BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3351
(276 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3MC2|A Chain A, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
pdb|3MC2|B Chain B, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
pdb|3MC2|C Chain C, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
pdb|3MC2|D Chain D, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
Length = 687
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 99/247 (40%), Gaps = 82/247 (33%)
Query: 15 LRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYN 74
L+GKK+C VGT GW +P+ ++ G D +F SCA
Sbjct: 451 LQGKKSCHTAVGTSEGWNVPMGLIYDQTGSCKFDA---------FFSRSCA--------- 492
Query: 75 PIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMIEGRI 134
P D LC LC+G G A C + E
Sbjct: 493 PGSDPDSPLCALCVG--------------GNNPAHMCAANNAE----------------- 521
Query: 135 DACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRI 194
G +GA RCLV+KG+VAF+KH TV + +G+
Sbjct: 522 --------------------------GYHGSSGALRCLVEKGDVAFMKHPTVLQNTDGKN 555
Query: 195 D---AYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQFLI 251
A GL E+FELLC DGTR+PV QSC+ +VP+ AV + K+ +RR L
Sbjct: 556 PEPWAKGLKHEDFELLCLDGTRKPVTEAQSCHLARVPNRAVFSRKDKADFVRR----ILF 611
Query: 252 KTVQLFG 258
+LFG
Sbjct: 612 NQQELFG 618
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ LRGKK+C G+G AGW +P+ L+ +G E + +F SC
Sbjct: 114 QLNQLRGKKSCHTGLGWSAGWYVPLSTLLPSGSRET--------AAATFFSSSCV----- 160
Query: 71 NKYNPIGDNS--DRLCELCIGRVPGE-KCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D LC+LC G+ + C++ +PY G GA +CL D +V+F+KH TV
Sbjct: 161 ----PCADGKMFPSLCQLCAGKGTDKCACSSREPYFGSWGALKCLQDGTADVSFVKHLTV 216
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 217 FEAMPTKADRDQYELL 232
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 15/104 (14%)
Query: 167 GAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWG 225
GA +CL D +V+F+KH TV E + + D ++ +ELLC D TR+PV+ Y+ C
Sbjct: 196 GALKCLQDGTADVSFVKHLTVFEAMPTKAD-----RDQYELLCMDNTRRPVEEYEQCYLA 250
Query: 226 QVPSNAVMTTSAKST-----QIRRYYQQFLIKT----VQLFGGP 260
+VPS+ V+ S ++ R Q+ K QLFG P
Sbjct: 251 RVPSHVVVARSVDGKEDSIQELLRVAQEHFGKDKSSPFQLFGSP 294
>pdb|2D3I|A Chain A, Crystal Structure Of Aluminum-Bound Ovotransferrin At 2.15
Angstrom Resolution
Length = 686
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 103/240 (42%), Gaps = 79/240 (32%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
++L+GKK+C VG AGWVIP+ ++ G CN YF CA
Sbjct: 446 NNLKGKKSCHTAVGRTAGWVIPMGLIHNRTGT----CN-----FDEYFSEGCA------- 489
Query: 73 YNPIGDNSDRLCELCIGR--VPGEKC--TTADPYAGFEGAFRCLVDKGEVAFLKHTTVQE 128
P + RLC+LC G +P EKC ++ + Y G+ GA RCLV+KG+VAF++H+TV+E
Sbjct: 490 --PGSPPNSRLCQLCQGSGGIPPEKCVASSHEKYFGYTGALRCLVEKGDVAFIQHSTVEE 547
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQE 188
G+ A K L+M F L
Sbjct: 548 NTGGKNKA----DWAKNLQMDDFELL---------------------------------- 569
Query: 189 MIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQ 248
CTDG R V +Y+ CN +VP++AV+ K+ +IR ++
Sbjct: 570 -------------------CTDGRRANVMDYRECNLAEVPTHAVVVRPEKANKIRDLLER 610
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 12 ISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEV--IDCNNHVKSVINYFGPSCAVNAL 69
++ L+GK +C G+G AGW IP+ LI G +E I+ + ++V +F SC A
Sbjct: 106 VNDLQGKTSCHTGLGRSAGWNIPIGTLIHRGAIEWEGIESGSVEQAVAKFFSASCVPGAT 165
Query: 70 INKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQE 128
I + +LC C G P KC PY+G+ GAF CL D KG+VAF+KHTTV E
Sbjct: 166 IEQ---------KLCRQCKGD-PKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTVNE 215
Query: 129 MIEGRID 135
+ D
Sbjct: 216 NAPDQKD 222
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 8/60 (13%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF CL D KG+VAF+KHTTV E + D Y ELLC DG+RQPVDNY++CNW
Sbjct: 192 SGAFHCLKDGKGDVAFVKHTTVNENAPDQKDEY-------ELLCLDGSRQPVDNYKTCNW 244
>pdb|1N04|A Chain A, Diferric Chicken Serum Transferrin At 2.8 A Resolution.
pdb|1RYX|A Chain A, Crystal Structure Of Hen Serum Transferrin In Apo- Form
pdb|1AIV|A Chain A, Apo Ovotransferrin
pdb|1OVT|A Chain A, Refined Crystallographic Structure Of Hen Ovotransferrin
At 2.4 Angstroms Resolution
Length = 686
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 103/240 (42%), Gaps = 79/240 (32%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
++L+GKK+C VG AGWVIP+ ++ G CN YF CA
Sbjct: 446 NNLKGKKSCHTAVGRTAGWVIPMGLIHNRTGT----CN-----FDEYFSEGCA------- 489
Query: 73 YNPIGDNSDRLCELCIGR--VPGEKC--TTADPYAGFEGAFRCLVDKGEVAFLKHTTVQE 128
P + RLC+LC G +P EKC ++ + Y G+ GA RCLV+KG+VAF++H+TV+E
Sbjct: 490 --PGSPPNSRLCQLCQGSGGIPPEKCVASSHEKYFGYTGALRCLVEKGDVAFIQHSTVEE 547
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQE 188
G+ A K L+M F L
Sbjct: 548 NTGGKNKA----DWAKNLQMDDFELL---------------------------------- 569
Query: 189 MIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQ 248
CTDG R V +Y+ CN +VP++AV+ K+ +IR ++
Sbjct: 570 -------------------CTDGRRANVMDYRECNLAEVPTHAVVVRPEKANKIRDLLER 610
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 12 ISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEV--IDCNNHVKSVINYFGPSCAVNAL 69
++ L+GK +C G+G AGW IP+ L+ G +E I+ + ++V +F SC A
Sbjct: 106 VNDLQGKTSCHTGLGRSAGWNIPIGTLLHRGAIEWEGIESGSVEQAVAKFFSASCVPGAT 165
Query: 70 INKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQE 128
I + +LC C G P KC PY+G+ GAF CL D KG+VAF+KHTTV E
Sbjct: 166 IEQ---------KLCRQCKGD-PKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTVNE 215
Query: 129 MIEGRID 135
+ D
Sbjct: 216 NAPDQKD 222
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 8/60 (13%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF CL D KG+VAF+KHTTV E + D Y ELLC DG+RQPVDNY++CNW
Sbjct: 192 SGAFHCLKDGKGDVAFVKHTTVNENAPDQKDEY-------ELLCLDGSRQPVDNYKTCNW 244
>pdb|1IQ7|A Chain A, Ovotransferrin, C-Terminal Lobe, Apo Form
Length = 345
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 103/240 (42%), Gaps = 79/240 (32%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
++L+GKK+C VG AGWVIP+ ++ G CN YF CA
Sbjct: 105 NNLKGKKSCHTAVGRTAGWVIPMGLIHNRTGT----CN-----FDEYFSEGCA------- 148
Query: 73 YNPIGDNSDRLCELCIGR--VPGEKC--TTADPYAGFEGAFRCLVDKGEVAFLKHTTVQE 128
P + RLC+LC G +P EKC ++ + Y G+ GA RCLV+KG+VAF++H+TV+E
Sbjct: 149 --PGSPPNSRLCQLCQGSGGIPPEKCVASSHEKYFGYTGALRCLVEKGDVAFIQHSTVEE 206
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQE 188
G+ A K L+M F L
Sbjct: 207 NTGGKNKA----DWAKNLQMDDFELL---------------------------------- 228
Query: 189 MIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQ 248
CTDG R V +Y+ CN +VP++AV+ K+ +IR ++
Sbjct: 229 -------------------CTDGRRANVMDYRECNLAEVPTHAVVVRPEKANKIRDLLER 269
>pdb|1H76|A Chain A, The Crystal Structure Of Diferric Porcine Serum
Transferrin
Length = 696
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 108/265 (40%), Gaps = 84/265 (31%)
Query: 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYF 60
+KK+S PDL + ++L+GKK+C V AGW IP+ +L D +F
Sbjct: 437 VKKSSGPDL-NWNNLKGKKSCHTAVDRTAGWNIPMGLLYNKINSCKFD---------QFF 486
Query: 61 GPSCAVNALINKYNPIGDNSDRLCELCIG--RVPGEKC--TTADPYAGFEGAFRCLVDKG 116
G CA P + LC LCIG R PG +C + Y G+ GAFRCLV+KG
Sbjct: 487 GEGCA---------PGSQRNSSLCALCIGSERAPGRECLANNHERYYGYTGAFRCLVEKG 537
Query: 117 EVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKG 176
+VAF+K VQ+ +G+ K+LK F L
Sbjct: 538 DVAFVKDQVVQQNTDGK----NKDDWAKDLKQMDFELL---------------------- 571
Query: 177 EVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTS 236
C +G R+PVDN ++C+ + P++AV+
Sbjct: 572 -------------------------------CQNGAREPVDNAENCHLARAPNHAVVARD 600
Query: 237 AKSTQIRRYYQQFLIKTVQLFGGPV 261
K T + + L+K FG V
Sbjct: 601 DKVTCV----AEELLKQQAQFGRHV 621
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 115/269 (42%), Gaps = 86/269 (31%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRN--GGMEVIDCNNHVKSVINYFGPSCAVNALI 70
+ L+GK++C G+G AGW+IP+ +L + I+ K+V ++F SC A
Sbjct: 109 NQLQGKRSCHTGLGRSAGWIIPMGLLYDQLPEPRKPIE-----KAVASFFSSSCVPCA-- 161
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
+P+ N +LC+ C G+ GA +C E
Sbjct: 162 ---DPV--NFPKLCQQCAGK----------------GAEKCACSNHE------------- 187
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLV-DKGEVAFLKHTTVQEM 189
+F + GAF CL D G+VAF+KH+TV E
Sbjct: 188 ------------------PYFGY------------AGAFNCLKEDAGDVAFVKHSTVLEN 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQF 249
+ + D ++ +ELLC D TR+PVD+Y++C QVPS+AV+ S + + +
Sbjct: 218 LPDKAD-----RDQYELLCRDNTRRPVDDYENCYLAQVPSHAVVARSVDGQEDSIW--EL 270
Query: 250 LIKTVQLFGGPVPPQ-----RTQGKNVIL 273
L + + FG P + GK+++
Sbjct: 271 LNQAQEHFGRDKSPDFQLFSSSHGKDLLF 299
>pdb|1NFT|A Chain A, Ovotransferrin, N-Terminal Lobe, Iron Loaded Open Form
pdb|1TFA|A Chain A, Ovotransferrin, N-Terminal Lobe, Apo Form
Length = 329
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 12 ISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEV--IDCNNHVKSVINYFGPSCAVNAL 69
++ L+GK +C G+G AGW IP+ LI G +E I+ + ++V +F SC A
Sbjct: 103 VNDLQGKTSCHTGLGRSAGWNIPIGTLIHRGAIEWEGIESGSVEQAVAKFFSASCVPGAT 162
Query: 70 INKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQE 128
I + +LC C G P KC PY+G+ GAF CL D KG+VAF+KHTTV E
Sbjct: 163 IEQ---------KLCRQCKGD-PKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTVNE 212
Query: 129 MIEGRID 135
+ D
Sbjct: 213 NAPDQKD 219
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 8/60 (13%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF CL D KG+VAF+KHTTV E + D Y ELLC DG+RQPVDNY++CNW
Sbjct: 189 SGAFHCLKDGKGDVAFVKHTTVNENAPDQKDEY-------ELLCLDGSRQPVDNYKTCNW 241
>pdb|1IEJ|A Chain A, Ovotransferrin, N-Terminal Lobe, Holo Form, At 1.65 A
Resolution
Length = 332
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 12 ISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEV--IDCNNHVKSVINYFGPSCAVNAL 69
++ L+GK +C G+G AGW IP+ L+ G +E I+ + ++V +F SC A
Sbjct: 106 VNDLQGKTSCHTGLGRSAGWNIPIGTLLHRGAIEWEGIESGSVEQAVAKFFSASCVPGAT 165
Query: 70 INKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQE 128
I + +LC C G P KC PY+G+ GAF CL D KG+VAF+KHTTV E
Sbjct: 166 IEQ---------KLCRQCKGD-PKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTVNE 215
Query: 129 MIEGRID 135
+ D
Sbjct: 216 NAPDQKD 222
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 8/60 (13%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF CL D KG+VAF+KHTTV E + D Y ELLC DG+RQPVDNY++CNW
Sbjct: 192 SGAFHCLKDGKGDVAFVKHTTVNENAPDQKDEY-------ELLCLDGSRQPVDNYKTCNW 244
>pdb|1NNT|A Chain A, Structural Evidence For A Ph-Sensitive Di-Lysine Trigger
In The Hen Ovotransferrin N-Lobe: Implications For
Transferrin Iron Release
Length = 328
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 12 ISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEV--IDCNNHVKSVINYFGPSCAVNAL 69
++ L+GK +C G+G AGW IP+ L+ G +E I+ + ++V +F SC A
Sbjct: 102 VNDLQGKTSCHTGLGRSAGWNIPIGTLLHRGAIEWEGIESGSVEQAVAKFFSASCVPGAT 161
Query: 70 INKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQE 128
I + +LC C G P KC PY+G+ GAF CL D KG+VAF+KHTTV E
Sbjct: 162 IEQ---------KLCRQCKGD-PKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTVNE 211
Query: 129 MIEGRID 135
+ D
Sbjct: 212 NAPDQKD 218
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 8/60 (13%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF CL D KG+VAF+KHTTV E + D Y ELLC DG+RQPVDNY++CNW
Sbjct: 188 SGAFHCLKDGKGDVAFVKHTTVNENAPDQKDEY-------ELLCLDGSRQPVDNYKTCNW 240
>pdb|1GV8|A Chain A, 18 Kda Fragment Of N-Ii Domain Of Duck Ovotransferrin
Length = 159
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 65/120 (54%), Gaps = 13/120 (10%)
Query: 12 ISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEV--IDCNNHVKSVINYFGPSCAVNAL 69
I LRGK +C G+G AGW IP+ LI G +E I+ + ++V +F SC
Sbjct: 16 IKDLRGKTSCHTGLGRSAGWNIPIGTLIHRGDIEWEGIESGSVEQAVAKFFSASCV---- 71
Query: 70 INKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQE 128
P +LC C G KC PY+G+ GAF+CL D KG+VAF+KHTTVQE
Sbjct: 72 -----PGATTEQKLCRQCKGDAK-TKCLRNAPYSGYSGAFQCLKDGKGDVAFVKHTTVQE 125
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 8/65 (12%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D KG+VAF+KHTTVQE D Y ELLC DGTRQPVD+Y++CNW
Sbjct: 102 SGAFQCLKDGKGDVAFVKHTTVQENAPEEKDEY-------ELLCLDGTRQPVDSYKTCNW 154
Query: 225 GQVPS 229
+V +
Sbjct: 155 ARVAA 159
>pdb|1GVC|A Chain A, 18kda N-Ii Domain Fragment Of Duck Ovotransferrin + Nta
Length = 157
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 65/120 (54%), Gaps = 13/120 (10%)
Query: 12 ISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEV--IDCNNHVKSVINYFGPSCAVNAL 69
I LRGK +C G+G AGW IP+ LI G +E I+ + ++V +F SC
Sbjct: 16 IKDLRGKTSCHTGLGRSAGWNIPIGTLIHRGDIEWEGIESGSVEQAVAKFFSASCV---- 71
Query: 70 INKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQE 128
P +LC C G KC PY+G+ GAF+CL D KG+VAF+KHTTVQE
Sbjct: 72 -----PGATTEQKLCRQCKGDAK-TKCLRNAPYSGYSGAFQCLKDGKGDVAFVKHTTVQE 125
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 45/63 (71%), Gaps = 8/63 (12%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D KG+VAF+KHTTVQE D Y ELLC DGTRQPVD+Y++CNW
Sbjct: 102 SGAFQCLKDGKGDVAFVKHTTVQENAPEEKDEY-------ELLCLDGTRQPVDSYKTCNW 154
Query: 225 GQV 227
+V
Sbjct: 155 ARV 157
>pdb|1AOV|A Chain A, Apo Duck Ovotransferrin
pdb|1DOT|A Chain A, Crystallographic Structure Of Duck Ovotransferrin At 2.3
Angstroms Resolution
Length = 686
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 65/120 (54%), Gaps = 13/120 (10%)
Query: 12 ISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEV--IDCNNHVKSVINYFGPSCAVNAL 69
I LRGK +C G+G AGW IP+ LI +E I+ ++V +F SC A
Sbjct: 106 IKDLRGKTSCHTGLGRSAGWNIPIGTLIHREDIEWEGIESGISEQAVAKFFSASCVPGAT 165
Query: 70 INKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQE 128
I + +LC C G KC PY+G+ GAF+CL D KG+VAF+KHTTVQE
Sbjct: 166 IEQ---------KLCRQCKGDAK-TKCLRNGPYSGYSGAFQCLKDGKGDVAFVKHTTVQE 215
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 64/96 (66%), Gaps = 7/96 (7%)
Query: 166 TGAFRCLVDKGEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQSC 222
TGA RCLV++G+VAF+KH+TV E + G A GLT+++FELLCT+G R +Y++C
Sbjct: 525 TGALRCLVEQGDVAFIKHSTVGENVSGSNKDDWAKGLTRDDFELLCTNGKRAKTMDYKTC 584
Query: 223 NWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFG 258
+ +VP++AV+ K+ +IR + L +LFG
Sbjct: 585 HLAKVPTHAVVARPEKANKIR----ELLEGQEKLFG 616
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 22/124 (17%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
++L+GKK+C VG AGW IP+ ++ G D +YF CA
Sbjct: 446 NNLQGKKSCHTAVGRTAGWNIPMGLIHNKTGSCDFD---------DYFSEGCA------- 489
Query: 73 YNPIGDNSDRLCELCIGRVPG--EKC--TTADPYAGFEGAFRCLVDKGEVAFLKHTTVQE 128
P + RLC+LC G EKC ++ + Y G+ GA RCLV++G+VAF+KH+TV E
Sbjct: 490 --PGSPPNSRLCKLCQGSGENLLEKCVASSHEKYYGYTGALRCLVEQGDVAFIKHSTVGE 547
Query: 129 MIEG 132
+ G
Sbjct: 548 NVSG 551
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 8/60 (13%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D KG+VAF+KHTTVQE D Y ELLC DG+RQPVD+Y++CNW
Sbjct: 192 SGAFQCLKDGKGDVAFVKHTTVQENAPEEKDEY-------ELLCLDGSRQPVDSYKTCNW 244
>pdb|1OVB|A Chain A, The Mechanism Of Iron Uptake By Transferrins: The
Structure Of An 18kd Nii-Domain Fragment At 2.3
Angstroms Resolution
Length = 159
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 66/120 (55%), Gaps = 13/120 (10%)
Query: 12 ISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEV--IDCNNHVKSVINYFGPSCAVNAL 69
I LRGK +C G+G AGW IP+ LI +E I+ + ++V +F SC A
Sbjct: 16 IKDLRGKTSCHTGLGRSAGWNIPIGTLIHREDIEWEGIESGSVEQAVAKFFSASCVPGAT 75
Query: 70 INKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQE 128
I + +LC C G KC PY+G+ GAF+CL D KG+VAF+KHTTVQE
Sbjct: 76 IEQ---------KLCRQCKGDAK-TKCLRNAPYSGYSGAFQCLKDGKGDVAFVKHTTVQE 125
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 8/65 (12%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D KG+VAF+KHTTVQE D Y ELLC DG+RQPVD+Y++CNW
Sbjct: 102 SGAFQCLKDGKGDVAFVKHTTVQENAPEEKDEY-------ELLCLDGSRQPVDSYKTCNW 154
Query: 225 GQVPS 229
+V +
Sbjct: 155 ARVAA 159
>pdb|1OQH|A Chain A, Crystal Structure Of The R124a Mutant Of The N-lobe Human
Transferrin
Length = 337
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGASAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|1SUV|C Chain C, Structure Of Human Transferrin Receptor-transferrin
Complex
pdb|1SUV|D Chain D, Structure Of Human Transferrin Receptor-transferrin
Complex
pdb|1A8E|A Chain A, Human Serum Transferrin, Recombinant N-Terminal Lobe
pdb|1A8F|A Chain A, Human Serum Transferrin, Recombinant N-Terminal Lobe
Length = 329
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 106 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 157
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 158 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 208
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 209 FENLANKADRDQYELL 224
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 187 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 241
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 242 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 286
>pdb|1JQF|A Chain A, Human Transferrin N-Lobe Mutant H249q
Length = 334
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSQTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|1RYO|A Chain A, Human Serum Transferrin, N-Lobe Bound With Oxalate
Length = 327
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|1N7X|A Chain A, Human Serum Transferrin, N-Lobe Y45e Mutant
Length = 331
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|1FQF|A Chain A, Crystal Structures Of Mutant (K296a) That Abolish The
Dilysine Interaction In The N-Lobe Of Human Transferrin
Length = 331
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|1N84|A Chain A, Human Serum Transferrin, N-Lobe
Length = 331
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|1N7W|A Chain A, Crystal Structure Of Human Serum Transferrin, N-Lobe L66w
Mutant
Length = 331
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|1OQG|A Chain A, Crystal Structure Of The D63e Mutant Of The N-Lobe Human
Transferrin
Length = 337
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|1BP5|A Chain A, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form
pdb|1BP5|B Chain B, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form
pdb|1BP5|C Chain C, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form
pdb|1BP5|D Chain D, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form
pdb|1BTJ|A Chain A, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form, Crystal Form 2
pdb|1BTJ|B Chain B, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form, Crystal Form 2
Length = 337
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|2HAV|A Chain A, Apo-Human Serum Transferrin (Glycosylated)
pdb|2HAV|B Chain B, Apo-Human Serum Transferrin (Glycosylated)
Length = 676
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 105 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 156
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 157 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 207
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 208 FENLANKADRDQYELL 223
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 166 TGAFRCLVDKGEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQSC 222
TGAFRCLV+KG+VAF+KH TV + G+ A L ++++ELLC DGTR+PV+ Y +C
Sbjct: 515 TGAFRCLVEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANC 574
Query: 223 NWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFGGPV 261
+ + P++AV+T K + + +Q LFG V
Sbjct: 575 HLARAPNHAVVTRKDKEACVHKILRQ----QQHLFGSNV 609
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 186 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 240
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 241 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 285
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 66/136 (48%), Gaps = 28/136 (20%)
Query: 3 KNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGP 62
K S DLT +L+GKK+C VG AGW IP+ +L NH + +F
Sbjct: 430 KKSASDLT-WDNLKGKKSCHTAVGRTAGWNIPMGLLYNK--------INHCR-FDEFFSE 479
Query: 63 SCAVNALINKYNPIGDNSDRLCELCIGR-----VPGEKCTTADPYAGFEGAFRCLVDKGE 117
CA P LC+LC+G P K + Y G+ GAFRCLV+KG+
Sbjct: 480 GCA---------PGSKKDSSLCKLCMGSGLNLCEPNNK----EGYYGYTGAFRCLVEKGD 526
Query: 118 VAFLKHTTVQEMIEGR 133
VAF+KH TV + G+
Sbjct: 527 VAFVKHQTVPQNTGGK 542
>pdb|3QYT|A Chain A, Diferric Bound Human Serum Transferrin
Length = 679
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 166 TGAFRCLVDKGEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQSC 222
TGAFRCLV+KG+VAF+KH TV + G+ A L ++++ELLC DGTR+PV+ Y +C
Sbjct: 518 TGAFRCLVEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANC 577
Query: 223 NWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFGGPV 261
+ + P++AV+T K + + +Q LFG V
Sbjct: 578 HLARAPNHAVVTRKDKEACVHKILRQ----QQHLFGSNV 612
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 66/136 (48%), Gaps = 28/136 (20%)
Query: 3 KNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGP 62
K S DLT +L+GKK+C VG AGW IP+ +L NH + +F
Sbjct: 433 KKSASDLT-WDNLKGKKSCHTAVGRTAGWNIPMGLLYNK--------INHCR-FDEFFSE 482
Query: 63 SCAVNALINKYNPIGDNSDRLCELCIGR-----VPGEKCTTADPYAGFEGAFRCLVDKGE 117
CA P LC+LC+G P K + Y G+ GAFRCLV+KG+
Sbjct: 483 GCA---------PGSKKDSSLCKLCMGSGLNLCEPNNK----EGYYGYTGAFRCLVEKGD 529
Query: 118 VAFLKHTTVQEMIEGR 133
VAF+KH TV + G+
Sbjct: 530 VAFVKHQTVPQNTGGK 545
>pdb|4H0W|A Chain A, Bismuth Bound Human Serum Transferrin
Length = 679
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 166 TGAFRCLVDKGEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQSC 222
TGAFRCLV+KG+VAF+KH TV + G+ A L ++++ELLC DGTR+PV+ Y +C
Sbjct: 518 TGAFRCLVEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANC 577
Query: 223 NWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFGGPV 261
+ + P++AV+T K + + +Q LFG V
Sbjct: 578 HLARAPNHAVVTRKDKEACVHKILRQ----QQHLFGSNV 612
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 66/136 (48%), Gaps = 28/136 (20%)
Query: 3 KNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGP 62
K S DLT +L+GKK+C VG AGW IP+ +L NH + +F
Sbjct: 433 KKSASDLT-WDNLKGKKSCHTAVGRTAGWNIPMGLLYNK--------INHCR-FDEFFSE 482
Query: 63 SCAVNALINKYNPIGDNSDRLCELCIGR-----VPGEKCTTADPYAGFEGAFRCLVDKGE 117
CA P LC+LC+G P K + Y G+ GAFRCLV+KG+
Sbjct: 483 GCA---------PGSKKDSSLCKLCMGSGLNLCEPNNK----EGYYGYTGAFRCLVEKGD 529
Query: 118 VAFLKHTTVQEMIEGR 133
VAF+KH TV + G+
Sbjct: 530 VAFVKHQTVPQNTGGK 545
>pdb|3VE1|B Chain B, The 2.9 Angstrom Crystal Structure Of Transferrin Binding
Protein B (Tbpb) From Serogroup B M982 Neisseria
Meningitidis In Complex With Human Transferrin
pdb|3VE1|D Chain D, The 2.9 Angstrom Crystal Structure Of Transferrin Binding
Protein B (Tbpb) From Serogroup B M982 Neisseria
Meningitidis In Complex With Human Transferrin
Length = 679
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 166 TGAFRCLVDKGEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQSC 222
TGAFRCLV+KG+VAF+KH TV + G+ A L ++++ELLC DGTR+PV+ Y +C
Sbjct: 518 TGAFRCLVEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANC 577
Query: 223 NWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFGGPV 261
+ + P++AV+T K + + +Q LFG V
Sbjct: 578 HLARAPNHAVVTRKDKEACVHKILRQ----QQHLFGSDV 612
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 66/136 (48%), Gaps = 28/136 (20%)
Query: 3 KNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGP 62
K S DLT +L+GKK+C VG AGW IP+ +L NH + +F
Sbjct: 433 KKSASDLT-WDNLKGKKSCHTAVGRTAGWNIPMGLLYNK--------INHCR-FDEFFSE 482
Query: 63 SCAVNALINKYNPIGDNSDRLCELCIGR-----VPGEKCTTADPYAGFEGAFRCLVDKGE 117
CA P LC+LC+G P K + Y G+ GAFRCLV+KG+
Sbjct: 483 GCA---------PGSKKDSSLCKLCMGSGLNLCEPNNK----EGYYGYTGAFRCLVEKGD 529
Query: 118 VAFLKHTTVQEMIEGR 133
VAF+KH TV + G+
Sbjct: 530 VAFVKHQTVPQNTGGK 545
>pdb|3V83|A Chain A, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|B Chain B, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|C Chain C, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|D Chain D, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|E Chain E, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|F Chain F, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V8X|B Chain B, The Crystal Structure Of Transferrin Binding Protein A
(Tbpa) From Neisserial Meningitidis Serogroup B In
Complex With Full Length Human Transferrin
Length = 698
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 127 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 178
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 179 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 229
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 230 FENLANKADRDQYELL 245
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 166 TGAFRCLVDKGEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQSC 222
TGAFRCLV+KG+VAF+KH TV + G+ A L ++++ELLC DGTR+PV+ Y +C
Sbjct: 537 TGAFRCLVEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANC 596
Query: 223 NWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFGGPV 261
+ + P++AV+T K + + +Q LFG V
Sbjct: 597 HLARAPNHAVVTRKDKEACVHKILRQ----QQHLFGSNV 631
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 208 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 262
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 263 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 307
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 66/136 (48%), Gaps = 28/136 (20%)
Query: 3 KNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGP 62
K S DLT +L+GKK+C VG AGW IP+ +L NH + +F
Sbjct: 452 KKSASDLT-WDNLKGKKSCHTAVGRTAGWNIPMGLLYNK--------INHCR-FDEFFSE 501
Query: 63 SCAVNALINKYNPIGDNSDRLCELCIGR-----VPGEKCTTADPYAGFEGAFRCLVDKGE 117
CA P LC+LC+G P K + Y G+ GAFRCLV+KG+
Sbjct: 502 GCA---------PGSKKDSSLCKLCMGSGLNLCEPNNK----EGYYGYTGAFRCLVEKGD 548
Query: 118 VAFLKHTTVQEMIEGR 133
VAF+KH TV + G+
Sbjct: 549 VAFVKHQTVPQNTGGK 564
>pdb|1DTG|A Chain A, Human Transferrin N-Lobe Mutant H249e
Length = 334
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D Y L
Sbjct: 211 FENLANKADRDNYELL 226
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++N+ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDNYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSETVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|1B3E|A Chain A, Human Serum Transferrin, N-Terminal Lobe, Expressed In
Pichia Pastoris
Length = 330
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 105 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 156
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 157 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 207
Query: 127 QEMIEGRIDACKYSFL 142
E + + D Y L
Sbjct: 208 FENLANKADRDNYELL 223
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++N+ELLC D TR+PVD Y+ C+
Sbjct: 186 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDNYELLCLDNTRKPVDEYKDCHL 240
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 241 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 285
>pdb|3S9L|C Chain C, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Cryocooled 2
pdb|3S9L|D Chain D, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Cryocooled 2
pdb|3S9M|C Chain C, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Cryocooled 1
pdb|3S9M|D Chain D, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Cryocooled 1
pdb|3S9N|C Chain C, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Room Temperature
pdb|3S9N|D Chain D, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Room Temperature
Length = 693
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 122 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 173
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+
Sbjct: 174 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTI 224
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 225 FENLANKADRDQYELL 240
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 166 TGAFRCLVDKGEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQSC 222
TGAFRCLV+KG+VAF+KH TV + G+ A L ++++ELLC DGTR+PV+ Y +C
Sbjct: 532 TGAFRCLVEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANC 591
Query: 223 NWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFGGPV 261
+ + P++AV+T K + + +Q LFG V
Sbjct: 592 HLARAPNHAVVTRKDKEACVHKILRQ----QQHLFGSDV 626
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 203 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 257
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 258 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 302
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 66/136 (48%), Gaps = 28/136 (20%)
Query: 3 KNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGP 62
K S DLT +L+GKK+C VG AGW IP+ +L NH + +F
Sbjct: 447 KKSASDLT-WDNLKGKKSCHTAVGRTAGWNIPMGLLYNK--------INHCR-FDEFFSE 496
Query: 63 SCAVNALINKYNPIGDNSDRLCELCIGR-----VPGEKCTTADPYAGFEGAFRCLVDKGE 117
CA P LC+LC+G P K + Y GF GAFRCLV+KG+
Sbjct: 497 GCA---------PGSKKDSSLCKLCMGSGLNLCEPNNK----EGYYGFTGAFRCLVEKGD 543
Query: 118 VAFLKHTTVQEMIEGR 133
VAF+KH TV + G+
Sbjct: 544 VAFVKHQTVPQNTGGK 559
>pdb|1D3K|A Chain A, Human Serum Transferrin
Length = 329
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 106 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 157
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF++H+T+
Sbjct: 158 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVQHSTI 208
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 209 FENLANKADRDQYELL 224
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF++H+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 187 SGAFKCLKDGAGDVAFVQHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 241
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 242 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 286
>pdb|2HAU|A Chain A, Apo-Human Serum Transferrin (Non-Glycosylated)
pdb|2HAU|B Chain B, Apo-Human Serum Transferrin (Non-Glycosylated)
Length = 676
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 21/134 (15%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNALIN 71
+ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 107 NQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA------ 156
Query: 72 KYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQE 128
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+ E
Sbjct: 157 ---PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFE 209
Query: 129 MIEGRIDACKYSFL 142
+ + D +Y L
Sbjct: 210 NLANKADRDQYELL 223
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 166 TGAFRCLVDKGEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQSC 222
TGAFRCLV+KG+VAF+KH TV + G+ A L ++++ELLC DGTR+PV+ Y +C
Sbjct: 515 TGAFRCLVEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANC 574
Query: 223 NWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFGGPV 261
+ + P++AV+T K + + +Q LFG V
Sbjct: 575 HLARAPNHAVVTRKDKEACVHKILRQ----QQHLFGSDV 609
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 186 SGAFKCLKDGAGDVAFVKHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 240
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 241 AQVPSHTVVARSXGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 285
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 64/136 (47%), Gaps = 28/136 (20%)
Query: 3 KNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGP 62
K S DLT +L+GKK+C VG AGW IP +L NH + +F
Sbjct: 430 KKSASDLT-WDNLKGKKSCHTAVGRTAGWNIPXGLLYNK--------INHCR-FDEFFSE 479
Query: 63 SCAVNALINKYNPIGDNSDRLCELCIGR-----VPGEKCTTADPYAGFEGAFRCLVDKGE 117
CA P LC+LC G P K + Y G+ GAFRCLV+KG+
Sbjct: 480 GCA---------PGSKKDSSLCKLCXGSGLNLCEPNNK----EGYYGYTGAFRCLVEKGD 526
Query: 118 VAFLKHTTVQEMIEGR 133
VAF+KH TV + G+
Sbjct: 527 VAFVKHQTVPQNTGGK 542
>pdb|3FGS|A Chain A, Crystal Structure Of G65rK206E DOUBLE MUTANT OF THE N-Lobe
Human Transferrin
Length = 337
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF++H+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVEHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF++H+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVEHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|2O7U|B Chain B, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|A Chain A, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|C Chain C, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|D Chain D, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|E Chain E, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|F Chain F, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|G Chain G, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|H Chain H, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|I Chain I, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
Length = 337
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF++H+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVEHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF++H+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVEHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|2O84|X Chain X, Crystal Structure Of K206e Mutant Of N-Lobe Human
Transferrin
Length = 337
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF++H+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVEHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF++H+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVEHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|1FQE|A Chain A, Crystal Structures Of Mutant (K206a) That Abolish The
Dilysine Interaction In The N-Lobe Of Human Transferrin
Length = 331
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 108 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+ H+T+
Sbjct: 160 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVAHSTI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 211 FENLANKADRDQYELL 226
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+ H+T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGAGDVAFVAHSTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 244 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 288
>pdb|3V89|B Chain B, The Crystal Structure Of Transferrin Binding Protein A
(Tbpa) From Neisseria Meningitidis Serogroup B In
Complex With The C-Lobe Of Human Transferrin
Length = 343
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 166 TGAFRCLVDKGEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQSC 222
TGAFRCLV+KG+VAF+KH TV + G+ A L ++++ELLC DGTR+PV+ Y +C
Sbjct: 182 TGAFRCLVEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANC 241
Query: 223 NWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFGGPV 261
+ + P++AV+T K + + +Q LFG V
Sbjct: 242 HLARAPNHAVVTRKDKEACVHKILRQ----QQHLFGSNV 276
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 66/136 (48%), Gaps = 28/136 (20%)
Query: 3 KNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGP 62
K S DLT +L+GKK+C VG AGW IP+ +L NH + +F
Sbjct: 97 KKSASDLT-WDNLKGKKSCHTAVGRTAGWNIPMGLLYNKI--------NHCR-FDEFFSE 146
Query: 63 SCAVNALINKYNPIGDNSDRLCELCIGR-----VPGEKCTTADPYAGFEGAFRCLVDKGE 117
CA P LC+LC+G P K + Y G+ GAFRCLV+KG+
Sbjct: 147 GCA---------PGSKKDSSLCKLCMGSGLNLCEPNNK----EGYYGYTGAFRCLVEKGD 193
Query: 118 VAFLKHTTVQEMIEGR 133
VAF+KH TV + G+
Sbjct: 194 VAFVKHQTVPQNTGGK 209
>pdb|3SKP|A Chain A, The Structure Of Apo-Human Transferrin C-Lobe With Bound
Sulfate Ions
Length = 342
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 166 TGAFRCLVDKGEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQSC 222
TGAFRCLV+KG+VAF+KH TV + G+ A L ++++ELLC DGTR+PV+ Y +C
Sbjct: 181 TGAFRCLVEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANC 240
Query: 223 NWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFGGPV 261
+ + P++AV+T K + + +Q LFG V
Sbjct: 241 HLARAPNHAVVTRKDKEACVHKILRQ----QQHLFGSNV 275
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 66/136 (48%), Gaps = 28/136 (20%)
Query: 3 KNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGP 62
K S DLT +L+GKK+C VG AGW IP+ +L NH + +F
Sbjct: 96 KKSASDLT-WDNLKGKKSCHTAVGRTAGWNIPMGLLYNK--------INHCR-FDEFFSE 145
Query: 63 SCAVNALINKYNPIGDNSDRLCELCIGR-----VPGEKCTTADPYAGFEGAFRCLVDKGE 117
CA P LC+LC+G P K + Y G+ GAFRCLV+KG+
Sbjct: 146 GCA---------PGSKKDSSLCKLCMGSGLNLCEPNNK----EGYYGYTGAFRCLVEKGD 192
Query: 118 VAFLKHTTVQEMIEGR 133
VAF+KH TV + G+
Sbjct: 193 VAFVKHQTVPQNTGGK 208
>pdb|1D4N|A Chain A, Human Serum Transferrin
Length = 329
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L ++ + + K+V N+F SCA
Sbjct: 106 QMNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCA---- 157
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTV 126
P D +D +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+K +T+
Sbjct: 158 -----PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKESTI 208
Query: 127 QEMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 209 FENLANKADRDQYELL 224
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+K +T+ E + + D ++ +ELLC D TR+PVD Y+ C+
Sbjct: 187 SGAFKCLKDGAGDVAFVKESTIFENLANKAD-----RDQYELLCLDNTRKPVDEYKDCHL 241
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGP 260
QVPS+ V+ S Q + ++ + K QLF P
Sbjct: 242 AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP 286
>pdb|1SDX|A Chain A, Crystal Structure Of The Zinc Saturated C-Terminal Half Of
Bovine Lactoferrin At 2.0 A Resolution Reveals Two
Additional Zinc Binding Sites
pdb|3TOD|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With 1- Butyl-1h-Pyrazole-5-Carboxylic Acid At
1.38 A Resolution
pdb|3U72|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Isoniazid At 2.2 A Resolution
pdb|3U8Q|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Phenyl-Propanolamine At 1.97 A Resolution
pdb|3UGW|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Deoxycytidine At 1.87 A Resolution
pdb|3UK4|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With 1,2, 5-Pentanetriol At 1.98 A Resolution
pdb|3USD|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Imidazol (1,2 A) Pyridine3-Yl-Acitic Acid
At 2.4 A Resolution
pdb|3V5A|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Gamma Amino Butyric Acid At 1.44 A
Resolution
pdb|3VDF|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Diaminopimelic Acid At 1.46 A Resolution
pdb|4DIG|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With N- Acetylmuramyl L-Alanyl D-Isoglutamine
At 1.8 A Resolution
pdb|4DXU|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Aminocaproic Acid At 1.46 A Resolution
pdb|4FIM|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Celecoxib Acid At 1.80 A Resolution
pdb|4FJP|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Naproxen At 1.68 A Resolution
pdb|4FOR|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Flurbiprofen At 1.58 A Resolution
pdb|4G2Z|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Mefenamic Acid At 1.90 A Resolution
pdb|4GRK|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Ketorolac At 1.68 A Resolution
Length = 335
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 95/248 (38%), Gaps = 83/248 (33%)
Query: 15 LRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYN 74
L+ KK+C V AGW IP+ +++ G D +F SCA
Sbjct: 110 LKDKKSCHTAVDRTAGWNIPMGLIVNQTGSCAFD---------EFFSQSCA--------- 151
Query: 75 PIGDNSDRLCELCIGRVPG-EKC--TTADPYAGFEGAFRCLV-DKGEVAFLKHTTVQEMI 130
P D RLC LC G G +KC + + Y G+ GAFRCL D G+VAF+K+ TV E
Sbjct: 152 PGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDTVWENT 211
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMI 190
G A K LK F L L
Sbjct: 212 NGESTA----DWAKNLKREDFRLLCL---------------------------------- 233
Query: 191 EGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQFL 250
DGTR+PV QSC+ P++AV++ S ++ + +Q L
Sbjct: 234 -------------------DGTRKPVTEAQSCHLAVAPNHAVVSRSDRAAHV----EQVL 270
Query: 251 IKTVQLFG 258
+ LFG
Sbjct: 271 LHQQALFG 278
>pdb|1NKX|A Chain A, Crystal Structure Of A Proteolytically Generated
Functional Monoferric C-Lobe Of Bovine Lactoferrin At
1.9a Resolution
pdb|2ALU|A Chain A, Detection Of New Binding Site In The C-Terminal Lobe Of
Lactoferrin:crystal Structure Of The Complex Formed
Between Bovine Lactoferrin And A Tetrasaccharide At 2.1a
Resolution
pdb|2AYS|A Chain A, A Conserved Non-Metallic Binding Site In The C-Terminal
Lobe Of Lactoferrin: Structure Of The Complex Of
C-Terminal Lobe Of Bovine Lactoferrin With N-Acetyl
Galactosamine At 1.86 A Resolution
pdb|2Q8J|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Bovine
Lactoferrin With Mannitol And Mannose At 2.7 A
Resolution
pdb|2QJE|A Chain A, Crystal Structure Of The Complex Of Bovine C-Lobe With
Amygdalin At 2.3a Resolution
Length = 348
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 95/248 (38%), Gaps = 83/248 (33%)
Query: 15 LRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYN 74
L+ KK+C V AGW IP+ +++ G D +F SCA
Sbjct: 110 LKDKKSCHTAVDRTAGWNIPMGLIVNQTGSCAFD---------EFFSQSCA--------- 151
Query: 75 PIGDNSDRLCELCIGRVPG-EKC--TTADPYAGFEGAFRCLV-DKGEVAFLKHTTVQEMI 130
P D RLC LC G G +KC + + Y G+ GAFRCL D G+VAF+K+ TV E
Sbjct: 152 PGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDTVWENT 211
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMI 190
G A K LK F L L
Sbjct: 212 NGESTA----DWAKNLKREDFRLLCL---------------------------------- 233
Query: 191 EGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQFL 250
DGTR+PV QSC+ P++AV++ S ++ + +Q L
Sbjct: 234 -------------------DGTRKPVTEAQSCHLAVAPNHAVVSRSDRAAHV----EQVL 270
Query: 251 IKTVQLFG 258
+ LFG
Sbjct: 271 LHQQALFG 278
>pdb|2P1S|A Chain A, Crystal Structure Of The C-Terminal Lobe Of Bovine
Lactoferrin Complexed With O-Alpha-D-Glucopyranosyl-(1
3)-Alpha-D- Fructofuranosyl- (2 1)-
Alpha-D-Glucopyranoside At 1.93 A Resolution
Length = 344
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 95/248 (38%), Gaps = 83/248 (33%)
Query: 15 LRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYN 74
L+ KK+C V AGW IP+ +++ G D +F SCA
Sbjct: 110 LKDKKSCHTAVDRTAGWNIPMGLIVNQTGSCAFD---------EFFSQSCA--------- 151
Query: 75 PIGDNSDRLCELCIGRVPG-EKC--TTADPYAGFEGAFRCLV-DKGEVAFLKHTTVQEMI 130
P D RLC LC G G +KC + + Y G+ GAFRCL D G+VAF+K+ TV E
Sbjct: 152 PGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDTVWENT 211
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMI 190
G A K LK F L L
Sbjct: 212 NGESTA----DWAKNLKREDFRLLCL---------------------------------- 233
Query: 191 EGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQFL 250
DGTR+PV QSC+ P++AV++ S ++ + +Q L
Sbjct: 234 -------------------DGTRKPVTEAQSCHLAVAPNHAVVSRSDRAAHV----EQVL 270
Query: 251 IKTVQLFG 258
+ LFG
Sbjct: 271 LHQQALFG 278
>pdb|2B65|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Bovine
Lactoferrin With Maltose At 1.5a Resolution
pdb|2FA7|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoferrin
C-Lobe With A Pentasaccharide At 2.38 A Resolution
pdb|2DOJ|A Chain A, Crystal Structure Of The Complex Of C-Terminal Lobe Of
Bovine Lactoferrin With Adenosine At 2.4 A Resolution
pdb|2DP8|A Chain A, Carbohydrate Recognition By Lactoferrin: Crystal Structure
Of The Complex Of C-Terminal Lobe Of Bovine Lactoferrin
With Trisaccharide At 2.5 A Resolution
pdb|2G93|A Chain A, Ligand Recognition Site In C-Lobe Of Lactoferrin: Crystal
Structure Of The Complex Of C-Lobe Of Bovine Lactoferrin
With Methyl Alpha-D- Mannopyranoside At 1.9 A Resolution
pdb|2H4I|A Chain A, Crystal Structure Of The Complex Of Proteolytically
Produced C- Terminal Half Of Bovine Lactoferrin With
Lactose At 2.55 A Resolution
pdb|2HCA|A Chain A, Crystal Structure Of Bovine Lactoferrin C-Lobe Liganded
With Glucose At 2.8 A Resolution
pdb|2DQV|A Chain A, Structure Of The C-Terminal Lobe Of Bovine Lactoferrin In
Complex With Galactose At 2.7 A Resolution
pdb|2DS9|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Mannose At 2.8 A Resolution
pdb|2DSF|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Xylose At 2.8a Resolution
pdb|2DVC|A Chain A, Structure Of The Bovine Lactoferrin C-Lobe Complex With
Sucrose At 3.0 A Resolution
pdb|2DWA|A Chain A, Structure Of The Complex Of Lactoferrin C-Terminal Half
With Fucose At 2.07 A Resolution
pdb|2DWH|A Chain A, Crystal Structure Of N-Acetylglucosamine Complex Of Bovine
Lactoferrin C-Lobe At 2.8 A Resolution
pdb|2DWI|A Chain A, Crystal Structure Of The Complex Formed Between C-Terminal
Half Of Bovine Lactoferrin And Cellobiose At 2.2 A
Resolution
pdb|2DWJ|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Raffinose At 2.3 A Resolution
pdb|2DXR|A Chain A, Crystal Structure Of The Complex Formed Between C-Terminal
Half Of Bovine Lactoferrin And Sorbitol At 2.85 A
Resolution
pdb|2DXY|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Trehalose At 2.0 A Resolution
pdb|2DYX|A Chain A, Structure Of The Complex Of Lactoferrin C-lobe With
Melibiose At 2.0 A Resolution
pdb|2E0S|A Chain A, Carbohydrate Recognition Of C-Terminal Half Of
Lactoferrin: Crystal Structure Of The Complex Of C-Lobe
With Rhamnose At 2.15 A Resolution
pdb|2E1S|A Chain A, Crystal Structure Of The Complex Of C-Terminal Half Of
Bovine Lactoferrin And Arabinose At 2.7 A Resolution
pdb|2NWJ|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Disaccharide At 1.75 A Resolution
pdb|2NUV|A Chain A, Crystal Structure Of The Complex Of C-Terminal Lobe Of
Bovine Lactoferrin With Atenolol At 2.25 A Resolution
pdb|2O1L|A Chain A, Structure Of A Complex Of C-terminal Lobe Of Bovine
Lactoferrin With Disaccharide At 1.97 A Resolution
pdb|2O51|A Chain A, Crystal Structure Of Bovine C-Lobe With Fructose At 3.0 A
Resolution
pdb|2OCU|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With N-(4-Hydroxyphenyl) Acetamide At 2.38 A
Resolution
pdb|2PX1|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoferrin
C-Lobe With Ribose At 2.5 A Resolution
pdb|2R71|A Chain A, Crystal Structure Of The Complex Of Bovine C-lobe With
Inositol At 2.1a Resolution
pdb|2R9J|A Chain A, Ligand Recognition In C-Lobe: The Crystal Structure Of The
Complex Of Lactoferrin C-Lobe With Nicotinamide At 2.5 A
Resolution
pdb|3CFL|A Chain A, Crystal Structure Of The Complex Formed Between C-lobe Of
Bovine Lactoferrin And
5-chloro-6'-methyl-3-[4-(methylsulfonyl)phenyl]-2,3'-
Bipyridine At 2.25 A Resolution
pdb|3CI8|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Lactoferrin
With Vitamin B3 (Niacin) At 2.4 A Resolution
pdb|3CRB|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Lactoferrin
With 2- Chromenone At 2.6 A Resolution
pdb|2ZMB|A Chain A, Crystal Structure Of The Complex Of C-Terminal Lobe Of
Bovine Lactoferrin With Parecoxib At 2.9 A Resolution
pdb|3E9X|A Chain A, Crystal Structure Of The Complex Of C-lobe Of Lactoferrin
With Nimesulide At 2.7 A Resolution
pdb|3IB2|A Chain A, Structure Of The Complex Of C-Terminal Half (C-Lobe) Of
Bovine Lactoferrin With Alpha-Methyl-4-(2-Methylpropyl)
Benzene Acetic Acid
pdb|3IAZ|A Chain A, Structural Basis Of The Prevention Of Nsaid-induced Damage
Of The Gastrointestinal Tract By C-terminal Half
(c-lobe) Of Bovine Colostrum Protein Lactoferrin:
Binding And Structural Studies Of The C-lobe Complex
With Aspirin
pdb|3IB0|A Chain A, Structural Basis Of The Prevention Of Nsaid-Induced Damage
Of The Gastrointestinal Tract By C-Terminal Half
(C-Lobe) Of Bovine Colostrum Protein Lactoferrin:
Binding And Structural Studies Of C- Lobe Complex With
Diclofenac
pdb|3IB1|A Chain A, Structural Basis Of The Prevention Of Nsaid-Induced Damage
Of The Gastrointestinal Tract By C-Terminal Half
(C-Lobe) Of Bovine Colostrum Protein Lactoferrin:
Binding And Structural Studies Of C- Lobe Complex With
Indomethacin
pdb|3K0V|A Chain A, Removal Of Sugars And Sugars-Like Molecules From The
Solution By C- Lobe Of Lactoferrin: Crystal Structure Of
The Complex Of C-Lobe With
Beta-D-Glucopyranosyl-(1->4)-Beta-D-Galactopyranosyl-(1-
>4)-Alpha-D- Glucopyranose At 1.9 A Resolution
pdb|3KJ7|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Bovine
Lactoferrin With Dextrin At 1.9 A Resolution
pdb|3MJN|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Lactoferrin
With Isopropylamino-3-(1-Naphthyloxy)propan-2-Ol At 2.38
A Resolution
pdb|3O97|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Lactoferrin
With Indole Acetic Acid At 2.68 A Resolution
pdb|3RGY|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Lipopolysaccharide At 2.0 A Resolution
pdb|3SDF|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Lipoteichoic Acid At 2.1 A Resolution
pdb|3TAJ|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Nabumetone At 1.7a Resolution
pdb|3TTR|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Lidocaine At 2.27 A Resolution
pdb|3TUS|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Meta- Hydroxy Benzoic Acid At 2.5 A
Resolution
pdb|4G77|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Tolfenamic Acid At 1.98 A Resolution
pdb|4G8H|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Licofelone At 1.88 A Resolution
Length = 345
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 95/248 (38%), Gaps = 83/248 (33%)
Query: 15 LRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYN 74
L+ KK+C V AGW IP+ +++ G D +F SCA
Sbjct: 110 LKDKKSCHTAVDRTAGWNIPMGLIVNQTGSCAFD---------EFFSQSCA--------- 151
Query: 75 PIGDNSDRLCELCIGRVPG-EKC--TTADPYAGFEGAFRCLV-DKGEVAFLKHTTVQEMI 130
P D RLC LC G G +KC + + Y G+ GAFRCL D G+VAF+K+ TV E
Sbjct: 152 PGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDTVWENT 211
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMI 190
G A K LK F L L
Sbjct: 212 NGESTA----DWAKNLKREDFRLLCL---------------------------------- 233
Query: 191 EGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQFL 250
DGTR+PV QSC+ P++AV++ S ++ + +Q L
Sbjct: 234 -------------------DGTRKPVTEAQSCHLAVAPNHAVVSRSDRAAHV----EQVL 270
Query: 251 IKTVQLFG 258
+ LFG
Sbjct: 271 LHQQALFG 278
>pdb|1B1X|A Chain A, Structure Of Diferric Mare Lactoferrin At 2.62a Resolution
pdb|1B7Z|A Chain A, Structure Of Oxalate Substituted Diferric Mare Lactoferrin
From Colostrum
pdb|1B7U|A Chain A, Structure Of Mare Apolactoferrin: The N And C Lobes Are In
The Closed Form
pdb|1QJM|A Chain A, Crystal Structure Of A Complex Of Lactoferrin With A
Lanthanide Ion (Sm3+) At 3.4 Anstrom Resolution
pdb|1I6B|A Chain A, Structure Of Equine Apolactoferrin At 3.2 A Resolution
Using Crystals Grown At 303k
pdb|3CR9|A Chain A, Crystal Structure Of The Complex Of Lactoferrin With 6-
(Hydroxymethyl)oxane-2,3,4,5-Tetrol At 3.49 A Resolution
Length = 689
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 103/264 (39%), Gaps = 84/264 (31%)
Query: 3 KNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGP 62
+ S DLT S L GKK+C GVG A W IP+ +L G D +F
Sbjct: 440 RKSDADLTWNS-LSGKKSCHTGVGRTAAWNIPMGLLFNQTGSCKFD---------KFFSQ 489
Query: 63 SCAVNALINKYNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVDK-GEV 118
SCA P D LC LC+G E KC + + Y G+ GAFRCL +K G+V
Sbjct: 490 SCA---------PGADPQSSLCALCVGNNENENKCMPNSEERYYGYTGAFRCLAEKAGDV 540
Query: 119 AFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEV 178
AF+K TV + +G+ K+LK F L L
Sbjct: 541 AFVKDVTVLQNTDGK----NSEPWAKDLKQEDFELLCL---------------------- 574
Query: 179 AFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAK 238
DGTR+PV +SC+ + P++AV++ S +
Sbjct: 575 -------------------------------DGTRKPVAEAESCHLARAPNHAVVSQSDR 603
Query: 239 STQIRRYYQQFLIKTVQLFGGPVP 262
+ +++ L FGG P
Sbjct: 604 AQHLKK----VLFLQQDQFGGNGP 623
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIR----NGGMEVIDCNNHVKSVINYFGPSCAV 66
++ L+G K+C G+G AGW IP+ L G E + K+V N+F SC
Sbjct: 105 QLNQLQGVKSCHTGLGRSAGWNIPIGTLRPYLNWTGPPEPLQ-----KAVANFFSASCVP 159
Query: 67 NALINKYNPIGDNSDRLCELCIGRVPGE-KCTTADPYAGFEGAFRCLVD-KGEVAFLKHT 124
A +Y LC LC G + C++ +PY G+ GAF+CL + G+VAF+K +
Sbjct: 160 CADGKQY-------PNLCRLCAGTEADKCACSSQEPYFGYSGAFKCLENGAGDVAFVKDS 212
Query: 125 TVQEMIEGRIDACKYSFL 142
TV E + + KY L
Sbjct: 213 TVFENLPDEAERDKYELL 230
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 21/119 (17%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL + G+VAF+K +TV E + + ++ +ELLC D TR+PVD ++ C+
Sbjct: 193 SGAFKCLENGAGDVAFVKDSTVFENLPDEAE-----RDKYELLCPDNTRKPVDAFKECHL 247
Query: 225 GQVPSNAVMTTSAKSTQ------IRRYYQQF---LIKTVQLFGGPVPPQRTQGKNVILF 274
+VPS+AV+ S + + R ++F QLFG T G+ +LF
Sbjct: 248 ARVPSHAVVARSVDGREDLIWKLLHRAQEEFGRNKSSAFQLFGS------TPGEQDLLF 300
>pdb|1F9B|A Chain A, Melanin Protein Interaction: X-Ray Structure Of The
Complex Of Mare Lactoferrin With Melanin Monomers
Length = 695
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 103/264 (39%), Gaps = 84/264 (31%)
Query: 3 KNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGP 62
+ S DLT S L GKK+C GVG A W IP+ +L G D +F
Sbjct: 446 RKSDADLTWNS-LSGKKSCHTGVGRTAAWNIPMGLLFNQTGSCKFD---------KFFSQ 495
Query: 63 SCAVNALINKYNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVDK-GEV 118
SCA P D LC LC+G E KC + + Y G+ GAFRCL +K G+V
Sbjct: 496 SCA---------PGADPQSSLCALCVGNNENENKCMPNSEERYYGYTGAFRCLAEKAGDV 546
Query: 119 AFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEV 178
AF+K TV + +G+ K+LK F L L
Sbjct: 547 AFVKDVTVLQNTDGK----NSEPWAKDLKQEDFELLCL---------------------- 580
Query: 179 AFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAK 238
DGTR+PV +SC+ + P++AV++ S +
Sbjct: 581 -------------------------------DGTRKPVAEAESCHLARAPNHAVVSQSDR 609
Query: 239 STQIRRYYQQFLIKTVQLFGGPVP 262
+ +++ L FGG P
Sbjct: 610 AQHLKK----VLFLQQDQFGGNGP 629
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIR----NGGMEVIDCNNHVKSVINYFGPSCAV 66
++ L+G K+C G+G AGW IP+ L G E + K+V N+F SC
Sbjct: 111 QLNQLQGVKSCHTGLGRSAGWNIPIGTLRPYLNWTGPPEPLQ-----KAVANFFSASCVP 165
Query: 67 NALINKYNPIGDNSDRLCELCIGRVPGE-KCTTADPYAGFEGAFRCLVD-KGEVAFLKHT 124
A +Y LC LC G + C++ +PY G+ GAF+CL + G+VAF+K +
Sbjct: 166 CADGKQY-------PNLCRLCAGTEADKCACSSQEPYFGYSGAFKCLENGAGDVAFVKDS 218
Query: 125 TVQEMIEGRIDACKYSFL 142
TV E + + KY L
Sbjct: 219 TVFENLPDEAERDKYELL 236
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 6/72 (8%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL + G+VAF+K +TV E + + ++ +ELLC D TR+PVD ++ C+
Sbjct: 199 SGAFKCLENGAGDVAFVKDSTVFENLPDEAE-----RDKYELLCPDNTRKPVDAFKECHL 253
Query: 225 GQVPSNAVMTTS 236
+VPS+AV+ S
Sbjct: 254 ARVPSHAVVARS 265
>pdb|1CE2|A Chain A, Structure Of Diferric Buffalo Lactoferrin At 2.5a
Resolution
Length = 689
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 94/248 (37%), Gaps = 83/248 (33%)
Query: 15 LRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYN 74
L+GKK+C V AGW IP+ ++ G D +F SCA
Sbjct: 451 LKGKKSCHTAVDRTAGWNIPMGLIANQTGSCAFD---------EFFSQSCA--------- 492
Query: 75 PIGDNSDRLCELCIGRVPG-EKC--TTADPYAGFEGAFRCLV-DKGEVAFLKHTTVQEMI 130
P D RLC LC G G +KC + + Y G+ GAFRCL D G+VAF+K+ TV E
Sbjct: 493 PGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDTVWENT 552
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMI 190
G A K L F L L
Sbjct: 553 NGESTA----DWAKNLNREDFRLLCL---------------------------------- 574
Query: 191 EGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQFL 250
DGTR+PV QSC+ P++AV++ S ++ + +Q L
Sbjct: 575 -------------------DGTRKPVTEAQSCHLAVAPNHAVVSLSERAAHV----EQVL 611
Query: 251 IKTVQLFG 258
+ LFG
Sbjct: 612 LHQQALFG 619
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 16/110 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+K TTV E + + D ++ +ELLC + TR PVD ++ C+
Sbjct: 193 SGAFKCLQDGAGDVAFVKETTVFENLPEKAD-----RDQYELLCLNNTRAPVDAFKECHL 247
Query: 225 GQVPSNAVMTTSAKSTQ------IRRYYQQF---LIKTVQLFGGPVPPQR 265
QVPS+AV+ S + + + ++F + QLFG P P QR
Sbjct: 248 AQVPSHAVVARSVDGKEDLIWKLLSKAQEKFGKNKSGSFQLFGSP-PGQR 296
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDV----LIRNGGMEVIDCNNHVKSVINYFGPSCAV 66
+ L+G+ +C G+G AGW IP+ + L +E + +V +F SC V
Sbjct: 105 QLDQLQGRNSCHTGLGRSAGWNIPMGILRPYLSWTESLEPLQ-----GAVAKFFSASC-V 158
Query: 67 NALINKYNPIGDNSDRLCELCIGRVPGE-KCTTADPYAGFEGAFRCLVD-KGEVAFLKHT 124
+ + P LC+LC G + C+ +PY G+ GAF+CL D G+VAF+K T
Sbjct: 159 PCVDRQAYP------NLCQLCKGEGENQCACSPREPYFGYSGAFKCLQDGAGDVAFVKET 212
Query: 125 TVQEMIEGRIDACKYSFL 142
TV E + + D +Y L
Sbjct: 213 TVFENLPEKADRDQYELL 230
>pdb|1BIY|A Chain A, Structure Of Diferric Buffalo Lactoferrin
Length = 689
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 94/248 (37%), Gaps = 83/248 (33%)
Query: 15 LRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYN 74
L+GKK+C V AGW IP+ ++ G D +F SCA
Sbjct: 451 LKGKKSCHTAVDRTAGWNIPMGLIANQTGSCAFD---------EFFSQSCA--------- 492
Query: 75 PIGDNSDRLCELCIGRVPG-EKC--TTADPYAGFEGAFRCLV-DKGEVAFLKHTTVQEMI 130
P D RLC LC G G +KC + + Y G+ GAFRCL D G+VAF+K+ TV E
Sbjct: 493 PGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDTVWENT 552
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMI 190
G A K L F L L
Sbjct: 553 NGESTA----DWAKNLNREDFRLLCL---------------------------------- 574
Query: 191 EGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQFL 250
DGTR+PV QSC+ P++AV++ S ++ + +Q L
Sbjct: 575 -------------------DGTRKPVTEAQSCHLAVAPNHAVVSLSERAAHV----EQVL 611
Query: 251 IKTVQLFG 258
+ LFG
Sbjct: 612 LHQQALFG 619
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 16/110 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+K TTV E + + D ++ +ELLC + TR PVD ++ C+
Sbjct: 193 SGAFKCLQDGAGDVAFVKETTVFENLPEKAD-----RDQYELLCLNNTRAPVDAFKECHL 247
Query: 225 GQVPSNAVMTTSAKSTQ------IRRYYQQF---LIKTVQLFGGPVPPQR 265
QVPS+AV+ S + + + ++F + QLFG P P QR
Sbjct: 248 AQVPSHAVVARSVDGKEDLIWKLLSKAQEKFGKNKSGSFQLFGSP-PGQR 296
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDV----LIRNGGMEVIDCNNHVKSVINYFGPSCAV 66
+ L+G+ +C G+G AGW IP+ + L +E + +V +F SC V
Sbjct: 105 QLDQLQGRNSCHTGLGRSAGWNIPMGILRPYLSWTESLEPLQ-----GAVAKFFSASC-V 158
Query: 67 NALINKYNPIGDNSDRLCELCIGRVPGE-KCTTADPYAGFEGAFRCLVD-KGEVAFLKHT 124
+ + P LC+LC G + C+ +PY G+ GAF+CL D G+VAF+K T
Sbjct: 159 PCVDRQAYP------NLCQLCKGEGENQCACSPREPYFGYSGAFKCLQDGAGDVAFVKET 212
Query: 125 TVQEMIEGRIDACKYSFL 142
TV E + + D +Y L
Sbjct: 213 TVFENLPEKADRDQYELL 230
>pdb|1BLF|A Chain A, Structure Of Diferric Bovine Lactoferrin At 2.8 Angstroms
Resolution
Length = 689
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 95/250 (38%), Gaps = 83/250 (33%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
+ L+ KK+C V AGW IP+ +++ G D +F SCA
Sbjct: 449 NSLKDKKSCHTAVDRTAGWNIPMGLIVNQTGSCAFD---------EFFSQSCA------- 492
Query: 73 YNPIGDNSDRLCELCIGRVPG-EKC--TTADPYAGFEGAFRCLV-DKGEVAFLKHTTVQE 128
P D RLC LC G G +KC + + Y G+ GAFRCL D G+VAF+K+ TV E
Sbjct: 493 --PGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDTVWE 550
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQE 188
G A K L F L L
Sbjct: 551 NTNGESTA----DWAKNLNREDFRLLCL-------------------------------- 574
Query: 189 MIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQ 248
DGTR+PV QSC+ P++AV++ S ++ ++ Q
Sbjct: 575 ---------------------DGTRKPVTEAQSCHLAVAPNHAVVSRSDRAAHVK----Q 609
Query: 249 FLIKTVQLFG 258
L+ LFG
Sbjct: 610 VLLHQQALFG 619
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDV----LIRNGGMEVIDCNNHVKSVINYFGPSCAV 66
+ L+G+K+C G+G AGW+IP+ + L +E + +V +F SC V
Sbjct: 105 QLDQLQGRKSCHTGLGRSAGWIIPMGILRPYLSWTESLEPLQ-----GAVAKFFSASC-V 158
Query: 67 NALINKYNPIGDNSDRLCELCIGRVPGE-KCTTADPYAGFEGAFRCLVD-KGEVAFLKHT 124
+ + P LC+LC G + C++ +PY G+ GAF+CL D G+VAF+K T
Sbjct: 159 PCIDRQAYP------NLCQLCKGEGENQCACSSREPYFGYSGAFKCLQDGAGDVAFVKET 212
Query: 125 TVQEMIEGRIDACKYSFL 142
TV E + + D +Y L
Sbjct: 213 TVFENLPEKADRDQYELL 230
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 16/110 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+K TTV E + + D ++ +ELLC + +R PVD ++ C+
Sbjct: 193 SGAFKCLQDGAGDVAFVKETTVFENLPEKAD-----RDQYELLCLNNSRAPVDAFKECHL 247
Query: 225 GQVPSNAVMTTSAKSTQ------IRRYYQQF---LIKTVQLFGGPVPPQR 265
QVPS+AV+ S + + + ++F ++ QLFG P P QR
Sbjct: 248 AQVPSHAVVARSVDGKEDLIWKLLSKAQEKFGKNKSRSFQLFGSP-PGQR 296
>pdb|1JNF|A Chain A, Rabbit Serum Transferrin At 2.6 A Resolution
Length = 676
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 166 TGAFRCLVDKGEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQSC 222
TGAFRCLV+KG+VAF+K TV + GR A L +E+FELLC DGTR+PV +C
Sbjct: 515 TGAFRCLVEKGDVAFVKSQTVLQNTGGRNSEPWAKDLKEEDFELLCLDGTRKPVSEAHNC 574
Query: 223 NWGQVPSNAVMTTSAKSTQIRR 244
+ + P++AV++ K+ +++
Sbjct: 575 HLAKAPNHAVVSRKDKAACVKQ 596
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ L+GKK+C G+G AGW IP+ +L+ ++ + + K+V ++F SC
Sbjct: 108 QLNELQGKKSCHTGLGRSAGWNIPIGLLL----CDLPEPRKPLEKAVASFFSGSCV---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDK-GEVAFLKHTTV 126
P D +D +LC+LC PG C++ PY G+ GAF+CL D G+VAF+K T+
Sbjct: 160 -----PCADGADFPQLCQLC----PGCGCSSVQPYFGYSGAFKCLKDGLGDVAFVKQETI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + + +Y L
Sbjct: 211 FENLPSKDERDQYELL 226
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 21/118 (17%)
Query: 166 TGAFRCLVDK-GEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+K T+ E + + + ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGLGDVAFVKQETIFENLPSKDE-----RDQYELLCLDNTRKPVDEYEQCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGPVPPQRTQGKNVIL 273
+VPS+AV+ S Q + ++ + QLF P GKN++
Sbjct: 244 ARVPSHAVVARSVDGKEDLIWELLNQAQEHFGKDKSGDFQLFSSP------HGKNLLF 295
>pdb|1SUV|E Chain E, Structure Of Human Transferrin Receptor-transferrin
Complex
pdb|1SUV|F Chain F, Structure Of Human Transferrin Receptor-transferrin
Complex
Length = 345
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 166 TGAFRCLVDKGEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQSC 222
TGAFRCLV+KG+VAF+K TV + GR A L +E+FELLC DGTR+PV +C
Sbjct: 184 TGAFRCLVEKGDVAFVKSQTVLQNTGGRNSEPWAKDLKEEDFELLCLDGTRKPVSEAHNC 243
Query: 223 NWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFGGPV 261
+ + P++AV++ K+ ++ Q+ L V+ FG V
Sbjct: 244 HLAKAPNHAVVSRKDKAACVK---QKLLDLQVE-FGNTV 278
>pdb|1TFD|A Chain A, High-Resolution X-Ray Studies On Rabbit Serum Transferrin:
Preliminary Structure Analysis Of The N-Terminal Half-
Molecule At 2.3 Angstroms Resolution
Length = 304
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 21/136 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHV-KSVINYFGPSCAVNAL 69
++ L+GKK+C G+G AGW IP+ +L ++ + + K+V ++F SC
Sbjct: 108 QLNELQGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVASFFSGSCV---- 159
Query: 70 INKYNPIGDNSD--RLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDK-GEVAFLKHTTV 126
P D +D +LC+LC PG C+++ PY G+ GAF+CL D G+VAF+K T+
Sbjct: 160 -----PCADGADFPQLCQLC----PGCGCSSSQPYFGYSGAFKCLKDGLGDVAFVKQETI 210
Query: 127 QEMIEGRIDACKYSFL 142
E + + + +Y L
Sbjct: 211 FENLPSKDERDQYELL 226
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 21/118 (17%)
Query: 166 TGAFRCLVDK-GEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+K T+ E + + + ++ +ELLC D TR+PVD Y+ C+
Sbjct: 189 SGAFKCLKDGLGDVAFVKQETIFENLPSKDE-----RDQYELLCLDNTRKPVDEYEQCHL 243
Query: 225 GQVPSNAVMTTSAKS---------TQIRRYYQQFLIKTVQLFGGPVPPQRTQGKNVIL 273
+VPS+AV+ S Q + ++ + QLF P GKN++
Sbjct: 244 ARVPSHAVVARSVDGKEDLIWELLNQAQEHFGKDKSGDFQLFSSP------HGKNLLF 295
>pdb|1LFG|A Chain A, Structure Of Diferric Human Lactoferrin
Length = 691
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 71/148 (47%), Gaps = 26/148 (17%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
+ ++GKK+C V AGW IP+ +L G D YF SCA
Sbjct: 451 NSVKGKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFD---------EYFSQSCA------- 494
Query: 73 YNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVDK-GEVAFLKHTTVQE 128
P D + LC LCIG GE KC + + Y G+ GAFRCL + G+VAF+K TV +
Sbjct: 495 --PGSDPASNLCALCIGDEEGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQ 552
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLL 156
+G + K+LK++ F L L
Sbjct: 553 NTDGNNN----EAWAKDLKLADFALLCL 576
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP
Sbjct: 105 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPP------- 142
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
PI E + R C F R GE
Sbjct: 143 ---EPI--------EAAVARFFSASCVPGADKGQFPNLCRLCAGTGEN------------ 179
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 180 -------KCAFSSQEPYFSY---------------SGAFKCLKDGAGDVAFIRESTVFED 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 218 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 272
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSP 292
>pdb|1LFH|A Chain A, Molecular Replacement Solution Of The Structure Of
Apolactoferrin, A Protein Displaying Large-Scale
Conformational Change
Length = 691
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
+ ++GKK+C V AGW IP+ +L G D YF SCA
Sbjct: 451 NSVKGKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFD---------EYFSQSCA------- 494
Query: 73 YNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVDK-GEVAFLKHTTVQE 128
P D LC LCIG GE KC + + Y G+ GAFRCL + G+VAF+K TV +
Sbjct: 495 --PGSDPRSNLCALCIGDEEGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQ 552
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLL 156
+G + K+LK++ F L L
Sbjct: 553 NTDGNNN----EAWAKDLKLADFALLCL 576
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP
Sbjct: 105 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPP------- 142
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
PI E + R C F R GE
Sbjct: 143 ---EPI--------EAAVARFFSASCVPGADKGQFPNLCRLCAGTGEN------------ 179
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 180 -------KCAFSSQEPYFSY---------------SGAFKCLKDGAGDVAFIRESTVFED 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 218 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 272
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSP 292
>pdb|1LFI|A Chain A, Metal Substitution In Transferrins: The Crystal Structure
Of Human Copper-lactoferrin At 2.1 Angstroms Resolution
Length = 691
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
+ ++GKK+C V AGW IP+ +L G D YF SCA
Sbjct: 451 NSVKGKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFD---------EYFSQSCA------- 494
Query: 73 YNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVDK-GEVAFLKHTTVQE 128
P D LC LCIG GE KC + + Y G+ GAFRCL + G+VAF+K TV +
Sbjct: 495 --PGSDPRSNLCALCIGDEEGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQ 552
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLL 156
+G + K+LK++ F L L
Sbjct: 553 NTDGNNN----EAWAKDLKLADFALLCL 576
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP
Sbjct: 105 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPP------- 142
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
PI E + R C F R GE
Sbjct: 143 ---EPI--------EAAVARFFSASCVPGADKGQFPNLCRLCAGTGEN------------ 179
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 180 -------KCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 218 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 272
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSP 292
>pdb|1JW1|A Chain A, Crystallization And Structure Determination Of Goat
Lactoferrin At 4.0 Resolution: A New Form Of Packing In
Lactoferrins With A High Solvent Content In Crystals
Length = 689
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 92/250 (36%), Gaps = 83/250 (33%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
+ L+GKK+C V AGW IP+ ++ G D +F SCA
Sbjct: 449 NSLKGKKSCHTAVDRTAGWNIPMGLIANQTGSCAFD---------EFFSQSCA------- 492
Query: 73 YNPIGDNSDRLCELCIGRVPG-EKC--TTADPYAGFEGAFRCLV-DKGEVAFLKHTTVQE 128
P D LC LC G G +KC + + Y G+ GAFRCL D G+VAF+K+ TV E
Sbjct: 493 --PGADPKSSLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDTVWE 550
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQE 188
G A K L F L L
Sbjct: 551 NTNGESSA----DWAKNLNREDFRLLCL-------------------------------- 574
Query: 189 MIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQ 248
DGT +PV QSC P++AV++ S ++ + +Q
Sbjct: 575 ---------------------DGTTKPVTEAQSCYLAVAPNHAVVSRSDRAAHV----EQ 609
Query: 249 FLIKTVQLFG 258
L+ LFG
Sbjct: 610 VLLHQQALFG 619
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 12 ISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALIN 71
+ L+G+K+C G+G AGW IPV +L R +V +F SC V +
Sbjct: 106 LDQLQGQKSCHMGLGRSAGWNIPVGIL-RPPLSWTESAEPLQGAVARFFSASC-VPCVDG 163
Query: 72 KYNPIGDNSDRLCELCIGRVPGEK---CTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQ 127
K P LC+LC G GE C++ +PY G+ GAF+CL D G+VAF+K TTV
Sbjct: 164 KAYP------NLCQLCKG--VGENKCACSSQEPYFGYSGAFKCLQDGAGDVAFVKETTVF 215
Query: 128 EMIEGRIDACKYSFL 142
E + + D +Y L
Sbjct: 216 ENLPEKADRDQYELL 230
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 21/119 (17%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+K TTV E + + D ++ +ELLC + TR PVD ++ C+
Sbjct: 193 SGAFKCLQDGAGDVAFVKETTVFENLPEKAD-----RDQYELLCLNNTRAPVDAFKECHL 247
Query: 225 GQVPSNAVMTTSAKSTQ------IRRYYQQF---LIKTVQLFGGPVPPQRTQGKNVILF 274
QVPS+AV+ S + +R+ ++F + QLFG P +G+ +LF
Sbjct: 248 AQVPSHAVVARSVDGKENLIWELLRKAQEKFGKNKSQRFQLFGSP------EGRRDLLF 300
>pdb|1B0L|A Chain A, Recombinant Human Diferric Lactoferrin
Length = 691
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
+ ++GKK+C V AGW IP+ +L G D YF SCA
Sbjct: 451 NSVKGKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFD---------EYFSQSCA------- 494
Query: 73 YNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVDK-GEVAFLKHTTVQE 128
P D LC LCIG GE KC + + Y G+ GAFRCL + G+VAF+K TV +
Sbjct: 495 --PGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQ 552
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLL 156
+G + K+LK++ F L L
Sbjct: 553 NTDGNNN----EAWAKDLKLADFALLCL 576
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP
Sbjct: 105 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPP------- 142
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
PI E + R C F R GE
Sbjct: 143 ---EPI--------EAAVARFFSASCVPGADKGQFPNLCRLCAGTGEN------------ 179
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 180 -------KCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 218 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 272
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSP 292
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 166 TGAFRCLVDK-GEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQS 221
TGAFRCL + G+VAF+K TV + +G + A L +F LLC DG R+PV +S
Sbjct: 529 TGAFRCLAENAGDVAFVKDVTVLQNTDGNNNEAWAKDLKLADFALLCLDGKRKPVTEARS 588
Query: 222 CNWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFG 258
C+ P++AV++ K +++ Q L+ FG
Sbjct: 589 CHLAMAPNHAVVSRMDKVERLK----QVLLHQQAKFG 621
>pdb|1N76|A Chain A, Crystal Structure Of Human Seminal Lactoferrin At 3.4 A
Resolution
Length = 690
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
+ ++GKK+C V AGW IP+ +L G D YF SCA
Sbjct: 450 NSVKGKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFD---------EYFSQSCA------- 493
Query: 73 YNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVDK-GEVAFLKHTTVQE 128
P D LC LCIG GE KC + + Y G+ GAFRCL + G+VAF+K TV +
Sbjct: 494 --PGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQ 551
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLL 156
+G + K+LK++ F L L
Sbjct: 552 NTDGNNN----DAWAKDLKLADFALLCL 575
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP
Sbjct: 104 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPP------- 141
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
PI E + R C F R GE
Sbjct: 142 ---EPI--------EAAVARFFSASCVPGADKGQFPNLCRLCAGTGEN------------ 178
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 179 -------KCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 216
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 217 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 271
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 272 QAQEKFGKDKSPKFQLFGSP 291
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 166 TGAFRCLVDK-GEVAFLKHTTVQEMIEGRI-DAYG--LTKENFELLCTDGTRQPVDNYQS 221
TGAFRCL + G+VAF+K TV + +G DA+ L +F LLC DG R+PV +S
Sbjct: 528 TGAFRCLAENAGDVAFVKDVTVLQNTDGNNNDAWAKDLKLADFALLCLDGKRKPVTEARS 587
Query: 222 CNWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFG 258
C+ P++AV++ K +++ Q L+ FG
Sbjct: 588 CHLAMAPNHAVVSRMDKVERLK----QVLLHQQAKFG 620
>pdb|2BJJ|X Chain X, Structure Of Recombinant Human Lactoferrin Produced In The
Milk Of Transgenic Cows
Length = 692
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
+ ++GKK+C V AGW IP+ +L G D YF SCA
Sbjct: 452 NSVKGKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFD---------EYFSQSCA------- 495
Query: 73 YNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVDK-GEVAFLKHTTVQE 128
P D LC LCIG GE KC + + Y G+ GAFRCL + G+VAF+K TV +
Sbjct: 496 --PGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQ 553
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLL 156
+G + K+LK++ F L L
Sbjct: 554 NTDGNNN----DAWAKDLKLADFALLCL 577
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP
Sbjct: 106 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPP------- 143
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
PI E + R C F R GE
Sbjct: 144 ---EPI--------EAAVARFFSASCVPGADKGQFPNLCRLCAGTGEN------------ 180
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 181 -------KCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 218
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 219 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 273
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 274 QAQEKFGKDKSPKFQLFGSP 293
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 166 TGAFRCLVDK-GEVAFLKHTTVQEMIEGRI-DAYG--LTKENFELLCTDGTRQPVDNYQS 221
TGAFRCL + G+VAF+K TV + +G DA+ L +F LLC DG R+PV +S
Sbjct: 530 TGAFRCLAENAGDVAFVKDVTVLQNTDGNNNDAWAKDLKLADFALLCLDGKRKPVTEARS 589
Query: 222 CNWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFG 258
C+ P++AV++ K +++ Q L+ FG
Sbjct: 590 CHLAMAPNHAVVSRMDKVERLK----QVLLHQQAKFG 622
>pdb|1DTZ|A Chain A, Structure Of Camel Apo-Lactoferrin Demonstrates Its Dual
Role In Sequestering And Transporting Ferric Ions
Simultaneously:crystal Structure Of Camel
Apo-Lactoferrin At 2.6a Resolution.
pdb|1I6Q|A Chain A, Formation Of A Protein Intermediate And Its Trapping By
The Simultaneous Crystallization Process: Crystal
Structure Of An Iron-Saturated Intermediate In The Fe3+
Binding Pathway Of Camel Lactoferrin At 2.7 Resolution
Length = 689
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 22/140 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIR----NGGMEVIDCNNHVKSVINYFGPSCAV 66
++ L+G K+C G+G AGW IP+ +L G E + K+V +F SC V
Sbjct: 105 QLNQLQGLKSCHTGLGRSAGWNIPMGLLRPFLDWTGPPEPLQ-----KAVAKFFSASC-V 158
Query: 67 NALINKYNPIGDNSDRLCELCIGRVPGEK---CTTADPYAGFEGAFRCLVD-KGEVAFLK 122
+ K P LC+LC G GE C++ +PY G+ GAF+CL D G+VAF+K
Sbjct: 159 PCVDGKEYP------NLCQLCAGT--GENKCACSSQEPYFGYSGAFKCLQDGAGDVAFVK 210
Query: 123 HTTVQEMIEGRIDACKYSFL 142
+TV E + + D +Y L
Sbjct: 211 DSTVFESLPAKADRDQYELL 230
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 8/98 (8%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+K +TV E + + D ++ +ELLC + TR+PVD +Q C+
Sbjct: 193 SGAFKCLQDGAGDVAFVKDSTVFESLPAKAD-----RDQYELLCPNNTRKPVDAFQECHL 247
Query: 225 GQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFGGPVP 262
+VPS+AV+ S + + + L+K + FG P
Sbjct: 248 ARVPSHAVVARSVNGKEDLIW--KLLVKAQEKFGRGKP 283
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 97/255 (38%), Gaps = 83/255 (32%)
Query: 8 DLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVN 67
D + LRGKK+C V AGW IP+ L ++ D +F SCA
Sbjct: 444 DKITWNSLRGKKSCHTAVDRTAGWNIPMGPLFKDTDSCRFD---------EFFSQSCA-- 492
Query: 68 ALINKYNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVDK-GEVAFLKH 123
P D +LC LC G G+ KC +++ G+ GAFRCL + G+VAF+K
Sbjct: 493 -------PGSDPRSKLCALCAGNEEGQLKCVPNSSERLYGYTGAFRCLAENVGDVAFVKD 545
Query: 124 TTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKH 183
TV + +G+ K+LK+ F L L
Sbjct: 546 VTVLDNTDGK----GTEQWAKDLKLGDFELLCL--------------------------- 574
Query: 184 TTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIR 243
+GTR+PV +SC+ P++AV++ K +R
Sbjct: 575 --------------------------NGTRKPVTEAESCHLPVAPNHAVVSRIDKVAHLR 608
Query: 244 RYYQQFLIKTVQLFG 258
Q L++ FG
Sbjct: 609 ----QVLLRQQAHFG 619
>pdb|1CB6|A Chain A, Structure Of Human Apolactoferrin At 2.0 A Resolution.
pdb|1BKA|A Chain A, Oxalate-Substituted Diferric Lactoferrin
Length = 691
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
+ ++GKK+C V AGW IP+ +L G D YF SCA
Sbjct: 451 NSVKGKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFD---------EYFSQSCA------- 494
Query: 73 YNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVDK-GEVAFLKHTTVQE 128
P D LC LCIG GE KC + + Y G+ GAFRCL + G+VAF+K TV +
Sbjct: 495 --PGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQ 552
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLL 156
+G + K+LK++ F L L
Sbjct: 553 NTDGNNN----EAWAKDLKLADFALLCL 576
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP
Sbjct: 105 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPP------- 142
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
PI E + R C F R GE
Sbjct: 143 ---EPI--------EAAVARFFSASCVPGADKGQFPNLCRLCAGTGEN------------ 179
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 180 -------KCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 218 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 272
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSP 292
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 166 TGAFRCLVDK-GEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQS 221
TGAFRCL + G+VAF+K TV + +G + A L +F LLC DG R+PV +S
Sbjct: 529 TGAFRCLAENAGDVAFVKDVTVLQNTDGNNNEAWAKDLKLADFALLCLDGKRKPVTEARS 588
Query: 222 CNWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFG 258
C+ P++AV++ K +++ Q L+ FG
Sbjct: 589 CHLAMAPNHAVVSRMDKVERLK----QVLLHQQAKFG 621
>pdb|1FCK|A Chain A, Structure Of Diceric Human Lactoferrin
Length = 692
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
+ ++GKK+C V AGW IP+ +L G D YF SCA
Sbjct: 452 NSVKGKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFD---------EYFSQSCA------- 495
Query: 73 YNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVDK-GEVAFLKHTTVQE 128
P D LC LCIG GE KC + + Y G+ GAFRCL + G+VAF+K TV +
Sbjct: 496 --PGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQ 553
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLL 156
+G + K+LK++ F L L
Sbjct: 554 NTDGNNN----EAWAKDLKLADFALLCL 577
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP
Sbjct: 106 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPP------- 143
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
PI E + R C F R GE
Sbjct: 144 ---EPI--------EAAVARFFSASCVPGADKGQFPNLCRLCAGTGEN------------ 180
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 181 -------KCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 218
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 219 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 273
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 274 QAQEKFGKDKSPKFQLFGSP 293
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 166 TGAFRCLVDK-GEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQS 221
TGAFRCL + G+VAF+K TV + +G + A L +F LLC DG R+PV +S
Sbjct: 530 TGAFRCLAENAGDVAFVKDVTVLQNTDGNNNEAWAKDLKLADFALLCLDGKRKPVTEARS 589
Query: 222 CNWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFG 258
C+ P++AV++ K +++ Q L+ FG
Sbjct: 590 CHLAMAPNHAVVSRMDKVERLK----QVLLHQQAKFG 622
>pdb|1LCF|A Chain A, Crystal Structure Of Copper-And Oxalate-Substituted Human
Lactoferrin At 2.0 Angstroms Resolution
Length = 691
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
+ ++GKK+C V AGW IP+ +L G D YF SCA
Sbjct: 451 NSVKGKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFD---------EYFSQSCA------- 494
Query: 73 YNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVDK-GEVAFLKHTTVQE 128
P D LC LCIG GE KC + + Y G+ GAFRCL + G+VAF+K TV +
Sbjct: 495 --PGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQ 552
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLL 156
+G + K+LK++ F L L
Sbjct: 553 NTDGNNN----EAWAKDLKLADFALLCL 576
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP
Sbjct: 105 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPP------- 142
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
PI E + R C F R GE
Sbjct: 143 ---EPI--------EAAVARFFSASCVPGADKGQFPNLCRLCAGTGEN------------ 179
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 180 -------KCAFSSQEPYFSY---------------SGAFKCLKDGAGDVAFIRESTVFED 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 218 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 272
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSP 292
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 166 TGAFRCLVDK-GEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQS 221
TGAFRCL + G+VAF+K TV + +G + A L +F LLC DG R+PV +S
Sbjct: 529 TGAFRCLAENAGDVAFVKDVTVLQNTDGNNNEAWAKDLKLADFALLCLDGKRKPVTEARS 588
Query: 222 CNWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFG 258
C+ P++AV++ K +++ Q L+ FG
Sbjct: 589 CHLAMAPNHAVVSRMDKVERLK----QVLLHQQAKFG 621
>pdb|1SQY|A Chain A, Structure Of Human Diferric Lactoferrin At 2.5a Resolution
Using Crystals Grown At Ph 6.5
Length = 691
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 13 SHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINK 72
+ ++GKK+C V AGW IP+ +L G D YF SCA
Sbjct: 451 NSVKGKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFD---------EYFSQSCA------- 494
Query: 73 YNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVDK-GEVAFLKHTTVQE 128
P D LC LCIG GE KC + + Y G+ GAFRCL + G+VAF+K TV +
Sbjct: 495 --PGRDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQ 552
Query: 129 MIEGRIDACKYSFLGKELKMSFFYFLLL 156
+G + K+LK++ F L L
Sbjct: 553 NTDGNNN----EAWAKDLKLADFALLCL 576
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP
Sbjct: 105 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPP------- 142
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
PI E + R C F R GE
Sbjct: 143 ---EPI--------EAAVARFFSASCVPGADKGQFPNLCRLCAGTGEN------------ 179
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 180 -------KCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 218 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 272
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 273 QAQEKFGKDKSPAFQLFGSP 292
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 166 TGAFRCLVDK-GEVAFLKHTTVQEMIEGRID---AYGLTKENFELLCTDGTRQPVDNYQS 221
TGAFRCL + G+VAF+K TV + +G + A L +F LLC DG R+PV +S
Sbjct: 529 TGAFRCLAENAGDVAFVKDVTVLQNTDGNNNEAWAKDLKLADFALLCLDGKRKPVTEARS 588
Query: 222 CNWGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFG 258
C+ P++AV++ K +++ Q L+ FG
Sbjct: 589 CHLAMAPNHAVVSRMDKVERLK----QVLLHQQAKFG 621
>pdb|1VFE|A Chain A, Human Lactoferrin, N-terminal Lobe Mutant With Arg 121
Replaced By Ser (r121s)
Length = 333
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ + AGW +P+ L + +N+ GP + A +
Sbjct: 105 QLNELQGLKSCHTGLRSTAGWNVPIGTL---------------RPFLNWTGPPEPIEAAV 149
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
++ VPG DKG+ L
Sbjct: 150 ARF------------FSASCVPG-------------------ADKGQFPNLCRLCAG--- 175
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 176 ---TGENKCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 218 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 272
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSP 292
>pdb|2PMS|A Chain A, Crystal Structure Of The Complex Of Human Lactoferrin
N-Lobe And Lactoferrin-Binding Domain Of Pneumococcal
Surface Protein A
pdb|2PMS|B Chain B, Crystal Structure Of The Complex Of Human Lactoferrin
N-Lobe And Lactoferrin-Binding Domain Of Pneumococcal
Surface Protein A
Length = 344
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 104/260 (40%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP + A +
Sbjct: 106 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPPEPIEAAV 150
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
++ C VPG DKG+ L
Sbjct: 151 ARF---------FSASC---VPG-------------------ADKGQFPNLCRLCAG--- 176
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 177 ---TGENKCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 218
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 219 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 273
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 274 QAQEKFGKDKSPKFQLFGSP 293
>pdb|1VFD|A Chain A, Human Lactoferrin, N-Terminal Lobe Mutant With Arg 121
Replaced By Glu (R121e)
Length = 330
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 103/260 (39%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP + A +
Sbjct: 105 QLNELQGLKSCHTGLRETAGWNVPIGTL---------------RPFLNWTGPPEPIEAAV 149
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
++ VPG DKG+ L
Sbjct: 150 ARF------------FSASCVPG-------------------ADKGQFPNLCRLCAG--- 175
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 176 ---TGENKCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 218 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 272
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSP 292
>pdb|1LCT|A Chain A, Structure Of The Recombinant N-Terminal Lobe Of Human
Lactoferrin At 2.0 Angstroms Resolution
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 103/260 (39%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP + A +
Sbjct: 105 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPPEPIEAAV 149
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
++ VPG DKG+ L
Sbjct: 150 ARF------------FSASCVPG-------------------ADKGQFPNLCRLCAG--- 175
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 176 ---TGENKCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 218 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 272
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSP 292
>pdb|1DSN|A Chain A, D60s N-Terminal Lobe Human Lactoferrin
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP
Sbjct: 105 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPP------- 142
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
PI E + R C F R GE
Sbjct: 143 ---EPI--------EAAVARFFSASCVPGADKGQFPNLCRLCAGTGEN------------ 179
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 180 -------KCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 218 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 272
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSP 292
>pdb|1L5T|A Chain A, Crystal Structure Of A Domain-Opened Mutant (R121d) Of The
Human Lactoferrin N-Lobe Refined From A Merohedrally-
Twinned Crystal Form.
pdb|1L5T|B Chain B, Crystal Structure Of A Domain-Opened Mutant (R121d) Of The
Human Lactoferrin N-Lobe Refined From A Merohedrally-
Twinned Crystal Form
Length = 332
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP
Sbjct: 105 QLNELQGLKSCHTGLRDTAGWNVPIGTL---------------RPFLNWTGPP------- 142
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
PI E + R C F R GE
Sbjct: 143 ---EPI--------EAAVARFFSASCVPGADKGQFPNLCRLCAGTGEN------------ 179
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 180 -------KCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 218 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 272
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSP 292
>pdb|1H43|A Chain A, R210e N-Terminal Lobe Human Lactoferrin
Length = 334
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 103/260 (39%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP + A +
Sbjct: 106 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPPEPIEAAV 150
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
++ VPG DKG+ L
Sbjct: 151 ARF------------FSASCVPG-------------------ADKGQFPNLCRLCAG--- 176
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 177 ---TGENKCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIEESTVFED 218
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 219 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 273
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 274 QAQEKFGKDKSPKFQLFGSP 293
>pdb|1EH3|A Chain A, R210k N-Terminal Lobe Human Lactoferrin
Length = 334
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 15/105 (14%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+K +TV E + + ++ +ELLC D TR+PVD ++ C+
Sbjct: 194 SGAFKCLRDGAGDVAFIKESTVFEDLSDEAE-----RDEYELLCPDNTRKPVDKFKDCHL 248
Query: 225 GQVPSNAVMTTSAKSTQ------IRRYYQQF---LIKTVQLFGGP 260
+VPS+AV+ S + +R+ ++F QLFG P
Sbjct: 249 ARVPSHAVVARSVNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSP 293
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 22/140 (15%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIR----NGGMEVIDCNNHVKSVINYFGPSCAV 66
++ L+G K+C G+ AGW +P+ L G E I+ +V +F SC
Sbjct: 106 QLNELQGLKSCHTGLRRTAGWNVPIGTLRPFLDWTGPPEPIEA-----AVARFFSASCVP 160
Query: 67 NALINKYNPIGDNSDRLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVD-KGEVAFLK 122
A ++ LC LC G GE KC ++ +PY + GAF+CL D G+VAF+K
Sbjct: 161 GADKGQF-------PNLCRLCAGT--GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIK 211
Query: 123 HTTVQEMIEGRIDACKYSFL 142
+TV E + + +Y L
Sbjct: 212 ESTVFEDLSDEAERDEYELL 231
>pdb|1HSE|A Chain A, H253m N Terminal Lobe Of Human Lactoferrin
Length = 334
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 103/260 (39%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP + A +
Sbjct: 105 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPPEPIEAAV 149
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
++ C VPG DKG+ L
Sbjct: 150 ARF---------FSASC---VPG-------------------ADKGQFPNLCRLCAG--- 175
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF++ +TV E
Sbjct: 176 ---TGENKCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIRESTVFED 217
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS AV+ S + +R
Sbjct: 218 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSMAVVARSVNGKEDAIWNLLR 272
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 273 QAQEKFGKDKSPKFQLFGSP 292
>pdb|1H44|A Chain A, R210l N-Terminal Lobe Human Lactoferrin
Length = 334
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 99/260 (38%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP
Sbjct: 106 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPP------- 143
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
PI E + R C F R GE
Sbjct: 144 ---EPI--------EAAVARFFSASCVPGADKGQFPNLCRLCAGTGEN------------ 180
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF+ +TV E
Sbjct: 181 -------KCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFILESTVFED 218
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 219 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 273
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 274 QAQEKFGKDKSPKFQLFGSP 293
>pdb|1H45|A Chain A, R210g N-Terminal Lobe Human Lactoferrin
Length = 334
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 103/260 (39%), Gaps = 82/260 (31%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +++ GP + A +
Sbjct: 106 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLDWTGPPEPIEAAV 150
Query: 71 NKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMI 130
++ C VPG DKG+ L
Sbjct: 151 ARF---------FSASC---VPG-------------------ADKGQFPNLCRLCAG--- 176
Query: 131 EGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQEM 189
K +F +E S+ +GAF+CL D G+VAF+ +TV E
Sbjct: 177 ---TGENKCAFSSQEPYFSY---------------SGAFKCLRDGAGDVAFIGESTVFED 218
Query: 190 IEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQ------IR 243
+ + ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S + +R
Sbjct: 219 LSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLR 273
Query: 244 RYYQQF---LIKTVQLFGGP 260
+ ++F QLFG P
Sbjct: 274 QAQEKFGKDKSPKFQLFGSP 293
>pdb|1LGB|C Chain C, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 159
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 28/143 (19%)
Query: 11 HISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALI 70
++ L+G K+C G+ AGW +P+ L + +N+ GP + A +
Sbjct: 15 QLNELQGLKSCHTGLRRTAGWNVPIGTL---------------RPFLNWTGPPEPIEAAV 59
Query: 71 NKY-----NPIGDNSD--RLCELCIGRVPGE-KC--TTADPYAGFEGAFRCLVD-KGEVA 119
++ P D LC LC G GE KC ++ +PY + GAF+CL D G+VA
Sbjct: 60 ARFFSASCVPGADKGQFPNLCRLCAGT--GENKCAFSSQEPYFSYSGAFKCLKDGAGDVA 117
Query: 120 FLKHTTVQEMIEGRIDACKYSFL 142
F++ +TV E + + +Y L
Sbjct: 118 FIRESTVFEDLSDEAERDEYELL 140
>pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From
Clostridium Difficile
pdb|4E1L|B Chain B, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From
Clostridium Difficile
pdb|4E1L|C Chain C, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From
Clostridium Difficile
pdb|4E1L|D Chain D, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From
Clostridium Difficile
Length = 395
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 32 VIPVDVLIRNGGMEVIDCNNHVKSVINYFGPS 63
++PVDVLIR G +E ID + + K + + G S
Sbjct: 202 IVPVDVLIRRGKIETIDKDEYPKLGMTFEGLS 233
>pdb|1Q40|A Chain A, Crystal Structure Of The C. Albicans Mtr2-Mex67 M Domain
Complex
pdb|1Q40|C Chain C, Crystal Structure Of The C. Albicans Mtr2-Mex67 M Domain
Complex
Length = 201
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 127 QEMIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAF 169
Q +I + CK F K L+ L Y G LI GTG F
Sbjct: 77 QPIIPSPQEDCKLQFQKKWLQTPLSSHQLTSYDGHLIPGTGTF 119
>pdb|1Q42|A Chain A, Crystal Structure Analysis Of The Candida Albicans Mtr2
Length = 201
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 127 QEMIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAF 169
Q +I + CK F K L+ L Y G LI GTG F
Sbjct: 77 QPIIPSPQEDCKLQFQKKWLQTPLSSHQLTSYDGHLIPGTGTF 119
>pdb|2ZYL|A Chain A, Crystal Structure Of 3-Ketosteroid-9-Alpha-Hydroxylase
(Ksha) From M. Tuberculosis
Length = 386
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 52 HVKSVINYFGPSCAVNALINKY 73
H+ S +YFGPS +N L N+Y
Sbjct: 225 HLDSEASYFGPSFMINWLHNRY 246
>pdb|3GDB|A Chain A, Crystal Structure Of Spr0440 Glycoside Hydrolase Domain,
Endo-D From Streptococcus Pneumoniae R6
Length = 937
Score = 28.1 bits (61), Expect = 5.9, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 192 GRIDAYGLTKENFELLCTDGTRQPVDN-YQSCNWGQVPSNAVMTTS 236
GR GL + N++ + +G + P DN + + NW + ++ + T+
Sbjct: 365 GRYHQDGLGEYNYQFMQPEGDKVPADNFFANFNWDKAKNDYTIATA 410
>pdb|2W91|A Chain A, Structure Of A Streptococcus Pneumoniae Family 85
Glycoside Hydrolase, Endo-D.
pdb|2W92|A Chain A, Structure Of A Streptococcus Pneumoniae Family 85
Glycoside Hydrolase, Endo-D, In Complex With
Nag-Thiazoline
Length = 653
Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 192 GRIDAYGLTKENFELLCTDGTRQPVDN-YQSCNWGQVPSNAVMTTS 236
GR GL + N++ + +G + P DN + + NW + ++ + T+
Sbjct: 214 GRYHQDGLGEYNYQFMQPEGDKVPADNFFANFNWDKAKNDYTIATA 259
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,602,090
Number of Sequences: 62578
Number of extensions: 359725
Number of successful extensions: 1259
Number of sequences better than 100.0: 84
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 727
Number of HSP's gapped (non-prelim): 220
length of query: 276
length of database: 14,973,337
effective HSP length: 97
effective length of query: 179
effective length of database: 8,903,271
effective search space: 1593685509
effective search space used: 1593685509
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)