Query psy3351
Match_columns 276
No_of_seqs 114 out of 533
Neff 3.7
Searched_HMMs 29240
Date Fri Aug 16 22:47:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3351.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3351hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3skp_A Serotransferrin; iron b 100.0 1E-59 3.6E-64 442.5 10.3 190 1-272 95-293 (342)
2 3tod_A Lactotransferrin; C-LOB 100.0 2.5E-59 8.5E-64 439.0 11.3 191 1-272 98-299 (335)
3 3mc2_A Inhibitor of carbonic a 100.0 2.7E-57 9.4E-62 456.9 12.5 191 1-272 439-638 (687)
4 3v83_A Serotransferrin; iron b 100.0 2.1E-56 7.3E-61 451.0 10.9 190 1-272 451-649 (698)
5 1iej_A Ovotransferrin; iron, m 100.0 6E-55 2.1E-59 407.1 12.5 179 1-262 98-279 (332)
6 1h45_A Lactoferrin; metal tran 100.0 1.3E-54 4.4E-59 404.9 8.5 192 1-272 99-300 (334)
7 1cb6_A Protein (lactoferrin); 100.0 4.5E-54 1.5E-58 433.6 11.2 192 1-272 98-299 (691)
8 2d3i_A Ovotransferrin; aluminu 100.0 1.1E-53 3.6E-58 430.6 11.6 179 1-262 98-279 (686)
9 3v83_A Serotransferrin; iron b 100.0 9.8E-54 3.4E-58 431.6 10.8 187 1-272 120-313 (698)
10 3mc2_A Inhibitor of carbonic a 100.0 1.3E-53 4.4E-58 430.2 10.0 186 1-272 107-300 (687)
11 2d3i_A Ovotransferrin; aluminu 100.0 2.6E-53 8.7E-58 427.8 11.1 190 1-272 437-636 (686)
12 1blf_A Lactoferrin; transferri 100.0 2.4E-52 8.4E-57 420.6 12.8 192 1-272 98-299 (689)
13 1ryo_A Serotransferrin; iron t 100.0 2.7E-51 9.1E-56 381.6 10.8 188 1-272 101-294 (327)
14 1blf_A Lactoferrin; transferri 100.0 3.8E-51 1.3E-55 412.0 11.8 191 1-272 439-640 (689)
15 1cb6_A Protein (lactoferrin); 100.0 4.2E-51 1.4E-55 412.0 9.8 191 1-272 441-642 (691)
16 3skp_A Serotransferrin; iron b 98.0 4.6E-07 1.6E-11 85.4 -1.1 30 166-195 181-210 (342)
17 3tod_A Lactotransferrin; C-LOB 98.0 7.1E-07 2.4E-11 83.9 -1.0 30 166-195 186-216 (335)
18 1iej_A Ovotransferrin; iron, m 96.6 0.00026 8.8E-09 66.1 -1.0 22 166-187 192-214 (332)
19 1h45_A Lactoferrin; metal tran 96.5 0.0003 1E-08 65.6 -0.9 23 166-188 194-217 (334)
20 1ryo_A Serotransferrin; iron t 93.3 0.01 3.5E-07 55.2 -1.1 22 166-187 189-211 (327)
21 3ix1_A N-formyl-4-amino-5-amin 37.2 9.2 0.00032 32.3 0.7 34 8-43 97-130 (302)
22 3uif_A Sulfonate ABC transport 33.6 13 0.00045 32.4 1.1 34 8-43 110-143 (348)
23 3ksx_A Nitrate transport prote 31.2 12 0.00043 32.1 0.6 34 8-43 122-155 (324)
24 3qsl_A Putative exported prote 29.4 14 0.00049 31.2 0.6 33 7-41 128-160 (346)
25 1jxc_A Putative trypsin inhibi 23.9 11 0.00039 28.1 -0.9 11 110-120 10-21 (68)
26 2de3_A Dibenzothiophene desulf 23.2 21 0.00072 32.2 0.6 17 8-24 110-126 (365)
27 3n5l_A Binding protein compone 21.7 14 0.00049 32.4 -0.8 37 2-40 99-139 (310)
28 3p7i_A PHND, subunit of alkylp 21.3 15 0.0005 32.9 -0.9 37 2-40 109-149 (321)
No 1
>3skp_A Serotransferrin; iron binding protein, transferrin receptor, TBP metal binding protein; 1.70A {Homo sapiens} PDB: 3v89_B 1suv_E
Probab=100.00 E-value=1e-59 Score=442.52 Aligned_cols=190 Identities=37% Similarity=0.727 Sum_probs=163.2
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCCCchhhhhhhhccCCccCCcccccCCCCCCCc
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYNPIGDNS 80 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c~~~~kavs~FFs~SC~PGa~~~~y~~~~~~~ 80 (276)
|||++ .+.+|+||||||+||||++++|||+||++.|+++.. .| ++++||++||+||+. .+
T Consensus 95 VkK~s--~~~tl~dLrGKksCHtg~g~tAGW~iP~g~L~~~~~----~c-----~~s~FFs~sC~PG~~---------~~ 154 (342)
T 3skp_A 95 VKKSA--SDLTWDNLKGKKSCHTAVGRTAGWNIPMGLLYNKIN----HC-----RFDEFFSEGCAPGSK---------KD 154 (342)
T ss_dssp EETTC--SSCCGGGCTTSEEEESCTTCTTTTHHHHHHSGGGCS----TT-----CGGGSSSEEECTTSC---------TT
T ss_pred EEcCC--CCCCHHHcCCCCccCCCCCCccchhhHHHHHhhccC----CC-----CHHHhhhhcccCCCC---------Cc
Confidence 57754 235799999999999999999999999999988632 24 379999999999983 35
Q ss_pred hhhchhccCCCCCCCC--CCCCCCCCccccccceecCCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhhhc
Q psy3351 81 DRLCELCIGRVPGEKC--TTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQY 158 (276)
Q Consensus 81 ~nLC~lC~g~~~~~~C--~~~e~Y~G~~GAfRCL~e~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 158 (276)
++||+||.|+ +.++| ++.|+||||+||||||+|+||||||||+||.++++|++
T Consensus 155 ~~LC~lC~g~-~~~~C~~~~~e~Y~Gy~GAfrCL~egGDVAFvkh~tV~~~~~g~~------------------------ 209 (342)
T 3skp_A 155 SSLCKLCMGS-GLNLCEPNNKEGYYGYTGAFRCLVEKGDVAFVKHQTVPQNTGGKN------------------------ 209 (342)
T ss_dssp SGGGTTCCCC-GGGTTCSSTTSTTCHHHHHHHHHHHTCSEEEEETTHHHHTSTTSS------------------------
T ss_pred cchhhhcCCC-CCCCCCCCCCCcCcCCcchheeeccCCcEEEEechhHHhhcCCCC------------------------
Confidence 7999999997 35689 47899999999999999999999999999999987654
Q ss_pred cCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcCCc
Q psy3351 159 SGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAK 238 (276)
Q Consensus 159 s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~~~ 238 (276)
++.|+.+++++|||||||||+|+||++|++|||+++|||+||+|+++
T Consensus 210 ---------------------------------~~~wa~~~~~~dyeLLC~dGtr~pv~~~~~C~la~vP~~aVv~r~~~ 256 (342)
T 3skp_A 210 ---------------------------------PDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLARAPNHAVVTRKDK 256 (342)
T ss_dssp ---------------------------------CSTTTTTCCGGGEEEECTTSCEEEGGGGGGSCSEEECCCEEEECGGG
T ss_pred ---------------------------------chhhhccCChhhEEEECCCCCcCCCCCCccceEEEccCCeEEecCch
Confidence 23599999999999999999999999999999999999999999854
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCC-----CC--CCCCcceE
Q psy3351 239 STQIRRYYQQFLIKTVQLFGGPVP-----PQ--RTQGKNVI 272 (276)
Q Consensus 239 ~~~~r~~~~~~L~~~~~lfg~~~~-----~~--~~~~~~~~ 272 (276)
...|+++|.++|++||++.. |+ .+.+||||
T Consensus 257 ----~~~i~~~L~~~q~~fg~~~~~~~~~F~lF~s~~kdLL 293 (342)
T 3skp_A 257 ----EACVHKILRQQQHLFGSNVTDCSGNFCLFRSETKDLL 293 (342)
T ss_dssp ----HHHHHHHHHHHHHHHSTTCSCCSSSCCTTCCSSSCSS
T ss_pred ----HHHHHHHHHHHHHHhCcCCCCCCCCccccCCCCCCcc
Confidence 35789999999999999643 44 33468876
No 2
>3tod_A Lactotransferrin; C-LOBE, metal binding protein, 1- butyl1-H-pyrazol-5-carboxy hydrolase; HET: NAG XXB; 1.38A {Bos taurus} PDB: 1sdx_A* 3u72_A* 3u8q_A* 3ugw_A* 3uk4_A* 3usd_A* 3v5a_A* 3vdf_A* 4dig_A* 4dxu_A* 4fim_A* 4fjp_A* 4for_A* 4g2z_A* 4grk_A* 2b6d_A* 2b65_A* 2doj_A* 2dp8_A* 2dqv_A* ...
Probab=100.00 E-value=2.5e-59 Score=438.96 Aligned_cols=191 Identities=37% Similarity=0.666 Sum_probs=163.1
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCCCchhhhhhhhccCCccCCcccccCCCCCCCc
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYNPIGDNS 80 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c~~~~kavs~FFs~SC~PGa~~~~y~~~~~~~ 80 (276)
|||++ +++ +|+|||||||||||++++|||+|||+.|+++. .+|+ +++||++||+||++. +
T Consensus 98 VkKs~-s~~-tl~dLrGKksCHtg~g~tAGW~iP~g~L~~~~----~~c~-----~s~FFs~sC~PG~~~---------~ 157 (335)
T 3tod_A 98 VKKAN-EGL-TWNSLKDKKSCHTAVDRTAGWNIPMGLIVNQT----GSCA-----FDEFFSQSCAPGADP---------K 157 (335)
T ss_dssp EETTC-TTC-CGGGCTTCEEEESCTTCTTTTHHHHHHHHHHH----TCSC-----GGGSSSEEECTTSCT---------T
T ss_pred EEcCC-CCC-CHHHcCCCCccCCCCCCccchhhhhhhhhhcC----CCCC-----HHHhhhhhccCCCCC---------C
Confidence 57743 365 69999999999999999999999999998762 2454 899999999999852 4
Q ss_pred hhhchhccCCC-CCCCC--CCCCCCCCccccccceec-CCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhh
Q psy3351 81 DRLCELCIGRV-PGEKC--TTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLL 156 (276)
Q Consensus 81 ~nLC~lC~g~~-~~~~C--~~~e~Y~G~~GAfRCL~e-~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 156 (276)
++||+||.|+. +.++| ++.|+||||+||||||+| +||||||||+||.++++|++
T Consensus 158 ~~LC~lC~g~~~~~~kC~~~~~e~Y~Gy~GAfrCL~eg~GDVAFvkh~tV~~~~~g~~---------------------- 215 (335)
T 3tod_A 158 SRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDTVWENTNGES---------------------- 215 (335)
T ss_dssp SGGGTTCCCSTTSTTTTCSSTTSTTCHHHHHHHHHHTTSCSEEEEEHHHHHHTSTTSC----------------------
T ss_pred cchhhhcCCCCCccCcCCCCCCCcCcCCCcceeeeccCCCcEEEEechhHHhhcCCCC----------------------
Confidence 79999999973 23689 478999999999999999 59999999999999987654
Q ss_pred hccCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcC
Q psy3351 157 QYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTS 236 (276)
Q Consensus 157 ~~s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~ 236 (276)
++.|+.+++++|||||||||+|+||++|++|||+++||||||+|+
T Consensus 216 -----------------------------------~~~wa~~~~~~dyeLLC~dG~r~pv~~~~~C~la~vP~~aVv~r~ 260 (335)
T 3tod_A 216 -----------------------------------TADWAKNLKREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSRS 260 (335)
T ss_dssp -----------------------------------CSTTTTTCCGGGEEEECTTSCEEEGGGGGGSCSEEECCCEEEECH
T ss_pred -----------------------------------chhhhccCChhheEEECCCCCcCCCCCCCcceEEEccCCEEEECC
Confidence 245999999999999999999999999999999999999999987
Q ss_pred CcchhHHHHHHHHHHHHHHHhCCCC-----CCC--CCCCcceE
Q psy3351 237 AKSTQIRRYYQQFLIKTVQLFGGPV-----PPQ--RTQGKNVI 272 (276)
Q Consensus 237 ~~~~~~r~~~~~~L~~~~~lfg~~~-----~~~--~~~~~~~~ 272 (276)
++ +..|+++|.++|++||+++ .|+ .+.+||||
T Consensus 261 ~~----~~~v~~~L~~~q~~fg~~~~~~~~~F~lF~s~~kdLL 299 (335)
T 3tod_A 261 DR----AAHVEQVLLHQQALFGKNGKNCPDKFCLFKSETKNLL 299 (335)
T ss_dssp HH----HHHHHHHHHHHHHHHSTTCTTTTTTCCTTCSTTSCCS
T ss_pred Cc----HHHHHHHHHHHHHHhCcCCCCCCCCccccCCCCCccc
Confidence 43 4578999999999999974 344 33468875
No 3
>3mc2_A Inhibitor of carbonic anhydrase; MICA, transferrin superfamily, lyase inhibitor; 2.40A {Mus musculus}
Probab=100.00 E-value=2.7e-57 Score=456.89 Aligned_cols=191 Identities=38% Similarity=0.722 Sum_probs=165.8
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCCCchhhhhhhhccCCccCCcccccCCCCCCCc
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYNPIGDNS 80 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c~~~~kavs~FFs~SC~PGa~~~~y~~~~~~~ 80 (276)
|||++ ++ .+|++||||||||||++++|||+|||+.|+++ ..+|+ +++||++||+||+.. .
T Consensus 439 Vkks~-~~-~~~~~LrGkkSCHtg~g~tAGWniP~g~L~~~----~~~c~-----~~~FFs~sC~PGa~~---------~ 498 (687)
T 3mc2_A 439 VKKSD-VG-ITWKSLQGKKSCHTAVGTSEGWNVPMGLIYDQ----TGSCK-----FDAFFSRSCAPGSDP---------D 498 (687)
T ss_dssp EESSC-SC-CCTTCCTTSCEEESCTTCCCCCCTHHHHHHTT----SCCSC-----HHHHSSSEECTTSCT---------T
T ss_pred EecCC-CC-CCHhHcCCCCCCCCCCCCccchhhhHhhhhcC----CCCCC-----HHHhccccccCCCCC---------C
Confidence 57864 24 58999999999999999999999999999976 23563 799999999999853 3
Q ss_pred hhhchhccCCC-CCCCC--CCCCCCCCccccccceecCCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhhh
Q psy3351 81 DRLCELCIGRV-PGEKC--TTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQ 157 (276)
Q Consensus 81 ~nLC~lC~g~~-~~~~C--~~~e~Y~G~~GAfRCL~e~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 157 (276)
++||+||+|+. +.++| ++.|+||||.||||||+|+||||||||+||.++++|++
T Consensus 499 ~~LC~lC~g~~~~~~kC~~~~~e~Y~Gy~GAfrCL~egGDVAFVkh~tV~en~~g~~----------------------- 555 (687)
T 3mc2_A 499 SPLCALCVGGNNPAHMCAANNAEGYHGSSGALRCLVEKGDVAFMKHPTVLQNTDGKN----------------------- 555 (687)
T ss_dssp STTBSSCCCCSSTTCTTCSSSSSTTCHHHHHHHHHHHTCSEEEECTTCSTTTSTTSC-----------------------
T ss_pred cchHHhcCCCCCCCCcCCCCCCCcCcCCchhHHhhccCCeEEEEeCCcHHhhcCCCC-----------------------
Confidence 79999999973 23678 57899999999999999999999999999999988764
Q ss_pred ccCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcCC
Q psy3351 158 YSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSA 237 (276)
Q Consensus 158 ~s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~~ 237 (276)
++.||.+++++|||||||||+|+||++|++|||+++|+||||+|++
T Consensus 556 ----------------------------------~~~wa~~l~~~dyeLLC~dgtr~pv~~~~~C~La~vP~haVv~r~~ 601 (687)
T 3mc2_A 556 ----------------------------------PEPWAKGLKHEDFELLCLDGTRKPVTEAQSCHLARVPNRAVFSRKD 601 (687)
T ss_dssp ----------------------------------CSGGGSSCCTTTEEEECSSSCEEETTCTTTSCSEEECCCEEEECSS
T ss_pred ----------------------------------chhhhhccCccceEEECCCCCcCCCCCCCcceeEeccCCeEEECCC
Confidence 2459999999999999999999999999999999999999999997
Q ss_pred cchhHHHHHHHHHHHHHHHhCCCCC----CC--CCCCcceE
Q psy3351 238 KSTQIRRYYQQFLIKTVQLFGGPVP----PQ--RTQGKNVI 272 (276)
Q Consensus 238 ~~~~~r~~~~~~L~~~~~lfg~~~~----~~--~~~~~~~~ 272 (276)
++ ..|+++|.++|++||++.. |+ .+.+||||
T Consensus 602 ~~----~~i~~~L~~~q~~fg~~~~~~~~F~lF~S~~kdLL 638 (687)
T 3mc2_A 602 KA----DFVRRILFNQQELFGRNGFEYMMFQMFESSAKDLL 638 (687)
T ss_dssp SH----HHHHHHHHHHHHHHSTTCCSSSSCCSSCCSSSCSS
T ss_pred cH----HHHHHHHHHHHHHhCcCCCCCCCceeccCCCCCcc
Confidence 54 4689999999999998543 44 34689986
No 4
>3v83_A Serotransferrin; iron binding domain, iron carrier/transporter, transferrin R serum, metal transport; HET: P6G; 2.10A {Homo sapiens} PDB: 3v8x_B* 3qyt_A* 4h0w_A* 3ve1_B 2hav_A* 3s9l_C* 3s9m_C* 3s9n_C* 2hau_A* 1jnf_A 1h76_A*
Probab=100.00 E-value=2.1e-56 Score=451.00 Aligned_cols=190 Identities=37% Similarity=0.744 Sum_probs=165.1
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCCCchhhhhhhhccCCccCCcccccCCCCCCCc
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYNPIGDNS 80 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c~~~~kavs~FFs~SC~PGa~~~~y~~~~~~~ 80 (276)
|||++ ++ .+|+|||||||||||++++|||++||+.|+++ +.+|+ +++||++||+||+.. +
T Consensus 451 Vkks~-s~-~t~~dLrGKksCHtg~~~tAGw~iP~g~L~~~----~~~c~-----~~~FFs~sC~PG~~~---------~ 510 (698)
T 3v83_A 451 VKKSA-SD-LTWDNLKGKKSCHTAVGRTAGWNIPMGLLYNK----INHCR-----FDEFFSEGCAPGSKK---------D 510 (698)
T ss_dssp EETTS-CC-CCSSTTTTCEEEESCTTCTTTTHHHHHHHHHH----HCSSC-----HHHHSSEEECTTSCT---------T
T ss_pred EecCC-CC-CCHHHhCCCCccCCCCCCccccchhheehhcC----CCCCC-----HHHhhhhhccCCCCC---------C
Confidence 57754 25 48999999999999999999999999999987 23463 799999999999843 4
Q ss_pred hhhchhccCCCCCCCC--CCCCCCCCccccccceecCCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhhhc
Q psy3351 81 DRLCELCIGRVPGEKC--TTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQY 158 (276)
Q Consensus 81 ~nLC~lC~g~~~~~~C--~~~e~Y~G~~GAfRCL~e~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 158 (276)
++||+||+|+ +.++| +++|+||||.||||||+|+||||||||+||.++++|++
T Consensus 511 ~~LC~lC~g~-~~~kC~~~~~e~Y~Gy~GAfrCL~egGDVAFvkh~tv~~n~~g~~------------------------ 565 (698)
T 3v83_A 511 SSLCKLCMGS-GLNLCEPNNKEGYYGYTGAFRCLVEKGDVAFVKHQTVPQNTGGKN------------------------ 565 (698)
T ss_dssp SGGGTTCCCC-GGGTTCSSTTSTTCHHHHHHHHHHHTCSEEEEETTHHHHTSTTSS------------------------
T ss_pred cchHHhcCCC-CCCcCCCCCcCcCcCCcchHhhhccCCeEEEEeCCcHHhhcCCCC------------------------
Confidence 7999999997 34689 57899999999999999999999999999999998764
Q ss_pred cCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcCCc
Q psy3351 159 SGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAK 238 (276)
Q Consensus 159 s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~~~ 238 (276)
++.||.+++++|||||||||+|+||++|++|||+++|+||||+|+++
T Consensus 566 ---------------------------------~~~wa~~~~~~dyeLLC~dG~r~~v~~~~~C~La~vP~~aVv~r~~~ 612 (698)
T 3v83_A 566 ---------------------------------PDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLARAPNHAVVTRKDK 612 (698)
T ss_dssp ---------------------------------CSTTTTTCCGGGEEECCTTSCCCBGGGGGGSCSEEECCCEEEECGGG
T ss_pred ---------------------------------chhhhhccCcccEEEECCCCCcCCccCCCccceeeccCceEEecCch
Confidence 24599999999999999999999999999999999999999999864
Q ss_pred chhHHHHHHHHHHHHHHHhCCCC-----CCC--CCCCcceE
Q psy3351 239 STQIRRYYQQFLIKTVQLFGGPV-----PPQ--RTQGKNVI 272 (276)
Q Consensus 239 ~~~~r~~~~~~L~~~~~lfg~~~-----~~~--~~~~~~~~ 272 (276)
+..|+++|.++|++||+++ .|+ .+.+||||
T Consensus 613 ----~~~v~~~L~~~q~~fg~~~~~~~~~F~lF~s~~kdLl 649 (698)
T 3v83_A 613 ----EACVHKILRQQQHLFGSNVTDCSGNFCLFRSETKDLL 649 (698)
T ss_dssp ----HHHHHHHHHHHHHHHSTTCCCSSSSCCTTCCTTSCCS
T ss_pred ----HHHHHHHHHHHHHHhCCCCcccCCCceeccCCCCCcc
Confidence 3468999999999999853 344 34688886
No 5
>1iej_A Ovotransferrin; iron, metal binding protein; 1.65A {Gallus gallus} SCOP: c.94.1.2 PDB: 1tfa_A 1nft_A 1nnt_A 1ovb_A 1gv8_A 1gvc_A*
Probab=100.00 E-value=6e-55 Score=407.12 Aligned_cols=179 Identities=41% Similarity=0.837 Sum_probs=160.9
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCCC--chhhhhhhhccCCccCCcccccCCCCCC
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCN--NHVKSVINYFGPSCAVNALINKYNPIGD 78 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c~--~~~kavs~FFs~SC~PGa~~~~y~~~~~ 78 (276)
|||+| +| +|+||||||+||||+++++||++|++.|+++|+|++.+|+ +..+++++||++||+||+++
T Consensus 98 VkkdS--~i-sl~dLkGKksChtg~~stsGw~~Pi~~L~~~g~i~~~~~~~~~~~~a~s~fF~~sC~pG~~~-------- 166 (332)
T 1iej_A 98 VKKGT--EF-TVNDLQGKTSCHTGLGRSAGWNIPIGTLLHRGAIEWEGIESGSVEQAVAKFFSASCVPGATI-------- 166 (332)
T ss_dssp EETTC--CC-CGGGCTTCEEEESCTTCTTTTHHHHHHHHHTTSSCCCCGGGCCHHHHHHHHSSEEECTTCCS--------
T ss_pred EeCCC--CC-CHHHHCCCceEcCCCCCccchHHHHHHHHHcCCCCccccccchHHHHHHHhccccccCCCCc--------
Confidence 57777 56 7999999999999999999999999999999999998884 57899999999999999854
Q ss_pred CchhhchhccCCCCCCCCCCCCCCCCccccccceec-CCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhhh
Q psy3351 79 NSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQ 157 (276)
Q Consensus 79 ~~~nLC~lC~g~~~~~~C~~~e~Y~G~~GAfRCL~e-~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 157 (276)
.++||+||.|+ +.++|+.+|+||||.||||||+| +||||||+|+||.+++.
T Consensus 167 -~~~LC~lC~g~-~~~~C~~~~~y~Gy~GA~rCL~eg~GDVAFvk~~~v~~~~~-------------------------- 218 (332)
T 1iej_A 167 -EQKLCRQCKGD-PKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTVNENAP-------------------------- 218 (332)
T ss_dssp -CGGGGTTCCSC-TTTTTSTTSTTCHHHHHHHHHHTTSCSEEEEETTHHHHHCT--------------------------
T ss_pred -ccchhhhhcCC-CcccCCCCcccCCchHHHHHHHhCCCcEEEEeccchhhhcc--------------------------
Confidence 28999999997 45799889999999999999999 59999999999986531
Q ss_pred ccCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcCC
Q psy3351 158 YSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSA 237 (276)
Q Consensus 158 ~s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~~ 237 (276)
..++||+||||||+|+||++|++|||+++|+|+||+|++
T Consensus 219 -----------------------------------------~~~~dy~lLC~dg~r~pv~~~~~C~la~vP~~aVv~r~d 257 (332)
T 1iej_A 219 -----------------------------------------DQKDEYELLCLDGSRQPVDNYKTCNWARVAAHAVVARDD 257 (332)
T ss_dssp -----------------------------------------TSGGGEEEECTTSCEEEGGGTTTSCSEEEECCEEEECSS
T ss_pred -----------------------------------------cccccceEECCCCCccCcCcCccceeccCCCceEEEcCC
Confidence 147899999999999999999999999999999999998
Q ss_pred cchhHHHHHHHHHHHHHHHhCCCCC
Q psy3351 238 KSTQIRRYYQQFLIKTVQLFGGPVP 262 (276)
Q Consensus 238 ~~~~~r~~~~~~L~~~~~lfg~~~~ 262 (276)
.+.+ +|+++|+++|++||++..
T Consensus 258 ~~~~---~i~~~l~~~~~~fg~~~~ 279 (332)
T 1iej_A 258 NKVE---DIWSFLSKAQSDFGVDTK 279 (332)
T ss_dssp TTHH---HHHHHHHHHHHHHSTTCS
T ss_pred CCHH---HHHHHHHHHHHHhcCCCC
Confidence 7633 599999999999998754
No 6
>1h45_A Lactoferrin; metal transport, iron transport, metal binding; 1.95A {Homo sapiens} SCOP: c.94.1.2 PDB: 1eh3_A 2pms_A* 1h43_A 1h44_A 1dsn_A 1lct_A 1hse_A 1vfe_A 1l5t_A 1vfd_A 1lgb_C* 1z6v_A 1z6w_A
Probab=100.00 E-value=1.3e-54 Score=404.87 Aligned_cols=192 Identities=32% Similarity=0.653 Sum_probs=164.6
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCCC-chhhhhhhhccCCccCCcccccCCCCCCC
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCN-NHVKSVINYFGPSCAVNALINKYNPIGDN 79 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c~-~~~kavs~FFs~SC~PGa~~~~y~~~~~~ 79 (276)
|||+| +| +|+||||||+||||+++++||++|++.|+ ++|++..|+ +.++++++||++||+||+++.+|
T Consensus 99 Vkk~s--~i-sl~dLkGKksch~~~~stsGw~iP~~~L~--~~i~~~~~~~~~~~a~~~fFs~sC~pg~~~~~y------ 167 (334)
T 1h45_A 99 VKKGG--SF-QLNELQGLKSCHTGLRRTAGWNVPIGTLR--PFLDWTGPPEPIEAAVARFFSASCVPGADKGQF------ 167 (334)
T ss_dssp EETTC--CC-CGGGCTTCEEEESCTTCTTTTHHHHHHHG--GGSCCCCTTSCHHHHHHHHSSEEECTTSCTTTC------
T ss_pred EeCCC--CC-CHHHHCCCceecCCCCCccchhHHHHHHH--hhcCcCCCcchhhHHHHHhccccccCCCCccch------
Confidence 57777 56 89999999999999999999999999999 688887664 67899999999999999976555
Q ss_pred chhhchhccCCCCCCCC--CCCCCCCCccccccceec-CCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhh
Q psy3351 80 SDRLCELCIGRVPGEKC--TTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLL 156 (276)
Q Consensus 80 ~~nLC~lC~g~~~~~~C--~~~e~Y~G~~GAfRCL~e-~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 156 (276)
++||+||.|+ +.++| ++.|+||||.||||||+| +||||||+|+||.+++.+
T Consensus 168 -~~LC~lC~g~-~~~~C~~s~~~~y~G~~GA~rCL~eg~gDVAFv~~~~v~~~~~~------------------------ 221 (334)
T 1h45_A 168 -PNLCRLCAGT-GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIGESTVFEDLSD------------------------ 221 (334)
T ss_dssp -GGGTTTCCCC-GGGTTCSSTTSTTCHHHHHHHHHHTTSCSEEEEETTHHHHHCCC------------------------
T ss_pred -hhHHHhcCCC-CCCccCCCCCccccCchHHHHHHHhCCCcEEEEecchhhhhhcc------------------------
Confidence 7999999997 34688 678999999999999999 599999999999865432
Q ss_pred hccCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcC
Q psy3351 157 QYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTS 236 (276)
Q Consensus 157 ~~s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~ 236 (276)
+.+.+||+||||||+|+||++|++|||+++|+|+||+|+
T Consensus 222 -----------------------------------------~~~~~dy~lLC~dg~~~pv~~~~~C~la~vP~~avv~r~ 260 (334)
T 1h45_A 222 -----------------------------------------EAERDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARS 260 (334)
T ss_dssp -----------------------------------------HHHHTTEEEEETTTEEEEGGGGGGSCSEEEECCEEEEES
T ss_pred -----------------------------------------cCCccceEEECCCCCccCcCCCccceecccCCceEEEcC
Confidence 123679999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHhCCCCC--CC---CCC-CcceE
Q psy3351 237 AKSTQIRRYYQQFLIKTVQLFGGPVP--PQ---RTQ-GKNVI 272 (276)
Q Consensus 237 ~~~~~~r~~~~~~L~~~~~lfg~~~~--~~---~~~-~~~~~ 272 (276)
+.+. ++.|+++|+++|++||.+.. |+ .++ |||||
T Consensus 261 ~~~~--~~~i~~~l~~~~~~fg~~~~~~f~lF~s~~~~k~Ll 300 (334)
T 1h45_A 261 VNGK--EDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLL 300 (334)
T ss_dssp SSCC--HHHHHHHHHHHHHHHSTTTCSSCCTTCCCTTCCCSS
T ss_pred CCCh--HHHHHHHHHHHHHHhccCCCcccCccCCCccCCCCc
Confidence 7653 56799999999999998842 33 323 47765
No 7
>1cb6_A Protein (lactoferrin); iron transport, apolactoferrin, conformational change; 2.00A {Homo sapiens} SCOP: c.94.1.2 c.94.1.2 PDB: 1bka_A 1b0l_A 1lfi_A* 1fck_A 1lcf_A* 2bjj_X* 1lfh_A 1n76_A 1lfg_A* 1sqy_A* 1b1x_A 1b7u_A 1b7z_A 1i6b_A 1qjm_A 3cr9_A* 1f9b_A* 1dtz_A 1i6q_A 1jw1_A ...
Probab=100.00 E-value=4.5e-54 Score=433.56 Aligned_cols=192 Identities=32% Similarity=0.652 Sum_probs=165.5
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCCC-chhhhhhhhccCCccCCcccccCCCCCCC
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCN-NHVKSVINYFGPSCAVNALINKYNPIGDN 79 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c~-~~~kavs~FFs~SC~PGa~~~~y~~~~~~ 79 (276)
|||++ +| +|+|||||||||||++++|||+|||+.|+++ |.+..|+ +.++++++||++||+||+++.+|
T Consensus 98 Vkk~s--~~-~l~dLkGkksCHtg~g~taGw~iPi~~L~~~--i~~~~~~~~~~~a~s~FFs~SC~PG~~~~~y------ 166 (691)
T 1cb6_A 98 VKKGG--SF-QLNELQGLKSCHTGLRRTAGWNVPIGTLRPF--LNWTGPPEPIEAAVARFFSASCVPGADKGQF------ 166 (691)
T ss_dssp EETTC--CC-CGGGCTTCEEEESCTTCTTTTHHHHHHSGGG--SCCCCTTSCHHHHHHHHSSEEECTTCCTTTC------
T ss_pred EECCC--CC-CHHHhCCCCcccCCCCCccchhhHHHHHHHh--ccccCCcchHHHHHHHhcCcccCCCCCcccc------
Confidence 67887 45 7999999999999999999999999999988 7777664 57899999999999999987655
Q ss_pred chhhchhccCCCCCCCC--CCCCCCCCccccccceec-CCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhh
Q psy3351 80 SDRLCELCIGRVPGEKC--TTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLL 156 (276)
Q Consensus 80 ~~nLC~lC~g~~~~~~C--~~~e~Y~G~~GAfRCL~e-~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 156 (276)
+|||+||.|+ +..+| +++|+||||+||||||+| +||||||||+||.+++
T Consensus 167 -~~LC~lC~g~-~~~~C~~~~~e~Y~Gy~GAfrCL~eg~GDVAFvkh~tv~~~~-------------------------- 218 (691)
T 1cb6_A 167 -PNLCRLCAGT-GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVFEDL-------------------------- 218 (691)
T ss_dssp -GGGGTTCCCC-GGGTTCSSTTSTTCHHHHHHHHHHTTSCSEEEEETHHHHHHC--------------------------
T ss_pred -hhhhHhhcCC-CcCccCCCCcccCcCcHHHHHHHHhcCCcEEEEecceecccc--------------------------
Confidence 7999999997 44688 788999999999999999 6999999999998653
Q ss_pred hccCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcC
Q psy3351 157 QYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTS 236 (276)
Q Consensus 157 ~~s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~ 236 (276)
+...+++||+||||||+|+||++|++|||+++|||+||+|+
T Consensus 219 ---------------------------------------~~~~~~~dyeLLC~dGtr~pv~~~~~C~la~vP~~aVv~r~ 259 (691)
T 1cb6_A 219 ---------------------------------------SDEAERDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARS 259 (691)
T ss_dssp ---------------------------------------CSTTTGGGEEEECTTSCEEEGGGTTTSCSEEEECCEEEEES
T ss_pred ---------------------------------------cccCCccceEEECCCCCcCCcccCccceecccCCceEEEcC
Confidence 33456789999999999999999999999999999999998
Q ss_pred CcchhHHHHHHHHHHHHHHHhCCCCC--CC---CC-CCcceE
Q psy3351 237 AKSTQIRRYYQQFLIKTVQLFGGPVP--PQ---RT-QGKNVI 272 (276)
Q Consensus 237 ~~~~~~r~~~~~~L~~~~~lfg~~~~--~~---~~-~~~~~~ 272 (276)
+.. .+..|+++|+++|++||++.. |+ .+ .+||||
T Consensus 260 ~~~--~~~~i~~~L~~~~~~fg~~~~~~F~lF~s~~~~kdLL 299 (691)
T 1cb6_A 260 VNG--KEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLL 299 (691)
T ss_dssp SSC--CHHHHHHHHHHHHHHHSTTSCSSCCSSCCCTTCCCSS
T ss_pred Ccc--hHHHHHHHHHHHHHHhccCCCCcccccCCcccCCCcc
Confidence 765 245789999999999998753 33 22 347865
No 8
>2d3i_A Ovotransferrin; aluminum, metal-binding, transport, metal transport; 2.15A {Gallus gallus} SCOP: c.94.1.2 c.94.1.2 PDB: 1ovt_A 1aiv_A* 1n04_A 1ryx_A 1dot_A* 1aov_A* 1iq7_A*
Probab=100.00 E-value=1.1e-53 Score=430.59 Aligned_cols=179 Identities=42% Similarity=0.835 Sum_probs=158.4
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCCC--chhhhhhhhccCCccCCcccccCCCCCC
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCN--NHVKSVINYFGPSCAVNALINKYNPIGD 78 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c~--~~~kavs~FFs~SC~PGa~~~~y~~~~~ 78 (276)
|||++ +| +|+|||||||||||++++|||+|||+.|+++++|++.+|+ +.++++++||++||+||+++
T Consensus 98 Vkk~s--~~-tl~dLkGKksCHtg~g~taGw~iPi~~L~~~g~i~~~~~~~~~~~~a~s~FFs~SC~PG~~~-------- 166 (686)
T 2d3i_A 98 VKKGT--EF-TVNDLQGKTSCHTGLGRSAGWNIPIGTLIHRGAIEWEGIESGSVEQAVAKFFSASCVPGATI-------- 166 (686)
T ss_dssp EETTC--CC-CGGGCTTCEEEESCTTCTTTTHHHHHHHHHTTSSCCCSGGGCCHHHHHHHHSSEEECTTCCS--------
T ss_pred EECCC--CC-CHHHhCCCccccCCCCCccchHHHHHHHHHcCCccccccccccHHHHHHHhcCCcccCCCCC--------
Confidence 57777 55 7999999999999999999999999999999999999884 57899999999999999854
Q ss_pred CchhhchhccCCCCCCCCCCCCCCCCccccccceec-CCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhhh
Q psy3351 79 NSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQ 157 (276)
Q Consensus 79 ~~~nLC~lC~g~~~~~~C~~~e~Y~G~~GAfRCL~e-~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 157 (276)
.++||+||.|+ +..+|+.+|+||||+||||||+| +||||||||+||.+++.
T Consensus 167 -~~~LC~lC~g~-~~C~~~~~e~Y~Gy~GAfrCL~eg~GDVAFvkh~tv~~~~~-------------------------- 218 (686)
T 2d3i_A 167 -EQKLCRQCKGD-PKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTVNENAP-------------------------- 218 (686)
T ss_dssp -CGGGTTTCCSC-TTTTTSTTSTTCHHHHHHHHHHTTSCSEEEEETTHHHHHCG--------------------------
T ss_pred -ccchhhhcCCC-CCcCCCCcccCcCcHHHHHHHHhcCCcEEEEecceeccccc--------------------------
Confidence 28999999998 33445888999999999999999 69999999999986532
Q ss_pred ccCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcCC
Q psy3351 158 YSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSA 237 (276)
Q Consensus 158 ~s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~~ 237 (276)
. +++|||||||||+|+||++|++|||+++|||+||+|++
T Consensus 219 ---------------------------------------~--~~~dyeLLC~dGtr~pv~~~~~C~la~vP~~aVv~r~~ 257 (686)
T 2d3i_A 219 ---------------------------------------D--QKDEYELLCLDGSRQPVDNYKTCNWARVAAHAVVARDD 257 (686)
T ss_dssp ---------------------------------------G--GGGGEEEECTTSCEECGGGGGGSCSEEEECCEEEECSS
T ss_pred ---------------------------------------c--CccceEEECCCCCcCCCccCccceecccCCceEEEcCC
Confidence 1 17799999999999999999999999999999999987
Q ss_pred cchhHHHHHHHHHHHHHHHhCCCCC
Q psy3351 238 KSTQIRRYYQQFLIKTVQLFGGPVP 262 (276)
Q Consensus 238 ~~~~~r~~~~~~L~~~~~lfg~~~~ 262 (276)
.. +.+|+++|.++|++||++..
T Consensus 258 ~~---~~~i~~~L~~~~~~fg~~~~ 279 (686)
T 2d3i_A 258 NK---VEDIWSFLSKAQSDFGVDTK 279 (686)
T ss_dssp TT---HHHHHHHHHHHHHHHSTTCC
T ss_pred CC---HHHHHHHHHHHHHHhccCCC
Confidence 65 24689999999999998744
No 9
>3v83_A Serotransferrin; iron binding domain, iron carrier/transporter, transferrin R serum, metal transport; HET: P6G; 2.10A {Homo sapiens} PDB: 3v8x_B* 3qyt_A* 4h0w_A* 3ve1_B 2hav_A* 3s9l_C* 3s9m_C* 3s9n_C* 2hau_A* 1jnf_A 1h76_A*
Probab=100.00 E-value=9.8e-54 Score=431.64 Aligned_cols=187 Identities=39% Similarity=0.757 Sum_probs=159.7
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCC-CchhhhhhhhccCCccCCcccccCCCCCCC
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDC-NNHVKSVINYFGPSCAVNALINKYNPIGDN 79 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c-~~~~kavs~FFs~SC~PGa~~~~y~~~~~~ 79 (276)
|||++ +|+ |+||||||+||||++++|||++||+.|+ +.+.+| ++.++++++||++||+||+++.+|
T Consensus 120 Vkk~s--~~~-l~dLrGKksChtg~g~taGw~iPi~~L~----~~~~~~~~~~~~avs~FFs~SC~PG~~~~~y------ 186 (698)
T 3v83_A 120 VKKDS--GFQ-MNQLRGKKSCHTGLGRSAGWNIPIGLLY----CDLPEPRKPLEKAVANFFSGSCAPCADGTDF------ 186 (698)
T ss_dssp EESSC--CCC-GGGCTTCCEEESCTTCTTTTHHHHHHHG----GGSCSCCCSHHHHHHHHSSSEECTTSCTTTC------
T ss_pred EeCCC--CCC-HHHcCCCCcccCCCCCcccHHHHHHHHe----eccCCCCchHHHHHHHhhhccccCCCCCCcC------
Confidence 68876 664 9999999999999999999999999995 455544 356789999999999999976544
Q ss_pred chhhchhccCCCCCCCCCCCCCCCCccccccceec-CCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhhhc
Q psy3351 80 SDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQY 158 (276)
Q Consensus 80 ~~nLC~lC~g~~~~~~C~~~e~Y~G~~GAfRCL~e-~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 158 (276)
+|||+||.| ..|+++|+||||+||||||+| +||||||||+||.+++.++
T Consensus 187 -~~LC~LC~g----C~~s~~e~Y~Gy~GAfrCL~eg~GDVAFVk~~tV~e~~~~~------------------------- 236 (698)
T 3v83_A 187 -PQLCQLCPG----CGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFENLANK------------------------- 236 (698)
T ss_dssp -GGGGTTSTT----CCSSTTSTTCHHHHHHHHHHTTSCSEEEEETTHHHHHCCCH-------------------------
T ss_pred -hhhhhhccC----CCCCCCCcCcCchhHHHhhhcCCCcEEEEEchhhhhhccCC-------------------------
Confidence 799999988 567889999999999999999 5999999999999876432
Q ss_pred cCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcCCc
Q psy3351 159 SGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAK 238 (276)
Q Consensus 159 s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~~~ 238 (276)
.+++|||||||||+|+||++|++|||+++|||+||+|++.
T Consensus 237 ----------------------------------------~~~~dyeLLC~DGtr~pv~~~~~C~la~vP~~aVv~r~~~ 276 (698)
T 3v83_A 237 ----------------------------------------ADRDQYELLCLDNTRKPVDEYKDCHLAQVPSHTVVARSMG 276 (698)
T ss_dssp ----------------------------------------HHHTTEEEECTTSCEECGGGGGGSCSEEEECCEEEEETTS
T ss_pred ----------------------------------------CChhheEEecCCCCcCCCCCCCCCeeeeccCceEEEcCCc
Confidence 1378999999999999999999999999999999999864
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCC--CC---CCCCcceE
Q psy3351 239 STQIRRYYQQFLIKTVQLFGGPVP--PQ---RTQGKNVI 272 (276)
Q Consensus 239 ~~~~r~~~~~~L~~~~~lfg~~~~--~~---~~~~~~~~ 272 (276)
. ..+.|+++|..+|++||++.. ++ ...|||||
T Consensus 277 ~--~~~~i~~~L~~~q~~fg~~~~~~F~lF~s~~~kdLl 313 (698)
T 3v83_A 277 G--KEDLIWELLNQAQEHFGKDKSKEFQLFSSPHGKDLL 313 (698)
T ss_dssp S--CHHHHHHHHHHHHHHHSTTCCCSCCTTCCTTCSSSS
T ss_pred c--hHHHHHHHHHHHHHHhCcCCCCcceeecCCCCCcee
Confidence 3 346799999999999998643 33 34578865
No 10
>3mc2_A Inhibitor of carbonic anhydrase; MICA, transferrin superfamily, lyase inhibitor; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-53 Score=430.21 Aligned_cols=186 Identities=34% Similarity=0.692 Sum_probs=159.1
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCCCchhhhhhhhccCCccCCcccccCCCCCCCc
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYNPIGDNS 80 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c~~~~kavs~FFs~SC~PGa~~~~y~~~~~~~ 80 (276)
|||++ +| +|+||||||+||||++++|||++||+.|+. .| +.++++++||++||+||+++.+ +
T Consensus 107 VkK~s--~i-~l~dLrGKksCHtg~g~taGw~iPi~~L~~-------~~-~~~~avs~FFs~SCvPG~~~~~-------y 168 (687)
T 3mc2_A 107 AKKGT--GF-QLNQLRGKKSCHTGLGWSAGWYVPLSTLLP-------SG-SRETAAATFFSSSCVPCADGKM-------F 168 (687)
T ss_dssp EETTT--CC-CTTTTTTCEEEESCTTCTTTTHHHHHHTCC-------TT-CCSSSHHHHSSEEECTTSCTTT-------C
T ss_pred EECCC--CC-CHHHcCCCCcccCCCCCccchhhhHHHhcC-------CC-chhHHHHHhhhhcccCCcCCCc-------c
Confidence 68876 56 599999999999999999999999999971 34 5689999999999999997644 4
Q ss_pred hhhchhccCCCCCCCC--CCCCCCCCccccccceec-CCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhhh
Q psy3351 81 DRLCELCIGRVPGEKC--TTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQ 157 (276)
Q Consensus 81 ~nLC~lC~g~~~~~~C--~~~e~Y~G~~GAfRCL~e-~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 157 (276)
++||+||.|+ +.++| ++.|+||||+||||||+| +||||||||+||.+++.++
T Consensus 169 ~~LC~lC~g~-~~~~C~~~~~e~Y~Gy~GA~rCL~eg~GDVAFvkh~tV~e~~~~~------------------------ 223 (687)
T 3mc2_A 169 PSLCQLCAGK-GTDKCACSSREPYFGSWGALKCLQDGTADVSFVKHLTVFEAMPTK------------------------ 223 (687)
T ss_dssp GGGBSSCCCC-TTSTTCSSTTSSSCHHHHTTHHHHTTSCSEEEEEHHHHTTSCSST------------------------
T ss_pred hHHHhhcCCC-CCCcCCCCCCCcCcCccchhhhhhhCCCcEEEEEchhhhhhcCCC------------------------
Confidence 7999999997 34678 568999999999999999 6999999999998876432
Q ss_pred ccCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcCC
Q psy3351 158 YSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSA 237 (276)
Q Consensus 158 ~s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~~ 237 (276)
.+++||+||||||+|+||++|++|||+++|||+||+|++
T Consensus 224 -----------------------------------------~~~~dyeLLCpDGtr~pv~~~~~C~la~~P~~aVv~r~~ 262 (687)
T 3mc2_A 224 -----------------------------------------ADRDQYELLCMDNTRRPVEEYEQCYLARVPSHVVVARSV 262 (687)
T ss_dssp -----------------------------------------TTTTTEEEECTTSCEEETTCGGGSCSEEEECCEEEEESS
T ss_pred -----------------------------------------CCcccEEEEcCCCCcCCCCCCCCCceecccCceEEEccC
Confidence 248899999999999999999999999999999999986
Q ss_pred cchhHHHHHHHHHHHHHHHhCCCCC--CC---CCCCcceE
Q psy3351 238 KSTQIRRYYQQFLIKTVQLFGGPVP--PQ---RTQGKNVI 272 (276)
Q Consensus 238 ~~~~~r~~~~~~L~~~~~lfg~~~~--~~---~~~~~~~~ 272 (276)
.. ....|+++|..+|++||++.. ++ ...|||||
T Consensus 263 ~~--~~~~i~~~L~~~q~~fg~~~~~~f~lF~s~~gkdLl 300 (687)
T 3mc2_A 263 DG--KEDSIQELLRVAQEHFGKDKSSPFQLFGSPHGEDLL 300 (687)
T ss_dssp SS--CHHHHHHHHHHHHHHSSSSSSSSCCSSCCSSSSSCS
T ss_pred cc--hHHHHHHHHHHHHHHhccCCCccceeecCCCCceee
Confidence 53 346799999999999998643 33 34578864
No 11
>2d3i_A Ovotransferrin; aluminum, metal-binding, transport, metal transport; 2.15A {Gallus gallus} SCOP: c.94.1.2 c.94.1.2 PDB: 1ovt_A 1aiv_A* 1n04_A 1ryx_A 1dot_A* 1aov_A* 1iq7_A*
Probab=100.00 E-value=2.6e-53 Score=427.80 Aligned_cols=190 Identities=38% Similarity=0.724 Sum_probs=165.9
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCCCchhhhhhhhccCCccCCcccccCCCCCCCc
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYNPIGDNS 80 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c~~~~kavs~FFs~SC~PGa~~~~y~~~~~~~ 80 (276)
|||++ + .+|+||||||+||||++++|||+||++.|++++ .+|+ +++||+.||+||+.. +
T Consensus 437 Vkk~s--~-~tl~dLkGkksChtg~gstaGw~iP~~~L~~~~----~~c~-----~~~fFs~sC~pg~~~---------~ 495 (686)
T 2d3i_A 437 ARKDS--N-VNWNNLKGKKSCHTAVGRTAGWVIPMGLIHNRT----GTCN-----FDEYFSEGCAPGSPP---------N 495 (686)
T ss_dssp EESSS--C-CCTTSCTTSEEEESCTTCTTTTHHHHHHHHHHH----CCCC-----GGGTSSEEECTTSCT---------T
T ss_pred EecCC--C-CCHHHhcCCCcccCCCCCCcchhhHHHHHhhCC----Cccc-----HHHhCcccccCCCCC---------c
Confidence 57666 4 489999999999999999999999999999886 2564 899999999999843 4
Q ss_pred hhhchhccCCCC--CCCC--CCCCCCCCccccccceecCCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhh
Q psy3351 81 DRLCELCIGRVP--GEKC--TTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLL 156 (276)
Q Consensus 81 ~nLC~lC~g~~~--~~~C--~~~e~Y~G~~GAfRCL~e~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 156 (276)
++||+||+|+.. .++| +++|+||||.||||||+|+||||||||+||.++++|++
T Consensus 496 ~~lC~lC~g~~~~~~~~C~~~~~e~Y~Gy~GAfrCL~egGDVAFvkh~tv~~~~~g~~---------------------- 553 (686)
T 2d3i_A 496 SRLCQLCQGSGGIPPEKCVASSHEKYFGYTGALRCLVEKGDVAFIQHSTVEENTGGKN---------------------- 553 (686)
T ss_dssp SGGGTTCCCCSSSSCCTTCSSTTSTTCHHHHHHHHHHHTCSEEEEETTHHHHTSTTCC----------------------
T ss_pred hhhhhhccCCCccccCccCCCCcccccCcchhHHhhccCCcEEEEechhHHhhccCCC----------------------
Confidence 789999999742 3589 47899999999999999999999999999999998764
Q ss_pred hccCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcC
Q psy3351 157 QYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTS 236 (276)
Q Consensus 157 ~~s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~ 236 (276)
++.||.+++++|||||||||+|+||++|+.|||+++|+|+||+|+
T Consensus 554 -----------------------------------~~~wa~~l~~~d~eLLCpdg~r~~v~~~~~C~la~~p~~avv~r~ 598 (686)
T 2d3i_A 554 -----------------------------------KADWAKNLQMDDFELLCTDGRRANVMDYRECNLAEVPTHAVVVRP 598 (686)
T ss_dssp -----------------------------------CSTTTTTCCGGGEEEECTTSCEEEGGGGGGSCSEEECCCEEEECG
T ss_pred -----------------------------------cchhhccCCccceEEECCCCCcCCcccCCcccccccCCCeEEecc
Confidence 246999999999999999999999999999999999999999987
Q ss_pred CcchhHHHHHHHHHHHHHHHhCCCCC----CC--CCCCcceE
Q psy3351 237 AKSTQIRRYYQQFLIKTVQLFGGPVP----PQ--RTQGKNVI 272 (276)
Q Consensus 237 ~~~~~~r~~~~~~L~~~~~lfg~~~~----~~--~~~~~~~~ 272 (276)
++ +..|+++|+++|++||++.+ |+ .++.||||
T Consensus 599 ~~----~~~v~~~l~~~q~~fg~~~~~~~~F~lf~s~~~nlL 636 (686)
T 2d3i_A 599 EK----ANKIRDLLERQEKRFGVNGSEKSKFMMFESQNKDLL 636 (686)
T ss_dssp GG----HHHHHHHHHHHHHHHSTTCTTTTTCCTTCCSSSCCS
T ss_pred cH----HHHHHHHHHHHHHHhCcCCCCCCceEecCCCCCCCC
Confidence 64 36899999999999999965 34 33567765
No 12
>1blf_A Lactoferrin; transferrin, iron-binding protein, carbohydrate structure; HET: NAG BMA MAN; 2.80A {Bos taurus} SCOP: c.94.1.2 c.94.1.2 PDB: 1lfc_A
Probab=100.00 E-value=2.4e-52 Score=420.62 Aligned_cols=192 Identities=34% Similarity=0.719 Sum_probs=165.4
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCC-CchhhhhhhhccCCccCCcccccCCCCCCC
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDC-NNHVKSVINYFGPSCAVNALINKYNPIGDN 79 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c-~~~~kavs~FFs~SC~PGa~~~~y~~~~~~ 79 (276)
|||+| +| +|+||||||+||||++++|||++||+.|+++ |.+..| ++.++++++||++||+||+++.+|
T Consensus 98 Vkk~s--~~-tl~dLkGKksChtg~~~taGw~iPi~~L~~~--i~~~~~~~~~~~a~s~fFs~SC~PG~~~~~y------ 166 (689)
T 1blf_A 98 VKKGS--NF-QLDQLQGRKSCHTGLGRSAGWIIPMGILRPY--LSWTESLEPLQGAVAKFFSASCVPCIDRQAY------ 166 (689)
T ss_dssp EESSC--CC-CSTTCTTCCEEESCTTCTTTTHHHHHHHHHH--HTCCTTTSCHHHHHHTTSSSEECTTSCTTTC------
T ss_pred EeCCC--CC-CHHHhCCCceecCCCCCccchHHHHHHHHHh--cCccCCcchHHHHHHHhcCccccCCCCcccc------
Confidence 67887 56 7999999999999999999999999999988 777765 467899999999999999977655
Q ss_pred chhhchhccCCCCCCCC--CCCCCCCCccccccceec-CCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhh
Q psy3351 80 SDRLCELCIGRVPGEKC--TTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLL 156 (276)
Q Consensus 80 ~~nLC~lC~g~~~~~~C--~~~e~Y~G~~GAfRCL~e-~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 156 (276)
+|||+||.|+ +.++| ++.|+||||.||||||+| +||||||+|+||.+++.++
T Consensus 167 -~~LC~lC~g~-~~~~C~~~~~e~Y~Gy~GA~rCL~eg~GDVAFvk~~tv~~~~~~~----------------------- 221 (689)
T 1blf_A 167 -PNLCQLCKGE-GENQCACSSREPYFGYSGAFKCLQDGAGDVAFVKETTVFENLPEK----------------------- 221 (689)
T ss_dssp -GGGSTTCCCC-TTSTTCSSTTSTTCHHHHHHHHHHTTSCSEEEEETTHHHHHCCSH-----------------------
T ss_pred -hhhhHhccCC-CcCccCCCCCccccCchHHHHHHHHcCCcEEEEeccccchhhccc-----------------------
Confidence 7999999997 45689 688999999999999999 5999999999998765321
Q ss_pred hccCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcC
Q psy3351 157 QYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTS 236 (276)
Q Consensus 157 ~~s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~ 236 (276)
...+||+||||||+|+||++|++|||+++|+|+||+|+
T Consensus 222 ------------------------------------------~~~~dy~lLC~dG~r~pv~~~~~C~la~vP~~aVv~r~ 259 (689)
T 1blf_A 222 ------------------------------------------ADRDQYELLCLNNSRAPVDAFKECHLAQVPSHAVVARS 259 (689)
T ss_dssp ------------------------------------------HHHTTEEECCTTSCCBCTTCTTTSCSEEEECCEEEEES
T ss_pred ------------------------------------------CCcccceEECCCCCccCcCcCccceecCcCCceEEEcC
Confidence 23679999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHhCCCCC--CC---CC-CCcceE
Q psy3351 237 AKSTQIRRYYQQFLIKTVQLFGGPVP--PQ---RT-QGKNVI 272 (276)
Q Consensus 237 ~~~~~~r~~~~~~L~~~~~lfg~~~~--~~---~~-~~~~~~ 272 (276)
+... ++.|+++|+++|++||++.. |+ .+ .+||||
T Consensus 260 ~~~~--~~~i~~~L~~~~~~fg~~~~~~F~lF~s~~~~~dLl 299 (689)
T 1blf_A 260 VDGK--EDLIWKLLSKAQEKFGKNKSRSFQLFGSPPGQRDLL 299 (689)
T ss_dssp SSCC--HHHHHHHHHHHHHHSSTTCCSSCCTTCCCTTSCCCS
T ss_pred CccH--HHHHHHHHHHHHHHhccCCCcccccccCCccCCCcc
Confidence 7652 56799999999999998754 33 22 347865
No 13
>1ryo_A Serotransferrin; iron transport, metal transport; 1.20A {Homo sapiens} SCOP: c.94.1.2 PDB: 1bp5_A 1btj_A 1n84_A 1oqg_A 2o84_X 1fqf_A 1fqe_A 1oqh_A 2o7u_B 1jqf_A 1n7x_A 3fgs_A 1a8e_A 1a8f_A 1suv_C 1dtg_A 1d3k_A 1d4n_A 1n7w_A 1b3e_A ...
Probab=100.00 E-value=2.7e-51 Score=381.59 Aligned_cols=188 Identities=39% Similarity=0.737 Sum_probs=160.0
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCCCchhhhhhhhccCCccCCcccccCCCCCCCc
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYNPIGDNS 80 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c~~~~kavs~FFs~SC~PGa~~~~y~~~~~~~ 80 (276)
|||+| +| +|+||||||+||||+++++||++|++.|+++ .+.. ++ +..+++++||++||+||+++.+|
T Consensus 101 VkkdS--~i-sl~dLkGKk~ch~~~~stsG~~iP~~~L~~~-~~~~-~~-~~~~~~~~fF~~sC~pg~~~~~y------- 167 (327)
T 1ryo_A 101 VKKDS--GF-QMNQLRGKKSCHTGLGRSAGWNIPIGLLYCD-LPEP-RK-PLEKAVANFFSGSCAPCADGTDF------- 167 (327)
T ss_dssp EETTC--CC-CGGGCTTCCEEESCTTCTTTTHHHHHHHGGG-SCSC-CC-SHHHHHHHHSSSEECTTSCTTTC-------
T ss_pred EeCCC--CC-ChHHhCCCceEcCCCCCcchhhhHHHHHHhh-cccc-cc-cchhhHHHhccccccCCcccccc-------
Confidence 57776 56 7999999999999999999999999999987 3322 12 67899999999999999976554
Q ss_pred hhhchhccCCCCCCCCCCCCCCCCccccccceec-CCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhhhcc
Q psy3351 81 DRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQYS 159 (276)
Q Consensus 81 ~nLC~lC~g~~~~~~C~~~e~Y~G~~GAfRCL~e-~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~s 159 (276)
+|||+||.| ..|++.|+|+||+||||||+| +||||||+|++|.++.
T Consensus 168 ~~LC~lC~g----C~~~~~~~y~G~~gA~rcL~eG~gDVAfv~~~~v~~~~----------------------------- 214 (327)
T 1ryo_A 168 PQLCQLCPG----CGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFENL----------------------------- 214 (327)
T ss_dssp GGGGTTSTT----CCSSTTSTTCHHHHHHHHHHTTSCSEEEEETTHHHHHC-----------------------------
T ss_pred chhhhhccc----CCCCCCCCccCcHHHHHHHHcCCccEEEEeccchhhhh-----------------------------
Confidence 799999998 233788999999999999999 5999999999997543
Q ss_pred CCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcCCcc
Q psy3351 160 GGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKS 239 (276)
Q Consensus 160 ~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~~~~ 239 (276)
+.+++.+||+||||||+|+||++|++|||+++|+|+||+|++..
T Consensus 215 ------------------------------------~~~~~~~d~~lLc~dg~~~pi~~~~~C~l~~~P~~~vv~r~~~~ 258 (327)
T 1ryo_A 215 ------------------------------------ANKADRDQYELLCLDNTRKPVDEYKDCHLAQVPSHTVVARSMGG 258 (327)
T ss_dssp ------------------------------------CSHHHHTTEEEECTTSCEEEGGGGGGSCSEEEECCEEEECSSSC
T ss_pred ------------------------------------hhcccccceeEEccCCcccCCCCCCcceeccCCCceEEEeCCCC
Confidence 23345789999999999999999999999999999999998765
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCC--CC---CCCCcceE
Q psy3351 240 TQIRRYYQQFLIKTVQLFGGPVP--PQ---RTQGKNVI 272 (276)
Q Consensus 240 ~~~r~~~~~~L~~~~~lfg~~~~--~~---~~~~~~~~ 272 (276)
. .+.|+++|+++|++||++.. |+ .+.+||||
T Consensus 259 ~--~~~i~~~l~~~~~~fg~~~~~~F~lF~s~~~knll 294 (327)
T 1ryo_A 259 K--EDLIWELLNQAQEHFGKDKSKEFQLFSSPHGKDLL 294 (327)
T ss_dssp C--HHHHHHHHHHHHHHHSTTTCSSCCTTCCTTCSSSS
T ss_pred H--HHHHHHHHHHHHHHhCcCCCCceeeeCCCCCCCCC
Confidence 3 36799999999999998765 33 44568875
No 14
>1blf_A Lactoferrin; transferrin, iron-binding protein, carbohydrate structure; HET: NAG BMA MAN; 2.80A {Bos taurus} SCOP: c.94.1.2 c.94.1.2 PDB: 1lfc_A
Probab=100.00 E-value=3.8e-51 Score=411.97 Aligned_cols=191 Identities=37% Similarity=0.676 Sum_probs=166.2
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCCCchhhhhhhhccCCccCCcccccCCCCCCCc
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYNPIGDNS 80 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c~~~~kavs~FFs~SC~PGa~~~~y~~~~~~~ 80 (276)
|||++ .+.+|+||||||+||||++++|||++|++.|++++. +|+ +++||++||+||+.+ +
T Consensus 439 Vkk~s--~~~t~~dLkGkksChtg~~~taGw~iP~~~L~~~~~----~c~-----~~~fFs~sC~PG~~~---------~ 498 (689)
T 1blf_A 439 VKKAN--EGLTWNSLKDKKSCHTAVDRTAGWNIPMGLIVNQTG----SCA-----FDEFFSQSCAPGADP---------K 498 (689)
T ss_dssp EETTS--TTCCSGGGTTSEEEESCTTCTTTTHHHHHHHHHHHT----CSC-----GGGTSSEEECTTSCT---------T
T ss_pred EEcCC--CcCCHHHHcCCCcccCCCCCCcchhhhHHHHhhCCC----CCc-----HHHhcCCcccCCCCC---------c
Confidence 57766 357899999999999999999999999999999872 564 899999999999854 4
Q ss_pred hhhchhccCCC-CCCCCC--CCCCCCCccccccceec-CCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhh
Q psy3351 81 DRLCELCIGRV-PGEKCT--TADPYAGFEGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLL 156 (276)
Q Consensus 81 ~nLC~lC~g~~-~~~~C~--~~e~Y~G~~GAfRCL~e-~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 156 (276)
++||+||+|+. +.++|. +.|+||||.||||||+| +||||||+|+||.++++|++
T Consensus 499 ~~lC~lC~g~~~~~~~C~~~~~e~Y~Gy~GA~rCL~eg~gDVAFv~~~tv~~~~~g~~---------------------- 556 (689)
T 1blf_A 499 SRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDTVWENTNGES---------------------- 556 (689)
T ss_dssp STTSTTCCCSSSCCSTTCSSTTSTTCHHHHHHHHHHTTSSSEEEEEHHHHHHTSTTSC----------------------
T ss_pred hhHHHhhcCCCccccccCCCCcccccCchHHHHHHHcCCCcEEEecchhHHHhhccCC----------------------
Confidence 78999999974 236894 78999999999999999 59999999999999998764
Q ss_pred hccCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcC
Q psy3351 157 QYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTS 236 (276)
Q Consensus 157 ~~s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~ 236 (276)
++.|+.+++++||+||||||+|+||++|++|||+++|+|+||+|+
T Consensus 557 -----------------------------------~~~wa~~~~~~d~~LLC~dg~r~~v~~~~~C~l~~vP~~~Vv~r~ 601 (689)
T 1blf_A 557 -----------------------------------TADWAKNLNREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSRS 601 (689)
T ss_dssp -----------------------------------CSTTTTTCCGGGEEEECTTSCEEETTCCSSSCSEEECCCEEEECT
T ss_pred -----------------------------------chhhhhhccccceEEECCCCCccCcccCccceeccCCCceEEECC
Confidence 246999999999999999999999999999999999999999998
Q ss_pred CcchhHHHHHHHHHHHHHHHhCCCCC-----CC--CCCCcceE
Q psy3351 237 AKSTQIRRYYQQFLIKTVQLFGGPVP-----PQ--RTQGKNVI 272 (276)
Q Consensus 237 ~~~~~~r~~~~~~L~~~~~lfg~~~~-----~~--~~~~~~~~ 272 (276)
+++ +.|+++|+++|++||++.. |+ .++.||||
T Consensus 602 ~~~----~~i~~~l~~~~~~fg~~~~~~~~~F~lf~s~~~nll 640 (689)
T 1blf_A 602 DRA----AHVKQVLLHQQALFGKNGKNCPDKFCLFKSETKNLL 640 (689)
T ss_dssp TTH----HHHHHHHHHHHHHHSTTCSSTTTTCCTTCSSSSCCS
T ss_pred chH----HHHHHHHHHHHHHhCcCCCCCCCCeeccCCCCCCCc
Confidence 653 6789999999999999854 33 23567765
No 15
>1cb6_A Protein (lactoferrin); iron transport, apolactoferrin, conformational change; 2.00A {Homo sapiens} SCOP: c.94.1.2 c.94.1.2 PDB: 1bka_A 1b0l_A 1lfi_A* 1fck_A 1lcf_A* 2bjj_X* 1lfh_A 1n76_A 1lfg_A* 1sqy_A* 1b1x_A 1b7u_A 1b7z_A 1i6b_A 1qjm_A 3cr9_A* 1f9b_A* 1dtz_A 1i6q_A 1jw1_A ...
Probab=100.00 E-value=4.2e-51 Score=411.99 Aligned_cols=191 Identities=34% Similarity=0.647 Sum_probs=166.2
Q ss_pred CccCCcCCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCCccccCCCchhhhhhhhccCCccCCcccccCCCCCCCc
Q psy3351 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALINKYNPIGDNS 80 (276)
Q Consensus 1 vkk~s~~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~i~~~~c~~~~kavs~FFs~SC~PGa~~~~y~~~~~~~ 80 (276)
|||++ .+.+|+||||||+||||++++|||++|++.|++++ .+|+ +++||++||+||+.. +
T Consensus 441 Vkk~s--~~~t~~dLkGkksChtg~~~taGw~iP~~~L~~~~----~~c~-----~~~fFs~sC~PG~~~---------~ 500 (691)
T 1cb6_A 441 VRRSD--TSLTWNSVKGKKSCHTAVDRTAGWNIPMGLLFNQT----GSCK-----FDEYFSQSCAPGSDP---------R 500 (691)
T ss_dssp EESSC--TTCCGGGCTTSEEEESCTTCTTTTHHHHHHHHHHH----CCCC-----GGGTSSEEECTTSCT---------T
T ss_pred EEcCC--CcCCHHHHCCCCcccCCCCCchHHHHHHHHHHhCC----CCCc-----HHHhcCCcccCCCCC---------c
Confidence 57766 35789999999999999999999999999999986 2564 899999999999854 4
Q ss_pred hhhchhccCCC-CCCCCC--CCCCCCCccccccceec-CCcEEEEechhhHhhhhcccccccccccchhhhhhHHHHHhh
Q psy3351 81 DRLCELCIGRV-PGEKCT--TADPYAGFEGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLL 156 (276)
Q Consensus 81 ~nLC~lC~g~~-~~~~C~--~~e~Y~G~~GAfRCL~e-~GDVAFvkh~tV~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 156 (276)
++||+||+|+. +.++|. +.|+||||.||||||+| +||||||+|+||.++++|++
T Consensus 501 ~~lC~lC~g~~~~~~~C~~~~~e~Y~Gy~GA~rCL~eg~gDVAFvk~~tv~~~~~g~~---------------------- 558 (691)
T 1cb6_A 501 SNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQNTDGNN---------------------- 558 (691)
T ss_dssp SGGGTTCCCSTTSCSTTCSSTTSTTCHHHHHHHHHHTTSCSEEEEEHHHHHTTSTTSS----------------------
T ss_pred hhhHHhhcCCCccccccCCCCcccccCchhHHHHHHcCCCcEEEecchhHHHhhcCCC----------------------
Confidence 79999999974 236894 78999999999999999 59999999999999998764
Q ss_pred hccCCcccCCccceeccccccchhhcchhhhhhhcccccccCCCccCeEEecCCCCCccCCCCccceeeeeCCceEEEcC
Q psy3351 157 QYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTS 236 (276)
Q Consensus 157 ~~s~g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~dfeLLCpdGtr~pv~~~~~Cnl~~vP~~aVvt~~ 236 (276)
++.|+.+++++||+||||||+|+||++|++|||+++|+|+||+|+
T Consensus 559 -----------------------------------~~~wa~~~~~~d~~LLC~dg~r~~v~~~~~C~la~vP~~aVv~r~ 603 (691)
T 1cb6_A 559 -----------------------------------NEAWAKDLKLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRM 603 (691)
T ss_dssp -----------------------------------CSHHHHTCCGGGEEEECTTSCEEEGGGGGGSCSEEECCCEEEECG
T ss_pred -----------------------------------chhhhhhcCccceEEECCCCCcCCccccccccccccCCceEEECc
Confidence 246899999999999999999999999999999999999999988
Q ss_pred CcchhHHHHHHHHHHHHHHHhCCCCCC-----C--CCCCcceE
Q psy3351 237 AKSTQIRRYYQQFLIKTVQLFGGPVPP-----Q--RTQGKNVI 272 (276)
Q Consensus 237 ~~~~~~r~~~~~~L~~~~~lfg~~~~~-----~--~~~~~~~~ 272 (276)
++ ++.|+++|+++|++||++... + .++.||||
T Consensus 604 ~~----~~~i~~~l~~~~~~fg~~~~~~~~~F~lF~s~~~nll 642 (691)
T 1cb6_A 604 DK----VERLKQVLLHQQAKFGRNGSDCPDKFCLFQSETKNLL 642 (691)
T ss_dssp GG----HHHHHHHHHHHHHHHSTTCSSTTTTCCTTCSSSCCCS
T ss_pred cH----HHHHHHHHHHHHHHhccCCCCCCCceeccCCCCCCCC
Confidence 65 367999999999999998543 3 23567765
No 16
>3skp_A Serotransferrin; iron binding protein, transferrin receptor, TBP metal binding protein; 1.70A {Homo sapiens} PDB: 3v89_B 1suv_E
Probab=98.02 E-value=4.6e-07 Score=85.42 Aligned_cols=30 Identities=60% Similarity=1.007 Sum_probs=26.9
Q ss_pred Cccceeccccccchhhcchhhhhhhccccc
Q psy3351 166 TGAFRCLVDKGEVAFLKHTTVQEMIEGRID 195 (276)
Q Consensus 166 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (276)
+||||||+|.|||||+||+||.||++|.+.
T Consensus 181 ~GAfrCL~egGDVAFvkh~tV~~~~~g~~~ 210 (342)
T 3skp_A 181 TGAFRCLVEKGDVAFVKHQTVPQNTGGKNP 210 (342)
T ss_dssp HHHHHHHHHTCSEEEEETTHHHHTSTTSSC
T ss_pred cchheeeccCCcEEEEechhHHhhcCCCCc
Confidence 589999998899999999999998887744
No 17
>3tod_A Lactotransferrin; C-LOBE, metal binding protein, 1- butyl1-H-pyrazol-5-carboxy hydrolase; HET: NAG XXB; 1.38A {Bos taurus} PDB: 1sdx_A* 3u72_A* 3u8q_A* 3ugw_A* 3uk4_A* 3usd_A* 3v5a_A* 3vdf_A* 4dig_A* 4dxu_A* 4fim_A* 4fjp_A* 4for_A* 4g2z_A* 4grk_A* 2b6d_A* 2b65_A* 2doj_A* 2dp8_A* 2dqv_A* ...
Probab=97.97 E-value=7.1e-07 Score=83.94 Aligned_cols=30 Identities=53% Similarity=0.893 Sum_probs=26.5
Q ss_pred Cccceecccc-ccchhhcchhhhhhhccccc
Q psy3351 166 TGAFRCLVDK-GEVAFLKHTTVQEMIEGRID 195 (276)
Q Consensus 166 t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 195 (276)
+||||||+|. |||||+||+||.|+++|.+.
T Consensus 186 ~GAfrCL~eg~GDVAFvkh~tV~~~~~g~~~ 216 (335)
T 3tod_A 186 TGAFRCLAEDVGDVAFVKNDTVWENTNGEST 216 (335)
T ss_dssp HHHHHHHHTTSCSEEEEEHHHHHHTSTTSCC
T ss_pred CcceeeeccCCCcEEEEechhHHhhcCCCCc
Confidence 4899999976 99999999999998877744
No 18
>1iej_A Ovotransferrin; iron, metal binding protein; 1.65A {Gallus gallus} SCOP: c.94.1.2 PDB: 1tfa_A 1nft_A 1nnt_A 1ovb_A 1gv8_A 1gvc_A*
Probab=96.57 E-value=0.00026 Score=66.13 Aligned_cols=22 Identities=73% Similarity=1.241 Sum_probs=20.1
Q ss_pred Cccceeccc-cccchhhcchhhh
Q psy3351 166 TGAFRCLVD-KGEVAFLKHTTVQ 187 (276)
Q Consensus 166 t~~~~~~~~-~~~~~~~~~~~~~ 187 (276)
+||||||++ +|||||++|+||.
T Consensus 192 ~GA~rCL~eg~GDVAFvk~~~v~ 214 (332)
T 1iej_A 192 SGAFHCLKDGKGDVAFVKHTTVN 214 (332)
T ss_dssp HHHHHHHHTTSCSEEEEETTHHH
T ss_pred hHHHHHHHhCCCcEEEEeccchh
Confidence 489999996 6999999999986
No 19
>1h45_A Lactoferrin; metal transport, iron transport, metal binding; 1.95A {Homo sapiens} SCOP: c.94.1.2 PDB: 1eh3_A 2pms_A* 1h43_A 1h44_A 1dsn_A 1lct_A 1hse_A 1vfe_A 1l5t_A 1vfd_A 1lgb_C* 1z6v_A 1z6w_A
Probab=96.50 E-value=0.0003 Score=65.62 Aligned_cols=23 Identities=57% Similarity=1.022 Sum_probs=20.5
Q ss_pred Cccceeccc-cccchhhcchhhhh
Q psy3351 166 TGAFRCLVD-KGEVAFLKHTTVQE 188 (276)
Q Consensus 166 t~~~~~~~~-~~~~~~~~~~~~~~ 188 (276)
+||||||++ +|||||++|+||.|
T Consensus 194 ~GA~rCL~eg~gDVAFv~~~~v~~ 217 (334)
T 1h45_A 194 SGAFKCLRDGAGDVAFIGESTVFE 217 (334)
T ss_dssp HHHHHHHHTTSCSEEEEETTHHHH
T ss_pred hHHHHHHHhCCCcEEEEecchhhh
Confidence 489999996 69999999999863
No 20
>1ryo_A Serotransferrin; iron transport, metal transport; 1.20A {Homo sapiens} SCOP: c.94.1.2 PDB: 1bp5_A 1btj_A 1n84_A 1oqg_A 2o84_X 1fqf_A 1fqe_A 1oqh_A 2o7u_B 1jqf_A 1n7x_A 3fgs_A 1a8e_A 1a8f_A 1suv_C 1dtg_A 1d3k_A 1d4n_A 1n7w_A 1b3e_A ...
Probab=93.34 E-value=0.01 Score=55.22 Aligned_cols=22 Identities=59% Similarity=1.149 Sum_probs=19.6
Q ss_pred Cccceeccc-cccchhhcchhhh
Q psy3351 166 TGAFRCLVD-KGEVAFLKHTTVQ 187 (276)
Q Consensus 166 t~~~~~~~~-~~~~~~~~~~~~~ 187 (276)
+||||||++ +|||||++|+||.
T Consensus 189 ~gA~rcL~eG~gDVAfv~~~~v~ 211 (327)
T 1ryo_A 189 SGAFKCLKDGAGDVAFVKHSTIF 211 (327)
T ss_dssp HHHHHHHHTTSCSEEEEETTHHH
T ss_pred HHHHHHHHcCCccEEEEeccchh
Confidence 489999996 6999999999973
No 21
>3ix1_A N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine protein; periplasmic N-formyl-4-amino-5-aminomethyl-2-methylpyrimidin protein; HET: NFM; 2.40A {Bacillus halodurans c-125}
Probab=37.25 E-value=9.2 Score=32.35 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=21.6
Q ss_pred CCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCC
Q psy3351 8 DLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGG 43 (276)
Q Consensus 8 ~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~ 43 (276)
+|++++||||||-.-++- +.+..+....|.+.|+
T Consensus 97 ~i~s~~DL~Gk~i~~~~~--~~~~~~~~~~l~~~Gl 130 (302)
T 3ix1_A 97 DFDSPADLVGLTVGYPGI--PVNEPILKTMVEAAGG 130 (302)
T ss_dssp CCSSGGGGTTSEEEECSC--TTHHHHHHHHHHHTTC
T ss_pred CCCChHHcCCCEEEeCCC--cchHHHHHHHHHHcCC
Confidence 789999999999866553 2334443344444443
No 22
>3uif_A Sulfonate ABC transporter, periplasmic sulfonate- protein SSUA; structural genomics; 2.60A {Methylobacillus flagellatus}
Probab=33.63 E-value=13 Score=32.42 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=21.7
Q ss_pred CCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCC
Q psy3351 8 DLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGG 43 (276)
Q Consensus 8 ~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~ 43 (276)
+|++++||||||-.-+ ..+.+..+....|...|+
T Consensus 110 ~i~s~~DLkGk~I~v~--~gs~~~~~~~~~l~~~Gl 143 (348)
T 3uif_A 110 TAKSIKDLKGKKIALH--RGRPWELAFSNLLQSEGL 143 (348)
T ss_dssp CCCSGGGGTTSEEEEC--TTSTHHHHHHHHHHHTTC
T ss_pred CCCCHHHcCCCEEEec--CCChHHHHHHHHHHHcCC
Confidence 6899999999997654 233334444445545553
No 23
>3ksx_A Nitrate transport protein; SSUA, alkanesulfonate-binding protein, periplasmic-binding P transport protein; HET: MPO; 1.70A {Xanthomonas axonopodis PV} PDB: 3e4r_A* 3ksj_A*
Probab=31.22 E-value=12 Score=32.06 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=21.2
Q ss_pred CCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhcCC
Q psy3351 8 DLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGG 43 (276)
Q Consensus 8 ~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~~~ 43 (276)
.|++++||||||-.-+ . .+....+....|.+.|+
T Consensus 122 ~I~s~~DLkGk~i~v~-~-gs~~~~~~~~~l~~~Gl 155 (324)
T 3ksx_A 122 ALRTVADLKGKRIAFQ-K-GSSAHNLLLRVLAKSGL 155 (324)
T ss_dssp SCCSGGGGTTCEEEEC-T-TSHHHHHHHHHHHHTTC
T ss_pred CCCCHHHhCCCEEEec-C-CChHHHHHHHHHHHcCC
Confidence 6899999999997654 2 23333343444545554
No 24
>3qsl_A Putative exported protein; unknown, structural genomics, PSI-biology, midwest center FO structural genomics, MCSG, unknown function; HET: MSE CIT; 2.00A {Bordetella bronchiseptica}
Probab=29.41 E-value=14 Score=31.16 Aligned_cols=33 Identities=18% Similarity=0.397 Sum_probs=21.1
Q ss_pred CCCCccCcCCCCCCCCCCCCCCCcchHhHHHHHhc
Q psy3351 7 PDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRN 41 (276)
Q Consensus 7 ~~i~~~~dLkGkksCHtG~g~taGW~~Pv~~L~~~ 41 (276)
++|++++||+|||-.-++.+.+. ..-+..++++
T Consensus 128 ~~i~s~~DL~Gk~i~~~~~gs~~--~~~~~~~l~~ 160 (346)
T 3qsl_A 128 PGYKGPADLKGRKIGVTAPGSST--NMVVNFFLAK 160 (346)
T ss_dssp TTCCSGGGGTTCEEEESSTTSHH--HHHHHHHHHH
T ss_pred cCCCChHHcCCCEEEECCCCcHH--HHHHHHHHHH
Confidence 37899999999987766554432 3334444443
No 25
>1jxc_A Putative trypsin inhibitor ATTI-2; chymotrypsin inhibitor, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: g.3.7.5
Probab=23.91 E-value=11 Score=28.15 Aligned_cols=11 Identities=45% Similarity=1.090 Sum_probs=9.8
Q ss_pred cceec-CCcEEE
Q psy3351 110 RCLVD-KGEVAF 120 (276)
Q Consensus 110 RCL~e-~GDVAF 120 (276)
.||+| +|||.|
T Consensus 10 eCLkeYggDVgf 21 (68)
T 1jxc_A 10 ECLKEYGGDVGF 21 (68)
T ss_dssp CCCCBCCSSCST
T ss_pred HHHHHhCCcCCc
Confidence 59999 999987
No 26
>2de3_A Dibenzothiophene desulfurization enzyme B; alpha-beta, hydrolase; HET: OBP; 1.60A {Rhodococcus SP} PDB: 2de4_A* 2de2_A
Probab=23.20 E-value=21 Score=32.20 Aligned_cols=17 Identities=18% Similarity=0.370 Sum_probs=14.6
Q ss_pred CCCccCcCCCCCCCCCC
Q psy3351 8 DLTHISHLRGKKACFAG 24 (276)
Q Consensus 8 ~i~~~~dLkGkksCHtG 24 (276)
+|++++||||||-.-+.
T Consensus 110 ~I~s~~DLkGk~Igv~~ 126 (365)
T 2de3_A 110 PITAAADLAGRRIGVSA 126 (365)
T ss_dssp SCCSGGGGTTCEEEECH
T ss_pred CCCCHHHhCCCeEEeec
Confidence 78999999999976654
No 27
>3n5l_A Binding protein component of ABC phosphonate TRAN; structural genomics, joint center for structural genomics; HET: UNL; 1.97A {Pseudomonas aeruginosa}
Probab=21.71 E-value=14 Score=32.44 Aligned_cols=37 Identities=11% Similarity=0.285 Sum_probs=27.4
Q ss_pred ccCCcCCCCccCcC----CCCCCCCCCCCCCCcchHhHHHHHh
Q psy3351 2 KKNSLPDLTHISHL----RGKKACFAGVGTQAGWVIPVDVLIR 40 (276)
Q Consensus 2 kk~s~~~i~~~~dL----kGkksCHtG~g~taGW~~Pv~~L~~ 40 (276)
++++ +|++++|| |||+-..+..+.+.|+.++...|++
T Consensus 99 ~~ds--~i~sl~DL~~~~kgk~ia~~~~gs~~~~l~~~~~l~~ 139 (310)
T 3n5l_A 99 NKDS--KIDSLEDMLANAKSLTFGNGDPNSTSGYLVPGYYVFA 139 (310)
T ss_dssp ETTC--SCCSHHHHHHTGGGCEEEECCTTCTTTTHHHHHHTTT
T ss_pred ECCC--CCCCHHHHhhhcCCCEEEecCCCccHhHHHHHHHHHH
Confidence 4554 68999999 9998876666667888887765544
No 28
>3p7i_A PHND, subunit of alkylphosphonate ABC transporter; phosphonate binding protein, transport protein; 1.71A {Escherichia coli UTI89} PDB: 3qk6_A 3quj_A* 3s4u_A
Probab=21.32 E-value=15 Score=32.87 Aligned_cols=37 Identities=14% Similarity=0.301 Sum_probs=27.3
Q ss_pred ccCCcCCCCccCcC----CCCCCCCCCCCCCCcchHhHHHHHh
Q psy3351 2 KKNSLPDLTHISHL----RGKKACFAGVGTQAGWVIPVDVLIR 40 (276)
Q Consensus 2 kk~s~~~i~~~~dL----kGkksCHtG~g~taGW~~Pv~~L~~ 40 (276)
++++ +|++++|| |||+--....+.+.|+.+|...|+.
T Consensus 109 ~~ds--~i~sl~DL~~~~kgk~va~~~~gsts~~l~~~~~l~~ 149 (321)
T 3p7i_A 109 NKDS--PINNLNDLLAKRKDLTFGNGDPNSTSGFLVPGYYVFA 149 (321)
T ss_dssp ETTC--SCCSHHHHHHTGGGCEEEECCTTCTTTTHHHHHHTTG
T ss_pred ECCC--CCCCHHHHHhhcCCCEEEeCCCCccHHHHHHHHHHHH
Confidence 4555 68999999 9998765555667888888775543
Done!