Query psy3377
Match_columns 336
No_of_seqs 185 out of 1699
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 23:28:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3377.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3377hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qb0_A Actin-related protein 4 100.0 3.3E-63 1.1E-67 487.7 29.4 303 1-336 10-325 (498)
2 3dwl_A Actin-related protein 3 100.0 1E-60 3.5E-65 464.8 9.4 290 12-334 4-310 (427)
3 2fxu_A Alpha-actin-1, actin, a 100.0 1.2E-53 4.3E-58 409.6 17.8 275 10-333 2-276 (375)
4 1k8k_B ARP2, actin-like protei 100.0 5.2E-55 1.8E-59 421.8 2.7 278 10-334 3-281 (394)
5 4fo0_A Actin-related protein 8 100.0 6.3E-52 2.1E-56 419.7 17.1 279 13-326 15-370 (593)
6 1k8k_A ARP3, actin-like protei 100.0 4.2E-49 1.4E-53 383.2 17.9 281 12-333 4-298 (418)
7 4am6_A Actin-like protein ARP8 100.0 8.1E-48 2.8E-52 382.1 16.7 283 8-326 35-394 (655)
8 1jce_A ROD shape-determining p 99.9 2.2E-22 7.4E-27 190.0 22.2 181 14-222 4-193 (344)
9 3h1q_A Ethanolamine utilizatio 99.6 2.4E-14 8E-19 130.3 16.7 124 94-220 59-183 (272)
10 2v7y_A Chaperone protein DNAK; 99.5 7E-14 2.4E-18 138.6 12.9 177 14-222 3-212 (509)
11 3qfu_A 78 kDa glucose-regulate 99.5 1.9E-12 6.6E-17 123.6 18.6 96 125-221 152-256 (394)
12 3i33_A Heat shock-related 70 k 99.3 3.8E-11 1.3E-15 115.1 17.5 95 126-221 158-264 (404)
13 2fsj_A Hypothetical protein TA 99.3 1.5E-11 5.2E-16 116.0 12.9 197 9-222 17-240 (346)
14 1dkg_D Molecular chaperone DNA 99.3 5.4E-11 1.8E-15 113.3 15.1 114 106-222 114-243 (383)
15 4gni_A Putative heat shock pro 99.0 1.1E-08 3.8E-13 98.2 17.7 113 106-221 129-255 (409)
16 1yuw_A Heat shock cognate 71 k 99.0 3.5E-08 1.2E-12 98.6 19.3 93 127-220 140-242 (554)
17 2kho_A Heat shock protein 70; 98.9 4.2E-08 1.4E-12 99.0 16.3 95 126-221 135-242 (605)
18 3d2f_A Heat shock protein homo 98.8 9.7E-08 3.3E-12 97.5 15.1 93 127-220 139-246 (675)
19 3js6_A Uncharacterized PARM pr 98.6 8.7E-07 3E-11 83.6 16.9 198 14-222 5-232 (355)
20 4b9q_A Chaperone protein DNAK; 98.6 7.6E-07 2.6E-11 89.8 17.0 113 106-221 114-242 (605)
21 4apw_A ALP12; actin-like prote 98.5 4.8E-07 1.7E-11 84.4 10.7 189 12-221 6-219 (329)
22 2zgy_A Plasmid segregation pro 98.5 5.9E-07 2E-11 83.3 10.3 190 15-224 2-215 (320)
23 2ych_A Competence protein PILM 98.4 6.9E-06 2.4E-10 77.6 17.2 74 142-218 153-233 (377)
24 4a2a_A Cell division protein F 97.2 0.001 3.4E-08 63.9 9.2 80 138-220 166-250 (419)
25 1t6c_A Exopolyphosphatase; alp 96.4 0.027 9.2E-07 51.8 11.8 75 138-215 95-177 (315)
26 1u6z_A Exopolyphosphatase; alp 95.8 0.053 1.8E-06 53.3 11.2 73 140-215 96-176 (513)
27 3mdq_A Exopolyphosphatase; str 95.7 0.026 8.8E-07 51.9 8.1 73 140-215 89-170 (315)
28 3hi0_A Putative exopolyphospha 95.4 0.051 1.7E-06 53.3 9.2 72 140-214 100-178 (508)
29 3cer_A Possible exopolyphospha 95.0 0.028 9.7E-07 52.3 5.8 75 140-215 102-191 (343)
30 2d0o_A DIOL dehydratase-reacti 90.4 0.56 1.9E-05 46.0 7.2 57 162-220 390-451 (610)
31 1nbw_A Glycerol dehydratase re 90.2 0.56 1.9E-05 46.1 7.1 57 162-220 392-453 (607)
32 3cet_A Conserved archaeal prot 89.4 0.36 1.2E-05 44.4 4.8 26 174-199 127-152 (334)
33 2h3g_X Biosynthetic protein; p 83.2 19 0.00067 31.7 12.7 18 16-33 3-20 (268)
34 3djc_A Type III pantothenate k 78.5 34 0.0012 30.1 13.1 19 15-33 4-22 (266)
35 4fo0_A Actin-related protein 8 78.2 0.43 1.5E-05 47.3 0.0 33 291-323 409-441 (593)
36 3bex_A Type III pantothenate k 71.6 50 0.0017 28.6 13.0 27 173-200 121-147 (249)
37 3mcp_A Glucokinase; structural 66.8 79 0.0027 29.0 13.2 53 144-198 99-171 (366)
38 3aap_A Ectonucleoside triphosp 61.9 8.7 0.0003 35.5 4.9 100 105-208 52-176 (353)
39 2gup_A ROK family protein; sug 59.3 26 0.00089 30.7 7.6 53 144-199 86-143 (292)
40 1zbs_A Hypothetical protein PG 57.0 99 0.0034 26.9 14.1 68 129-197 63-132 (291)
41 2qm1_A Glucokinase; alpha-beta 46.0 62 0.0021 28.6 7.9 52 145-198 100-158 (326)
42 1zc6_A Probable N-acetylglucos 42.8 1.7E+02 0.0058 25.5 12.6 86 105-197 53-145 (305)
43 2aa4_A Mannac kinase, putative 42.5 78 0.0027 27.4 7.9 51 145-198 88-145 (289)
44 1djx_A PLC-D1, phosphoinositid 41.2 21 0.00072 35.6 4.2 45 105-155 235-279 (624)
45 3vgl_A Glucokinase; ROK family 40.3 84 0.0029 27.9 7.9 52 145-198 88-146 (321)
46 2zkm_X 1-phosphatidylinositol- 36.0 32 0.0011 35.4 4.7 45 105-155 385-430 (799)
47 1v31_A Hypothetical protein RA 34.8 37 0.0013 24.8 3.6 32 103-135 28-59 (93)
48 3r8e_A Hypothetical sugar kina 33.3 1.2E+02 0.0041 26.8 7.7 74 145-220 109-206 (321)
49 2ap1_A Putative regulator prot 33.3 1.2E+02 0.0041 26.8 7.7 53 145-199 112-171 (327)
50 1uhr_A SWI/SNF related, matrix 33.1 23 0.00079 25.9 2.2 31 105-136 30-60 (93)
51 3qr0_A Phospholipase C-beta (P 31.6 42 0.0014 34.6 4.7 45 105-155 394-438 (816)
52 2yhw_A Bifunctional UDP-N-acet 29.8 1.2E+02 0.004 27.1 7.0 50 147-198 125-181 (343)
53 1z05_A Transcriptional regulat 28.9 1.5E+02 0.005 27.5 7.7 52 145-198 200-258 (429)
54 3djc_A Type III pantothenate k 28.3 1.4E+02 0.0047 26.1 6.9 49 176-224 4-53 (266)
55 1z6r_A MLC protein; transcript 28.0 1.5E+02 0.0051 27.1 7.6 52 145-198 178-236 (406)
56 4db3_A Glcnac kinase, N-acetyl 27.6 1.5E+02 0.0051 26.3 7.3 53 145-199 112-171 (327)
57 1woq_A Inorganic polyphosphate 27.0 2.1E+02 0.0072 24.3 8.0 54 144-199 105-166 (267)
58 3cj1_A Ectonucleoside triphosp 25.5 74 0.0025 30.3 4.9 55 141-195 130-211 (456)
59 2e2o_A Hexokinase; acetate and 25.4 3.2E+02 0.011 23.4 12.6 61 128-195 62-123 (299)
60 3vov_A Glucokinase, hexokinase 23.7 2.3E+02 0.0079 24.7 7.7 53 145-199 90-149 (302)
61 4htl_A Beta-glucoside kinase; 23.6 2.4E+02 0.0081 24.5 7.7 52 145-198 89-147 (297)
62 2hoe_A N-acetylglucosamine kin 23.4 1.8E+02 0.006 26.4 7.1 52 145-198 180-236 (380)
63 2ch5_A NAGK protein; transfera 21.6 4.1E+02 0.014 23.2 11.2 89 105-196 49-143 (347)
No 1
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-63 Score=487.74 Aligned_cols=303 Identities=25% Similarity=0.458 Sum_probs=252.1
Q ss_pred CCC-CCCcccCCCCceEEEecCCceEEEeeeCCCCCeEEccCCceeecCCCccccCCCCCCCCCCCCCCcccCCCCceEe
Q psy3377 1 MSA-GGILYGGDEIGALVFDVGSQSLRVGYAQEDSPKAEIPAVVGVVEDGGQTASIDTPMDVDVKPDTNNVTASGNKYFI 79 (336)
Q Consensus 1 ~~~-~~~~~~~~~~~~vViD~Gs~~~kaG~age~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 79 (336)
||+ +..+||||++.+||||+||++|||||||++.|++++||+|++++... .++.++
T Consensus 10 ~~~~~~~~yggde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~-----------------------~~~~~v 66 (498)
T 3qb0_A 10 MSNAALQVYGGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE-----------------------GNKKIF 66 (498)
T ss_dssp ---------CCCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS-----------------------SCCEEC
T ss_pred hccchhcccCCCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC-----------------------CccEEE
Confidence 544 45599999999999999999999999999999999999999987532 146789
Q ss_pred cchhhhcccCCeEEeccccCCcccCHHHHHHHHHHHhhcccCCCCCCC-ceEEEeCCCCCHHHHHHHHHHHHhhcCCCeE
Q psy3377 80 DTNALYVARKGMEIQSYMKEGMIEDWDLFEKVLDYTYSKCIESGSEYH-PVLMSEAPWNIRSKREKLLELMFEKYNVPAF 158 (336)
Q Consensus 80 G~~~~~~~~~~~~l~~pi~~G~i~n~d~~e~i~~~~~~~~L~~~~~~~-pvllte~~~~~~~~r~~l~e~lFE~~~vp~v 158 (336)
|+++....++.+.+.+|+++|+|.|||++|+||+|+|.+.|++++++| |||||||+++++..|++++|++||+|++|++
T Consensus 67 G~e~~~~~r~~l~l~~Pi~~GvI~dwd~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav 146 (498)
T 3qb0_A 67 SEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEAC 146 (498)
T ss_dssp CTTGGGSCCTTEEEEESEETTEESCHHHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEE
T ss_pred ecHHHhcCcCceEEeccCcCCEEccHHHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeE
Confidence 997556678899999999999999999999999999988999999999 9999999999999999999999999999999
Q ss_pred EEehhHHHHHHHcCCCeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHHHHHHHHHHhCCcccCCCCccccceec
Q psy3377 159 FLVKNAVLAAFANGRATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQCKQFLQENNIDIIPPYMVGGKEAI 238 (336)
Q Consensus 159 ~~~~~~~la~~s~g~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~l~~lL~~~~~~~~~~~~~~~~~~v 238 (336)
+++.+++||+||+|++||||||+|++.|+|+||++|++++++++++++||++||++|+++|+++++ .|.+.+..+...
T Consensus 147 ~l~~~~vlalya~G~~tglVVDiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i--~P~~~i~~k~~~ 224 (498)
T 3qb0_A 147 YLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEI--IPLFAIKQRKPE 224 (498)
T ss_dssp EEEEHHHHHHHHHTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCC--CCSTTEEECSSS
T ss_pred eecchHHHHHHHcCCCeEEEEEcCCCcEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccc--cchhhhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999999987643 455444332110
Q ss_pred cCCCCCcccccCCCC-CCChhhhhhh-hhHHHHHHHHHhhhccCC-Ccchh--hhcCCCCeEEECCCcceeeecCc-ccc
Q psy3377 239 KDKEPPKWTRKKNLP-EVTQSWHNYS-VKKVVQDFQQSVLQVSET-PFDEK--SILNLPPSHYEFPNGYHQDFGCR-ALP 312 (336)
Q Consensus 239 ~~~~~~~~~~Ke~~c-~~~~s~~~~~-~~~v~~d~~~~~~~~~~~-~~~~~--~~~~~~~~~y~LPDg~~i~l~~E-rf~ 312 (336)
+. ++.+. .++.||.+|. .+.+++|+||.+|.++.. .+++. .......+.|+||||++|.++.| ||+
T Consensus 225 -------~~-~~~~~~~~~~s~~~~~~~~~iv~~iKE~~c~Va~~~~~~~~~~~~~~~~~~~yeLPDG~~i~lg~E~Rf~ 296 (498)
T 3qb0_A 225 -------FI-KKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSSTAKRSIESPWNEEIVFDNETRYG 296 (498)
T ss_dssp -------CE-ECCCSSCCCHHHHHHHHHHTHHHHHHHHTCCCCSSCHHHHHHHHHHTCCCEEEECSSSCEEEECHHHHHH
T ss_pred -------cc-cccCCCccCccHHHHHHHHHHHHHHHHhhEEecCCccHhHHhhhccCcCceEEECCCCCEEEECchHhhh
Confidence 00 11222 3567899998 455999999999998764 34332 12345678999999999999999 999
Q ss_pred cccccccccccCCC-----CCCCCCCCCC
Q psy3377 313 YSRGSVVQNIANMQ-----PGSGISPTDH 336 (336)
Q Consensus 313 ~~E~lF~p~~~~~~-----~~~gi~~~~~ 336 (336)
|||+||+|+++|+. +..|+.++.|
T Consensus 297 ~pE~LF~P~~~g~~~~~~~~~~~~~~~~~ 325 (498)
T 3qb0_A 297 FAEELFLPKEDDIPANWPRSNSGVVKTWR 325 (498)
T ss_dssp HHHTTTSCCGGGSCTTSCCCSSSCCCCCS
T ss_pred CchhhCCHhHcCCcccccccccccccccc
Confidence 99999999999982 1356655543
No 2
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-60 Score=464.82 Aligned_cols=290 Identities=24% Similarity=0.352 Sum_probs=222.0
Q ss_pred CCceEEEecCCceEEEeeeCCCCCeEEccCCceeecCCCcccc-CCCCCCC----CCCCCCCcccCCCCceEecchhhhc
Q psy3377 12 EIGALVFDVGSQSLRVGYAQEDSPKAEIPAVVGVVEDGGQTAS-IDTPMDV----DVKPDTNNVTASGNKYFIDTNALYV 86 (336)
Q Consensus 12 ~~~~vViD~Gs~~~kaG~age~~P~~~~ps~v~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~vG~~~~~~ 86 (336)
+.++||||+||+++||||||++.|+++|||+||++++...... ....+.. .+.......+..+++++||+++...
T Consensus 4 ~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~~ 83 (427)
T 3dwl_A 4 FNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKK 83 (427)
T ss_dssp CCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHHT
T ss_pred CCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhhC
Confidence 5679999999999999999999999999999999875410000 0000000 0000000001124688999998654
Q ss_pred ccCCeEEeccccCCcccCHHHHHHHHHHHhhcccCCCCCCCceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHH
Q psy3377 87 ARKGMEIQSYMKEGMIEDWDLFEKVLDYTYSKCIESGSEYHPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVL 166 (336)
Q Consensus 87 ~~~~~~l~~pi~~G~i~n~d~~e~i~~~~~~~~L~~~~~~~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~l 166 (336)
....+.+++|+++|+|.|||++|++|+|+|++.|+++|++||+|||||+++++..|++++|++||+|++|+++++.+++|
T Consensus 84 ~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vl 163 (427)
T 3dwl_A 84 ASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVL 163 (427)
T ss_dssp HHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHH
T ss_pred cccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHH
Confidence 43478999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcC--------CCeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHHHHHHHHHHhCCcccCCCCccccceec
Q psy3377 167 AAFANG--------RATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQCKQFLQENNIDIIPPYMVGGKEAI 238 (336)
Q Consensus 167 a~~s~g--------~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~l~~lL~~~~~~~~~~~~~~~~~~v 238 (336)
|+|++| ++||+|||+|++.|+|+||++|++++++++++++||+++|++|+++|+++++.. .+.+.+
T Consensus 164 a~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~~------~~~~~~ 237 (427)
T 3dwl_A 164 ALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPD------SSLKTA 237 (427)
T ss_dssp HHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC--------------CHHH
T ss_pred HHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCCc------hhHHHH
Confidence 999999 689999999999999999999999999999999999999999999999887752 255678
Q ss_pred cCCCCCcccccCCCCCCChhhhhhhhhHHHHHHHHHhhhccCCCcchhhhcCCCCeEEEC--CCcc--eeeecCcccccc
Q psy3377 239 KDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILNLPPSHYEF--PNGY--HQDFGCRALPYS 314 (336)
Q Consensus 239 ~~~~~~~~~~Ke~~c~~~~s~~~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~y~L--PDg~--~i~l~~Erf~~~ 314 (336)
+++ ||++| ||+.|+.+++......+ ...+.|+| |||+ +|+++.|||+||
T Consensus 238 ~~I-------Ke~~c------------yv~~d~~~e~~~~~~~~--------~~~~~~~l~~~~g~~~~i~ig~erf~~p 290 (427)
T 3dwl_A 238 ERI-------KEECC------------YVCPDIVKEFSRFDREP--------DRYLKYASESITGHSTTIDVGFERFLAP 290 (427)
T ss_dssp HHH-------HHHHC------------CCCSCHHHHHHHTTC-------------CCBCC---------CBCCTHHHHSG
T ss_pred HHH-------HHhcC------------cccCCHHHHHHHhhcCc--------cccceeEeeCCCCCeeEEEEChHhhhCh
Confidence 888 99999 55555555544322211 01356788 8997 899999999999
Q ss_pred cccccccccCCCCCCCCCCC
Q psy3377 315 RGSVVQNIANMQPGSGISPT 334 (336)
Q Consensus 315 E~lF~p~~~~~~~~~gi~~~ 334 (336)
|+||+|+++|.+...||+++
T Consensus 291 E~LF~P~~~g~~~~~gI~~~ 310 (427)
T 3dwl_A 291 EIFFNPEIASSDFLTPLPEL 310 (427)
T ss_dssp GGGTCGGGTCSSCCSCHHHH
T ss_pred hhccCchhcCCccCCCccHH
Confidence 99999999999844788764
No 3
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=1.2e-53 Score=409.61 Aligned_cols=275 Identities=30% Similarity=0.523 Sum_probs=233.0
Q ss_pred CCCCceEEEecCCceEEEeeeCCCCCeEEccCCceeecCCCccccCCCCCCCCCCCCCCcccCCCCceEecchhhhcccC
Q psy3377 10 GDEIGALVFDVGSQSLRVGYAQEDSPKAEIPAVVGVVEDGGQTASIDTPMDVDVKPDTNNVTASGNKYFIDTNALYVARK 89 (336)
Q Consensus 10 ~~~~~~vViD~Gs~~~kaG~age~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ 89 (336)
.|+.++||||+||+++|+||+|++.|++++||++++++...... +. ..+++++|+++.. .+.
T Consensus 2 ~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~-------~~----------~~~~~~vG~~a~~-~~~ 63 (375)
T 2fxu_A 2 EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMV-------GM----------GQKDSYVGDEAQS-KRG 63 (375)
T ss_dssp --CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC------------------------CCEEHHHHHH-HTT
T ss_pred CCCCceEEEECCCCeEEEEECCCCCCceeecccccccccccccc-------CC----------CCCCeEechhHhh-cCc
Confidence 46788999999999999999999999999999999987643211 00 1257899999854 467
Q ss_pred CeEEeccccCCcccCHHHHHHHHHHHhhcccCCCCCCCceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHH
Q psy3377 90 GMEIQSYMKEGMIEDWDLFEKVLDYTYSKCIESGSEYHPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAF 169 (336)
Q Consensus 90 ~~~l~~pi~~G~i~n~d~~e~i~~~~~~~~L~~~~~~~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~ 169 (336)
.+.+.+|+++|+|.|||.+|.+|+|+|.+.|+++++++|+++|+|+++++..|++++|++||.|++|+++++++|++|+|
T Consensus 64 ~~~~~~Pi~~G~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~ 143 (375)
T 2fxu_A 64 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLY 143 (375)
T ss_dssp SEEEECSEETTEECCHHHHHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHH
T ss_pred ccceeccccCCcccCHHHHHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeee
Confidence 79999999999999999999999999988899999999999999999999999999999999999999999999999999
Q ss_pred HcCCCeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHHHHHHHHHHhCCcccCCCCccccceeccCCCCCccccc
Q psy3377 170 ANGRATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQCKQFLQENNIDIIPPYMVGGKEAIKDKEPPKWTRK 249 (336)
Q Consensus 170 s~g~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~l~~lL~~~~~~~~~~~~~~~~~~v~~~~~~~~~~K 249 (336)
++|+++++|||+|+++|+|+||++|+++.+++.++++||+++|++|.++|.++++++.+ ..+.+.++++ |
T Consensus 144 a~g~~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~---~~~~~~~e~i-------K 213 (375)
T 2fxu_A 144 ASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVT---TAEREIVRDI-------K 213 (375)
T ss_dssp HTTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCS---HHHHHHHHHH-------H
T ss_pred ecCCCeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCc---HHHHHHHHHH-------H
Confidence 99999999999999999999999999999999999999999999999999988776642 1234566777 9
Q ss_pred CCCCCCChhhhhhhhhHHHHHHHHHhhhccCCCcchhhhcCCCCeEEECCCcceeeecCcccccccccccccccCCCCCC
Q psy3377 250 KNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILNLPPSHYEFPNGYHQDFGCRALPYSRGSVVQNIANMQPGS 329 (336)
Q Consensus 250 e~~c~~~~s~~~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~y~LPDg~~i~l~~Erf~~~E~lF~p~~~~~~~~~ 329 (336)
+++|++..++ .+++..... .......|+||||+.+.++.|||.+||.||+|+++|.+ ..
T Consensus 214 ~~~~~v~~~~------------~~e~~~~~~--------~~~~~~~~~lpdg~~i~i~~erf~~~E~lf~p~~~~~~-~~ 272 (375)
T 2fxu_A 214 EKLCYVALDF------------ENEMATAAS--------SSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGME-SA 272 (375)
T ss_dssp HHHCCCCSSH------------HHHHHHHHH--------CSTTCEEEECTTSCEEEESTHHHHHHHTTTCGGGGTCC-SC
T ss_pred HHHHhhcccH------------HHHHHhhcc--------cCccCeEEECCCCCEEEEChhheechHhhCCCccCCCC-CC
Confidence 9999555433 222221110 11234789999999999999999999999999999998 78
Q ss_pred CCCC
Q psy3377 330 GISP 333 (336)
Q Consensus 330 gi~~ 333 (336)
||++
T Consensus 273 ~i~~ 276 (375)
T 2fxu_A 273 GIHE 276 (375)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 8765
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=5.2e-55 Score=421.80 Aligned_cols=278 Identities=24% Similarity=0.380 Sum_probs=104.0
Q ss_pred CCCCceEEEecCCceEEEeeeCCCCCeEEccCCceeecCCCccccCCCCCCCCCCCCCCcccCCCCceEecchhhhcccC
Q psy3377 10 GDEIGALVFDVGSQSLRVGYAQEDSPKAEIPAVVGVVEDGGQTASIDTPMDVDVKPDTNNVTASGNKYFIDTNALYVARK 89 (336)
Q Consensus 10 ~~~~~~vViD~Gs~~~kaG~age~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ 89 (336)
..+.++||||+||+++|+||+|++.|++++||++++++...... .++ ...+++++|+++.. .++
T Consensus 3 ~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~-----~~~----------~~~~~~~vG~ea~~-~~~ 66 (394)
T 1k8k_B 3 SQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTK-----VGN----------IEIKDLMVGDEASE-LRS 66 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEccccccc-----ccC----------CCCCCeEEChHHHh-cCC
Confidence 34668999999999999999999999999999999887643110 000 01257889999843 467
Q ss_pred CeEEeccccCCcccCHHHHHHHHHHHh-hcccCCCCCCCceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHH
Q psy3377 90 GMEIQSYMKEGMIEDWDLFEKVLDYTY-SKCIESGSEYHPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAA 168 (336)
Q Consensus 90 ~~~l~~pi~~G~i~n~d~~e~i~~~~~-~~~L~~~~~~~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~ 168 (336)
.+.+.+|+++|+|.|||.++.+|+|+| .+.|+++++++|+++|+|+++++..|++++|++||.|++|+++++++++||+
T Consensus 67 ~~~~~~Pi~~G~i~dwd~~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~ 146 (394)
T 1k8k_B 67 MLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTL 146 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceeeccccCCEEecHHHHHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHH
Confidence 789999999999999999999999999 8899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHHHHHHHHHHhCCcccCCCCccccceeccCCCCCcccc
Q psy3377 169 FANGRATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQCKQFLQENNIDIIPPYMVGGKEAIKDKEPPKWTR 248 (336)
Q Consensus 169 ~s~g~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~l~~lL~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 248 (336)
|++|+++|+|||+|++.|+|+||++|+++.+++.++++||+++|++|.++|.++++++.+ ..+.+.++++
T Consensus 147 ~a~g~~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~---~~~~~~ae~i------- 216 (394)
T 1k8k_B 147 YAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNH---SADFETVRMI------- 216 (394)
T ss_dssp -------CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCT---TTTHHHHHHH-------
T ss_pred HhCCCceEEEEEcCCCceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCc---HHHHHHHHHH-------
Confidence 999999999999999999999999999999999999999999999999999998887753 2245667777
Q ss_pred cCCCCCCChhhhhhhhhHHHHHHHHHhhhccCCCcchhhhcCCCCeEEECCCcceeeecCcccccccccccccccCCCCC
Q psy3377 249 KKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILNLPPSHYEFPNGYHQDFGCRALPYSRGSVVQNIANMQPG 328 (336)
Q Consensus 249 Ke~~c~~~~s~~~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~y~LPDg~~i~l~~Erf~~~E~lF~p~~~~~~~~ 328 (336)
|+++|++..++. +++....+ .......|+||||+.|.++.|||.+||+||+|+++|.+ .
T Consensus 217 K~~~~~v~~d~~------------~~~~~~~~--------~~~~~~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~-~ 275 (394)
T 1k8k_B 217 KEKLCYVGYNIE------------QEQKLALE--------TTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVE-G 275 (394)
T ss_dssp HHHHCCCCSSHH------------HHHHHHHH--------CSTTCEEEECTTSCEEEECTHHHHTGGGGTCGGGGTCC-S
T ss_pred HHhheeEecCHH------------HHHHhhcc--------CCcCceEEECCCCCEEEECchhhcChHhhCCchhccCC-C
Confidence 999996654432 22211100 11234689999999999999999999999999999998 7
Q ss_pred CCCCCC
Q psy3377 329 SGISPT 334 (336)
Q Consensus 329 ~gi~~~ 334 (336)
.||++.
T Consensus 276 ~~i~~~ 281 (394)
T 1k8k_B 276 VGVAEL 281 (394)
T ss_dssp CCHHHH
T ss_pred CCHHHH
Confidence 888753
No 5
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.3e-52 Score=419.71 Aligned_cols=279 Identities=15% Similarity=0.163 Sum_probs=218.9
Q ss_pred CceEEEecCCceEEEeeeCCCCCeEEccCCceeecCCCcccc-CCC--CCCCCCC-------------------------
Q psy3377 13 IGALVFDVGSQSLRVGYAQEDSPKAEIPAVVGVVEDGGQTAS-IDT--PMDVDVK------------------------- 64 (336)
Q Consensus 13 ~~~vViD~Gs~~~kaG~age~~P~~~~ps~v~~~~~~~~~~~-~~~--~~~~~~~------------------------- 64 (336)
+..||||+||+++|+|||||+.|+. +|++||++........ ... ...+...
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~~-iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPAS-IPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCEE-EECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCEEEEeCCCCCeEeeecCCCCCCe-eeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 4579999999999999999999985 5999999865432110 000 0000000
Q ss_pred --------------------------C-CCC-cccCCCCceEecchhhhc-ccCCeEEeccccCC-----------cccC
Q psy3377 65 --------------------------P-DTN-NVTASGNKYFIDTNALYV-ARKGMEIQSYMKEG-----------MIED 104 (336)
Q Consensus 65 --------------------------~-~~~-~~~~~~~~~~vG~~~~~~-~~~~~~l~~pi~~G-----------~i~n 104 (336)
. +.. ......+++++|++|+.. +++.+.+.|||++| .+.|
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~ 173 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV 173 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence 0 000 001124678999999754 46789999999999 5789
Q ss_pred HHHHHHHHHHHhhcccCCCCCC---CceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHHcCCCeEEEEee
Q psy3377 105 WDLFEKVLDYTYSKCIESGSEY---HPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAFANGRATGLVFDS 181 (336)
Q Consensus 105 ~d~~e~i~~~~~~~~L~~~~~~---~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s~g~~tglVVDi 181 (336)
||+||+||+|+|.++|++++++ ||+|||||+++++..|++++|+|||+|+||+++++.+++||+||+|++||||||+
T Consensus 174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDi 253 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDV 253 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEe
Confidence 9999999999999999998876 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEEeCCEEeccceEEecchHHHHHHHHHHHHHhCCcccCCCCc--cccceeccCCCCCcccccCCCCCCChhh
Q psy3377 182 GATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQCKQFLQENNIDIIPPYM--VGGKEAIKDKEPPKWTRKKNLPEVTQSW 259 (336)
Q Consensus 182 G~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~l~~lL~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~Ke~~c~~~~s~ 259 (336)
|++.|+|+||+||+++.++++++++||++||++|+++|.++++++.+... ..+.
T Consensus 254 G~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~------------------------ 309 (593)
T 4fo0_A 254 GDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDC------------------------ 309 (593)
T ss_dssp CSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHH------------------------
T ss_pred CCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhH------------------------
Confidence 99999999999999999999999999999999999999999887653211 0122
Q ss_pred hhhhhhHHHHHHHHHhhhccCCCcchhhhcCCCCeEEECCCcce----eeecCcccccccccccccccCCC
Q psy3377 260 HNYSVKKVVQDFQQSVLQVSETPFDEKSILNLPPSHYEFPNGYH----QDFGCRALPYSRGSVVQNIANMQ 326 (336)
Q Consensus 260 ~~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~y~LPDg~~----i~l~~Erf~~~E~lF~p~~~~~~ 326 (336)
.+++++|+.+|.++.....+ ......+++|++.+ +.++.|++.+||.||+|++.+..
T Consensus 310 ------~~v~~iKe~~c~v~~d~~~~----~~~~~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~ 370 (593)
T 4fo0_A 310 ------LLLQHLKETFCHLDQDISGL----QDHEFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIV 370 (593)
T ss_dssp ------HHHHHHHHHHCBCCTTCCSC----EEEEEEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCC
T ss_pred ------HHHHHHHHHhcccccchHHh----hhhhhhcccCCCCceeeEEeccchhhcCchhhcChhhhccc
Confidence 34445555544443321111 11235678899875 67899999999999999999876
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=4.2e-49 Score=383.17 Aligned_cols=281 Identities=27% Similarity=0.373 Sum_probs=225.9
Q ss_pred CCceEEEecCCceEEEeeeCCCCCeEEccCCceeecCCCccccCCCCCCCCCCCCCCcccCCCCceEecchhhhcccCCe
Q psy3377 12 EIGALVFDVGSQSLRVGYAQEDSPKAEIPAVVGVVEDGGQTASIDTPMDVDVKPDTNNVTASGNKYFIDTNALYVARKGM 91 (336)
Q Consensus 12 ~~~~vViD~Gs~~~kaG~age~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~ 91 (336)
+.++||||+||+++|+||+|++.|++++||++++++...... .............++++|+++... + .+
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~---------~~~~~~~~~~~~~~~~vG~~a~~~-~-~~ 72 (418)
T 1k8k_A 4 RLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGD---------QAQRRVMKGVDDLDFFIGDEAIEK-P-TY 72 (418)
T ss_dssp CSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC--------------------CCCTTGGGCEEEGGGGTSC-T-TS
T ss_pred CCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccc---------cccccccccccccCeEEChHHHhc-C-CC
Confidence 557899999999999999999999999999999886532100 000000000012468999998654 3 58
Q ss_pred EEeccccCCcccCHHHHHHHHHHHhhcccCCCCCCCceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHH-
Q psy3377 92 EIQSYMKEGMIEDWDLFEKVLDYTYSKCIESGSEYHPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAFA- 170 (336)
Q Consensus 92 ~l~~pi~~G~i~n~d~~e~i~~~~~~~~L~~~~~~~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s- 170 (336)
.+.+|+++|+|.|||.++.+|+|+|.+.|+++++++++++|+|++++...|+++.|++||.+++|+++++++|++|+|+
T Consensus 73 ~~~~pi~~G~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~ 152 (418)
T 1k8k_A 73 ATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAAS 152 (418)
T ss_dssp EEECCEETTEESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHG
T ss_pred EEeccccCCEECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhh
Confidence 9999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred --------cCCCeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHHHHHHHHHHhCCcccCCCCccccceeccCCC
Q psy3377 171 --------NGRATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQCKQFLQENNIDIIPPYMVGGKEAIKDKE 242 (336)
Q Consensus 171 --------~g~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~l~~lL~~~~~~~~~~~~~~~~~~v~~~~ 242 (336)
.|+ +|+|||+|++.|+|+||++|+++.+++.++++||+++|++|.++|.++++.+.+ ..+.+.++++
T Consensus 153 ~~~~~~~~~~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~---~~~~~~~e~i- 227 (418)
T 1k8k_A 153 WTSRQVGERTL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPP---EQSLETAKAV- 227 (418)
T ss_dssp GGSTTCCSCCC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCG---GGHHHHHHHH-
T ss_pred hcccccCCCCC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCC---HHHHHHHHHH-
Confidence 566 999999999999999999999999999999999999999999999988776542 2234566777
Q ss_pred CCcccccCCCCCCChhhhhhhhhHHHHHHHHHhhhccCCCcchhhhcCCCCeEEECCCcc-----eeeecCccccccccc
Q psy3377 243 PPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILNLPPSHYEFPNGY-----HQDFGCRALPYSRGS 317 (336)
Q Consensus 243 ~~~~~~Ke~~c~~~~s~~~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~y~LPDg~-----~i~l~~Erf~~~E~l 317 (336)
|+++|++..++ .+++...... .......|+||||+ .+.++.|||.+||+|
T Consensus 228 ------K~~~~~v~~~~------------~~e~~~~~~~-------~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~l 282 (418)
T 1k8k_A 228 ------KERYSYVCPDL------------VKEFNKYDTD-------GSKWIKQYTGINAISKKEFSIDVGYERFLGPEIF 282 (418)
T ss_dssp ------HHHHCCCCSCH------------HHHHHHHHHS-------GGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTT
T ss_pred ------HHhhchhcccH------------HHHHHhhccc-------ccccceeEECCCCCCCcccEEEeChHHhhCcHhh
Confidence 99999555443 2222111000 00113689999998 999999999999999
Q ss_pred ccccccCCCCCCCCCC
Q psy3377 318 VVQNIANMQPGSGISP 333 (336)
Q Consensus 318 F~p~~~~~~~~~gi~~ 333 (336)
|+|++++.+...||++
T Consensus 283 F~P~~~~~~~~~~i~~ 298 (418)
T 1k8k_A 283 FHPEFANPDFTQPISE 298 (418)
T ss_dssp TCGGGTCTTCCCCHHH
T ss_pred CCCccCCCCCCCCHHH
Confidence 9999998874467754
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=8.1e-48 Score=382.07 Aligned_cols=283 Identities=18% Similarity=0.230 Sum_probs=219.9
Q ss_pred ccCCCCceEEEecCCceEEEeeeCCCCCeEEccCCceeecCCCccc--cC-CCC--------------------------
Q psy3377 8 YGGDEIGALVFDVGSQSLRVGYAQEDSPKAEIPAVVGVVEDGGQTA--SI-DTP-------------------------- 58 (336)
Q Consensus 8 ~~~~~~~~vViD~Gs~~~kaG~age~~P~~~~ps~v~~~~~~~~~~--~~-~~~-------------------------- 58 (336)
-..|...+|||..||.++|+|+|.|..|. .+|++|+++....... .+ ..+
T Consensus 35 ~~~~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr 113 (655)
T 4am6_A 35 DLNDPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMR 113 (655)
T ss_dssp CCCCGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHh
Confidence 34455689999999999999999999997 5799999874322210 00 000
Q ss_pred -------CCCCCCC-------CCC-----c--cc----CCCCceEecchhhhcccCCeEEeccccCCccc----C-----
Q psy3377 59 -------MDVDVKP-------DTN-----N--VT----ASGNKYFIDTNALYVARKGMEIQSYMKEGMIE----D----- 104 (336)
Q Consensus 59 -------~~~~~~~-------~~~-----~--~~----~~~~~~~vG~~~~~~~~~~~~l~~pi~~G~i~----n----- 104 (336)
++..... .++ + .+ ...++++||++|+...++.+.+++||++|+|. |
T Consensus 114 ~~k~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q 193 (655)
T 4am6_A 114 YYKRKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLA 193 (655)
T ss_dssp HHSCCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHH
T ss_pred hcCCCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCcccccc
Confidence 0000000 000 0 00 01358899999976567899999999999998 8
Q ss_pred --HHHHHHHHHHHhh-cccCCCCC---CCceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHHcC-CCeEE
Q psy3377 105 --WDLFEKVLDYTYS-KCIESGSE---YHPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAFANG-RATGL 177 (336)
Q Consensus 105 --~d~~e~i~~~~~~-~~L~~~~~---~~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s~g-~~tgl 177 (336)
||++|.||+|+|. +.|+++|+ ++|||||||+++++..|++++|++||+|++|+++++.+++||+||+| +++||
T Consensus 194 ~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGL 273 (655)
T 4am6_A 194 ELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTC 273 (655)
T ss_dssp HHHHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEE
T ss_pred ccHHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceE
Confidence 9999999999998 48999996 89999999999999999999999999999999999999999999999 79999
Q ss_pred EEeeCCCcEEEEEEeCCEEeccceEEecchHHHHHHHHHHHHHhCCcccCCC--CccccceeccCCCCCcccccCCCCCC
Q psy3377 178 VFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQCKQFLQENNIDIIPP--YMVGGKEAIKDKEPPKWTRKKNLPEV 255 (336)
Q Consensus 178 VVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~l~~lL~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~Ke~~c~~ 255 (336)
|||+|++.|+|+||++|++++++++++++||+++|++|+++|.++++.+... .+..+.++++++ ||++|
T Consensus 274 VVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdI-------KEk~C-- 344 (655)
T 4am6_A 274 VVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERL-------KKNFT-- 344 (655)
T ss_dssp EEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHH-------HHHHC--
T ss_pred EEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHH-------HHheE--
Confidence 9999999999999999999999999999999999999999999998743100 022345666666 77777
Q ss_pred ChhhhhhhhhHH-HHHHHHHhhhccCCCcchhhhcCCCCeEEECCCc----ceeeecCcccccccccccccccCCC
Q psy3377 256 TQSWHNYSVKKV-VQDFQQSVLQVSETPFDEKSILNLPPSHYEFPNG----YHQDFGCRALPYSRGSVVQNIANMQ 326 (336)
Q Consensus 256 ~~s~~~~~~~~v-~~d~~~~~~~~~~~~~~~~~~~~~~~~~y~LPDg----~~i~l~~Erf~~~E~lF~p~~~~~~ 326 (336)
|| ..|+. + + ......+.|++ ++|.++.|||+|||+||+|+++++.
T Consensus 345 ----------yVs~~Di~-----~-----q------~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~ 394 (655)
T 4am6_A 345 ----------TFQDADVA-----V-----Q------LYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLI 394 (655)
T ss_dssp ----------CCCGGGCC-----S-----E------EEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHT
T ss_pred ----------EEcccchh-----h-----h------hhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccc
Confidence 44 22220 0 0 00112244653 5799999999999999999999886
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.90 E-value=2.2e-22 Score=190.01 Aligned_cols=181 Identities=17% Similarity=0.206 Sum_probs=154.2
Q ss_pred ceEEEecCCceEEEeeeCCCCCeEEccCCceeecCCCccccCCCCCCCCCCCCCCcccCCCCceEecchhhhcc---cCC
Q psy3377 14 GALVFDVGSQSLRVGYAQEDSPKAEIPAVVGVVEDGGQTASIDTPMDVDVKPDTNNVTASGNKYFIDTNALYVA---RKG 90 (336)
Q Consensus 14 ~~vViD~Gs~~~kaG~age~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~---~~~ 90 (336)
.+|+||+||.++|+|++++. |...+||+|+..... .+.+++|++|.... ..+
T Consensus 4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~------------------------~~~~~vG~~A~~~~~~~~~~ 58 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT------------------------GEILKVGLEAKNMIGKTPAT 58 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT------------------------CCEEEESHHHHTTTTCCCTT
T ss_pred ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC------------------------CcEEEEcHHHHHhcccCCCC
Confidence 47999999999999999875 788899999876531 13468999985422 235
Q ss_pred eEEeccccCCcccCHHHHHHHHHHHhhcccCCC-CCCCceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHH
Q psy3377 91 MEIQSYMKEGMIEDWDLFEKVLDYTYSKCIESG-SEYHPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAF 169 (336)
Q Consensus 91 ~~l~~pi~~G~i~n~d~~e~i~~~~~~~~L~~~-~~~~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~ 169 (336)
..+.+|+++|.+.||+.++.+|.+++.+..... +.+.++++|.|+..+..+|+.+.+ ++|.+|++.+.++.+|.+|++
T Consensus 59 ~~~~~p~~~g~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~-a~~~aG~~~~~li~ep~Aaa~ 137 (344)
T 1jce_A 59 IKAIRPMRDGVIADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILD-AGLEAGASKVFLIEEPMAAAI 137 (344)
T ss_dssp EEEECCEETTEESSHHHHHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHH-HHHHTTCSEEEEEEHHHHHHH
T ss_pred eEEEecCCCCeeCChHHHHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEeccCCHHHHHH
Confidence 677899999999999999999999996432323 456899999999999999999988 579999999999999999999
Q ss_pred HcCC-----CeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHHHHHHHHHHhC
Q psy3377 170 ANGR-----ATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQCKQFLQEN 222 (336)
Q Consensus 170 s~g~-----~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~l~~lL~~~ 222 (336)
+++. .+.+|||+|+++|+++++..|.++ .....++||+++|+.|.++|.++
T Consensus 138 ~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~--~~~~~~lGG~~id~~l~~~l~~~ 193 (344)
T 1jce_A 138 GSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIV--TWESIRIAGDEMDEAIVQYVRET 193 (344)
T ss_dssp HTTCCTTSSSCEEEEEECSSCEEEEEEETTEEE--EEEEESCSHHHHHHHHHHHHHHH
T ss_pred hcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEE--eeCCCCccChhHHHHHHHHHHHH
Confidence 9986 689999999999999999999987 45779999999999999998754
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.60 E-value=2.4e-14 Score=130.27 Aligned_cols=124 Identities=20% Similarity=0.211 Sum_probs=101.8
Q ss_pred eccccCCcccCHHHHHHHHHHHhhcccCCCC-CCCceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHHcC
Q psy3377 94 QSYMKEGMIEDWDLFEKVLDYTYSKCIESGS-EYHPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAFANG 172 (336)
Q Consensus 94 ~~pi~~G~i~n~d~~e~i~~~~~~~~L~~~~-~~~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s~g 172 (336)
..|+++|.|.||+.++.+|++++........ ....++++.|....... ++.++.++|.+|++...+..++.++++++|
T Consensus 59 ~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~-~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~ 137 (272)
T 3h1q_A 59 ASVVKDGLVVDYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRN-AEACGHVVAGAGLELVTLVDEPVAAARALG 137 (272)
T ss_dssp CCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---C-TTHHHHHHHHTTCEEEEEECHHHHHHHHHT
T ss_pred ccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHH-HHHHHHHHHHcCCeeeecccHHHHHHHHHc
Confidence 4689999999999999999999864333222 23456666666554444 455677899999999999999999999999
Q ss_pred CCeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHHHHHHHHHH
Q psy3377 173 RATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQCKQFLQ 220 (336)
Q Consensus 173 ~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~l~~lL~ 220 (336)
..+++|||+|+++|.++++.+|.++ ....+++||..+++.+.+.|.
T Consensus 138 ~~~~~viDiGggst~~~~~~~g~~~--~~~~~~~Gg~~~~~~l~~~l~ 183 (272)
T 3h1q_A 138 INDGIVVDIGGGTTGIAVIEKGKIT--ATFDEPTGGTHLSLVLAGSYK 183 (272)
T ss_dssp CSSEEEEEECSSCEEEEEEETTEEE--EECCBSCCHHHHHHHHHHHHT
T ss_pred CCCEEEEEECCCcEEEEEEECCEEE--EEecCCCcHHHHHHHHHHHhC
Confidence 9999999999999999999999988 457799999999999998875
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.51 E-value=7e-14 Score=138.62 Aligned_cols=177 Identities=18% Similarity=0.220 Sum_probs=128.1
Q ss_pred ceEEEecCCceEEEeeeCCCCCeEE--------ccCCceeecCCCccccCCCCCCCCCCCCCCcccCCCCceEecchhhh
Q psy3377 14 GALVFDVGSQSLRVGYAQEDSPKAE--------IPAVVGVVEDGGQTASIDTPMDVDVKPDTNNVTASGNKYFIDTNALY 85 (336)
Q Consensus 14 ~~vViD~Gs~~~kaG~age~~P~~~--------~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~ 85 (336)
.+|.||+||.+++++++.+..|.++ +||+|+.. . .+.++|++|..
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~-~--------------------------~~~~vG~~A~~ 55 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK-N--------------------------GERLVGEVAKR 55 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES-S--------------------------SSEEESHHHHT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC-C--------------------------CcEEECHHHHH
Confidence 4799999999999999988888876 67777651 1 24567877743
Q ss_pred cc-cCCeE---Eec----ccc---CCcccCHHHHHHHHHHHhhcccC------CCCCCCceEEEeCCCCCHHHHHHHHHH
Q psy3377 86 VA-RKGME---IQS----YMK---EGMIEDWDLFEKVLDYTYSKCIE------SGSEYHPVLMSEAPWNIRSKREKLLEL 148 (336)
Q Consensus 86 ~~-~~~~~---l~~----pi~---~G~i~n~d~~e~i~~~~~~~~L~------~~~~~~pvllte~~~~~~~~r~~l~e~ 148 (336)
.. +.... +++ |++ +|. +|+ .+.+|.+++. .|. .......+++|.|.+++..+|+.+.+.
T Consensus 56 ~~~~~p~~~~~~Kr~lg~p~~~~~~g~--~~~-~~ei~a~~L~-~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a 131 (509)
T 2v7y_A 56 QAITNPNTIISIKRHMGTDYKVEIEGK--QYT-PQEISAIILQ-YLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA 131 (509)
T ss_dssp TTTTCSSEEECGGGTTTSCCCEEETTE--EEC-HHHHHHHHHH-HHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred hHHhCCCcHHHHHHhcCCCcEEEECCE--EEc-HHHHHHHHHH-HHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 21 11111 111 555 664 444 4555555553 222 122347899999999999999998875
Q ss_pred HHhhcCCCeEEEehhHHHHHHHcCC-----CeEEEEeeCCCcEEEEEEe--CCEE-eccceEEecchHHHHHHHHHHHHH
Q psy3377 149 MFEKYNVPAFFLVKNAVLAAFANGR-----ATGLVFDSGATHTSAIPVH--DGYV-LTHAIAKSPLGGDYLTMQCKQFLQ 220 (336)
Q Consensus 149 lFE~~~vp~v~~~~~~~la~~s~g~-----~tglVVDiG~~~t~v~pV~--dG~~-~~~~~~~~~iGG~~lt~~l~~lL~ 220 (336)
++..|++.+.++++|.+|++++|. .+.+|+|+|++++.++.+. +|.. +.......++||+++++.|.++|.
T Consensus 132 -~~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~ 210 (509)
T 2v7y_A 132 -GRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLV 210 (509)
T ss_dssp -HHHTTCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred -HHHcCCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHH
Confidence 689999999999999999999986 4799999999999999766 3643 333344578999999999999886
Q ss_pred hC
Q psy3377 221 EN 222 (336)
Q Consensus 221 ~~ 222 (336)
++
T Consensus 211 ~~ 212 (509)
T 2v7y_A 211 NQ 212 (509)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 11
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.47 E-value=1.9e-12 Score=123.60 Aligned_cols=96 Identities=16% Similarity=0.197 Sum_probs=77.8
Q ss_pred CCCceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHHcCCCe------EEEEeeCCCcEEEEEEe--CCEE
Q psy3377 125 EYHPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAFANGRAT------GLVFDSGATHTSAIPVH--DGYV 196 (336)
Q Consensus 125 ~~~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s~g~~t------glVVDiG~~~t~v~pV~--dG~~ 196 (336)
.-..++++.|..++...|+.+.+.+ +..|++.+.++.+|.+|+++++... -+|||+|+++|.++.+- ++..
T Consensus 152 ~~~~~vitvP~~~~~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~ 230 (394)
T 3qfu_A 152 KVTHAVVTVPAYFNDAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVF 230 (394)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CcceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEE
Confidence 3468999999999999999887666 8999999999999999999997653 39999999999777654 4543
Q ss_pred eccc-eEEecchHHHHHHHHHHHHHh
Q psy3377 197 LTHA-IAKSPLGGDYLTMQCKQFLQE 221 (336)
Q Consensus 197 ~~~~-~~~~~iGG~~lt~~l~~lL~~ 221 (336)
-..+ ....++||.++++.|.++|.+
T Consensus 231 ~~~~~~~~~~lGG~~~d~~l~~~l~~ 256 (394)
T 3qfu_A 231 EVQATSGDTHLGGEDFDYKIVRQLIK 256 (394)
T ss_dssp EEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCChHHHHHHHHHHHHH
Confidence 3223 334799999999999988853
No 12
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.33 E-value=3.8e-11 Score=115.14 Aligned_cols=95 Identities=19% Similarity=0.267 Sum_probs=77.7
Q ss_pred CCceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHHcCCCe---------EEEEeeCCCcEEEEEEe--CC
Q psy3377 126 YHPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAFANGRAT---------GLVFDSGATHTSAIPVH--DG 194 (336)
Q Consensus 126 ~~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s~g~~t---------glVVDiG~~~t~v~pV~--dG 194 (336)
-..+++|.|..++..+|+.+.+. ++..|++.+.++++|.+|+++++... -+|||+|.++|.++.+- +|
T Consensus 158 ~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~ 236 (404)
T 3i33_A 158 VHSAVITVPAYFNDSQRQATKDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG 236 (404)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCC
Confidence 45799999999999999888665 78899999999999999999987543 39999999999998663 44
Q ss_pred EE-eccceEEecchHHHHHHHHHHHHHh
Q psy3377 195 YV-LTHAIAKSPLGGDYLTMQCKQFLQE 221 (336)
Q Consensus 195 ~~-~~~~~~~~~iGG~~lt~~l~~lL~~ 221 (336)
.. +.......++||.++++.|.++|.+
T Consensus 237 ~~~v~~~~~~~~lGG~~~d~~l~~~l~~ 264 (404)
T 3i33_A 237 IFEVKSTAGDTHLGGEDFDNRMVSHLAE 264 (404)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 33 2233444799999999999988843
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.30 E-value=1.5e-11 Score=115.99 Aligned_cols=197 Identities=14% Similarity=0.097 Sum_probs=132.1
Q ss_pred cCCCCceEEEecCCceEEEeeeCCCCCeEEccCCceeecCCCccccCCCCCCCCCCC-CCCcccCCCCceEecchhhhcc
Q psy3377 9 GGDEIGALVFDVGSQSLRVGYAQEDSPKAEIPAVVGVVEDGGQTASIDTPMDVDVKP-DTNNVTASGNKYFIDTNALYVA 87 (336)
Q Consensus 9 ~~~~~~~vViD~Gs~~~kaG~age~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~vG~~~~~~~ 87 (336)
++-.+-.+-||+|++++|+-. ++ .-.+.+||+++......... +....-.. ++...++.++.+.+|++|.
T Consensus 17 ~~~~m~~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~~----~~~~~v~~~~g~~~~~~~~~~~vG~~A~--- 87 (346)
T 2fsj_A 17 RGSHMVVVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGI----GGKIPVLSTDGGQTKFIYGKYASGNNIR--- 87 (346)
T ss_dssp ----CEEEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC--------CCCCBBSSTTSSEEEEGGGCCSSCCB---
T ss_pred CCceeEEEEEecCCcceeEEe-cC-CCEEEecceeeeccccccCc----CcceEEEEecccccccCCcEEEEcccee---
Confidence 333445689999999999854 33 34678999998765431100 00000000 0000000135677998762
Q ss_pred cCCeEEeccccCCcccCHHHHHHHHHHHhhccc-CCCCCCCceE--EEeCCCCCHHHHHHHHHHHHhh------------
Q psy3377 88 RKGMEIQSYMKEGMIEDWDLFEKVLDYTYSKCI-ESGSEYHPVL--MSEAPWNIRSKREKLLELMFEK------------ 152 (336)
Q Consensus 88 ~~~~~l~~pi~~G~i~n~d~~e~i~~~~~~~~L-~~~~~~~pvl--lte~~~~~~~~r~~l~e~lFE~------------ 152 (336)
+|+++|.+.+ +..+.++.+.+.+.. .-......++ ++.|......+|+.+.+.+...
T Consensus 88 -------~~l~~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~ 159 (346)
T 2fsj_A 88 -------VPQGDGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVR 159 (346)
T ss_dssp -------CCSSTTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEE
T ss_pred -------cccCCCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceE
Confidence 7999999999 888888888876432 1112334588 8888877777888887765442
Q ss_pred -cCCCeEEEehhHHHHHHHc--C-----C-CeEEEEeeCCCcEEEEEEe--CCEEeccceEEecchHHHHHHHHHHHHHh
Q psy3377 153 -YNVPAFFLVKNAVLAAFAN--G-----R-ATGLVFDSGATHTSAIPVH--DGYVLTHAIAKSPLGGDYLTMQCKQFLQE 221 (336)
Q Consensus 153 -~~vp~v~~~~~~~la~~s~--g-----~-~tglVVDiG~~~t~v~pV~--dG~~~~~~~~~~~iGG~~lt~~l~~lL~~ 221 (336)
+++..+.++++|.+|++++ + . .+-+|||+|+++|.++-+. +|.++......+++||+.+++.+.+.+++
T Consensus 160 ~i~v~~v~li~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~ 239 (346)
T 2fsj_A 160 QFNITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAK 239 (346)
T ss_dssp EEEEEEEEEEETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHH
Confidence 2356799999999999984 3 1 3449999999999999998 78766655688899999999999998875
Q ss_pred C
Q psy3377 222 N 222 (336)
Q Consensus 222 ~ 222 (336)
+
T Consensus 240 ~ 240 (346)
T 2fsj_A 240 E 240 (346)
T ss_dssp H
T ss_pred H
Confidence 4
No 14
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.27 E-value=5.4e-11 Score=113.32 Aligned_cols=114 Identities=14% Similarity=0.138 Sum_probs=86.4
Q ss_pred HHHHHHHHHHhh---cccCCCCCCCceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHHcCCC------eE
Q psy3377 106 DLFEKVLDYTYS---KCIESGSEYHPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAFANGRA------TG 176 (336)
Q Consensus 106 d~~e~i~~~~~~---~~L~~~~~~~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s~g~~------tg 176 (336)
+....+++++.. +.++ .....++++.|..++..+|+.+.+. ++..|++.+.++.+|.+|+++++.. +.
T Consensus 114 ~i~~~~L~~l~~~a~~~~~--~~~~~~vitvP~~~~~~~r~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~ 190 (383)
T 1dkg_D 114 QISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTI 190 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHS--SCCCEEEECBCTTCCHHHHHHHHHH-HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeccHHHHHHHHHhccCCCCcEE
Confidence 344455555442 1233 2345789999999999999998775 6889999999999999999988764 78
Q ss_pred EEEeeCCCcEEEEEEeCC------EEe-ccceEEecchHHHHHHHHHHHHHhC
Q psy3377 177 LVFDSGATHTSAIPVHDG------YVL-THAIAKSPLGGDYLTMQCKQFLQEN 222 (336)
Q Consensus 177 lVVDiG~~~t~v~pV~dG------~~~-~~~~~~~~iGG~~lt~~l~~lL~~~ 222 (336)
+|||+|+++|+++.+..+ ... .......++||+++|+.|.++|.++
T Consensus 191 lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~ 243 (383)
T 1dkg_D 191 AVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEE 243 (383)
T ss_dssp EEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999977644 221 1123447999999999999988654
No 15
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.01 E-value=1.1e-08 Score=98.20 Aligned_cols=113 Identities=10% Similarity=0.120 Sum_probs=82.4
Q ss_pred HHHHHHHHHHhh---cccCCCCCCCceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHHcCCC--------
Q psy3377 106 DLFEKVLDYTYS---KCIESGSEYHPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAFANGRA-------- 174 (336)
Q Consensus 106 d~~e~i~~~~~~---~~L~~~~~~~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s~g~~-------- 174 (336)
+....+++++.. ..++ .....++++.|.......|+.+.+ ..+..|+..+.++.+|.+|+++++..
T Consensus 129 ev~~~~L~~l~~~a~~~~~--~~~~~~vitvPa~~~~~~r~~~~~-a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~ 205 (409)
T 4gni_A 129 EIATRYLRRLVGAASEYLG--KKVTSAVITIPTNFTEKQKAALIA-AAAAADLEVLQLISEPAAAVLAYDARPEATISDK 205 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHTTC------CCE
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCC
Confidence 344555555542 2233 234579999999999988887655 46778999999999999999998864
Q ss_pred eEEEEeeCCCcEEEEEE--eCCEEe-ccceEEecchHHHHHHHHHHHHHh
Q psy3377 175 TGLVFDSGATHTSAIPV--HDGYVL-THAIAKSPLGGDYLTMQCKQFLQE 221 (336)
Q Consensus 175 tglVVDiG~~~t~v~pV--~dG~~~-~~~~~~~~iGG~~lt~~l~~lL~~ 221 (336)
+-+|+|+|.++|.++-+ -+|..- .......++||.++++.|.++|.+
T Consensus 206 ~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~ 255 (409)
T 4gni_A 206 IIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSK 255 (409)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 58999999999999774 333221 112234799999999999998864
No 16
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=98.95 E-value=3.5e-08 Score=98.64 Aligned_cols=93 Identities=15% Similarity=0.205 Sum_probs=78.2
Q ss_pred CceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHHcCC-------CeEEEEeeCCCcEEEEEEe--CCEE-
Q psy3377 127 HPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAFANGR-------ATGLVFDSGATHTSAIPVH--DGYV- 196 (336)
Q Consensus 127 ~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s~g~-------~tglVVDiG~~~t~v~pV~--dG~~- 196 (336)
..+++|.|...+..+|+.+.+ .++..|++.+.++++|.+|++++|. .+.+|+|+|++++.|+.+- +|..
T Consensus 140 ~~~VitVPa~f~~~qr~a~~~-A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~ 218 (554)
T 1yuw_A 140 TNAVVTVPAYFNDSQRQATKD-AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFE 218 (554)
T ss_dssp CEEEEEECTTCCHHHHHHHHH-HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred CeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEE
Confidence 578999999999999988866 6688999999999999999998874 4689999999999999776 6754
Q ss_pred eccceEEecchHHHHHHHHHHHHH
Q psy3377 197 LTHAIAKSPLGGDYLTMQCKQFLQ 220 (336)
Q Consensus 197 ~~~~~~~~~iGG~~lt~~l~~lL~ 220 (336)
+........+||+++++.|.++|.
T Consensus 219 v~a~~g~~~lGG~d~d~~l~~~l~ 242 (554)
T 1yuw_A 219 VKSTAGDTHLGGEDFDNRMVNHFI 242 (554)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHH
Confidence 333445578999999999988875
No 17
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=98.86 E-value=4.2e-08 Score=99.04 Aligned_cols=95 Identities=15% Similarity=0.172 Sum_probs=76.3
Q ss_pred CCceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHHcCCC------eEEEEeeCCCcEEEEEEe------C
Q psy3377 126 YHPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAFANGRA------TGLVFDSGATHTSAIPVH------D 193 (336)
Q Consensus 126 ~~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s~g~~------tglVVDiG~~~t~v~pV~------d 193 (336)
-..+++|.|...+..+|+.+.+. .+..|+..+.++++|.+|++++|.. +-+|+|+|++++.|+.+- +
T Consensus 135 v~~~VitVPa~f~d~qr~a~~~A-~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~ 213 (605)
T 2kho_A 135 VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGE 213 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTS
T ss_pred CcEEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCC
Confidence 35689999999999999887665 5778999999999999999998753 479999999999998876 3
Q ss_pred CEE-eccceEEecchHHHHHHHHHHHHHh
Q psy3377 194 GYV-LTHAIAKSPLGGDYLTMQCKQFLQE 221 (336)
Q Consensus 194 G~~-~~~~~~~~~iGG~~lt~~l~~lL~~ 221 (336)
|.. +.......++||.++++.|.++|.+
T Consensus 214 g~~~v~a~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 2kho_A 214 KTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp CEEEEEEEEEESSCSGGGTHHHHHHHHHH
T ss_pred CeEEEEEECCCCCccHHHHHHHHHHHHHH
Confidence 433 2222344689999999999988754
No 18
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=98.76 E-value=9.7e-08 Score=97.46 Aligned_cols=93 Identities=13% Similarity=0.234 Sum_probs=76.6
Q ss_pred CceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHHcCC------------CeEEEEeeCCCcEEEEEEe--
Q psy3377 127 HPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAFANGR------------ATGLVFDSGATHTSAIPVH-- 192 (336)
Q Consensus 127 ~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s~g~------------~tglVVDiG~~~t~v~pV~-- 192 (336)
..+++|.|...+..+|+.+.+ ..+..|+..+.++++|.+|++++|. .+.+|+|+|++++.|+.+-
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~-Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~ 217 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIAD-AARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK 217 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHH-HHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence 578999999999999988876 5578899999999999999987642 3689999999999998775
Q ss_pred CCEE-eccceEEecchHHHHHHHHHHHHH
Q psy3377 193 DGYV-LTHAIAKSPLGGDYLTMQCKQFLQ 220 (336)
Q Consensus 193 dG~~-~~~~~~~~~iGG~~lt~~l~~lL~ 220 (336)
+|.. +.....-..+||+++++.|.++|.
T Consensus 218 ~g~~~V~a~~gd~~lGG~d~D~~l~~~l~ 246 (675)
T 3d2f_A 218 KGQLKVLGTACDKHFGGRDFDLAITEHFA 246 (675)
T ss_dssp TTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred CCeEEEEEEcCCCCccHHHHHHHHHHHHH
Confidence 6654 333334578999999999999885
No 19
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=98.65 E-value=8.7e-07 Score=83.60 Aligned_cols=198 Identities=11% Similarity=0.087 Sum_probs=122.1
Q ss_pred ceEEEecCCceEEEeeeCCCCCeEEccCCceeecCCCccccCCCCCCCCCCCCCC--cccCCCCc-eEecchhhhcccCC
Q psy3377 14 GALVFDVGSQSLRVGYAQEDSPKAEIPAVVGVVEDGGQTASIDTPMDVDVKPDTN--NVTASGNK-YFIDTNALYVARKG 90 (336)
Q Consensus 14 ~~vViD~Gs~~~kaG~age~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~vG~~~~~~~~~~ 90 (336)
-.|-||+|-+++|+ ..+. =.+.|||.++.........+ ..+....+.. ..+..... |++|+.|....+.
T Consensus 5 ~iigiD~G~~~~K~-~~~~--~~~~fPS~v~~~~~~~~~l~----~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~- 76 (355)
T 3js6_A 5 YVMALDFGNGFVKG-KIND--EKFVIPSRIGRKTNENNQLK----GFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNT- 76 (355)
T ss_dssp EEEEEEECSSEEEE-EETT--EEEEEESEEEECCSSCCSST----TTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSC-
T ss_pred EEEEEEcCCCcEEE-ecCC--eEEEeceeeeecccCccccc----ccccCCCCceEEEEecCCeEEEEEchhhhhcCcc-
Confidence 36889999999995 4444 25789999986543321110 0001000000 11223467 8999988543222
Q ss_pred eEEeccc-cCCcccCHHHHHHHHHHHhh---cccCCCCCCCceEEEeCCCCCHHHH-HHHHHHHHhh-----------cC
Q psy3377 91 MEIQSYM-KEGMIEDWDLFEKVLDYTYS---KCIESGSEYHPVLMSEAPWNIRSKR-EKLLELMFEK-----------YN 154 (336)
Q Consensus 91 ~~l~~pi-~~G~i~n~d~~e~i~~~~~~---~~L~~~~~~~pvllte~~~~~~~~r-~~l~e~lFE~-----------~~ 154 (336)
..+.. .+....+ +....++..++. ..+.-+..+-.+++..|.-.....| +++.+.+... +.
T Consensus 77 --~~~~~~~~~k~~~-~~~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~ 153 (355)
T 3js6_A 77 --GKDTASTNDRYDI-KSFKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTIN 153 (355)
T ss_dssp --CEECCCSTTGGGS-HHHHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEE
T ss_pred --cccccccCCcccC-HHHHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEE
Confidence 12222 3344444 333333333432 1121111123466666665544455 5677766532 23
Q ss_pred CCeEEEehhHHHHHHHcC-----------CCeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHHHHHHHHHHhC
Q psy3377 155 VPAFFLVKNAVLAAFANG-----------RATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQCKQFLQEN 222 (336)
Q Consensus 155 vp~v~~~~~~~la~~s~g-----------~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~l~~lL~~~ 222 (336)
+..+.+.++++.|+++.+ ...-+|||+|+++|.++.+.+|.++......+++||..+++.+.+.|+++
T Consensus 154 I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 154 VKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 468999999999999875 34678999999999999999999998888889999999999999999875
No 20
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=98.63 E-value=7.6e-07 Score=89.84 Aligned_cols=113 Identities=14% Similarity=0.132 Sum_probs=81.7
Q ss_pred HHHHHHHHHHhh---cccCCCCCCCceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHHcCC------CeE
Q psy3377 106 DLFEKVLDYTYS---KCIESGSEYHPVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAFANGR------ATG 176 (336)
Q Consensus 106 d~~e~i~~~~~~---~~L~~~~~~~pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s~g~------~tg 176 (336)
+....+|+++.. ..|+. .-..+++|.|...+..+|+.+ .-..+..|+.-+.++++|.+|++++|. .+-
T Consensus 114 ei~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qr~a~-~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~v 190 (605)
T 4b9q_A 114 QISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQRQAT-KDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTI 190 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHTS--CCCEEEEEECTTCCHHHHHHH-HHHHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEE
T ss_pred HHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHHHHH-HHHHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEE
Confidence 334445554432 23443 235789999999999999776 455677899999999999999998864 356
Q ss_pred EEEeeCCCcEEEEEEeCCE----E---eccceEEecchHHHHHHHHHHHHHh
Q psy3377 177 LVFDSGATHTSAIPVHDGY----V---LTHAIAKSPLGGDYLTMQCKQFLQE 221 (336)
Q Consensus 177 lVVDiG~~~t~v~pV~dG~----~---~~~~~~~~~iGG~~lt~~l~~lL~~ 221 (336)
+|+|+|++++.++-+--+. . +.....-..+||.++++.|.++|.+
T Consensus 191 lV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 4b9q_A 191 AVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp EEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred EEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHH
Confidence 8999999999998775433 1 1122233679999999999888754
No 21
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.50 E-value=4.8e-07 Score=84.44 Aligned_cols=189 Identities=11% Similarity=0.116 Sum_probs=120.5
Q ss_pred CCceEEEecCCceEEEeee--C---CCCCeEEccCCceeecCCCccccCCCCCCCCCCCCCCcccCCCCceEecchhhhc
Q psy3377 12 EIGALVFDVGSQSLRVGYA--Q---EDSPKAEIPAVVGVVEDGGQTASIDTPMDVDVKPDTNNVTASGNKYFIDTNALYV 86 (336)
Q Consensus 12 ~~~~vViD~Gs~~~kaG~a--g---e~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~ 86 (336)
+.-.|-||+|-+++|+-.. | +..-+..|||.++....... . ...........++.|++|+.+..
T Consensus 6 ~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~-~---------~~~~~~~v~~~G~~Y~vG~~a~~- 74 (329)
T 4apw_A 6 NEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYI-D---------IEGNSHKIELDGKEYLIGEQGVE- 74 (329)
T ss_dssp CEEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESC-C---------CCCSCEEEECSSSEEEESCCSSS-
T ss_pred CceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccc-c---------CCCCceEEEECCEEEEeCccccc-
Confidence 3346899999999999653 2 12245779999986543210 0 00000011233578899987531
Q ss_pred ccCCeEEeccccCCcccCHHHHHHHHHHHhhcccCCCC-CCCceEEEeCCCCC--HHHHHHHHHHHHhh-----------
Q psy3377 87 ARKGMEIQSYMKEGMIEDWDLFEKVLDYTYSKCIESGS-EYHPVLMSEAPWNI--RSKREKLLELMFEK----------- 152 (336)
Q Consensus 87 ~~~~~~l~~pi~~G~i~n~d~~e~i~~~~~~~~L~~~~-~~~pvllte~~~~~--~~~r~~l~e~lFE~----------- 152 (336)
+-..... +-+....++-.++...+.... .+-.+++.-|...- .+.|+++.+.+-..
T Consensus 75 --------~~~~~~k--~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~ 144 (329)
T 4apw_A 75 --------DSSETSK--TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKE 144 (329)
T ss_dssp --------CSGGGCC--CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCC
T ss_pred --------ccccCCc--CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEE
Confidence 1111112 223455555566644454321 22345555554322 23567777766531
Q ss_pred --cCCCeEEEehhHHHHHHHcC----CCeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHHHHHHHHHHh
Q psy3377 153 --YNVPAFFLVKNAVLAAFANG----RATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQCKQFLQE 221 (336)
Q Consensus 153 --~~vp~v~~~~~~~la~~s~g----~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~l~~lL~~ 221 (336)
+.+..+.+.++++.+++... ..+-+|||+|+++|.++.+.+|.++......+++||..+++.+.+.|++
T Consensus 145 ~~i~I~~v~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 145 YSFEITDITIKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EEEEEEEEEEEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred EEEEEeEEEEEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 23467999999999998862 3567999999999999999999998777788999999999999998876
No 22
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=98.47 E-value=5.9e-07 Score=83.33 Aligned_cols=190 Identities=13% Similarity=0.048 Sum_probs=108.0
Q ss_pred eEEEecCCceEEEeeeCCCCCeEEc--cCCceeecCCCccccCCCCCCCCCCCCCCcccCCCCceEecchhhhcccCCeE
Q psy3377 15 ALVFDVGSQSLRVGYAQEDSPKAEI--PAVVGVVEDGGQTASIDTPMDVDVKPDTNNVTASGNKYFIDTNALYVARKGME 92 (336)
Q Consensus 15 ~vViD~Gs~~~kaG~age~~P~~~~--ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~ 92 (336)
.+.||+|++++|+.+..++.....+ |+++... .... . +..........+..+.+|..+..
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~~~~s~~~~~~~-~~~~-~---------~~~~~~~~~~~g~~y~vg~~a~~------- 63 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIKQHISPNSFKRE-WAVS-F---------GDKKVFNYTLNGEQYSFDPISPD------- 63 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEEEEEEECCEESS-CCCC-S---------SSCCCCEEEETTEEEEECTTCBS-------
T ss_pred eEEEecCCccceEEEecCCCEEEEEecCceeecc-cccc-c---------CCCceeEEEECCEEEEEcccccc-------
Confidence 4789999999999985444333344 4433211 1100 0 00000111112346778866421
Q ss_pred EeccccCCcccCHHHHHHHHHHHhhcccCCCCCCCceEEEeCCC--CC---HHHHHHHHHHH-----------HhhcCCC
Q psy3377 93 IQSYMKEGMIEDWDLFEKVLDYTYSKCIESGSEYHPVLMSEAPW--NI---RSKREKLLELM-----------FEKYNVP 156 (336)
Q Consensus 93 l~~pi~~G~i~n~d~~e~i~~~~~~~~L~~~~~~~pvllte~~~--~~---~~~r~~l~e~l-----------FE~~~vp 156 (336)
.......+.......+-.+. +.+. ..+..+.+..+++.-|.. .. +..++.+.+.+ .+.+++.
T Consensus 64 ~~~t~~~~~~~~~~~l~~i~-~aL~-~~~~~~~~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 141 (320)
T 2zgy_A 64 AVVTTNIAWQYSDVNVVAVH-HALL-TSGLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIK 141 (320)
T ss_dssp CCCSCCSGGGGSHHHHHHHH-HHHH-HHSCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEE
T ss_pred cccCcCCCccchHHHHHHHH-HHHH-HcCCCCceEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEE
Confidence 11122223222333333333 3432 233333334577777753 22 11112222222 2345567
Q ss_pred eEEEehhHHHHHHHcC-----CCeEEEEeeCCCcEEEEEEeCCEE-eccceEEecchHHHHHHHHHHHHHhCCc
Q psy3377 157 AFFLVKNAVLAAFANG-----RATGLVFDSGATHTSAIPVHDGYV-LTHAIAKSPLGGDYLTMQCKQFLQENNI 224 (336)
Q Consensus 157 ~v~~~~~~~la~~s~g-----~~tglVVDiG~~~t~v~pV~dG~~-~~~~~~~~~iGG~~lt~~l~~lL~~~~~ 224 (336)
.+.+.+++++|+++.+ ..+.+|||+|+++|.++.+.+|.+ +.......++||.++++.+.+.|.+++.
T Consensus 142 ~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~ 215 (320)
T 2zgy_A 142 DVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLART 215 (320)
T ss_dssp EEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCSB
T ss_pred EEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcCC
Confidence 8999999999998763 347899999999999999998876 4434567799999999999999875543
No 23
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=98.44 E-value=6.9e-06 Score=77.60 Aligned_cols=74 Identities=18% Similarity=0.108 Sum_probs=61.3
Q ss_pred HHHHHHHHHhhcCCCeEEEehhHHHHHHHcC------C-CeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHHHH
Q psy3377 142 REKLLELMFEKYNVPAFFLVKNAVLAAFANG------R-ATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQ 214 (336)
Q Consensus 142 r~~l~e~lFE~~~vp~v~~~~~~~la~~s~g------~-~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~ 214 (336)
.+.+ .-+++..|+.-..+..+|+++++++| + ...+|||+|+++|.++.+.+|.++ ....+++||+++|+.
T Consensus 153 v~~~-~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~--~~~~~~~GG~~i~~~ 229 (377)
T 2ych_A 153 VAGV-LEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPL--AVRVLTLSGKDFTEA 229 (377)
T ss_dssp HHHH-HHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEE--EEEEESCSHHHHHHH
T ss_pred HHHH-HHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEE--EEEeeechHHHHHHH
Confidence 3443 44568899999999999999988764 2 345999999999999999999987 467789999999999
Q ss_pred HHHH
Q psy3377 215 CKQF 218 (336)
Q Consensus 215 l~~l 218 (336)
+.+.
T Consensus 230 i~~~ 233 (377)
T 2ych_A 230 IARS 233 (377)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8763
No 24
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=97.22 E-value=0.001 Score=63.93 Aligned_cols=80 Identities=18% Similarity=0.128 Sum_probs=65.1
Q ss_pred CHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHHcCCC-----eEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHH
Q psy3377 138 IRSKREKLLELMFEKYNVPAFFLVKNAVLAAFANGRA-----TGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLT 212 (336)
Q Consensus 138 ~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s~g~~-----tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt 212 (336)
++..-+.+ .-+++..|..-..+..+|++++++.... ..+|||+|+++|.++.+.+|.+. ....+++||+++|
T Consensus 166 ~~~~v~n~-~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~--~~~~i~~GG~~it 242 (419)
T 4a2a_A 166 PLKVYEMF-YNFLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPI--KISYVPVGMKHVI 242 (419)
T ss_dssp EHHHHHHH-HHHHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEE--EEEEESCCHHHHH
T ss_pred eHHHHHHH-HHHHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEE--EEEecccHHHHHH
Confidence 34444444 3446778888899999999999988652 58999999999999999999988 4677999999999
Q ss_pred HHHHHHHH
Q psy3377 213 MQCKQFLQ 220 (336)
Q Consensus 213 ~~l~~lL~ 220 (336)
+.+.+.|.
T Consensus 243 ~dIa~~l~ 250 (419)
T 4a2a_A 243 KDVSAVLD 250 (419)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHC
Confidence 99987653
No 25
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.44 E-value=0.027 Score=51.83 Aligned_cols=75 Identities=17% Similarity=0.103 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHH-------cC-CCeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHH
Q psy3377 138 IRSKREKLLELMFEKYNVPAFFLVKNAVLAAFA-------NG-RATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGD 209 (336)
Q Consensus 138 ~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s-------~g-~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~ 209 (336)
...+++.+++.+-+..|++ +-+++..-=|.|+ .+ ..+++|||+|.++|.++-.-+|.+. ....+++|+-
T Consensus 95 ~A~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v 171 (315)
T 1t6c_A 95 RAKNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIV 171 (315)
T ss_dssp TSTTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHH
T ss_pred cCcCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHH
Confidence 3446677888888888885 6666654333332 24 5689999999999999999888876 5778999999
Q ss_pred HHHHHH
Q psy3377 210 YLTMQC 215 (336)
Q Consensus 210 ~lt~~l 215 (336)
.+++.+
T Consensus 172 ~l~e~~ 177 (315)
T 1t6c_A 172 NLTETF 177 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998875
No 26
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=95.83 E-value=0.053 Score=53.29 Aligned_cols=73 Identities=12% Similarity=0.097 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhhcCCCeEEEehhH---HHHHHH----cCC-CeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHH
Q psy3377 140 SKREKLLELMFEKYNVPAFFLVKNA---VLAAFA----NGR-ATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYL 211 (336)
Q Consensus 140 ~~r~~l~e~lFE~~~vp~v~~~~~~---~la~~s----~g~-~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~l 211 (336)
.+++.+.+.+-+..|++ +-+++.. .++..+ ... ..++|||||.++|.++-.-++.+. ....+++|.-.+
T Consensus 96 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl 172 (513)
T 1u6z_A 96 LNATDFLKRAEKVIPYP-IEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSF 172 (513)
T ss_dssp TTHHHHHHHHTTTCSSC-EEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHH
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHHH
Confidence 45677778888888985 6666554 333222 122 279999999999999988888876 577899999998
Q ss_pred HHHH
Q psy3377 212 TMQC 215 (336)
Q Consensus 212 t~~l 215 (336)
++.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 27
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.75 E-value=0.026 Score=51.92 Aligned_cols=73 Identities=18% Similarity=0.181 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhhcCCCeEEEehhH---HHHHHH----cC--CCeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHH
Q psy3377 140 SKREKLLELMFEKYNVPAFFLVKNA---VLAAFA----NG--RATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDY 210 (336)
Q Consensus 140 ~~r~~l~e~lFE~~~vp~v~~~~~~---~la~~s----~g--~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~ 210 (336)
.+++.+.+.+-+.+|++ +-+++.. .++.++ .. ...++|||+|.++|.++-+-++.+. ....+++|.-.
T Consensus 89 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vr 165 (315)
T 3mdq_A 89 SNKQVLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEIL--WKQSFEIGGQR 165 (315)
T ss_dssp TTHHHHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEE--EEEEESCCHHH
T ss_pred cCHHHHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEe--eeEEEechhhH
Confidence 45567777777888885 6665443 332222 22 3579999999999999999998877 57789999988
Q ss_pred HHHHH
Q psy3377 211 LTMQC 215 (336)
Q Consensus 211 lt~~l 215 (336)
+++.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 88754
No 28
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=95.41 E-value=0.051 Score=53.33 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHhhcCCCeEEEehhH---HHHHHH----cCCCeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHH
Q psy3377 140 SKREKLLELMFEKYNVPAFFLVKNA---VLAAFA----NGRATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLT 212 (336)
Q Consensus 140 ~~r~~l~e~lFE~~~vp~v~~~~~~---~la~~s----~g~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt 212 (336)
.+++.+.+.+-+.+|++ +-+++.. .++..+ .....++|||||.++|.++-+-+|.+. ....+++|.-.++
T Consensus 100 ~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~ 176 (508)
T 3hi0_A 100 ENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCG--EGITLPLGGLRLS 176 (508)
T ss_dssp TTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEEC--CCEEESCCHHHHH
T ss_pred cCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeee--eEEEecceEEehh
Confidence 45667777778888886 6666543 333222 234578999999999999999999887 6778999998888
Q ss_pred HH
Q psy3377 213 MQ 214 (336)
Q Consensus 213 ~~ 214 (336)
+.
T Consensus 177 e~ 178 (508)
T 3hi0_A 177 EQ 178 (508)
T ss_dssp HH
T ss_pred hc
Confidence 74
No 29
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=95.00 E-value=0.028 Score=52.30 Aligned_cols=75 Identities=17% Similarity=0.114 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHhhcCCCeEEEehhH---HHHHHHc----C----CCeEEEEeeCCCcEEEEEEeC--CEEe--ccceEEe
Q psy3377 140 SKREKLLELMFEKYNVPAFFLVKNA---VLAAFAN----G----RATGLVFDSGATHTSAIPVHD--GYVL--THAIAKS 204 (336)
Q Consensus 140 ~~r~~l~e~lFE~~~vp~v~~~~~~---~la~~s~----g----~~tglVVDiG~~~t~v~pV~d--G~~~--~~~~~~~ 204 (336)
.+++.+++.+-+.+|++ +-+++.. .++..+. . ...++|||+|.++|.++-+.+ +.+. ......+
T Consensus 102 ~N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Sl 180 (343)
T 3cer_A 102 ENREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSM 180 (343)
T ss_dssp TTHHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEE
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEE
Confidence 45667777777878875 5555543 4444332 2 256999999999999988766 3321 1256789
Q ss_pred cchHHHHHHHH
Q psy3377 205 PLGGDYLTMQC 215 (336)
Q Consensus 205 ~iGG~~lt~~l 215 (336)
++|+..+++.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 99999998865
No 30
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=90.37 E-value=0.56 Score=45.99 Aligned_cols=57 Identities=23% Similarity=0.174 Sum_probs=47.0
Q ss_pred hhHHHHHHHc----CC-CeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHHHHHHHHHH
Q psy3377 162 KNAVLAAFAN----GR-ATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQCKQFLQ 220 (336)
Q Consensus 162 ~~~~la~~s~----g~-~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~l~~lL~ 220 (336)
-+|.+|.+++ ++ .-..+||+|.++|++.-+.+|..+ ....+++||+.+|..+..-|.
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv--~a~~ip~gG~~VT~DIA~~Lg 451 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDI--IATHLAGAGDMVTMIIARELG 451 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCE--EEEEEECSHHHHHHHHHHHHT
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhC
Confidence 6677777765 33 356788999999999999999988 678899999999998877764
No 31
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=90.21 E-value=0.56 Score=46.08 Aligned_cols=57 Identities=23% Similarity=0.179 Sum_probs=46.9
Q ss_pred hhHHHHHHHc----CC-CeEEEEeeCCCcEEEEEEeCCEEeccceEEecchHHHHHHHHHHHHH
Q psy3377 162 KNAVLAAFAN----GR-ATGLVFDSGATHTSAIPVHDGYVLTHAIAKSPLGGDYLTMQCKQFLQ 220 (336)
Q Consensus 162 ~~~~la~~s~----g~-~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~iGG~~lt~~l~~lL~ 220 (336)
-+|.+|.+++ ++ .-..+||+|.++|++.-+.+|..+ ....+++||+.+|..+..-|.
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv--~a~~ip~gG~~VT~DIA~~Lg 453 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQI--TAVHLAGAGNMVSLLIKTELG 453 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCE--EEEEEECCHHHHHHHHHHHHT
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhC
Confidence 5677777765 33 356788999999999999999988 678899999999998877764
No 32
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=89.35 E-value=0.36 Score=44.39 Aligned_cols=26 Identities=31% Similarity=0.574 Sum_probs=23.8
Q ss_pred CeEEEEeeCCCcEEEEEEeCCEEecc
Q psy3377 174 ATGLVFDSGATHTSAIPVHDGYVLTH 199 (336)
Q Consensus 174 ~tglVVDiG~~~t~v~pV~dG~~~~~ 199 (336)
.++|+||||..+|.++||.+|.++..
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~g 152 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVAE 152 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECCC
T ss_pred CCEEEEEcCcchhhhhhhcCCeeccc
Confidence 57999999999999999999999753
No 33
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=83.16 E-value=19 Score=31.70 Aligned_cols=18 Identities=33% Similarity=0.576 Sum_probs=15.5
Q ss_pred EEEecCCceEEEeeeCCC
Q psy3377 16 LVFDVGSQSLRVGYAQED 33 (336)
Q Consensus 16 vViD~Gs~~~kaG~age~ 33 (336)
++||+|-.++|.|+-.++
T Consensus 3 L~IDIGNT~ik~gl~~~~ 20 (268)
T 2h3g_X 3 FVLDVGNTNAVLGVFEEG 20 (268)
T ss_dssp EEEEECSSEEEEEEEETT
T ss_pred EEEEECcCcEEEEEEECC
Confidence 789999999999988543
No 34
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=78.54 E-value=34 Score=30.06 Aligned_cols=19 Identities=32% Similarity=0.448 Sum_probs=16.3
Q ss_pred eEEEecCCceEEEeeeCCC
Q psy3377 15 ALVFDVGSQSLRVGYAQED 33 (336)
Q Consensus 15 ~vViD~Gs~~~kaG~age~ 33 (336)
-++||+|..++|+|+-.++
T Consensus 4 lL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 4899999999999998553
No 35
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=78.19 E-value=0.43 Score=47.29 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=0.0
Q ss_pred CCCeEEECCCcceeeecCccccccccccccccc
Q psy3377 291 LPPSHYEFPNGYHQDFGCRALPYSRGSVVQNIA 323 (336)
Q Consensus 291 ~~~~~y~LPDg~~i~l~~Erf~~~E~lF~p~~~ 323 (336)
.....|++|||+.+.++.|||.+||.||+|+..
T Consensus 409 ~~~~~~~~p~g~~~~~~~e~~~~pe~lf~p~~~ 441 (593)
T 4fo0_A 409 ADRKSASKPIGFEGDLRGQSSDLPERLHSQEVD 441 (593)
T ss_dssp ---------------------------------
T ss_pred cccccccCCCCcccccccccccCchhccCcccc
Confidence 445789999999999999999999999999754
No 36
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=71.58 E-value=50 Score=28.60 Aligned_cols=27 Identities=22% Similarity=0.329 Sum_probs=19.4
Q ss_pred CCeEEEEeeCCCcEEEEEEeCCEEeccc
Q psy3377 173 RATGLVFDSGATHTSAIPVHDGYVLTHA 200 (336)
Q Consensus 173 ~~tglVVDiG~~~t~v~pV~dG~~~~~~ 200 (336)
....+|||+|...|--+- -+|.-+-..
T Consensus 121 ~~~~iVvD~GTA~T~d~v-~~g~~lGG~ 147 (249)
T 3bex_A 121 GKNGIIIDMGTATTVDLV-VNGSYEGGA 147 (249)
T ss_dssp CSCEEEEEESSEEEEEEE-ETTEEEEEE
T ss_pred CCCEEEEEcCCceEEEEE-eCCeEeeEE
Confidence 467999999997665444 787766443
No 37
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=66.75 E-value=79 Score=29.03 Aligned_cols=53 Identities=25% Similarity=0.340 Sum_probs=40.1
Q ss_pred HHHHHHHhhcCCCeEEEehhHHHHHHH---cC-----------------CCeEEEEeeCCCcEEEEEEeCCEEec
Q psy3377 144 KLLELMFEKYNVPAFFLVKNAVLAAFA---NG-----------------RATGLVFDSGATHTSAIPVHDGYVLT 198 (336)
Q Consensus 144 ~l~e~lFE~~~vp~v~~~~~~~la~~s---~g-----------------~~tglVVDiG~~~t~v~pV~dG~~~~ 198 (336)
.+.+.|-+.|++| |++.+++-+++++ .| ..+-++|-+|.+. -..-|++|.++.
T Consensus 99 ~l~~~L~~~~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtGI-G~givi~G~l~~ 171 (366)
T 3mcp_A 99 ALGPFLEDIFGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTGF-GAGVVIDGELLR 171 (366)
T ss_dssp CHHHHHHHHHCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSSE-EEEEEETTEECC
T ss_pred CHHHHHHHHHCCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCcc-eEEEEECCEEec
Confidence 4455666678999 9999999998875 23 4688999999864 466677999875
No 38
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=61.89 E-value=8.7 Score=35.49 Aligned_cols=100 Identities=11% Similarity=0.042 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCceEEEeCC---CCCHHHHHHHHHHHHhhc-------CCCeEEEehhH---HHH----
Q psy3377 105 WDLFEKVLDYTYSKCIESGSEYHPVLMSEAP---WNIRSKREKLLELMFEKY-------NVPAFFLVKNA---VLA---- 167 (336)
Q Consensus 105 ~d~~e~i~~~~~~~~L~~~~~~~pvllte~~---~~~~~~r~~l~e~lFE~~-------~vp~v~~~~~~---~la---- 167 (336)
.+.+++.++ -|.+ +. .-...|+.+.-.. ..+...++.+.+.+-+.+ +. .+.+++.. .++
T Consensus 52 ~~~~~~~l~-~f~~-~~-~~~~~~v~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g~-~v~VIsG~eEa~~~~~gv 127 (353)
T 3aap_A 52 SVTIDAYLT-MLLA-DA-PIHNIPVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQLV-EAKTITGNDEALFDWLAV 127 (353)
T ss_dssp HHHHHHHHH-HHHT-TC-SCCSEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEEE-EEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHH-HH-hcCCCcEEEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCCC-eEEECChHHHHHHHHHHH
Confidence 456666666 3322 11 1122344443321 123444677777776666 33 45555543 222
Q ss_pred HHHcC------CCeEEEEeeCCCcEEEEEEeC--CEEeccceEEecchH
Q psy3377 168 AFANG------RATGLVFDSGATHTSAIPVHD--GYVLTHAIAKSPLGG 208 (336)
Q Consensus 168 ~~s~g------~~tglVVDiG~~~t~v~pV~d--G~~~~~~~~~~~iGG 208 (336)
.|..+ ..+.+|||+|.++|.++=... +.+.......+++||
T Consensus 128 ~~~l~~~~~~~~~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~ 176 (353)
T 3aap_A 128 NYKLDTLKSVQNKSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYG 176 (353)
T ss_dssp HHHTTCSSSCCSSCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETT
T ss_pred HHHhhhccccccccEEEEEeCCCceEEEEecCCccccCCCceEEEEECC
Confidence 23333 246999999999999987644 333333345566665
No 39
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=59.30 E-value=26 Score=30.67 Aligned_cols=53 Identities=13% Similarity=0.208 Sum_probs=43.1
Q ss_pred HHHHHHHhhcCCCeEEEehhHHHHHHHc-----CCCeEEEEeeCCCcEEEEEEeCCEEecc
Q psy3377 144 KLLELMFEKYNVPAFFLVKNAVLAAFAN-----GRATGLVFDSGATHTSAIPVHDGYVLTH 199 (336)
Q Consensus 144 ~l~e~lFE~~~vp~v~~~~~~~la~~s~-----g~~tglVVDiG~~~t~v~pV~dG~~~~~ 199 (336)
.+.+.| +.|++| +++.+++-+++++. +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 86 ~l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 143 (292)
T 2gup_A 86 SWYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHRG 143 (292)
T ss_dssp BHHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEECC
T ss_pred CHHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEec
Confidence 466777 899998 89999999999883 5679999999987 45667789988753
No 40
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=57.05 E-value=99 Score=26.94 Aligned_cols=68 Identities=18% Similarity=0.042 Sum_probs=47.7
Q ss_pred eEEEeCCCCCHHHHHHHHHHHHhhcCC-CeEEEehhHHHHHHH-cCCCeEEEEeeCCCcEEEEEEeCCEEe
Q psy3377 129 VLMSEAPWNIRSKREKLLELMFEKYNV-PAFFLVKNAVLAAFA-NGRATGLVFDSGATHTSAIPVHDGYVL 197 (336)
Q Consensus 129 vllte~~~~~~~~r~~l~e~lFE~~~v-p~v~~~~~~~la~~s-~g~~tglVVDiG~~~t~v~pV~dG~~~ 197 (336)
+-+.-|-.. +.....+.+.|=+.|+. -.+.+.+++.+++++ .|..++++|=+|.+.--..-+.+|...
T Consensus 63 igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 63 VYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp EEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEE
T ss_pred EEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEE
Confidence 555555443 22233566666667775 259999999999998 577889999999887544455699885
No 41
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=46.00 E-value=62 Score=28.56 Aligned_cols=52 Identities=21% Similarity=0.270 Sum_probs=40.0
Q ss_pred HHHHHHhhcCCCeEEEehhHHHHHHHc-------CCCeEEEEeeCCCcEEEEEEeCCEEec
Q psy3377 145 LLELMFEKYNVPAFFLVKNAVLAAFAN-------GRATGLVFDSGATHTSAIPVHDGYVLT 198 (336)
Q Consensus 145 l~e~lFE~~~vp~v~~~~~~~la~~s~-------g~~tglVVDiG~~~t~v~pV~dG~~~~ 198 (336)
+.+.+=+.|++| +++.+++-+++++. +..+.++|-+|.+ +-..-|.+|.++.
T Consensus 100 l~~~l~~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~ 158 (326)
T 2qm1_A 100 VKEQIESALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLH 158 (326)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHHHHHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEee
Confidence 344444557888 88999999998762 4578999999998 5577778998876
No 42
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=42.83 E-value=1.7e+02 Score=25.50 Aligned_cols=86 Identities=10% Similarity=0.117 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhhcccCCCCCCC---ceEEEeCCCCCHHHHHHHHHHHHhhc--CCCeEEEehhHHHHHHHc-CCCeEEE
Q psy3377 105 WDLFEKVLDYTYSKCIESGSEYH---PVLMSEAPWNIRSKREKLLELMFEKY--NVPAFFLVKNAVLAAFAN-GRATGLV 178 (336)
Q Consensus 105 ~d~~e~i~~~~~~~~L~~~~~~~---pvllte~~~~~~~~r~~l~e~lFE~~--~vp~v~~~~~~~la~~s~-g~~tglV 178 (336)
|+.+...++.++. ..+.++.+- .+-+.-|-......... +=+.| +.| +++.+++-+++++. +..++++
T Consensus 53 ~~~l~~~i~~~l~-~~~~~~~~i~~~~igig~pG~v~~~~~~~----l~~~~~~~~p-v~v~NDa~aaa~ge~~~~~~v~ 126 (305)
T 1zc6_A 53 WQAVLSTLEAAFQ-QAGLPAAPASACAIGLGLSGVHNRQWAGE----FESQAPGFAR-LSLATDGYTTLLGAHGGQPGII 126 (305)
T ss_dssp HHHHHHHHHHHHH-HTTCCCCCGGGEEEEEEESCCCTTSHHHH----HHHTCCCCSE-EEEECHHHHHHHHHTTTSSEEE
T ss_pred HHHHHHHHHHHHH-hcCCChhhhccceEEEEecCCCchHHHHH----HHHhCCCCce-EEEECCHHHHHHhhcCCCCeEE
Confidence 4555566666653 344444432 35565665433322222 33345 454 99999999999984 5678999
Q ss_pred EeeCCCcEEEEEEe-CCEEe
Q psy3377 179 FDSGATHTSAIPVH-DGYVL 197 (336)
Q Consensus 179 VDiG~~~t~v~pV~-dG~~~ 197 (336)
|-+|.+.. ..-+. +|...
T Consensus 127 v~~GTGig-g~~i~~~G~~~ 145 (305)
T 1zc6_A 127 VALGTGSI-GEALYPDGSHR 145 (305)
T ss_dssp EEESSSEE-EEEECTTSCEE
T ss_pred EEecCCeE-EEEEeCCCcEE
Confidence 99998864 33344 88754
No 43
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=42.51 E-value=78 Score=27.39 Aligned_cols=51 Identities=20% Similarity=0.174 Sum_probs=39.7
Q ss_pred HHHHHHhhcCCCeEEEehhHHHHHHHc-------CCCeEEEEeeCCCcEEEEEEeCCEEec
Q psy3377 145 LLELMFEKYNVPAFFLVKNAVLAAFAN-------GRATGLVFDSGATHTSAIPVHDGYVLT 198 (336)
Q Consensus 145 l~e~lFE~~~vp~v~~~~~~~la~~s~-------g~~tglVVDiG~~~t~v~pV~dG~~~~ 198 (336)
+.+.+=+.|++| +++.+++-+++++. +. +.++|.+|.+ .-..-|.+|.++.
T Consensus 88 l~~~l~~~~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii~~G~l~~ 145 (289)
T 2aa4_A 88 LVKTLEQLTNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVVSGCKLLT 145 (289)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEEETTEEEC
T ss_pred hHHHHHHHHCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEEECCEEee
Confidence 445555567888 89999999998863 34 8999999998 5667788999885
No 44
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=41.20 E-value=21 Score=35.59 Aligned_cols=45 Identities=13% Similarity=0.219 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCceEEEeCCCCCHHHHHHHHHHHHhhcCC
Q psy3377 105 WDLFEKVLDYTYSKCIESGSEYHPVLMSEAPWNIRSKREKLLELMFEKYNV 155 (336)
Q Consensus 105 ~d~~e~i~~~~~~~~L~~~~~~~pvllte~~~~~~~~r~~l~e~lFE~~~v 155 (336)
-|.++.|=+|+|. .++.||||+-...++..+++++|++|-|.||=
T Consensus 235 ~~v~~~I~~~AF~------~s~yPvilslE~Hc~~~qQ~~ma~~~~~~~gd 279 (624)
T 1djx_A 235 CDVLRAIRDYAFK------ASPYPVILSLENHCSLEQQRVMARHLRAILGP 279 (624)
T ss_dssp HHHHHHHHHHTTT------SCSSCEEEEEEEECCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhccc------CCCCCEEEEecccCCHHHHHHHHHHHHHHHhh
Confidence 3566777778875 47999999999999999999999999888764
No 45
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=40.33 E-value=84 Score=27.87 Aligned_cols=52 Identities=13% Similarity=0.179 Sum_probs=40.4
Q ss_pred HHHHHHhhcCCCeEEEehhHHHHHHH-------cCCCeEEEEeeCCCcEEEEEEeCCEEec
Q psy3377 145 LLELMFEKYNVPAFFLVKNAVLAAFA-------NGRATGLVFDSGATHTSAIPVHDGYVLT 198 (336)
Q Consensus 145 l~e~lFE~~~vp~v~~~~~~~la~~s-------~g~~tglVVDiG~~~t~v~pV~dG~~~~ 198 (336)
+.+.+-+.|++| +++.+++-+++++ .+..+.++|-+|.+ .-..-|.+|.++.
T Consensus 88 l~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~ 146 (321)
T 3vgl_A 88 LKDKVEQRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRR 146 (321)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHHhhhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEec
Confidence 344555667898 9999999999886 24578999999987 5667788999875
No 46
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=35.98 E-value=32 Score=35.35 Aligned_cols=45 Identities=11% Similarity=0.169 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCceEEEeCCCC-CHHHHHHHHHHHHhhcCC
Q psy3377 105 WDLFEKVLDYTYSKCIESGSEYHPVLMSEAPWN-IRSKREKLLELMFEKYNV 155 (336)
Q Consensus 105 ~d~~e~i~~~~~~~~L~~~~~~~pvllte~~~~-~~~~r~~l~e~lFE~~~v 155 (336)
-|.++.|=+|+|. .++.||||+-...+ +..+++++|++|-|.||=
T Consensus 385 ~~v~~~I~~~AF~------~S~yPvIlslE~Hc~s~~qQ~~ma~~~~~~~Gd 430 (799)
T 2zkm_X 385 KEAIEAIAESAFK------TSPYPIILSFENHVDSPRQQAKMAEYCRTIFGD 430 (799)
T ss_dssp HHHHHHHHHHTTS------SCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhccc------CCCCCEEEEccccCCCHHHHHHHHHHHHHHhhh
Confidence 3566777778875 48999999999999 999999999999888764
No 47
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=34.76 E-value=37 Score=24.77 Aligned_cols=32 Identities=6% Similarity=0.161 Sum_probs=24.5
Q ss_pred cCHHHHHHHHHHHhhcccCCCCCCCceEEEeCC
Q psy3377 103 EDWDLFEKVLDYTYSKCIESGSEYHPVLMSEAP 135 (336)
Q Consensus 103 ~n~d~~e~i~~~~~~~~L~~~~~~~pvllte~~ 135 (336)
.--+.+..+|+|+-.+.|. +|++...++++..
T Consensus 28 sr~evvk~lW~YIK~n~Lq-dp~~k~~I~cD~~ 59 (93)
T 1v31_A 28 TRPRIIAAIWHYVKARKLQ-NPNDPSFFNCDAA 59 (93)
T ss_dssp CSHHHHHHHHHHHHHTTCB-CSSCSSEEECCSH
T ss_pred CHHHHHHHHHHHHHHccCc-CcccCceeehhHH
Confidence 3457889999999876665 5778888888753
No 48
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=33.34 E-value=1.2e+02 Score=26.81 Aligned_cols=74 Identities=15% Similarity=0.230 Sum_probs=51.8
Q ss_pred HHHHHHhhc-CCCeEEEehhHHHHHHH-------cCCCeEEEEeeCCCcEEEEEEeCCEEeccce---------E-----
Q psy3377 145 LLELMFEKY-NVPAFFLVKNAVLAAFA-------NGRATGLVFDSGATHTSAIPVHDGYVLTHAI---------A----- 202 (336)
Q Consensus 145 l~e~lFE~~-~vp~v~~~~~~~la~~s-------~g~~tglVVDiG~~~t~v~pV~dG~~~~~~~---------~----- 202 (336)
+.+.+-+.| ++| +++.+++-+++++ .+..+.++|-+|.+ .-..-|.+|.++.... .
T Consensus 109 l~~~l~~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~G~~g~aGEiGh~~~~~~g 186 (321)
T 3r8e_A 109 IVEILRSEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFIGGRGNGTEVGHMLTTRGK 186 (321)
T ss_dssp HHHHHHHHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCCTTSCCCCGGGCBCTTSS
T ss_pred HHHHHHHHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEecCCCCCCcccccccCCCCC
Confidence 345556678 887 8999999998875 24578999999987 5677788999886221 1
Q ss_pred --EecchHHHHHHHHHHHHH
Q psy3377 203 --KSPLGGDYLTMQCKQFLQ 220 (336)
Q Consensus 203 --~~~iGG~~lt~~l~~lL~ 220 (336)
..-.++..|.+.+.+.+.
T Consensus 187 clE~~~S~~al~~~~~~~~~ 206 (321)
T 3r8e_A 187 SLENQVGINHLIAYTHEQLA 206 (321)
T ss_dssp BSHHHHSHHHHHHHHHHHHH
T ss_pred cHHHhcCHHHHHHHHHHHhh
Confidence 112456777777766554
No 49
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=33.27 E-value=1.2e+02 Score=26.77 Aligned_cols=53 Identities=15% Similarity=0.020 Sum_probs=39.9
Q ss_pred HHHHHHhhcCCCeEEEehhHHHHHHHc-------CCCeEEEEeeCCCcEEEEEEeCCEEecc
Q psy3377 145 LLELMFEKYNVPAFFLVKNAVLAAFAN-------GRATGLVFDSGATHTSAIPVHDGYVLTH 199 (336)
Q Consensus 145 l~e~lFE~~~vp~v~~~~~~~la~~s~-------g~~tglVVDiG~~~t~v~pV~dG~~~~~ 199 (336)
+.+.+=+.|++| +++.+++-+++++. +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 112 l~~~l~~~~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 171 (327)
T 2ap1_A 112 LRADLSARLDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLVLNGKPITG 171 (327)
T ss_dssp HHHHHHHHHTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEEETTEEECC
T ss_pred hHHHHHHHHCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEEECCEEeec
Confidence 334445557888 99999999998862 3578899999987 45667889988763
No 50
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=33.12 E-value=23 Score=25.90 Aligned_cols=31 Identities=3% Similarity=0.107 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCceEEEeCCC
Q psy3377 105 WDLFEKVLDYTYSKCIESGSEYHPVLMSEAPW 136 (336)
Q Consensus 105 ~d~~e~i~~~~~~~~L~~~~~~~pvllte~~~ 136 (336)
-+.+..+|+|+-.+.|. +|.+...++++..+
T Consensus 30 ~evvk~lW~YIK~n~Lq-dp~~k~~I~cD~~L 60 (93)
T 1uhr_A 30 PVIIQALWQYIKTHKLQ-DPHEREFVLCDKYL 60 (93)
T ss_dssp HHHHHHHHHHHHHTTCB-CSSCSSEECCCTTH
T ss_pred HHHHHHHHHHHHhccCC-CccccceeechHHH
Confidence 46789999999876665 57888888888654
No 51
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=31.56 E-value=42 Score=34.56 Aligned_cols=45 Identities=13% Similarity=0.156 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCceEEEeCCCCCHHHHHHHHHHHHhhcCC
Q psy3377 105 WDLFEKVLDYTYSKCIESGSEYHPVLMSEAPWNIRSKREKLLELMFEKYNV 155 (336)
Q Consensus 105 ~d~~e~i~~~~~~~~L~~~~~~~pvllte~~~~~~~~r~~l~e~lFE~~~v 155 (336)
-|.++.|=+|+|. .++.||||+-...++..+.+++|++|-|.||-
T Consensus 394 ~~v~~~I~~~AF~------~S~yPvIlslE~Hc~~~qQ~~ma~~~~~~~Gd 438 (816)
T 3qr0_A 394 KDVVYAIAESAFK------VSDYPVILSFENHCSVAQQKLLAQYCNEAFGE 438 (816)
T ss_dssp HHHHHHHHHHTTS------SCCSCEEEEEEECCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhccc------CCCCCEEEEEecCCCHHHHHHHHHHHHHHhhh
Confidence 4677788888885 47899999999999999999999999998875
No 52
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=29.81 E-value=1.2e+02 Score=27.10 Aligned_cols=50 Identities=14% Similarity=0.230 Sum_probs=38.3
Q ss_pred HHHHhhcCCCeEEEehhHHHHHHHc-------CCCeEEEEeeCCCcEEEEEEeCCEEec
Q psy3377 147 ELMFEKYNVPAFFLVKNAVLAAFAN-------GRATGLVFDSGATHTSAIPVHDGYVLT 198 (336)
Q Consensus 147 e~lFE~~~vp~v~~~~~~~la~~s~-------g~~tglVVDiG~~~t~v~pV~dG~~~~ 198 (336)
+.+-+.|++| +++.+++-+++++. +..+.++|-+|.+ .-..-|.+|.++.
T Consensus 125 ~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii~~G~l~~ 181 (343)
T 2yhw_A 125 TPLSDTLHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGIIHQHELIH 181 (343)
T ss_dssp HHHHHHHCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHHHHCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEEECCEEec
Confidence 4444556888 88999999988863 4568999999987 5567778998765
No 53
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=28.86 E-value=1.5e+02 Score=27.51 Aligned_cols=52 Identities=21% Similarity=0.243 Sum_probs=40.0
Q ss_pred HHHHHHhhcCCCeEEEehhHHHHHHHc-------CCCeEEEEeeCCCcEEEEEEeCCEEec
Q psy3377 145 LLELMFEKYNVPAFFLVKNAVLAAFAN-------GRATGLVFDSGATHTSAIPVHDGYVLT 198 (336)
Q Consensus 145 l~e~lFE~~~vp~v~~~~~~~la~~s~-------g~~tglVVDiG~~~t~v~pV~dG~~~~ 198 (336)
+.+.|=+.|++| +++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.++.
T Consensus 200 l~~~L~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 258 (429)
T 1z05_A 200 LGPEIYKATGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIVLDGRVLQ 258 (429)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHHHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEEECCEEee
Confidence 344555567888 89999999998863 4578999999987 5577778998775
No 54
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=28.29 E-value=1.4e+02 Score=26.09 Aligned_cols=49 Identities=24% Similarity=0.156 Sum_probs=31.9
Q ss_pred EEEEeeCCCcEEEEEEeCCEEeccceEEe-cchHHHHHHHHHHHHHhCCc
Q psy3377 176 GLVFDSGATHTSAIPVHDGYVLTHAIAKS-PLGGDYLTMQCKQFLQENNI 224 (336)
Q Consensus 176 glVVDiG~~~t~v~pV~dG~~~~~~~~~~-~iGG~~lt~~l~~lL~~~~~ 224 (336)
=|+||+|...+...-+-++..+....... ....+.+...|.+++...+.
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~ 53 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNC 53 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 38999999888776666666553322222 24566777777887776554
No 55
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=28.04 E-value=1.5e+02 Score=27.14 Aligned_cols=52 Identities=19% Similarity=0.216 Sum_probs=39.8
Q ss_pred HHHHHHhhcCCCeEEEehhHHHHHHHc-------CCCeEEEEeeCCCcEEEEEEeCCEEec
Q psy3377 145 LLELMFEKYNVPAFFLVKNAVLAAFAN-------GRATGLVFDSGATHTSAIPVHDGYVLT 198 (336)
Q Consensus 145 l~e~lFE~~~vp~v~~~~~~~la~~s~-------g~~tglVVDiG~~~t~v~pV~dG~~~~ 198 (336)
+.+.+=+.|++| +++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.++.
T Consensus 178 l~~~l~~~~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 236 (406)
T 1z6r_A 178 LGEALEQHTGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVITDGHLLH 236 (406)
T ss_dssp HHHHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEETT
T ss_pred HHHHHHHHHCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEEECCEEee
Confidence 344455567888 88999999998762 4578999999987 5577788998875
No 56
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=27.55 E-value=1.5e+02 Score=26.29 Aligned_cols=53 Identities=13% Similarity=0.044 Sum_probs=40.5
Q ss_pred HHHHHHhhcCCCeEEEehhHHHHHHHc-------CCCeEEEEeeCCCcEEEEEEeCCEEecc
Q psy3377 145 LLELMFEKYNVPAFFLVKNAVLAAFAN-------GRATGLVFDSGATHTSAIPVHDGYVLTH 199 (336)
Q Consensus 145 l~e~lFE~~~vp~v~~~~~~~la~~s~-------g~~tglVVDiG~~~t~v~pV~dG~~~~~ 199 (336)
+.+.|-+.|++| +++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 112 l~~~l~~~~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 171 (327)
T 4db3_A 112 LRADLEAKIGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLIYEGKVFSG 171 (327)
T ss_dssp HHHHHHHHHSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHHHHCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEEECCEEeec
Confidence 445555677898 99999999998863 4578899999987 55667789988753
No 57
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=26.96 E-value=2.1e+02 Score=24.34 Aligned_cols=54 Identities=22% Similarity=0.326 Sum_probs=40.1
Q ss_pred HHHHHHHhhcCCCeEEEehhHHHHHHH-----cCC--C-eEEEEeeCCCcEEEEEEeCCEEecc
Q psy3377 144 KLLELMFEKYNVPAFFLVKNAVLAAFA-----NGR--A-TGLVFDSGATHTSAIPVHDGYVLTH 199 (336)
Q Consensus 144 ~l~e~lFE~~~vp~v~~~~~~~la~~s-----~g~--~-tglVVDiG~~~t~v~pV~dG~~~~~ 199 (336)
.+.+.+=+.|++| +++.+++-+++++ .++ . +.++|-+|.+ .-..-|.+|.++..
T Consensus 105 ~l~~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv~~G~l~~G 166 (267)
T 1woq_A 105 DIDALLTARLGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFIFDGKLVPN 166 (267)
T ss_dssp BHHHHHHHHHTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEEETTEEETT
T ss_pred CHHHHHHHHHCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEEECCEEccC
Confidence 4445555667998 9999999999886 222 3 5678899986 66777889998764
No 58
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=25.47 E-value=74 Score=30.28 Aligned_cols=55 Identities=11% Similarity=0.047 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhhcC---C--CeEEEehhHHHHH-------HHcC---------------CCeEEEEeeCCCcEEEEEEeC
Q psy3377 141 KREKLLELMFEKYN---V--PAFFLVKNAVLAA-------FANG---------------RATGLVFDSGATHTSAIPVHD 193 (336)
Q Consensus 141 ~r~~l~e~lFE~~~---v--p~v~~~~~~~la~-------~s~g---------------~~tglVVDiG~~~t~v~pV~d 193 (336)
.++.+.+.+-+.++ + -.+.+++..-=+. |..| ..+..|+|+|.++|.++=..+
T Consensus 130 n~~~~L~~v~~~l~~~~f~~~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~~ 209 (456)
T 3cj1_A 130 ATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFETT 209 (456)
T ss_dssp HHHHHHHHHHHHHTTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEECC
T ss_pred HHHHHHHHHHHHHhhCCCCcCceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEeccC
Confidence 45666666666553 2 2556665433222 3334 346789999999999998766
Q ss_pred CE
Q psy3377 194 GY 195 (336)
Q Consensus 194 G~ 195 (336)
..
T Consensus 210 ~~ 211 (456)
T 3cj1_A 210 SP 211 (456)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 59
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=25.45 E-value=3.2e+02 Score=23.42 Aligned_cols=61 Identities=25% Similarity=0.274 Sum_probs=41.2
Q ss_pred ceEEEeCCCCCHHHHHHHHHHHHhhcCCCeEEEehhHHHHHHHc-CCCeEEEEeeCCCcEEEEEEeCCE
Q psy3377 128 PVLMSEAPWNIRSKREKLLELMFEKYNVPAFFLVKNAVLAAFAN-GRATGLVFDSGATHTSAIPVHDGY 195 (336)
Q Consensus 128 pvllte~~~~~~~~r~~l~e~lFE~~~vp~v~~~~~~~la~~s~-g~~tglVVDiG~~~t~v~pV~dG~ 195 (336)
.+-+..|-..+......+.+.+=+ |+.| +++.+++-+++++. ...++++|-+|.+. |.+|.
T Consensus 62 ~igi~~~G~~~~~~~~~l~~~l~~-~~~p-v~v~ND~~aaa~~e~~~~~~v~l~~GTG~-----i~~g~ 123 (299)
T 2e2o_A 62 VVGMGVAGLDSKFDWENFTPLASL-IAPK-VIIQHDGVIALFAETLGEPGVVVIAGTGS-----VVEGY 123 (299)
T ss_dssp EEEEEETTCCSHHHHHHHHHHHTT-SSSE-EEEEEHHHHHHHHHHTTSCEEEEEESSSE-----EEEEE
T ss_pred EEEEEcCCCCchhHHHHHHHHHHh-CCCC-EEEeCcHHHHHhhccCCCCeEEEEecCCE-----EEEEE
Confidence 455566655444444455555545 7765 88899999998875 35788999999983 55565
No 60
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=23.74 E-value=2.3e+02 Score=24.66 Aligned_cols=53 Identities=26% Similarity=0.317 Sum_probs=39.7
Q ss_pred HHHHHHhhcCCCeEEEehhHHHHHHHc-------CCCeEEEEeeCCCcEEEEEEeCCEEecc
Q psy3377 145 LLELMFEKYNVPAFFLVKNAVLAAFAN-------GRATGLVFDSGATHTSAIPVHDGYVLTH 199 (336)
Q Consensus 145 l~e~lFE~~~vp~v~~~~~~~la~~s~-------g~~tglVVDiG~~~t~v~pV~dG~~~~~ 199 (336)
+.+.+-+.|++| +++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 90 l~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~g~l~~G 149 (302)
T 3vov_A 90 IRRILEEATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVVLGGRVLRG 149 (302)
T ss_dssp HHHHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred hHHHHHHhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEEECCEEeeC
Confidence 345555677898 88999999887753 4578999999987 44556779988753
No 61
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=23.57 E-value=2.4e+02 Score=24.50 Aligned_cols=52 Identities=17% Similarity=0.152 Sum_probs=39.6
Q ss_pred HHHHHHhhcCCCeEEEehhHHHHHHHc-------CCCeEEEEeeCCCcEEEEEEeCCEEec
Q psy3377 145 LLELMFEKYNVPAFFLVKNAVLAAFAN-------GRATGLVFDSGATHTSAIPVHDGYVLT 198 (336)
Q Consensus 145 l~e~lFE~~~vp~v~~~~~~~la~~s~-------g~~tglVVDiG~~~t~v~pV~dG~~~~ 198 (336)
+.+.+-+.|++| +++.+++-+++++- +..+.++|-+|.+. -..-|.+|.++.
T Consensus 89 l~~~l~~~~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~giv~~G~l~~ 147 (297)
T 4htl_A 89 LKEWLEAETGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGI-GGGIFSNGELVR 147 (297)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEEEETTEECC
T ss_pred HHHHHHHHHCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcce-EEEEEECCEEEe
Confidence 344555667898 99999998888752 45789999999874 566677999876
No 62
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=23.43 E-value=1.8e+02 Score=26.42 Aligned_cols=52 Identities=21% Similarity=0.240 Sum_probs=39.4
Q ss_pred HHHHHHhhcCCCeEEEehhHHHHHHHc---C--CCeEEEEeeCCCcEEEEEEeCCEEec
Q psy3377 145 LLELMFEKYNVPAFFLVKNAVLAAFAN---G--RATGLVFDSGATHTSAIPVHDGYVLT 198 (336)
Q Consensus 145 l~e~lFE~~~vp~v~~~~~~~la~~s~---g--~~tglVVDiG~~~t~v~pV~dG~~~~ 198 (336)
+.+.+=+.|++| +++.+++-+++++- | +.+.++|-+|.+. -..-|.+|.++.
T Consensus 180 l~~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~v~l~~GtGi-G~giv~~G~l~~ 236 (380)
T 2hoe_A 180 LANLLKEKYGIE-VWVENDADMGAVGEKWYTKRDDSFAWILTGKGI-GAGIIIDGELYR 236 (380)
T ss_dssp HHHHHHHHHCSE-EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSC-EEEEEETTEECC
T ss_pred hHHHHHHHhCCC-EEEechHHHHHHHHHHhCCCCCcEEEEEeCCce-EEEEEECCEEec
Confidence 344455567887 89999999998762 3 3889999999974 467778998765
No 63
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=21.58 E-value=4.1e+02 Score=23.24 Aligned_cols=89 Identities=11% Similarity=0.116 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHhhcccCCCCC-C-CceEEEeCCCCCHHHHHHHHHHHHhhcC---CCeEEEehhHHHHHHHcCCCeEEEE
Q psy3377 105 WDLFEKVLDYTYSKCIESGSE-Y-HPVLMSEAPWNIRSKREKLLELMFEKYN---VPAFFLVKNAVLAAFANGRATGLVF 179 (336)
Q Consensus 105 ~d~~e~i~~~~~~~~L~~~~~-~-~pvllte~~~~~~~~r~~l~e~lFE~~~---vp~v~~~~~~~la~~s~g~~tglVV 179 (336)
|+.+...++.++. ..+..+. . ..+-+.-|-.........+.+.+=+.|+ .| +++.+++-+++++....++++|
T Consensus 49 ~~~i~~~i~~~~~-~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~~~~~~v~v 126 (347)
T 2ch5_A 49 VERINEMVNRAKR-KAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATATPDGGVVL 126 (347)
T ss_dssp HHHHHHHHHHHHH-HHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHHH-hcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhhCCCCcEEE
Confidence 4555566666553 3344332 2 3455667766555555566677767776 65 8899999999988644678999
Q ss_pred eeCCCcEEEEEE-eCCEE
Q psy3377 180 DSGATHTSAIPV-HDGYV 196 (336)
Q Consensus 180 DiG~~~t~v~pV-~dG~~ 196 (336)
-+|.+.-- ..| .+|..
T Consensus 127 ~~GTGig~-~~v~~~G~~ 143 (347)
T 2ch5_A 127 ISGTGSNC-RLINPDGSE 143 (347)
T ss_dssp EESSSEEE-EEECTTSCE
T ss_pred EEcCCcee-EEEcCCCCE
Confidence 99987543 334 35543
Done!