RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3351
(276 letters)
>d2d3ia2 c.94.1.2 (A:335-686) Ovotransferrin {Chicken (Gallus
gallus) [TaxId: 9031]}
Length = 352
Score = 120 bits (302), Expect = 1e-32
Identities = 71/250 (28%), Positives = 104/250 (41%), Gaps = 81/250 (32%)
Query: 12 ISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNALIN 71
++L+GKK+C VG AGWVIP+ ++ G + YF CA
Sbjct: 111 WNNLKGKKSCHTAVGRTAGWVIPMGLIHNRTG---------TCNFDEYFSEGCA------ 155
Query: 72 KYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEMIE 131
P + RLC+LC G G +C+ E
Sbjct: 156 ---PGSPPNSRLCQLCQGS-------------GGIPPEKCVASSHE-------------- 185
Query: 132 GRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAFLKHTTVQEMIE 191
+Y G TGA RCLV+KG+VAF++H+TV+E
Sbjct: 186 -------------------------KYFGY----TGALRCLVEKGDVAFIQHSTVEENTG 216
Query: 192 GRID---AYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQ 248
G+ A L ++FELLCTDG R V +Y+ CN +VP++AV+ K+ +IR ++
Sbjct: 217 GKNKADWAKNLQMDDFELLCTDGRRANVMDYRECNLAEVPTHAVVVRPEKANKIRDLLER 276
Query: 249 FLIKTVQLFG 258
+ FG
Sbjct: 277 QE----KRFG 282
>d1gv8a_ c.94.1.2 (A:) Ovotransferrin {Duck (Anas platyrhynchos)
[TaxId: 8839]}
Length = 159
Score = 114 bits (287), Expect = 2e-32
Identities = 55/144 (38%), Positives = 72/144 (50%), Gaps = 18/144 (12%)
Query: 2 KKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEV--IDCNNHVKSVINY 59
KK + I LRGK +C G+G AGW IP+ LI G +E I+ + ++V +
Sbjct: 9 KKGTD---FMIKDLRGKTSCHTGLGRSAGWNIPIGTLIHRGDIEWEGIESGSVEQAVAKF 65
Query: 60 FGPSCAVNALINKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEV 118
F SC P +LC C G KC PY+G+ GAF+CL D KG+V
Sbjct: 66 FSASCV---------PGATTEQKLCRQCKGDAK-TKCLRNAPYSGYSGAFQCLKDGKGDV 115
Query: 119 AFLKHTTVQEMIEGRIDACKYSFL 142
AF+KHTTVQE D +Y L
Sbjct: 116 AFVKHTTVQENAPEEKD--EYELL 137
Score = 83.5 bits (206), Expect = 2e-20
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 8/65 (12%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D KG+VAF+KHTTVQE K+ +ELLC DGTRQPVD+Y++CNW
Sbjct: 102 SGAFQCLKDGKGDVAFVKHTTVQENAPEE-------KDEYELLCLDGTRQPVDSYKTCNW 154
Query: 225 GQVPS 229
+V +
Sbjct: 155 ARVAA 159
>d1ce2a1 c.94.1.2 (A:1-333) Lactoferrin {Domestic water buffalo
(Bubalus arnee bubalis) [TaxId: 89462]}
Length = 333
Score = 117 bits (295), Expect = 8e-32
Identities = 64/250 (25%), Positives = 92/250 (36%), Gaps = 75/250 (30%)
Query: 10 THISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNAL 69
+ L+G+ +C G+G AGW IP+ +L +V +F SC
Sbjct: 104 FQLDQLQGRNSCHTGLGRSAGWNIPMGILRPYLSWTE-SLEPLQGAVAKFFSASCVPCVD 162
Query: 70 INKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEM 129
Y LC+LC G EG +C E
Sbjct: 163 RQAY-------PNLCQLCKG----------------EGENQCACSPRE------------ 187
Query: 130 IEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQE 188
Y G +GAF+CL D G+VAF+K TTV E
Sbjct: 188 ---------------------------PYFGY----SGAFKCLQDGAGDVAFVKETTVFE 216
Query: 189 MIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQ 248
+ + D ++ +ELLC + TR PVD ++ C+ QVPS+AV+ S +
Sbjct: 217 NLPEKAD-----RDQYELLCLNNTRAPVDAFKECHLAQVPSHAVVARSVDGK--EDLIWK 269
Query: 249 FLIKTVQLFG 258
L K + FG
Sbjct: 270 LLSKAQEKFG 279
>d1lgbc_ c.94.1.2 (C:) Lactoferrin {Human (Homo sapiens) [TaxId:
9606]}
Length = 159
Score = 113 bits (283), Expect = 1e-31
Identities = 49/226 (21%), Positives = 77/226 (34%), Gaps = 76/226 (33%)
Query: 2 KKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFG 61
KK ++ L+G K+C G+ AGW +P+ L +V +F
Sbjct: 9 KKGGS---FQLNELQGLKSCHTGLRRTAGWNVPIGTLRPFLNW-TGPPEPIEAAVARFFS 64
Query: 62 PSCAVNALINKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFL 121
SC A ++ LC LC G +C E
Sbjct: 65 ASCVPGADKGQF-------PNLCRLCAGTGEN----------------KCAFSSQE---- 97
Query: 122 KHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAF 180
Y +GAF+CL D G+VAF
Sbjct: 98 -----------------------------------PYFSY----SGAFKCLKDGAGDVAF 118
Query: 181 LKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQ 226
++ +TV E + + ++ +ELLC D TR+PVD ++ C+ +
Sbjct: 119 IRESTVFEDLSDEAE-----RDEYELLCPDNTRKPVDKFKDCHLAR 159
>d1h76a2 c.94.1.2 (A:342-687) Transferrin {Pig (Sus scrofa) [TaxId:
9823]}
Length = 346
Score = 116 bits (291), Expect = 4e-31
Identities = 74/261 (28%), Positives = 106/261 (40%), Gaps = 82/261 (31%)
Query: 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYF 60
+KK+S PDL ++L+GKK+C V AGW IP+ +L D +F
Sbjct: 96 VKKSSGPDLN-WNNLKGKKSCHTAVDRTAGWNIPMGLLYNKINSCKFD---------QFF 145
Query: 61 GPSCAVNALINKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAF 120
G CA + N LC LCIG CL + E
Sbjct: 146 GEGCAPGSQRNSS---------LCALCIGSERA-------------PGRECLANNHE--- 180
Query: 121 LKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAF 180
+Y G TGAFRCLV+KG+VAF
Sbjct: 181 ------------------------------------RYYGY----TGAFRCLVEKGDVAF 200
Query: 181 LKHTTVQEMIEGRIDAY---GLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSA 237
+K VQ+ +G+ L + +FELLC +G R+PVDN ++C+ + P++AV+
Sbjct: 201 VKDQVVQQNTDGKNKDDWAKDLKQMDFELLCQNGAREPVDNAENCHLARAPNHAVVARDD 260
Query: 238 KSTQIRRYYQQFLIKTVQLFG 258
K T + + L+K FG
Sbjct: 261 KVTCV----AEELLKQQAQFG 277
>d2b6da1 c.94.1.2 (A:342-685) Lactoferrin {Cow (Bos taurus) [TaxId:
9913]}
Length = 344
Score = 112 bits (281), Expect = 9e-30
Identities = 72/262 (27%), Positives = 105/262 (40%), Gaps = 84/262 (32%)
Query: 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYF 60
+ K + LT + L+ KK+C V AGW IP+ +++ G + +F
Sbjct: 97 VVKKANEGLT-WNSLKDKKSCHTAVDRTAGWNIPMGLIVNQTGS---------CAFDEFF 146
Query: 61 GPSCAVNALINKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAF 120
SCA P D RLC LC G +G +C+ + E
Sbjct: 147 SQSCA---------PGADPKSRLCALCAGDD--------------QGLDKCVPNSKE--- 180
Query: 121 LKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVA 179
+Y G TGAFRCL + G+VA
Sbjct: 181 ------------------------------------KYYGY----TGAFRCLAEDVGDVA 200
Query: 180 FLKHTTVQEMIEGRIDAY---GLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTS 236
F+K+ TV E G A L +E+F LLC DGTR+PV QSC+ P++AV++ S
Sbjct: 201 FVKNDTVWENTNGESTADWAKNLKREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSRS 260
Query: 237 AKSTQIRRYYQQFLIKTVQLFG 258
++ + +Q L+ LFG
Sbjct: 261 DRAAHV----EQVLLHQQALFG 278
>d1eh3a_ c.94.1.2 (A:) Lactoferrin {Human (Homo sapiens) [TaxId:
9606]}
Length = 324
Score = 110 bits (277), Expect = 3e-29
Identities = 58/250 (23%), Positives = 88/250 (35%), Gaps = 75/250 (30%)
Query: 10 THISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNAL 69
++ L+G K+C G+ AGW +P+ L +V +F SC A
Sbjct: 101 FQLNELQGLKSCHTGLRRTAGWNVPIGTLRPFLDW-TGPPEPIEAAVARFFSASCVPGAD 159
Query: 70 INKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAFLKHTTVQEM 129
++ LC LC G G +C E
Sbjct: 160 KGQF-------PNLCRLCAG----------------TGENKCAFSSQE------------ 184
Query: 130 IEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVD-KGEVAFLKHTTVQE 188
Y +GAF+CL D G+VAF+K +TV E
Sbjct: 185 ---------------------------PYFSY----SGAFKCLRDGAGDVAFIKESTVFE 213
Query: 189 MIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSAKSTQIRRYYQQ 248
+ ++ +ELLC D TR+PVD ++ C+ +VPS+AV+ S
Sbjct: 214 D-----LSDEAERDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGK--EDAIWN 266
Query: 249 FLIKTVQLFG 258
L + + FG
Sbjct: 267 LLRQAQEKFG 276
>d2hava1 c.94.1.2 (A:340-664) Transferrin {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 325
Score = 110 bits (275), Expect = 5e-29
Identities = 71/261 (27%), Positives = 102/261 (39%), Gaps = 85/261 (32%)
Query: 1 MKKNSLPDLTHISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYF 60
+ K S DLT +L+GKK+C VG AGW IP+ +L +F
Sbjct: 92 VVKKSASDLT-WDNLKGKKSCHTAVGRTAGWNIPMGLLYNKINH---------CRFDEFF 141
Query: 61 GPSCAVNALINKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGEVAF 120
CA + LC+LC+G G C + E
Sbjct: 142 SEGCAPGS---------KKDSSLCKLCMG----------------SGLNLCEPNNKE--- 173
Query: 121 LKHTTVQEMIEGRIDACKYSFLGKELKMSFFYFLLLQYSGGLIEGTGAFRCLVDKGEVAF 180
Y G TGAFRCLV+KG+VAF
Sbjct: 174 ------------------------------------GYYGY----TGAFRCLVEKGDVAF 193
Query: 181 LKHTTVQEMIEGRIDAY---GLTKENFELLCTDGTRQPVDNYQSCNWGQVPSNAVMTTSA 237
+KH TV + G+ L ++++ELLC DGTR+PV+ Y +C+ + P++AV+T
Sbjct: 194 VKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLARAPNHAVVTRKD 253
Query: 238 KSTQIRRYYQQFLIKTVQLFG 258
K + + L + LFG
Sbjct: 254 KEACV----HKILRQQQHLFG 270
>d1ieja_ c.94.1.2 (A:) Ovotransferrin {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 329
Score = 103 bits (258), Expect = 2e-26
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 12 ISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVI--DCNNHVKSVINYFGPSCAVNAL 69
++ L+GK +C G+G AGW IP+ L+ G +E + + ++V +F SC
Sbjct: 103 VNDLQGKTSCHTGLGRSAGWNIPIGTLLHRGAIEWEGIESGSVEQAVAKFFSASCVPG-- 160
Query: 70 INKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQE 128
+LC C G P KC PY+G+ GAF CL D KG+VAF+KHTTV E
Sbjct: 161 -------ATIEQKLCRQCKGD-PKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTVNE 212
Query: 129 MIEGRID 135
+ D
Sbjct: 213 NAPDQKD 219
Score = 81.6 bits (201), Expect = 2e-18
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF CL D KG+VAF+KHTTV E + K+ +ELLC DG+RQPVDNY++CNW
Sbjct: 189 SGAFHCLKDGKGDVAFVKHTTVNENAPDQ-------KDEYELLCLDGSRQPVDNYKTCNW 241
Query: 225 GQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFG 258
+V ++AV+ ++ + FL K FG
Sbjct: 242 ARVAAHAVVA--RDDNKVEDIW-SFLSKAQSDFG 272
>d1ryoa_ c.94.1.2 (A:) Transferrin {Human (Homo sapiens) [TaxId:
9606]}
Length = 324
Score = 96.3 bits (239), Expect = 7e-24
Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 15/134 (11%)
Query: 10 THISHLRGKKACFAGVGTQAGWVIPVDVLIRNGGMEVIDCNNHVKSVINYFGPSCAVNAL 69
++ LRGKK+C G+G AGW IP+ +L + K+V N+F SCA
Sbjct: 104 FQMNQLRGKKSCHTGLGRSAGWNIPIGLLYCDL---PEPRKPLEKAVANFFSGSCA---- 156
Query: 70 INKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVD-KGEVAFLKHTTVQE 128
G + +LC+LC PG C+T + Y G+ GAF+CL D G+VAF+KH+T+ E
Sbjct: 157 ---PCADGTDFPQLCQLC----PGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFE 209
Query: 129 MIEGRIDACKYSFL 142
+ + D +Y L
Sbjct: 210 NLANKADRDQYELL 223
Score = 84.0 bits (207), Expect = 2e-19
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 166 TGAFRCLVD-KGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTDGTRQPVDNYQSCNW 224
+GAF+CL D G+VAF+KH+T+ E + ++ +ELLC D TR+PVD Y+ C+
Sbjct: 186 SGAFKCLKDGAGDVAFVKHSTIFENLAN-----KADRDQYELLCLDNTRKPVDEYKDCHL 240
Query: 225 GQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQLFG 258
QVPS+ V+ S + + L + + FG
Sbjct: 241 AQVPSHTVVARSMGGKEDL--IWELLNQAQEHFG 272
>d1yo5c1 a.4.5.21 (C:247-334) Sam pointed domain containing ets
transcription SPDEF {Human (Homo sapiens) [TaxId: 9606]}
Length = 88
Score = 27.9 bits (62), Expect = 0.38
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 224 WGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQ 255
WG + M S IR+YY++ +I+
Sbjct: 45 WGIRKNRPAMNYDKLSRSIRQYYKKGIIRKPD 76
>d1nd7a_ d.148.1.1 (A:) WW domain-containing protein 1, WWP1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 374
Score = 28.2 bits (62), Expect = 1.3
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 168 AFRCLVDKGEVAFLKHTTVQEMIEGRIDAYGLTKENFELLCTD 210
+F+ ++ + V E +D GL +E F LL +
Sbjct: 37 SFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHE 79
>d1wwxa1 a.4.5.21 (A:8-101) E74-like factor 5 ese-2b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 94
Score = 26.3 bits (58), Expect = 1.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 224 WGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQ 255
WGQ N MT S +R YY+ +++ V
Sbjct: 44 WGQRKKNDRMTYEKLSRALRYYYKTGILERVD 75
>d1duxc_ a.4.5.21 (C:) Elk-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 86
Score = 25.9 bits (57), Expect = 2.0
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 224 WGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQ 255
WG + M S +R YY + +I+ V
Sbjct: 42 WGLRKNKTNMNYDKLSRALRYYYDKNIIRKVS 73
>d1flia_ a.4.5.21 (A:) Fli-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 98
Score = 25.2 bits (55), Expect = 4.5
Identities = 12/50 (24%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Query: 224 WGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQ------LFGGPVPPQRTQ 267
WG+ S M S +R YY + ++ V F Q Q
Sbjct: 46 WGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQ 95
>d1zeda1 c.76.1.1 (A:1-479) Alkaline phosphatase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 479
Score = 25.9 bits (56), Expect = 5.9
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 261 VPPQRTQGKNVILFI 275
+ P +T KN+I+F+
Sbjct: 26 LQPAQTAAKNLIIFL 40
>d1dg9a_ c.44.1.1 (A:) Tyrosine phosphatase {Cow (Bos taurus)
[TaxId: 9913]}
Length = 157
Score = 25.2 bits (54), Expect = 6.2
Identities = 13/79 (16%), Positives = 21/79 (26%), Gaps = 14/79 (17%)
Query: 58 NYFGPSCAVNALINKYNPIGDNSDRLCELCIGRVPGEKCTTADPYAGFEGAFRCLVDKGE 117
+ +N+ + N EL P ++ DPY G + F
Sbjct: 87 YILCMDESNLRDLNRKSNQVKNCRAKIELLGSYDPQKQLIIEDPYYGNDADFE------- 139
Query: 118 VAFLKHTTVQEMIEGRIDA 136
TV + A
Sbjct: 140 -------TVYQQCVRCCRA 151
>d1awca_ a.4.5.21 (A:) GA binding protein (GABP) alpha {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 110
Score = 24.8 bits (54), Expect = 6.5
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 224 WGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQ 255
WGQ + M S +R YY +I VQ
Sbjct: 41 WGQRKNKPTMNYEKLSRALRYYYDGDMICKVQ 72
>d1gvja_ a.4.5.21 (A:) ETS-1 transcription factor, residues 331-440
{Human (Homo sapiens) [TaxId: 9606]}
Length = 142
Score = 24.8 bits (54), Expect = 7.4
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 224 WGQVPSNAVMTTSAKSTQIRRYYQQFLIKTVQ 255
WG+ + M S +R YY + +I
Sbjct: 80 WGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTA 111
>d1c4za_ d.148.1.1 (A:) Ubiquitin-protein ligase E3a (E6ap) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 350
Score = 25.5 bits (55), Expect = 7.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 191 EGRIDAYGLTKENFELLCTD 210
E +D G++KE F+L+ +
Sbjct: 43 EQGVDEGGVSKEFFQLVVEE 62
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.140 0.434
Gapped
Lambda K H
0.267 0.0637 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,050,945
Number of extensions: 48780
Number of successful extensions: 166
Number of sequences better than 10.0: 1
Number of HSP's gapped: 126
Number of HSP's successfully gapped: 31
Length of query: 276
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 192
Effective length of database: 1,254,276
Effective search space: 240820992
Effective search space used: 240820992
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.0 bits)