Query psy337
Match_columns 255
No_of_seqs 187 out of 424
Neff 4.2
Searched_HMMs 29240
Date Fri Aug 16 23:19:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy337.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/337hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gge_A PDZ domain-containing p 99.8 5.4E-19 1.8E-23 138.7 9.5 69 93-171 5-73 (95)
2 1r6j_A Syntenin 1; PDZ, membra 99.6 1E-15 3.5E-20 116.1 9.1 64 93-171 4-67 (82)
3 3o46_A Maguk P55 subfamily mem 99.6 2.2E-15 7.4E-20 112.8 10.6 90 92-237 3-93 (93)
4 1kwa_A Hcask/LIN-2 protein; PD 99.6 5.4E-15 1.9E-19 110.7 10.2 69 94-171 2-70 (88)
5 2ejy_A 55 kDa erythrocyte memb 99.6 1.5E-14 5.2E-19 111.9 9.9 69 94-171 13-81 (97)
6 2e7k_A Maguk P55 subfamily mem 99.5 1.2E-13 4E-18 104.0 10.1 69 92-171 5-73 (91)
7 1va8_A Maguk P55 subfamily mem 99.5 1.3E-12 4.4E-17 101.7 13.2 73 89-171 21-93 (113)
8 2yt7_A Amyloid beta A4 precurs 99.4 3.9E-12 1.3E-16 96.9 10.6 71 92-171 8-82 (101)
9 1v62_A KIAA1719 protein; struc 99.3 4.5E-12 1.5E-16 99.3 10.0 70 93-171 15-87 (117)
10 3e17_A Tight junction protein 99.3 5.8E-12 2E-16 94.2 9.9 55 113-171 12-66 (88)
11 2dc2_A GOPC, golgi associated 99.3 4E-12 1.4E-16 97.4 9.0 70 93-171 9-80 (103)
12 3b76_A E3 ubiquitin-protein li 99.3 9.8E-12 3.4E-16 98.5 10.1 70 93-171 24-98 (118)
13 1nf3_C PAR-6B; semi-CRIB motif 99.3 1.3E-11 4.5E-16 98.0 9.5 73 91-171 27-110 (128)
14 4e34_A Golgi-associated PDZ an 99.2 2.7E-11 9.3E-16 89.0 9.0 69 94-171 3-73 (87)
15 3cbz_A Dishevelled-2; PDZ doma 99.2 1.9E-11 6.6E-16 94.5 8.3 70 93-171 5-78 (108)
16 3l4f_D SH3 and multiple ankyri 99.2 4.2E-11 1.4E-15 96.3 10.5 69 93-171 27-109 (132)
17 3shw_A Tight junction protein 99.2 1.1E-11 3.7E-16 119.8 8.0 66 94-171 2-67 (468)
18 2d92_A INAD-like protein; PDZ 99.2 5.1E-11 1.7E-15 91.7 9.9 69 93-171 15-89 (108)
19 2iwo_A Multiple PDZ domain pro 99.2 2.5E-11 8.7E-16 95.9 8.1 70 93-171 24-98 (120)
20 2ego_A General receptor for ph 99.2 7.5E-11 2.6E-15 88.7 9.9 68 94-171 5-81 (96)
21 1n7e_A AMPA receptor interacti 99.2 1.5E-10 5E-15 87.0 11.5 69 93-171 5-75 (97)
22 2qg1_A Multiple PDZ domain pro 99.2 8.1E-11 2.8E-15 87.3 9.9 69 94-171 5-74 (92)
23 2byg_A Channel associated prot 99.2 6.4E-11 2.2E-15 93.0 9.8 71 91-171 22-99 (117)
24 3tsz_A Tight junction protein 99.2 5.5E-11 1.9E-15 111.7 10.9 67 93-171 9-75 (391)
25 1i16_A Interleukin 16, LCF; cy 99.2 2.2E-11 7.6E-16 97.1 7.0 69 93-171 29-102 (130)
26 1g9o_A NHE-RF; PDZ domain, com 99.2 1.2E-10 4.3E-15 86.1 10.4 67 94-171 4-71 (91)
27 1wfg_A Regulating synaptic mem 99.2 4.9E-11 1.7E-15 95.6 8.0 59 113-171 47-110 (131)
28 3hpk_A Protein interacting wit 99.2 1.7E-10 5.9E-15 90.7 10.5 69 94-171 20-90 (125)
29 2awx_A Synapse associated prot 99.2 1.6E-10 5.4E-15 88.2 9.9 69 93-171 3-78 (105)
30 2he4_A Na(+)/H(+) exchange reg 99.2 2.2E-10 7.7E-15 84.7 10.3 68 93-171 4-72 (90)
31 2fne_A Multiple PDZ domain pro 99.2 7.5E-11 2.5E-15 92.8 8.1 69 93-171 25-98 (117)
32 2db5_A INAD-like protein; PDZ 99.2 6E-11 2E-15 93.7 7.6 70 93-171 25-100 (128)
33 2dkr_A LIN-7 homolog B; LIN-7B 99.2 1.9E-10 6.6E-15 85.2 9.9 69 93-171 5-75 (93)
34 1ufx_A KIAA1526 protein; PDZ d 99.2 5.7E-11 1.9E-15 91.6 7.1 69 93-171 6-77 (103)
35 1uju_A Scribble; PDZ domain, c 99.2 1E-10 3.5E-15 90.0 8.5 70 93-171 9-89 (111)
36 2fe5_A Presynaptic protein SAP 99.2 2.2E-10 7.7E-15 85.0 10.0 69 93-171 3-78 (94)
37 2ehr_A INAD-like protein; PDZ 99.1 1.3E-10 4.3E-15 90.3 8.8 70 93-171 15-95 (117)
38 2opg_A Multiple PDZ domain pro 99.1 3E-10 1E-14 85.1 10.5 68 94-171 5-75 (98)
39 1qav_A Alpha-1 syntrophin (res 99.1 1.7E-10 5.9E-15 85.4 9.0 70 93-171 4-75 (90)
40 2dlu_A INAD-like protein; PDZ 99.1 1.5E-10 5.3E-15 88.9 9.0 69 93-171 15-83 (111)
41 3i4w_A Disks large homolog 4; 99.1 3E-10 1E-14 85.7 10.3 69 93-171 11-80 (104)
42 1d5g_A Human phosphatase HPTP1 99.1 3.3E-10 1.1E-14 84.5 10.4 69 93-171 5-78 (96)
43 1ihj_A INAD; intermolecular di 99.1 2E-10 7E-15 86.0 9.1 71 92-171 4-82 (98)
44 2jik_A Synaptojanin-2 binding 99.1 3.5E-10 1.2E-14 85.3 10.4 69 93-171 7-82 (101)
45 2xkx_A Disks large homolog 4; 99.1 1.6E-10 5.6E-15 115.2 11.1 69 94-172 308-377 (721)
46 2la8_A Inactivation-NO-after-p 99.1 1.8E-10 6.1E-15 89.4 8.9 66 96-171 5-70 (106)
47 3egg_C Spinophilin; PP1, serin 99.1 2E-10 7E-15 96.7 9.8 68 94-171 81-156 (170)
48 2vwr_A Ligand of NUMB protein 99.1 4E-10 1.4E-14 84.1 10.3 70 94-171 4-74 (95)
49 2qkv_A Inactivation-NO-after-p 99.1 4.2E-10 1.4E-14 84.9 10.5 68 94-171 9-76 (96)
50 1uhp_A Hypothetical protein KI 99.1 2.9E-10 9.8E-15 87.0 9.7 69 93-171 8-86 (107)
51 2i1n_A Discs, large homolog 3; 99.1 4E-10 1.4E-14 85.1 10.3 68 94-171 5-79 (102)
52 2q9v_A Membrane-associated gua 99.1 2.3E-10 7.8E-15 84.5 8.7 67 95-171 4-72 (90)
53 2z17_A Pleckstrin homology SEC 99.1 2.4E-10 8.3E-15 87.0 9.0 68 94-171 16-92 (104)
54 2f5y_A Regulator of G-protein 99.1 3.7E-10 1.3E-14 84.1 9.7 65 94-171 4-68 (91)
55 1uep_A Membrane associated gua 99.1 1.8E-10 6.3E-15 87.7 8.1 68 94-171 10-79 (103)
56 1wg6_A Hypothetical protein (r 99.1 1.2E-10 4E-15 92.7 7.1 68 95-171 27-100 (127)
57 2gzv_A PRKCA-binding protein; 99.1 5.3E-10 1.8E-14 87.6 10.8 71 92-171 23-95 (114)
58 1wi4_A Synip, syntaxin binding 99.1 1.6E-10 5.5E-15 89.7 7.7 68 93-171 15-86 (109)
59 3nfk_A Tyrosine-protein phosph 99.1 3.1E-10 1.1E-14 86.4 9.2 72 91-171 15-89 (107)
60 1wf8_A Neurabin-I; PDZ domain, 99.1 3.5E-10 1.2E-14 86.5 9.3 69 93-171 9-85 (107)
61 2r4h_A Membrane-associated gua 99.1 5.3E-10 1.8E-14 86.7 10.2 70 92-171 23-94 (112)
62 1q3o_A Shank1; PDZ, GKAP, pept 99.1 5.9E-10 2E-14 85.5 10.1 68 94-171 8-89 (109)
63 1ujd_A KIAA0559 protein; PDZ d 99.1 3.3E-10 1.1E-14 88.5 8.8 75 94-171 13-94 (117)
64 2i04_A Membrane-associated gua 99.1 8.9E-10 3E-14 80.5 10.2 65 97-171 4-70 (85)
65 3r68_A Na(+)/H(+) exchange reg 99.1 4.4E-10 1.5E-14 83.5 8.5 67 94-171 6-73 (95)
66 2jil_A GRIP1 protein, glutamat 99.1 7.1E-10 2.4E-14 82.9 9.5 67 95-171 5-77 (97)
67 2fcf_A Multiple PDZ domain pro 99.1 1.1E-09 3.6E-14 82.8 10.5 69 94-171 5-84 (103)
68 2o2t_A Multiple PDZ domain pro 99.1 2.1E-10 7.2E-15 88.8 6.8 70 93-171 20-95 (117)
69 1x6d_A Interleukin-16; PDZ dom 99.1 3.9E-10 1.3E-14 87.7 8.3 70 93-171 15-87 (119)
70 1uew_A Membrane associated gua 99.1 1E-09 3.6E-14 84.9 10.6 70 93-171 10-88 (114)
71 3qe1_A Sorting nexin-27, G pro 99.1 1.4E-09 4.8E-14 82.8 11.1 68 93-171 6-87 (107)
72 1wha_A KIAA0147 protein, scrib 99.1 5.9E-10 2E-14 85.0 8.9 68 94-171 8-83 (105)
73 2eno_A Synaptojanin-2-binding 99.1 7.9E-10 2.7E-14 86.3 9.8 69 93-171 17-92 (120)
74 3kzd_A TIAM-1, T-lymphoma inva 99.1 5.6E-10 1.9E-14 86.7 8.8 71 93-171 6-79 (94)
75 3ngh_A PDZ domain-containing p 99.1 5.7E-10 1.9E-14 84.8 8.6 68 94-171 2-70 (106)
76 1z87_A Alpha-1-syntrophin; pro 99.1 1.7E-10 5.7E-15 104.0 6.6 71 93-172 77-149 (263)
77 2cs5_A Tyrosine-protein phosph 99.1 2.8E-10 9.7E-15 88.5 7.0 73 90-171 12-87 (119)
78 2daz_A INAD-like protein; PDZ 99.1 6.7E-10 2.3E-14 87.3 9.2 69 93-171 25-96 (124)
79 2kpk_A Membrane-associated gua 99.0 1.5E-09 5.1E-14 86.2 11.1 68 94-171 19-88 (129)
80 1wi2_A Riken cDNA 2700099C19; 99.0 1E-09 3.5E-14 83.7 9.5 69 93-171 15-85 (104)
81 2vsp_A PDZ domain-containing p 99.0 2.6E-10 9E-15 84.7 5.7 67 94-171 4-71 (91)
82 1v6b_A Harmonin isoform A1; st 99.0 4.5E-10 1.5E-14 88.2 7.2 69 92-171 17-88 (118)
83 3axa_A Afadin, nectin-3, prote 99.0 1.5E-09 5.2E-14 82.6 10.0 58 114-171 21-83 (106)
84 3k1r_A Harmonin; protein-prote 99.0 8.5E-10 2.9E-14 92.9 9.1 69 93-171 84-154 (192)
85 4amh_A Disks large homolog 1; 99.0 1.4E-09 4.9E-14 83.6 9.6 59 113-171 12-77 (106)
86 2jxo_A Ezrin-radixin-moesin-bi 99.0 1E-09 3.6E-14 82.3 8.6 67 94-171 10-77 (98)
87 2g5m_B Neurabin-2; spinophilin 99.0 8.3E-10 2.8E-14 85.0 8.1 68 94-171 5-80 (113)
88 1um1_A KIAA1849 protein, RSGI 99.0 2.2E-09 7.4E-14 82.3 10.4 69 93-171 8-81 (110)
89 2iwq_A Multiple PDZ domain pro 99.0 2.4E-09 8.1E-14 85.0 10.9 69 94-171 25-104 (123)
90 1q7x_A PDZ2B domain of PTP-BAS 99.0 8.7E-10 3E-14 84.2 8.1 69 93-171 9-87 (108)
91 2dm8_A INAD-like protein; PDZ 99.0 5.9E-10 2E-14 86.0 7.2 68 94-171 18-88 (116)
92 2lob_A Golgi-associated PDZ an 98.6 3.4E-11 1.2E-15 94.4 0.0 70 93-171 27-98 (112)
93 1y7n_A Amyloid beta A4 precurs 99.0 1.5E-09 5.2E-14 82.0 9.0 53 113-171 23-75 (90)
94 2v90_A PDZ domain-containing p 99.0 1.6E-09 5.4E-14 81.0 9.0 67 94-171 4-74 (96)
95 2dmz_A INAD-like protein; PDZ 99.0 1.4E-09 4.7E-14 85.8 9.0 70 93-171 15-91 (129)
96 1ueq_A Membrane associated gua 99.0 1.4E-09 4.8E-14 85.6 8.9 68 94-171 20-89 (123)
97 1qau_A Neuronal nitric oxide s 99.0 1.5E-09 5.1E-14 83.2 8.8 68 95-171 3-71 (112)
98 2jre_A C60-1 PDZ domain peptid 99.0 2.2E-09 7.5E-14 81.8 9.6 69 94-171 13-89 (108)
99 1m5z_A GRIP, AMPA receptor int 99.0 4.3E-09 1.5E-13 77.7 10.8 68 94-171 7-76 (91)
100 2djt_A Unnamed protein product 99.0 2.3E-09 7.9E-14 81.2 9.4 69 93-171 11-83 (104)
101 2d90_A PDZ domain containing p 99.0 1.4E-09 4.9E-14 82.3 8.3 68 93-171 6-74 (102)
102 2eei_A PDZ domain-containing p 99.0 8.6E-10 2.9E-14 83.8 6.9 68 93-171 8-76 (106)
103 2koj_A Partitioning defective 99.0 1.9E-09 6.4E-14 82.6 8.7 68 94-171 12-84 (111)
104 2pa1_A PDZ and LIM domain prot 99.0 2.6E-09 9E-14 78.4 9.2 58 113-171 11-70 (87)
105 2dls_A PDZ-rhogef, RHO guanine 99.0 3.2E-09 1.1E-13 79.4 9.7 66 93-171 8-73 (93)
106 1tp5_A Presynaptic density pro 99.0 2.8E-09 9.5E-14 82.7 9.7 69 93-171 14-83 (119)
107 1b8q_A Protein (neuronal nitri 99.0 2.2E-09 7.5E-14 84.4 9.0 70 93-171 8-78 (127)
108 2iwn_A Multiple PDZ domain pro 99.0 4.4E-09 1.5E-13 77.8 9.9 58 114-171 15-78 (97)
109 2q3g_A PDZ and LIM domain prot 99.0 3.1E-09 1E-13 78.4 8.9 58 113-171 12-71 (89)
110 2csj_A TJP2 protein; PDZ domai 99.0 2.6E-09 8.9E-14 83.0 8.9 67 94-171 15-89 (117)
111 2kv8_A RGS12, regulator of G-p 98.9 6.4E-10 2.2E-14 81.1 4.8 65 94-171 3-67 (83)
112 2uzc_A Human pdlim5, PDZ and L 98.9 5.3E-09 1.8E-13 76.8 9.6 58 113-171 12-71 (88)
113 1v5q_A GRIP1 homolog, glutamat 98.9 2.1E-09 7.1E-14 84.5 7.8 70 93-171 15-90 (122)
114 2kjd_A Sodium/hydrogen exchang 98.9 5E-09 1.7E-13 82.1 9.4 68 93-171 9-77 (128)
115 1wfv_A Membrane associated gua 98.9 2.1E-09 7.2E-14 80.9 7.0 68 94-171 12-81 (103)
116 3r0h_A INAD, inactivation-NO-a 98.9 1E-08 3.5E-13 85.4 11.7 70 94-173 19-94 (206)
117 2eeh_A PDZ domain-containing p 98.9 4.4E-09 1.5E-13 79.5 8.6 69 93-171 10-80 (100)
118 1uit_A Human discs large 5 pro 98.9 8E-09 2.8E-13 80.0 10.2 68 93-171 19-86 (117)
119 2vsv_A Rhophilin-2; scaffold p 98.9 5.1E-09 1.7E-13 82.3 9.1 66 93-171 23-88 (109)
120 3r0h_A INAD, inactivation-NO-a 98.9 7.4E-09 2.5E-13 86.2 10.0 58 113-171 124-181 (206)
121 2kom_A Partitioning defective 98.9 1.2E-08 4.2E-13 80.3 10.1 68 94-171 31-103 (121)
122 3khf_A Microtubule-associated 98.9 8.2E-09 2.8E-13 77.5 8.6 58 113-171 12-78 (99)
123 3gsl_A Disks large homolog 4; 98.9 1.2E-08 4.1E-13 83.3 10.2 69 94-172 6-81 (196)
124 1um7_A Synapse-associated prot 98.9 2.4E-09 8.2E-14 81.8 5.4 69 93-171 15-84 (113)
125 2qt5_A Glutamate receptor-inte 98.9 1.1E-08 3.8E-13 85.4 9.9 70 94-172 8-79 (200)
126 2yuy_A RHO GTPase activating p 98.9 2.1E-09 7.2E-14 84.9 5.1 67 94-171 9-105 (126)
127 2rcz_A Tight junction protein 98.9 1.5E-08 5.2E-13 72.3 9.1 55 113-171 12-66 (81)
128 2w4f_A Protein LAP4; structura 98.8 2.4E-08 8.1E-13 74.4 10.4 65 96-171 6-78 (97)
129 2h2b_A Tight junction protein 98.8 2.4E-08 8.4E-13 75.8 10.1 67 94-171 8-82 (107)
130 2pkt_A PDZ and LIM domain prot 98.8 1.8E-08 6.1E-13 74.6 9.0 58 113-171 12-71 (91)
131 1rgw_A ZAsp protein; PDZ, cyph 98.8 1.4E-08 4.8E-13 73.9 8.1 58 113-171 10-69 (85)
132 1n7t_A 99-MER peptide of densi 98.8 1.9E-08 6.4E-13 76.2 8.9 56 114-171 21-86 (103)
133 3soe_A Membrane-associated gua 98.8 7.9E-09 2.7E-13 82.7 7.1 65 93-171 12-76 (113)
134 1vae_A Rhophilin 2, rhophilin, 98.8 6.2E-09 2.1E-13 81.5 6.2 65 94-171 16-80 (111)
135 1x5q_A LAP4 protein; PDZ domai 98.8 3.6E-08 1.2E-12 75.4 10.4 67 94-171 16-90 (110)
136 1mfg_A ERB-B2 interacting prot 98.8 3.2E-08 1.1E-12 73.7 9.6 56 114-171 13-78 (95)
137 3tsv_A Tight junction protein 98.8 1.7E-08 5.6E-13 80.2 8.4 58 113-171 38-95 (124)
138 3suz_A Amyloid beta A4 precurs 98.8 1.8E-09 6E-14 100.8 3.2 74 91-173 202-279 (388)
139 2edz_A PDZ domain-containing p 98.8 2.3E-08 7.8E-13 77.3 8.5 69 93-171 13-82 (114)
140 3bpu_A Membrane-associated gua 98.8 1.8E-08 6.1E-13 74.1 7.3 65 94-171 4-69 (88)
141 1wif_A RSGI RUH-020, riken cDN 98.8 4.9E-09 1.7E-13 84.8 4.6 67 94-171 28-94 (126)
142 1uez_A KIAA1526 protein; PDZ d 98.8 2.7E-08 9.3E-13 75.0 8.5 70 93-171 8-79 (101)
143 1x5n_A Harmonin; PDZ domain, u 98.8 1.9E-08 6.4E-13 77.5 7.6 68 94-171 16-85 (114)
144 2edp_A Fragment, shroom family 98.8 1.3E-08 4.5E-13 77.1 6.6 69 93-171 9-79 (100)
145 3gsl_A Disks large homolog 4; 98.8 3.7E-08 1.3E-12 80.4 9.8 67 95-171 102-175 (196)
146 1p1d_A PDZ45, glutamate recept 98.7 3.2E-08 1.1E-12 82.7 9.2 70 94-172 7-82 (196)
147 3cyy_A Tight junction protein 98.7 5.6E-08 1.9E-12 71.5 9.2 55 113-171 14-68 (92)
148 1vb7_A PDZ and LIM domain 2; P 98.7 1.6E-08 5.6E-13 75.5 6.1 58 113-171 15-74 (94)
149 2eaq_A LIM domain only protein 98.7 4.1E-08 1.4E-12 72.3 7.9 55 115-171 18-72 (90)
150 1whd_A RGS3, regulator of G-pr 98.7 2E-08 6.9E-13 76.1 6.4 65 94-171 16-80 (100)
151 3sfj_A TAX1-binding protein 3; 98.7 3.8E-08 1.3E-12 74.2 7.7 56 115-171 20-89 (104)
152 2eeg_A PDZ and LIM domain prot 98.7 4.1E-08 1.4E-12 73.3 7.3 57 114-171 18-76 (94)
153 2qbw_A PDZ-fibronectin fusion 98.7 5.9E-08 2E-12 80.3 9.0 56 114-171 2-67 (195)
154 2vz5_A TAX1-binding protein 3; 98.7 3.8E-08 1.3E-12 79.7 7.5 71 94-171 24-108 (139)
155 2d8i_A T-cell lymphoma invasio 98.7 2E-08 6.8E-13 79.4 5.5 69 93-171 15-88 (114)
156 1wf7_A Enigma homologue protei 98.7 5.4E-08 1.8E-12 73.8 7.1 58 113-171 14-73 (103)
157 2xkx_A Disks large homolog 4; 98.6 7.5E-08 2.6E-12 96.1 9.9 71 93-173 59-136 (721)
158 1w9e_A Syntenin 1; cell adhesi 98.6 1.4E-07 4.9E-12 76.9 9.7 68 93-171 4-71 (166)
159 2krg_A Na(+)/H(+) exchange reg 98.6 4E-08 1.4E-12 85.7 6.5 68 93-171 9-77 (216)
160 2edv_A FERM and PDZ domain-con 98.6 3E-08 1E-12 74.8 3.9 65 94-171 9-74 (96)
161 1v5l_A PDZ and LIM domain 3; a 98.6 4.3E-08 1.5E-12 74.5 4.4 58 113-171 14-73 (103)
162 1wh1_A KIAA1095 protein; PDZ d 98.6 2.1E-07 7.3E-12 73.1 8.3 69 93-171 19-91 (124)
163 2qt5_A Glutamate receptor-inte 98.5 3.4E-07 1.2E-11 76.3 9.5 59 113-171 116-180 (200)
164 1uf1_A KIAA1526 protein; PDZ d 98.5 3.5E-07 1.2E-11 71.9 8.7 67 95-171 22-90 (128)
165 1ujv_A Membrane associated gua 98.5 3.2E-07 1.1E-11 69.4 7.6 64 94-171 11-74 (96)
166 1p1d_A PDZ45, glutamate recept 98.4 9.1E-07 3.1E-11 73.8 8.6 59 113-171 118-180 (196)
167 2yub_A LIMK-2, LIM domain kina 98.2 1.5E-06 5E-11 68.8 6.1 69 93-171 15-90 (118)
168 3suz_A Amyloid beta A4 precurs 98.2 1.9E-07 6.5E-12 87.1 0.0 52 114-171 308-359 (388)
169 3qik_A Phosphatidylinositol 3, 98.2 4.3E-06 1.5E-10 66.1 7.3 56 114-171 28-83 (101)
170 1w9e_A Syntenin 1; cell adhesi 98.0 3.1E-05 1.1E-09 62.9 9.3 53 113-171 99-151 (166)
171 1y74_B MLIN-2/CASK, peripheral 97.8 3.4E-06 1.2E-10 58.2 0.8 31 32-63 19-49 (50)
172 2pzd_A Serine protease HTRA2; 97.8 7.6E-05 2.6E-09 57.0 7.3 43 126-171 35-77 (113)
173 1fc6_A Photosystem II D1 prote 97.7 9E-05 3.1E-09 68.5 7.6 57 114-171 85-143 (388)
174 3lra_A Disks large homolog 1, 97.6 5.3E-07 1.8E-11 81.6 -7.4 85 2-103 114-214 (254)
175 2kl1_A YLBL protein; structure 97.6 3.2E-05 1.1E-09 58.1 2.7 42 126-171 5-46 (94)
176 2kjp_A Uncharacterized protein 97.5 2.2E-05 7.5E-10 59.2 0.5 41 127-171 2-42 (91)
177 2l97_A HTRA, putative serine p 97.3 0.00031 1.1E-08 56.0 5.8 42 126-171 57-98 (134)
178 3i18_A LMO2051 protein; alpha- 97.3 0.00033 1.1E-08 52.9 5.6 43 125-171 6-48 (100)
179 2p3w_A Probable serine proteas 97.3 0.00038 1.3E-08 53.1 5.7 43 126-171 35-77 (112)
180 2zpm_A Regulator of sigma E pr 97.2 0.0002 7E-09 52.3 3.6 41 128-171 6-46 (91)
181 4fgm_A Aminopeptidase N family 97.1 0.0025 8.5E-08 62.9 11.1 53 114-171 485-537 (597)
182 2hga_A Conserved protein MTH13 97.1 0.00061 2.1E-08 54.3 5.4 43 125-171 24-66 (125)
183 2i6v_A General secretion pathw 97.0 0.0013 4.3E-08 48.3 5.8 41 128-171 21-61 (87)
184 3id1_A Regulator of sigma E pr 96.9 0.00099 3.4E-08 50.1 4.8 41 128-171 4-44 (95)
185 3k50_A Putative S41 protease; 96.9 0.0013 4.4E-08 62.2 6.5 55 113-171 73-131 (403)
186 1y8t_A Hypothetical protein RV 96.9 0.0012 4.1E-08 59.1 5.8 54 115-171 230-284 (324)
187 4a8c_A Periplasmic PH-dependen 96.9 0.0017 5.8E-08 61.1 7.0 43 126-171 363-405 (436)
188 1te0_A Protease DEGS; two doma 96.8 0.0029 9.9E-08 56.7 7.9 54 115-171 222-286 (318)
189 4a8c_A Periplasmic PH-dependen 96.7 0.0016 5.4E-08 61.4 5.7 54 115-171 241-305 (436)
190 3stj_A Protease DEGQ; serine p 96.7 0.0045 1.5E-07 56.7 8.2 54 115-171 241-305 (345)
191 3pv2_A DEGQ; trypsin fold, PDZ 96.6 0.0025 8.7E-08 60.5 6.4 54 115-171 259-324 (451)
192 3pv2_A DEGQ; trypsin fold, PDZ 96.6 0.0038 1.3E-07 59.2 7.1 42 127-171 387-428 (451)
193 3rle_A Golgi reassembly-stacki 96.6 0.002 7E-08 54.6 4.7 54 114-171 95-154 (209)
194 1k32_A Tricorn protease; prote 96.4 0.0031 1.1E-07 63.4 5.8 54 114-171 737-799 (1045)
195 3qo6_A Protease DO-like 1, chl 96.4 0.0062 2.1E-07 55.4 7.3 54 116-171 235-304 (348)
196 3rle_A Golgi reassembly-stacki 96.3 0.0025 8.7E-08 54.0 3.9 37 126-163 16-53 (209)
197 3uit_A INAD-like protein, magu 96.3 0.00066 2.3E-08 61.8 -0.2 58 2-65 120-193 (265)
198 2i4s_A General secretion pathw 96.2 0.0087 3E-07 45.3 5.7 40 129-171 40-79 (105)
199 1lcy_A HTRA2 serine protease; 96.1 0.0076 2.6E-07 54.3 6.0 43 126-171 256-298 (325)
200 1ky9_A Protease DO, DEGP, HTRA 95.5 0.0024 8.3E-08 60.5 0.0 53 116-171 372-425 (448)
201 3num_A Serine protease HTRA1; 95.0 0.0042 1.4E-07 55.9 0.0 43 126-171 254-296 (332)
202 4fln_A Protease DO-like 2, chl 94.6 0.047 1.6E-06 53.6 6.4 45 116-162 255-311 (539)
203 1ky9_A Protease DO, DEGP, HTRA 93.5 0.021 7.3E-07 54.0 1.4 43 126-171 286-328 (448)
204 4fln_A Protease DO-like 2, chl 89.8 0.36 1.2E-05 47.4 5.4 42 127-171 416-457 (539)
205 3dor_A Protein CT_858, CPAF; m 67.6 6.2 0.00021 39.4 5.3 47 115-171 85-131 (583)
206 1va8_A Maguk P55 subfamily mem 44.6 31 0.0011 25.6 4.7 25 200-229 22-46 (113)
207 1kwa_A Hcask/LIN-2 protein; PD 40.4 16 0.00056 26.1 2.4 21 203-228 1-21 (88)
208 3uit_A INAD-like protein, magu 20.3 18 0.00063 32.8 -0.5 16 1-16 177-192 (265)
No 1
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.78 E-value=5.4e-19 Score=138.71 Aligned_cols=69 Identities=29% Similarity=0.347 Sum_probs=65.0
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..|.|++.|+. ++||+||+.+.++.+||+||++||+|||+|.|++||+|++|||++|.+++|+|++++|
T Consensus 5 ~~k~V~l~K~~----------~~LG~tI~~~g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lL 73 (95)
T 3gge_A 5 IEKEVNVYKSE----------DSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKL 73 (95)
T ss_dssp EEEEEEEECCS----------SCCCEEEECSSSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred eEEEEEEEECC----------CCceEEEEcCCCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHH
Confidence 35889999986 9999999975577899999999999999999999999999999999999999999999
No 2
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.63 E-value=1e-15 Score=116.14 Aligned_cols=64 Identities=20% Similarity=0.186 Sum_probs=58.1
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..|.|.|+|++ .+++||+++.+ +|+++++||+|+|.| |.+||+|+||||++|.+++|++++++|
T Consensus 4 ~~r~v~l~k~~---------~g~~Gf~i~~g-----~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~ll 67 (82)
T 1r6j_A 4 DPRTITMHKDS---------TGHVGFIFKNG-----KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADIL 67 (82)
T ss_dssp CCEEEEEECCT---------TSCCCEEEETT-----EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHH
T ss_pred ceEEEEEEECC---------CCCeEEEEECC-----EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 35889999998 68899999842 379999999999999 569999999999999999999999999
No 3
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.63 E-value=2.2e-15 Score=112.83 Aligned_cols=90 Identities=39% Similarity=0.672 Sum_probs=75.8
Q ss_pred cccceeeeeecCCCccccccCCCcceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 92 IFSPISRFQMSYPGTFLHSRFPVNNGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 92 ~~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
+.+|.|.+.|+. ++||+++..++ +..++|++|+.||+|++.|.|+.||+|++|||+++.+.++++++++
T Consensus 3 ~~~r~v~l~k~~----------~~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~ 72 (93)
T 3o46_A 3 DSVKIIRLVKNR----------EPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQI 72 (93)
T ss_dssp -CCEEEEEEESS----------SCCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHH
T ss_pred ccEEEEEEEeCC----------CCccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 368999999986 79999999764 3579999999999999999999999999999999999999999999
Q ss_pred cCCCCCccccCCCCCCCCCCCCCCCcccCCcceeEEEeeeecCCchhhcccCeEEEEEcCCCCCCCC
Q psy337 171 LTPPPIHPYLNGSDDPDDLDTPNGDIDIDNVTRVRLVQFQKNTDEPMREARGSVTFKIVPSYRSAPP 237 (255)
Q Consensus 171 Ltppp~~~~~ng~~~p~~~~~p~~~~~~~~~~~vrlVq~~K~t~ePLG~~~g~vT~k~~p~~~~~~~ 237 (255)
| ....++++|++.|++.+.+|
T Consensus 73 l----------------------------------------------~~~~~~v~l~v~~~~~~~~~ 93 (93)
T 3o46_A 73 L----------------------------------------------AQSQGAITFKIIPGSKEETP 93 (93)
T ss_dssp H----------------------------------------------HHCCEEEEEEEECC------
T ss_pred H----------------------------------------------HhCCCeEEEEEEeCCCCCCc
Confidence 9 55567899999999877653
No 4
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.60 E-value=5.4e-15 Score=110.71 Aligned_cols=69 Identities=67% Similarity=0.982 Sum_probs=64.9
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+|+|+|.|++ +++||+++..++++.++|++|++||+|+++|.|++||+|++|||+++.++++++++++|
T Consensus 2 ~r~V~l~K~~---------~~~lG~~i~~~~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l 70 (88)
T 1kwa_A 2 SRLVQFQKNT---------DEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKML 70 (88)
T ss_dssp CEEEEEEECS---------SSCCCEEEECSCGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHH
T ss_pred eEEEEEEeCC---------CCceeEEEEeCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 6899999997 79999999975567899999999999999999999999999999999999999999999
No 5
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.56 E-value=1.5e-14 Score=111.86 Aligned_cols=69 Identities=54% Similarity=0.826 Sum_probs=64.8
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.|.|.|.|+. +++||++++.++++.++|++|+.||+|++.|+|++||+|++|||++|.+++.++++++|
T Consensus 13 ~~~v~l~K~~---------~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l 81 (97)
T 2ejy_A 13 VRLIQFEKVT---------EEPMGICLKLNEKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAM 81 (97)
T ss_dssp CEEEEEEECS---------SSCCSEEEEECTTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHH
T ss_pred cEEEEEEeCC---------CCCeeEEEEeCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5899999988 89999999976566899999999999999999999999999999999998999999999
No 6
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=1.2e-13 Score=104.03 Aligned_cols=69 Identities=39% Similarity=0.661 Sum_probs=63.5
Q ss_pred cccceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 92 IFSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 92 ~~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..+|+|.|.|.. +++||++++.. .+.++|++|++||+|++.|.|+.||+|++|||+++ +.++++++++|
T Consensus 5 ~~~r~v~l~k~~---------~~~lG~~i~~~-~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l 73 (91)
T 2e7k_A 5 SSGRMVGIRKTA---------GEHLGVTFRVE-GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELL 73 (91)
T ss_dssp CCSCBCCBCCCT---------TCCCCEEEEES-SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHH
T ss_pred CCcEEEEEEECC---------CCcEeEEEEec-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHH
Confidence 357999999977 78999999974 46799999999999999999999999999999999 99999999999
No 7
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.45 E-value=1.3e-12 Score=101.67 Aligned_cols=73 Identities=30% Similarity=0.479 Sum_probs=66.1
Q ss_pred ccCcccceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHH
Q psy337 89 LKKIFSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQ 168 (255)
Q Consensus 89 ~~~~~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~ 168 (255)
.....+|.|.+.|.. +++||+++... ...++|.+|..||+|++.|+|+.||+|++|||+.|.+.++++++
T Consensus 21 ~~~~~~~~v~l~k~~---------~~~lG~~i~~~-~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~ 90 (113)
T 1va8_A 21 YGGETVKIVRIEKAR---------DIPLGATVRNE-MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVF 90 (113)
T ss_dssp ETTEECEEEEEEECT---------TCCCCEEEEEC-SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCCCceEEEEEEeCC---------CCceeEEEEeC-CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 344568999999998 66999999875 45799999999999999999999999999999999999999999
Q ss_pred hhc
Q psy337 169 KIL 171 (255)
Q Consensus 169 ~iL 171 (255)
++|
T Consensus 91 ~~l 93 (113)
T 1va8_A 91 DLL 93 (113)
T ss_dssp HHH
T ss_pred HHH
Confidence 999
No 8
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.37 E-value=3.9e-12 Score=96.95 Aligned_cols=71 Identities=23% Similarity=0.348 Sum_probs=64.3
Q ss_pred cccceeeeeecCCCccccccCCCcceEEEEeCCCC----cEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHH
Q psy337 92 IFSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEG----KCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNAL 167 (255)
Q Consensus 92 ~~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g----~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel 167 (255)
...|.|.+.|.. +++||+++..+..+ .++|.+|+.||+|++.|.|++||+|++|||+++.+.+++++
T Consensus 8 ~~~~~v~l~k~~---------g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~ 78 (101)
T 2yt7_A 8 DNCREVHLEKRR---------GEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAAC 78 (101)
T ss_dssp CCCEEEEEECCT---------TCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHH
T ss_pred CceEEEEEEeCC---------CCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 357899999987 78999999864433 59999999999999999999999999999999999999999
Q ss_pred Hhhc
Q psy337 168 QKIL 171 (255)
Q Consensus 168 ~~iL 171 (255)
+++|
T Consensus 79 ~~~l 82 (101)
T 2yt7_A 79 QAAV 82 (101)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9999
No 9
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=4.5e-12 Score=99.32 Aligned_cols=70 Identities=23% Similarity=0.293 Sum_probs=63.5
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC---CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE---GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQK 169 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~---g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~ 169 (255)
..+.|.|.|.. +++||+++..+.. +.++|.+|.+||+|++.|.|++||+|++|||+++.+.+++++++
T Consensus 15 ~~~~v~l~k~~---------~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~ 85 (117)
T 1v62_A 15 GPLMVEIVKTP---------GSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATK 85 (117)
T ss_dssp SSEEEEEECCT---------TCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHH
T ss_pred CcEEEEEEcCC---------CCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 46889999987 7899999987532 34999999999999999999999999999999999999999999
Q ss_pred hc
Q psy337 170 IL 171 (255)
Q Consensus 170 iL 171 (255)
+|
T Consensus 86 ~l 87 (117)
T 1v62_A 86 LL 87 (117)
T ss_dssp HH
T ss_pred HH
Confidence 99
No 10
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.34 E-value=5.8e-12 Score=94.16 Aligned_cols=55 Identities=27% Similarity=0.447 Sum_probs=51.6
Q ss_pred CCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
++.+|+++.. +++|++|++||+|++.|.|+.||+|++|||+++.+.++++++++|
T Consensus 12 ~~~~G~~~~~----gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i 66 (88)
T 3e17_A 12 NEEYGLRLGS----QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLI 66 (88)
T ss_dssp BCCCCEEEEE----EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCCCEEEeC----CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5788998864 699999999999999999999999999999999999999999999
No 11
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.34 E-value=4e-12 Score=97.38 Aligned_cols=70 Identities=23% Similarity=0.255 Sum_probs=63.0
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
..+.|.+.|.. ++++|+++..+.+ .+++|++|.+||+|++.|.|++||+|++|||+++.+.++++++++
T Consensus 9 ~~~~v~l~~~~---------~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~ 79 (103)
T 2dc2_A 9 PIRKVLLLKED---------HEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTI 79 (103)
T ss_dssp CEEEEEEECCS---------SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHH
T ss_pred CcEEEEEEeCC---------CCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 35788899987 7899999987542 369999999999999998999999999999999999999999999
Q ss_pred c
Q psy337 171 L 171 (255)
Q Consensus 171 L 171 (255)
|
T Consensus 80 l 80 (103)
T 2dc2_A 80 L 80 (103)
T ss_dssp H
T ss_pred H
Confidence 9
No 12
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.31 E-value=9.8e-12 Score=98.53 Aligned_cols=70 Identities=19% Similarity=0.294 Sum_probs=63.7
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-----CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-----EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNAL 167 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-----~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel 167 (255)
..|.|.+.|.. ++++|+++..+. ..+++|++|..||+|++.|.|++||+|++|||+++.+++++++
T Consensus 24 ~~~~v~l~k~~---------~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~ 94 (118)
T 3b76_A 24 HEKVVNIQKDP---------GESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEA 94 (118)
T ss_dssp EEEEEEEECCT---------TCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHH
T ss_pred CcEEEEEEeCC---------CCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 45889999986 689999999764 2369999999999999999999999999999999999999999
Q ss_pred Hhhc
Q psy337 168 QKIL 171 (255)
Q Consensus 168 ~~iL 171 (255)
+++|
T Consensus 95 ~~~l 98 (118)
T 3b76_A 95 VALL 98 (118)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9999
No 13
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.28 E-value=1.3e-11 Score=98.03 Aligned_cols=73 Identities=21% Similarity=0.317 Sum_probs=63.3
Q ss_pred CcccceeeeeecCCCccccccCCCcceEEEEeCC-----------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeec
Q psy337 91 KIFSPISRFQMSYPGTFLHSRFPVNNGITLKMND-----------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPV 159 (255)
Q Consensus 91 ~~~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-----------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V 159 (255)
+...|.|.+.|... +++||+++..+. ..+++|++|.+||+|++.|+|++||+|++|||+++
T Consensus 27 ~~~~r~v~l~k~~~--------~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v 98 (128)
T 1nf3_C 27 PETHRRVRLCKYGT--------EKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEV 98 (128)
T ss_dssp CTTCEEEEECCSST--------TSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEES
T ss_pred CCccEEEEEEECCC--------CCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 44679999999741 378999997542 13699999999999999999999999999999999
Q ss_pred cCCCHHHHHhhc
Q psy337 160 GNQSVNALQKIL 171 (255)
Q Consensus 160 ~g~~~eel~~iL 171 (255)
.+.++++++++|
T Consensus 99 ~~~~~~~~~~~l 110 (128)
T 1nf3_C 99 SGKSLDQVTDMM 110 (128)
T ss_dssp TTCCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 999999999999
No 14
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.25 E-value=2.7e-11 Score=88.98 Aligned_cols=69 Identities=22% Similarity=0.255 Sum_probs=61.9
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+.|.+.|.. ++.+|+++..+. ..+++|++|.+||+|++++.|+.||+|++|||+++.+.++++++.++
T Consensus 3 ~~~v~l~~~~---------~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~ 73 (87)
T 4e34_A 3 IRKVLLLKED---------HEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTIL 73 (87)
T ss_dssp CEEEEEECCT---------TBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEEECC---------CCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5678889887 689999998653 23699999999999999999999999999999999999999999998
No 15
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.24 E-value=1.9e-11 Score=94.45 Aligned_cols=70 Identities=20% Similarity=0.298 Sum_probs=62.4
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC----CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND----EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQ 168 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e----~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~ 168 (255)
..+.|.|.|.. .++||+++..+. ..+++|.+|++||+|++.|.|++||+|++|||+++.++++++++
T Consensus 5 ~~~~v~l~k~~---------~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~ 75 (108)
T 3cbz_A 5 NIITVTLNMEK---------YNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAV 75 (108)
T ss_dssp CEEEEEECHHH---------HCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHH
T ss_pred eEEEEEEEeCC---------CCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 35778888865 588999998752 35799999999999999999999999999999999999999999
Q ss_pred hhc
Q psy337 169 KIL 171 (255)
Q Consensus 169 ~iL 171 (255)
++|
T Consensus 76 ~~l 78 (108)
T 3cbz_A 76 RVL 78 (108)
T ss_dssp HHH
T ss_pred HHH
Confidence 999
No 16
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.24 E-value=4.2e-11 Score=96.26 Aligned_cols=69 Identities=19% Similarity=0.228 Sum_probs=62.2
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCCC--------------cEEEEEeeccchhhhhcccCCCCeEEeECCee
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEG--------------KCIVARIMHGGMIHRQATLHVGDEIKEINGIP 158 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g--------------~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~ 158 (255)
..|.|.+.|.. .+++|++|+.+... +++|.+|..||+|++.| |+.||+|++|||++
T Consensus 27 ~~r~v~l~r~~---------~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~ 96 (132)
T 3l4f_D 27 KEKTVLLQKKD---------SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQN 96 (132)
T ss_dssp CCCEEEEECCT---------TSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSB
T ss_pred CCEEEEEEECC---------CCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEE
Confidence 35889999976 68999999987542 48999999999999999 99999999999999
Q ss_pred ccCCCHHHHHhhc
Q psy337 159 VGNQSVNALQKIL 171 (255)
Q Consensus 159 V~g~~~eel~~iL 171 (255)
|.+.++++++.+|
T Consensus 97 v~~~~~~~~~~~l 109 (132)
T 3l4f_D 97 VVKVGHRQVVNMI 109 (132)
T ss_dssp CTTSCHHHHHHHH
T ss_pred CCCCCHHHHHHHH
Confidence 9999999999999
No 17
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.24 E-value=1.1e-11 Score=119.81 Aligned_cols=66 Identities=18% Similarity=0.275 Sum_probs=60.8
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+|+|.+.|. ++||+++.++.+.+++|++|++||+|++.| |++||+|++|||++|.++++++++.+|
T Consensus 2 ~r~V~l~k~-----------~~lG~~i~gg~~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L 67 (468)
T 3shw_A 2 MKLVKFRKG-----------DSVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFL 67 (468)
T ss_dssp EEEEEEECC-----------SSCCEEEEEETTTEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred ceEEEEecC-----------CccceEEEccCcCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 578888885 689999988766789999999999999988 999999999999999999999999999
No 18
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.23 E-value=5.1e-11 Score=91.71 Aligned_cols=69 Identities=17% Similarity=0.242 Sum_probs=62.5
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNA 166 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~ee 166 (255)
.++.|.|.|.. ++||++|+.+. +..++|++|++||+|++.|.|++||+|++|||+++.+.++++
T Consensus 15 ~~~~v~l~k~~----------~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~ 84 (108)
T 2d92_A 15 EVKIVELVKDC----------KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAE 84 (108)
T ss_dssp SCEEEEEEECS----------SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHH
T ss_pred ceEEEEEEECC----------CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 46889999986 79999998632 246999999999999999999999999999999999999999
Q ss_pred HHhhc
Q psy337 167 LQKIL 171 (255)
Q Consensus 167 l~~iL 171 (255)
++++|
T Consensus 85 ~~~~l 89 (108)
T 2d92_A 85 AVEIL 89 (108)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99999
No 19
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.22 E-value=2.5e-11 Score=95.90 Aligned_cols=70 Identities=17% Similarity=0.159 Sum_probs=59.8
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC-----CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-----GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNAL 167 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-----g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel 167 (255)
..|.|.|.|.. ++++|++|..+.+ .+++|++|.+||+|++.|.|++||+|++|||+++.+.+++++
T Consensus 24 ~~~~v~l~k~~---------~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~ 94 (120)
T 2iwo_A 24 GLRTVEMKKGP---------TDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQA 94 (120)
T ss_dssp -CEEEEEEC-------------CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHH
T ss_pred CcEEEEEEcCC---------CCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHH
Confidence 46899999987 6799999987532 269999999999999999999999999999999999999999
Q ss_pred Hhhc
Q psy337 168 QKIL 171 (255)
Q Consensus 168 ~~iL 171 (255)
+.++
T Consensus 95 ~~~l 98 (120)
T 2iwo_A 95 VNLL 98 (120)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9999
No 20
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.21 E-value=7.5e-11 Score=88.66 Aligned_cols=68 Identities=19% Similarity=0.279 Sum_probs=60.2
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEe-------CC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKM-------ND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSV 164 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~-------~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~ 164 (255)
.|.|.+.|.. .+++|+++.. +. ...++|.+|.+||+|++.| |+.||+|++|||+++.+.++
T Consensus 5 ~r~v~l~k~~---------~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 74 (96)
T 2ego_A 5 RKVLTLEKGD---------NQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRH 74 (96)
T ss_dssp EEEEEEECCT---------TCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCH
T ss_pred cEEEEEEeCC---------CCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 5889999987 7899999985 22 2368999999999999988 99999999999999999999
Q ss_pred HHHHhhc
Q psy337 165 NALQKIL 171 (255)
Q Consensus 165 eel~~iL 171 (255)
+++.++|
T Consensus 75 ~~~~~~l 81 (96)
T 2ego_A 75 REIVDII 81 (96)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999999
No 21
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.21 E-value=1.5e-10 Score=87.01 Aligned_cols=69 Identities=22% Similarity=0.367 Sum_probs=60.7
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
..+.|.+.|.. .++|+++..+.+ +.++|..|..||+|++.|.|+.||+|++|||+.+.+.+++++.++
T Consensus 5 ~~~~v~l~~~~----------~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 74 (97)
T 1n7e_A 5 IIYTVELKRYG----------GPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHL 74 (97)
T ss_dssp CEEEEEEECTT----------SCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred eEEEEEEEeCC----------CCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 35667776654 789999987653 579999999999999999899999999999999999999999999
Q ss_pred c
Q psy337 171 L 171 (255)
Q Consensus 171 L 171 (255)
|
T Consensus 75 l 75 (97)
T 1n7e_A 75 L 75 (97)
T ss_dssp H
T ss_pred H
Confidence 8
No 22
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.21 E-value=8.1e-11 Score=87.26 Aligned_cols=69 Identities=23% Similarity=0.332 Sum_probs=61.7
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
...|.+.|.+ ++++|+++..+. ..+++|.+|.+||+|++.|.|+.||+|++|||+++.+.+++++..++
T Consensus 5 ~~~v~l~k~~---------~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 74 (92)
T 2qg1_A 5 TLTIGLQKKP---------GKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALL 74 (92)
T ss_dssp EEEEEEECCT---------TSCCSEEEECCSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEEeCC---------CCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4668888876 689999998754 34799999999999999999999999999999999999999999888
No 23
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=6.4e-11 Score=93.04 Aligned_cols=71 Identities=17% Similarity=0.264 Sum_probs=63.1
Q ss_pred CcccceeeeeecCCCccccccCCCcceEEEEeCC-------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCC
Q psy337 91 KIFSPISRFQMSYPGTFLHSRFPVNNGITLKMND-------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQS 163 (255)
Q Consensus 91 ~~~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~ 163 (255)
+...+.|.+.|.. +++|++|..+. +.+++|.+|..||+|++.|.|++||+|++|||++|.+.+
T Consensus 22 ~~~~~~v~l~k~~----------~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~ 91 (117)
T 2byg_A 22 SMTVVEIKLFKGP----------KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVT 91 (117)
T ss_dssp EEEEEEEEEECBT----------TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC
T ss_pred CCceEEEEEEeCC----------CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC
Confidence 3456888898876 79999999642 246999999999999999999999999999999999999
Q ss_pred HHHHHhhc
Q psy337 164 VNALQKIL 171 (255)
Q Consensus 164 ~eel~~iL 171 (255)
+++++++|
T Consensus 92 ~~~~~~~l 99 (117)
T 2byg_A 92 HEEAVAIL 99 (117)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999999
No 24
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.20 E-value=5.5e-11 Score=111.65 Aligned_cols=67 Identities=18% Similarity=0.257 Sum_probs=61.8
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+++|.+.|+. +||+++..+++++++|++|++||+|++.| |++||+|++|||+++.+.++++++.+|
T Consensus 9 ~~~~v~~~k~~-----------~lG~~i~gg~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l 75 (391)
T 3tsz_A 9 SMKLVKFRKGD-----------SVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFL 75 (391)
T ss_dssp CEEEEEEECCS-----------SCCEEEEEETTTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CcEEEEeecCC-----------ceeEEEEecCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 57889999874 59999998666789999999999999999 899999999999999999999999999
No 25
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.20 E-value=2.2e-11 Score=97.14 Aligned_cols=69 Identities=17% Similarity=0.229 Sum_probs=62.8
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC-----CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-----GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNAL 167 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-----g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel 167 (255)
..+.|.+.|.. .+||++|..+.+ .+++|.+|+.||+|++.|.|++||+|++|||+++.+.+++++
T Consensus 29 ~~~~v~l~k~~----------~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~ 98 (130)
T 1i16_A 29 TVCTVTLEKMS----------AGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEA 98 (130)
T ss_dssp EEEEEEEETTS----------SSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHH
T ss_pred cEEEEEEEcCC----------CccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 56889999976 799999997543 369999999999999999999999999999999999999999
Q ss_pred Hhhc
Q psy337 168 QKIL 171 (255)
Q Consensus 168 ~~iL 171 (255)
+++|
T Consensus 99 ~~~l 102 (130)
T 1i16_A 99 WNII 102 (130)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9999
No 26
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.20 E-value=1.2e-10 Score=86.07 Aligned_cols=67 Identities=15% Similarity=0.195 Sum_probs=61.0
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC-CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.|.|.+.|.. .++|+++..+.+ .+++|.+|.+||+|++.| |+.||+|++|||+++.+.+++++.+++
T Consensus 4 ~r~v~l~r~~----------~g~G~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 71 (91)
T 1g9o_A 4 PRLCCLEKGP----------NGYGFHLHGEKGKLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRI 71 (91)
T ss_dssp CEEEEEECBT----------TBCCEEEEECTTCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred cEEEEEEeCC----------CcccEEEEecCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4788999987 789999987653 579999999999999988 999999999999999999999999999
No 27
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.18 E-value=4.9e-11 Score=95.56 Aligned_cols=59 Identities=17% Similarity=0.265 Sum_probs=53.6
Q ss_pred CCcceEEEEeCCC-----CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDE-----GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~-----g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+++||+++..+.+ ..++|.+|.+||+|++.|.|++||+|++|||+++.+.++++++++|
T Consensus 47 ~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 110 (131)
T 1wfg_A 47 GAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNII 110 (131)
T ss_dssp CTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 7899999975331 2699999999999999999999999999999999999999999999
No 28
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.17 E-value=1.7e-10 Score=90.67 Aligned_cols=69 Identities=16% Similarity=0.212 Sum_probs=62.6
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.|.|.+.|.. ...+|+++..+.. .+++|++|..||+|++.|.|+.||+|++|||+++.+.++++++++|
T Consensus 20 ~~~v~l~k~~---------~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 90 (125)
T 3hpk_A 20 PGKVTLQKDA---------QNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMI 90 (125)
T ss_dssp EEEEEEECCT---------TSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CeEEEEEeCC---------CCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4778888987 6889999987653 3699999999999999999999999999999999999999999999
No 29
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.17 E-value=1.6e-10 Score=88.20 Aligned_cols=69 Identities=16% Similarity=0.267 Sum_probs=61.6
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC-------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
.++.|.|.|.. .++|++++.+.+ .+++|..|..||+|++.|.|+.||+|++|||+++.+.+++
T Consensus 3 ~~~~v~l~k~~----------~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~ 72 (105)
T 2awx_A 3 KIMEIKLIKGP----------KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHE 72 (105)
T ss_dssp CEEEEEEECBT----------TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHH
T ss_pred eEEEEEEEECC----------CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 46778999986 799999987532 3799999999999999999999999999999999999999
Q ss_pred HHHhhc
Q psy337 166 ALQKIL 171 (255)
Q Consensus 166 el~~iL 171 (255)
++..++
T Consensus 73 ~~~~~~ 78 (105)
T 2awx_A 73 EAVTAL 78 (105)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999888
No 30
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.16 E-value=2.2e-10 Score=84.73 Aligned_cols=68 Identities=15% Similarity=0.190 Sum_probs=61.6
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC-CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..|.|.+.|.. .++|+++..+.+ .+++|.+|.+||+|++.| |+.||+|++|||+++.+.+++++.++|
T Consensus 4 ~~r~v~l~k~~----------~g~G~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 72 (90)
T 2he4_A 4 RPRLCHLRKGP----------QGYGFNLHSDKSRPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASI 72 (90)
T ss_dssp CCEEEEEECBT----------TBCCEEEEECSSSSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CcEEEEEEECC----------CCccEEEEccCCCCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35889999987 789999987653 469999999999999988 999999999999999999999999999
No 31
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=7.5e-11 Score=92.84 Aligned_cols=69 Identities=16% Similarity=0.166 Sum_probs=62.1
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-----CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-----EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNAL 167 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-----~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel 167 (255)
..|.|.|.|.. +++|++++.+. +.+++|.+|..||+|++.|.|++||+|++|||+++.+.+++++
T Consensus 25 ~~~~v~L~k~~----------~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~ 94 (117)
T 2fne_A 25 QCKSITLERGP----------DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEA 94 (117)
T ss_dssp EEEEEEECCBT----------TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHH
T ss_pred ccEEEEEEeCC----------CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 35889999986 78999998642 2369999999999999999999999999999999999999999
Q ss_pred Hhhc
Q psy337 168 QKIL 171 (255)
Q Consensus 168 ~~iL 171 (255)
++++
T Consensus 95 ~~~l 98 (117)
T 2fne_A 95 VAIL 98 (117)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9999
No 32
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.16 E-value=6e-11 Score=93.67 Aligned_cols=70 Identities=19% Similarity=0.184 Sum_probs=62.4
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC-----CcEEEEEeeccchhhhhcccCCCCeEEeECCeecc-CCCHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-----GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVG-NQSVNA 166 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-----g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~-g~~~ee 166 (255)
..+.|.+.|.. .++||++|..+.+ .+++|.+|..||+|++.|.|++||+|++|||++|. ++++++
T Consensus 25 ~~~~v~l~k~~---------~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~ 95 (128)
T 2db5_A 25 QIEYIDIERPS---------TGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQ 95 (128)
T ss_dssp EEEEEEEECCS---------SSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHH
T ss_pred ceEEEEEEECC---------CCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHH
Confidence 46889999987 6799999975432 26999999999999999999999999999999997 999999
Q ss_pred HHhhc
Q psy337 167 LQKIL 171 (255)
Q Consensus 167 l~~iL 171 (255)
++.+|
T Consensus 96 ~~~~l 100 (128)
T 2db5_A 96 AIALL 100 (128)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99999
No 33
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=1.9e-10 Score=85.16 Aligned_cols=69 Identities=19% Similarity=0.368 Sum_probs=62.0
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
..|.|.|.|.. .++|+++..+. +..++|..|.+||+|++.|.|+.||+|++|||+.+.+.+++++.++
T Consensus 5 ~~r~v~l~k~~----------~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~ 74 (93)
T 2dkr_A 5 SSGVVELPKTD----------EGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVEL 74 (93)
T ss_dssp CSCEEEEECCT----------TCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHH
T ss_pred CCEEEEEEeCC----------CCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 35889999976 89999998643 3579999999999999998899999999999999999999999988
Q ss_pred c
Q psy337 171 L 171 (255)
Q Consensus 171 L 171 (255)
+
T Consensus 75 ~ 75 (93)
T 2dkr_A 75 L 75 (93)
T ss_dssp H
T ss_pred H
Confidence 8
No 34
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=5.7e-11 Score=91.61 Aligned_cols=69 Identities=23% Similarity=0.358 Sum_probs=61.0
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCCC--c-EEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEG--K-CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQK 169 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g--~-IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~ 169 (255)
..+.|.+.|.. .+||++|..+.+. . ++|++|++||+|++.|.|++||+|++|||+++.+++++++++
T Consensus 6 ~~~~v~l~k~~----------~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 75 (103)
T 1ufx_A 6 SGTLVRVKKSA----------ATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAAR 75 (103)
T ss_dssp SSEEEEEECCS----------SSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHH
T ss_pred ceEEEEEEcCC----------CcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 35778887764 8999999976542 3 499999999999999999999999999999999999999999
Q ss_pred hc
Q psy337 170 IL 171 (255)
Q Consensus 170 iL 171 (255)
+|
T Consensus 76 ~l 77 (103)
T 1ufx_A 76 II 77 (103)
T ss_dssp HH
T ss_pred HH
Confidence 99
No 35
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=1e-10 Score=90.01 Aligned_cols=70 Identities=16% Similarity=0.140 Sum_probs=62.8
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC-----------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccC
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-----------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGN 161 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-----------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g 161 (255)
..+.|.+.|.. ++.||++|..+.+ .+++|.+|..||+|++.|.|++||+|++|||+++.+
T Consensus 9 ~~~~v~l~k~~---------~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~ 79 (111)
T 1uju_A 9 GLRELCIQKAP---------GERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLG 79 (111)
T ss_dssp SSSCEEEECCT---------TCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTT
T ss_pred ccEEEEEEECC---------CCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 36788999987 7899999986531 358999999999999999999999999999999999
Q ss_pred CCHHHHHhhc
Q psy337 162 QSVNALQKIL 171 (255)
Q Consensus 162 ~~~eel~~iL 171 (255)
.++++++.++
T Consensus 80 ~~~~~~~~~l 89 (111)
T 1uju_A 80 LTHGEAVQLL 89 (111)
T ss_dssp SCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 9999999999
No 36
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.15 E-value=2.2e-10 Score=84.96 Aligned_cols=69 Identities=13% Similarity=0.215 Sum_probs=60.9
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
.++.|.|.|.. .++|++++.+. +.+++|..|.+||+|++.|.|+.||+|++|||+++.+.+++
T Consensus 3 ~~~~v~l~k~~----------~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~ 72 (94)
T 2fe5_A 3 TIMEVNLLKGP----------KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHE 72 (94)
T ss_dssp CEEEEEEECCT----------TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHH
T ss_pred EEEEEEEEECC----------CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 35778898886 78999998642 23699999999999999999999999999999999999999
Q ss_pred HHHhhc
Q psy337 166 ALQKIL 171 (255)
Q Consensus 166 el~~iL 171 (255)
++..++
T Consensus 73 ~~~~~~ 78 (94)
T 2fe5_A 73 EAVASL 78 (94)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999888
No 37
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.15 E-value=1.3e-10 Score=90.29 Aligned_cols=70 Identities=17% Similarity=0.254 Sum_probs=63.0
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC-----------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccC
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-----------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGN 161 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-----------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g 161 (255)
..+.|.|.|.. +++||++|..+.+ .+++|.+|.+||+|++.|.|++||+|++|||+++.+
T Consensus 15 ~~~~v~l~k~~---------~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~ 85 (117)
T 2ehr_A 15 PPRIVEIFREP---------NVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQN 85 (117)
T ss_dssp CCEEEEECCCS---------SSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTT
T ss_pred CCEEEEEEeCC---------CCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 36889999986 6899999976532 479999999999999999999999999999999999
Q ss_pred CCHHHHHhhc
Q psy337 162 QSVNALQKIL 171 (255)
Q Consensus 162 ~~~eel~~iL 171 (255)
.++++++.++
T Consensus 86 ~~~~~~~~~~ 95 (117)
T 2ehr_A 86 ASHSEAVEAI 95 (117)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 9999999988
No 38
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.15 E-value=3e-10 Score=85.06 Aligned_cols=68 Identities=19% Similarity=0.368 Sum_probs=61.1
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC---CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE---GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~---g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
.+.|.+.|.. .++|+++..+.+ ++++|..|.+||+|++.|.|+.||+|++|||+++.+.+++++..+
T Consensus 5 ~~~v~l~~~~----------~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 74 (98)
T 2opg_A 5 ETTIEISKGR----------TGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINV 74 (98)
T ss_dssp EEEEEEECBT----------TBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred EEEEEEEECC----------CcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3668888876 799999997653 579999999999999999999999999999999999999999988
Q ss_pred c
Q psy337 171 L 171 (255)
Q Consensus 171 L 171 (255)
+
T Consensus 75 ~ 75 (98)
T 2opg_A 75 L 75 (98)
T ss_dssp H
T ss_pred H
Confidence 8
No 39
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.15 E-value=1.7e-10 Score=85.35 Aligned_cols=70 Identities=19% Similarity=0.253 Sum_probs=62.4
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
..+.|.+.|.. +++||+++..+. ..+++|..|..||+|++.|.|++||+|++|||+++.+.++.++..+
T Consensus 4 ~~~~v~l~k~~---------~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~ 74 (90)
T 1qav_A 4 QRRRVTVRKAD---------AGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQA 74 (90)
T ss_dssp SCEEEEEECCT---------TTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHH
T ss_pred ccEEEEEEeCC---------CCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 35789999976 689999998753 2469999999999999998999999999999999999999999988
Q ss_pred c
Q psy337 171 L 171 (255)
Q Consensus 171 L 171 (255)
+
T Consensus 75 ~ 75 (90)
T 1qav_A 75 L 75 (90)
T ss_dssp H
T ss_pred H
Confidence 8
No 40
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.14 E-value=1.5e-10 Score=88.86 Aligned_cols=69 Identities=20% Similarity=0.313 Sum_probs=62.5
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..+.|.+.|.. +++|+++..+.+.+++|..|..||+|++.|.|+.||+|++|||+.+.+.+++++.++|
T Consensus 15 ~~~~v~l~~~~----------~~lG~~l~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 83 (111)
T 2dlu_A 15 HVEEVELINDG----------SGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVL 83 (111)
T ss_dssp EEEEEEEECCS----------SCCCEEEECCSSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHH
T ss_pred ceEEEEEEeCC----------CccCEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35788888875 8899999976556799999999999999998999999999999999999999999988
No 41
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.14 E-value=3e-10 Score=85.74 Aligned_cols=69 Identities=20% Similarity=0.268 Sum_probs=61.9
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCCC-cEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEG-KCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g-~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..+.|.+.|.. .++|+++..+.++ +++|..|..||+|++.|.|+.||+|++|||+++.+.++.++..++
T Consensus 11 ~~~~v~l~k~~----------~glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (104)
T 3i4w_A 11 EPRRIVIHRGS----------TGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIAL 80 (104)
T ss_dssp SCEEEEEECBT----------TBTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred ccEEEEEEeCC----------CccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 36788999986 7999999986643 799999999999999999999999999999999999999999888
No 42
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.14 E-value=3.3e-10 Score=84.54 Aligned_cols=69 Identities=16% Similarity=0.221 Sum_probs=61.0
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-----CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-----EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNAL 167 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-----~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel 167 (255)
..+.|.+.|.. ++||+++..+. +.+++|.+|.+||+|++.|.|+.||+|++|||+++.+.+++++
T Consensus 5 ~~~~v~l~k~~----------~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~ 74 (96)
T 1d5g_A 5 DIFEVELAKND----------NSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQA 74 (96)
T ss_dssp CEEEEEEECSS----------SSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHH
T ss_pred CEEEEEEEeCC----------CCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 35668888875 89999998643 2479999999999999999999999999999999999999999
Q ss_pred Hhhc
Q psy337 168 QKIL 171 (255)
Q Consensus 168 ~~iL 171 (255)
..++
T Consensus 75 ~~~l 78 (96)
T 1d5g_A 75 VETL 78 (96)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9888
No 43
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.14 E-value=2e-10 Score=85.99 Aligned_cols=71 Identities=20% Similarity=0.251 Sum_probs=62.4
Q ss_pred cccceeeeeecCCCccccccCCCcceEEEEeCCC--------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCC
Q psy337 92 IFSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQS 163 (255)
Q Consensus 92 ~~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~ 163 (255)
+.++.|.+.|.. ..+||+++..+.+ ..++|.+|.+||+|++.|.|++||+|++|||+++.+.+
T Consensus 4 e~~~~v~l~k~~---------~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~ 74 (98)
T 1ihj_A 4 ELIHMVTLDKTG---------KKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNST 74 (98)
T ss_dssp CEEEEEEEECTT---------SSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCC
T ss_pred ceEEEEEEEeCC---------CCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC
Confidence 356889999966 6899999976431 26999999999999999989999999999999999999
Q ss_pred HHHHHhhc
Q psy337 164 VNALQKIL 171 (255)
Q Consensus 164 ~eel~~iL 171 (255)
++++..+|
T Consensus 75 ~~~~~~~l 82 (98)
T 1ihj_A 75 EQAVIDLI 82 (98)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999988
No 44
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.14 E-value=3.5e-10 Score=85.33 Aligned_cols=69 Identities=17% Similarity=0.196 Sum_probs=61.9
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC-------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
..+.|.+.|.. .++|+++..+.+ .+++|..|..||+|++.|.|+.||+|++|||+.+.+.+++
T Consensus 7 ~~~~v~l~~~~----------~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~ 76 (101)
T 2jik_A 7 TEEEINLTRGP----------SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQ 76 (101)
T ss_dssp EEEEEEEECCT----------TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHH
T ss_pred ccEEEEEEeCC----------CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 46888999976 899999997532 4799999999999999999999999999999999999999
Q ss_pred HHHhhc
Q psy337 166 ALQKIL 171 (255)
Q Consensus 166 el~~iL 171 (255)
++..++
T Consensus 77 ~~~~~~ 82 (101)
T 2jik_A 77 DAVDLF 82 (101)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999888
No 45
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.13 E-value=1.6e-10 Score=115.25 Aligned_cols=69 Identities=19% Similarity=0.246 Sum_probs=61.9
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhcC
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKILT 172 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iLt 172 (255)
.+.|.|.|.. .+||++++.++ ..+++|++|.+||+|++.|.|++||+|++|||++|.++++++++++|.
T Consensus 308 ~~~v~l~~~~----------~~lG~~i~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~ 377 (721)
T 2xkx_A 308 PRRIVIHRGS----------TGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALK 377 (721)
T ss_pred eEEEEEEECC----------CCccEEEeccCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHH
Confidence 5778888875 78999998654 357999999999999999999999999999999999999999999993
No 46
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.13 E-value=1.8e-10 Score=89.37 Aligned_cols=66 Identities=20% Similarity=0.280 Sum_probs=58.7
Q ss_pred eeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 96 ISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 96 iV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.|.|.|+. ++.||+++... ..+++|++|++||+|++.|.|+.||+|++|||+++.+.+++++..++
T Consensus 5 ~v~L~k~~---------~~glG~~i~~~-~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~ 70 (106)
T 2la8_A 5 NVDLMKKA---------GKELGLSLSPN-EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALF 70 (106)
T ss_dssp EEEECCBS---------SSTTCCEEEEC-SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHH
T ss_pred EEEEEeCC---------CCccCEEEEeC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46777666 68899999874 35699999999999999999999999999999999999999999888
No 47
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.13 E-value=2e-10 Score=96.68 Aligned_cols=68 Identities=18% Similarity=0.244 Sum_probs=60.3
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEe---CC-----CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKM---ND-----EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~---~e-----~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
...|.+.|+. .+||++|.. +. ..+++|.+|++||+|++.|.|++||+|++|||++|.+.+++
T Consensus 81 ~~~v~l~k~~----------~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~ 150 (170)
T 3egg_C 81 LFPVELEKDS----------EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQS 150 (170)
T ss_dssp EEEEEEECBT----------TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHH
T ss_pred EEEEEEEeCC----------CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 3567788876 789999987 21 24699999999999999999999999999999999999999
Q ss_pred HHHhhc
Q psy337 166 ALQKIL 171 (255)
Q Consensus 166 el~~iL 171 (255)
+++++|
T Consensus 151 ~~~~~l 156 (170)
T 3egg_C 151 FAASVL 156 (170)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999999
No 48
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.13 E-value=4e-10 Score=84.12 Aligned_cols=70 Identities=17% Similarity=0.237 Sum_probs=60.5
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
...|.|.|..+ ++++|+++.... ..+++|.+|.+||+|++.|.|++||+|++|||+++.+.++.++..++
T Consensus 4 ~~~v~l~k~~~--------~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 74 (95)
T 2vwr_A 4 ILQVALHKRDS--------GEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQII 74 (95)
T ss_dssp EEEEEEECSST--------TCCCCEEEEECSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEEECCC--------CCcccEEEEeccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45688888531 578999998654 34799999999999999999999999999999999999999998888
No 49
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.13 E-value=4.2e-10 Score=84.86 Aligned_cols=68 Identities=18% Similarity=0.247 Sum_probs=59.8
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
...+.+.|.. ..+||+++...+ .+++|++|++||+|++.|.|+.||+|++|||+++.+.+++++..++
T Consensus 9 ~~~v~l~~~~---------~~glG~~~~~~~-~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~ 76 (96)
T 2qkv_A 9 KFNVDLMKKA---------GKELGLSLSPNE-IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALF 76 (96)
T ss_dssp CEEEEEECBT---------TBCCCEEEEECS-SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred eEEEEEEeCC---------CCCccEEEEeCC-CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4567787766 588999998743 4699999999999999999999999999999999999999998888
No 50
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=2.9e-10 Score=87.01 Aligned_cols=69 Identities=16% Similarity=0.203 Sum_probs=61.4
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC----------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCC
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND----------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQ 162 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e----------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~ 162 (255)
..+.|.+.|.. .++|++|+.+. ...++|.+|.+||+|++.|.|++||+|++|||+++.+.
T Consensus 8 ~~~~v~l~k~~----------~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~ 77 (107)
T 1uhp_A 8 KSLTLVLHRDS----------GSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRA 77 (107)
T ss_dssp EEEEEEECCSS----------SCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTC
T ss_pred EEEEEEEEeCC----------CccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCC
Confidence 35778888875 89999998643 34799999999999999988999999999999999999
Q ss_pred CHHHHHhhc
Q psy337 163 SVNALQKIL 171 (255)
Q Consensus 163 ~~eel~~iL 171 (255)
++++++.++
T Consensus 78 ~~~~~~~~~ 86 (107)
T 1uhp_A 78 THDQAVEAF 86 (107)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999999988
No 51
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.12 E-value=4e-10 Score=85.15 Aligned_cols=68 Identities=15% Similarity=0.176 Sum_probs=60.8
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC-------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND-------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNA 166 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~ee 166 (255)
.+.|.+.|.. .+||+++..+. +.+++|.+|.+||+|++.|.|+.||+|++|||+++.+.++++
T Consensus 5 ~~~v~l~k~~----------~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~ 74 (102)
T 2i1n_A 5 YEEIVLERGN----------SGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSR 74 (102)
T ss_dssp EEEEEEECBT----------TBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH
T ss_pred EEEEEEEECC----------CcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 5778888875 78999999743 247999999999999999999999999999999999999999
Q ss_pred HHhhc
Q psy337 167 LQKIL 171 (255)
Q Consensus 167 l~~iL 171 (255)
+..++
T Consensus 75 ~~~~~ 79 (102)
T 2i1n_A 75 AVEAL 79 (102)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99888
No 52
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.12 E-value=2.3e-10 Score=84.48 Aligned_cols=67 Identities=16% Similarity=0.218 Sum_probs=60.0
Q ss_pred ceeeeeecCCCccccccCCCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 95 PISRFQMSYPGTFLHSRFPVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 95 RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+.|.+.|.. .++|+++..+. ..+++|..|..||+|++.|.|+.||+|++|||+++.+.+++++.++|
T Consensus 4 ~~v~l~~~~----------~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l 72 (90)
T 2q9v_A 4 QDIFLWRKE----------TGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLM 72 (90)
T ss_dssp EEEEEECBT----------TBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred EEEEEEECC----------CccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 567888876 78999998753 24699999999999999999999999999999999999999999988
No 53
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.12 E-value=2.4e-10 Score=87.00 Aligned_cols=68 Identities=15% Similarity=0.262 Sum_probs=60.1
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeC---------CCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMN---------DEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSV 164 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~---------e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~ 164 (255)
.+.+.+.|.. ++++|+++... ....++|.+|.+||+|++.| |++||+|++|||+++.+.++
T Consensus 16 ~~~v~l~~~~---------~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~ 85 (104)
T 2z17_A 16 RKLVTVEKQD---------NETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTY 85 (104)
T ss_dssp CCEEEEECCT---------TSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCH
T ss_pred ceEEEEEeCC---------CCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCH
Confidence 4677788876 67899999862 13479999999999999988 99999999999999999999
Q ss_pred HHHHhhc
Q psy337 165 NALQKIL 171 (255)
Q Consensus 165 eel~~iL 171 (255)
++++++|
T Consensus 86 ~~~~~~l 92 (104)
T 2z17_A 86 KQVVDLI 92 (104)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999999
No 54
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=3.7e-10 Score=84.05 Aligned_cols=65 Identities=18% Similarity=0.171 Sum_probs=58.7
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.|.|.+.|.. ..+|+++..+ .+++|..+..||+|++.| |+.||+|++|||+++.+.+++++.+++
T Consensus 4 ~r~v~l~~~~----------~g~G~~l~~~--~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l 68 (91)
T 2f5y_A 4 YRQITIPRGK----------DGFGFTICCD--SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEI 68 (91)
T ss_dssp EEEEEEECBT----------TBTSEEEECS--SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred eEEEEEEeCC----------CCccEEEecC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5788899886 7899999863 469999999999999988 999999999999999999999999988
No 55
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=1.8e-10 Score=87.72 Aligned_cols=68 Identities=19% Similarity=0.326 Sum_probs=60.8
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+.|.+.|.. .++|+++..+. ...++|.+|..||+|++.|.|++||+|++|||++|.+.+++++.++|
T Consensus 10 ~~~v~l~~~~----------~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 79 (103)
T 1uep_A 10 ELDVHLRRME----------SGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLM 79 (103)
T ss_dssp EECCEEESSS----------SSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred EEEEEEEeCC----------CccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5678888865 78999998743 35799999999999999999999999999999999999999999999
No 56
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.11 E-value=1.2e-10 Score=92.74 Aligned_cols=68 Identities=22% Similarity=0.295 Sum_probs=58.9
Q ss_pred ceeeeeecCCCccccccCCCcceEEEEeCCC------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHH
Q psy337 95 PISRFQMSYPGTFLHSRFPVNNGITLKMNDE------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQ 168 (255)
Q Consensus 95 RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~ 168 (255)
..|.+.|.. ..+||++|..+.+ ..++|.+|++||+|++.|.|++||+|++|||+++.+.++++++
T Consensus 27 ~~v~l~k~~---------~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~ 97 (127)
T 1wg6_A 27 LEIPLNDSG---------SAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAM 97 (127)
T ss_dssp EEEECSSST---------TTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHH
T ss_pred EEEEEeeCC---------CCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 345566555 5899999986532 3699999999999999999999999999999999999999999
Q ss_pred hhc
Q psy337 169 KIL 171 (255)
Q Consensus 169 ~iL 171 (255)
++|
T Consensus 98 ~~l 100 (127)
T 1wg6_A 98 ETL 100 (127)
T ss_dssp HHH
T ss_pred HHH
Confidence 999
No 57
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.11 E-value=5.3e-10 Score=87.57 Aligned_cols=71 Identities=15% Similarity=0.219 Sum_probs=63.5
Q ss_pred cccceeeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHh
Q psy337 92 IFSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQK 169 (255)
Q Consensus 92 ~~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~ 169 (255)
...|.|.+.|.. ...+|+++..+.. ..++|++|..||+|++.|.|+.||+|++|||+++.+.+.+++.+
T Consensus 23 ~~~~~V~l~~~~---------~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~ 93 (114)
T 2gzv_A 23 MVPGKVTLQKDA---------QNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAK 93 (114)
T ss_dssp CCCEEEEEECCT---------TSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCEEEEEEECC---------CCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 356889999987 5679999987653 26999999999999999989999999999999999999999999
Q ss_pred hc
Q psy337 170 IL 171 (255)
Q Consensus 170 iL 171 (255)
+|
T Consensus 94 ~l 95 (114)
T 2gzv_A 94 MI 95 (114)
T ss_dssp HH
T ss_pred HH
Confidence 98
No 58
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.11 E-value=1.6e-10 Score=89.71 Aligned_cols=68 Identities=15% Similarity=0.184 Sum_probs=60.8
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC----CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE----GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQ 168 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~----g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~ 168 (255)
..|.|.+.|. .+||++|..+.+ ..++|.+|+.||+|++.|.|++||+|++|||+++.++++++++
T Consensus 15 ~~~~v~l~k~-----------~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~ 83 (109)
T 1wi4_A 15 AFRVITVTKE-----------TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAK 83 (109)
T ss_dssp TEEEEEECCS-----------SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHH
T ss_pred cEEEEEEeCC-----------CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4688888884 589999996432 2599999999999999999999999999999999999999999
Q ss_pred hhc
Q psy337 169 KIL 171 (255)
Q Consensus 169 ~iL 171 (255)
++|
T Consensus 84 ~~l 86 (109)
T 1wi4_A 84 SII 86 (109)
T ss_dssp HHH
T ss_pred HHH
Confidence 999
No 59
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.11 E-value=3.1e-10 Score=86.41 Aligned_cols=72 Identities=18% Similarity=0.192 Sum_probs=63.4
Q ss_pred CcccceeeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhhcc-cCCCCeEEeECCeeccCCCHHHH
Q psy337 91 KIFSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQAT-LHVGDEIKEINGIPVGNQSVNAL 167 (255)
Q Consensus 91 ~~~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGl-LhvGDeIlEVNGi~V~g~~~eel 167 (255)
...++.+.+.|.. ..++|+++..+.+ .+++|.+|..||+|++.|. |+.||+|++|||++|.+.+++++
T Consensus 15 ~~~~~~v~l~~~~---------~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~ 85 (107)
T 3nfk_A 15 HDNLVLIRMKPDE---------NGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQV 85 (107)
T ss_dssp -CCCEEEEECCCT---------TSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHH
T ss_pred CCCEEEEEEEcCC---------CCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHH
Confidence 3457899999987 6899999987542 3699999999999999995 99999999999999999999999
Q ss_pred Hhhc
Q psy337 168 QKIL 171 (255)
Q Consensus 168 ~~iL 171 (255)
..++
T Consensus 86 ~~~i 89 (107)
T 3nfk_A 86 VLFI 89 (107)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9988
No 60
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=3.5e-10 Score=86.50 Aligned_cols=69 Identities=20% Similarity=0.268 Sum_probs=60.9
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEe---C-----CCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKM---N-----DEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSV 164 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~---~-----e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~ 164 (255)
..+.|.+.|.. .+||+++.. + ...+++|.+|.+||+|++.|.|++||+|++|||+++.+.++
T Consensus 9 ~~~~v~l~k~~----------~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 78 (107)
T 1wf8_A 9 ELFPVELEKDE----------DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQ 78 (107)
T ss_dssp EEEEEEEECBT----------TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCH
T ss_pred eEEEEEEEECC----------CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 35778888876 799999987 1 23479999999999999999999999999999999999999
Q ss_pred HHHHhhc
Q psy337 165 NALQKIL 171 (255)
Q Consensus 165 eel~~iL 171 (255)
.+++.++
T Consensus 79 ~~~~~~~ 85 (107)
T 1wf8_A 79 NFAATVL 85 (107)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999888
No 61
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.10 E-value=5.3e-10 Score=86.67 Aligned_cols=70 Identities=21% Similarity=0.269 Sum_probs=62.4
Q ss_pred cccceeeeeecCCCccccccCCCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHh
Q psy337 92 IFSPISRFQMSYPGTFLHSRFPVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQK 169 (255)
Q Consensus 92 ~~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~ 169 (255)
...+.|.+.|.. .++|++++.+. ..+++|..|..||+|++.|.|+.||+|++|||++|.+.+++++..
T Consensus 23 ~~~~~v~l~~~~----------~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 92 (112)
T 2r4h_A 23 MDFYTVELERGA----------KGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIE 92 (112)
T ss_dssp CCEEEEEEECBT----------TBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CceEEEEEEcCC----------CccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 356889998876 78999998764 347999999999999999989999999999999999999999998
Q ss_pred hc
Q psy337 170 IL 171 (255)
Q Consensus 170 iL 171 (255)
++
T Consensus 93 ~l 94 (112)
T 2r4h_A 93 LI 94 (112)
T ss_dssp HH
T ss_pred HH
Confidence 88
No 62
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.09 E-value=5.9e-10 Score=85.50 Aligned_cols=68 Identities=19% Similarity=0.248 Sum_probs=60.3
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCCC--------------cEEEEEeeccchhhhhcccCCCCeEEeECCeec
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDEG--------------KCIVARIMHGGMIHRQATLHVGDEIKEINGIPV 159 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g--------------~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V 159 (255)
.+.|.+.|.. ..++|++++.+... +++|..|..||+|++.| |+.||+|++|||+++
T Consensus 8 ~~~v~l~~~~---------~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v 77 (109)
T 1q3o_A 8 EKTVLLQKKD---------SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNV 77 (109)
T ss_dssp EEEEEEECCT---------TSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEEC
T ss_pred cEEEEEEECC---------CCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 4778888766 68999999876431 58999999999999988 999999999999999
Q ss_pred cCCCHHHHHhhc
Q psy337 160 GNQSVNALQKIL 171 (255)
Q Consensus 160 ~g~~~eel~~iL 171 (255)
.+.+++++.+++
T Consensus 78 ~~~~~~~~~~~l 89 (109)
T 1q3o_A 78 VKVGHRQVVNMI 89 (109)
T ss_dssp TTCCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 999999999988
No 63
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=3.3e-10 Score=88.49 Aligned_cols=75 Identities=23% Similarity=0.296 Sum_probs=59.6
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCCC-------cEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDEG-------KCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNA 166 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g-------~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~ee 166 (255)
.+.|.+.|.. .-+...+.+||++|..+.+. +++|++|++||+|++.|.|++||+|++|||+++.+.++++
T Consensus 13 ~~~v~l~r~~---~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~ 89 (117)
T 1ujd_A 13 HARIKITRDS---KDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEE 89 (117)
T ss_dssp EEEEEECCCS---SSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHH
T ss_pred eEEEEEEecC---cccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH
Confidence 4556666643 00011146899999865421 5899999999999999999999999999999999999999
Q ss_pred HHhhc
Q psy337 167 LQKIL 171 (255)
Q Consensus 167 l~~iL 171 (255)
++.+|
T Consensus 90 ~~~~l 94 (117)
T 1ujd_A 90 VQSII 94 (117)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99999
No 64
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.08 E-value=8.9e-10 Score=80.49 Aligned_cols=65 Identities=20% Similarity=0.229 Sum_probs=57.4
Q ss_pred eeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 97 SRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 97 V~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
|.+.|.. .++|+++..+.+ ..++|..|..||+|++.|.|+.||+|++|||+++.+.+++++.++|
T Consensus 4 v~l~k~~----------~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 70 (85)
T 2i04_A 4 TKLRKSS----------RGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIF 70 (85)
T ss_dssp EEEECBT----------TBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEECC----------CCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5666765 789999987442 3599999999999999998999999999999999999999999998
No 65
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.08 E-value=4.4e-10 Score=83.53 Aligned_cols=67 Identities=16% Similarity=0.222 Sum_probs=59.7
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC-CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.|.+.+.|.. .++|+++..+.. ..++|..|..||+|++.| |+.||+|++|||+++.+.+++++.++|
T Consensus 6 ~r~v~l~~~~----------~~~G~~l~~~~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 73 (95)
T 3r68_A 6 PRVVVIKKGS----------NGYGFYLRAGPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMI 73 (95)
T ss_dssp CEEEEEECBT----------TBCSCEEEEC--CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred cEEEEEecCC----------CcccEEEEecCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4778888876 799999987553 379999999999999998 999999999999999999999999999
No 66
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.07 E-value=7.1e-10 Score=82.86 Aligned_cols=67 Identities=16% Similarity=0.273 Sum_probs=59.0
Q ss_pred ceeeeeecCCCccccccCCCcceEEEEeCC------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHH
Q psy337 95 PISRFQMSYPGTFLHSRFPVNNGITLKMND------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQ 168 (255)
Q Consensus 95 RiV~l~K~~~~~~~~s~~~epLGiTIk~~e------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~ 168 (255)
..|.+.|.. .++|+++..+. ..+++|.+|.+||+|++.|.|+.||+|++|||+++.+.+++++.
T Consensus 5 ~~v~l~k~~----------~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~ 74 (97)
T 2jil_A 5 VEVTLHKEG----------NTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAM 74 (97)
T ss_dssp EEEEEECBT----------TBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHH
T ss_pred EEEEEEeCC----------CccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 446677754 79999998753 24799999999999999998999999999999999999999999
Q ss_pred hhc
Q psy337 169 KIL 171 (255)
Q Consensus 169 ~iL 171 (255)
++|
T Consensus 75 ~~l 77 (97)
T 2jil_A 75 SIL 77 (97)
T ss_dssp HHH
T ss_pred HHH
Confidence 999
No 67
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=1.1e-09 Score=82.76 Aligned_cols=69 Identities=14% Similarity=0.218 Sum_probs=57.5
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC-----------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCC
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-----------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQ 162 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-----------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~ 162 (255)
.+.|.+.|.. ...||+++..... .+++|.+|..||+|++.|.|++||+|++|||+++.+.
T Consensus 5 p~~v~l~~~~---------~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~ 75 (103)
T 2fcf_A 5 PRRVELWREP---------SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDA 75 (103)
T ss_dssp CEEEEECCCC----------CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTC
T ss_pred CEEEEEEeCC---------CCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCC
Confidence 3567777765 4679999875321 3699999999999999998999999999999999999
Q ss_pred CHHHHHhhc
Q psy337 163 SVNALQKIL 171 (255)
Q Consensus 163 ~~eel~~iL 171 (255)
+++++.++|
T Consensus 76 ~~~~~~~~l 84 (103)
T 2fcf_A 76 SHEQAVEAI 84 (103)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999999999
No 68
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.07 E-value=2.1e-10 Score=88.84 Aligned_cols=70 Identities=21% Similarity=0.217 Sum_probs=62.5
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-----CCcEEEEEeeccchhhhhcccCCCCeEEeECCeecc-CCCHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-----EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVG-NQSVNA 166 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-----~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~-g~~~ee 166 (255)
..+.|.+.|.. +++||+++..+. ..+++|.+|..||+|++.|.|+.||+|++|||+++. +.++++
T Consensus 20 ~~~~v~l~k~~---------~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~ 90 (117)
T 2o2t_A 20 HVEVFELLKPP---------SGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQ 90 (117)
T ss_dssp CEEEEEEECCS---------SSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHH
T ss_pred eEEEEEEEECC---------CCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHH
Confidence 46889999986 689999998642 246999999999999999999999999999999998 999999
Q ss_pred HHhhc
Q psy337 167 LQKIL 171 (255)
Q Consensus 167 l~~iL 171 (255)
++.++
T Consensus 91 ~~~~l 95 (117)
T 2o2t_A 91 AISIL 95 (117)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99998
No 69
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.07 E-value=3.9e-10 Score=87.74 Aligned_cols=70 Identities=19% Similarity=0.276 Sum_probs=63.2
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC---CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE---GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQK 169 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~---g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~ 169 (255)
..+++.+.|.. ..++|+++..+.+ .+++|.+|..||+|++.|.|++||+|++|||+.|.+.++++++.
T Consensus 15 ~~~~v~l~~~~---------~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~ 85 (119)
T 1x6d_A 15 GIHVTILHKEE---------GAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALA 85 (119)
T ss_dssp TEEEEEEECCT---------TSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHH
T ss_pred CeEEEEEEeCC---------CCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 47888899976 6899999987542 36999999999999999999999999999999999999999999
Q ss_pred hc
Q psy337 170 IL 171 (255)
Q Consensus 170 iL 171 (255)
++
T Consensus 86 ~l 87 (119)
T 1x6d_A 86 IL 87 (119)
T ss_dssp HH
T ss_pred HH
Confidence 88
No 70
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.06 E-value=1e-09 Score=84.91 Aligned_cols=70 Identities=23% Similarity=0.281 Sum_probs=61.1
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC----CC-----cEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCC
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND----EG-----KCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQS 163 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e----~g-----~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~ 163 (255)
..+.|.+.|+. .++||++|.... .+ +++|.+|..||+|++++.|++||+|++|||+.+.+.+
T Consensus 10 ~~~~v~l~~~~---------~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~ 80 (114)
T 1uew_A 10 QTSDVVIHRKE---------NEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMP 80 (114)
T ss_dssp CCEEEEEECCT---------TSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSC
T ss_pred cceEEEEEECC---------CCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCC
Confidence 35778899876 689999997532 12 4699999999999998899999999999999999999
Q ss_pred HHHHHhhc
Q psy337 164 VNALQKIL 171 (255)
Q Consensus 164 ~eel~~iL 171 (255)
++++.++|
T Consensus 81 ~~~~~~~l 88 (114)
T 1uew_A 81 HADIVKLI 88 (114)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999999
No 71
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.06 E-value=1.4e-09 Score=82.75 Aligned_cols=68 Identities=22% Similarity=0.368 Sum_probs=59.3
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC--C------------cEEEEEeeccchhhhhcccCCCCeEEeECCee
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--G------------KCIVARIMHGGMIHRQATLHVGDEIKEINGIP 158 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g------------~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~ 158 (255)
..|.|.+.|.. .++|++++.+.+ + .++|..|..||+|++.| |+.||+|++|||++
T Consensus 6 ~~r~v~l~k~~----------~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~ 74 (107)
T 3qe1_A 6 SPRVVRIVKSE----------SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVN 74 (107)
T ss_dssp CCEEEEEECBT----------TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEE
T ss_pred CcEEEEEEECC----------CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEE
Confidence 35889999987 689999987531 1 13699999999999998 99999999999999
Q ss_pred ccCCCHHHHHhhc
Q psy337 159 VGNQSVNALQKIL 171 (255)
Q Consensus 159 V~g~~~eel~~iL 171 (255)
+.+.+++++.++|
T Consensus 75 v~~~~~~~~~~~l 87 (107)
T 3qe1_A 75 VEGATHKQVVDLI 87 (107)
T ss_dssp CTTCCHHHHHHHH
T ss_pred CCCCCHHHHHHHH
Confidence 9999999999999
No 72
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.06 E-value=5.9e-10 Score=84.96 Aligned_cols=68 Identities=28% Similarity=0.422 Sum_probs=60.0
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC--------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
...|.+.|.. .++|+++..+.+ ..++|.+|..||+|++.|.|+.||+|++|||+++.+.+++
T Consensus 8 ~~~v~l~~~~----------~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~ 77 (105)
T 1wha_A 8 RHVACLARSE----------RGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHD 77 (105)
T ss_dssp EEEEEECCCT----------TCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHH
T ss_pred eEEEEEEeCC----------CccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 3567777775 789999996432 4799999999999999999999999999999999999999
Q ss_pred HHHhhc
Q psy337 166 ALQKIL 171 (255)
Q Consensus 166 el~~iL 171 (255)
+++.+|
T Consensus 78 ~~~~~l 83 (105)
T 1wha_A 78 HAVSLL 83 (105)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999999
No 73
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=7.9e-10 Score=86.30 Aligned_cols=69 Identities=17% Similarity=0.196 Sum_probs=62.1
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
..+.|.|.|.. ..||+++..+. ...++|.+|..||+|++.|.|++||+|++|||++|.+.+++
T Consensus 17 ~~~~v~l~r~~----------~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~ 86 (120)
T 2eno_A 17 TEEEINLTRGP----------SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQ 86 (120)
T ss_dssp EEEEEEEECCS----------SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHH
T ss_pred ceEEEEEEECC----------CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 46889999986 89999999743 24799999999999999999999999999999999999999
Q ss_pred HHHhhc
Q psy337 166 ALQKIL 171 (255)
Q Consensus 166 el~~iL 171 (255)
+++.++
T Consensus 87 ~~~~~~ 92 (120)
T 2eno_A 87 DAVDLF 92 (120)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999888
No 74
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.06 E-value=5.6e-10 Score=86.72 Aligned_cols=71 Identities=21% Similarity=0.305 Sum_probs=57.8
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-C--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-E--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQK 169 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~ 169 (255)
..|.++|.|... -.+.+|+++.... + .+++|+.+.+||+|++.| |+.||+|++|||++|.+.+++++++
T Consensus 6 ~~~~v~i~k~~~-------~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~ 77 (94)
T 3kzd_A 6 VTHSIHIEKSDT-------AADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKD 77 (94)
T ss_dssp EEEEEEEEC-------------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHH
T ss_pred ceeEEEEEeCCC-------CcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 358899999760 0137999998633 2 369999999999999977 9999999999999999999999999
Q ss_pred hc
Q psy337 170 IL 171 (255)
Q Consensus 170 iL 171 (255)
++
T Consensus 78 ~l 79 (94)
T 3kzd_A 78 FL 79 (94)
T ss_dssp HH
T ss_pred HH
Confidence 99
No 75
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.06 E-value=5.7e-10 Score=84.84 Aligned_cols=68 Identities=19% Similarity=0.317 Sum_probs=60.7
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC-CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.|.|.+.|.+ ++.+|+.+....+ .+++|..|..||+|++.| |+.||+|++|||+++.+.+++++.++|
T Consensus 2 ~r~v~l~~~~---------~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 70 (106)
T 3ngh_A 2 PRESKLSKQE---------GQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELV 70 (106)
T ss_dssp CEEEEEECCT---------TCCCCCEEECCTTCCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CEEEEEEeCC---------CCeeCEEEEEEeCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3678888887 7899999987553 469999999999999988 899999999999999999999999999
No 76
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.06 E-value=1.7e-10 Score=104.04 Aligned_cols=71 Identities=20% Similarity=0.261 Sum_probs=64.4
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
..|.|.|.|.. +++|||+|+.+.+ .+++|++|+.||+|+++|.|++||+|++|||++|.+.++++++.+
T Consensus 77 ~~r~V~L~k~~---------~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~ 147 (263)
T 1z87_A 77 QRRRVTVRKAD---------AGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQA 147 (263)
T ss_dssp SSEEECCCTTT---------TCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHH
T ss_pred ccEEEEEEeCC---------CCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHH
Confidence 35899999986 6899999997642 479999999999999999999999999999999999999999999
Q ss_pred cC
Q psy337 171 LT 172 (255)
Q Consensus 171 Lt 172 (255)
|.
T Consensus 148 l~ 149 (263)
T 1z87_A 148 LK 149 (263)
T ss_dssp HH
T ss_pred Hh
Confidence 93
No 77
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=2.8e-10 Score=88.55 Aligned_cols=73 Identities=18% Similarity=0.186 Sum_probs=64.2
Q ss_pred cCcccceeeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhh-cccCCCCeEEeECCeeccCCCHHH
Q psy337 90 KKIFSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQ-ATLHVGDEIKEINGIPVGNQSVNA 166 (255)
Q Consensus 90 ~~~~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRs-GlLhvGDeIlEVNGi~V~g~~~ee 166 (255)
.+...+.|.+.|.. ..++|+++..+.+ .+++|.+|.+||+|++. |.|+.||+|++|||++|.+.++++
T Consensus 12 ~~~~~~~v~l~k~~---------~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~ 82 (119)
T 2cs5_A 12 PHDNLVLIRMKPDE---------NGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQ 82 (119)
T ss_dssp CSSCCEEEEECCCS---------SSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHH
T ss_pred CCCCeEEEEEEeCC---------CCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHH
Confidence 34457889999987 6789999987542 26999999999999998 799999999999999999999999
Q ss_pred HHhhc
Q psy337 167 LQKIL 171 (255)
Q Consensus 167 l~~iL 171 (255)
+++++
T Consensus 83 ~~~~~ 87 (119)
T 2cs5_A 83 VVLFI 87 (119)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99998
No 78
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.05 E-value=6.7e-10 Score=87.33 Aligned_cols=69 Identities=22% Similarity=0.227 Sum_probs=61.9
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC---CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE---GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQK 169 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~---g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~ 169 (255)
..+.|.+.|.. .+||+++..+.+ ..++|..|..||+|++.|.|++||+|++|||++|.+.++.++..
T Consensus 25 ~~~~v~l~k~~----------~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~ 94 (124)
T 2daz_A 25 ELHIIELEKDK----------NGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASA 94 (124)
T ss_dssp EEEEEEEECCS----------SCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHH
T ss_pred ceEEEEEEeCC----------CccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 45789999986 799999987542 47999999999999999999999999999999999999999988
Q ss_pred hc
Q psy337 170 IL 171 (255)
Q Consensus 170 iL 171 (255)
++
T Consensus 95 ~~ 96 (124)
T 2daz_A 95 II 96 (124)
T ss_dssp HH
T ss_pred HH
Confidence 88
No 79
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.05 E-value=1.5e-09 Score=86.22 Aligned_cols=68 Identities=19% Similarity=0.182 Sum_probs=60.2
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
...|.+.|.. .++|+++..+.+ ..++|.+|..||+|++.|.|+.||+|++|||++|.+.++++++++|
T Consensus 19 ~~~v~l~~~~----------~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 88 (129)
T 2kpk_A 19 FIHTKLRKSS----------RGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIF 88 (129)
T ss_dssp EEEEEEEECS----------SCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred EEEEEEEECC----------CcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4567888875 789999987432 3599999999999999999999999999999999999999999999
No 80
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.04 E-value=1e-09 Score=83.68 Aligned_cols=69 Identities=14% Similarity=0.271 Sum_probs=62.1
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
..|.|.+.|.. +..+|+++..+.. ..++|.+|..|++|++.| |+.||+|++|||+.+.+.+++++.++
T Consensus 15 ~~~~v~l~k~~---------~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~ 84 (104)
T 1wi2_A 15 LPRIVTLKKPP---------GAQLGFNIRGGKASQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEI 84 (104)
T ss_dssp CCEEEEECCCT---------TCCCSEEEECCSSSCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred CCEEEEEEeCC---------CCCccEEEEcccCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 35889999987 6899999997542 469999999999999987 99999999999999999999999999
Q ss_pred c
Q psy337 171 L 171 (255)
Q Consensus 171 L 171 (255)
|
T Consensus 85 l 85 (104)
T 1wi2_A 85 L 85 (104)
T ss_dssp H
T ss_pred H
Confidence 9
No 81
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.03 E-value=2.6e-10 Score=84.68 Aligned_cols=67 Identities=18% Similarity=0.246 Sum_probs=59.2
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.|.|.+.|.. .++|+++.... ...++|..|..||+|++.| |+.||+|++|||+++.+.+++++.++|
T Consensus 4 pr~v~l~k~~----------~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 71 (91)
T 2vsp_A 4 PKLCRLAKGE----------NGYGFHLNAIRGLPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRI 71 (91)
T ss_dssp EEEEEEECBT----------TBTSCCCBCCTTCSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred cEEEEEEeCC----------CcccEEEEeccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4789999987 58999997643 3478999999999999988 999999999999999999999999999
No 82
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.03 E-value=4.5e-10 Score=88.17 Aligned_cols=69 Identities=25% Similarity=0.318 Sum_probs=60.5
Q ss_pred cccceeeeeecCCCccccccCCCcceEEEEeCC---CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHH
Q psy337 92 IFSPISRFQMSYPGTFLHSRFPVNNGITLKMND---EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQ 168 (255)
Q Consensus 92 ~~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e---~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~ 168 (255)
..+|.+.+.|. .++|++|..+. .+.++|++|++||+|++.|.|++||+|++|||+++.+.++++++
T Consensus 17 ~~~~~~~~~~~-----------~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~ 85 (118)
T 1v6b_A 17 KDVRLLRIKKE-----------GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAE 85 (118)
T ss_dssp CCEEEEEEESC-----------SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHH
T ss_pred ceEEEEEECCC-----------CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 35677877775 47999998654 24699999999999999999999999999999999999999999
Q ss_pred hhc
Q psy337 169 KIL 171 (255)
Q Consensus 169 ~iL 171 (255)
++|
T Consensus 86 ~~l 88 (118)
T 1v6b_A 86 AAL 88 (118)
T ss_dssp HHH
T ss_pred HHH
Confidence 998
No 83
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.03 E-value=1.5e-09 Score=82.63 Aligned_cols=58 Identities=17% Similarity=0.322 Sum_probs=52.7
Q ss_pred CcceEEEEeC-----CCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 114 VNNGITLKMN-----DEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 114 epLGiTIk~~-----e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.++|+++..+ ...+++|..|..||+|++.|.|++||+|++|||+++.+.+++++..++
T Consensus 21 ~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~ 83 (106)
T 3axa_A 21 NGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELM 83 (106)
T ss_dssp SSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 7899999752 234799999999999999999999999999999999999999999888
No 84
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.02 E-value=8.5e-10 Score=92.91 Aligned_cols=69 Identities=20% Similarity=0.336 Sum_probs=62.3
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
..+.|.+.|.. ++++|+++..+. ..+++|++|.+||+|++.| |++||+|++|||++|.+.++++++.+
T Consensus 84 ~~~~v~l~k~~---------~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~ 153 (192)
T 3k1r_A 84 KLKEVRLDRLH---------PEGLGLSVRGGLEFGCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINL 153 (192)
T ss_dssp SCEEEEEETTS---------TTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHH
T ss_pred ceEEEEEEeCC---------CCceeEEEEcccccCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 46889999986 689999998653 2479999999999999999 99999999999999999999999999
Q ss_pred c
Q psy337 171 L 171 (255)
Q Consensus 171 L 171 (255)
|
T Consensus 154 l 154 (192)
T 3k1r_A 154 I 154 (192)
T ss_dssp H
T ss_pred H
Confidence 9
No 85
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.02 E-value=1.4e-09 Score=83.63 Aligned_cols=59 Identities=19% Similarity=0.389 Sum_probs=53.7
Q ss_pred CCcceEEEEeCCC-------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDE-------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~-------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..++|++|..+.+ .+++|.+|++||+|++.|.|+.||+|++|||++|.+.+++++..++
T Consensus 12 ~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 77 (106)
T 4amh_A 12 SKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTAL 77 (106)
T ss_dssp CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4789999987642 2699999999999999999999999999999999999999999988
No 86
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.02 E-value=1e-09 Score=82.26 Aligned_cols=67 Identities=12% Similarity=0.206 Sum_probs=59.9
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.|.+.+.|.. .++|+++..+. ..+++|..|.+||+|++.| |+.||+|++|||+++.+.+++++.++|
T Consensus 10 ~~~~~l~~~~----------~g~G~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 77 (98)
T 2jxo_A 10 PRLCTMKKGP----------SGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAI 77 (98)
T ss_dssp CEEEEEECTT----------TCCCEEEECCCSSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred cEEEEEEeCC----------CcccEEEEecCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4778888876 78999998754 2479999999999999988 999999999999999999999999999
No 87
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.02 E-value=8.3e-10 Score=85.00 Aligned_cols=68 Identities=18% Similarity=0.259 Sum_probs=59.6
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEe---C-----CCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKM---N-----DEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~---~-----e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
...|.+.|.. .+||+++.. + ...+++|.+|.+||+|++.|.|+.||.|++|||+++.+.++.
T Consensus 5 ~~~v~l~k~~----------~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~ 74 (113)
T 2g5m_B 5 LFPVELEKDS----------EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQS 74 (113)
T ss_dssp EEEEECCCCS----------SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHH
T ss_pred EEEEEEEeCC----------CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 4567777875 789999987 1 234799999999999999999999999999999999999999
Q ss_pred HHHhhc
Q psy337 166 ALQKIL 171 (255)
Q Consensus 166 el~~iL 171 (255)
++..++
T Consensus 75 ~~~~~~ 80 (113)
T 2g5m_B 75 FAASVL 80 (113)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999888
No 88
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=2.2e-09 Score=82.27 Aligned_cols=69 Identities=14% Similarity=0.172 Sum_probs=61.0
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-----CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-----EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNAL 167 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-----~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel 167 (255)
..+.|.+.|.. .++|+++..+. ...++|..|..||+|++.|.|++||+|++|||+++.+.++.++
T Consensus 8 ~~~~v~l~~~~----------~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~ 77 (110)
T 1um1_A 8 YVFTVELERGP----------SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRA 77 (110)
T ss_dssp CEEEEEEECCT----------TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHH
T ss_pred cEEEEEEEECC----------CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 35678888876 78999998743 2369999999999999999999999999999999999999999
Q ss_pred Hhhc
Q psy337 168 QKIL 171 (255)
Q Consensus 168 ~~iL 171 (255)
..++
T Consensus 78 ~~~~ 81 (110)
T 1um1_A 78 VDLI 81 (110)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9888
No 89
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.01 E-value=2.4e-09 Score=85.03 Aligned_cols=69 Identities=14% Similarity=0.212 Sum_probs=60.4
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC-----------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCC
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND-----------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQ 162 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-----------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~ 162 (255)
.+.+.+.|.. ...||+++.... ..+++|..|..||+|++.|.|++||+|++|||+++.+.
T Consensus 25 p~~v~l~k~~---------~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~ 95 (123)
T 2iwq_A 25 PRRVELWREP---------SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDA 95 (123)
T ss_dssp CEEEEECCCT---------TSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTC
T ss_pred CEEEEEEecC---------CCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCC
Confidence 4778888876 578999987532 23699999999999999998999999999999999999
Q ss_pred CHHHHHhhc
Q psy337 163 SVNALQKIL 171 (255)
Q Consensus 163 ~~eel~~iL 171 (255)
+.++++++|
T Consensus 96 ~~~~~~~~l 104 (123)
T 2iwq_A 96 SHEQAVEAI 104 (123)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999999999
No 90
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=8.7e-10 Score=84.24 Aligned_cols=69 Identities=16% Similarity=0.221 Sum_probs=60.6
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEE-----eCC-----CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCC
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLK-----MND-----EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQ 162 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk-----~~e-----~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~ 162 (255)
..+.|.|.|.. ++||+++. .+. +.+++|.+|..||+|++.|.|+.||+|++|||+++.+.
T Consensus 9 ~~~~v~l~k~~----------~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~ 78 (108)
T 1q7x_A 9 DIFEVELAKND----------NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGA 78 (108)
T ss_dssp SEEEEEEESSS----------CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSC
T ss_pred cEEEEEEEECC----------CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCC
Confidence 35778888875 89999998 321 34799999999999999999999999999999999999
Q ss_pred CHHHHHhhc
Q psy337 163 SVNALQKIL 171 (255)
Q Consensus 163 ~~eel~~iL 171 (255)
++.+++.++
T Consensus 79 ~~~~~~~~~ 87 (108)
T 1q7x_A 79 THKQAVETL 87 (108)
T ss_dssp TTSHHHHHH
T ss_pred CHHHHHHHH
Confidence 999999888
No 91
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.01 E-value=5.9e-10 Score=86.02 Aligned_cols=68 Identities=21% Similarity=0.337 Sum_probs=60.8
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC---CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE---GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~---g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
.+.+.+.|.. .+||+++..+.+ +.++|.+|..||+|++.|.|+.||+|++|||+.|.+.+++++..+
T Consensus 18 ~~~v~l~~~~----------~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 87 (116)
T 2dm8_A 18 EMIIEISKGR----------SGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITA 87 (116)
T ss_dssp CEEEEEECCS----------SCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHH
T ss_pred EEEEEEEECC----------CcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4678888875 789999986543 579999999999999999999999999999999999999999998
Q ss_pred c
Q psy337 171 L 171 (255)
Q Consensus 171 L 171 (255)
+
T Consensus 88 l 88 (116)
T 2dm8_A 88 L 88 (116)
T ss_dssp H
T ss_pred H
Confidence 8
No 92
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.57 E-value=3.4e-11 Score=94.45 Aligned_cols=70 Identities=23% Similarity=0.248 Sum_probs=62.3
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
.+|.|.+.|.. ++++|+++..+.+ .+++|++|..||+|++++.|++||+|++|||+++.+.+.++++.+
T Consensus 27 ~~~~v~l~k~~---------~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~ 97 (112)
T 2lob_A 27 GIRKVLLLKED---------HEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTI 97 (112)
Confidence 35889999987 7899999987542 369999999999999988999999999999999999999999988
Q ss_pred c
Q psy337 171 L 171 (255)
Q Consensus 171 L 171 (255)
|
T Consensus 98 l 98 (112)
T 2lob_A 98 L 98 (112)
Confidence 8
No 93
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.00 E-value=1.5e-09 Score=82.00 Aligned_cols=53 Identities=32% Similarity=0.550 Sum_probs=48.6
Q ss_pred CCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+.+|+++.. | +|++|..||+|++.| |+.||+|++|||+++.+.++++++++|
T Consensus 23 ~~~lG~~~~~---G--~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l 75 (90)
T 1y7n_A 23 RYQLGFSVQN---G--IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHIL 75 (90)
T ss_dssp TSCCCEEEET---T--EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHH
T ss_pred ccccCeEecC---C--EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3679998853 3 899999999999988 999999999999999999999999999
No 94
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.00 E-value=1.6e-09 Score=81.01 Aligned_cols=67 Identities=10% Similarity=0.131 Sum_probs=59.6
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC--C--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHh
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND--E--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQK 169 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~ 169 (255)
.|.|.+.|.. .++|+++.... + .+++|..|..||+|++.| |+.||+|++|||+.+.+.+++++.+
T Consensus 4 ~r~v~l~k~~----------~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~ 72 (96)
T 2v90_A 4 PRCLHLEKGP----------QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVS 72 (96)
T ss_dssp CEEEEEECBT----------TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHH
T ss_pred CEEEEEEeCC----------CcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 5789999986 69999998632 1 259999999999999988 9999999999999999999999999
Q ss_pred hc
Q psy337 170 IL 171 (255)
Q Consensus 170 iL 171 (255)
+|
T Consensus 73 ~l 74 (96)
T 2v90_A 73 RI 74 (96)
T ss_dssp HH
T ss_pred HH
Confidence 99
No 95
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.00 E-value=1.4e-09 Score=85.77 Aligned_cols=70 Identities=13% Similarity=0.189 Sum_probs=61.6
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeC-------CCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMN-------DEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~-------e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
..+.|.+.|.. ..+||+++... ...+++|.+|..||+|++.|.|+.||+|++|||+++.+.+++
T Consensus 15 ~~~~v~l~~~~---------~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~ 85 (129)
T 2dmz_A 15 ETYNVELVRKD---------GQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANH 85 (129)
T ss_dssp EEEEEEECCCT---------TCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHH
T ss_pred cEEEEEEEeCC---------CCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 35678887755 58899999863 235799999999999999999999999999999999999999
Q ss_pred HHHhhc
Q psy337 166 ALQKIL 171 (255)
Q Consensus 166 el~~iL 171 (255)
++.++|
T Consensus 86 ~~~~~l 91 (129)
T 2dmz_A 86 DVVEVL 91 (129)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999999
No 96
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.00 E-value=1.4e-09 Score=85.56 Aligned_cols=68 Identities=19% Similarity=0.216 Sum_probs=60.7
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
...|.+.|.. .++|+++..+. +..++|.+|..||+|++.|.|+.||+|++|||+.+.+.++++++++|
T Consensus 20 ~~~v~l~~~~----------~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 89 (123)
T 1ueq_A 20 FLSTTLKKSN----------MGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLF 89 (123)
T ss_dssp EEEEEEECCT----------TSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred EEEEEEEeCC----------CceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4667888875 78999999644 34699999999999999999999999999999999999999999999
No 97
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.99 E-value=1.5e-09 Score=83.24 Aligned_cols=68 Identities=19% Similarity=0.274 Sum_probs=60.5
Q ss_pred ceeeeeecCCCccccccCCCcceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 95 PISRFQMSYPGTFLHSRFPVNNGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 95 RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..|.+.|.. ..++|+++..+. ...++|.++..||+|++.|+|+.||+|++|||+.+.+.+++++.++|
T Consensus 3 ~~v~l~~~~---------~~glG~~~~~~~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l 71 (112)
T 1qau_A 3 ISVRLFKRK---------VGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVL 71 (112)
T ss_dssp EEEEEECBT---------TTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred EEEEEEcCC---------CCceeEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 457787876 578999998765 24799999999999999999999999999999999998899999999
No 98
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.99 E-value=2.2e-09 Score=81.82 Aligned_cols=69 Identities=12% Similarity=0.137 Sum_probs=59.0
Q ss_pred cceeeee-ecCCCccccccCCCcceEEEEeCC-------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 94 SPISRFQ-MSYPGTFLHSRFPVNNGITLKMND-------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 94 ~RiV~l~-K~~~~~~~~s~~~epLGiTIk~~e-------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
...|.+. ++. ..+||+++..+. ..+++|.+|..||+|++.|.|++||+|++|||++|.+.+++
T Consensus 13 ~~~v~l~r~~~---------~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~ 83 (108)
T 2jre_A 13 LYSVELFREKD---------TSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQS 83 (108)
T ss_dssp EEEEEEECCST---------TSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHH
T ss_pred EEEEEEEecCC---------CCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 4567775 344 588999998642 24799999999999999999999999999999999999999
Q ss_pred HHHhhc
Q psy337 166 ALQKIL 171 (255)
Q Consensus 166 el~~iL 171 (255)
++..+|
T Consensus 84 ~~~~~l 89 (108)
T 2jre_A 84 DVVEVL 89 (108)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999888
No 99
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.99 E-value=4.3e-09 Score=77.72 Aligned_cols=68 Identities=12% Similarity=0.046 Sum_probs=58.7
Q ss_pred cceeeeeecCCCccccccCC-CcceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFP-VNNGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~-epLGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+.|.+.|.. + +.+|+++..+. ..+++|..|..||+|++.| |+.||+|++|||+.+.+.+..++..++
T Consensus 7 ~~~v~l~k~~---------~~~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~ 76 (91)
T 1m5z_A 7 LHKVTLYKDS---------GMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLI 76 (91)
T ss_dssp EEEEEEECCT---------TCSSSSEEEEECTTSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred eEEEEEEECC---------CCCCccEEEEeccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5668888865 3 57999998755 3579999999999999988 999999999999999999888888777
No 100
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.99 E-value=2.3e-09 Score=81.19 Aligned_cols=69 Identities=20% Similarity=0.213 Sum_probs=60.8
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC----CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND----EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQ 168 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e----~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~ 168 (255)
..+.|.+.|.. .++|+++..+. +..++|..|..|++|++.|.|+.||+|++|||+.+.+.+++++.
T Consensus 11 ~~~~v~l~~~~----------~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~ 80 (104)
T 2djt_A 11 GHFSVELVRGY----------AGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAV 80 (104)
T ss_dssp CCEEEEEECCS----------SSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHH
T ss_pred ceEEEEEEeCC----------CCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 35678888876 78999998642 34799999999999999998999999999999999999999999
Q ss_pred hhc
Q psy337 169 KIL 171 (255)
Q Consensus 169 ~iL 171 (255)
.++
T Consensus 81 ~~~ 83 (104)
T 2djt_A 81 ERI 83 (104)
T ss_dssp HHH
T ss_pred HHH
Confidence 888
No 101
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.99 E-value=1.4e-09 Score=82.27 Aligned_cols=68 Identities=15% Similarity=0.196 Sum_probs=60.9
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..|.|.+.|.. .++|+++..+. ..+++|.+|..||+|++.| |+.||+|++|||+.+.+.+++++.++|
T Consensus 6 ~~r~v~l~k~~----------~g~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 74 (102)
T 2d90_A 6 SGRVVVIKKGS----------NGYGFYLRAGPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMI 74 (102)
T ss_dssp SSEEEEEECCS----------SSSSCEEEECSSSSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHH
T ss_pred CCEEEEEeeCC----------CCccEEEEeecCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35889999986 79999999754 3579999999999999988 899999999999999999899999888
No 102
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.98 E-value=8.6e-10 Score=83.83 Aligned_cols=68 Identities=18% Similarity=0.212 Sum_probs=60.3
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..|.|.+.|.. .++|+++.... ..+++|..|..||+|++.| |+.||+|++|||+++.+.+++++..++
T Consensus 8 ~~r~v~l~k~~----------~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~ 76 (106)
T 2eei_A 8 QPRLCYLVKEG----------GSYGFSLKTVQGKKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKV 76 (106)
T ss_dssp SSEEEEEECCS----------SSCSCCEECCSSCCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEEECC----------CCCCEEEEeccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35889999965 89999997644 3479999999999999988 999999999999999999999999888
No 103
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.98 E-value=1.9e-09 Score=82.58 Aligned_cols=68 Identities=19% Similarity=0.323 Sum_probs=59.8
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC-----CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-----GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQ 168 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-----g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~ 168 (255)
...+.+.|.. .++|+++....+ .+++|..|..||+|++.|.|+.||+|++|||+++.+.+++++.
T Consensus 12 ~~~~~l~~~~----------~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~ 81 (111)
T 2koj_A 12 RLNIQLKKGT----------EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVV 81 (111)
T ss_dssp EEEEEEECBT----------TBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHH
T ss_pred EEEEEEEECC----------CccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 3556777765 789999987542 4699999999999999998999999999999999999999999
Q ss_pred hhc
Q psy337 169 KIL 171 (255)
Q Consensus 169 ~iL 171 (255)
++|
T Consensus 82 ~~l 84 (111)
T 2koj_A 82 SLL 84 (111)
T ss_dssp HHH
T ss_pred HHH
Confidence 998
No 104
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.98 E-value=2.6e-09 Score=78.44 Aligned_cols=58 Identities=21% Similarity=0.275 Sum_probs=52.4
Q ss_pred CCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..++|+++..+.+ .+++|.+|.+||+|++.| |+.||+|++|||+++.+.+++++.++|
T Consensus 11 ~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 70 (87)
T 2pa1_A 11 PAPWGFRITGGRDFHTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKI 70 (87)
T ss_dssp SSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHH
T ss_pred CCccCEEEecccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5789999987553 479999999999999966 899999999999999999999999999
No 105
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.98 E-value=3.2e-09 Score=79.43 Aligned_cols=66 Identities=23% Similarity=0.288 Sum_probs=58.6
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..|.|.+.|.. .++|+++..+ ..++|..|..||+|++.| |+.||+|++|||+.+.+.++.++.+.+
T Consensus 8 ~~r~v~l~~~~----------~~~G~~l~~~--~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~ 73 (93)
T 2dls_A 8 VQRCVIIQKDQ----------HGFGFTVSGD--RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLI 73 (93)
T ss_dssp CEEEEEEECSS----------SSCCEEEECS--SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHH
T ss_pred CCEEEEEEeCC----------CceeEEEeCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhh
Confidence 35888898876 7899999853 469999999999999988 999999999999999999888888877
No 106
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.97 E-value=2.8e-09 Score=82.71 Aligned_cols=69 Identities=19% Similarity=0.243 Sum_probs=61.1
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC-CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..|.|.|.|.. .+||+++..+.+ .+++|..|..||+|++.|.|+.||+|++|||+.+.+.++.++..++
T Consensus 14 ~~~~v~l~k~~----------~glG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 83 (119)
T 1tp5_A 14 EPRRIVIHRGS----------TGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIAL 83 (119)
T ss_dssp SCEEEEEECTT----------SCCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred ccEEEEEEECC----------CCccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46889999986 679999997542 5799999999999999998999999999999999999888887777
No 107
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.97 E-value=2.2e-09 Score=84.35 Aligned_cols=70 Identities=19% Similarity=0.242 Sum_probs=63.2
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC-CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..+.|.+.|.. ..++|+++....+ ..++|.+|..||+|++.|+|+.||+|++|||+.+.+.+.+++.++|
T Consensus 8 ~~~~v~l~~~~---------~~glG~~~~~~~~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l 78 (127)
T 1b8q_A 8 NVISVRLFKRK---------VGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVL 78 (127)
T ss_dssp CSEEEEEECTT---------TSCCSCCEEECTTSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHH
T ss_pred ceEEEEEEeCC---------CCcEeEEEEecCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46788999986 5799999987653 4799999999999999999999999999999999999999999999
No 108
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.96 E-value=4.4e-09 Score=77.76 Aligned_cols=58 Identities=17% Similarity=0.289 Sum_probs=52.7
Q ss_pred CcceEEEEeCC------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 114 VNNGITLKMND------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 114 epLGiTIk~~e------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+||+++..+. ..+++|..|..||+|++.|.|+.||+|++|||+.+.+.+++++..++
T Consensus 15 ~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (97)
T 2iwn_A 15 QGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVL 78 (97)
T ss_dssp TBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 78999998752 34799999999999999998999999999999999999999999887
No 109
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.96 E-value=3.1e-09 Score=78.41 Aligned_cols=58 Identities=22% Similarity=0.327 Sum_probs=52.0
Q ss_pred CCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+.++|+++..+. ..+++|..|.+||+|++.| |+.||+|++|||+++.+.+++++..++
T Consensus 12 ~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~ 71 (89)
T 2q3g_A 12 PAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKI 71 (89)
T ss_dssp SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHH
T ss_pred CCcccEEEECcCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 478999998744 2369999999999999988 999999999999999999999999888
No 110
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.95 E-value=2.6e-09 Score=83.01 Aligned_cols=67 Identities=16% Similarity=0.246 Sum_probs=59.4
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC--------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
.+.|.|.|.. +++||++|..+.+ .+++|.+|.+||+|+ +.|++||+|++|||++|.+.+++
T Consensus 15 ~~~v~l~k~~---------~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~--~gL~~GD~I~~Vng~~v~~~~~~ 83 (117)
T 2csj_A 15 QYTVTLQKDS---------KRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD--GLLQENDRVVMVNGTPMEDVLHS 83 (117)
T ss_dssp EEEEEEECCS---------SSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH--HHBCTTCEEEEESSCBCBTCCHH
T ss_pred EEEEEEEECC---------CCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc--ccCCCCCEEEEECCEECCCcCHH
Confidence 5778899886 6899999987532 359999999999996 88999999999999999999999
Q ss_pred HHHhhc
Q psy337 166 ALQKIL 171 (255)
Q Consensus 166 el~~iL 171 (255)
+++.++
T Consensus 84 ~~~~~l 89 (117)
T 2csj_A 84 FAVQQL 89 (117)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999888
No 111
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.95 E-value=6.4e-10 Score=81.11 Aligned_cols=65 Identities=23% Similarity=0.349 Sum_probs=58.2
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.|.|.+.|.. .++|+++..+ .+++|..+..||+|++.| |+.||+|++|||+++.+.+++++.+++
T Consensus 3 ~r~v~l~~~~----------~g~G~~~~~~--~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 67 (83)
T 2kv8_A 3 VRSVEVARGR----------AGYGFTLSGQ--APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLI 67 (83)
T ss_dssp EEEEEECCCS----------SCCSCBCCCS--SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred cEEEEEEeCC----------CcccEEEEcC--CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4678888886 7899998753 369999999999999988 999999999999999999999999998
No 112
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.94 E-value=5.3e-09 Score=76.77 Aligned_cols=58 Identities=19% Similarity=0.329 Sum_probs=52.1
Q ss_pred CCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+.++|+++..+.+ .+++|..|..||+|++.| |+.||+|++|||+++.+.+++++.+++
T Consensus 12 ~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~ 71 (88)
T 2uzc_A 12 PAPWGFRLQGGKDFNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKI 71 (88)
T ss_dssp SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCcccEEEECcCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3789999986542 369999999999999988 999999999999999999999999888
No 113
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.94 E-value=2.1e-09 Score=84.48 Aligned_cols=70 Identities=20% Similarity=0.283 Sum_probs=62.1
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeC------CCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMN------DEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNA 166 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~------e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~ee 166 (255)
..+.|.+.|.. ...+|+++..+ ....++|.+|..|++|++.|.|+.||+|++|||+.+.++++++
T Consensus 15 ~~~~v~l~k~~---------~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~ 85 (122)
T 1v5q_A 15 ETTEVVLTADP---------VTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEE 85 (122)
T ss_dssp EEEEEEECCCS---------SSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHH
T ss_pred eeEEEEEEeCC---------CCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 35778898886 68999999964 1346899999999999999989999999999999999999999
Q ss_pred HHhhc
Q psy337 167 LQKIL 171 (255)
Q Consensus 167 l~~iL 171 (255)
+.++|
T Consensus 86 ~~~~l 90 (122)
T 1v5q_A 86 ANQLL 90 (122)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99999
No 114
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.92 E-value=5e-09 Score=82.05 Aligned_cols=68 Identities=12% Similarity=0.182 Sum_probs=61.4
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC-CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..|.+.+.|.. .++|+++..+.+ ++++|..|..||+|++.| |+.||+|++|||+++.+.+++++.++|
T Consensus 9 ~~r~v~l~~~~----------~g~G~~l~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 77 (128)
T 2kjd_A 9 RPRLCTMKKGP----------SGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAI 77 (128)
T ss_dssp CCEEEEEECCS----------SSCCEEEEECSSSCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CcEEEEEecCC----------CcccEEEEecCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45889999986 789999987652 479999999999999988 999999999999999999999999999
No 115
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=2.1e-09 Score=80.91 Aligned_cols=68 Identities=21% Similarity=0.266 Sum_probs=58.8
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
...+.+.|.. .++|+++..+.+ ..++|..|..||+|++.|.|+.||+|++|||+++.+.+++++..++
T Consensus 12 ~~~v~l~~~~----------~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 81 (103)
T 1wfv_A 12 YFTVDMEKGA----------KGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELI 81 (103)
T ss_dssp CEECCEECCT----------TSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred EEEEEEecCC----------CcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3456677765 679999987543 3699999999999999998999999999999999999999999888
No 116
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.92 E-value=1e-08 Score=85.40 Aligned_cols=70 Identities=14% Similarity=0.323 Sum_probs=61.0
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC----CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccC--CCHHHH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE----GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGN--QSVNAL 167 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~----g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g--~~~eel 167 (255)
...+.+.|+. ++||++|..+.+ .+++|+.|+.||+|++.|.|+.||+|++|||+++.+ .++.++
T Consensus 19 ~~~v~~~~~~----------~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 88 (206)
T 3r0h_A 19 KILIELKVEK----------KPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKV 88 (206)
T ss_dssp CEEEEEECTT----------SCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHH
T ss_pred EEEEEEEeCC----------CCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHH
Confidence 4567888865 899999987542 258999999999999999999999999999999999 999999
Q ss_pred HhhcCC
Q psy337 168 QKILTP 173 (255)
Q Consensus 168 ~~iLtp 173 (255)
..++..
T Consensus 89 ~~~~~~ 94 (206)
T 3r0h_A 89 HQLFHT 94 (206)
T ss_dssp HHHHHS
T ss_pred HHHHHh
Confidence 988843
No 117
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=4.4e-09 Score=79.47 Aligned_cols=69 Identities=23% Similarity=0.361 Sum_probs=61.1
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
.++.|.+.|.. ...||+++.... ..+++|..|..||+|++.| |+.||+|++|||+.+.+.+++++..+
T Consensus 10 ~~~~v~l~~~~---------~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~ 79 (100)
T 2eeh_A 10 IIHSVRVEKSP---------AGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKV 79 (100)
T ss_dssp EECCEEECCCS---------SSSCSEEEECCTTTTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHH
T ss_pred eEEEEEEEECC---------CCCccEEEEccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHh
Confidence 46889999987 567999998754 2479999999999999988 99999999999999999988999988
Q ss_pred c
Q psy337 171 L 171 (255)
Q Consensus 171 L 171 (255)
+
T Consensus 80 ~ 80 (100)
T 2eeh_A 80 L 80 (100)
T ss_dssp H
T ss_pred h
Confidence 8
No 118
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=8e-09 Score=80.05 Aligned_cols=68 Identities=22% Similarity=0.368 Sum_probs=59.4
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..|.|.+.|.. .++|+++..+.+.+++|..|..||+|++.| |+.||+|++|||+.+.+.+..+...++
T Consensus 19 ~~~~v~l~~~~----------~~lG~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~ 86 (117)
T 1uit_A 19 EPRHVKVQKGS----------EPLGISIVSGEKGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLII 86 (117)
T ss_dssp CCEEEEEECSS----------CCCCEEEEECTTSCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHT
T ss_pred CCEEEEEEeCC----------CCccEEEEccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35678888876 799999998655689999999999999988 999999999999999999877777555
No 119
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.91 E-value=5.1e-09 Score=82.30 Aligned_cols=66 Identities=18% Similarity=0.114 Sum_probs=58.6
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..|.|.|.|.+ .++|+++.. ..+++|+.|..||+|++.| |+.||+|++|||+++.+.+++++++++
T Consensus 23 ~~r~v~l~k~~----------~~~G~~l~~--~~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i 88 (109)
T 2vsv_A 23 MPRSIRFTAEE----------GDLGFTLRG--NAPVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLL 88 (109)
T ss_dssp SCEEEEECCGG----------GCCCEEEES--SSSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEEeCC----------CceeEEEeC--CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35889999975 789999974 3468999999999999976 899999999999999999999999998
No 120
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.89 E-value=7.4e-09 Score=86.24 Aligned_cols=58 Identities=21% Similarity=0.351 Sum_probs=53.4
Q ss_pred CCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
...||+++...+ .+++|.+|..||+|++.|.|+.||+|++|||++|.+.+++++.++|
T Consensus 124 ~~~lG~~~~~~~-~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l 181 (206)
T 3r0h_A 124 GKELGLSLSPNE-IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALF 181 (206)
T ss_dssp TCCCCEEEEECS-SCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCccCeEEEcCC-ceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 568999998654 4699999999999999999999999999999999999999999999
No 121
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.87 E-value=1.2e-08 Score=80.27 Aligned_cols=68 Identities=19% Similarity=0.304 Sum_probs=59.0
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC-----CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-----GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQ 168 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-----g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~ 168 (255)
...+.+.|.. .++|+++..... .+++|..|..||+|++.|.|++||+|++|||+++.+.+.+++.
T Consensus 31 ~~~v~l~~~~----------~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~ 100 (121)
T 2kom_A 31 RLNIQLKKGT----------EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVV 100 (121)
T ss_dssp EEEEEEECCT----------TCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHH
T ss_pred EEEEEEEcCC----------CcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHH
Confidence 3556666765 789999987542 4699999999999999998999999999999999999899999
Q ss_pred hhc
Q psy337 169 KIL 171 (255)
Q Consensus 169 ~iL 171 (255)
++|
T Consensus 101 ~~l 103 (121)
T 2kom_A 101 SLL 103 (121)
T ss_dssp HHH
T ss_pred HHH
Confidence 988
No 122
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.87 E-value=8.2e-09 Score=77.47 Aligned_cols=58 Identities=22% Similarity=0.246 Sum_probs=51.0
Q ss_pred CCcceEEEEeCCC---------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDE---------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~---------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+.++|++++.... .+++|..+..||+|++.| |+.||+|++|||+++.+.+++++..+|
T Consensus 12 ~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 78 (99)
T 3khf_A 12 GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELL 78 (99)
T ss_dssp CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3899999975321 145899999999999988 999999999999999999999999999
No 123
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.86 E-value=1.2e-08 Score=83.32 Aligned_cols=69 Identities=17% Similarity=0.250 Sum_probs=61.2
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC-------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNA 166 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~ee 166 (255)
.+.|.+.|+. ++||+++..+.+ .+++|+.|.+||+|++.|.|+.||+|++|||+++.+.++.+
T Consensus 6 ~~~v~l~~~~----------~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~ 75 (196)
T 3gsl_A 6 YEEITLERGN----------SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSA 75 (196)
T ss_dssp EEEEEEECBT----------TBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH
T ss_pred EEEEEEEECC----------CCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH
Confidence 5678888876 889999997642 36999999999999999999999999999999999999999
Q ss_pred HHhhcC
Q psy337 167 LQKILT 172 (255)
Q Consensus 167 l~~iLt 172 (255)
+..++.
T Consensus 76 ~~~~~~ 81 (196)
T 3gsl_A 76 AVEALK 81 (196)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888883
No 124
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=2.4e-09 Score=81.84 Aligned_cols=69 Identities=19% Similarity=0.230 Sum_probs=61.5
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..+.|.+.|.. .++|+++..+. ...++|..|..|++|++.|.|+.||+|++|||+.+.+.+++++..++
T Consensus 15 ~~~~v~l~k~~----------~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~ 84 (113)
T 1um7_A 15 EPRKIILHKGS----------TGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAAL 84 (113)
T ss_dssp SEEEEEEECCS----------SCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred ceEEEEEEECC----------CcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35888998876 78999998765 25799999999999999998999999999999999999999998888
No 125
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.86 E-value=1.1e-08 Score=85.36 Aligned_cols=70 Identities=27% Similarity=0.411 Sum_probs=62.5
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+.|.+.|.. +++||+++..+. ...++|++|.+||+|++.|.|+.||+|++|||+++.+.+++++..++
T Consensus 8 ~~~v~l~~~~---------~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (200)
T 2qt5_A 8 STVVELMKKE---------GTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLL 78 (200)
T ss_dssp EEEEEEECCT---------TCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CEEEEEEeCC---------CCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5778888877 789999998754 34699999999999999889999999999999999999999999888
Q ss_pred C
Q psy337 172 T 172 (255)
Q Consensus 172 t 172 (255)
.
T Consensus 79 ~ 79 (200)
T 2qt5_A 79 K 79 (200)
T ss_dssp H
T ss_pred H
Confidence 3
No 126
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=2.1e-09 Score=84.85 Aligned_cols=67 Identities=19% Similarity=0.290 Sum_probs=57.9
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeC------------------------------CCCcEEEEEeeccchhhhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMN------------------------------DEGKCIVARIMHGGMIHRQA 143 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~------------------------------e~g~IvIaRIl~GG~AdRsG 143 (255)
.|.|.|.|.. .++|+++... ....++|.+|..||+|++.|
T Consensus 9 ~r~v~l~r~~----------~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG 78 (126)
T 2yuy_A 9 PKTVTLKRTS----------QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG 78 (126)
T ss_dssp CCCEEEECCS----------SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT
T ss_pred CEEEEEEECC----------CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC
Confidence 5788898876 6788888631 12358999999999999988
Q ss_pred ccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 144 TLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 144 lLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
|+.||+|++|||++|.++++++++++|
T Consensus 79 -L~~GD~I~~ing~~v~~~~~~~~~~~l 105 (126)
T 2yuy_A 79 -LCTGDRIIKVNGESVIGKTYSQVIALI 105 (126)
T ss_dssp -CCSSCCCCEETTEECSSCCHHHHHHHH
T ss_pred -CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 999999999999999999999999999
No 127
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.85 E-value=1.5e-08 Score=72.35 Aligned_cols=55 Identities=22% Similarity=0.388 Sum_probs=50.7
Q ss_pred CCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+.+|+.+. ++++|.+|.+||+|++.|.|+.||+|++|||+++.+.+++++.++|
T Consensus 12 ~~~~g~~~~----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 66 (81)
T 2rcz_A 12 NEEYGLRLA----SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLI 66 (81)
T ss_dssp TCCCCEEEE----EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCCCEEEe----CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 578898876 3699999999999999988999999999999999999999999998
No 128
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.85 E-value=2.4e-08 Score=74.35 Aligned_cols=65 Identities=20% Similarity=0.327 Sum_probs=54.5
Q ss_pred eeeeeecCCCccccccCCCcceEEEEeC--------CCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHH
Q psy337 96 ISRFQMSYPGTFLHSRFPVNNGITLKMN--------DEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNAL 167 (255)
Q Consensus 96 iV~l~K~~~~~~~~s~~~epLGiTIk~~--------e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel 167 (255)
.+.+.|.. .+||+++..+ ....++|..|..||+|++.| |+.||+|++|||+++.+.+..++
T Consensus 6 ~v~~~~~~----------~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 74 (97)
T 2w4f_A 6 TLTILRQT----------GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEA 74 (97)
T ss_dssp EEEEECBT----------TBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred EEEEEeCC----------CceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHH
Confidence 35666765 7999999863 23579999999999999988 99999999999999999887776
Q ss_pred Hhhc
Q psy337 168 QKIL 171 (255)
Q Consensus 168 ~~iL 171 (255)
...+
T Consensus 75 ~~~~ 78 (97)
T 2w4f_A 75 VEAL 78 (97)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6665
No 129
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.83 E-value=2.4e-08 Score=75.85 Aligned_cols=67 Identities=15% Similarity=0.277 Sum_probs=57.5
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC--------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
.+.|.+.|.+ +.++|+++..+.+ .+++|.+|..||+|+ +.|+.||+|++|||+++.+.+..
T Consensus 8 ~~~v~l~k~~---------~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~--agl~~GD~I~~vng~~v~~~~~~ 76 (107)
T 2h2b_A 8 QHTVTLHRAP---------GFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE--GQLQENDRVAMVNGVSMDNVEHA 76 (107)
T ss_dssp EEEEEEECBT---------TTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB--TTBCTTCEEEEETTEECTTCCHH
T ss_pred eEEEEEEeCC---------CCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh--hCCCCCCEEEEECCEECCCccHH
Confidence 5789999987 6899999986432 379999999999999 78999999999999999998777
Q ss_pred HHHhhc
Q psy337 166 ALQKIL 171 (255)
Q Consensus 166 el~~iL 171 (255)
+....+
T Consensus 77 ~~~~~~ 82 (107)
T 2h2b_A 77 FAVQQL 82 (107)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 766555
No 130
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.83 E-value=1.8e-08 Score=74.55 Aligned_cols=58 Identities=22% Similarity=0.279 Sum_probs=52.2
Q ss_pred CCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+.++|+++..+.+ .+++|..|.+||+|++.| |+.||+|++|||+++.+.++.++..++
T Consensus 12 ~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 71 (91)
T 2pkt_A 12 PGPWGFRLVGGKDFEQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRI 71 (91)
T ss_dssp SSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCCCEEEEccCCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4789999987543 469999999999999987 999999999999999999989999988
No 131
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.82 E-value=1.4e-08 Score=73.88 Aligned_cols=58 Identities=21% Similarity=0.277 Sum_probs=51.0
Q ss_pred CCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+.++|+++..+. ..+++|.+|.+||+|++. .|+.||+|++|||+++.+.+++++..++
T Consensus 10 ~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a-Gl~~GD~I~~vng~~v~~~~~~~~~~~~ 69 (85)
T 1rgw_A 10 PGPWGFRLQGGKDFNMPLTISRITPGSKAAQS-QLSQGDLVVAIDGVNTDTMTHLEAQNKI 69 (85)
T ss_dssp SSCCCEEECCCGGGTSCCBEEEECTTSHHHHS-SCCCCSBEEEETTEECTTCCHHHHHHHH
T ss_pred CCccCEEEEeccCCCCCeEEEEECCCCHHHHc-CCCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 368999998644 236899999999999995 5999999999999999999999999888
No 132
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.81 E-value=1.9e-08 Score=76.18 Aligned_cols=56 Identities=21% Similarity=0.276 Sum_probs=50.2
Q ss_pred CcceEEEEeCC----------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 114 VNNGITLKMND----------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 114 epLGiTIk~~e----------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+||+++..+. ..+++|.+|.+||+|++ .|+.||+|++|||+++.+.+++++..++
T Consensus 21 ~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~--gL~~GD~I~~vng~~v~~~~~~~~~~~~ 86 (103)
T 1n7t_A 21 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK--LLQPGDKIIQANGYSFINIEHGQAVSLL 86 (103)
T ss_dssp SCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS--SCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH--CCCCCCEEEEECCEECCCCCHHHHHHHh
Confidence 57999998742 24799999999999999 7899999999999999999999999888
No 133
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.81 E-value=7.9e-09 Score=82.71 Aligned_cols=65 Identities=20% Similarity=0.126 Sum_probs=57.0
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..+.|.|.|.. .++||+|..+.. ..+|.+|+.+ ++.+.|++||.|++|||++|.+++|+|++++|
T Consensus 12 ~~~~V~L~Kg~----------~G~GFsI~~~~~-g~~V~~I~~~---~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~l 76 (113)
T 3soe_A 12 LLVTIPLIKGP----------KGFGFAIADSPT-GQKVKMILDS---QWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVL 76 (113)
T ss_dssp EEEEEEEECBT----------TBSSEEEEEETT-EEEEEEESCG---GGSTTCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CEEEEEEEECC----------CcccEEEeCCCC-CcEEEEecCh---HHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35789999986 899999976543 4679999983 57799999999999999999999999999999
No 134
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.80 E-value=6.2e-09 Score=81.53 Aligned_cols=65 Identities=22% Similarity=0.168 Sum_probs=57.8
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.|.|.+.|.. ..+|+++..+ ..++|..+..|++|++.| |+.||.|++|||+.|.+.+++++.++|
T Consensus 16 ~r~v~l~~~~----------~~~G~~l~~~--~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i 80 (111)
T 1vae_A 16 PRGIHFTVEE----------GDLGFTLRGN--TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLL 80 (111)
T ss_dssp CCCCCEECCS----------SCCSCCEESS--SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CeEEEEEcCC----------CcccEEEeCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5778888865 8899999743 468999999999999976 899999999999999998999999998
No 135
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=3.6e-08 Score=75.39 Aligned_cols=67 Identities=19% Similarity=0.307 Sum_probs=57.1
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeC--------CCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMN--------DEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~--------e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
...+.+.|.. ..+|+++..+ ....++|.+|..||+|++.| |+.||+|++|||+.+.+.+..
T Consensus 16 ~~~~~l~~~~----------~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~ 84 (110)
T 1x5q_A 16 ELTLTILRQT----------GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHH 84 (110)
T ss_dssp EEEEEEECSS----------SSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHH
T ss_pred eEEEEEecCC----------CeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHH
Confidence 3557777775 7999999853 23579999999999999988 999999999999999999888
Q ss_pred HHHhhc
Q psy337 166 ALQKIL 171 (255)
Q Consensus 166 el~~iL 171 (255)
++...+
T Consensus 85 ~~~~~~ 90 (110)
T 1x5q_A 85 EAVEAL 90 (110)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 877776
No 136
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.79 E-value=3.2e-08 Score=73.68 Aligned_cols=56 Identities=21% Similarity=0.276 Sum_probs=49.8
Q ss_pred CcceEEEEeCC----------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 114 VNNGITLKMND----------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 114 epLGiTIk~~e----------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+||++|..+. +.+++|.+|..||+|++ .|+.||+|++|||+++.+.++.+++.++
T Consensus 13 ~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~--gL~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (95)
T 1mfg_A 13 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK--LLQPGDKIIQANGYSFINIEHGQAVSLL 78 (95)
T ss_dssp SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT--TCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh--CCCCCCEEEEECCEEcCCCCHHHHHHHh
Confidence 47999998642 24799999999999999 7899999999999999999999988888
No 137
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.79 E-value=1.7e-08 Score=80.24 Aligned_cols=58 Identities=19% Similarity=0.246 Sum_probs=53.2
Q ss_pred CCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+++||+++..+.+.+++|..|..||+|++.| |+.||+|++|||+.|.+.+++++.++|
T Consensus 38 ~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l 95 (124)
T 3tsv_A 38 GDSVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFL 95 (124)
T ss_dssp SSCCCEEEEECTTSCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHH
T ss_pred CCceeEEEecCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3689999987656689999999999999988 999999999999999999999999977
No 138
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.79 E-value=1.8e-09 Score=100.82 Aligned_cols=74 Identities=23% Similarity=0.298 Sum_probs=64.5
Q ss_pred CcccceeeeeecCCCccccccCCCcceEEEEeCCCC----cEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHH
Q psy337 91 KIFSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEG----KCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNA 166 (255)
Q Consensus 91 ~~~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g----~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~ee 166 (255)
....|.|.+.|++ +++||++|..+.+| .++|++|++||+|++.|.|+.||+|++|||+++.+.++++
T Consensus 202 ~~~~~~V~i~k~~---------ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~ 272 (388)
T 3suz_A 202 SENCKELQLEKHK---------GEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLAT 272 (388)
T ss_dssp SSCCEEEEECCCS---------SCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTT
T ss_pred cccceEEEEECCC---------CCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHH
Confidence 4457899999987 79999999875544 4899999999999999999999999999999999999999
Q ss_pred HHhhcCC
Q psy337 167 LQKILTP 173 (255)
Q Consensus 167 l~~iLtp 173 (255)
++.+|..
T Consensus 273 ~~~~l~~ 279 (388)
T 3suz_A 273 CQGIIKG 279 (388)
T ss_dssp HHHHTTT
T ss_pred HHHHHHh
Confidence 9999853
No 139
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.77 E-value=2.3e-08 Score=77.31 Aligned_cols=69 Identities=17% Similarity=0.274 Sum_probs=59.7
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..+.+.+.+.. .+.+|+++.... ..+++|.+|..||+|++.| |+.||+|++|||+++.+.+++++.+++
T Consensus 13 dp~~~~l~~~~---------~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 82 (114)
T 2edz_A 13 NPRECKLSKQE---------GQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELV 82 (114)
T ss_dssp CCEEEEEECCT---------TCCCSCEEECCTTCCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHH
T ss_pred CCEEEEEeCCC---------CCcccEEEEEecCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45677777776 578999988643 3579999999999999988 899999999999999999999999998
No 140
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.77 E-value=1.8e-08 Score=74.12 Aligned_cols=65 Identities=22% Similarity=0.152 Sum_probs=55.0
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCC-CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+.|.+.|.. .++|+++....+ +.++|+.+ .||+|+ +.|+.||+|++|||+++.+.+++++.++|
T Consensus 4 ~~~v~l~k~~----------~g~G~~~~~~~~~~~~~v~~v-~~spA~--aGl~~GD~I~~vng~~v~~~~~~~~~~~l 69 (88)
T 3bpu_A 4 LITVHIVKGP----------MGFGFTIADSPGGGGQRVKQI-VDSPRS--RGLKEGDLIVEVNKKNVQALTHNQVVDML 69 (88)
T ss_dssp EEEEEEECBT----------TBSSCEEEECTTSSSEEEEEC-CC--CC--TTCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred EEEEEEEcCC----------CceeEEEEecCCCCcEEEEEe-cCChhH--hCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 4678888876 789999987643 57889887 999999 68999999999999999999999999988
No 141
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.76 E-value=4.9e-09 Score=84.80 Aligned_cols=67 Identities=13% Similarity=0.228 Sum_probs=59.9
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
...+.+.|.. ..||+++... ...++|.+|+.||+|++.|.|+.||+|++|||+.|.+.++++++++|
T Consensus 28 ~~~~~l~k~~----------~glG~~i~~~-~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l 94 (126)
T 1wif_A 28 VIQTKLTVGN----------LGLGLVVIQN-GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLL 94 (126)
T ss_dssp EEEEEEECCT----------TCCCCCEEEE-TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHH
T ss_pred eEEEEEecCC----------ceEeEEEEcC-CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 4567778876 7899999864 35699999999999999999999999999999999999999999999
No 142
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=2.7e-08 Score=75.02 Aligned_cols=70 Identities=16% Similarity=0.206 Sum_probs=58.5
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
..+.+.+.|+. ....+|+++.... ...++|..|..|++|++.| |+.||+|++|||+.+.+.+..++..+
T Consensus 8 ~~~~v~l~~~~--------~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~ 78 (101)
T 1uez_A 8 EVRLVSLRRAK--------AHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKA 78 (101)
T ss_dssp CCEEECCCCCC--------TTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHH
T ss_pred ccEEEEEEECC--------CCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHh
Confidence 46777777742 0478999998754 2479999999999999988 99999999999999999988887777
Q ss_pred c
Q psy337 171 L 171 (255)
Q Consensus 171 L 171 (255)
+
T Consensus 79 ~ 79 (101)
T 1uez_A 79 L 79 (101)
T ss_dssp S
T ss_pred h
Confidence 7
No 143
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.76 E-value=1.9e-08 Score=77.46 Aligned_cols=68 Identities=16% Similarity=0.277 Sum_probs=59.1
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.|.+.+.+.. ..+||+++..+. ..+++|.+|..|++|++.| |+.||+|++|||+.+.+.++.++..++
T Consensus 16 ~~~v~~~~~~---------~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~ 85 (114)
T 1x5n_A 16 EKKVFISLVG---------SRGLGCSISSGPIQKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVL 85 (114)
T ss_dssp SEEEEECCCS---------SCCCCEEEEECCSSSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHH
T ss_pred cEEEEEEEcC---------CCceeEEEeecCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4778887766 688999998653 3479999999999999988 999999999999999999888888887
No 144
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.76 E-value=1.3e-08 Score=77.14 Aligned_cols=69 Identities=25% Similarity=0.267 Sum_probs=57.7
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhh
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~i 170 (255)
..+.+.+.+.. ..++|+++..+.+ ..++|.+|.+||+|++.|.|++||+|++|||+++.+. ++++..+
T Consensus 9 ~~~~~~v~~~~---------~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~ 78 (100)
T 2edp_A 9 SFQYVPVQLQG---------GAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALIL 78 (100)
T ss_dssp CCEEEEEECCS---------CSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHH
T ss_pred CcEEEEEEECC---------CCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHH
Confidence 34666776665 5789999986432 3589999999999999989999999999999999986 7888888
Q ss_pred c
Q psy337 171 L 171 (255)
Q Consensus 171 L 171 (255)
+
T Consensus 79 ~ 79 (100)
T 2edp_A 79 I 79 (100)
T ss_dssp H
T ss_pred H
Confidence 8
No 145
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.76 E-value=3.7e-08 Score=80.40 Aligned_cols=67 Identities=18% Similarity=0.283 Sum_probs=57.4
Q ss_pred ceeeeeecCCCccccccCCCcceEEEEeCCC-------CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHH
Q psy337 95 PISRFQMSYPGTFLHSRFPVNNGITLKMNDE-------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNAL 167 (255)
Q Consensus 95 RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-------g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel 167 (255)
..+.+.|.. ..+|+++..... .+++|..|..||+|++.|.|+.||.|++|||++|.+.+++++
T Consensus 102 ~~v~l~~~~----------~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~ 171 (196)
T 3gsl_A 102 MEIKLIKGP----------KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDA 171 (196)
T ss_dssp EEEEEEEBT----------TBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHH
T ss_pred EEEEEecCC----------CCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHH
Confidence 445566655 589999986431 358999999999999999999999999999999999999999
Q ss_pred Hhhc
Q psy337 168 QKIL 171 (255)
Q Consensus 168 ~~iL 171 (255)
+++|
T Consensus 172 ~~~l 175 (196)
T 3gsl_A 172 VAAL 175 (196)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9999
No 146
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.75 E-value=3.2e-08 Score=82.70 Aligned_cols=70 Identities=20% Similarity=0.306 Sum_probs=61.8
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHH
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNAL 167 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel 167 (255)
.+.|.+.|.. .+++|+++..+. ...++|+.|.+||+|++.|.|+.||+|++|||+.+.+.+++++
T Consensus 7 ~~~v~l~~~~---------~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~ 77 (196)
T 1p1d_A 7 TTEVVLTADP---------VTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEA 77 (196)
T ss_dssp EEEEEEECBT---------TTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHH
T ss_pred EEEEEEEeCC---------CCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 4668888887 789999999862 2368999999999999999899999999999999999889999
Q ss_pred HhhcC
Q psy337 168 QKILT 172 (255)
Q Consensus 168 ~~iLt 172 (255)
.++|.
T Consensus 78 ~~~l~ 82 (196)
T 1p1d_A 78 NQLLR 82 (196)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99994
No 147
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.74 E-value=5.6e-08 Score=71.46 Aligned_cols=55 Identities=22% Similarity=0.388 Sum_probs=50.2
Q ss_pred CCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+.+|+.+. .+++|.+|..||+|++.|.|+.||+|++|||+++.+.+++++.++|
T Consensus 14 ~~~~g~~~~----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 68 (92)
T 3cyy_A 14 NEEYGLRLA----SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLI 68 (92)
T ss_dssp TSCCCEEEE----EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCCCEEEe----CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 467898876 3699999999999999988999999999999999999999999999
No 148
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.73 E-value=1.6e-08 Score=75.52 Aligned_cols=58 Identities=24% Similarity=0.306 Sum_probs=51.6
Q ss_pred CCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..++|+++..+.+ .+++|..|..||+|++.| |+.||+|++|||+++.+.+++++.++|
T Consensus 15 ~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 74 (94)
T 1vb7_A 15 PAPWGFRISGGRDFHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKI 74 (94)
T ss_dssp SSCCSBCCEEETTTTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCccEEEecccCCCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5789999986442 368999999999999866 899999999999999999999999999
No 149
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.72 E-value=4.1e-08 Score=72.27 Aligned_cols=55 Identities=24% Similarity=0.293 Sum_probs=49.6
Q ss_pred cceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 115 NNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 115 pLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+|+++... ..+++|.+|.+|++|++.| |+.||+|++|||+.+.+.+.+++.++|
T Consensus 18 ~lG~~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 72 (90)
T 2eaq_A 18 DFGFTIKWD-IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAM 72 (90)
T ss_dssp CCSEEEEEE-TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHH
T ss_pred cccEEEEec-CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHH
Confidence 699999854 3579999999999999987 899999999999999888899999888
No 150
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.71 E-value=2e-08 Score=76.10 Aligned_cols=65 Identities=18% Similarity=0.182 Sum_probs=56.8
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
...+.+.|.. ..+|+++... ..++|..|.+|++|++.| |+.||+|++|||+.+.+.+++++.++|
T Consensus 16 ~~~v~l~~~~----------~g~G~~~~~~--~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l 80 (100)
T 1whd_A 16 KLQITIRRGK----------DGFGFTICCD--SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEI 80 (100)
T ss_dssp EEEEEEECCS----------SSSSCBCCCS--SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHH
T ss_pred eEEEEEECCC----------CeeeEEEeCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3557777765 6899998763 569999999999999987 899999999999999999999999988
No 151
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.71 E-value=3.8e-08 Score=74.24 Aligned_cols=56 Identities=23% Similarity=0.331 Sum_probs=50.2
Q ss_pred cceEEEEeCC--------------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 115 NNGITLKMND--------------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 115 pLGiTIk~~e--------------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.||+++..+. ..+++|..|..||+|++.| |+.||+|++|||+++.+.+++++.++|
T Consensus 20 ~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 89 (104)
T 3sfj_A 20 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRL 89 (104)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred cccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5999998322 2359999999999999998 999999999999999999999999999
No 152
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.69 E-value=4.1e-08 Score=73.29 Aligned_cols=57 Identities=23% Similarity=0.201 Sum_probs=51.2
Q ss_pred CcceEEEEeCC--CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 114 VNNGITLKMND--EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 114 epLGiTIk~~e--~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.++|+++..+. ...++|..|.+|++|++.| |+.||+|++|||+.+.+.++.++..++
T Consensus 18 ~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~ 76 (94)
T 2eeg_A 18 SPWGFRLVGGRDFSAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRI 76 (94)
T ss_dssp SCCSCCEECCTTTTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHH
T ss_pred CccCEEEECccCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999998754 3469999999999999987 999999999999999998889988887
No 153
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.69 E-value=5.9e-08 Score=80.29 Aligned_cols=56 Identities=21% Similarity=0.276 Sum_probs=50.4
Q ss_pred CcceEEEEeCC----------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 114 VNNGITLKMND----------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 114 epLGiTIk~~e----------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+||++|.++. +.+++|++|..||+|++ .|+.||+|++|||+++.+.++.+++.++
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~--gl~~GD~I~~vng~~v~~~~~~~~~~~~ 67 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK--LLQPGDKIIQANGYSFINIEHGQAVSLL 67 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT--TCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh--CCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 56999999753 24799999999999999 5999999999999999999999999988
No 154
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.68 E-value=3.8e-08 Score=79.68 Aligned_cols=71 Identities=18% Similarity=0.208 Sum_probs=57.8
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCC--------------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeec
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMND--------------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPV 159 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e--------------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V 159 (255)
.+.|+|.|... .....||+++..+. ..+++|.+|..||+|++.| |+.||+|++|||+.+
T Consensus 24 ~~~v~l~~~~~------~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v 96 (139)
T 2vz5_A 24 VQRVEIHKLRQ------GENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDM 96 (139)
T ss_dssp EEEEEEECEEE------TTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEEC
T ss_pred eEEEEEEEcCC------CCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEc
Confidence 46777777530 00136999997532 2479999999999999988 999999999999999
Q ss_pred cCCCHHHHHhhc
Q psy337 160 GNQSVNALQKIL 171 (255)
Q Consensus 160 ~g~~~eel~~iL 171 (255)
.+.+++++.++|
T Consensus 97 ~~~~~~~~~~~l 108 (139)
T 2vz5_A 97 TMVTHDQARKRL 108 (139)
T ss_dssp TTCCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 999999999999
No 155
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=2e-08 Score=79.37 Aligned_cols=69 Identities=22% Similarity=0.342 Sum_probs=59.3
Q ss_pred ccceeeeeecCCCccccccCCC--cceEEEEeCC-C--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPV--NNGITLKMND-E--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNAL 167 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~e--pLGiTIk~~e-~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel 167 (255)
..+.+.|.|.. .. ++|+++.... . ..++|++|.+||+|++.| |+.||+|++|||+.+...+++++
T Consensus 15 ~~~~v~l~k~~---------~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~ 84 (114)
T 2d8i_A 15 VTQSIHIEKSD---------TAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSML 84 (114)
T ss_dssp EEEEEEEECSC---------TTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHH
T ss_pred ceEEEEEEeCC---------CCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHH
Confidence 46889999976 33 6999987522 2 369999999999999988 99999999999999999888999
Q ss_pred Hhhc
Q psy337 168 QKIL 171 (255)
Q Consensus 168 ~~iL 171 (255)
.++|
T Consensus 85 ~~~l 88 (114)
T 2d8i_A 85 KDFL 88 (114)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9999
No 156
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.65 E-value=5.4e-08 Score=73.80 Aligned_cols=58 Identities=19% Similarity=0.337 Sum_probs=51.4
Q ss_pred CCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+.++|+++..+.+ .+++|.+|..||+|++.| |+.||+|++|||+++.+.++.++..++
T Consensus 14 ~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~ 73 (103)
T 1wf7_A 14 PAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKI 73 (103)
T ss_dssp SSCCSCCEEEETTTTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHH
T ss_pred CCccCEEEeccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3789999987543 358999999999999988 999999999999999999889988887
No 157
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.64 E-value=7.5e-08 Score=96.14 Aligned_cols=71 Identities=17% Similarity=0.222 Sum_probs=63.2
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
..+.|.|.|.. .+||++|.++. +.+++|++|..||+|++.|.|++||+|++|||++|.+.+++
T Consensus 59 ~~~~v~l~k~~----------~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~ 128 (721)
T 2xkx_A 59 EYEEITLERGN----------SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHS 128 (721)
T ss_pred eEEEEEEEeCC----------CCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHH
Confidence 35789999986 79999999753 24699999999999999999999999999999999999999
Q ss_pred HHHhhcCC
Q psy337 166 ALQKILTP 173 (255)
Q Consensus 166 el~~iLtp 173 (255)
+++.+|..
T Consensus 129 ~~~~~l~~ 136 (721)
T 2xkx_A 129 AAVEALKE 136 (721)
T ss_pred HHHHHhhc
Confidence 99999953
No 158
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.64 E-value=1.4e-07 Score=76.95 Aligned_cols=68 Identities=19% Similarity=0.165 Sum_probs=58.4
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..|.|.+.|.. ...||+++... +.+++|+.+.+||+|++.| |+.||+|++|||+.+.+.+.+....++
T Consensus 4 ~~r~v~l~k~~---------~~~lG~~~~~~-~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~ 71 (166)
T 1w9e_A 4 DPREVILCKDQ---------DGKIGLRLKSI-DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVL 71 (166)
T ss_dssp CCEEEEEECCT---------TSCCSEEEEEE-TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEEeCC---------CCcEeEEEEeC-CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 36889999976 57899999874 4579999999999999987 999999999999999999865666666
No 159
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.62 E-value=4e-08 Score=85.71 Aligned_cols=68 Identities=12% Similarity=0.182 Sum_probs=60.9
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC-CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE-GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~-g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..|.|.+.|.. .++|+++..+.+ .+++|..|..||+|++.| |+.||+|++|||+.|.+.++++++++|
T Consensus 9 ~~r~v~l~k~~----------~glG~~l~~~~~~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l 77 (216)
T 2krg_A 9 RPRLCTMKKGP----------SGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAI 77 (216)
T ss_dssp CCEEEEEECCS----------SSSCEEECCCSSSCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHH
T ss_pred ceEEEEEEeCC----------CCceEEEEecCCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46889999986 789999987543 379999999999999988 999999999999999999999999888
No 160
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=3e-08 Score=74.79 Aligned_cols=65 Identities=22% Similarity=0.302 Sum_probs=56.3
Q ss_pred cceeeeeecCCCccccccCCC-cceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPV-NNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~e-pLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+.|.|.|.. .. ++|+++.. ..+++|.+|.+||+|+ +.|+.||+|++|||++|.+.++.++..++
T Consensus 9 ~~~v~l~~~~---------~~~~~G~~l~~--~~~~~V~~V~~~spA~--agL~~GD~Il~ing~~v~~~~~~~~~~~~ 74 (96)
T 2edv_A 9 RHTVKIDKDT---------LLQDYGFHISE--SLPLTVVAVTAGGSAH--GKLFPGDQILQMNNEPAEDLSWERAVDIL 74 (96)
T ss_dssp EEEEEECCCS---------SSCSCSBCCCS--SSSCBCCCBCSSSSST--TTSCTTCBEEEESSCBSTTCCHHHHHHHH
T ss_pred cEEEEEEECC---------CCCcccEEEec--CCCeEEEEECCCCchh--hCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4678888875 33 78999875 3579999999999994 89999999999999999999999999888
No 161
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.57 E-value=4.3e-08 Score=74.51 Aligned_cols=58 Identities=22% Similarity=0.283 Sum_probs=51.8
Q ss_pred CCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..++|+++..+.+ ..++|.+|.+|++|++.| |+.||+|++|||+.+.+.+++++.++|
T Consensus 14 ~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 73 (103)
T 1v5l_A 14 PAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRI 73 (103)
T ss_dssp SSCCSBCCEEETTTTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHH
T ss_pred CCCcCEEEeccccCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3689999986543 369999999999999966 999999999999999999999999999
No 162
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.56 E-value=2.1e-07 Score=73.10 Aligned_cols=69 Identities=17% Similarity=0.167 Sum_probs=56.6
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCCC----CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMNDE----GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQ 168 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~----g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~ 168 (255)
..+.+.+.|.. ....||+++..... ..++|.+|..||+|++.|.|+.||+|++|||+.|. +++++.
T Consensus 19 ~~~~~~~~~~~--------~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~ 88 (124)
T 1wh1_A 19 ELEEVDLYRMN--------SQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAV 88 (124)
T ss_dssp EECCBCCCCSS--------TTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHH
T ss_pred eEEEEEEEecC--------CCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHH
Confidence 44566666654 02479999986542 57999999999999998889999999999999997 579999
Q ss_pred hhc
Q psy337 169 KIL 171 (255)
Q Consensus 169 ~iL 171 (255)
++|
T Consensus 89 ~~l 91 (124)
T 1wh1_A 89 ALL 91 (124)
T ss_dssp HHH
T ss_pred HHH
Confidence 999
No 163
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.53 E-value=3.4e-07 Score=76.27 Aligned_cols=59 Identities=19% Similarity=0.333 Sum_probs=52.9
Q ss_pred CCcceEEEEeCC------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMND------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
...+|+++..+. ..+++|.+|..||+|++.|.|+.||+|++|||+.+.+.+++++.++|
T Consensus 116 ~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 180 (200)
T 2qt5_A 116 GNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSIL 180 (200)
T ss_dssp TTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 377999987542 23689999999999999998999999999999999999999999999
No 164
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.52 E-value=3.5e-07 Score=71.92 Aligned_cols=67 Identities=21% Similarity=0.244 Sum_probs=55.8
Q ss_pred ceeeeeecCCCccccccCCCcceEEEEeCCC--CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 95 PISRFQMSYPGTFLHSRFPVNNGITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 95 RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~--g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+.+.+.... ...||+++..... .+++|.+|..||+|++.| |+.||+|++|||+.+.+.+++++.+++
T Consensus 22 ~~v~v~~~~---------~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~ 90 (128)
T 1uf1_A 22 KKVNLVLGD---------GRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLL 90 (128)
T ss_dssp EEEEEECCS---------SCCCCEEEECCTTTTCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred EEEEEEECC---------CCccCEEEECcccCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 455555544 3679999987442 369999999999999987 899999999999999999888888888
No 165
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.50 E-value=3.2e-07 Score=69.40 Aligned_cols=64 Identities=25% Similarity=0.116 Sum_probs=54.2
Q ss_pred cceeeeeecCCCccccccCCCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 94 SPISRFQMSYPGTFLHSRFPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 94 ~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
...+.+.|.. .++|+++.... ..++|.++..+ + ..+.|+.||.|++|||++|.+.++++++++|
T Consensus 11 ~~~v~l~~~~----------~g~G~~i~~~~-~Gv~V~~v~~~--a-~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l 74 (96)
T 1ujv_A 11 LMTLTIVKGA----------QGFGFTIADSP-TGQRVKQILDI--Q-GCPGLCEGDLIVEINQQNVQNLSHTEVVDIL 74 (96)
T ss_dssp CEEEEEECCS----------SSSSEEEEEET-TEEEEEEESCG--G-GSTTCCSSCEEEEETTEECSSCCHHHHHHHH
T ss_pred EEEEEEEeCC----------CceeEEEEcCC-CCEEEEEEecc--c-ccCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4557888876 89999998543 35999999984 4 4588999999999999999999999999999
No 166
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.40 E-value=9.1e-07 Score=73.80 Aligned_cols=59 Identities=29% Similarity=0.484 Sum_probs=52.6
Q ss_pred CCcceEEEEeCC----CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMND----EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e----~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
...||+++.... ..+++|.+|..||+|++.|.|+.||.|++|||+++.+.+++++.++|
T Consensus 118 ~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 180 (196)
T 1p1d_A 118 SVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQIL 180 (196)
T ss_dssp SCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHH
T ss_pred CCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 457899998642 24699999999999999998999999999999999998899999999
No 167
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.24 E-value=1.5e-06 Score=68.75 Aligned_cols=69 Identities=22% Similarity=0.341 Sum_probs=54.0
Q ss_pred ccceeeeeecCCCccccccCCCcceEEEEeCC-----CCcEEEEEeec--cchhhhhcccCCCCeEEeECCeeccCCCHH
Q psy337 93 FSPISRFQMSYPGTFLHSRFPVNNGITLKMND-----EGKCIVARIMH--GGMIHRQATLHVGDEIKEINGIPVGNQSVN 165 (255)
Q Consensus 93 ~~RiV~l~K~~~~~~~~s~~~epLGiTIk~~e-----~g~IvIaRIl~--GG~AdRsGlLhvGDeIlEVNGi~V~g~~~e 165 (255)
+++++.+.+.. ...+|+++.... ...++|..|.. |++|++.| |+.||+|++|||+.+...+++
T Consensus 15 ~v~l~~~~~~~---------~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~ 84 (118)
T 2yub_A 15 SVTLISMPATT---------ECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVE 84 (118)
T ss_dssp EEEEEEECSCS---------SSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHH
T ss_pred eeEEeccCCcc---------CCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHH
Confidence 45666665554 345666665432 24699999999 99999965 799999999999999998889
Q ss_pred HHHhhc
Q psy337 166 ALQKIL 171 (255)
Q Consensus 166 el~~iL 171 (255)
++.++|
T Consensus 85 dl~~~l 90 (118)
T 2yub_A 85 EVEDAI 90 (118)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999998
No 168
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.20 E-value=1.9e-07 Score=87.12 Aligned_cols=52 Identities=29% Similarity=0.491 Sum_probs=0.0
Q ss_pred CcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 114 VNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 114 epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..||+++.. -+|..|..||+|++.| |++||+|++|||++|.+.++++++++|
T Consensus 308 ~~lG~~i~~-----g~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l 359 (388)
T 3suz_A 308 YQLGFSVQN-----GIICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQAL 359 (388)
T ss_dssp ----------------------------------------------------------
T ss_pred CccceEEec-----CEEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 457887763 2899999999999988 999999999999999999999999999
No 169
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.17 E-value=4.3e-06 Score=66.11 Aligned_cols=56 Identities=23% Similarity=0.328 Sum_probs=50.0
Q ss_pred CcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 114 VNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 114 epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+.|+.+... ++..+|+.+..|++|++ ..|+.||+|++|||..|...+.+|++.++
T Consensus 28 ~g~G~~l~~~-~~~~~I~~V~~gSpA~~-AGL~~GD~I~~Ing~~v~~~s~~dv~~~i 83 (101)
T 3qik_A 28 EDYGFDIEEK-NKAVVVKSVQRGSLAEV-AGLQVGRKIYSINEDLVFLRPFSEVESIL 83 (101)
T ss_dssp SSSSEEEEEE-TTEEEEEEECTTSHHHH-HTCCTTCBEEEETTEESTTSCHHHHHHHH
T ss_pred CcccEEEEcc-CCCeEEEEECCCCHHHH-cCCCCCCEEEEECCEEcCcCCHHHHHHHH
Confidence 7789998863 45789999999999999 56789999999999999888999999988
No 170
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.99 E-value=3.1e-05 Score=62.95 Aligned_cols=53 Identities=26% Similarity=0.330 Sum_probs=45.4
Q ss_pred CCcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
...||+++. .+ +|..+..||+|++.| |+.||.|++|||+++.+...+++...+
T Consensus 99 ~~~lG~~~~---~g--~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v 151 (166)
T 1w9e_A 99 TGHVGFIFK---NG--KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADIL 151 (166)
T ss_dssp TSCCSEEEE---TT--EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCcEeEEEe---CC--EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHH
Confidence 466898887 23 899999999999988 899999999999999999887776555
No 171
>1y74_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity, transport protein; NMR {Mus musculus} SCOP: a.194.1.1 PDB: 1zl8_B
Probab=97.83 E-value=3.4e-06 Score=58.23 Aligned_cols=31 Identities=35% Similarity=0.433 Sum_probs=24.6
Q ss_pred ccchhcccccCCchhhHHhhhhhhhHHHhhhC
Q psy337 32 PGWRHLWPCLAGGQLDLAVLQAHDVVAQEIYG 63 (255)
Q Consensus 32 ~~~~~~~~~~~~~~~~qaLL~aHD~VA~k~y~ 63 (255)
+-.+.|. +++..||+||||++||+||+|+|+
T Consensus 19 ~~~~EL~-~lL~~PHfqaLl~ahD~Va~~~y~ 49 (50)
T 1y74_B 19 NDAKELK-RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHH-HHHcCHHHHHHHHHHHHHHHHHhc
Confidence 3344555 445669999999999999999996
No 172
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.75 E-value=7.6e-05 Score=57.02 Aligned_cols=43 Identities=21% Similarity=0.339 Sum_probs=38.9
Q ss_pred CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 126 GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 126 g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
++++|.++..||+|++.| |..||.|++|||+.+. +.+++..+|
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l 77 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAV 77 (113)
T ss_dssp SCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHH
Confidence 569999999999999976 8999999999999997 568898888
No 173
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.65 E-value=9e-05 Score=68.53 Aligned_cols=57 Identities=19% Similarity=0.359 Sum_probs=50.8
Q ss_pred CcceEEEEeC-C-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 114 VNNGITLKMN-D-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 114 epLGiTIk~~-e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.++|+.+... . ++.++|..++.||+|++.| |+.||+|++|||+++.+.+.+++.++|
T Consensus 85 ~giG~~~~~~~~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l 143 (388)
T 1fc6_A 85 TGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLL 143 (388)
T ss_dssp BBCSEEEEECTTCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEEEEeecCCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4689998864 2 4679999999999999977 899999999999999999889999888
No 174
>3lra_A Disks large homolog 1, maguk P55 subfamily member protein LIN-7 homolog C; tripartite complex, L27 tetramer, cell junction; 2.95A {Homo sapiens} PDB: 1rso_A
Probab=97.63 E-value=5.3e-07 Score=81.63 Aligned_cols=85 Identities=21% Similarity=0.083 Sum_probs=53.4
Q ss_pred ccchhHHHHHHHhcccccccCCcceeeeccccch----------------hcccccCCchhhHHhhhhhhhHHHhhhCcc
Q psy337 2 VLQAHDVVAQEIYGEEAVRVTPPWLTVLALPGWR----------------HLWPCLAGGQLDLAVLQAHDVVAQEIYGEE 65 (255)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~qaLL~aHD~VA~k~y~~~ 65 (255)
.+++||++.+.-- -.|.++..-|..+++ .|. .++..||+||||+|||+||+++|+|.
T Consensus 114 Llkihd~L~~~~~------~~~~Pv~~~A~~La~EVle~L~~~~~s~ea~EL~-~LLs~PHfQALL~AHD~VAqk~yep~ 186 (254)
T 3lra_A 114 LVKIHEKLHYYEK------QSPVPILHGAAALADDLAEELQNKPLNSEIRELL-KLLSKPNVKALLSVHDTVAQKNYDLE 186 (254)
T ss_dssp HHHHHHHHHHHHT------TCCCCSCSCHHHHHHHHHHHHHTSCCCHHHHHHH-HHTTSHHHHHHHHHHHHHHTTCCCHH
T ss_pred HHHHHHHHHhccC------CCCCCCchhHHHHHHHHHHHHhhcCCChHHHHHH-HHhcCHHHHHHHHHHHHHHHhhcCcc
Confidence 4678998876531 345566555555443 232 23566999999999999999999963
Q ss_pred ccccCCCCCCCCCCCccccccccccCcccceeeeeecC
Q psy337 66 AVRVTPPPIHPYLNGFKFTRGTLLKKIFSPISRFQMSY 103 (255)
Q Consensus 66 ~~~~~ppp~~p~~~~~~~~~~~~~~~~~~RiV~l~K~~ 103 (255)
++||+ |.+++. .. .+++.+|+|+|+|+.
T Consensus 187 ---~lp~~--P~~p~~----~~-~~~DavRiV~LvK~~ 214 (254)
T 3lra_A 187 ---VLFQG--PALGEP----VR-LERDICRAIELLEKL 214 (254)
T ss_dssp ---HHHTH--HHHCSH----HH-HHHHHHHHHHHHHHH
T ss_pred ---ccCCC--CCCCCC----CC-CchhHHHhhhhhhcc
Confidence 01211 211111 11 234578999999987
No 175
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.56 E-value=3.2e-05 Score=58.14 Aligned_cols=42 Identities=19% Similarity=0.320 Sum_probs=37.7
Q ss_pred CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 126 GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 126 g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+++|++|..||+|++ | |+.||+|++|||+.+.. .+++..+|
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l 46 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYV 46 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHH
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHH
Confidence 4699999999999998 6 99999999999999974 58888888
No 176
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=97.45 E-value=2.2e-05 Score=59.20 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=36.9
Q ss_pred cEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 127 KCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 127 ~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+++|.+|..||+|++ | |+.||+|++|||+.+.. .+++..+|
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l 42 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYI 42 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHH
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHH
Confidence 477889999999999 7 99999999999999974 58999888
No 177
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=97.33 E-value=0.00031 Score=56.04 Aligned_cols=42 Identities=19% Similarity=0.210 Sum_probs=37.3
Q ss_pred CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 126 GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 126 g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+++|..+..||+|+ +.|+.||+|++|||+.+.. .+++..+|
T Consensus 57 ~g~~V~~V~~~spA~--aGL~~GD~I~~inG~~v~~--~~~l~~~l 98 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN--GHLEKYDVITKVDDKEIAS--STDLQSAL 98 (134)
T ss_dssp SCEEEEECSTTSGGG--TTSCSSCEEEEETTEECCC--HHHHHHHH
T ss_pred CCEEEEEECCCCchH--HCCCCCCEEEEECCEEcCC--HHHHHHHH
Confidence 468999999999999 6799999999999999974 57888877
No 178
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=97.32 E-value=0.00033 Score=52.91 Aligned_cols=43 Identities=23% Similarity=0.257 Sum_probs=37.9
Q ss_pred CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 125 EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 125 ~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..+++|..+..|++|++ .|+.||+|++|||+.+. +.+++.++|
T Consensus 6 ~~Gv~V~~V~~~spA~~--GL~~GD~I~~Ing~~v~--~~~dl~~~l 48 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD--VLHAGDLITEIDGNAFK--SSQEFIDYI 48 (100)
T ss_dssp CCCEEEEEECTTSGGGG--TCCTTCEEEEETTBCCS--SHHHHHHHH
T ss_pred CCCEEEEEeCCCCchHH--CCCCCCEEEEECCEECC--CHHHHHHHH
Confidence 34799999999999994 79999999999999997 458888888
No 179
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.29 E-value=0.00038 Score=53.13 Aligned_cols=43 Identities=23% Similarity=0.343 Sum_probs=38.0
Q ss_pred CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 126 GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 126 g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+++|.++..|++|++.| |+.||+|++|||+.+. +.+++..+|
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l 77 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLV--DSSELQEAV 77 (112)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHH
T ss_pred CCeEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHH
Confidence 469999999999999965 8999999999999997 468888777
No 180
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.24 E-value=0.0002 Score=52.34 Aligned_cols=41 Identities=15% Similarity=0.327 Sum_probs=36.3
Q ss_pred EEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 128 CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 128 IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
++|+++..|++|++.| |+.||+|++|||+.+. +.+++..+|
T Consensus 6 ~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l 46 (91)
T 2zpm_A 6 PVLENVQPNSAASXAG-LQAGDRIVXVDGQPLT--QWVTFVMLV 46 (91)
T ss_dssp CBCSEECTTSHHHHTT-CCTTCEEEEETTEECC--CHHHHHHHH
T ss_pred eEEEEECCCChHHhcC-CCCCCEEEEECCeEcC--CHHHHHHHH
Confidence 5788999999999965 9999999999999997 468888888
No 181
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.13 E-value=0.0025 Score=62.93 Aligned_cols=53 Identities=25% Similarity=0.314 Sum_probs=44.5
Q ss_pred CcceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 114 VNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 114 epLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..||+++..+ .++++|..|..||+|++. .|..||+|++|||+.|. .+++.++|
T Consensus 485 ~~lG~~~~~~-~~gv~V~~V~~~spA~~A-GL~~GD~I~aInG~~v~---~~~l~~~l 537 (597)
T 4fgm_A 485 VNFGAKYKAS-PQGLDVLNVYHDESAYHA-GLSAGDKIIAIDHLQAT---EQSVKRIL 537 (597)
T ss_dssp CCCSEEEEEE-TTEEEEEEECTTSHHHHH-TCCTTCEEEEETTEECC---TTTHHHHH
T ss_pred cccceEEecc-CCeEEEEEeCCCChHHHC-CCCCCCEEEEECCEECC---HHHHHHHH
Confidence 3699998864 357999999999999995 58999999999999994 36677777
No 182
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.11 E-value=0.00061 Score=54.29 Aligned_cols=43 Identities=21% Similarity=0.368 Sum_probs=38.4
Q ss_pred CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 125 EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 125 ~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..+++|.++..|++|++. |+.||+|++|||+.+. +.+++..+|
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~--~~~dl~~~l 66 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTS--NLTTYSAAL 66 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECS--SHHHHHHHH
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEECCEEcC--CHHHHHHHH
Confidence 357999999999999996 9999999999999997 458888888
No 183
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.00 E-value=0.0013 Score=48.35 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=32.3
Q ss_pred EEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 128 CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 128 IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+.|..+-.+++|++. .|+.||+|.+|||+.|. +.+++.+++
T Consensus 21 ~~V~~~~~~s~A~~a-Gl~~GD~I~~ing~~v~--~~~d~~~~~ 61 (87)
T 2i6v_A 21 YRVSPGKDPVLFESI-GLQDGDMAVALNGLDLT--DPNVMNTLF 61 (87)
T ss_dssp EEEEECSCHHHHHHT-TCCTTCEEEEETTEETT--CHHHHHHHH
T ss_pred EEEEeCCCCCHHHHC-CCCCCCEEEEECCEECC--CHHHHHHHH
Confidence 445555666677885 59999999999999997 458888777
No 184
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=96.92 E-value=0.00099 Score=50.09 Aligned_cols=41 Identities=22% Similarity=0.365 Sum_probs=35.7
Q ss_pred EEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 128 CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 128 IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
-+|..|..|++|++. .|+.||+|.+|||+.+. +.+++...|
T Consensus 4 p~V~~V~~~spA~~a-Gl~~GD~I~~ing~~v~--~~~d~~~~l 44 (95)
T 3id1_A 4 PVVGEIAANSIAAEA-QIAPGTELKAVDGIETP--DWDAVRLQL 44 (95)
T ss_dssp CBEEEECTTSHHHHT-TCCTTCEEEEETTEECS--SHHHHHHHH
T ss_pred CEEEeeCCCCHHHHc-CCCCCCEEEEECCEECC--CHHHHHHHH
Confidence 368899999999984 58999999999999997 458888877
No 185
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=96.90 E-value=0.0013 Score=62.16 Aligned_cols=55 Identities=16% Similarity=0.196 Sum_probs=44.9
Q ss_pred CCcceEEEEeCCCC----cEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 113 PVNNGITLKMNDEG----KCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 113 ~epLGiTIk~~e~g----~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..+.|+++....++ .++|..++.||+|++.| |+.||+|++|||+.|.+.. +.+++
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l 131 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELL 131 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGT
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHh
Confidence 46788888765432 37899999999999977 9999999999999998874 55556
No 186
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=96.89 E-value=0.0012 Score=59.15 Aligned_cols=54 Identities=13% Similarity=0.299 Sum_probs=45.4
Q ss_pred cceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 115 NNGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 115 pLGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.||+++...+ ...++|.++..|++|++. .|+.||+|++|||+.+.. .+++..+|
T Consensus 230 ~lGi~~~~~~~~~g~~V~~v~~~spA~~a-Gl~~GD~I~~ing~~v~~--~~~l~~~l 284 (324)
T 1y8t_A 230 SLGVQVTNDKDTLGAKIVEVVAGGAAANA-GVPKGVVVTKVDDRPINS--ADALVAAV 284 (324)
T ss_dssp ECCEEEESCSSSSSEEEEEECTTSTTTTT-TCCTTCEEEEETTEECCS--HHHHHHHH
T ss_pred ccceEeeeccCCCceEEEEECCCChHHHc-CCCCCCEEEEECCEECCC--HHHHHHHH
Confidence 4899987532 357999999999999995 589999999999999974 57888877
No 187
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=96.87 E-value=0.0017 Score=61.12 Aligned_cols=43 Identities=21% Similarity=0.312 Sum_probs=39.5
Q ss_pred CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 126 GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 126 g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+++|..|..|++|++.| |+.||.|++|||+.+. +.+++.++|
T Consensus 363 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~--~~~~~~~~l 405 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVN--SIAEMRKVL 405 (436)
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHH
Confidence 369999999999999987 9999999999999996 569999999
No 188
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=96.83 E-value=0.0029 Score=56.68 Aligned_cols=54 Identities=15% Similarity=0.109 Sum_probs=44.3
Q ss_pred cceEEEEeC-----------CCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 115 NNGITLKMN-----------DEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 115 pLGiTIk~~-----------e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
-||+++..- ....++|.++..|++|++. .|+.||+|++|||+.+.. .+++.++|
T Consensus 222 ~lGi~~~~~~~~~~~~~g~~~~~g~~V~~V~~~spA~~a-GL~~GD~I~~ing~~v~~--~~~l~~~l 286 (318)
T 1te0_A 222 YIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANA-GIQVNDLIISVDNKPAIS--ALETMDQV 286 (318)
T ss_dssp ECCEEEEECSCCCSSSSCSSSCCCEEEEEECTTSTTTTT-CCCTTCCEEEETTEECCC--HHHHHHHH
T ss_pred cceeEeeecchhHHHhccCCCCCcEEEEEeCCCChHHHC-CCCCCCEEEEECCEEcCC--HHHHHHHH
Confidence 378887641 1246999999999999984 588999999999999974 58888888
No 189
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=96.75 E-value=0.0016 Score=61.39 Aligned_cols=54 Identities=20% Similarity=0.316 Sum_probs=44.2
Q ss_pred cceEEEEeC-----------CCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 115 NNGITLKMN-----------DEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 115 pLGiTIk~~-----------e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
-||+++..- ...+++|+.|..||+|++.| |+.||+|++|||+.|.. .+++..+|
T Consensus 241 ~lGv~~~~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~--~~~l~~~l 305 (436)
T 4a8c_A 241 LLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNS--FAELRSRI 305 (436)
T ss_pred cCceEecccCHHHHHHhCCCCCcceEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHH
Confidence 478887531 12468999999999999977 99999999999999974 47888777
No 190
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=96.69 E-value=0.0045 Score=56.73 Aligned_cols=54 Identities=24% Similarity=0.330 Sum_probs=44.6
Q ss_pred cceEEEEeC-----------CCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 115 NNGITLKMN-----------DEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 115 pLGiTIk~~-----------e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
-||+++..- ...+++|..|..||+|++ +.|+.||+|++|||+.|. +.+++..+|
T Consensus 241 ~lGv~~~~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~-aGL~~GDvI~~ing~~v~--~~~~l~~~l 305 (345)
T 3stj_A 241 LLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAK-AGVKAGDIITSLNGKPLN--SFAELRSRI 305 (345)
T ss_dssp ECCEEEEECCHHHHHHTTCSCCSSEEEEEECTTSHHHH-HTCCTTCEECEETTEECS--CHHHHHHHH
T ss_pred ccceeeEeecHHHHHhcCCCCCceEEEEEeccCChHHH-cCCCCCCEEEEECCEECC--CHHHHHHHH
Confidence 388887642 124689999999999999 458899999999999997 568998888
No 191
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=96.65 E-value=0.0025 Score=60.46 Aligned_cols=54 Identities=17% Similarity=0.264 Sum_probs=45.1
Q ss_pred cceEEEEeCC-----------C-CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 115 NNGITLKMND-----------E-GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 115 pLGiTIk~~e-----------~-g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
-||+++..-. . .+++|+.|..||+|++.| |+.||+|++|||+.|.. .+++..++
T Consensus 259 ~lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~--~~~l~~~l 324 (451)
T 3pv2_A 259 LMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQ--ATQVKTTI 324 (451)
T ss_dssp BCCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHH
T ss_pred cccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCC--HHHHHHHH
Confidence 3899886421 1 469999999999999977 99999999999999974 58888887
No 192
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=96.57 E-value=0.0038 Score=59.24 Aligned_cols=42 Identities=29% Similarity=0.279 Sum_probs=39.0
Q ss_pred cEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 127 KCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 127 ~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+++|..+..||+|++.| |+.||.|++|||+.|. +.+++.++|
T Consensus 387 Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~--~~~~~~~~l 428 (451)
T 3pv2_A 387 GVQVVGASENSAGWRAG-IRPGDIIISANKKPVT--DVKSLQTIA 428 (451)
T ss_dssp EEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHT
T ss_pred ceEEEEECCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHH
Confidence 58999999999999987 9999999999999997 569999999
No 193
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=96.57 E-value=0.002 Score=54.56 Aligned_cols=54 Identities=13% Similarity=0.159 Sum_probs=43.4
Q ss_pred CcceEEEEeC-----CCCcEEEEEeeccchhhhhcccCC-CCeEEeECCeeccCCCHHHHHhhc
Q psy337 114 VNNGITLKMN-----DEGKCIVARIMHGGMIHRQATLHV-GDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 114 epLGiTIk~~-----e~g~IvIaRIl~GG~AdRsGlLhv-GDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..||++++.- ....++|..|..||+|++.| |+. ||.|++|||+ +. +.+++.++|
T Consensus 95 ~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~--~~~~l~~~l 154 (209)
T 3rle_A 95 GLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MN--ESEDLFSLI 154 (209)
T ss_dssp SSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CC--SSSCHHHHH
T ss_pred CccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eC--CHHHHHHHH
Confidence 4689998731 12468999999999999976 677 9999999997 64 558888888
No 194
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.44 E-value=0.0031 Score=63.45 Aligned_cols=54 Identities=24% Similarity=0.360 Sum_probs=46.0
Q ss_pred CcceEEEEeCCCCcEEEEEeecc--------chhhhhcc-cCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 114 VNNGITLKMNDEGKCIVARIMHG--------GMIHRQAT-LHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 114 epLGiTIk~~e~g~IvIaRIl~G--------G~AdRsGl-LhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
..+|+.+... ++.++|.+|+.| ++|++.|. |+ ||+|++|||+++.+.. ++..+|
T Consensus 737 ~g~G~~~~~~-~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~ 799 (1045)
T 1k32_A 737 GRIACDFKLD-GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVL 799 (1045)
T ss_dssp CBCSEEEEEE-TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHH
T ss_pred ceecEEEEEe-CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhh
Confidence 4799998864 467999999998 99999984 77 9999999999998874 677777
No 195
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=96.43 E-value=0.0062 Score=55.39 Aligned_cols=54 Identities=26% Similarity=0.368 Sum_probs=43.6
Q ss_pred ceEEEEeCCC------CcEEEEEeeccchhhhhcccC----------CCCeEEeECCeeccCCCHHHHHhhc
Q psy337 116 NGITLKMNDE------GKCIVARIMHGGMIHRQATLH----------VGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 116 LGiTIk~~e~------g~IvIaRIl~GG~AdRsGlLh----------vGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
||+++..... .+++|..+..||+|++.|+.. .||+|.+|||+.|... +++..+|
T Consensus 235 lGi~~~~~~~~~~~~~~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l 304 (348)
T 3qo6_A 235 LGIKFAPDQSVEQLGVSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRIL 304 (348)
T ss_dssp CCCEECCTTTTTTTTCSSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHH
T ss_pred cCcEEccchhhhhcCCceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHH
Confidence 7888754221 469999999999999976543 3999999999999855 8899888
No 196
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=96.33 E-value=0.0025 Score=53.96 Aligned_cols=37 Identities=27% Similarity=0.244 Sum_probs=32.8
Q ss_pred CcEEEEEeeccchhhhhcccCCC-CeEEeECCeeccCCC
Q psy337 126 GKCIVARIMHGGMIHRQATLHVG-DEIKEINGIPVGNQS 163 (255)
Q Consensus 126 g~IvIaRIl~GG~AdRsGlLhvG-DeIlEVNGi~V~g~~ 163 (255)
.+++|+.|..||+|++.| |+.| |+|++|||+.|....
T Consensus 16 ~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~ 53 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDN 53 (209)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSS
T ss_pred CEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHH
Confidence 368999999999999965 7898 999999999998664
No 197
>3uit_A INAD-like protein, maguk P55 subfamily member 5, LIN-7 homolog B; L27 domain, cell polarization, cell adhesion; 2.05A {Mus musculus} PDB: 1y76_A 1y76_B 1y74_A
Probab=96.26 E-value=0.00066 Score=61.82 Aligned_cols=58 Identities=24% Similarity=0.213 Sum_probs=38.8
Q ss_pred ccchhHHHHHHHhcccccccC-Ccceeeeccccch---------------hcccccCCchhhHHhhhhhhhHHHhhhCcc
Q psy337 2 VLQAHDVVAQEIYGEEAVRVT-PPWLTVLALPGWR---------------HLWPCLAGGQLDLAVLQAHDVVAQEIYGEE 65 (255)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------------~~~~~~~~~~~~qaLL~aHD~VA~k~y~~~ 65 (255)
.+++||++++.. ++ .. |.++..-|..+++ .|.. ++..||+||||+|||+||+++|+|.
T Consensus 120 LlKIHerL~~~~--e~---~~p~~PV~~nA~eLa~EVle~L~~~~s~ea~EL~~-LLs~PHfQALL~AHD~VAqK~yeP~ 193 (265)
T 3uit_A 120 AFKIHNAITVHM--NK---ASPPFPLISNAQDLAQEVQTVLKPVHHKEGQELTA-LLNTPHIQALLLAHDKVAEQEMGGG 193 (265)
T ss_dssp HHHHHHHHHHHH--SC---CSCCCCSCSCHHHHHHHHHHHHTTTCCHHHHHHHH-HHHSHHHHHHHHHHHHHHHSSSCCC
T ss_pred HHHHHHHHHHhc--cc---CCCCCCCcchHHHHHHHHHHHhhcCCChHHHHHHH-HHhCHHHHHHHHHHHHHHHHhccCC
Confidence 356888886532 11 23 5555555555543 3332 3456999999999999999999963
No 198
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=96.16 E-value=0.0087 Score=45.33 Aligned_cols=40 Identities=18% Similarity=0.262 Sum_probs=30.0
Q ss_pred EEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 129 IVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 129 vIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.|...-.+++|++. .|+.||.|++|||+.|... +++.+++
T Consensus 40 ~V~~~~pas~A~~a-Gl~~GDvI~~ing~~v~~~--~d~~~~~ 79 (105)
T 2i4s_A 40 RVSPGKDPVLFESI-GLQDGDMAVALNGLDLTDP--NVMNTLF 79 (105)
T ss_dssp EEEECSCTHHHHHH-TCCTTCEEEEETTEETTST--THHHHHH
T ss_pred EEecCCCCCHHHHc-CCCCCCEEEEECCEECCCH--HHHHHHH
Confidence 34444455566885 5999999999999999754 6777766
No 199
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=96.11 E-value=0.0076 Score=54.30 Aligned_cols=43 Identities=21% Similarity=0.326 Sum_probs=38.6
Q ss_pred CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 126 GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 126 g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+++|..+..|++|++. .|+.||+|++|||+.+. +.+++.++|
T Consensus 256 ~gv~V~~V~~~spA~~a-Gl~~GDvI~~ing~~v~--~~~~l~~~l 298 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRA-GLRPGDVILAIGEQMVQ--NAEDVYEAV 298 (325)
T ss_dssp SCEEEEEECTTSHHHHH-TCCTTCEEEEETTEECC--SHHHHHHHH
T ss_pred CCeEEEEeCcCChHHHC-CCCCCCEEEEECCEEcC--CHHHHHHHH
Confidence 46999999999999994 57899999999999997 568999998
No 200
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=95.46 E-value=0.0024 Score=60.54 Aligned_cols=53 Identities=23% Similarity=0.340 Sum_probs=0.0
Q ss_pred ceEEEEeCC-CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 116 NGITLKMND-EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 116 LGiTIk~~e-~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
+|+++..-+ ..+++|..|..|++|++.| |+.||.|++|||+.+. +.+++.++|
T Consensus 372 ~G~~l~~~~~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~--~~~~l~~~l 425 (448)
T 1ky9_A 372 EGAEMSNKGKDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVK--NIAELRKVL 425 (448)
T ss_dssp ---------------------------------------------------------
T ss_pred cceEeeccCCCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHH
Confidence 477764211 2468999999999999977 8999999999999997 468888888
No 201
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=94.97 E-value=0.0042 Score=55.94 Aligned_cols=43 Identities=21% Similarity=0.285 Sum_probs=0.0
Q ss_pred CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 126 GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 126 g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+++|..+..|++|++.| |+.||+|++|||+.+. +.+++.++|
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l 296 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVV--SANDVSDVI 296 (332)
T ss_dssp ----------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECC--CHHHHHHHH
Confidence 468899999999999955 8999999999999996 457888777
No 202
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=94.62 E-value=0.047 Score=53.62 Aligned_cols=45 Identities=22% Similarity=0.343 Sum_probs=37.9
Q ss_pred ceEEEEeCC------------CCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCC
Q psy337 116 NGITLKMND------------EGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQ 162 (255)
Q Consensus 116 LGiTIk~~e------------~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~ 162 (255)
||+++..-. ..+++|.+|..||+|++ | |+.||+|.+|||+.|...
T Consensus 255 LGv~~~~~~~~~~~~~~~l~~~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~ 311 (539)
T 4fln_A 255 LGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCE 311 (539)
T ss_dssp CCEEEEECCCHHHHHHHTCSSSBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSS
T ss_pred cceEEEecCCHHHHHhcCCCCcCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcC
Confidence 899886421 24799999999999987 6 999999999999999654
No 203
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=93.47 E-value=0.021 Score=54.05 Aligned_cols=43 Identities=23% Similarity=0.441 Sum_probs=38.3
Q ss_pred CcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 126 GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 126 g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+++|..|.+|++|++ +.|+.||+|++|||+.+... +++..+|
T Consensus 286 ~G~~V~~V~~gspA~~-AGL~~GDvI~~inG~~v~~~--~~l~~~l 328 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAK-AGIKAGDVITSLNGKPISSF--AALRAQV 328 (448)
T ss_dssp CSEECCCCTTCSSSTT-TTCCTTCEECBSSSSBCCSS--HHHHHHT
T ss_pred CceEEEEeccCCHHHH-cCCCCCCEEEEECCEEcCCH--HHHHHHH
Confidence 4689999999999999 57899999999999999865 7888887
No 204
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=89.82 E-value=0.36 Score=47.42 Aligned_cols=42 Identities=14% Similarity=0.335 Sum_probs=37.7
Q ss_pred cEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 127 KCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 127 ~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.++|+.|+.++++.+.| +..||+|.+|||+.|. +.+++.++|
T Consensus 416 gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~--s~~~l~~~l 457 (539)
T 4fln_A 416 IVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIR--NIHHLAHLI 457 (539)
T ss_dssp CEEEEEECCCGGGTTCS-SCCSEEEEEETTEECC--SHHHHHHHH
T ss_pred EEEEEEecCCchhhhcC-CCCCCEEEeECCEEcC--CHHHHHHHH
Confidence 58999999999999865 5689999999999997 569999999
No 205
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=67.55 E-value=6.2 Score=39.40 Aligned_cols=47 Identities=28% Similarity=0.447 Sum_probs=32.1
Q ss_pred cceEEEEeCCCCcEEEEEeeccchhhhhcccCCCCeEEeECCeeccCCCHHHHHhhc
Q psy337 115 NNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171 (255)
Q Consensus 115 pLGiTIk~~e~g~IvIaRIl~GG~AdRsGlLhvGDeIlEVNGi~V~g~~~eel~~iL 171 (255)
.+|+.++...+|.++|..+..... .+.+||+|++|||+++ .++.+-+
T Consensus 85 ~~Pf~vki~iDG~i~V~dv~~~~s-----~I~vGdEIlsING~pv-----~e~Lek~ 131 (583)
T 3dor_A 85 YLPYTVQKSSDGRFYFVDIMTFSS-----EIRVGDELLEVDGAPV-----QDVLATL 131 (583)
T ss_dssp ECSEEEEECTTSCEEEEEECSSCC-----SSCTTCEEEEETTEEH-----HHHHHTT
T ss_pred cCCeEEEEEECCcEEEEecccccc-----CCCCCCEEEEECCccH-----HHHHHHH
Confidence 456777733567888866632222 5889999999999976 4544444
No 206
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=44.62 E-value=31 Score=25.63 Aligned_cols=25 Identities=24% Similarity=0.376 Sum_probs=20.6
Q ss_pred CcceeEEEeeeecCCchhhcccCeEEEEEc
Q psy337 200 NVTRVRLVQFQKNTDEPMREARGSVTFKIV 229 (255)
Q Consensus 200 ~~~~vrlVq~~K~t~ePLG~~~g~vT~k~~ 229 (255)
..+.+|.|+++|...+.+| ++++-.
T Consensus 22 ~~~~~~~v~l~k~~~~~lG-----~~i~~~ 46 (113)
T 1va8_A 22 GGETVKIVRIEKARDIPLG-----ATVRNE 46 (113)
T ss_dssp TTEECEEEEEEECTTCCCC-----EEEEEC
T ss_pred CCCceEEEEEEeCCCCcee-----EEEEeC
Confidence 5568999999999999999 776543
No 207
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=40.44 E-value=16 Score=26.05 Aligned_cols=21 Identities=76% Similarity=1.113 Sum_probs=18.1
Q ss_pred eeEEEeeeecCCchhhcccCeEEEEE
Q psy337 203 RVRLVQFQKNTDEPMREARGSVTFKI 228 (255)
Q Consensus 203 ~vrlVq~~K~t~ePLG~~~g~vT~k~ 228 (255)
++|+|+++|..++++| ++++.
T Consensus 1 ~~r~V~l~K~~~~~lG-----~~i~~ 21 (88)
T 1kwa_A 1 RSRLVQFQKNTDEPMG-----ITLKM 21 (88)
T ss_dssp CCEEEEEEECSSSCCC-----EEEEC
T ss_pred CeEEEEEEeCCCCcee-----EEEEe
Confidence 4799999999999999 77765
No 208
>3uit_A INAD-like protein, maguk P55 subfamily member 5, LIN-7 homolog B; L27 domain, cell polarization, cell adhesion; 2.05A {Mus musculus} PDB: 1y76_A 1y76_B 1y74_A
Probab=20.31 E-value=18 Score=32.79 Aligned_cols=16 Identities=50% Similarity=0.628 Sum_probs=13.6
Q ss_pred CccchhHHHHHHHhcc
Q psy337 1 AVLQAHDVVAQEIYGE 16 (255)
Q Consensus 1 ~~~~~~~~~~~~~~~~ 16 (255)
|+|+|||.||+..|..
T Consensus 177 ALL~AHD~VAqK~yeP 192 (265)
T 3uit_A 177 ALLLAHDKVAEQEMGG 192 (265)
T ss_dssp HHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHHhccC
Confidence 4689999999999853
Done!