 (312)
T ss_dssp             SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCCT-----------
T ss_pred             CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCCc-----------
Confidence            4678889987642      13455666666666655434568888888888889999999999875421           


Q ss_pred             HHHHHHHHHHHHHHhhhcCc
Q psy3347          89 AVFYAACVVLGLQYLHESRI  108 (245)
Q Consensus        89 ~~~i~~~i~~~l~~lH~~~i  108 (245)
                        ....++...|+-||+.+.
T Consensus       121 --~~~~~lG~~LA~LH~~~~  138 (312)
T 3jr1_A          121 --SSFTIFAEKIAQLHQIQG  138 (312)
T ss_dssp             --THHHHHHHHHHHHHHCCC
T ss_pred             --hhHHHHHHHHHHHHcCCC
Confidence              244678888899998643


No 268
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=95.61  E-value=0.054  Score=43.64  Aligned_cols=86  Identities=12%  Similarity=-0.039  Sum_probs=53.1

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||++.. .+|+.+++|+......   .....+.+|.+.+..+.......+.+++++.    ..++|||+++++++.    
T Consensus        31 vy~v~~-~dG~~~vvK~~~~~~~---~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~~~----   98 (288)
T 3d1u_A           31 LYRVEL-ADGTPLFVKALPDDAP---ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERPPT----   98 (288)
T ss_dssp             EEEEEE-TTSCEEEEEECCTTCC---CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCCCC----
T ss_pred             eEEEEe-CCCCeEEEEecCCCCc---chhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCCCC----
Confidence            466654 3588999998754321   1123455565555544432223566776653    368999999987642    


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhhcC
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHESR  107 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~~~  107 (245)
                           .    ....++...|+-||+..
T Consensus        99 -----~----~~~~~lg~~LA~LH~~~  116 (288)
T 3d1u_A           99 -----P----EAAERFGHQLAAMHLAG  116 (288)
T ss_dssp             -----H----HHHHHHHHHHHHHHHTC
T ss_pred             -----h----HHHHHHHHHHHHHHcCC
Confidence                 1    24567888899999863


No 269
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.31  E-value=0.071  Score=41.13  Aligned_cols=101  Identities=16%  Similarity=0.061  Sum_probs=58.6

Q ss_pred             Cchhhhhh--hcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCc
Q psy3347          73 GDLMMHIH--ADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGY  150 (245)
Q Consensus        73 ~~L~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (245)
                      -+|.+.++  ..++++.+++.++.|.+.+|.-+-...--|..  -+.|                      ....+..+|.
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~--i~~~----------------------~~i~l~~dG~   88 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHR--VRSA----------------------AQIRVWRDGA   88 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC--CCSG----------------------GGEEEETTSC
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCce--ecCC----------------------cceEEecCCc
Confidence            47888884  56899999999999999988766221000110  0111                      1225666777


Q ss_pred             eEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHHHHHHHHHHHHh-CCCC
Q psy3347         151 VKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLV-GESP  211 (245)
Q Consensus       151 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~-g~~p  211 (245)
                      +...+ +.+.            .....+.|||... ...+.+.=|||||+++|..+. |-++
T Consensus        89 V~f~~-~~s~------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e  136 (229)
T 2yle_A           89 VTLAP-AADD------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE  136 (229)
T ss_dssp             EEECC-C------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             eeccc-cccc------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence            76554 1110            1122366888762 345578899999999999987 5544


No 270
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=94.01  E-value=0.18  Score=40.53  Aligned_cols=83  Identities=14%  Similarity=0.035  Sum_probs=40.6

Q ss_pred             cEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeec-cCCchhhhhhhcCCChHHH
Q psy3347          11 EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYA-AGGDLMMHIHADVFSEPRA   89 (245)
Q Consensus        11 ~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~-~~~~L~~~~~~~~l~~~~~   89 (245)
                      +.+++|+.....    ...-+..+|.+.++.+....-+  .+++..+  ...-++++||+ +|.++......      ..
T Consensus        38 ~~~vlR~~~~~~----~~~~~r~~E~~~l~~l~~~g~~--P~~~~~~--~~~~~~v~e~i~~g~~l~~~~~~------~~  103 (301)
T 3dxq_A           38 GDLCLRIPGKGT----EEYINRANEAVAAREAAKAGVS--PEVLHVD--PATGVMVTRYIAGAQTMSPEKFK------TR  103 (301)
T ss_dssp             TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSS--CCEEEEC--TTTCCEEEECCTTCEECCHHHHH------HS
T ss_pred             eeEEEECCCCCc----cceeCHHHHHHHHHHHHHcCCC--CceEEEE--CCCCEEEEeecCCCccCCHhhHh------hh
Confidence            457777775421    1111223455555556543322  4455443  33346899999 66555321100      00


Q ss_pred             HHHHHHHHHHHHHhhhcC
Q psy3347          90 VFYAACVVLGLQYLHESR  107 (245)
Q Consensus        90 ~~i~~~i~~~l~~lH~~~  107 (245)
                      ..+..+++..|.-+|+.+
T Consensus       104 ~~~~~~~~~~La~lH~~~  121 (301)
T 3dxq_A          104 PGSPARAGEAFRKLHGSG  121 (301)
T ss_dssp             TTHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHhCCC
Confidence            124556667777777654


No 271
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=93.84  E-value=0.22  Score=42.20  Aligned_cols=68  Identities=12%  Similarity=0.049  Sum_probs=33.9

Q ss_pred             CEeEEEecCCcEEEEEEeecccc-cchh---hHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeec-cC
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDI-IARD---EVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYA-AG   72 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~-~~~~---~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~-~~   72 (245)
                      ||++..  +++.+++|....... ....   .......|.+.+..+.......+.+++.+.  .+..++|||++ ++
T Consensus        50 vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv~e~l~~g  122 (420)
T 2pyw_A           50 VFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIGMRYLEPP  122 (420)
T ss_dssp             EEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEEECCCCTT
T ss_pred             EEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEEEeecCCc
Confidence            465533  467899994332110 0000   001112233333333333334566666665  56779999999 76


No 272
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=93.49  E-value=0.33  Score=39.55  Aligned_cols=85  Identities=12%  Similarity=0.036  Sum_probs=45.8

Q ss_pred             CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhhhcCCChHHH
Q psy3347          10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA   89 (245)
Q Consensus        10 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~   89 (245)
                      |+.+++|......   .   +....|.+.+..+.... -.+.+++.+....+  +++||.+++.++..++.......   
T Consensus        43 ~~~~vlk~~~~~~---~---~~~~~e~~~l~~L~~~g-~~vP~v~~~d~~~g--~ll~e~l~~~~l~~~l~~~~~~~---  110 (333)
T 3csv_A           43 GAKAVLMDWSPEE---G---GDTQPFVDLAQYLRNLD-ISAPEIYAEEHARG--LLLIEDLGDALFTEVINNDPAQE---  110 (333)
T ss_dssp             CCEEEEEECCTTT---T---CCSHHHHHHHHHHHHTT-CBCCCEEEEETTTT--EEEECCCCSCBHHHHHHHCGGGH---
T ss_pred             CCeEEEEECCCCC---C---ccccHHHHHHHHHHhCC-CCCCceeeecCCCC--EEEEeeCCCcchHHHhcCCCccH---
Confidence            6677777544321   0   12233444555555432 23555666544444  68999998777766654332211   


Q ss_pred             HHHHHHHHHHHHHhhhc
Q psy3347          90 VFYAACVVLGLQYLHES  106 (245)
Q Consensus        90 ~~i~~~i~~~l~~lH~~  106 (245)
                      .....+++..|.-+|..
T Consensus       111 ~~~~~~~~~~La~lH~~  127 (333)
T 3csv_A          111 MPLYRAAVDLLIHLHDA  127 (333)
T ss_dssp             HHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhcC
Confidence            34455666666667754


No 273
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=90.38  E-value=0.9  Score=36.58  Aligned_cols=60  Identities=8%  Similarity=-0.003  Sum_probs=31.2

Q ss_pred             cEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcC--CCceeeee-E--EEeeCCeEEEEEeeccCCch
Q psy3347          11 EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMR--HPFLVNLF-A--CFQTEAHVCFVMEYAAGGDL   75 (245)
Q Consensus        11 ~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~--h~ni~~~~-~--~~~~~~~~~lv~e~~~~~~L   75 (245)
                      ..+++|+.....  .   .+.+..|.+.++.+...+  -|.++... |  +....+..+++|++++|..+
T Consensus        46 g~~vlk~~~~~~--~---~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~  110 (322)
T 2ppq_A           46 DPLILTLYEKRV--E---KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLEGMWL  110 (322)
T ss_dssp             CCEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCCCBCC
T ss_pred             ccEEEEEeCCCC--C---HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeCCCcCC
Confidence            368888886521  1   123334555555555422  23333211 1  11235678999999988654


No 274
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=87.82  E-value=2.5  Score=35.28  Aligned_cols=82  Identities=15%  Similarity=0.186  Sum_probs=50.2

Q ss_pred             CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhhhcCCChHHH
Q psy3347          10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA   89 (245)
Q Consensus        10 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~   89 (245)
                      ++.+++|+....    ........+|.+++..+...+-  ..++++.+.  +.  +||||++|.++..-    .+..   
T Consensus        82 ~~~~vlR~~g~~----~~~~~~~~rE~~vl~~L~~~gv--~P~ll~~~~--~g--~v~e~i~G~~l~~~----~l~~---  144 (379)
T 3feg_A           82 PREVLLRLYGAI----LQGVDSLVLESVMFAILAERSL--GPQLYGVFP--EG--RLEQYIPSRPLKTQ----ELRE---  144 (379)
T ss_dssp             CSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTS--SCCEEEEET--TE--EEEECCSEEECCGG----GGGC---
T ss_pred             CCeEEEEECCCc----cchHHHHHHHHHHHHHHHhcCC--CCeEEEEcC--Cc--cEEEEecCccCChh----HhCC---
Confidence            578999986331    1223455677777777765433  256666653  32  99999998665421    1111   


Q ss_pred             HHHHHHHHHHHHHhhhcCc
Q psy3347          90 VFYAACVVLGLQYLHESRI  108 (245)
Q Consensus        90 ~~i~~~i~~~l~~lH~~~i  108 (245)
                      ..+..+++..|+-||+..+
T Consensus       145 p~~~~~ia~~La~LH~~~~  163 (379)
T 3feg_A          145 PVLSAAIATKMAQFHGMEM  163 (379)
T ss_dssp             HHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHHHhCCCC
Confidence            2356778899999998643


No 275
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=80.94  E-value=9.3  Score=30.02  Aligned_cols=86  Identities=12%  Similarity=-0.014  Sum_probs=46.5

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      ||+... .+|+.|.+|+-......   ....+..|.+.++.|....---+.+++.+.    ..+++||+..++..     
T Consensus        31 vyrv~l-~DG~~~~vK~~~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~~~-----   97 (288)
T 3f7w_A           31 LYRVEL-ADGTPLFVKALPDDAPA---LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERPP-----   97 (288)
T ss_dssp             EEEEEE-TTSCEEEEEECCTTCCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCCC-----
T ss_pred             EEEEEE-CCCCEEEEEEeCCCCcc---hhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecccCC-----
Confidence            465543 46899999987643211   123345565666666432211233444432    23789999876432     


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhhcC
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHESR  107 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~~~  107 (245)
                          ....    ..++...|.-+|...
T Consensus        98 ----~~~~----~~~lg~~La~lH~~~  116 (288)
T 3f7w_A           98 ----TPEA----AERFGHQLAAMHLAG  116 (288)
T ss_dssp             ----CHHH----HHHHHHHHHHHHHTC
T ss_pred             ----ChHH----HHHHHHHHHhhhhcc
Confidence                2121    235667777888653


No 276
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=76.31  E-value=20  Score=28.96  Aligned_cols=87  Identities=8%  Similarity=-0.050  Sum_probs=49.4

Q ss_pred             EeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEE------EeeCCeEEEEEeeccCCch
Q psy3347           2 ILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFAC------FQTEAHVCFVMEYAAGGDL   75 (245)
Q Consensus         2 ~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~------~~~~~~~~lv~e~~~~~~L   75 (245)
                      |+.... +| .+++|+......         ..|.+.++.|....-|++.+++..      ....+..+++|++++|..+
T Consensus        40 y~v~~~-~g-~~vLK~~~~~~~---------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~~~  108 (339)
T 3i1a_A           40 YQADSE-SK-SYFIKLKYGYHD---------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNG  108 (339)
T ss_dssp             EEEECS-SC-EEEEEEEECSSC---------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCCBT
T ss_pred             EEEEeC-CC-CEEEEEecCccc---------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCCcC
Confidence            544332 34 899998775431         123333444443333334444432      2345788999999998766


Q ss_pred             hhhhhhcCCChHHHHHHHHHHHHHHHHhhhcC
Q psy3347          76 MMHIHADVFSEPRAVFYAACVVLGLQYLHESR  107 (245)
Q Consensus        76 ~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~  107 (245)
                      ..    ...+..    .+.++...|.-||+..
T Consensus       109 ~~----~~~~~~----~~~~lg~~La~LH~~~  132 (339)
T 3i1a_A          109 FT----QNLTGK----QWKQLGKVLRQIHETS  132 (339)
T ss_dssp             TT----SCCCHH----HHHHHHHHHHHHHTCC
T ss_pred             cc----cCCCHH----HHHHHHHHHHHHhCcC
Confidence            21    223332    2457788888899764


No 277
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=72.92  E-value=22  Score=27.00  Aligned_cols=120  Identities=8%  Similarity=0.104  Sum_probs=76.4

Q ss_pred             HHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCccccCCCCCCH
Q psy3347          39 FEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRIIYRPQSNITK  118 (245)
Q Consensus        39 ~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~~~~~i~~  118 (245)
                      +.+|. ..||++++. .+-...+.+.+.++.-++  ...|-.-...+.....+++.+++....+++.+  .|-   -+.|
T Consensus        37 l~LL~-~~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f~~ik~~~~~eKlr~l~ni~~l~~~~~~r--~tf---~L~P  107 (215)
T 4ann_A           37 MYLLE-QHSPYFIDA-ELTELRDSFQIHYDINDN--HTPFDNIKSFTKNEKLRYLLNIKNLEEVNRTR--YTF---VLAP  107 (215)
T ss_dssp             GGGGG-SCCTTBCCE-EEEECSSEEEEEECCCTT--SEEGGGGGGSCHHHHHHHHHHGGGGGGGGGSS--EEC---CCSG
T ss_pred             HHHHh-ccCCcccce-EEEEcccEEEEEEEcCcc--cCCHHHHHhcCHHHHHHHHHHHHHHHHHhcCc--eEE---EEec
Confidence            44453 358888876 566677777777775442  22222223467788889999988877555433  333   5677


Q ss_pred             HHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHH-H
Q psy3347         119 EEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWW-G  197 (245)
Q Consensus       119 ~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw-s  197 (245)
                      +||                      +.+.++.+++.-.|....                 ++|.     ..+ ..|.| .
T Consensus       108 ~NL----------------------~f~~~~~p~i~~RGik~~-----------------l~P~-----~~~-ee~fL~q  142 (215)
T 4ann_A          108 DEL----------------------FFTRDGLPIAKTRGLQNV-----------------VDPL-----PVS-EAEFLTR  142 (215)
T ss_dssp             GGE----------------------EECTTSCEEESCCEETTT-----------------BSCC-----CCC-HHHHHHH
T ss_pred             ceE----------------------EEcCCCCEEEEEccCccC-----------------CCCC-----CCC-HHHHHHH
Confidence            788                      889999999988775321                 1111     122 23444 6


Q ss_pred             HHHHHHHHHhCCCCC
Q psy3347         198 LGVLIFEMLVGESPF  212 (245)
Q Consensus       198 lG~~l~el~~g~~pf  212 (245)
                      +=|++..+++++..|
T Consensus       143 yKAliiall~~K~~F  157 (215)
T 4ann_A          143 YKALVICAFNEKQSF  157 (215)
T ss_dssp             HHHHHHHHHCTTCCH
T ss_pred             HHHHHHHHHcCCCCH
Confidence            668888888888877


No 278
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=72.61  E-value=12  Score=29.83  Aligned_cols=83  Identities=12%  Similarity=0.050  Sum_probs=45.9

Q ss_pred             CCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEE-----EeeCCeEEEEEeeccCCchhhhhhhcC
Q psy3347           9 TGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFAC-----FQTEAHVCFVMEYAAGGDLMMHIHADV   83 (245)
Q Consensus         9 ~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~-----~~~~~~~~lv~e~~~~~~L~~~~~~~~   83 (245)
                      +|+.+++|....... .   .+.+..|.+.+..+....- .+.+++..     ...++..+++|++++|.++..      
T Consensus        48 ~g~~~vlK~~~~~~~-~---~~~~~~E~~~~~~L~~~g~-~vp~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~------  116 (328)
T 1zyl_A           48 DRRRFVVKFYRPERW-T---ADQILEEHQFALQLVNDEV-PVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA------  116 (328)
T ss_dssp             TCCCEEEEEECTTTS-C---HHHHHHHHHHHHHHHHTTC-SBCCCCCBTTBSCEEETTEEEEEEECCCCEECCS------
T ss_pred             CCCEEEEEEcCCCCC-C---HHHHHHHHHHHHHHHHcCC-eecceeecCCcEEEEECCEEEEEEEecCCCCCCC------
Confidence            466799999864321 1   2334445555555554321 23333332     233567789999998865431      


Q ss_pred             CChHHHHHHHHHHHHHHHHhhhc
Q psy3347          84 FSEPRAVFYAACVVLGLQYLHES  106 (245)
Q Consensus        84 l~~~~~~~i~~~i~~~l~~lH~~  106 (245)
                      .+.    ..+.++...|.-+|..
T Consensus       117 ~~~----~~~~~~g~~La~lH~~  135 (328)
T 1zyl_A          117 DNI----DQMEAVGRYLGRMHQT  135 (328)
T ss_dssp             SCH----HHHHHHHHHHHHHHHH
T ss_pred             CCH----HHHHHHHHHHHHHHHh
Confidence            111    2345677777778864


No 279
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=69.94  E-value=18  Score=30.57  Aligned_cols=80  Identities=15%  Similarity=0.205  Sum_probs=46.9

Q ss_pred             CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhhhcCCChHHH
Q psy3347          10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA   89 (245)
Q Consensus        10 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~   89 (245)
                      ++.+++|+.....  .   .+.+.+|.+.+..+...+  -..++++.+.  +.  +++||++|.++...    .+..   
T Consensus       105 ~~~~vlRi~~~~~--~---~~~li~E~~~l~~L~~~g--~~P~l~~~~~--~g--~v~e~l~G~~l~~~----~l~~---  166 (429)
T 1nw1_A          105 PNKVLLRVYFNPE--T---ESHLVAESVIFTLLSERH--LGPKLYGIFS--GG--RLEEYIPSRPLSCH----EISL---  166 (429)
T ss_dssp             CSEEEEEEECSCC--C---HHHHHHHHHHHHHHHHTT--SSSCEEEEET--TE--EEECCCCEEECCTT----GGGS---
T ss_pred             CceEEEEEeCCCC--c---HHHHHHHHHHHHHHHhCC--CCCcEEEEeC--CC--EEEEEeCCcccChh----hcCC---
Confidence            5789999884321  1   133445666666665432  2355666553  32  89999987555321    1111   


Q ss_pred             HHHHHHHHHHHHHhhhcC
Q psy3347          90 VFYAACVVLGLQYLHESR  107 (245)
Q Consensus        90 ~~i~~~i~~~l~~lH~~~  107 (245)
                      ..++.+++..|+-||+..
T Consensus       167 ~~~~~~ia~~La~LH~~~  184 (429)
T 1nw1_A          167 AHMSTKIAKRVAKVHQLE  184 (429)
T ss_dssp             HHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHhCCc
Confidence            235678888889999854


No 280
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=66.95  E-value=30  Score=28.12  Aligned_cols=79  Identities=15%  Similarity=0.159  Sum_probs=43.6

Q ss_pred             cEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhhhcCCChHHHH
Q psy3347          11 EYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAV   90 (245)
Q Consensus        11 ~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~   90 (245)
                      +.+++|+.....    ....+...|.+.++.+...+-  +.++++.+  .+  +++|||++|.++...-    +..   .
T Consensus        67 ~~~vlRi~~~~~----~~~~~~~~E~~~l~~L~~~g~--~P~~~~~~--~~--~~v~e~i~G~~l~~~~----~~~---~  129 (369)
T 3c5i_A           67 TRVLFRIYGKHV----DELYNTISEFEVYKTMSKYKI--APQLLNTF--NG--GRIEEWLYGDPLRIDD----LKN---P  129 (369)
T ss_dssp             CEEEEEECCTTG----GGTSCHHHHHHHHHHHHHTTS--SCCEEEEE--TT--EEEEECCCSEECCGGG----GGC---H
T ss_pred             ceEEEEecCCCc----cceecHHHHHHHHHHHHhcCC--CCceEEec--CC--cEEEEEecCCcCChhh----cCC---h
Confidence            678888876431    111122445555666654321  34555544  33  6899999886542210    111   2


Q ss_pred             HHHHHHHHHHHHhhhc
Q psy3347          91 FYAACVVLGLQYLHES  106 (245)
Q Consensus        91 ~i~~~i~~~l~~lH~~  106 (245)
                      ..+.+++..|+-+|+.
T Consensus       130 ~~~~~~a~~La~lH~~  145 (369)
T 3c5i_A          130 TILIGIANVLGKFHTL  145 (369)
T ss_dssp             HHHHHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHHHHHcC
Confidence            3456778888888864


No 281
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=65.36  E-value=28  Score=29.69  Aligned_cols=91  Identities=15%  Similarity=0.219  Sum_probs=50.0

Q ss_pred             CEeEEEecCCcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhh
Q psy3347           1 VILSQYRNTGEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIH   80 (245)
Q Consensus         1 V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   80 (245)
                      +|+.....+++.+++|+.....    ...-+-.+|.+.+..|...+  -..++++.+  .+.  ++|||++|.++..   
T Consensus       124 ~y~v~~~~~~~~~vLRi~g~~~----~~~idR~~E~~vl~~L~~~g--l~P~ll~~~--~~G--~v~e~I~G~~l~~---  190 (458)
T 2qg7_A          124 LIKVKDMSKQAKYLIRLYGPKT----DEIINREREKKISCILYNKN--IAKKIYVFF--TNG--RIEEFMDGYALSR---  190 (458)
T ss_dssp             EEEEEETTTTEEEEEEEECC-C----CSCSCHHHHHHHHHHHTTSS--SBCCEEEEE--TTE--EEEECCCSEECCT---
T ss_pred             EEEEEECCCCceEEEEECCCCh----hhhcCHHHHHHHHHHHHhcC--CCCCEEEEe--CCe--EEEEeeCCccCCh---
Confidence            3555544334788899875321    11111134555555554322  235666666  332  5999998865532   


Q ss_pred             hcCCChHHHHHHHHHHHHHHHHhhhcCc
Q psy3347          81 ADVFSEPRAVFYAACVVLGLQYLHESRI  108 (245)
Q Consensus        81 ~~~l~~~~~~~i~~~i~~~l~~lH~~~i  108 (245)
                       ..+..   ..++.+++..|+-||+...
T Consensus       191 -~~l~~---~~~~~~ia~~La~LH~~~~  214 (458)
T 2qg7_A          191 -EDIKN---PKFQKLIAKNLKLLHDIKL  214 (458)
T ss_dssp             -TTTTS---HHHHHHHHHHHHHHHTCCC
T ss_pred             -hhcCC---HHHHHHHHHHHHHHhcCCc
Confidence             11221   2456778888999997654


No 282
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=64.02  E-value=42  Score=25.53  Aligned_cols=118  Identities=14%  Similarity=0.110  Sum_probs=74.8

Q ss_pred             HHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCC-chhhhhhhcCCChHHHHHHHHHHHHHHH-HhhhcCccccCCCCC
Q psy3347          39 FEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGG-DLMMHIHADVFSEPRAVFYAACVVLGLQ-YLHESRIIYRPQSNI  116 (245)
Q Consensus        39 ~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~-~L~~~~~~~~l~~~~~~~i~~~i~~~l~-~lH~~~i~H~~~~~i  116 (245)
                      ++++. ..||++  -..+-..++.+.+.++.-+++ ++.. +  ...+.....+++.+++.... +++.+  +|-   -+
T Consensus        42 ~~lL~-~~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i--~~~~~~eKlrll~nl~~L~~~~~~~r--~tf---~l  110 (219)
T 4ano_A           42 LEVLK-EVDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-I--RKTTLLSRIRAAIHLVSKVKHHSARR--LIF---IV  110 (219)
T ss_dssp             GGGGG-GSCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-H--HTSCHHHHHHHHHHHHHHHSSCCSSS--EEC---CC
T ss_pred             HHHHh-ccCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-H--HhcCHHHHHHHHHHHHHHHHHhhhCc--eeE---EE
Confidence            34443 357887  555557778888888865332 3332 2  45778888999988887666 44443  333   56


Q ss_pred             CHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCccCCCCCCCCCCcccCCCCccccccccCCCCCcchhHH
Q psy3347         117 TKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWW  196 (245)
Q Consensus       117 ~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  196 (245)
                      .|+||                      +.+.++.+++.-.|.-..                 ++|..     . ...|.|
T Consensus       111 ~P~NL----------------------~f~~~~~p~i~hRGi~~~-----------------lpP~e-----~-~ee~fl  145 (219)
T 4ano_A          111 CPENL----------------------MFNRALEPFFLHVGVKES-----------------LPPDE-----W-DDERLL  145 (219)
T ss_dssp             CGGGE----------------------EECTTCCEEESCCEETTT-----------------BSSCS-----C-CHHHHH
T ss_pred             eCceE----------------------EEeCCCcEEEEEcCCccc-----------------CCCCC-----C-CHHHHH
Confidence            67777                      889999999988885321                 12221     1 223444


Q ss_pred             -HHHHHHHHHHhCCCCC
Q psy3347         197 -GLGVLIFEMLVGESPF  212 (245)
Q Consensus       197 -slG~~l~el~~g~~pf  212 (245)
                       ++=|++..++.++.-|
T Consensus       146 ~qyKali~all~~K~~F  162 (219)
T 4ano_A          146 REVKATVLALTEGEYRF  162 (219)
T ss_dssp             HHHHHHHHHHTTCSSCH
T ss_pred             HHHHHHHHHHHcCCCCH
Confidence             6667888888777765


No 283
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=57.58  E-value=40  Score=28.40  Aligned_cols=82  Identities=15%  Similarity=0.116  Sum_probs=46.5

Q ss_pred             CcEEEEEEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhhhcCCChHHH
Q psy3347          10 GEYFAIKALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRA   89 (245)
Q Consensus        10 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~   89 (245)
                      ++.+++|+.....    ...-+-.+|.+.+..+...+  -..++++.+  .+  ++||||++|.+|..-    .+..   
T Consensus       102 ~~~~vlRi~g~~t----~~~idR~~E~~~l~~L~~~g--i~P~l~~~~--~~--~~I~efI~G~~l~~~----~l~~---  164 (424)
T 3mes_A          102 HPRILFRIYGKHV----GKFYDSKVELDVFRYLSNIN--IAPNIIADF--PE--GRIEEFIDGEPLTTK----QLQL---  164 (424)
T ss_dssp             CSEEEEEECCCCC-----CCCCHHHHHHHHHHHHHTT--SSCCEEEEE--TT--EEEEECCCSEECCTG----GGGS---
T ss_pred             CCeEEEEECCCCc----chhcCHHHHHHHHHHHHhcC--CCCCEEEEc--CC--CEEEEEeCCccCChh----hcCC---
Confidence            5789999875421    11112244555666665432  234555433  33  688999998655321    1111   


Q ss_pred             HHHHHHHHHHHHHhhhcCc
Q psy3347          90 VFYAACVVLGLQYLHESRI  108 (245)
Q Consensus        90 ~~i~~~i~~~l~~lH~~~i  108 (245)
                      ..+..+++..|+-||+..+
T Consensus       165 ~~~~~~ia~~La~LH~~~~  183 (424)
T 3mes_A          165 THICVEVAKNMGSLHIINS  183 (424)
T ss_dssp             HHHHHHHHHHHHHHHTHHH
T ss_pred             HHHHHHHHHHHHHHhcCch
Confidence            2366778888889997654


No 284
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=48.87  E-value=7.4  Score=32.50  Aligned_cols=15  Identities=13%  Similarity=0.268  Sum_probs=11.5

Q ss_pred             CCCCceEEeecCCcc
Q psy3347         146 DTEGYVKIADFGLCK  160 (245)
Q Consensus       146 ~~~~~~kl~Dfg~~~  160 (245)
                      +.+..+.++||..|.
T Consensus       265 ~~~~~l~vIDwEya~  279 (401)
T 3g15_A          265 SEKQKLMLIDFEYSS  279 (401)
T ss_dssp             CSSCCEEECCCTTCE
T ss_pred             CcCCeEEEechHhcc
Confidence            345678999998875


No 285
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=44.51  E-value=2.7  Score=36.13  Aligned_cols=54  Identities=6%  Similarity=-0.028  Sum_probs=11.0

Q ss_pred             CEeEEEecCCcEEEE------EEeecccccchhhHHHHHHHHHHHHHHhhcCCCceeeeeEEEe
Q psy3347           1 VILSQYRNTGEYFAI------KALKKGDIIARDEVESLLSEKRIFEVANTMRHPFLVNLFACFQ   58 (245)
Q Consensus         1 V~~a~~~~~~~~vai------K~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~h~ni~~~~~~~~   58 (245)
                      ||+|.......+||+      |..+..... .+....+.++   ..+++.++|||+++.+++-.
T Consensus       155 v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~-~e~~~~~~re---a~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          155 LNREPAYKKHMPVLKETHDERDSTGQDGVS-EKRLTSLVRR---ATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             C---------CCBGGGC---------------------------------------CBCCCEEE
T ss_pred             hhcccccccCCchhhhhccCcccccccccc-cccccccccc---ccccccccccccCCCcceEE
Confidence            677777655568888      766543221 1222333333   44566778999999988754


No 286
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=37.69  E-value=76  Score=26.52  Aligned_cols=62  Identities=13%  Similarity=0.153  Sum_probs=37.9

Q ss_pred             HHHHHHHHHhhcCCCceeeeeEEEeeCCeEEEEEeeccCCchhhhhhhcCCChHHHHHHHHHHHHHHHHhhhcCc
Q psy3347          34 SEKRIFEVANTMRHPFLVNLFACFQTEAHVCFVMEYAAGGDLMMHIHADVFSEPRAVFYAACVVLGLQYLHESRI  108 (245)
Q Consensus        34 ~e~~~~~~l~~~~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i  108 (245)
                      .|.+.++.+...+  -..++++.+.  +.  +++||++|.+|..    ..+..   ..+..+++..|+-+|+..+
T Consensus       123 ~E~~~l~~L~~~G--i~Pkl~~~~~--~G--~i~efI~G~~L~~----~dl~~---p~~~~~iA~~L~~LH~~~~  184 (401)
T 3f2s_A          123 LESVMFAILAERS--LGPKLYGIFP--QG--RLEQFIPSRRLDT----EELSL---PDISAEIAEKMATFHGMKM  184 (401)
T ss_dssp             HHHHHHHHHHHTT--SSCCEEEEET--TE--EEEECCCEEECCG----GGGGS---HHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHhcC--CCCeEEEEeC--CC--eEEEecCCccCCH----HHHhh---HHHHHHHHHHHHHHhCCCC
Confidence            3555566665432  2566777663  32  8999999765532    11111   2356778888999998754


No 287
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=35.02  E-value=29  Score=27.47  Aligned_cols=29  Identities=7%  Similarity=-0.010  Sum_probs=21.9

Q ss_pred             hcCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCcc
Q psy3347         105 ESRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK  160 (245)
Q Consensus       105 ~~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~  160 (245)
                      ...++|+   |..+.||                      +.+ + .+.++||+.+.
T Consensus       194 ~~~l~Hg---D~~~~Ni----------------------l~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          194 TVLRLHG---DCHAGNI----------------------LWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CCEECCS---SCSGGGE----------------------EES-S-SEEECCCTTCC
T ss_pred             CeeeeeC---CCCcccE----------------------eEc-C-CCEEEECCCCC
Confidence            3467899   7777787                      665 3 78999998765


No 288
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=27.04  E-value=33  Score=27.65  Aligned_cols=30  Identities=13%  Similarity=0.119  Sum_probs=23.2

Q ss_pred             cCccccCCCCCCHHHHHHHHHHhhhccccCcccchhccccCCCCceEEeecCCcc
Q psy3347         106 SRIIYRPQSNITKEEIKRIEAKVQENYKVNSSQEIKLTVNDTEGYVKIADFGLCK  160 (245)
Q Consensus       106 ~~i~H~~~~~i~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~  160 (245)
                      ..++|+   |..+.|+                      +++.++.+.++||+.+.
T Consensus       206 ~~~~Hg---D~~~~N~----------------------l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          206 YVLCHS---DIHAGNV----------------------LVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             CEEECS---CCCGGGE----------------------EECGGGCEEECCCSSCE
T ss_pred             ceeEeC---CCCcCCE----------------------EEeCCCeEEEEECCCCe
Confidence            468999   7777777                      66666779999998765


No 289
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=23.15  E-value=5  Score=34.52  Aligned_cols=25  Identities=20%  Similarity=0.107  Sum_probs=20.5

Q ss_pred             HHHHHHHhhcCCCceeeeeEEEeeC
Q psy3347          36 KRIFEVANTMRHPFLVNLFACFQTE   60 (245)
Q Consensus        36 ~~~~~~l~~~~h~ni~~~~~~~~~~   60 (245)
                      ..+++.+.+++|+|++++.|||...
T Consensus       327 ~~Eve~L~~i~HrNLV~L~gyC~s~  351 (487)
T 3oja_A          327 RLECERENQARQREIDALKEQYRTV  351 (487)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHhcccccchhhHHHHhcCh
Confidence            3447778888999999999999664


Done!