RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy337
(255 letters)
>d1kwaa_ b.36.1.1 (A:) Cask/Lin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 88
Score = 51.8 bits (124), Expect = 1e-09
Identities = 57/117 (48%), Positives = 62/117 (52%), Gaps = 46/117 (39%)
Query: 117 GITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKILTPPPI 176
GITLKMN+ CIVARIMHGGMIHRQ TLHVGDEI+EINGI V NQ+V LQK+L
Sbjct: 16 GITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKML----- 70
Query: 177 HPYLNGSDDPDDLDTPNGDIDIDNVTRVRLVQFQKNTDEPMREARGSVTFKIVPSYR 233
RE RGS+TFKIVPSYR
Sbjct: 71 -----------------------------------------REMRGSITFKIVPSYR 86
Score = 24.4 bits (53), Expect = 5.7
Identities = 14/15 (93%), Positives = 14/15 (93%)
Query: 203 RVRLVQFQKNTDEPM 217
R RLVQFQKNTDEPM
Sbjct: 1 RSRLVQFQKNTDEPM 15
>d1va8a1 b.36.1.1 (A:8-107) Maguk p55 subfamily member 5 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 100
Score = 44.1 bits (104), Expect = 8e-07
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 117 GITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G T++ + I++RI+ GG + LH GDE+ EINGI + + VN + +L
Sbjct: 33 GATVRNEMDS-VIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLL 86
>d1n7ea_ b.36.1.1 (A:) Glutamate receptor-interacting protein 1,
GRIP1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 95
Score = 43.3 bits (102), Expect = 1e-06
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 117 GITLKMNDE--GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
GIT+ +E I++ + GG+ R +H+GD I IN + + ++ +L
Sbjct: 17 GITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLL 73
>d1wifa_ b.36.1.1 (A:) hypothetical PDZ domain containing protein
Uqcrc2 (4930408O21Rik) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 126
Score = 42.7 bits (100), Expect = 4e-06
Identities = 9/55 (16%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 117 GITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G+ + N ++ +++ G L GD + + V ++ K+L
Sbjct: 41 GLVVIQNGPY-LQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLL 94
>d1ufxa_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 41.8 bits (98), Expect = 6e-06
Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Query: 117 GITL---KMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
GI + + + I GG H L VG I E+NG+ + + +I+
Sbjct: 20 GIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARII 77
>d1qava_ b.36.1.1 (A:) Syntrophin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 90
Score = 39.8 bits (93), Expect = 3e-05
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 117 GITLKMNDEGKC--IVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
GI++K E K ++++I G + L VGD I +NG + + + + + L
Sbjct: 19 GISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQAL 75
>d1p1da2 b.36.1.1 (A:115-213) Glutamate receptor interacting protein
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 99
Score = 39.9 bits (93), Expect = 3e-05
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 117 GITLKMNDEGK----CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
GIT+ K +++ I G + HR TL +GD++ I+ I + + S+ +IL
Sbjct: 25 GITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQIL 83
>d1x45a1 b.36.1.1 (A:8-92) Amyloid beta A4 precursor protein-binding
family A member 1 (APBA1, X11) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 85
Score = 39.1 bits (91), Expect = 3e-05
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 117 GITLKMNDEGKC----IVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G+ + + G I+A +MHGG + L++GD+I ING + ++ Q I+
Sbjct: 13 GVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSII 71
>d1v6ba_ b.36.1.1 (A:) Harmonin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 118
Score = 39.6 bits (92), Expect = 5e-05
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 117 GITL---KMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
+ L + GK +V+ + GG R + GDEI ING V + ++ + L
Sbjct: 31 DLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAAL 88
>d1ujda_ b.36.1.1 (A:) Hypothetical protein KIAA0559 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 38.8 bits (90), Expect = 9e-05
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 123 NDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
+ E +A+I+ GG + L G ++ E NGIP+ +++ +Q I+
Sbjct: 46 SGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSII 94
>d1wg6a_ b.36.1.1 (A:) Partitioning-defective 3-like protein, PAR3-L
(RIKEN cDNA 2810455b10) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 127
Score = 38.9 bits (90), Expect = 9e-05
Identities = 10/60 (16%), Positives = 25/60 (41%)
Query: 112 FPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
+ + + + + I+HGG + L + D++ +NG + +S + + L
Sbjct: 41 VSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETL 100
>d1wi4a1 b.36.1.1 (A:8-103) Syntaxin binding protein 4 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 96
Score = 38.0 bits (88), Expect = 1e-04
Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 117 GITL---KMNDEGKCI-VARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G+ + +EG + + ++ GG ++ L GD++ IN + S + I+
Sbjct: 21 GLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSII 79
>d2f5ya1 b.36.1.1 (A:19-95) Regulator of G-protein signaling 3, RGS3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 37.1 bits (86), Expect = 1e-04
Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 115 NNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKILTPP 174
+G + + V + GG R A L D + ++N PV + L +
Sbjct: 7 KDGFGFTICCDSPVRVQAVDSGGPAER-AGLQQLDTVLQLNERPVEHWKCVELAHEIRSC 65
Query: 175 P 175
P
Sbjct: 66 P 66
>d1wh1a_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 124
Score = 37.7 bits (87), Expect = 2e-04
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 117 GITLKMNDEGK----CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGN--QSVNALQK 169
G+T+ + + ++ I + + + GD I +INGI V N ++V L
Sbjct: 35 GLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTS 93
>d1rzxa_ b.36.1.1 (A:) GTPase-binding domain of the cell polarity
protein par6 (Par-6B) {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 98
Score = 36.9 bits (85), Expect = 3e-04
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 129 IVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKILTPPP 175
++R++ GG+ L V DE+ E+NGI V ++++ + ++
Sbjct: 41 FISRLVPGGLAESTGLLAVNDEVIEVNGIEVAGKTLDQVTDMMVANS 87
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein
cask {Human (Homo sapiens) [TaxId: 9606]}
Length = 50
Score = 35.6 bits (82), Expect = 3e-04
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 1 AVLQAHDVVAQEIYGE 16
A+LQ HDVVA E+Y +
Sbjct: 35 ALLQTHDVVAHEVYSD 50
Score = 35.6 bits (82), Expect = 3e-04
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 49 AVLQAHDVVAQEIYGE 64
A+LQ HDVVA E+Y +
Sbjct: 35 ALLQTHDVVAHEVYSD 50
>d1x5ra1 b.36.1.1 (A:8-106) Glutamate receptor interacting protein
2, GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 36.8 bits (85), Expect = 4e-04
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 117 GITLKMNDE------GKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKI 170
G+ L+ +V I R L VGD + INGI + ++ ++
Sbjct: 23 GLQLQGGIFATETLSSPPLVCFIEPDSPAERCGLLQVGDRVLSINGIATEDGTMEEANQL 82
Query: 171 L 171
L
Sbjct: 83 L 83
>d1ihja_ b.36.1.1 (A:) Inad {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 94
Score = 36.4 bits (84), Expect = 4e-04
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 128 CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
+ I+ H L VGD I +NG V N + A+ ++
Sbjct: 37 IFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLI 80
>d1g9oa_ b.36.1.1 (A:) Na+/H+ exchanger regulatory factor, NHERF
{Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 36.3 bits (84), Expect = 5e-04
Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 117 GITLKMNDEGKCI-VARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G L + + G + A L GD + E+NG V ++ + +
Sbjct: 17 GFHLHGEKGKLGQYIRLVEPGSPAEK-AGLLAGDRLVEVNGENVEKETHQQVVSRI 71
>d2f0aa1 b.36.1.1 (A:251-342) Segment polarity protein dishevelled
homolog Dvl-2 {African clawed frog (Xenopus laevis)
[TaxId: 8355]}
Length = 92
Score = 36.0 bits (83), Expect = 5e-04
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 117 GITLKMNDEGK----CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
GI++ + + IM GG + + GD + ++N I N S + ++L
Sbjct: 16 GISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVL 74
>d1tp5a1 b.36.1.1 (A:302-403) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 102
Score = 36.0 bits (83), Expect = 6e-04
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 117 GITLKMNDEGKCI-VARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G + ++G+ I ++ I+ GG L GD+I +NG+ + N S L
Sbjct: 23 GFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIAL 78
>d1qaua_ b.36.1.1 (A:) Neuronal nitric oxide synthase, NNOS {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 112
Score = 36.2 bits (83), Expect = 7e-04
Identities = 11/56 (19%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 117 GITLKMNDEGKCI-VARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G +K + ++ ++ GG + + GD I +N P+ + S ++ ++L
Sbjct: 16 GFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVL 71
>d2cs5a1 b.36.1.1 (A:8-113) Tyrosine-protein phosphatase
non-receptor type 4, PTPN4 {Human (Homo sapiens) [TaxId:
9606]}
Length = 106
Score = 35.7 bits (82), Expect = 0.001
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 117 GITLKMNDEGK--CIVARIMHGGMIHR-QATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G +K + K IV+R+ G L+ GD++ ING + + + + +
Sbjct: 23 GFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFI 80
>d1v62a_ b.36.1.1 (A:) Glutamate receptor interacting protein 2,
GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 35.8 bits (82), Expect = 0.001
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 117 GITL---KMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
GI+L + ++ + RI ++ R LH GD I I+G + + S+ K+L
Sbjct: 30 GISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLL 87
>d1vb7a_ b.36.1.1 (A:) PDZ-LIM protein mystique {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 94
Score = 34.9 bits (80), Expect = 0.002
Identities = 13/56 (23%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Query: 117 GITLKM-NDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G + D I+ + A L GD I ING N Q +
Sbjct: 19 GFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKI 74
>d1v5la_ b.36.1.1 (A:) Alpha-actinin-2 associated LIM protein {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 103
Score = 34.6 bits (79), Expect = 0.002
Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Query: 117 GITLKM-NDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKILTPPP 175
G L D + +V + G A L GD I I+G + + Q +
Sbjct: 18 GFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAAS 77
>d1v5qa_ b.36.1.1 (A:) Glutamate receptor interacting protein {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 122
Score = 35.0 bits (80), Expect = 0.002
Identities = 12/69 (17%), Positives = 24/69 (34%)
Query: 112 FPVNNGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
+ + +++ I R L +GD + INGIP + + ++L
Sbjct: 31 IQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLL 90
Query: 172 TPPPIHPYL 180
I +
Sbjct: 91 RDSSITSKV 99
>d1wf8a1 b.36.1.1 (A:8-101) Neurabin-i {Human (Homo sapiens) [TaxId:
9606]}
Length = 94
Score = 34.5 bits (79), Expect = 0.002
Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 8/67 (11%)
Query: 117 GITLKMNDEGK--------CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQ 168
GI++ G V + GG R + V D+I E++GI + + N
Sbjct: 16 GISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAA 75
Query: 169 KILTPPP 175
+L
Sbjct: 76 TVLRNTK 82
>d1t2ma1 b.36.1.1 (A:2-93) Afadin {Human (Homo sapiens) [TaxId:
9606]}
Length = 92
Score = 34.1 bits (78), Expect = 0.002
Identities = 8/43 (18%), Positives = 18/43 (41%)
Query: 129 IVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
V ++ GG L GD++ ++G + S +++
Sbjct: 34 YVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELM 76
>d2fcfa1 b.36.1.1 (A:1148-1243) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 34.1 bits (78), Expect = 0.002
Identities = 8/44 (18%), Positives = 19/44 (43%)
Query: 128 CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
+ ++ + TL GD I E++G+ + + S + +
Sbjct: 38 IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI 81
>d1m5za_ b.36.1.1 (A:) Glutamate receptor interacting protein {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 91
Score = 34.1 bits (78), Expect = 0.003
Identities = 8/60 (13%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Query: 117 GITLKMNDEGKCI-VARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKILTPPP 175
G ++ K + V I G L D + ++N + + + ++
Sbjct: 22 GFSVADGLLEKGVYVKNIRPAGPGDL-GGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESG 80
>d1y7na1 b.36.1.1 (A:12-90) Amyloid beta A4 precursor
protein-binding family A member 1 (APBA1, X11) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 32.8 bits (75), Expect = 0.005
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 129 IVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
I+ +M GG+ R + VG I EING V + IL
Sbjct: 23 IICSLMRGGIAER-GGVRVGHRIIEINGQSVVATPHEKIVHIL 64
>d1rgwa_ b.36.1.1 (A:) Zasp (Cypher, Oracle 1) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 85
Score = 33.3 bits (76), Expect = 0.005
Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 117 GITLKM-NDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G L+ D + + G Q+ L GD + I+G+ + Q +
Sbjct: 14 GFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKI 69
>d1x6da1 b.36.1.2 (A:8-114) Interleukin 16 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 107
Score = 32.6 bits (74), Expect = 0.010
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 117 GITL---KMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G +L + V R+ G+ ++ T+ G+E+ ING + + + IL
Sbjct: 23 GFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAIL 80
>d1uf1a_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 128
Score = 31.1 bits (70), Expect = 0.042
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 117 GITLKMNDEGK--CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G+T++ E + + G + L VGD+I E+NG N + ++L
Sbjct: 35 GLTIRGGAEYGLGIYITGVDPGSEAEG-SGLKVGDQILEVNGRSFLNILHDEAVRLL 90
>d1wf7a_ b.36.1.1 (A:) Enigma homolog ENH {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 103
Score = 30.4 bits (68), Expect = 0.063
Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 117 GITLK-MNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G L+ D + + G QA + +GD + I+GI + Q +
Sbjct: 18 GFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKI 73
>d1r6ja_ b.36.1.1 (A:) Syntenin 1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 82
Score = 29.2 bits (65), Expect = 0.11
Identities = 13/59 (22%), Positives = 18/59 (30%), Gaps = 6/59 (10%)
Query: 117 GITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKILTPPP 175
G K + I+ R L I EING V + + IL+
Sbjct: 19 GFIFKN-----GKITSIVKDSSAARNGLL-TEHNICEINGQNVIGLKDSQIADILSTSG 71
>d1um1a_ b.36.1.1 (A:) Hypothetical protein KIAA1849 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 29.9 bits (67), Expect = 0.11
Identities = 10/60 (16%), Positives = 19/60 (31%), Gaps = 5/60 (8%)
Query: 117 GITLKMNDEGK-----CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G+ L + ++ G L +GD I E+NG + ++
Sbjct: 22 GMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLI 81
>d1wi2a_ b.36.1.1 (A:) PDZ domain containing protein 11, Pdzk11
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 104
Score = 29.6 bits (66), Expect = 0.14
Identities = 10/57 (17%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 117 GITLKMNDEGK--CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G ++ + +++++ HR A L GD++ +N + + + +IL
Sbjct: 30 GFNIRGGKASQLGIFISKVIPDSDAHR-AGLQEGDQVLAVNDVDFQDIEHSKAVEIL 85
>d1rgra_ b.36.1.1 (A:) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 93
Score = 28.7 bits (64), Expect = 0.19
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 123 NDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
D+ + +I+ GG + L V D I +N + V + +A + L
Sbjct: 28 GDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEAL 76
>d1ueza_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 28.7 bits (64), Expect = 0.21
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 117 GITLKMNDEGK--CIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
G +++ E V+ + G + + L VGD+I +N + + K L
Sbjct: 24 GFSIRGGSEHGVGIYVSLVEPGSLAEK-EGLRVGDQILRVNDKSLARVTHAEAVKAL 79
>d1ujua_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 111
Score = 28.8 bits (64), Expect = 0.23
Identities = 8/49 (16%), Positives = 19/49 (38%)
Query: 123 NDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
+ ++++ G R L VG + E+N + + ++L
Sbjct: 41 PTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLL 89
>d2csja1 b.36.1.1 (A:8-111) Tight junction protein ZO-2, Tjp2 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 104
Score = 28.7 bits (64), Expect = 0.24
Identities = 10/49 (20%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 123 NDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKIL 171
N E +++ ++ GG L D + +NG P+ + + + L
Sbjct: 36 NGETSIVISDVLPGGP--ADGLLQENDRVVMVNGTPMEDVLHSFAVQQL 82
>d2h3la1 b.36.1.1 (A:1310-1412) Erbin {Human (Homo sapiens) [TaxId:
9606]}
Length = 103
Score = 28.7 bits (64), Expect = 0.27
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 116 NGITLKMNDEGKCIVARIMHGGMIHRQATLHVGDEIKEINGIPVGN----QSVNALQK 169
G + +D+G V R+ G + L GD+I + NG N Q+V+ L+
Sbjct: 34 RGNPFRPDDDG-IFVTRVQPEGPASKL--LQPGDKIIQANGYSFINIEHGQAVSLLKT 88
>d1lcya1 b.36.1.4 (A:226-325) Mitochondrial serine protease HtrA2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 100
Score = 28.0 bits (62), Expect = 0.47
Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 129 IVARIMHGGMIHRQATLHVGDEIKEINGIPVGNQSVNALQKILTP 173
++ +++ G H +A L GD I I V Q+ + + +
Sbjct: 34 LIHKVILGSPAH-RAGLRPGDVILAIGEQMV--QNAEDVYEAVRT 75
>d1k32a1 b.36.1.3 (A:763-853) Tricorn protease {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 91
Score = 26.9 bits (59), Expect = 0.77
Identities = 11/53 (20%), Positives = 17/53 (32%), Gaps = 9/53 (16%)
Query: 117 GITLKMNDEGKCIVARIMH--------GGMIHRQATLHVGDEIKEINGIPVGN 161
K+ D +VA+ I G I++I+G VG
Sbjct: 4 ACDFKL-DGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPTGYLIEDIDGETVGA 55
>d2i6va1 b.36.1.5 (A:219-305) General secretion pathway protein C,
EpsC {Vibrio cholerae [TaxId: 666]}
Length = 87
Score = 26.1 bits (57), Expect = 1.8
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 124 DEGKCIVARIMHG--GMIHRQATLHVGDEIKEINGIPV 159
+ K + R+ G ++ L GD +NG+ +
Sbjct: 14 RDDKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDL 51
>d3brda2 b.2.5.8 (A:197-380) DNA-binding protein LAG-1 (CSL)
{Caenorhabditis elegans [TaxId: 6239]}
Length = 184
Score = 26.5 bits (58), Expect = 2.8
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 45 QLDLAVLQAHDVVAQEIYGEEAVRVTPPPIHPYLNG 80
+ + + H VAQ+ YG E PPP YL G
Sbjct: 16 KYECVISIFHAKVAQKSYGNEKRFFCPPPC-IYLIG 50
>d3bqoa1 a.146.1.1 (A:62-265) TRF1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 204
Score = 25.9 bits (57), Expect = 3.8
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 73 PIHPYLNGFKFTRGTLLKKIFSPISRFQMSYPGTFL 108
H + F + +++KI S ++ TFL
Sbjct: 162 TFHSFFQHFSYN--HMMEKIKSYVNYVLSEKSSTFL 195
>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine
phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus
thermophilus [TaxId: 274]}
Length = 258
Score = 25.6 bits (55), Expect = 6.1
Identities = 13/51 (25%), Positives = 16/51 (31%), Gaps = 9/51 (17%)
Query: 42 AGGQLDLAVLQAHDV---------VAQEIYGEEAVRVTPPPIHPYLNGFKF 83
AG Q DL V V AQ G + V + PP +
Sbjct: 16 AGVQADLKVFFRFGVYGTSALTLVTAQNTLGVQRVHLLPPEVVYAQIESVA 66
>d2qapa1 c.1.10.1 (A:1-357) Fructose-1,6-bisphosphate aldolase
{Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Length = 357
Score = 25.4 bits (55), Expect = 7.1
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 106 TFLHSRFPVNNGITLKMNDEGKCIVARIMHGG 137
T L S+ P N + E V ++ G
Sbjct: 5 TVLQSQLPAYNRLKTPYESELIATVKKLTTPG 36
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis,
leukoagglutinin [TaxId: 37501]}
Length = 239
Score = 25.1 bits (54), Expect = 7.5
Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 4/83 (4%)
Query: 174 PPIHPYLNGSDDPDDLDTPNGDIDIDNVTRVRLVQFQKNTDEPM----REARGSVTFKIV 229
Y S DP D + + ID++ + ++ VQ+ + T
Sbjct: 126 VEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQWDWINGGVAFATITYLAPNKTLIAS 185
Query: 230 PSYRSAPPPCEVQIYPNLPKYVQ 252
Y S V +L + +
Sbjct: 186 LVYPSNQTTFSVAASVDLKEILP 208
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.139 0.431
Gapped
Lambda K H
0.267 0.0575 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,039,456
Number of extensions: 50331
Number of successful extensions: 165
Number of sequences better than 10.0: 1
Number of HSP's gapped: 165
Number of HSP's successfully gapped: 62
Length of query: 255
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 172
Effective length of database: 1,268,006
Effective search space: 218097032
Effective search space used: 218097032
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.2 bits)