BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3380
(290 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1XHB|A Chain A, The Crystal Structure Of Udp-Galnac: Polypeptide Alpha-N-
Acetylgalactosaminyltransferase-T1
Length = 472
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 159/314 (50%), Gaps = 46/314 (14%)
Query: 4 CEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQ 63
CE WL+PLL + + VV P+I I DDTFE + GGF+W L
Sbjct: 125 CECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEY-------MAGSDMTYGGFNWKLN 177
Query: 64 FNWHAIPERERKRHK-NAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELS 122
F W+ +P+RE R K + PV TPTMAGGLFSID+ +F+++GTYD+G DIWGGENLE+S
Sbjct: 178 FRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEIS 237
Query: 123 FKFNWH--AIPERERKRHKNAAEPVWTP-TMAGGLFSIDKAFFEKLGTYDSGFDIWGGEN 179
F+ W E H TP T GG I +L ++W E
Sbjct: 238 FRI-WQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLA------EVWMDEF 290
Query: 180 LELSF-------KGDFGDVTSRKELRRNLGCKSFKWYL-----------------EVSND 215
+ K D+GD++SR LRR L CK F WYL E+ N
Sbjct: 291 KNFFYIISPGVTKVDYGDISSRLGLRRKLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNV 350
Query: 216 WSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDYA--GGDVILY 273
+ C+D+ + + + VG++ CH GGNQ + + + EIR D+ CLD + G V +
Sbjct: 351 ETNQCLDNMARKEN--EKVGIFNCHGMGGNQVFSYTANKEIRTDDLCLDVSKLNGPVTML 408
Query: 274 PCHGSKGNQYFEYD 287
CH KGNQ +EYD
Sbjct: 409 KCHHLKGNQLWEYD 422
>pdb|2FFU|A Chain A, Crystal Structure Of Human Ppgalnact-2 Complexed With Udp
And Ea2
pdb|2FFV|A Chain A, Human Ppgalnact-2 Complexed With Manganese And Udp
pdb|2FFV|B Chain B, Human Ppgalnact-2 Complexed With Manganese And Udp
Length = 501
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 146/315 (46%), Gaps = 51/315 (16%)
Query: 4 CEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQ 63
CE + WL+PLL+ +A + + VVSP+I I D F+ L GGFDWNL
Sbjct: 157 CECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLK-------GGFDWNLV 209
Query: 64 FNW-HAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELS 122
F W + PE+ R R N P+ TP +AGGLF +DK +FE+LG YD D+WGGENLE+S
Sbjct: 210 FKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEIS 269
Query: 123 FKF-----NWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGG 177
F+ + IP P P +G +F+ + ++W
Sbjct: 270 FRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTR---------RAAEVWMD 320
Query: 178 ENLELSFKG-------DFGDVTSRKELRRNLGCKSFKWYLEV----------------SN 214
E + +G++ SR ELR+ L CK FKWYLE +
Sbjct: 321 EYKNFYYAAVPSARNVPYGNIQSRLELRKKLSCKPFKWYLENVYPELRVPDHQDIAFGAL 380
Query: 215 DWSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACL---DYAGGDVI 271
C+D+ D VG+Y CH GGNQ W ++K ++ + CL D A G +I
Sbjct: 381 QQGTNCLDTLGHFAD--GVVGVYECHNAGGNQEWALTKEKSVKHMDLCLTVVDRAPGSLI 438
Query: 272 -LYPCHGSKGNQYFE 285
L C + Q +E
Sbjct: 439 KLQGCRENDSRQKWE 453
>pdb|2D7I|A Chain A, Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac And
Mn2+
pdb|2D7R|A Chain A, Crystal Structure Of Pp-galnac-t10 Complexed With
Galnac-ser On Lectin Domain
Length = 570
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 139/327 (42%), Gaps = 61/327 (18%)
Query: 4 CEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQ 63
CE WL PLLD +ARN +V P+I I D F T + G FDW +
Sbjct: 207 CEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYE------TQAGDAMRGAFDWEMY 260
Query: 64 FNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSF 123
+ IP +K + ++P +P MAGGLF++D+ +F +LG YD G +IWGGE E+SF
Sbjct: 261 YKRIPIPPELQK--ADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISF 318
Query: 124 KF-----NWHAIPERERKRHKNAAEPVWTP---TMAGGLFSIDKAFFEKLGTYDSGFDIW 175
K IP P P ++A L + + + ++ Y
Sbjct: 319 KVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEY---IYQR 375
Query: 176 GGENLELSFKGDFGDVTSRKELRRNLGCKSFKWYL----------------------EVS 213
E LS GDV +K+LR +L CKSFKW++ E+
Sbjct: 376 RPEYRHLS----AGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIR 431
Query: 214 NDWSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFW------MMSKHGEIRRDEA------ 261
N +G+C D+ K + P+ L C + G W + +IR +
Sbjct: 432 NVGTGLCADT--KHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKF 489
Query: 262 CLDYAG--GDVILYPCHGSKGNQYFEY 286
C D V LY CH KGNQ ++Y
Sbjct: 490 CFDAISHTSPVTLYDCHSMKGNQLWKY 516
>pdb|2VLC|A Chain A, Crystal Structure Of Natural Cinnamomin (Isoform Iii)
pdb|2VLC|B Chain B, Crystal Structure Of Natural Cinnamomin (Isoform Iii)
Length = 570
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 217 SGMCIDSACKPTDMHKPVGLYPCHKQGG-NQFWMMSKHGEIRRDEACLD---YAGGD-VI 271
+G+C+ + P+ L+PC + NQ W + + G IR + CL Y+ GD V+
Sbjct: 324 NGLCVRVRDGKYNNGNPIQLWPCKQNSDVNQLWTLRRDGTIRSNGKCLTTNGYSAGDYVM 383
Query: 272 LYPCH 276
+Y C
Sbjct: 384 IYDCR 388
>pdb|1XYF|A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis
pdb|1XYF|B Chain B, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis
pdb|1ISV|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Xylose
pdb|1ISV|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Xylose
pdb|1ISW|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Xylobiose
pdb|1ISW|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Xylobiose
pdb|1ISX|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Xylotriose
pdb|1ISX|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Xylotriose
pdb|1ISY|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Glucose
pdb|1ISY|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Glucose
pdb|1ISZ|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Galactose
pdb|1ISZ|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Galactose
pdb|1IT0|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Lactose
pdb|1IT0|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Lactose
pdb|1V6U|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With 2(2)-Alpha-L-
Arabinofuranosyl-Xylobiose
pdb|1V6U|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With 2(2)-Alpha-L-
Arabinofuranosyl-Xylobiose
pdb|1V6V|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With 3(2)-Alpha-L-
Arabinofuranosyl-Xylotriose
pdb|1V6V|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With 3(2)-Alpha-L-
Arabinofuranosyl-Xylotriose
pdb|1V6W|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With
2(2)-4-O-Methyl-Alpha- D-Glucuronosyl-Xylobiose
pdb|1V6W|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With
2(2)-4-O-Methyl-Alpha- D-Glucuronosyl-Xylobiose
pdb|1V6X|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With
3(3)-4-O-Methyl-Alpha- D-Glucuronosyl-Xylotriose
pdb|1V6X|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With
3(3)-4-O-Methyl-Alpha- D-Glucuronosyl-Xylotriose
Length = 436
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 217 SGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRR-DEACLDYA----GGDVI 271
SG C+D T V LY CH NQ W + GE+R + CLD A G V
Sbjct: 320 SGRCLDVPNASTTDGTQVQLYDCHS-ATNQQWTYTDAGELRVYGDKCLDAAGTGNGTKVQ 378
Query: 272 LYPCHG 277
+Y C G
Sbjct: 379 IYSCWG 384
>pdb|2D1Z|A Chain A, Crystal Structure Of Catalytic-Site Mutant Xylanase From
Streptomyces Olivaceoviridis E-86
pdb|2D1Z|B Chain B, Crystal Structure Of Catalytic-Site Mutant Xylanase From
Streptomyces Olivaceoviridis E-86
pdb|2D20|A Chain A, Crystal Structure Of Michaelis Complex Of Catalytic-Site
Mutant Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D20|B Chain B, Crystal Structure Of Michaelis Complex Of Catalytic-Site
Mutant Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D22|A Chain A, Crystal Structure Of Covalent Glycosyl-Enzyme Intermediate
Of Catalytic-Site Mutant Xylanase From Streptomyces
Olivaceoviridis E-86
pdb|2D22|B Chain B, Crystal Structure Of Covalent Glycosyl-Enzyme Intermediate
Of Catalytic-Site Mutant Xylanase From Streptomyces
Olivaceoviridis E-86
pdb|2D23|A Chain A, Crystal Structure Of Ep Complex Of Catalytic-Site Mutant
Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D23|B Chain B, Crystal Structure Of Ep Complex Of Catalytic-Site Mutant
Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D24|A Chain A, Crystal Structure Of Es Complex Of Catalytic-Site Mutant
Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D24|B Chain B, Crystal Structure Of Es Complex Of Catalytic-Site Mutant
Xylanase From Streptomyces Olivaceoviridis E-86
Length = 436
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 217 SGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRR-DEACLDYA----GGDVI 271
SG C+D T V LY CH NQ W + GE+R + CLD A G V
Sbjct: 320 SGRCLDVPNASTTDGTQVQLYDCHS-ATNQQWTYTDAGELRVYGDKCLDAAGTGNGTKVQ 378
Query: 272 LYPCHG 277
+Y C G
Sbjct: 379 IYSCWG 384
>pdb|1RZO|B Chain B, Agglutinin From Ricinus Communis With Galactoaza
pdb|1RZO|D Chain D, Agglutinin From Ricinus Communis With Galactoaza
Length = 262
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 217 SGMCIDSACKPTDMHKPVGLYPCHKQGG-NQFWMMSKHGEIRRDEACLDYAGG----DVI 271
+G+C+D + P+ L+PC NQ W + K IR + CL + V+
Sbjct: 17 NGLCVDVTGEEFFDGNPIQLWPCKSNTDWNQLWTLRKDSTIRSNGKCLTISKSSPRQQVV 76
Query: 272 LYPC 275
+Y C
Sbjct: 77 IYNC 80
>pdb|2AAI|B Chain B, Crystallographic Refinement Of Ricin To 2.5 Angstroms
pdb|3RTI|B Chain B, Crystal Structure Of Ricin Bound With Formycin
Monophosphate
pdb|3RTJ|B Chain B, Crystal Structure Of Ricin Bound With Dinucleotide Apg
Length = 262
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 217 SGMCIDSACKPTDMHKPVGLYPCHKQG-GNQFWMMSKHGEIRRDEACLDYAGGD----VI 271
+G+C+D + L+PC NQ W + + IR + CL G V+
Sbjct: 17 NGLCVDVRDGRFHNGNAIQLWPCKSNTDANQLWTLKRDNTIRSNGKCLTTYGYSPGVYVM 76
Query: 272 LYPCH 276
+Y C+
Sbjct: 77 IYDCN 81
>pdb|1OQL|B Chain B, Mistletoe Lectin I From Viscum Album Complexed With
Galactose
Length = 263
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 217 SGMCIDSACKPTDMHKPVGLYPCHKQGG-NQFWMMSKHGEIRRDEACLD----YAGGDVI 271
+GMC+D + L+P NQ W + + G IR + +CL AG V+
Sbjct: 18 NGMCVDVRDDDFRDGNQIQLWPSKSNNDPNQLWTIKRDGTIRSNGSCLTTYGYTAGVYVM 77
Query: 272 LYPCH 276
++ C+
Sbjct: 78 IFDCN 82
>pdb|1M2T|B Chain B, Mistletoe Lectin I From Viscum Album In Complex With
Adenine Monophosphate. Crystal Structure At 1.9 A
Resolution
pdb|2R9K|B Chain B, Crystal Structure Of Misteltoe Lectin I In Complex With
Phloretamide
Length = 263
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 217 SGMCIDSACKPTDMH--KPVGLYPCHKQGG-NQFWMMSKHGEIRRDEACLD----YAGGD 269
+GM +D + D H + L+P NQ W + K G IR + +CL AG
Sbjct: 18 NGMTVD--VRDDDFHDGNQIQLWPSKSNNDPNQLWTIKKDGTIRSNGSCLTTYGYTAGVY 75
Query: 270 VILYPCH 276
V+++ C+
Sbjct: 76 VMIFDCN 82
>pdb|3D7W|B Chain B, Mistletoe Lectin I In Complex With Zeatin
Length = 265
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 217 SGMCIDSACKPTDMH--KPVGLYPCHKQGG-NQFWMMSKHGEIRRDEACLD----YAGGD 269
+GM +D + D H + L+P NQ W + K G IR + +CL AG
Sbjct: 18 NGMTVD--VRDDDFHDGNQIQLWPSKSNNDPNQLWTIKKDGTIRSNGSCLTTYGYTAGVY 75
Query: 270 VILYPCH 276
V+++ C+
Sbjct: 76 VMIFDCN 82
>pdb|3O5W|B Chain B, Binding Of Kinetin In The Active Site Of Mistletoe Lectin
I
Length = 263
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 217 SGMCIDSACKPTDMH--KPVGLYPCHKQGG-NQFWMMSKHGEIRRDEACLD----YAGGD 269
+GM +D + D H + L+P NQ W + K G IR + +CL AG
Sbjct: 18 NGMTVD--VRDDDFHDGNQIQLWPSKSNNDPNQLWTIKKDGTIRSNGSCLTTYGYTAGVY 75
Query: 270 VILYPCH 276
V+++ C+
Sbjct: 76 VMIFDCN 82
>pdb|2RG9|B Chain B, Crystal Structure Of Viscum Album Mistletoe Lectin I In
Native State At 1.95 A Resolution, Comparison Of
Structure Active Site Conformation In Ricin And In
Viscumin
Length = 263
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 217 SGMCIDSACKPTDMHKPVGLYPCHKQGG-NQFWMMSKHGEIRRDEACLD----YAGGDVI 271
+GM +D + L+P NQ W + K G IR + +CL AG V+
Sbjct: 18 NGMTVDVRDDDFQDGNQIQLWPSKSNNDPNQLWTIKKDGTIRSNGSCLTTYGYTAGVYVM 77
Query: 272 LYPCH 276
++ C+
Sbjct: 78 IFDCN 82
>pdb|1PUU|B Chain B, Mistletoe Lectin I In Complex With Lactose
Length = 263
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 217 SGMCIDSACKPTDMHKPVGLYPCHKQGG-NQFWMMSKHGEIRRDEACLD----YAGGDVI 271
+GM +D + L+P NQ W + K G IR + +CL AG V+
Sbjct: 18 NGMTVDVRDDDFQDGNQIQLWPSKSNNDPNQLWTIKKDGTIRSNGSCLTTYGYTAGVYVM 77
Query: 272 LYPCH 276
++ C+
Sbjct: 78 IFDCN 82
>pdb|1PUM|B Chain B, Mistletoe Lectin I In Complex With Galactose
pdb|1SZ6|B Chain B, Mistletoe Lectin I From Viscum Album. Crystal Structure At
2.05 A Resolution
Length = 263
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 217 SGMCIDSACKPTDMHKPVGLYPCHKQGG-NQFWMMSKHGEIRRDEACLD----YAGGDVI 271
+GM +D + L+P NQ W + K G IR + +CL AG V+
Sbjct: 18 NGMTVDVRDDDFQDGNQIQLWPSKSNNDPNQLWTIKKDGTIRSNGSCLTTYGYTAGVYVM 77
Query: 272 LYPCH 276
++ C+
Sbjct: 78 IFDCN 82
>pdb|3EIG|A Chain A, Crystal Structure Of A Methotrexate-Resistant Mutant Of
Human Dihydrofolate Reductase
Length = 186
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 97 DKAFFEKLGTYDSGFDIWGGENLELSFKFNWHAIPERER 135
++ +FE++ T S + G +NL + K W +IPE+ R
Sbjct: 30 ERRYFERMTTTSS---VEGKQNLVIMGKKTWFSIPEKNR 65
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.474
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,238,726
Number of Sequences: 62578
Number of extensions: 464005
Number of successful extensions: 970
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 937
Number of HSP's gapped (non-prelim): 32
length of query: 290
length of database: 14,973,337
effective HSP length: 98
effective length of query: 192
effective length of database: 8,840,693
effective search space: 1697413056
effective search space used: 1697413056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)