Your job contains 1 sequence.
>psy3393
MEMAEDGSLSEEIDNAAHARMSAISRSVVPALVPIPHDALDLGSNHSSGKDDDNESIKTE
GLTVIVAPQDDSRDSEILSPGKISPSGISVSVASIMDSSEFRNLHAEPTYQTLTNVNGRL
SPPGYSPSSSYATLTPLQPLPPISTMSDKFAYGHTGNVTGSFTVMQNNIGLGINSHYTYD
KIQMSPPQHYSPNNGLSTIVITQENSPLSPQSTYSQNGLNSPQKSLSPNSYDSPYNQRDL
VDRSVLGGGSQSPTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGITTITPHTVVVSPQTS
PQHSLISNQLQRSDSPGPPKIISQQTATLTLKTVTPTNAVVGAVSLGNSGELEEINTKEL
AQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEP
EFQRMSALRLAGN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3393
(433 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-050208-744 - symbol:onecut3 "one cut homeob... 419 6.2e-55 3
FB|FBgn0028996 - symbol:onecut "onecut" species:7227 "Dro... 430 2.4e-54 2
RGD|2811 - symbol:Onecut1 "one cut homeobox 1" species:10... 439 1.8e-52 2
UNIPROTKB|P70512 - symbol:Onecut1 "Hepatocyte nuclear fac... 439 1.8e-52 2
UNIPROTKB|J3KR63 - symbol:ONECUT2 "One cut domain family ... 418 1.6e-51 2
UNIPROTKB|O95948 - symbol:ONECUT2 "One cut domain family ... 418 1.6e-51 2
UNIPROTKB|F1S1X5 - symbol:ONECUT2 "Uncharacterized protei... 424 2.0e-51 2
MGI|MGI:1891408 - symbol:Onecut2 "one cut domain, family ... 418 1.8e-50 2
RGD|1564677 - symbol:Onecut2 "one cut homeobox 2" species... 418 1.8e-50 2
MGI|MGI:1891409 - symbol:Onecut3 "one cut domain, family ... 403 3.3e-47 3
UNIPROTKB|O60422 - symbol:ONECUT3 "One cut domain family ... 401 2.3e-46 3
UNIPROTKB|E2QWY9 - symbol:ONECUT3 "Uncharacterized protei... 402 3.7e-46 3
UNIPROTKB|F1MXR2 - symbol:ONECUT2 "Uncharacterized protei... 418 3.3e-45 2
UNIPROTKB|F1SDH9 - symbol:ONECUT3 "Uncharacterized protei... 402 2.5e-43 2
UNIPROTKB|I3L6D9 - symbol:ONECUT3 "Uncharacterized protei... 402 6.7e-43 2
UNIPROTKB|Q9UBC0 - symbol:ONECUT1 "Hepatocyte nuclear fac... 443 8.4e-42 1
MGI|MGI:1196423 - symbol:Onecut1 "one cut domain, family ... 439 2.2e-41 1
UNIPROTKB|G3N248 - symbol:ONECUT1 "Uncharacterized protei... 435 5.9e-41 1
UNIPROTKB|F1RZD6 - symbol:ONECUT1 "Uncharacterized protei... 435 5.9e-41 1
UNIPROTKB|E2R096 - symbol:ONECUT1 "Uncharacterized protei... 433 9.6e-41 1
WB|WBGene00015934 - symbol:ceh-48 species:6239 "Caenorhab... 378 1.4e-40 2
ZFIN|ZDB-GENE-020531-1 - symbol:onecutl "one cut domain, ... 356 1.7e-40 2
ZFIN|ZDB-GENE-040426-1469 - symbol:onecut1 "one cut domai... 427 4.2e-40 1
ZFIN|ZDB-GENE-120215-73 - symbol:si:ch1073-41k10.1 "si:ch... 421 1.8e-39 1
UNIPROTKB|F1P9A2 - symbol:ONECUT2 "Uncharacterized protei... 418 3.7e-39 1
RGD|1591005 - symbol:LOC690827 "similar to one cut domain... 403 1.5e-37 1
UNIPROTKB|G3MX15 - symbol:ONECUT3 "Uncharacterized protei... 402 1.9e-37 1
WB|WBGene00000459 - symbol:ceh-38 species:6239 "Caenorhab... 283 1.1e-23 2
WB|WBGene00000444 - symbol:ceh-21 species:6239 "Caenorhab... 218 4.0e-15 1
WB|WBGene00000460 - symbol:ceh-39 species:6239 "Caenorhab... 203 1.1e-13 1
UNIPROTKB|P39881 - symbol:CUX1 "Homeobox protein cut-like... 158 7.0e-09 2
FB|FBgn0004198 - symbol:ct "cut" species:7227 "Drosophila... 169 9.6e-09 1
RGD|620618 - symbol:Cux1 "cut-like homeobox 1" species:10... 158 5.0e-08 1
UNIPROTKB|F1PM17 - symbol:CUX1 "Homeobox protein cut-like... 160 5.8e-08 3
RGD|1305967 - symbol:Cux2 "cut-like homeobox 2" species:1... 159 7.3e-08 1
UNIPROTKB|D4A0B5 - symbol:D4A0B5 "Uncharacterized protein... 159 7.4e-08 1
ZFIN|ZDB-GENE-030131-5868 - symbol:cux1a "cut-like homeob... 157 8.2e-08 2
ZFIN|ZDB-GENE-081104-176 - symbol:cux2b "cut-like homeobo... 157 1.1e-07 1
UNIPROTKB|F1NGM5 - symbol:CUX1 "Uncharacterized protein" ... 158 1.3e-07 3
UNIPROTKB|F1RKF9 - symbol:LOC100622173 "Uncharacterized p... 160 1.3e-07 2
UNIPROTKB|E1BXL9 - symbol:E1BXL9 "Uncharacterized protein... 159 1.4e-07 2
UNIPROTKB|F1N693 - symbol:LOC100848036 "Uncharacterized p... 160 1.7e-07 3
UNIPROTKB|F1MT17 - symbol:CUX2 "Uncharacterized protein" ... 159 2.6e-07 2
UNIPROTKB|E2R1M2 - symbol:CUX2 "Uncharacterized protein" ... 161 3.2e-07 2
UNIPROTKB|F1LM15 - symbol:Cux1 "Homeobox protein cut-like... 160 4.2e-07 3
ZFIN|ZDB-GENE-031204-9 - symbol:cux2a "cut-like homeobox ... 148 4.2e-07 1
UNIPROTKB|F1RMZ4 - symbol:CUX2 "Uncharacterized protein" ... 159 5.8e-07 2
UNIPROTKB|F1LRC5 - symbol:Cux1 "Homeobox protein cut-like... 160 7.6e-07 3
MGI|MGI:107321 - symbol:Cux2 "cut-like homeobox 2" specie... 159 9.6e-07 2
UNIPROTKB|O14529 - symbol:CUX2 "Homeobox protein cut-like... 159 1.1e-06 2
UNIPROTKB|P39880 - symbol:CUX1 "Homeobox protein cut-like... 158 1.5e-06 3
WB|WBGene00017538 - symbol:ceh-49 species:6239 "Caenorhab... 134 5.1e-06 2
WB|WBGene00000464 - symbol:ceh-44 species:6239 "Caenorhab... 140 7.7e-06 1
UNIPROTKB|Q3ZB87 - symbol:SATB2 "DNA-binding protein SATB... 121 3.1e-05 2
UNIPROTKB|C9JR56 - symbol:SATB2 "DNA-binding protein SATB... 121 0.00042 1
UNIPROTKB|E1BZL3 - symbol:SATB2 "Uncharacterized protein"... 121 0.00046 1
UNIPROTKB|J9NRQ8 - symbol:SATB2 "Uncharacterized protein"... 121 0.00046 1
UNIPROTKB|Q9UPW6 - symbol:SATB2 "DNA-binding protein SATB... 121 0.00046 1
MGI|MGI:2679336 - symbol:Satb2 "special AT-rich sequence ... 121 0.00046 1
RGD|1562369 - symbol:Satb2 "SATB homeobox 2" species:1011... 121 0.00046 1
UNIPROTKB|F1Q2V6 - symbol:SATB2 "Uncharacterized protein"... 121 0.00049 1
UNIPROTKB|F1N426 - symbol:SATB2 "Uncharacterized protein"... 121 0.00049 1
>ZFIN|ZDB-GENE-050208-744 [details] [associations]
symbol:onecut3 "one cut homeobox 3" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001889 "liver development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 ZFIN:ZDB-GENE-050208-744
GO:GO:0005634 GO:GO:0043565 GO:GO:0001889 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 CTD:390874
EMBL:BX088720 IPI:IPI00502134 RefSeq:XP_694209.1 UniGene:Dr.95331
Ensembl:ENSDART00000078885 GeneID:565854 KEGG:dre:565854
NextBio:20887777 Bgee:F1Q5P3 Uniprot:F1Q5P3
Length = 451
Score = 419 (152.6 bits), Expect = 6.2e-55, Sum P(3) = 6.2e-55
Identities = 79/85 (92%), Positives = 84/85 (98%)
Query: 347 GNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSG 406
G SG++EEINTKE+AQRI+AELKRYSIPQAIFAQR+LCRSQGTLSDLLRNPKPWSKLKSG
Sbjct: 266 GGSGQVEEINTKEVAQRITAELKRYSIPQAIFAQRILCRSQGTLSDLLRNPKPWSKLKSG 325
Query: 407 RETFRRMWKWLQEPEFQRMSALRLA 431
RETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 326 RETFRRMWKWLQEPEFQRMSALRLA 350
Score = 136 (52.9 bits), Expect = 6.2e-55, Sum P(3) = 6.2e-55
Identities = 56/171 (32%), Positives = 81/171 (47%)
Query: 86 SGISVSVASIMDSS-EFRNLHA--EPTYQTLTNVNGRLXXXXXXXXXXXATLTPLQP-LP 141
S + S+ASI+D + E+R H+ P + +T TLTPLQ LP
Sbjct: 45 SAMVSSMASILDGAGEYRTDHSLSGPLHPAMT----MSCDSSMSLSSTYTTLTPLQHHLP 100
Query: 142 PISTMSDKF-------AYGH-------TGNVTGSFTVMQNNIGLGINS----HYTYDKIQ 183
PIS +SDKF A+ H GNV+GSFT+M+++ GL S HY+ D
Sbjct: 101 PISNVSDKFHHHPHPHAHHHPAHQRLAAGNVSGSFTLMRDDRGLASMSNLYGHYSKDLSG 160
Query: 184 MSPPQHYSP-NNGLSTIVITQENSPLSPQSTYSQNGLNSPQKSLSPNSYDS 233
M PP SP +NGL ++ +Q+ S Y + K +S ++S
Sbjct: 161 MGPP--LSPLSNGLGSLHNSQQTL-----SAYGPSAHLGNDKMISSGGFES 204
Score = 42 (19.8 bits), Expect = 4.0e-45, Sum P(3) = 4.0e-45
Identities = 29/114 (25%), Positives = 46/114 (40%)
Query: 165 MQNNIGLGINSHYTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQSTYSQNGLNSPQK 224
M + + ++S YT ++P QH+ P +S + + P P + +
Sbjct: 77 MSCDSSMSLSSTYT----TLTPLQHHLPP--ISNVSDKFHHHP-HPHAHHHPAHQRLAAG 129
Query: 225 SLSPNSYDSPYNQRDLVDRSVLGG------GSQSPTLSPNE---GSLHSSPTTL 269
++S S+ + R L S L G P LSP GSLH+S TL
Sbjct: 130 NVS-GSFTLMRDDRGLASMSNLYGHYSKDLSGMGPPLSPLSNGLGSLHNSQQTL 182
Score = 41 (19.5 bits), Expect = 6.2e-55, Sum P(3) = 6.2e-55
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 12 EIDNAAHARMSAISRSVV 29
++ N+ HAR SA R++V
Sbjct: 22 DLMNSPHARQSATHRNLV 39
>FB|FBgn0028996 [details] [associations]
symbol:onecut "onecut" species:7227 "Drosophila melanogaster"
[GO:0006351 "transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;NAS;IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0001077 EMBL:AE014135 Gene3D:1.10.260.40 SUPFAM:SSF47413
GeneTree:ENSGT00530000063019 eggNOG:NOG307335 EMBL:AF169227
RefSeq:NP_524842.2 UniGene:Dm.1788 ProteinModelPortal:Q9NJB5
SMR:Q9NJB5 STRING:Q9NJB5 EnsemblMetazoa:FBtr0089104
EnsemblMetazoa:FBtr0310610 GeneID:45816 KEGG:dme:Dmel_CG1922
UCSC:CG1922-RA CTD:45816 FlyBase:FBgn0028996 InParanoid:Q9NJB5
OMA:HTTAMSP OrthoDB:EOG4J9KDS PhylomeDB:Q9NJB5 GenomeRNAi:45816
NextBio:838367 Bgee:Q9NJB5 GermOnline:CG1922 Uniprot:Q9NJB5
Length = 1081
Score = 430 (156.4 bits), Expect = 2.4e-54, Sum P(2) = 2.4e-54
Identities = 99/154 (64%), Positives = 109/154 (70%)
Query: 280 PTMNGITTITPHTVVVSPQTSPQHSLISNQLQRSDSPGPPKIISQQXXXXXXXXXXXXNA 339
P +NG TP +V V Q SP S + N Q S SQQ +
Sbjct: 698 PGING----TPQSVCVIHQQSP--SALGNGFQSS---------SQQAKVSSCASPKGTVS 742
Query: 340 VVGAVS--LGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNP 397
GAVS + NS ++EEINTK+LAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNP
Sbjct: 743 SGGAVSNRIANSSDMEEINTKDLAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNP 802
Query: 398 KPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 431
KPWSKLKSGRETFRRM+KWLQEPEFQRMSALR+A
Sbjct: 803 KPWSKLKSGRETFRRMYKWLQEPEFQRMSALRMA 836
Score = 171 (65.3 bits), Expect = 2.4e-54, Sum P(2) = 2.4e-54
Identities = 60/175 (34%), Positives = 80/175 (45%)
Query: 44 SNHSS-GKDDDNESIKTEGLTVIVAPQD-DSRDSEILSPGKISPSGISVSVASIMDSSEF 101
S HS G D+ + + L+VIV QD D D E G + + DS
Sbjct: 253 STHSEMGLDNGHGEV----LSVIVHSQDSDKEDCEENDDGD-AEGDLENEDDDERDSRSR 307
Query: 102 RNLHAEPTYQTLTNVNGRLXXXXXXXXXXXATLTPLQPLPPISTMSDKFAY-GH-TGNVT 159
L + +YQTLT+VN RL ATLTP+QPLPPISTMS+KFAY GH +G +
Sbjct: 308 EQLLSHSSYQTLTSVNDRLSSPGFSQTSY-ATLTPIQPLPPISTMSEKFAYSGHISGGDS 366
Query: 160 GSFTVMQNNIGLGINS--HYTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQS 212
G V + G G+ T + + S N S++ + S S S
Sbjct: 367 GDTDVNGDGAGGGVVEVGEVTNQSSEATGTVSISSGNATSSVCSNNDCSSFSALS 421
>RGD|2811 [details] [associations]
symbol:Onecut1 "one cut homeobox 1" species:10116 "Rattus
norvegicus" [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001889 "liver development" evidence=ISO] [GO:0001952 "regulation
of cell-matrix adhesion" evidence=ISO] [GO:0002064 "epithelial cell
development" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO;IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0006006 "glucose metabolic process"
evidence=ISO;IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007492 "endoderm
development" evidence=ISO] [GO:0009653 "anatomical structure
morphogenesis" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=ISO] [GO:0030183 "B cell differentiation" evidence=ISO]
[GO:0030335 "positive regulation of cell migration" evidence=ISO]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISO] [GO:0031016 "pancreas
development" evidence=ISO] [GO:0031018 "endocrine pancreas
development" evidence=ISO] [GO:0042384 "cilium assembly"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=ISO;IMP;IDA] [GO:0048536 "spleen development"
evidence=ISO] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
RGD:2811 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0006006
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0001077
Gene3D:1.10.260.40 SUPFAM:SSF47413 eggNOG:NOG307335 CTD:3175
HOGENOM:HOG000232114 HOVERGEN:HBG005981 KO:K08026 EMBL:X96553
EMBL:Y14933 IPI:IPI00189591 IPI:IPI00231378 RefSeq:NP_073162.1
UniGene:Rn.48812 PDB:2D5V PDBsum:2D5V ProteinModelPortal:P70512
SMR:P70512 STRING:P70512 GeneID:25231 KEGG:rno:25231 UCSC:RGD:2811
EvolutionaryTrace:P70512 NextBio:605791 ArrayExpress:P70512
Genevestigator:P70512 GermOnline:ENSRNOG00000008095 Uniprot:P70512
Length = 465
Score = 439 (159.6 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 111/215 (51%), Positives = 131/215 (60%)
Query: 227 SPNSYDSPYNQRDLVDRSVLG-GGSQSPTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGI 285
S N+ +PY+ + V G G S SP GS+H+S L A +PT +
Sbjct: 160 SMNNLYTPYH------KDVAGMGQSLSPLSGSGLGSIHNSQQGLPHYAHPGAAMPTDKML 213
Query: 286 TT--ITPHTVVVSPQTSPQH--SLISNQLQRSDSPG--PPKIISQQXXXXXXXXXXXXN- 338
T H + + QH + + + P P ++ Q N
Sbjct: 214 TPNDFEAHHPAMLGRHGEQHLTPTSAGMVPINGLPPHHPHAHLNAQGHGQLLGTAREPNP 273
Query: 339 AVVGA-VSLG-NSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 396
+V GA VS G NSG++EEINTKE+AQRI+ ELKRYSIPQAIFAQRVLCRSQGTLSDLLRN
Sbjct: 274 SVTGAQVSNGSNSGQMEEINTKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 333
Query: 397 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 431
PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 334 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 368
Score = 122 (48.0 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 38/115 (33%), Positives = 57/115 (49%)
Query: 89 SVSVASIMDS----SEFRNLHAEPTYQTLTNVNGRLXXX-----XXXXXXXXATLTPLQP 139
S+ +AS++D S++ + H P + ++ + TLTPLQP
Sbjct: 52 SMGMASLLDGGSGGSDYHHHHRAPEHSLAGPLHPTMTMACETPPGMSMPTTYTTLTPLQP 111
Query: 140 LPPISTMSDKFAYGH---------------TGNVTGSFTVMQNNIGLG-INSHYT 178
LPPIST+SDKF + H GNV+GSFT+M++ GL +N+ YT
Sbjct: 112 LPPISTVSDKFPHHHHHHHHHHHPHHHQRLAGNVSGSFTLMRDERGLASMNNLYT 166
>UNIPROTKB|P70512 [details] [associations]
symbol:Onecut1 "Hepatocyte nuclear factor 6" species:10116
"Rattus norvegicus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
RGD:2811 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0006006
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0001077
Gene3D:1.10.260.40 SUPFAM:SSF47413 eggNOG:NOG307335 CTD:3175
HOGENOM:HOG000232114 HOVERGEN:HBG005981 KO:K08026 EMBL:X96553
EMBL:Y14933 IPI:IPI00189591 IPI:IPI00231378 RefSeq:NP_073162.1
UniGene:Rn.48812 PDB:2D5V PDBsum:2D5V ProteinModelPortal:P70512
SMR:P70512 STRING:P70512 GeneID:25231 KEGG:rno:25231 UCSC:RGD:2811
EvolutionaryTrace:P70512 NextBio:605791 ArrayExpress:P70512
Genevestigator:P70512 GermOnline:ENSRNOG00000008095 Uniprot:P70512
Length = 465
Score = 439 (159.6 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 111/215 (51%), Positives = 131/215 (60%)
Query: 227 SPNSYDSPYNQRDLVDRSVLG-GGSQSPTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGI 285
S N+ +PY+ + V G G S SP GS+H+S L A +PT +
Sbjct: 160 SMNNLYTPYH------KDVAGMGQSLSPLSGSGLGSIHNSQQGLPHYAHPGAAMPTDKML 213
Query: 286 TT--ITPHTVVVSPQTSPQH--SLISNQLQRSDSPG--PPKIISQQXXXXXXXXXXXXN- 338
T H + + QH + + + P P ++ Q N
Sbjct: 214 TPNDFEAHHPAMLGRHGEQHLTPTSAGMVPINGLPPHHPHAHLNAQGHGQLLGTAREPNP 273
Query: 339 AVVGA-VSLG-NSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 396
+V GA VS G NSG++EEINTKE+AQRI+ ELKRYSIPQAIFAQRVLCRSQGTLSDLLRN
Sbjct: 274 SVTGAQVSNGSNSGQMEEINTKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 333
Query: 397 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 431
PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 334 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 368
Score = 122 (48.0 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 38/115 (33%), Positives = 57/115 (49%)
Query: 89 SVSVASIMDS----SEFRNLHAEPTYQTLTNVNGRLXXX-----XXXXXXXXATLTPLQP 139
S+ +AS++D S++ + H P + ++ + TLTPLQP
Sbjct: 52 SMGMASLLDGGSGGSDYHHHHRAPEHSLAGPLHPTMTMACETPPGMSMPTTYTTLTPLQP 111
Query: 140 LPPISTMSDKFAYGH---------------TGNVTGSFTVMQNNIGLG-INSHYT 178
LPPIST+SDKF + H GNV+GSFT+M++ GL +N+ YT
Sbjct: 112 LPPISTVSDKFPHHHHHHHHHHHPHHHQRLAGNVSGSFTLMRDERGLASMNNLYT 166
>UNIPROTKB|J3KR63 [details] [associations]
symbol:ONECUT2 "One cut domain family member 2"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048935 "peripheral nervous system
neuron development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 EMBL:AC090340 HGNC:HGNC:8139
ProteinModelPortal:J3KR63 Ensembl:ENST00000491143 PhylomeDB:J3KR63
Uniprot:J3KR63
Length = 485
Score = 418 (152.2 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 80/86 (93%), Positives = 84/86 (97%)
Query: 346 LGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 405
+ SG+LEEINTKE+AQRI+AELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS
Sbjct: 305 VATSGQLEEINTKEVAQRITAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 364
Query: 406 GRETFRRMWKWLQEPEFQRMSALRLA 431
GRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 365 GRETFRRMWKWLQEPEFQRMSALRLA 390
Score = 134 (52.2 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 52/170 (30%), Positives = 79/170 (46%)
Query: 84 SPSGISVSVASIMDSSEFRNLHAEPTYQTLTNVNGRLXXXXXXXXXXXATLTPLQPLPPI 143
S S + S+ASI+D ++R + P + ++ ++ TLTPLQPLPPI
Sbjct: 83 SRSAMVTSMASILDGGDYRPELSIPLHHAMS-MSCDSSPPGMGMSNTYTTLTPLQPLPPI 141
Query: 144 STMSDKFAYGH----------------TGNVTGSFTVMQNNIGLGINSHYTYDKIQMSPP 187
ST+SDKF + H +GNV+GSFT+M++ GL ++ Y + P
Sbjct: 142 STVSDKFHHPHPHHHPHHHHHHHHQRLSGNVSGSFTLMRDERGLPAMNNL-YSPYKEMPG 200
Query: 188 QHYSPNNGLSTIVITQENSPL----SPQSTYSQNGLNSPQKSLSPNSYDS 233
S LS + T + L + Q + G K LSPN +D+
Sbjct: 201 MSQS----LSPLAATPLGNGLGGLHNAQQSLPNYGPPGHDKMLSPN-FDA 245
>UNIPROTKB|O95948 [details] [associations]
symbol:ONECUT2 "One cut domain family member 2"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0001952 "regulation of cell-matrix adhesion" evidence=IEA]
[GO:0002064 "epithelial cell development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0042384 "cilium assembly" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048935 "peripheral nervous system neuron development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=TAS] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 GO:GO:0030335
GO:GO:0042384 GO:GO:0031018 GO:GO:0045165 Gene3D:1.10.260.40
SUPFAM:SSF47413 GO:GO:0030512 GO:GO:0002064 GO:GO:0001952
GO:GO:0048935 eggNOG:NOG307335 HOGENOM:HOG000232114
HOVERGEN:HBG005981 OrthoDB:EOG480HWX EMBL:Y18198 EMBL:AC090340
IPI:IPI00001413 RefSeq:NP_004843.2 UniGene:Hs.194725
ProteinModelPortal:O95948 SMR:O95948 STRING:O95948
PhosphoSite:O95948 PaxDb:O95948 PRIDE:O95948
Ensembl:ENST00000262095 GeneID:9480 KEGG:hsa:9480 UCSC:uc002lgo.3
CTD:9480 GeneCards:GC18P055102 H-InvDB:HIX0039750 HGNC:HGNC:8139
MIM:604894 neXtProt:NX_O95948 PharmGKB:PA31925 InParanoid:O95948
OMA:SPYKEMP GenomeRNAi:9480 NextBio:35532 Bgee:O95948
CleanEx:HS_ONECUT2 Genevestigator:O95948 Uniprot:O95948
Length = 504
Score = 418 (152.2 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 80/86 (93%), Positives = 84/86 (97%)
Query: 346 LGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 405
+ SG+LEEINTKE+AQRI+AELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS
Sbjct: 324 VATSGQLEEINTKEVAQRITAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 383
Query: 406 GRETFRRMWKWLQEPEFQRMSALRLA 431
GRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 384 GRETFRRMWKWLQEPEFQRMSALRLA 409
Score = 134 (52.2 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 52/170 (30%), Positives = 79/170 (46%)
Query: 84 SPSGISVSVASIMDSSEFRNLHAEPTYQTLTNVNGRLXXXXXXXXXXXATLTPLQPLPPI 143
S S + S+ASI+D ++R + P + ++ ++ TLTPLQPLPPI
Sbjct: 102 SRSAMVTSMASILDGGDYRPELSIPLHHAMS-MSCDSSPPGMGMSNTYTTLTPLQPLPPI 160
Query: 144 STMSDKFAYGH----------------TGNVTGSFTVMQNNIGLGINSHYTYDKIQMSPP 187
ST+SDKF + H +GNV+GSFT+M++ GL ++ Y + P
Sbjct: 161 STVSDKFHHPHPHHHPHHHHHHHHQRLSGNVSGSFTLMRDERGLPAMNNL-YSPYKEMPG 219
Query: 188 QHYSPNNGLSTIVITQENSPL----SPQSTYSQNGLNSPQKSLSPNSYDS 233
S LS + T + L + Q + G K LSPN +D+
Sbjct: 220 MSQS----LSPLAATPLGNGLGGLHNAQQSLPNYGPPGHDKMLSPN-FDA 264
>UNIPROTKB|F1S1X5 [details] [associations]
symbol:ONECUT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048935 "peripheral nervous system neuron development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IEA] [GO:0042384 "cilium assembly"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0002064 "epithelial cell development" evidence=IEA] [GO:0001952
"regulation of cell-matrix adhesion" evidence=IEA] [GO:0001889
"liver development" evidence=IEA] InterPro:IPR003350
InterPro:IPR010982 Pfam:PF02376 PROSITE:PS51042 GO:GO:0003677
GO:GO:0045944 GO:GO:0001889 GO:GO:0003700 GO:GO:0030335
GO:GO:0042384 GO:GO:0031018 GO:GO:0045165 Gene3D:1.10.260.40
SUPFAM:SSF47413 GO:GO:0030512 GO:GO:0002064 GO:GO:0001952
GO:GO:0048935 GeneTree:ENSGT00530000063019 OMA:SPYKEMP
EMBL:CU062560 Ensembl:ENSSSCT00000005015 Uniprot:F1S1X5
Length = 352
Score = 424 (154.3 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 81/87 (93%), Positives = 85/87 (97%)
Query: 346 LGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 405
+ SG+LEEINTKE+AQRI+AELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS
Sbjct: 265 VATSGQLEEINTKEVAQRITAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 324
Query: 406 GRETFRRMWKWLQEPEFQRMSALRLAG 432
GRETFRRMWKWLQEPEFQRMSALRLAG
Sbjct: 325 GRETFRRMWKWLQEPEFQRMSALRLAG 351
Score = 127 (49.8 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 60/184 (32%), Positives = 89/184 (48%)
Query: 74 DSEILSPGKISPSGISVSVASIMDSSEFRNLHAEPTYQTLTNVNGRLXXXXXXXXXXXAT 133
D E+L+ SPS +ASI+D ++R + P + ++ ++ T
Sbjct: 39 DQELLA----SPS--PHHMASILDGGDYRPELSIPLHHAMS-MSCDSSPPGMGMSNTYTT 91
Query: 134 LTPLQPLPPISTMSDKFAYGH----------------TGNVTGSFTVMQNNIGLGINSHY 177
LTPLQPLPPIST+SDKF + H +GNV+GSFT+M++ GL ++
Sbjct: 92 LTPLQPLPPISTVSDKFHHPHPHHHPHHHHHHHHQRLSGNVSGSFTLMRDERGLPAMNNL 151
Query: 178 TYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQSTYSQ-NGLNSPQKSLSPNSYDSPYN 236
Y SP Y G+S Q SPL+ + GL++ Q+SL PN Y P +
Sbjct: 152 -Y-----SP---YKEMPGMS-----QSLSPLTATPLGNGLGGLHNAQQSL-PN-YGPPGH 195
Query: 237 QRDL 240
+ L
Sbjct: 196 DKML 199
>MGI|MGI:1891408 [details] [associations]
symbol:Onecut2 "one cut domain, family member 2"
species:10090 "Mus musculus" [GO:0001889 "liver development"
evidence=IGI] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IGI] [GO:0002064 "epithelial cell development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
[GO:0030335 "positive regulation of cell migration" evidence=IGI]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IGI] [GO:0031016 "pancreas
development" evidence=IGI] [GO:0031018 "endocrine pancreas
development" evidence=IGI] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IGI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048935 "peripheral
nervous system neuron development" evidence=IMP] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 MGI:MGI:1891408 GO:GO:0005634
GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030335 GO:GO:0042384 GO:GO:0031018 GO:GO:0045165
Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0030512 GO:GO:0002064
GO:GO:0001952 GO:GO:0048935 GeneTree:ENSGT00530000063019
eggNOG:NOG307335 HOGENOM:HOG000232114 HOVERGEN:HBG005981
OrthoDB:EOG480HWX CTD:9480 OMA:SPYKEMP EMBL:AY242995 EMBL:AC102106
IPI:IPI00875264 RefSeq:NP_919244.2 UniGene:Mm.234723
ProteinModelPortal:Q6XBJ3 SMR:Q6XBJ3 STRING:Q6XBJ3
PhosphoSite:Q6XBJ3 PRIDE:Q6XBJ3 Ensembl:ENSMUST00000115145
GeneID:225631 KEGG:mmu:225631 UCSC:uc008fef.1 InParanoid:Q6XBJ3
NextBio:377732 Bgee:Q6XBJ3 CleanEx:MM_ONECUT2 Genevestigator:Q6XBJ3
Uniprot:Q6XBJ3
Length = 505
Score = 418 (152.2 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 80/86 (93%), Positives = 84/86 (97%)
Query: 346 LGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 405
+ SG+LEEINTKE+AQRI+AELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS
Sbjct: 325 VATSGQLEEINTKEVAQRITAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 384
Query: 406 GRETFRRMWKWLQEPEFQRMSALRLA 431
GRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 385 GRETFRRMWKWLQEPEFQRMSALRLA 410
Score = 124 (48.7 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 47/164 (28%), Positives = 80/164 (48%)
Query: 84 SPSGISVSVASIMDSSEFRNLHAEPTYQTLTNVNGRLXXXXXXXXXXXATLTPLQPLPPI 143
S S + S+ASI+D S++R + P + ++ ++ TLTPLQPLPPI
Sbjct: 101 SRSAMVTSMASILDGSDYRPELSIPLHHAMS-MSCDSSPPGMGMSNTYTTLTPLQPLPPI 159
Query: 144 STMSDKFAYGHTGNVTGSFTVMQNN---IGLGINSHYTYDKIQMSPPQH---YSPNNGLS 197
ST+SDKF + H + ++ + ++ +T + + P YSP +
Sbjct: 160 STVSDKFHHPHPHHHPHHHHHHHHHHQRLSGNVSGSFTLMRDERGLPSMNNLYSPYKEMP 219
Query: 198 TIVITQENSPLSPQSTYSQ-NGLNSPQKSLSPNSYDSPYNQRDL 240
++ +Q SPL+ + GL++ Q+SL PN Y P + + L
Sbjct: 220 SM--SQSLSPLAATPLGNGLGGLHNAQQSL-PN-YGPPGHDKML 259
>RGD|1564677 [details] [associations]
symbol:Onecut2 "one cut homeobox 2" species:10116 "Rattus
norvegicus" [GO:0001889 "liver development" evidence=ISO]
[GO:0001952 "regulation of cell-matrix adhesion" evidence=ISO]
[GO:0002064 "epithelial cell development" evidence=ISO] [GO:0003677
"DNA binding" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0009653 "anatomical
structure morphogenesis" evidence=ISO] [GO:0030335 "positive
regulation of cell migration" evidence=ISO] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=ISO] [GO:0031016 "pancreas development"
evidence=ISO] [GO:0031018 "endocrine pancreas development"
evidence=ISO] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0048935 "peripheral nervous system
neuron development" evidence=ISO] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 RGD:1564677 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 IPI:IPI00367519
Ensembl:ENSRNOT00000024631 Uniprot:F1LUD6
Length = 431
Score = 418 (152.2 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 80/86 (93%), Positives = 84/86 (97%)
Query: 346 LGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 405
+ SG+LEEINTKE+AQRI+AELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS
Sbjct: 251 VATSGQLEEINTKEVAQRITAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 310
Query: 406 GRETFRRMWKWLQEPEFQRMSALRLA 431
GRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 311 GRETFRRMWKWLQEPEFQRMSALRLA 336
Score = 124 (48.7 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 47/164 (28%), Positives = 80/164 (48%)
Query: 84 SPSGISVSVASIMDSSEFRNLHAEPTYQTLTNVNGRLXXXXXXXXXXXATLTPLQPLPPI 143
S S + S+ASI+D S++R + P + ++ ++ TLTPLQPLPPI
Sbjct: 27 SRSAMVTSMASILDGSDYRPELSIPLHHAMS-MSCDSSPPGMGMSNTYTTLTPLQPLPPI 85
Query: 144 STMSDKFAYGHTGNVTGSFTVMQNN---IGLGINSHYTYDKIQMSPPQH---YSPNNGLS 197
ST+SDKF + H + ++ + ++ +T + + P YSP +
Sbjct: 86 STVSDKFHHPHPHHHPHHHHHHHHHHQRLSGNVSGSFTLMRDERGLPSMNNLYSPYKEMP 145
Query: 198 TIVITQENSPLSPQSTYSQ-NGLNSPQKSLSPNSYDSPYNQRDL 240
++ +Q SPL+ + GL++ Q+SL PN Y P + + L
Sbjct: 146 SM--SQSLSPLAATPLGNGLGGLHNAQQSL-PN-YGPPGHDKML 185
>MGI|MGI:1891409 [details] [associations]
symbol:Onecut3 "one cut domain, family member 3"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Reactome:REACT_13641 InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
MGI:MGI:1891409 GO:GO:0005829 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 Reactome:REACT_127416 GO:GO:0031018
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
eggNOG:NOG307335 HOGENOM:HOG000232114 HOVERGEN:HBG005981
HSSP:O08755 CTD:390874 OMA:HPAMGMA OrthoDB:EOG4ZS93X EMBL:AY080897
EMBL:BC058700 IPI:IPI00170291 RefSeq:NP_631972.2 UniGene:Mm.250572
ProteinModelPortal:Q8K557 SMR:Q8K557 STRING:Q8K557 PRIDE:Q8K557
Ensembl:ENSMUST00000051773 GeneID:246086 KEGG:mmu:246086
UCSC:uc007gdn.1 InParanoid:Q8K557 ChiTaRS:ONECUT3 NextBio:387067
Bgee:Q8K557 CleanEx:MM_ONECUT3 Genevestigator:Q8K557 Uniprot:Q8K557
Length = 490
Score = 403 (146.9 bits), Expect = 3.3e-47, Sum P(3) = 3.3e-47
Identities = 78/90 (86%), Positives = 82/90 (91%)
Query: 342 GAVSLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWS 401
G+ G EEINTKE+AQRI+AELKRYSIPQAIFAQR+LCRSQGTLSDLLRNPKPWS
Sbjct: 305 GSGGPGAGAAAEEINTKEVAQRITAELKRYSIPQAIFAQRILCRSQGTLSDLLRNPKPWS 364
Query: 402 KLKSGRETFRRMWKWLQEPEFQRMSALRLA 431
KLKSGRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 365 KLKSGRETFRRMWKWLQEPEFQRMSALRLA 394
Score = 69 (29.3 bits), Expect = 3.3e-47, Sum P(3) = 3.3e-47
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 133 TLTPLQPLPPISTMSDKFAYGHTGNVTGS 161
TLTPLQ LPP++ ++DKF H V G+
Sbjct: 106 TLTPLQHLPPLAAVADKF---HQHAVAGA 131
Score = 50 (22.7 bits), Expect = 3.3e-47, Sum P(3) = 3.3e-47
Identities = 25/103 (24%), Positives = 44/103 (42%)
Query: 157 NVTGSFTVMQNNIGLGINSHYTYDKIQMSPPQHYSPNNGLSTIVITQENS-----PLSPQ 211
+V+GSFT+M++ + + Y P SP + L + + +S P P
Sbjct: 157 SVSGSFTLMRDERAALASVGHLYGPYGKELPTMGSPLSPLPSALPPALHSAPQPPPPPPL 216
Query: 212 STYSQNGLNSPQKSLSPNSYDSPY-----NQRDLVDRSVLGGG 249
+ Y G + K L P +++ P+ D + R + GGG
Sbjct: 217 AAYGAPGHLAGDKLLPPAAFE-PHAALLGRAEDALARGLPGGG 258
>UNIPROTKB|O60422 [details] [associations]
symbol:ONECUT3 "One cut domain family member 3"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=TAS] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
Reactome:REACT_111045 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0031018 Gene3D:1.10.260.40 SUPFAM:SSF47413 EMBL:AC004755
eggNOG:NOG307335 HOGENOM:HOG000232114 HOVERGEN:HBG005981
EMBL:AC005256 IPI:IPI00556491 RefSeq:NP_001073957.1
UniGene:Hs.654347 HSSP:O08755 ProteinModelPortal:O60422 SMR:O60422
STRING:O60422 PhosphoSite:O60422 PRIDE:O60422
Ensembl:ENST00000382349 GeneID:390874 KEGG:hsa:390874
UCSC:uc010xgr.2 CTD:390874 GeneCards:GC19P001727 HGNC:HGNC:13399
MIM:611294 neXtProt:NX_O60422 PharmGKB:PA31926 InParanoid:O60422
OMA:HPAMGMA OrthoDB:EOG4ZS93X GenomeRNAi:390874 NextBio:104112
Bgee:O60422 CleanEx:HS_ONECUT3 Genevestigator:O60422 Uniprot:O60422
Length = 494
Score = 401 (146.2 bits), Expect = 2.3e-46, Sum P(3) = 2.3e-46
Identities = 79/90 (87%), Positives = 83/90 (92%)
Query: 342 GAVSLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWS 401
G S G + E EINTKE+AQRI+AELKRYSIPQAIFAQR+LCRSQGTLSDLLRNPKPWS
Sbjct: 310 GGPSAGAAAE--EINTKEVAQRITAELKRYSIPQAIFAQRILCRSQGTLSDLLRNPKPWS 367
Query: 402 KLKSGRETFRRMWKWLQEPEFQRMSALRLA 431
KLKSGRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 368 KLKSGRETFRRMWKWLQEPEFQRMSALRLA 397
Score = 68 (29.0 bits), Expect = 2.3e-46, Sum P(3) = 2.3e-46
Identities = 12/18 (66%), Positives = 16/18 (88%)
Query: 133 TLTPLQPLPPISTMSDKF 150
TLTPLQ LPP++ ++DKF
Sbjct: 107 TLTPLQHLPPLAAVADKF 124
Score = 45 (20.9 bits), Expect = 2.3e-46, Sum P(3) = 2.3e-46
Identities = 31/118 (26%), Positives = 46/118 (38%)
Query: 157 NVTGSFTVMQNN-IGLGINSH-Y-TYDKI--QMSPPQHYSPNN---GLSTIVITQENSPL 208
+V+GSFT+M++ L H Y Y K M P PN L P
Sbjct: 163 SVSGSFTLMRDERAALASVGHLYGPYGKELPAMGSPLSPLPNALPPALHGAPQPPPPPPP 222
Query: 209 SPQSTYSQNGLNSPQKSLSPNSYDSPY-----NQRDLVDRSVLGGGSQSPTLSPNEGS 261
P + Y G + K L P +++ P+ D + R + GGG + + GS
Sbjct: 223 PPLAAYGPPGHLAGDKLLPPAAFE-PHAALLGRAEDALARGLPGGGGGTGSGGAGSGS 279
>UNIPROTKB|E2QWY9 [details] [associations]
symbol:ONECUT3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF02376 PROSITE:PS51042 GO:GO:0003677 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 GO:GO:0005667 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 OMA:HPAMGMA
EMBL:AAEX03012630 EMBL:AAEX03012631 EMBL:AAEX03012632
Ensembl:ENSCAFT00000030959 Uniprot:E2QWY9
Length = 440
Score = 402 (146.6 bits), Expect = 3.7e-46, Sum P(3) = 3.7e-46
Identities = 77/85 (90%), Positives = 80/85 (94%)
Query: 347 GNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSG 406
G EEINTKE+AQRI+AELKRYSIPQAIFAQR+LCRSQGTLSDLLRNPKPWSKLKSG
Sbjct: 310 GAGAAAEEINTKEVAQRITAELKRYSIPQAIFAQRILCRSQGTLSDLLRNPKPWSKLKSG 369
Query: 407 RETFRRMWKWLQEPEFQRMSALRLA 431
RETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 370 RETFRRMWKWLQEPEFQRMSALRLA 394
Score = 68 (29.0 bits), Expect = 3.7e-46, Sum P(3) = 3.7e-46
Identities = 12/18 (66%), Positives = 16/18 (88%)
Query: 133 TLTPLQPLPPISTMSDKF 150
TLTPLQ LPP++ ++DKF
Sbjct: 105 TLTPLQHLPPLAAVADKF 122
Score = 42 (19.8 bits), Expect = 3.7e-46, Sum P(3) = 3.7e-46
Identities = 29/106 (27%), Positives = 42/106 (39%)
Query: 157 NVTGSFTVMQNN-IGLGINSH-Y-TYDKI--QMSPPQHYSPNN---GLSTIVITQENSPL 208
+V+GSFT+M++ L H Y Y K M P PN L P
Sbjct: 161 SVSGSFTLMRDERAALASVGHLYGPYGKELPAMGSPLSPLPNALPPALHGAPQPPPPPPP 220
Query: 209 SPQSTYSQNGLNSPQKSLSPNSYDSPY-----NQRDLVDRSVLGGG 249
P + Y G + K L P +++ P+ D + R + GGG
Sbjct: 221 PPLAAYGAPGHLAGDKLLPPAAFE-PHAALLGRAEDALARGLPGGG 265
>UNIPROTKB|F1MXR2 [details] [associations]
symbol:ONECUT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0030335 GO:GO:0042384 GO:GO:0031018
GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0030512
GO:GO:0002064 GO:GO:0001952 GO:GO:0048935
GeneTree:ENSGT00530000063019 OMA:SPYKEMP EMBL:DAAA02057150
EMBL:DAAA02057151 IPI:IPI01003833 Ensembl:ENSBTAT00000030977
Uniprot:F1MXR2
Length = 364
Score = 418 (152.2 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 80/86 (93%), Positives = 84/86 (97%)
Query: 346 LGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 405
+ SG+LEEINTKE+AQRI+AELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS
Sbjct: 184 VATSGQLEEINTKEVAQRITAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 243
Query: 406 GRETFRRMWKWLQEPEFQRMSALRLA 431
GRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 244 GRETFRRMWKWLQEPEFQRMSALRLA 269
Score = 74 (31.1 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 155 TGNVTGSFTVMQNNIGLG-INSHYTYDKIQMSPPQHYSP------NNGLSTIVITQENSP 207
+GNV+GSFT++++ GL +N+ Y+ K Q SP NGL + Q++ P
Sbjct: 48 SGNVSGSFTLLRDERGLPTMNNLYSPYKEMPGMGQSLSPLAATPLGNGLGGLHNAQQSLP 107
Query: 208 LSPQSTYSQNGLNSPQKSLSPNSYDS 233
Y G P K LSPN +D+
Sbjct: 108 -----NYGPPG---PDKMLSPN-FDA 124
Score = 72 (30.4 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 32/105 (30%), Positives = 49/105 (46%)
Query: 137 LQPLPPISTMSDKFAYGHTGNVTGSFTVM---QNNIGLGINSHYTYDKIQMSPPQH---Y 190
L+PLPPIST+SDKF + H + Q + ++ +T + + P Y
Sbjct: 12 LKPLPPISTVSDKFHHPHPHHHPHHHHHHHHHQQRLSGNVSGSFTLLRDERGLPTMNNLY 71
Query: 191 SPNNGLSTIVITQENSPLSPQSTYSQ-NGLNSPQKSLSPNSYDSP 234
SP + + Q SPL+ + GL++ Q+SL PN Y P
Sbjct: 72 SPYKEMPGM--GQSLSPLAATPLGNGLGGLHNAQQSL-PN-YGPP 112
>UNIPROTKB|F1SDH9 [details] [associations]
symbol:ONECUT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
EMBL:FP102751 Ensembl:ENSSSCT00000014683 Uniprot:F1SDH9
Length = 446
Score = 402 (146.6 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 77/85 (90%), Positives = 80/85 (94%)
Query: 347 GNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSG 406
G EEINTKE+AQRI+AELKRYSIPQAIFAQR+LCRSQGTLSDLLRNPKPWSKLKSG
Sbjct: 265 GAGAAAEEINTKEVAQRITAELKRYSIPQAIFAQRILCRSQGTLSDLLRNPKPWSKLKSG 324
Query: 407 RETFRRMWKWLQEPEFQRMSALRLA 431
RETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 325 RETFRRMWKWLQEPEFQRMSALRLA 349
Score = 72 (30.4 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 133 TLTPLQPLPPISTMSDKFAYGHTGNVTGSFT 163
TLTPLQ LPP++ ++DKF H G + T
Sbjct: 106 TLTPLQHLPPLAAVADKF---HXGTCSSFLT 133
>UNIPROTKB|I3L6D9 [details] [associations]
symbol:ONECUT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 OMA:HPAMGMA
EMBL:FP102751 Ensembl:ENSSSCT00000029615 Uniprot:I3L6D9
Length = 482
Score = 402 (146.6 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 77/85 (90%), Positives = 80/85 (94%)
Query: 347 GNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSG 406
G EEINTKE+AQRI+AELKRYSIPQAIFAQR+LCRSQGTLSDLLRNPKPWSKLKSG
Sbjct: 266 GAGAAAEEINTKEVAQRITAELKRYSIPQAIFAQRILCRSQGTLSDLLRNPKPWSKLKSG 325
Query: 407 RETFRRMWKWLQEPEFQRMSALRLA 431
RETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 326 RETFRRMWKWLQEPEFQRMSALRLA 350
Score = 68 (29.0 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 12/18 (66%), Positives = 16/18 (88%)
Query: 133 TLTPLQPLPPISTMSDKF 150
TLTPLQ LPP++ ++DKF
Sbjct: 108 TLTPLQHLPPLAAVADKF 125
>UNIPROTKB|Q9UBC0 [details] [associations]
symbol:ONECUT1 "Hepatocyte nuclear factor 6" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0001952 "regulation of cell-matrix adhesion" evidence=IEA]
[GO:0002064 "epithelial cell development" evidence=IEA] [GO:0006006
"glucose metabolic process" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0042384 "cilium assembly" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0031018 "endocrine pancreas development"
evidence=TAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=ISS] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 Reactome:REACT_111045
GO:GO:0043565 GO:GO:0001889 GO:GO:0006006 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030183 GO:GO:0048536
GO:GO:0030335 GO:GO:0042384 GO:GO:0031018 EMBL:CH471082
GO:GO:0007492 GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413
GO:GO:0030512 Pathway_Interaction_DB:foxm1pathway GO:GO:0002064
GO:GO:0001952 eggNOG:NOG307335 EMBL:AF035581 EMBL:AF035580
EMBL:U96173 EMBL:BC140830 EMBL:Y17739 EMBL:U77975 IPI:IPI00002508
RefSeq:NP_004489.1 UniGene:Hs.658573 ProteinModelPortal:Q9UBC0
SMR:Q9UBC0 STRING:Q9UBC0 PhosphoSite:Q9UBC0 DMDM:13627184
PRIDE:Q9UBC0 Ensembl:ENST00000305901 GeneID:3175 KEGG:hsa:3175
UCSC:uc002aci.1 CTD:3175 GeneCards:GC15M053049 HGNC:HGNC:8138
HPA:HPA003457 MIM:604164 neXtProt:NX_Q9UBC0 PharmGKB:PA31924
HOGENOM:HOG000232114 HOVERGEN:HBG005981 InParanoid:Q9UBC0 KO:K08026
OMA:QMEEVNT OrthoDB:EOG480HWX PhylomeDB:Q9UBC0 ChiTaRS:ONECUT1
GenomeRNAi:3175 NextBio:12598 ArrayExpress:Q9UBC0 Bgee:Q9UBC0
CleanEx:HS_ONECUT1 Genevestigator:Q9UBC0 GermOnline:ENSG00000169856
Uniprot:Q9UBC0
Length = 465
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 112/215 (52%), Positives = 132/215 (61%)
Query: 227 SPNSYDSPYNQRDLVDRSVLG-GGSQSPTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGI 285
S N+ +PY+ + V G G S SP S GS+H+S L A +PT +
Sbjct: 160 SMNNLYTPYH------KDVAGMGQSLSPLSSSGLGSIHNSQQGLPHYAHPGAAMPTDKML 213
Query: 286 TT--ITPHTVVVSPQTSPQH--SLISNQLQRSDSPG--PPKIISQQXXXXXXXXXXXXN- 338
T H + + QH + + + P P ++ Q N
Sbjct: 214 TPNGFEAHHPAMLGRHGEQHLTPTSAGMVPINGLPPHHPHAHLNAQGHGQLLGTAREPNP 273
Query: 339 AVVGA-VSLG-NSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 396
+V GA VS G NSG++EEINTKE+AQRI+ ELKRYSIPQAIFAQRVLCRSQGTLSDLLRN
Sbjct: 274 SVTGAQVSNGSNSGQMEEINTKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 333
Query: 397 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 431
PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 334 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 368
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 55/177 (31%), Positives = 80/177 (45%)
Query: 133 TLTPLQPLPPISTMSDKFAYGH---------------TGNVTGSFTVMQNNIGLG-INSH 176
TLTPLQPLPPIST+SDKF + H GNV+GSFT+M++ GL +N+
Sbjct: 105 TLTPLQPLPPISTVSDKFPHHHHHHHHHHHPHHHQRLAGNVSGSFTLMRDERGLASMNNL 164
Query: 177 YTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQSTYSQNGLNSPQKSLSPNSYDSPYN 236
YT P H + LSP S+ +++ Q+ L P+ Y P
Sbjct: 165 YT--------PYHKD---------VAGMGQSLSPLSSSGLGSIHNSQQGL-PH-YAHPGA 205
Query: 237 QRDLVDRSVLGGGSQS--PTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGITTITPH 291
D+ + G ++ P + G H +PT+ A +P +NG+ PH
Sbjct: 206 AMP-TDKMLTPNGFEAHHPAMLGRHGEQHLTPTS-------AGMVP-INGLPPHHPH 253
>MGI|MGI:1196423 [details] [associations]
symbol:Onecut1 "one cut domain, family member 1"
species:10090 "Mus musculus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISO] [GO:0001889 "liver development"
evidence=IGI] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IGI] [GO:0002064 "epithelial cell development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006006 "glucose metabolic process" evidence=ISO;IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0009653 "anatomical structure
morphogenesis" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030183 "B cell differentiation" evidence=IMP]
[GO:0030335 "positive regulation of cell migration" evidence=IGI]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IGI] [GO:0031016 "pancreas
development" evidence=IGI;IMP] [GO:0031018 "endocrine pancreas
development" evidence=IGI] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IGI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0048536 "spleen
development" evidence=IMP] Reactome:REACT_13641 InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 MGI:MGI:1196423 GO:GO:0005654
GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 GO:GO:0006006 Gene3D:1.10.10.60
SUPFAM:SSF46689 Reactome:REACT_127416 GO:GO:0030183 GO:GO:0048536
GO:GO:0030335 GO:GO:0042384 GO:GO:0031018 GO:GO:0007492
GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0030512
GO:GO:0002064 GO:GO:0001952 GeneTree:ENSGT00530000063019
eggNOG:NOG307335 CTD:3175 HOGENOM:HOG000232114 HOVERGEN:HBG005981
KO:K08026 OMA:QMEEVNT OrthoDB:EOG480HWX EMBL:U95945 EMBL:BC024053
IPI:IPI00115589 RefSeq:NP_032288.1 UniGene:Mm.303355 PDB:1S7E
PDBsum:1S7E ProteinModelPortal:O08755 SMR:O08755 STRING:O08755
PhosphoSite:O08755 PRIDE:O08755 Ensembl:ENSMUST00000056006
GeneID:15379 KEGG:mmu:15379 UCSC:uc009qrh.1 InParanoid:O08755
EvolutionaryTrace:O08755 NextBio:288042 Bgee:O08755
CleanEx:MM_ONECUT1 Genevestigator:O08755
GermOnline:ENSMUSG00000043013 Uniprot:O08755
Length = 465
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 111/215 (51%), Positives = 131/215 (60%)
Query: 227 SPNSYDSPYNQRDLVDRSVLG-GGSQSPTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGI 285
S N+ +PY+ + V G G S SP GS+H+S L A +PT +
Sbjct: 160 SMNNLYTPYH------KDVAGMGQSLSPLSGSGLGSIHNSQQGLPHYAHPGAAMPTDKML 213
Query: 286 TT--ITPHTVVVSPQTSPQH--SLISNQLQRSDSPG--PPKIISQQXXXXXXXXXXXXN- 338
T H + + QH + + + P P ++ Q N
Sbjct: 214 TPNGFEAHHPAMLGRHGEQHLTPTSAGMVPINGLPPHHPHAHLNAQGHGQLLGTAREPNP 273
Query: 339 AVVGA-VSLG-NSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 396
+V GA VS G NSG++EEINTKE+AQRI+ ELKRYSIPQAIFAQRVLCRSQGTLSDLLRN
Sbjct: 274 SVTGAQVSNGSNSGQMEEINTKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 333
Query: 397 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 431
PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 334 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 368
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 65/230 (28%), Positives = 100/230 (43%)
Query: 89 SVSVASIMDS----SEFRNLHAEPTYQTLTNVNGRLXXX-----XXXXXXXXATLTPLQP 139
S+ +AS++D S++ + H P + ++ + TLTPLQP
Sbjct: 52 SMGMASLLDGGSGGSDYHHHHRAPEHSLAGPLHPTMTMACETPPGMSMPTTYTTLTPLQP 111
Query: 140 LPPISTMSDKFAYGH---------------TGNVTGSFTVMQNNIGLG-INSHYTYDKIQ 183
LPPIST+SDKF + H GNV+GSFT+M++ GL +N+ YT
Sbjct: 112 LPPISTVSDKFPHHHHHHHHHHHPHHHQRLAGNVSGSFTLMRDERGLASMNNLYT----- 166
Query: 184 MSPPQHYSPNNGLSTIVITQENSPLSPQSTYSQNGLNSPQKSLSPNSYDSPYNQRDLVDR 243
P H G+ Q SPLS S +++ Q+ L P+ Y P D+
Sbjct: 167 ---PYHKDVA-GMG-----QSLSPLSGSGLGS---IHNSQQGL-PH-YAHPGAAMP-TDK 211
Query: 244 SVLGGGSQS--PTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGITTITPH 291
+ G ++ P + G H +PT+ A +P +NG+ PH
Sbjct: 212 MLTPNGFEAHHPAMLGRHGEQHLTPTS-------AGMVP-INGLPPHHPH 253
>UNIPROTKB|G3N248 [details] [associations]
symbol:ONECUT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030183 "B cell differentiation" evidence=IEA]
[GO:0007492 "endoderm development" evidence=IEA] [GO:0006006
"glucose metabolic process" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0001889 GO:GO:0003700 GO:GO:0006006
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030183 GO:GO:0048536
GO:GO:0030335 GO:GO:0042384 GO:GO:0031018 GO:GO:0007492
GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0030512
GO:GO:0002064 GO:GO:0001952 GeneTree:ENSGT00530000063019 CTD:3175
KO:K08026 OMA:QMEEVNT EMBL:DAAA02028984 RefSeq:NP_001178090.1
UniGene:Bt.106196 UniGene:Bt.37181 Ensembl:ENSBTAT00000066281
GeneID:503584 KEGG:bta:503584 NextBio:20866219 Uniprot:G3N248
Length = 465
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 110/215 (51%), Positives = 130/215 (60%)
Query: 227 SPNSYDSPYNQRDLVDRSVLG-GGSQSPTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGI 285
S N+ +PY+ + V G G S SP G +H+S L A +PT +
Sbjct: 160 SMNNLYTPYH------KDVAGMGQSLSPLSGSGLGGIHNSQQGLPHYAHPGAAMPTDKML 213
Query: 286 TT--ITPHTVVVSPQTSPQH--SLISNQLQRSDSPG--PPKIISQQXXXXXXXXXXXXN- 338
T H + + QH + + + P P ++ Q N
Sbjct: 214 TPNGFEAHHPAMLGRHGEQHLTPTSAGMVPINGLPPHHPHAHLNAQGHGQLLGTAREPNP 273
Query: 339 AVVGA-VSLG-NSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 396
+V GA VS G NSG++EEINTKE+AQRI+ ELKRYSIPQAIFAQRVLCRSQGTLSDLLRN
Sbjct: 274 SVTGAQVSNGSNSGQMEEINTKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 333
Query: 397 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 431
PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 334 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 368
Score = 134 (52.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 63/230 (27%), Positives = 98/230 (42%)
Query: 89 SVSVASIMD----SSEFRNLHAEPTYQTLTNVNGRLXXX-----XXXXXXXXATLTPLQP 139
S+ +AS++D S ++ + H P + ++ + TLTPLQP
Sbjct: 52 SMGMASLLDGGGGSGDYHHHHRAPEHSLAGPLHPTMTMACETPPGMSMPTTYTTLTPLQP 111
Query: 140 LPPISTMSDKFAYGH---------------TGNVTGSFTVMQNNIGLG-INSHYTYDKIQ 183
LPPIST+SDKF + H GNV+GSFT+M++ GL +N+ YT
Sbjct: 112 LPPISTVSDKFPHHHHHHHHHHHPHHHQRLAGNVSGSFTLMRDERGLASMNNLYT----- 166
Query: 184 MSPPQHYSPNNGLSTIVITQENSPLSPQSTYSQNGLNSPQKSLSPNSYDSPYNQRDLVDR 243
P H + LSP S G+++ Q+ L P+ Y P D+
Sbjct: 167 ---PYHKD---------VAGMGQSLSPLSGSGLGGIHNSQQGL-PH-YAHPGAAMP-TDK 211
Query: 244 SVLGGGSQS--PTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGITTITPH 291
+ G ++ P + G H +PT+ A +P +NG+ PH
Sbjct: 212 MLTPNGFEAHHPAMLGRHGEQHLTPTS-------AGMVP-INGLPPHHPH 253
>UNIPROTKB|F1RZD6 [details] [associations]
symbol:ONECUT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030183 "B cell differentiation" evidence=IEA]
[GO:0007492 "endoderm development" evidence=IEA] [GO:0006006
"glucose metabolic process" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0001889 GO:GO:0003700 GO:GO:0006006
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030183 GO:GO:0048536
GO:GO:0030335 GO:GO:0042384 GO:GO:0031018 GO:GO:0007492
GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0030512
GO:GO:0002064 GO:GO:0001952 GeneTree:ENSGT00530000063019 CTD:3175
KO:K08026 OMA:QMEEVNT EMBL:CU075354 RefSeq:XP_001929026.1
UniGene:Ssc.38609 Ensembl:ENSSSCT00000005097 GeneID:100152052
KEGG:ssc:100152052 Uniprot:F1RZD6
Length = 465
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 110/215 (51%), Positives = 130/215 (60%)
Query: 227 SPNSYDSPYNQRDLVDRSVLG-GGSQSPTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGI 285
S N+ +PY+ + V G G S SP G +H+S L A +PT +
Sbjct: 160 SMNNLYTPYH------KDVAGMGQSLSPLSGSGLGGIHNSQQGLPHYAHPGAAMPTDKML 213
Query: 286 TT--ITPHTVVVSPQTSPQH--SLISNQLQRSDSPG--PPKIISQQXXXXXXXXXXXXN- 338
T H + + QH + + + P P ++ Q N
Sbjct: 214 TPNGFEAHHPAMLGRHGEQHLTPTSAGMVPINGLPPHHPHAHLNAQGHGQLLGTAREPNP 273
Query: 339 AVVGA-VSLG-NSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 396
+V GA VS G NSG++EEINTKE+AQRI+ ELKRYSIPQAIFAQRVLCRSQGTLSDLLRN
Sbjct: 274 SVTGAQVSNGSNSGQMEEINTKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 333
Query: 397 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 431
PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 334 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 368
Score = 134 (52.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 63/230 (27%), Positives = 98/230 (42%)
Query: 89 SVSVASIMD----SSEFRNLHAEPTYQTLTNVNGRLXXX-----XXXXXXXXATLTPLQP 139
S+ +AS++D S ++ + H P + ++ + TLTPLQP
Sbjct: 52 SMGMASLLDGGGGSGDYHHHHRAPEHSLAGPLHPTMTMACETPPGMSMPTTYTTLTPLQP 111
Query: 140 LPPISTMSDKFAYGH---------------TGNVTGSFTVMQNNIGLG-INSHYTYDKIQ 183
LPPIST+SDKF + H GNV+GSFT+M++ GL +N+ YT
Sbjct: 112 LPPISTVSDKFPHHHHHHHHHHHPHHHQRLAGNVSGSFTLMRDERGLASMNNLYT----- 166
Query: 184 MSPPQHYSPNNGLSTIVITQENSPLSPQSTYSQNGLNSPQKSLSPNSYDSPYNQRDLVDR 243
P H + LSP S G+++ Q+ L P+ Y P D+
Sbjct: 167 ---PYHKD---------VAGMGQSLSPLSGSGLGGIHNSQQGL-PH-YAHPGAAMP-TDK 211
Query: 244 SVLGGGSQS--PTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGITTITPH 291
+ G ++ P + G H +PT+ A +P +NG+ PH
Sbjct: 212 MLTPNGFEAHHPAMLGRHGEQHLTPTS-------AGMVP-INGLPPHHPH 253
>UNIPROTKB|E2R096 [details] [associations]
symbol:ONECUT1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0006006 "glucose metabolic process" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0001889 GO:GO:0003700 GO:GO:0006006
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030183 GO:GO:0048536
GO:GO:0030335 GO:GO:0042384 GO:GO:0031018 GO:GO:0007492
GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0030512
GO:GO:0002064 GO:GO:0001952 GeneTree:ENSGT00530000063019 CTD:3175
KO:K08026 OMA:QMEEVNT EMBL:AAEX03016146 RefSeq:XP_851227.2
Ensembl:ENSCAFT00000025139 GeneID:487558 KEGG:cfa:487558
NextBio:20861136 Uniprot:E2R096
Length = 465
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 110/215 (51%), Positives = 130/215 (60%)
Query: 227 SPNSYDSPYNQRDLVDRSVLG-GGSQSPTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGI 285
S N+ +PY+ + V G G S SP S +H+S L A +PT +
Sbjct: 160 SMNNLYTPYH------KDVAGMGQSLSPLSSSGLSGIHNSQQGLPHYAHPGAAMPTDKML 213
Query: 286 TT--ITPHTVVVSPQTSPQH--SLISNQLQRSDSPG--PPKIISQQXXXXXXXXXXXXN- 338
T H + + QH + + + P P ++ Q N
Sbjct: 214 TPNGFEAHHPAMLGRHGEQHLTPTSAGMVPINGLPPHHPHAHLNAQGHGQLLGTAREPNP 273
Query: 339 AVVGA-VSLG-NSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 396
+V GA VS G NSG++EEINTKE+AQRI+ ELKRYSIPQAIFAQRVLCRSQGTLSDLLRN
Sbjct: 274 SVTGAQVSNGSNSGQMEEINTKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLRN 333
Query: 397 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 431
PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 334 PKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 368
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 56/177 (31%), Positives = 82/177 (46%)
Query: 133 TLTPLQPLPPISTMSDKFAYGH---------------TGNVTGSFTVMQNNIGLG-INSH 176
TLTPLQPLPPIST+SDKF + H GNV+GSFT+M++ GL +N+
Sbjct: 105 TLTPLQPLPPISTVSDKFPHHHHHHHHHHHPHHHQRLAGNVSGSFTLMRDERGLASMNNL 164
Query: 177 YTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQSTYSQNGLNSPQKSLSPNSYDSPYN 236
YT P H + LSP S+ +G+++ Q+ L P+ Y P
Sbjct: 165 YT--------PYHKD---------VAGMGQSLSPLSSSGLSGIHNSQQGL-PH-YAHPGA 205
Query: 237 QRDLVDRSVLGGGSQS--PTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGITTITPH 291
D+ + G ++ P + G H +PT+ A +P +NG+ PH
Sbjct: 206 AMP-TDKMLTPNGFEAHHPAMLGRHGEQHLTPTS-------AGMVP-INGLPPHHPH 253
>WB|WBGene00015934 [details] [associations]
symbol:ceh-48 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 eggNOG:NOG307335
EMBL:FO080597 PIR:A88712 RefSeq:NP_501046.1
ProteinModelPortal:O45080 SMR:O45080 DIP:DIP-25436N IntAct:O45080
MINT:MINT-1073800 PaxDb:O45080 EnsemblMetazoa:C17H12.9.1
EnsemblMetazoa:C17H12.9.2 GeneID:182756 KEGG:cel:CELE_C17H12.9
UCSC:C17H12.9 CTD:182756 WormBase:C17H12.9 HOGENOM:HOG000018091
InParanoid:O45080 OMA:QEADSTT NextBio:918718 Uniprot:O45080
Length = 459
Score = 378 (138.1 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 106/231 (45%), Positives = 137/231 (59%)
Query: 207 PLSPQSTYSQNGLNSPQKSLSPNSY-----DSPYNQRDLVDRSVLGGGSQSPTLSPNEGS 261
PL P ST + + S SPN Y +S Y+ + + G + S + SP++ S
Sbjct: 93 PLPPISTVTSKSTKVQRPSPSPNFYFPTSSNSSYDMKYEEEEDDCEGITHSSS-SPSDFS 151
Query: 262 LHSSPTTLVTNFQGAATIPTMNGITTITPHTVVVSPQTSPQHSLISNQLQRSDSPGP-PK 320
H T L F A++ + + +TT++ T S + I+ ++Q +DS PK
Sbjct: 152 NHG--TDLNHPFS-ASSFDSFD-VTTVS--TTATSTIMNSTDKFIA-RIQEADSTTKSPK 204
Query: 321 IISQQXXXXXXXXXXXXNAVVGAVSLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQ 380
S A++ + + EE+NTKELA +I+AELKRYSIPQAIFA+
Sbjct: 205 GTSPA-------------ALMHGHCEEDFDDGEELNTKELALQIAAELKRYSIPQAIFAE 251
Query: 381 RVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA 431
RVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRM KWL+EPEFQRMSALRLA
Sbjct: 252 RVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMAKWLEEPEFQRMSALRLA 302
Score = 70 (29.7 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 132 ATLTPLQPLPPISTMSDK 149
ATLT LQPLPPIST++ K
Sbjct: 86 ATLTNLQPLPPISTVTSK 103
>ZFIN|ZDB-GENE-020531-1 [details] [associations]
symbol:onecutl "one cut domain, family member, like"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
ZFIN:ZDB-GENE-020531-1 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 eggNOG:NOG307335
HOGENOM:HOG000232114 HOVERGEN:HBG005981 EMBL:BX248517
IPI:IPI00632148 UniGene:Dr.159955 SMR:A2BF65
Ensembl:ENSDART00000121764 Ensembl:ENSDART00000150028
InParanoid:A2BF65 OMA:RENHRPT OrthoDB:EOG4KH2VH Uniprot:A2BF65
Length = 450
Score = 356 (130.4 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 69/84 (82%), Positives = 77/84 (91%)
Query: 347 GNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSG 406
G+ GE EINTK++AQRI ELKRYSIPQAIFA+RVLCRSQGTLSDLLRNPKPW KLKSG
Sbjct: 265 GSGGE--EINTKDVAQRIITELKRYSIPQAIFAERVLCRSQGTLSDLLRNPKPWGKLKSG 322
Query: 407 RETFRRMWKWLQEPEFQRMSALRL 430
RETF+RM +WLQEPEFQRM++LRL
Sbjct: 323 RETFKRMSRWLQEPEFQRMASLRL 346
Score = 91 (37.1 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 28/83 (33%), Positives = 36/83 (43%)
Query: 105 HAEPTYQTLTNVNGRLXXXXXXXXXXXATLTPLQPLPPISTMSDKFAYGH------TGNV 158
H PTY + + G TLTPLQP DKF + H NV
Sbjct: 51 HQSPTYDHMATL-GYSRDAPTTCGSTYTTLTPLQPF------DDKFHHHHHHPCLPVSNV 103
Query: 159 TGSFTVMQNNIGLGINSHYTYDK 181
GSFT+M+ + LG N + +Y K
Sbjct: 104 IGSFTLMREDRSLGGNYYTSYGK 126
>ZFIN|ZDB-GENE-040426-1469 [details] [associations]
symbol:onecut1 "one cut domain, family member 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001889 "liver development" evidence=IMP]
[GO:0035622 "intrahepatic bile duct development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 ZFIN:ZDB-GENE-040426-1469
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:1.10.260.40 SUPFAM:SSF47413
GeneTree:ENSGT00530000063019 GO:GO:0035622 CTD:3175
HOVERGEN:HBG005981 KO:K08026 OMA:QMEEVNT EMBL:BX908748
EMBL:BC056601 IPI:IPI00506676 RefSeq:NP_956867.1 UniGene:Dr.119167
SMR:Q6PHC9 STRING:Q6PHC9 Ensembl:ENSDART00000010177 GeneID:393545
KEGG:dre:393545 InParanoid:Q6PHC9 NextBio:20814566 Uniprot:Q6PHC9
Length = 461
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 107/220 (48%), Positives = 130/220 (59%)
Query: 224 KSLSP-NSYDSPYNQRDLVDRSVLGGGSQSPTLSPNEGSLHSSPTTLVTNFQGAATIPTM 282
+ L+P N+ SPY+ +D+ G S SP +H+S L AT+P
Sbjct: 147 RGLAPMNNLYSPYH-KDVASM----GQSLSPLSGSGLSGIHNSQQGLPPYAHPGATMPAE 201
Query: 283 NGITT--ITPHTVVVSPQTSPQHSLISNQLQRSDSP---GPPKIISQQXXXXXXXXXXXX 337
+T H + + QH S+ + P ++ Q
Sbjct: 202 KMLTPNGFEAHHPAMLARHGEQHMSASSASMVPINVIHHHPHAHLNAQGHGQVLGSTREQ 261
Query: 338 N--AVVGAVSLGN---SGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSD 392
N +V G+ L N SG++EE+NTKE+AQRI+ ELKRYSIPQAIFAQRVLCRSQGTLSD
Sbjct: 262 NHSSVPGS-QLNNGSSSGQMEEVNTKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSD 320
Query: 393 LLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAG 432
LLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAG
Sbjct: 321 LLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAG 360
Score = 179 (68.1 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 58/174 (33%), Positives = 87/174 (50%)
Query: 83 ISPSGISVSVASIMDSSEFRNLHAEPTYQTL-TNVNGRLXXX-----XXXXXXXXATLTP 136
+S S+ +ASI+DS ++ + H P + L T+++ + TLTP
Sbjct: 42 LSAHARSMGMASILDSGDYHH-HRPPEHPGLATHLHPAMSMACEAPPGMSMSSTYTTLTP 100
Query: 137 LQPLPPISTMSDKFAYGH--------------TGNVTGSFTVMQNNIGLG-INSHYT-YD 180
LQPLPPIST+SDKF + H GNV+GSFT+M+++ GL +N+ Y+ Y
Sbjct: 101 LQPLPPISTVSDKFPHHHHHHHHHHHHPHQRIPGNVSGSFTLMRDDRGLAPMNNLYSPYH 160
Query: 181 KIQMSPPQHYSPNNGLSTIVITQENSPLSPQSTYSQNGLNSP-QKSLSPNSYDS 233
K S Q SP +G I L P Y+ G P +K L+PN +++
Sbjct: 161 KDVASMGQSLSPLSGSGLSGIHNSQQGLPP---YAHPGATMPAEKMLTPNGFEA 211
>ZFIN|ZDB-GENE-120215-73 [details] [associations]
symbol:si:ch1073-41k10.1 "si:ch1073-41k10.1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 ZFIN:ZDB-GENE-120215-73 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
EMBL:CU896635 Ensembl:ENSDART00000151049 Uniprot:I3IT10
Length = 459
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 109/211 (51%), Positives = 128/211 (60%)
Query: 229 NSYDSPYNQRDLVDRSVLGGGSQSPTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGITTI 288
N+ SPY++ D S +G S SP L GS+HS+ TL N+ G + + N
Sbjct: 171 NNLYSPYHK----DMSGMGQ-SLSP-LGNGLGSIHSAQPTL-HNY-GHDKMLSSN----F 218
Query: 289 TPHTVVVSPQTS--------PQHSLISNQLQRSDSPGPPKIISQQXXXXXXXXXXXXNAV 340
HT ++S P ++ + PG P ++
Sbjct: 219 DAHTAMLSRGDQHLSRGLGGPAAGMMPHLNGMHAHPGHPPSHGPVLASNRDRPLSSSSSS 278
Query: 341 VGAVSLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPW 400
GA SG+LEEINTKE+AQRI+AELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPW
Sbjct: 279 CGAPG---SGQLEEINTKEVAQRITAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPW 335
Query: 401 SKLKSGRETFRRMWKWLQEPEFQRMSALRLA 431
SKLKSGRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 336 SKLKSGRETFRRMWKWLQEPEFQRMSALRLA 366
Score = 145 (56.1 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 73/252 (28%), Positives = 110/252 (43%)
Query: 36 PHDALDLGSNHSSGKDDDNESIKTEGLTVIVAPQDDSRDSEILSPGKISPSGISVSVASI 95
P +D+GS H+ G + + + + P R + LS S S + S+ASI
Sbjct: 20 PEMTMDIGSLHA-GVSHEQDLMSSHSPHHSRNPGAALRIHQDLSVAP-SRSAMVSSMASI 77
Query: 96 MDSS-------EFRNLHAEPTYQTLTNVNGRLXXXXXXXXXXXATLTPLQPLPPISTMSD 148
+D E+R + P + ++ TLTPLQPLPPIST+SD
Sbjct: 78 LDGGGGGGGGGEYRPELSLPLHHAMSMP---CDTSPPGMSGTYTTLTPLQPLPPISTVSD 134
Query: 149 KFAYGH----------TGNVTGSFTVMQNNIGL-GINSHYT-YDKIQMSPPQHYSP-NNG 195
KF + H +GNV+GSFT+M++ L +N+ Y+ Y K Q SP NG
Sbjct: 135 KFHHPHHHHHHHHQRLSGNVSGSFTLMRDERTLPAMNNLYSPYHKDMSGMGQSLSPLGNG 194
Query: 196 LSTIVITQENSPLSPQSTYSQNGLNSPQKSLSPNSYDSPYNQRDLVDRSVLGG-GSQSPT 254
L +I S Q T G + K LS N +D+ D+ + G G +
Sbjct: 195 LGSIH--------SAQPTLHNYGHD---KMLSSN-FDAHTAMLSRGDQHLSRGLGGPAAG 242
Query: 255 LSPNEGSLHSSP 266
+ P+ +H+ P
Sbjct: 243 MMPHLNGMHAHP 254
>UNIPROTKB|F1P9A2 [details] [associations]
symbol:ONECUT2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0001952 "regulation of cell-matrix adhesion"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0048935 "peripheral nervous system neuron development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IEA] [GO:0042384 "cilium assembly"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0045944 GO:GO:0001889 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030335 GO:GO:0042384
GO:GO:0031018 GO:GO:0045165 Gene3D:1.10.260.40 SUPFAM:SSF47413
GO:GO:0030512 GO:GO:0002064 GO:GO:0001952 GO:GO:0048935
GeneTree:ENSGT00530000063019 CTD:9480 EMBL:AAEX03000124
EMBL:AAEX03000125 RefSeq:XP_541087.2 Ensembl:ENSCAFT00000000210
GeneID:483967 KEGG:cfa:483967 OMA:XEAHHTA Uniprot:F1P9A2
Length = 307
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 80/86 (93%), Positives = 84/86 (97%)
Query: 346 LGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 405
+ SG+LEEINTKE+AQRI+AELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS
Sbjct: 127 VATSGQLEEINTKEVAQRITAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKS 186
Query: 406 GRETFRRMWKWLQEPEFQRMSALRLA 431
GRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 187 GRETFRRMWKWLQEPEFQRMSALRLA 212
>RGD|1591005 [details] [associations]
symbol:LOC690827 "similar to one cut domain, family member 3"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0043565
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 Gene3D:1.10.260.40 SUPFAM:SSF47413
GeneTree:ENSGT00530000063019 IPI:IPI00768378
Ensembl:ENSRNOT00000046427 Uniprot:F1M0F1
Length = 232
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 78/90 (86%), Positives = 82/90 (91%)
Query: 342 GAVSLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWS 401
G+ G EEINTKE+AQRI+AELKRYSIPQAIFAQR+LCRSQGTLSDLLRNPKPWS
Sbjct: 47 GSGGPGAGAAAEEINTKEVAQRITAELKRYSIPQAIFAQRILCRSQGTLSDLLRNPKPWS 106
Query: 402 KLKSGRETFRRMWKWLQEPEFQRMSALRLA 431
KLKSGRETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 107 KLKSGRETFRRMWKWLQEPEFQRMSALRLA 136
>UNIPROTKB|G3MX15 [details] [associations]
symbol:ONECUT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 EMBL:DAAA02020281
Ensembl:ENSBTAT00000064922 OMA:YGAPSHL Uniprot:G3MX15
Length = 256
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 77/85 (90%), Positives = 80/85 (94%)
Query: 347 GNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSG 406
G EEINTKE+AQRI+AELKRYSIPQAIFAQR+LCRSQGTLSDLLRNPKPWSKLKSG
Sbjct: 75 GAGAAAEEINTKEVAQRITAELKRYSIPQAIFAQRILCRSQGTLSDLLRNPKPWSKLKSG 134
Query: 407 RETFRRMWKWLQEPEFQRMSALRLA 431
RETFRRMWKWLQEPEFQRMSALRLA
Sbjct: 135 RETFRRMWKWLQEPEFQRMSALRLA 159
>WB|WBGene00000459 [details] [associations]
symbol:ceh-38 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
eggNOG:NOG307335 EMBL:FO080140 RefSeq:NP_741017.1
RefSeq:NP_741018.1 UniGene:Cel.5360 ProteinModelPortal:Q19720
SMR:Q19720 IntAct:Q19720 STRING:Q19720 PaxDb:Q19720 PRIDE:Q19720
EnsemblMetazoa:F22D3.1b GeneID:174136 KEGG:cel:CELE_F22D3.1
UCSC:F22D3.1b CTD:174136 WormBase:F22D3.1a WormBase:F22D3.1b
HOGENOM:HOG000019385 InParanoid:Q19720 OMA:STQDSND NextBio:882681
Uniprot:Q19720
Length = 641
Score = 283 (104.7 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 52/74 (70%), Positives = 65/74 (87%)
Query: 355 INTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMW 414
I+TK+L +RI+ ELK +SIPQAIFA+R+LCRSQGTLSDLLRNPKPW+KLKSGRETFRRM+
Sbjct: 317 IDTKDLCKRIAFELKNHSIPQAIFAERILCRSQGTLSDLLRNPKPWNKLKSGRETFRRMY 376
Query: 415 KWLQEPEFQRMSAL 428
W+ +P R++ L
Sbjct: 377 NWVAQPLATRLAIL 390
Score = 47 (21.6 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 258 NEGSLHSSPTTLVTNFQG---AATIPTMNGITTITPHTVVVSPQTS 300
N L P++ N G A +P N + TI+PH + S TS
Sbjct: 21 NTDYLQIDPSSTFINNTGRGFAEELPE-NFLDTISPHPITPSASTS 65
>WB|WBGene00000444 [details] [associations]
symbol:ceh-21 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
EMBL:AJ427855 EMBL:FO080541 EMBL:AF023470 PIR:T28912 PIR:T42240
RefSeq:NP_508341.2 UniGene:Cel.9167 ProteinModelPortal:Q22811
SMR:Q22811 STRING:Q22811 PaxDb:Q22811 EnsemblMetazoa:T26C11.6
GeneID:180504 KEGG:cel:CELE_T26C11.6 UCSC:T26C11.6.2 CTD:180504
WormBase:T26C11.6 eggNOG:NOG307335 InParanoid:Q22811 NextBio:909656
Uniprot:Q22811
Length = 495
Score = 218 (81.8 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 70/231 (30%), Positives = 119/231 (51%)
Query: 203 QENSPLSP--QSTYSQNGLNSPQKSLSPNSYDSPYNQRDLVDRSVLGGGSQ-SPTLSPN- 258
++ +P S +ST + L QK++ S + + ++ V G SQ +P +
Sbjct: 142 EDEAPQSSRRESTRLKRKLLESQKTVQTTGNSSRASSKSQ-EKEVPGTKSQCAPKIRTTP 200
Query: 259 EGSLHSSPTTLVTNFQGAATI-PTMNGITTIT-P-HTVVVSPQT-SPQHSLISNQLQRSD 314
E S ++ T + ++T +++ +T++ P +T T +P+ ++ + Q S
Sbjct: 201 EQSKAATKRQSSTTVRASSTCGSSVSSTSTVSSPDYTAKKGRATETPKLEELAPKKQSSA 260
Query: 315 SPGPPKIISQQXXXXXXXXXXXXNAVVGAVSLGNSGELEEINTKELAQRISAELKRYSIP 374
+P P + NA +G + EE++T ++A+RI +ELK IP
Sbjct: 261 TPKPGGEVCVWDGVQIGDLSAQMNAQIG--------DDEELDTVDIARRILSELKERCIP 312
Query: 375 QAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQ-EPEFQR 424
Q A+++L RSQGTLSDLLR PKPWS +K+GR TF+RM WL +P+ +R
Sbjct: 313 QTALAEKILARSQGTLSDLLRMPKPWSVMKNGRATFQRMSNWLGLDPDVRR 363
>WB|WBGene00000460 [details] [associations]
symbol:ceh-39 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0007538 "primary sex determination" evidence=IGI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000794
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
GO:GO:0007538 GO:GO:0043073 EMBL:FO080541 eggNOG:NOG307335
PIR:T28913 RefSeq:NP_508342.1 ProteinModelPortal:Q22812 SMR:Q22812
STRING:Q22812 PaxDb:Q22812 EnsemblMetazoa:T26C11.7 GeneID:180505
KEGG:cel:CELE_T26C11.7 UCSC:T26C11.7 CTD:180505 WormBase:T26C11.7
InParanoid:Q22812 NextBio:909660 Uniprot:Q22812
Length = 399
Score = 203 (76.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 350 GELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRET 409
G+ EE++T+ +A RI ELK IPQA A +VL RSQGTLSDLLR PKPW +K+GR T
Sbjct: 209 GDDEELDTQLIAHRILDELKEQCIPQASLAVKVLGRSQGTLSDLLRKPKPWGIMKNGRGT 268
Query: 410 FRRMWKWLQ-EPEFQR 424
F+RM WL +P +R
Sbjct: 269 FQRMANWLDLDPVVRR 284
>UNIPROTKB|P39881 [details] [associations]
symbol:CUX1 "Homeobox protein cut-like 1" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:1.10.260.40 SUPFAM:SSF47413 eggNOG:NOG325167
EMBL:X69017 PIR:S33121 ProteinModelPortal:P39881 SMR:P39881
STRING:P39881 HOVERGEN:HBG051268 Uniprot:P39881
Length = 975
Score = 158 (60.7 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 353 EEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFR 411
+E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F
Sbjct: 381 QEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFI 440
Query: 412 RMWKWL 417
RM WL
Sbjct: 441 RMQLWL 446
Score = 140 (54.3 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 565 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLSRPKPWHKLSLKGREPFVR 624
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 625 MQLWLNDP 632
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 27/70 (38%), Positives = 46/70 (65%)
Query: 361 AQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRRMWKWLQE 419
++++ +L +++I Q IF VL SQG++S++L PKPW+KL G+E F +M ++L +
Sbjct: 1 SRQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSD 60
Query: 420 PEFQRMSALR 429
Q + ALR
Sbjct: 61 E--QNILALR 68
Score = 55 (24.4 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 32/151 (21%), Positives = 55/151 (36%)
Query: 153 GHTGNVTGSFTVMQNNIGLGINSHYTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQS 212
G GN+T + I S K ++ + P ST + +
Sbjct: 95 GSEGNITTRIRASETGSDEAIKSILEQAKRELQVQKTAEPAQPSSTSSSGTSDDAIRSIL 154
Query: 213 TYSQNGLNSPQKSLSPNSYDSPYNQRDLVDRSVLGGGSQSPTLSPNE--GSLHSSPTTLV 270
++ + + Q +L P +P +Q DL ++L SP L P+ S+ S P L
Sbjct: 155 QQARREMEAQQAALDPALKPAPLSQADL---AIL-----SPKLIPSSPMSSVSSYPP-LA 205
Query: 271 TNFQGAATIPTMNGITTITPHTVVVSPQTSP 301
+ + T P + T P + Q +P
Sbjct: 206 LSLKKPPTAPDTSASTLPNPPALKKESQDAP 236
Score = 43 (20.2 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 91 SVASIMDSSEFRNLHAEPTYQTLTNVNGRLXXXXXXXXXXXATLTPL--QPLPPISTMSD 148
SV S+ D + + +E T +T + + +LT L QP PPI T D
Sbjct: 468 SVTSLQDPLQQGCVSSESTPKTSASCSPA-PESPMSSSESVKSLTELVQQPCPPIETSKD 526
Score = 38 (18.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 17 AHARMSAISRSVVPALVPIPHDALDL 42
A M A ++ PAL P P DL
Sbjct: 157 ARREMEAQQAALDPALKPAPLSQADL 182
>FB|FBgn0004198 [details] [associations]
symbol:ct "cut" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0008587 "imaginal
disc-derived wing margin morphogenesis" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;NAS] [GO:0035277 "spiracle morphogenesis, open
tracheal system" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0007443 "Malpighian tubule morphogenesis"
evidence=NAS;TAS] [GO:0016360 "sensory organ precursor cell fate
determination" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS;TAS] [GO:0008052 "sensory organ boundary
specification" evidence=NAS] [GO:0045165 "cell fate commitment"
evidence=NAS] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=TAS] [GO:0007422 "peripheral nervous system development"
evidence=TAS] [GO:0008585 "female gonad development" evidence=TAS]
[GO:0007417 "central nervous system development" evidence=TAS]
[GO:0007424 "open tracheal system development" evidence=TAS]
[GO:0007469 "antennal development" evidence=IEP;IMP] [GO:0048813
"dendrite morphogenesis" evidence=IGI;IMP;TAS] [GO:0000278 "mitotic
cell cycle" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0030707 "ovarian follicle cell
development" evidence=IMP] [GO:0061332 "Malpighian tubule bud
morphogenesis" evidence=IGI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0048098 "antennal joint development"
evidence=IMP] [GO:0007605 "sensory perception of sound"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0060288 "formation of a
compartment boundary" evidence=IMP] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0008585 EMBL:AE014298 GO:GO:0007422 GO:GO:0007417
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0035277 GO:GO:0000122 GO:GO:0007605 GO:GO:0000976
GO:GO:0030713 Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0000278
GO:GO:0008587 GO:GO:0045746 GO:GO:0070983 KO:K09313
GeneTree:ENSGT00530000063019 EMBL:X07985 PIR:S03170
RefSeq:NP_524764.1 UniGene:Dm.1827 ProteinModelPortal:P10180
SMR:P10180 DIP:DIP-19788N IntAct:P10180 MINT:MINT-941430
STRING:P10180 PaxDb:P10180 PRIDE:P10180 EnsemblMetazoa:FBtr0071068
GeneID:44540 KEGG:dme:Dmel_CG11387 UCSC:CG11387-RA CTD:44540
FlyBase:FBgn0004198 eggNOG:NOG306581 InParanoid:P10180
OrthoDB:EOG4HT77Z ChiTaRS:PCYT1A GenomeRNAi:44540 NextBio:837385
Bgee:P10180 GermOnline:CG11387 GO:GO:0048098 GO:GO:0060288
GO:GO:0061332 Uniprot:P10180
Length = 2175
Score = 169 (64.5 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 60/214 (28%), Positives = 94/214 (43%)
Query: 217 NGLNSPQKSLSPNSYDSPYNQRD------LVDRSVLGGGSQSPTLSPN-EGSLHSSPTTL 269
NG S + + +S S +RD L R GGG+ +P P+ G+ +P T
Sbjct: 1195 NGQRSSLEHSAGSSSCSKDGERDDAYPSSLHGRKSEGGGTPAPPAPPSGPGTGAGAPPTA 1254
Query: 270 VTNFQGAATIPTMNGITTITPHTVVVSPQTSPQ---HSLISNQLQRSDSPGPPKIISQQX 326
GA++ N ++ P S Q + ++ LQR S I
Sbjct: 1255 APPTGGASS----NSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPV 1310
Query: 327 XXXXXXXXXXXNAVVGAVSLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRS 386
AV+ ++ +NT+++ +R+ L +YSI Q +F + VL S
Sbjct: 1311 TPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLS 1370
Query: 387 QGTLSDLLRNPKPWSKL-KSGRETFRRMWKWLQE 419
QG++SDLL PKPW L + GRE F RM +L++
Sbjct: 1371 QGSVSDLLARPKPWHMLTQKGREPFIRMKMFLED 1404
Score = 139 (54.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/65 (40%), Positives = 45/65 (69%)
Query: 353 EEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFR 411
+ ++T +++R+ L ++I Q +FA+ +L SQGT+S+LL PKPW KL + GR+++R
Sbjct: 884 QALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYR 943
Query: 412 RMWKW 416
+M W
Sbjct: 944 KMHAW 948
Score = 135 (52.6 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 353 EEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFR 411
++++T ++ +I L +I Q IF + VL SQG++S+LL PKPW L GRE F
Sbjct: 1615 QDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFI 1674
Query: 412 RMWKWLQEPE-FQRMSALR 429
RM WL + +R+ L+
Sbjct: 1675 RMQLWLSDANNVERLQLLK 1693
>RGD|620618 [details] [associations]
symbol:Cux1 "cut-like homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0000301 "retrograde transport, vesicle
recycling within Golgi" evidence=IMP] [GO:0001822 "kidney
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0030173 "integral to
Golgi membrane" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA;ISO] [GO:0030674 "protein binding, bridging"
evidence=IPI] [GO:0042491 "auditory receptor cell differentiation"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
RGD:620618 GO:GO:0005634 GO:GO:0000139 GO:GO:0030324 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 Gene3D:1.10.260.40 SUPFAM:SSF47413
eggNOG:NOG325167 GO:GO:0042491 GO:GO:0000301 HOVERGEN:HBG051268
EMBL:U09229 IPI:IPI00769084 PIR:B53689 UniGene:Rn.10455
ProteinModelPortal:P53565 SMR:P53565 MINT:MINT-4573965
STRING:P53565 PhosphoSite:P53565 PRIDE:P53565 UCSC:RGD:620618
HOGENOM:HOG000143386 InParanoid:P53565 ArrayExpress:P53565
Genevestigator:P53565 GermOnline:ENSRNOG00000001424 Uniprot:P53565
Length = 862
Score = 158 (60.7 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 353 EEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFR 411
+E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F
Sbjct: 283 QEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFI 342
Query: 412 RMWKWL 417
RM WL
Sbjct: 343 RMQLWL 348
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 467 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVR 526
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 527 MQLWLNDP 534
>UNIPROTKB|F1PM17 [details] [associations]
symbol:CUX1 "Homeobox protein cut-like 1" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 OMA:PPIETSK
EMBL:AAEX03004255 EMBL:AAEX03004256 Ensembl:ENSCAFT00000021817
Uniprot:F1PM17
Length = 1499
Score = 160 (61.4 bits), Expect = 8.8e-07, Sum P(3) = 8.8e-07
Identities = 36/86 (41%), Positives = 57/86 (66%)
Query: 345 SLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK 404
S G+ E EEI+T E+A+++ +L +++I Q IF VL SQG++S++L PKPW+KL
Sbjct: 535 SAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLT 594
Query: 405 -SGRETFRRMWKWLQEPEFQRMSALR 429
G+E F +M ++L + Q + ALR
Sbjct: 595 VRGKEPFHKMKQFLSDE--QNILALR 618
Score = 158 (60.7 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 353 EEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFR 411
+E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F
Sbjct: 931 QEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFI 990
Query: 412 RMWKWL 417
RM WL
Sbjct: 991 RMQLWL 996
Score = 140 (54.3 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 1115 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVR 1174
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1175 MQLWLNDP 1182
Score = 56 (24.8 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 32/151 (21%), Positives = 55/151 (36%)
Query: 153 GHTGNVTGSFTVMQNNIGLGINSHYTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQS 212
G GN+T + I S K ++ + P ST + +
Sbjct: 645 GSEGNITTRIRASETGSDEAIKSILEQAKRELQVQKTAEPAQPSSTSSSGSSDDAIRSIL 704
Query: 213 TYSQNGLNSPQKSLSPNSYDSPYNQRDLVDRSVLGGGSQSPTLSPNE--GSLHSSPTTLV 270
++ + + Q +L P +P +Q DL ++L SP L P+ S+ S P L
Sbjct: 705 QQARREMEAQQAALDPALKPAPLSQADL---AIL-----SPKLIPSSPMSSVSSYPP-LA 755
Query: 271 TNFQGAATIPTMNGITTITPHTVVVSPQTSP 301
+ + T P + T P + Q +P
Sbjct: 756 LSLKKPPTAPDTSASTLPNPPALKKESQDAP 786
Score = 43 (20.2 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 91 SVASIMDSSEFRNLHAEPTYQTLTNVNGRLXXXXXXXXXXXATLTPL--QPLPPISTMSD 148
SV S+ D + + +E T +T + + +LT L QP PPI T D
Sbjct: 1018 SVTSLQDPLQQGCVSSESTPKTSASCSPA-PESPMSSSESVKSLTELVQQPCPPIETSKD 1076
Score = 42 (19.8 bits), Expect = 8.8e-07, Sum P(3) = 8.8e-07
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 211 QSTYS----QNGLNSPQKSLSPNSYDSPYNQRDLVDRSVLGGGSQSPTLSPNEGSL 262
QS YS + G S S P S +S +Q L + G + SP+ S + GS+
Sbjct: 484 QSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSV 539
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 18/79 (22%), Positives = 33/79 (41%)
Query: 247 GGGSQSPTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGITTITPHTVVVSPQTSPQHSLI 306
GGGSQ P ++ SS + + A + + + ++T + +PQ SP S
Sbjct: 847 GGGSQ-PRADRSQLQGPSSSSEYWKEWPSAESPYSQSSELSLTGASRSETPQNSPLPSSP 905
Query: 307 SNQLQRSDSPGPPKIISQQ 325
+ + P P + +Q
Sbjct: 906 IVPMSKPAKPSVPPLTPEQ 924
Score = 38 (18.4 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 17 AHARMSAISRSVVPALVPIPHDALDL 42
A M A ++ PAL P P DL
Sbjct: 707 ARREMEAQQAALDPALKPAPLSQADL 732
Score = 37 (18.1 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 5 EDGSLSEEIDNAAHARMSAISRSVVPALVPIPHDALDLG 43
E +LS+ A A ++ R + VP P ALDLG
Sbjct: 58 EIDALSKRSKEAEAAFLNVYKRLID---VPDPVPALDLG 93
>RGD|1305967 [details] [associations]
symbol:Cux2 "cut-like homeobox 2" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0071310 "cellular response to
organic substance" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 RGD:1305967 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 IPI:IPI00869614
Ensembl:ENSRNOT00000001697 UCSC:RGD:1305967 ArrayExpress:F1M048
Uniprot:F1M048
Length = 1425
Score = 159 (61.0 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRR 412
E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F R
Sbjct: 837 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIR 896
Query: 413 MWKWLQE 419
M WL +
Sbjct: 897 MQLWLSD 903
Score = 142 (55.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 32/84 (38%), Positives = 53/84 (63%)
Query: 347 GNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-S 405
G E E+++T E+A ++ +L +++I Q +F VL SQG++S++L PKPW KL
Sbjct: 482 GAGPEEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVK 541
Query: 406 GRETFRRMWKWLQEPEFQRMSALR 429
G+E F +M ++L + Q + ALR
Sbjct: 542 GKEPFIKMKQFLSDE--QNVLALR 563
Score = 141 (54.7 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 990 ELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVR 1049
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1050 MRLWLSDP 1057
>UNIPROTKB|D4A0B5 [details] [associations]
symbol:D4A0B5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0071310 "cellular response to
organic substance" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GO:GO:0071310 OrthoDB:EOG4K9BBG IPI:IPI00950123
Ensembl:ENSRNOT00000064837 ArrayExpress:D4A0B5 Uniprot:D4A0B5
Length = 1428
Score = 159 (61.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRR 412
E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F R
Sbjct: 840 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIR 899
Query: 413 MWKWLQE 419
M WL +
Sbjct: 900 MQLWLSD 906
Score = 142 (55.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 32/84 (38%), Positives = 53/84 (63%)
Query: 347 GNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-S 405
G E E+++T E+A ++ +L +++I Q +F VL SQG++S++L PKPW KL
Sbjct: 485 GAGPEEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVK 544
Query: 406 GRETFRRMWKWLQEPEFQRMSALR 429
G+E F +M ++L + Q + ALR
Sbjct: 545 GKEPFIKMKQFLSDE--QNVLALR 566
Score = 141 (54.7 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 993 ELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVR 1052
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1053 MRLWLSDP 1060
>ZFIN|ZDB-GENE-030131-5868 [details] [associations]
symbol:cux1a "cut-like homeobox 1a" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
ZFIN:ZDB-GENE-030131-5868 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 EMBL:AL935293
EMBL:CU896692 EMBL:CU929186 EMBL:FP245466 IPI:IPI00832234
Ensembl:ENSDART00000081170 Uniprot:E7F4J9
Length = 1495
Score = 157 (60.3 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 34/84 (40%), Positives = 56/84 (66%)
Query: 347 GNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-S 405
G++ E EE++T E+A+++ +L +++I Q +F VL SQG++S++L PKPWSKL
Sbjct: 576 GSTSEGEEMDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIR 635
Query: 406 GRETFRRMWKWLQEPEFQRMSALR 429
G+E F +M +L + Q + ALR
Sbjct: 636 GKEPFHKMKHFLSDE--QNILALR 657
Score = 151 (58.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 353 EEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFR 411
+E++T +L Q++ +L + I Q IF ++VL SQG++SD+L PK WSKL + GRE F
Sbjct: 1007 QEVDTVDLTQQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFI 1066
Query: 412 RMWKWL 417
RM WL
Sbjct: 1067 RMQLWL 1072
Score = 137 (53.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +++ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 1162 ELDTYVITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVR 1221
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1222 MQLWLSDP 1229
Score = 50 (22.7 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 187 PQHYSPNNGLSTIVITQENSPLSPQSTYSQ--NGLN-SPQKS 225
P HY+ N LS SPL PQS S NG+ SP +S
Sbjct: 539 PPHYATTNSLS--------SPLPPQSAGSPEVNGMAPSPSQS 572
Score = 37 (18.1 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 209 SPQSTYSQNGLNSPQKSLSPNSYDSP 234
SP S S+ L P S +P S P
Sbjct: 952 SPYSQSSELSLQMPSGSETPQSSPLP 977
>ZFIN|ZDB-GENE-081104-176 [details] [associations]
symbol:cux2b "cut-like homeobox 2b" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
ZFIN:ZDB-GENE-081104-176 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 EMBL:BX004972
EMBL:CR376829 EMBL:CU372925 EMBL:CU634020 IPI:IPI00494075
Ensembl:ENSDART00000142846 Uniprot:F1QKQ1
Length = 1353
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRR 412
E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F R
Sbjct: 801 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIR 860
Query: 413 MWKWL 417
M WL
Sbjct: 861 MQLWL 865
Score = 143 (55.4 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 304 SLISNQLQRSDSPGPPKIISQQXXXXXXXXXXXXNAVVGAVSLGNSGELEEINTKELAQR 363
SL + + P PP+ + + +G L E++T + +R
Sbjct: 913 SLALESSKENQQPQPPQPLEPHGVKSSVMIPQQTHTPLGIQELVAMSP--ELDTYAITKR 970
Query: 364 ISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRRMWKWLQEP 420
+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F RM WL +P
Sbjct: 971 VKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDP 1028
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 350 GELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRE 408
G+ ++++T E+A ++ +L +++I Q +F VL SQG++S++L PKPW KL G+E
Sbjct: 446 GDDDQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKE 505
Query: 409 TFRRMWKWLQEPEFQRMSALR 429
F +M ++L + Q + ALR
Sbjct: 506 PFIKMKQFLSDE--QNILALR 524
>UNIPROTKB|F1NGM5 [details] [associations]
symbol:CUX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0042491 "auditory
receptor cell differentiation" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 EMBL:AADN02025980
IPI:IPI00578637 Ensembl:ENSGALT00000002792 Uniprot:F1NGM5
Length = 972
Score = 158 (60.7 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 353 EEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFR 411
+E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F
Sbjct: 379 QEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFI 438
Query: 412 RMWKWL 417
RM WL
Sbjct: 439 RMQLWL 444
Score = 141 (54.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 47/172 (27%), Positives = 76/172 (44%)
Query: 250 SQSPTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGITTITPHTVVVSPQTSPQHSLISNQ 309
S +L S S+P T + A P M+ ++ T +V Q P S+ +N+
Sbjct: 469 SLQDSLQQGCASSESTPKTSAS-CSPAPESP-MSSSESVKSLTELVQ-QPCP--SIETNK 523
Query: 310 LQRSDSPGPPKIISQQXXXXXXXXXXXXNAVVGAVSLGNSGELEEINTKELAQRISAELK 369
+ P P Q ++ V++ E++T + +R+ L
Sbjct: 524 DGKGQEPSEPPASESQSTTPLPLSGHSALSIQELVAMS-----PELDTYGITKRVKEVLT 578
Query: 370 RYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRRMWKWLQEP 420
++ Q +F + +L +QG++SDLL PKPW KL GRE F RM WL +P
Sbjct: 579 DNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDP 630
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 361 AQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRRMWKWLQE 419
A+++ +L +++I Q IF VL SQG++S++L PKPW+KL G+E F +M ++L +
Sbjct: 1 ARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSD 60
Query: 420 PEFQRMSALR 429
Q + ALR
Sbjct: 61 E--QNILALR 68
Score = 46 (21.3 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 33/170 (19%), Positives = 58/170 (34%)
Query: 153 GHTGNVTGSFTVMQNNIGLGINSHYTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQS 212
G GN+T + I S K ++ + P S + +
Sbjct: 95 GSEGNITTRIRTTETGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIRSIL 154
Query: 213 TYSQNGLNSPQKSLSPNSYDSPYNQRD-------LVDRSVLGGGSQSPTLS---PNEGSL 262
++ + + Q +L P +P +Q D LV S + S P L+ S+
Sbjct: 155 QQARREMEAQQAALDPALKTTPLSQADISILSPKLVSTSAMSSVSSYPPLAISLKKHSSV 214
Query: 263 HSSPTTLVTNFQGAATIPTMNGITTITPHTVVVSPQTSPQHSLISNQLQR 312
S + + N G P + + H + S Q +H + N+L R
Sbjct: 215 TDSSISALQNLSGLKKEPQEAPVLEL--HGISDSAQGMLRH--VKNELGR 260
Score = 39 (18.8 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 74 DSEILSPGKISPSGISVSVASIMDSSEFRNLHAEPT---YQTLTNVNG 118
D ILSP +S S +S SV+S + H+ T L N++G
Sbjct: 181 DISILSPKLVSTSAMS-SVSSYPPLAISLKKHSSVTDSSISALQNLSG 227
Score = 37 (18.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 296 SPQTSPQHSLISNQLQRSDSPGPPKIISQQ 325
+PQ SP S L + P P + +Q
Sbjct: 343 TPQNSPLPSSPIVSLSKPSKPSVPPLTPEQ 372
>UNIPROTKB|F1RKF9 [details] [associations]
symbol:LOC100622173 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0042491 "auditory receptor cell differentiation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR003350 InterPro:IPR010982 Pfam:PF02376
PROSITE:PS51042 GO:GO:0003677 Gene3D:1.10.260.40 SUPFAM:SSF47413
GeneTree:ENSGT00530000063019 OMA:PPIETSK EMBL:CU914498
Ensembl:ENSSSCT00000008422 Uniprot:F1RKF9
Length = 1123
Score = 160 (61.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 36/86 (41%), Positives = 57/86 (66%)
Query: 345 SLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK 404
S G+ E EEI+T E+A+++ +L +++I Q IF VL SQG++S++L PKPW+KL
Sbjct: 452 SAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLT 511
Query: 405 -SGRETFRRMWKWLQEPEFQRMSALR 429
G+E F +M ++L + Q + ALR
Sbjct: 512 VRGKEPFHKMKQFLSDE--QNILALR 535
Score = 158 (60.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 353 EEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFR 411
+E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F
Sbjct: 856 QEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFI 915
Query: 412 RMWKWL 417
RM WL
Sbjct: 916 RMQLWL 921
Score = 140 (54.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 1041 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVR 1100
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1101 MQLWLNDP 1108
Score = 43 (20.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 17/88 (19%), Positives = 31/88 (35%)
Query: 153 GHTGNVTGSFTVMQNNIGLGINSHYTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQS 212
G GN+T + I S K ++ + P ST + +
Sbjct: 562 GSEGNITTRIRASETGSDEAIKSILEQAKRELQVQKTAEPAQPSSTASGGNSDDAIRSIL 621
Query: 213 TYSQNGLNSPQKSLSPNSYDSPYNQRDL 240
++ + + Q +L P +P +Q DL
Sbjct: 622 QQARREMEAQQAALDPALKQAPLSQADL 649
Score = 43 (20.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 91 SVASIMDSSEFRNLHAEPTYQTLTNVNGRLXXXXXXXXXXXATLTPL--QPLPPISTMSD 148
SV S+ D + + +E T +T + + +LT L QP PPI T D
Sbjct: 943 SVTSLQDPLQQGCVSSESTPKTSASCSPA-PESPMSSSESVKSLTELVQQPCPPIDTSKD 1001
Score = 42 (19.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 211 QSTYS----QNGLNSPQKSLSPNSYDSPYNQRDLVDRSVLGGGSQSPTLSPNEGSL 262
QS YS + G S S P S +S +Q L + G + SP+ S + GS+
Sbjct: 401 QSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSV 456
>UNIPROTKB|E1BXL9 [details] [associations]
symbol:E1BXL9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0071310 "cellular response to
organic substance" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GO:GO:0071310 GeneTree:ENSGT00530000063019
OMA:LVFPPAF EMBL:AADN02034916 EMBL:AADN02034917 IPI:IPI00603354
Ensembl:ENSGALT00000007319 Uniprot:E1BXL9
Length = 1251
Score = 159 (61.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 34/74 (45%), Positives = 49/74 (66%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRR 412
E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F R
Sbjct: 912 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIR 971
Query: 413 MWKWLQEPEFQRMS 426
M WL + Q +S
Sbjct: 972 MQLWLTDQLGQGIS 985
Score = 145 (56.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 31/84 (36%), Positives = 55/84 (65%)
Query: 347 GNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-S 405
G+S + E+++T ++A ++ +L +++I Q +F VL SQG++S++L PKPW KL
Sbjct: 533 GSSADEEQLDTADIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVK 592
Query: 406 GRETFRRMWKWLQEPEFQRMSALR 429
G+E F +M ++L + Q + ALR
Sbjct: 593 GKEPFIKMKQFLSDE--QNVLALR 614
Score = 145 (56.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 62/230 (26%), Positives = 100/230 (43%)
Query: 194 NGLSTIVITQENSPLSPQSTYSQNGLNSPQKSLSPNSYDSPYNQRDLVDRSVLGGG-SQS 252
NG+ + ++ LS S P L+ + P+ + L LG G SQ
Sbjct: 929 NGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGRE-PFIRMQLWLTDQLGQGISQQ 987
Query: 253 PTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGITTITPHTVVVSPQTSPQHSLISNQLQR 312
PT P++ + S P+ ++FQ P + IT+ SP SP +Q
Sbjct: 988 PT--PSQ--VQSRPSDTSSSFQ-----PPL--ITSPAEPQPSPSPPPSPTEHEKGSQEPL 1036
Query: 313 SDSPGPPKIISQQXXXXXXXXXXXXNAVVGAVSLGNSGELE-EINTKELAQRISAELKRY 371
+ + K +QQ N+ G V + + E++T + +++ L
Sbjct: 1037 TLALESSKE-NQQPEGRVVAGKAHPNSQ-GPVGIQEIVAMSPELDTYSITKKVKEVLTDN 1094
Query: 372 SIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRRMWKWLQEP 420
++ Q +F + +L +QG++SDLL PKPW KL GRE F RM WL +P
Sbjct: 1095 NLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDP 1144
Score = 44 (20.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 16/51 (31%), Positives = 19/51 (37%)
Query: 19 ARMSAISRSVVPALVPIPHDALDLGSNHSSGKDDDNESIKTEGLTVIVAPQ 69
A A S SV P VP D + S G D E + T + V Q
Sbjct: 503 AFFGAKSSSVPPNTVPPTTSPPDEPAEGSGGSSADEEQLDTADIAFQVKEQ 553
>UNIPROTKB|F1N693 [details] [associations]
symbol:LOC100848036 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042491
"auditory receptor cell differentiation" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030324 GO:GO:0043565 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 GO:GO:0042491
OMA:PPIETSK EMBL:DAAA02058209 EMBL:DAAA02058210 EMBL:DAAA02058211
EMBL:DAAA02058212 EMBL:DAAA02058213 EMBL:DAAA02058214
EMBL:DAAA02058215 EMBL:DAAA02058216 EMBL:DAAA02058217
EMBL:DAAA02058218 EMBL:DAAA02058219 EMBL:DAAA02058220
EMBL:DAAA02058221 EMBL:DAAA02058222 EMBL:DAAA02058223
IPI:IPI01003286 Ensembl:ENSBTAT00000014098 Uniprot:F1N693
Length = 1460
Score = 160 (61.4 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 36/86 (41%), Positives = 57/86 (66%)
Query: 345 SLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK 404
S G+ E EEI+T E+A+++ +L +++I Q IF VL SQG++S++L PKPW+KL
Sbjct: 478 SAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLT 537
Query: 405 -SGRETFRRMWKWLQEPEFQRMSALR 429
G+E F +M ++L + Q + ALR
Sbjct: 538 VRGKEPFHKMKQFLSDE--QNILALR 561
Score = 158 (60.7 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 353 EEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFR 411
+E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F
Sbjct: 874 QEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFI 933
Query: 412 RMWKWL 417
RM WL
Sbjct: 934 RMQLWL 939
Score = 140 (54.3 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 1058 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVR 1117
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1118 MQLWLNDP 1125
Score = 46 (21.3 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 280 PTMNGITTITPHTVVVSPQTS-PQHSLISNQLQRSDS 315
P+ IT +TP + SP +S +S ++ L++ S
Sbjct: 670 PSQTDITLLTPKLIPASPMSSVSSYSPLAVSLKKPPS 706
Score = 43 (20.2 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 91 SVASIMDSSEFRNLHAEPTYQTLTNVNGRLXXXXXXXXXXXATLTPL--QPLPPISTMSD 148
SV S+ D + + +E T +T + + +LT L QP PPI T D
Sbjct: 961 SVTSLQDPLQQGCVSSESTPKTSASCSPA-PESPMSSSESVKSLTELVQQPCPPIETSKD 1019
Score = 42 (19.8 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 211 QSTYS----QNGLNSPQKSLSPNSYDSPYNQRDLVDRSVLGGGSQSPTLSPNEGSL 262
QS YS + G S S P S +S +Q L + G + SP+ S + GS+
Sbjct: 427 QSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSV 482
Score = 38 (18.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 17 AHARMSAISRSVVPALVPIPHDALDL 42
A M A ++ PAL P P D+
Sbjct: 650 ARREMEAQQAALEPALKPAPPSQTDI 675
>UNIPROTKB|F1MT17 [details] [associations]
symbol:CUX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071310 "cellular
response to organic substance" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0045892
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0071310
GeneTree:ENSGT00530000063019 OMA:LVFPPAF EMBL:DAAA02045287
IPI:IPI00717486 UniGene:Bt.23998 Ensembl:ENSBTAT00000029615
NextBio:20873975 Uniprot:F1MT17
Length = 1502
Score = 159 (61.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRR 412
E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F R
Sbjct: 913 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIR 972
Query: 413 MWKWLQE 419
M WL +
Sbjct: 973 MQLWLSD 979
Score = 147 (56.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 33/89 (37%), Positives = 55/89 (61%)
Query: 342 GAVSLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWS 401
G + G E E+++T E+A ++ +L +++I Q +F VL SQG++S++L PKPW
Sbjct: 551 GMATAGAGTEEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWR 610
Query: 402 KLK-SGRETFRRMWKWLQEPEFQRMSALR 429
KL G+E F +M ++L + Q + ALR
Sbjct: 611 KLTVKGKEPFIKMKQFLSDE--QNVLALR 637
Score = 142 (55.0 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 1065 ELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVR 1124
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1125 MQLWLNDP 1132
Score = 43 (20.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 28/147 (19%), Positives = 54/147 (36%)
Query: 156 GNVTGSFTVMQNNIGLGINSHYTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQSTYS 215
G++T + I S K ++ + P N + + IT +P S S +
Sbjct: 645 GSITPRIRTPETGSDDAIKSILEQAKKEIESQKGGEPKNSAAPLSITNGTAPASTTSEDA 704
Query: 216 -QNGLNSPQKSLSPNSYDSPYNQRDLVDRSVLGGGSQSPTLSPNEGSLHSSPTTLVTNFQ 274
+N L ++ + + RSV + P+L+ S + +PT +
Sbjct: 705 IKNILEQARREMQAQQQALLEMEAGARGRSVPPSPPERPSLAAM--SQNGAPTLVKQEDS 762
Query: 275 GA-----ATIPTMNGITTITPHTVVVS 296
G ++ T +T ++P V S
Sbjct: 763 GVGSGGTSSSGTQTSLTVLSPAAFVQS 789
Score = 39 (18.8 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 1 MEMAEDGSLSEEIDNAAHAR--MSAISRSVVPALVPIPHDALDLGSNHSSG 49
+EM E G+ + + R ++A+S++ P LV + G SSG
Sbjct: 724 LEM-EAGARGRSVPPSPPERPSLAAMSQNGAPTLVKQEDSGVGSGGTSSSG 773
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 189 HYSPNNGLSTIVITQENSPLSPQSTYS--QNGLNSPQKSLSP 228
H++ + GL + + LS S+YS NG P+ +P
Sbjct: 807 HWASDRGLLSRPYASVSPSLSSSSSYSGQPNGRAWPRGDEAP 848
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 216 QNGLNSPQKSLSPNSYDSPYNQRDLVD 242
Q LNS LS +S ++ + L++
Sbjct: 21 QKELNSVASELSARQEESEHSHKHLIE 47
>UNIPROTKB|E2R1M2 [details] [associations]
symbol:CUX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071310
"cellular response to organic substance" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0045892
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0071310 KO:K09313
GeneTree:ENSGT00530000063019 CTD:23316 OMA:LVFPPAF
EMBL:AAEX03014667 EMBL:AAEX03014668 EMBL:AAEX03014669
EMBL:AAEX03014670 RefSeq:XP_543393.3 Ensembl:ENSCAFT00000013611
GeneID:486267 KEGG:cfa:486267 Uniprot:E2R1M2
Length = 1504
Score = 161 (61.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 34/74 (45%), Positives = 49/74 (66%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRR 412
E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F R
Sbjct: 913 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIR 972
Query: 413 MWKWLQEPEFQRMS 426
M WL + Q +S
Sbjct: 973 MQLWLSDQLGQAIS 986
Score = 144 (55.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 32/84 (38%), Positives = 53/84 (63%)
Query: 347 GNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-S 405
G E E+++T E+A ++ +L +++I Q +F VL SQG++S++L PKPW KL
Sbjct: 555 GAGAEEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVK 614
Query: 406 GRETFRRMWKWLQEPEFQRMSALR 429
G+E F +M ++L + Q + ALR
Sbjct: 615 GKEPFIKMKQFLSDE--QNVLALR 636
Score = 142 (55.0 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 1064 ELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVR 1123
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1124 MQLWLNDP 1131
Score = 40 (19.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 27/121 (22%), Positives = 46/121 (38%)
Query: 185 SPPQHYSPNNGLSTIVITQENSPLSPQSTYSQNGLNSPQKSLSPNSYDSPYNQRDLVDRS 244
SP + S ++ + + T+++ P PQ P+ LSP SP + L+
Sbjct: 418 SPEEDPSEDDSIKDSLGTEQSYPSPPQLPPPPG----PEDPLSP----SP--GQPLLGPG 467
Query: 245 VLGGGSQSPTLSP----NEGSLHSSPTTLVTNFQGAATIPTMNGITTITPHTVVVSPQTS 300
+ G ++ +LSP G + L + AT G+ P P T+
Sbjct: 468 LGPDGPRTFSLSPFPSLASGDRLAGDALLSKHMMPPATFKGETGLLVFPPAFYGTKPPTA 527
Query: 301 P 301
P
Sbjct: 528 P 528
Score = 38 (18.4 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 16/67 (23%), Positives = 26/67 (38%)
Query: 215 SQNGLNS-PQKSLSPNSYDSPYNQRDLVDRSVLGGGSQSPTLSPNEGSLHSSPTTLVTNF 273
S GL S P S+SP+ S + + G ++PT +E + + V
Sbjct: 809 SDRGLLSRPYASVSPSLSSSSSSYSGQPNGRAWPRGDEAPTAPEDEAAGGEEEPSRVGEL 868
Query: 274 QGAATIP 280
+ IP
Sbjct: 869 KSEGGIP 875
Score = 37 (18.1 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 216 QNGLNSPQKSLSPNSYDSPYNQRDLVD 242
Q LNS LS +S ++ + L++
Sbjct: 21 QKELNSVASELSARQEESEHSHKHLIE 47
>UNIPROTKB|F1LM15 [details] [associations]
symbol:Cux1 "Homeobox protein cut-like 1" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 RGD:620618 GO:GO:0005634
GO:GO:0005737 GO:GO:0030324 GO:GO:0043565 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
GO:GO:0042491 EMBL:AC091536 EMBL:AC091618 IPI:IPI00370330
Ensembl:ENSRNOT00000001928 ArrayExpress:F1LM15 Uniprot:F1LM15
Length = 1456
Score = 160 (61.4 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 36/86 (41%), Positives = 57/86 (66%)
Query: 345 SLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK 404
S G+ E EEI+T E+A+++ +L +++I Q IF VL SQG++S++L PKPW+KL
Sbjct: 480 SAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLT 539
Query: 405 -SGRETFRRMWKWLQEPEFQRMSALR 429
G+E F +M ++L + Q + ALR
Sbjct: 540 VRGKEPFHKMKQFLSDE--QNILALR 563
Score = 158 (60.7 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 353 EEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFR 411
+E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F
Sbjct: 877 QEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFI 936
Query: 412 RMWKWL 417
RM WL
Sbjct: 937 RMQLWL 942
Score = 140 (54.3 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 1061 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVR 1120
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1121 MQLWLNDP 1128
Score = 47 (21.6 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 25/134 (18%), Positives = 46/134 (34%)
Query: 153 GHTGNVTGSFTVMQNNIGLGINSHYTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQS 212
G GN+T + I S K ++ + P ST + +
Sbjct: 590 GSEGNITTRIRASETGSDEAIKSILEQAKRELQVQKTAEPVQASSTASSGNSDDAIRSIL 649
Query: 213 TYSQNGLNSPQKSLSPNSYDSPYNQRDL--VDRSVLGGGSQSP--TLSPNEGSLHSSPTT 268
++ + + Q +L P +P +Q DL ++ +L S T P SL +P
Sbjct: 650 QQARREMEAQQAALDPALKPAPLSQPDLTILNPKLLSASPMSTVSTYPPLAISLKKTPAA 709
Query: 269 LVTNFQGAATIPTM 282
+ + P +
Sbjct: 710 PEASTSALPSAPAL 723
Score = 42 (19.8 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 20/80 (25%), Positives = 31/80 (38%)
Query: 189 HYSPNNGLSTIVITQE-NSPLSPQSTYSQNGLNSP-QKSLSPNSYDSPYNQRDLVDRSVL 246
H+SP GLS + SP P ++ + LNS Q+ L + Y + ++
Sbjct: 389 HFSPA-GLSQDFFSSNLASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTS-TIF 446
Query: 247 GGGSQSPTLSPNEGSLHSSP 266
G S + L SP
Sbjct: 447 STGPYSTNSISSPSPLQQSP 466
Score = 38 (18.4 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 211 QSTYS----QNGLNSPQKSLSPNSYDSPYNQRDLVDRSVLGGGSQSPTLSPNEGSL 262
QS YS + G S S P S +S + L + G + SP+ S + GS+
Sbjct: 429 QSFYSKAMQEAGSTSTIFSTGPYSTNSISSPSPLQQSPDVNGMAPSPSQSESAGSI 484
Score = 37 (18.1 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 5 EDGSLSEEIDNAAHARMSAISRSVVPALVPIPHDALDLG 43
E +LS+ A A ++ R + VP P ALDLG
Sbjct: 4 EIDALSKRSKEAEAAFLTVYKRLID---VPDPVPALDLG 39
>ZFIN|ZDB-GENE-031204-9 [details] [associations]
symbol:cux2a "cut-like homeobox 2a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
ZFIN:ZDB-GENE-031204-9 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 EMBL:CABZ01076670
EMBL:CABZ01076671 IPI:IPI00613204 Ensembl:ENSDART00000128728
Uniprot:E7EZT3
Length = 643
Score = 148 (57.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + QR+ L ++I Q +F + VL +Q ++S+LL +PKPW+KL G+E F R
Sbjct: 411 ELDTFSITQRVKKTLIVHNIGQRVFGEEVLGLTQSSVSELLSHPKPWTKLSLKGKENFIR 470
Query: 413 MWKWLQEPE-FQRMSA 427
M WL++P Q+++A
Sbjct: 471 MHLWLRDPHSVQKLNA 486
Score = 136 (52.9 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 353 EEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFR 411
+E++T ++ Q++ L+ +I Q F VL SQG++SD+L PKPWSKL + G+E F
Sbjct: 183 QELDTLQVTQQVKQALQSRNIGQRAFGHYVLGLSQGSVSDILARPKPWSKLTRRGKEPFL 242
Query: 412 RMWKWLQEPEFQR 424
RM +L + R
Sbjct: 243 RMKHFLSDEHSMR 255
>UNIPROTKB|F1RMZ4 [details] [associations]
symbol:CUX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071310 "cellular
response to organic substance" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0045892
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0071310
GeneTree:ENSGT00530000063019 OMA:LVFPPAF EMBL:CT737261
Ensembl:ENSSSCT00000010775 Uniprot:F1RMZ4
Length = 1409
Score = 159 (61.0 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRR 412
E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F R
Sbjct: 820 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIR 879
Query: 413 MWKWLQE 419
M WL +
Sbjct: 880 MQLWLSD 886
Score = 150 (57.9 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 33/89 (37%), Positives = 55/89 (61%)
Query: 342 GAVSLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWS 401
G + G E E+++T E+A ++ +L +++I Q +F VL SQG++S++L PKPW
Sbjct: 452 GTATAGAGAEEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWR 511
Query: 402 KLK-SGRETFRRMWKWLQEPEFQRMSALR 429
KL G+E F +M ++L + Q + ALR
Sbjct: 512 KLTVKGKEPFIKMKQFLSDE--QNVLALR 538
Score = 142 (55.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 972 ELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVR 1031
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1032 MQLWLNDP 1039
Score = 39 (18.8 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 42 LGSNHSSGKDDDNESIKTEGLTVIVAPQDDSRDSEILSP--GKISPSG 87
L S+ SS N G AP+D++ SE P G++ G
Sbjct: 732 LSSSSSSYSGQPNGRAWPRGDEAPAAPEDEAAGSEDEPPRVGELKAEG 779
Score = 38 (18.4 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 13/71 (18%), Positives = 26/71 (36%)
Query: 156 GNVTGSFTVMQNNIGLGINSHYTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQSTYS 215
G++T + I S K ++ + P N + + IT +P S
Sbjct: 546 GSITPRIRTPETGSDDAIKSILEQAKKEIESQKGGEPKNSTAPLSITNGTTPASTSEDAI 605
Query: 216 QNGLNSPQKSL 226
+N L ++ +
Sbjct: 606 KNILEQARREM 616
>UNIPROTKB|F1LRC5 [details] [associations]
symbol:Cux1 "Homeobox protein cut-like 1" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 RGD:620618 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00530000063019
IPI:IPI00769084 EMBL:AC091536 EMBL:AC091618
Ensembl:ENSRNOT00000059486 ArrayExpress:F1LRC5 Uniprot:F1LRC5
Length = 1434
Score = 160 (61.4 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 36/86 (41%), Positives = 57/86 (66%)
Query: 345 SLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK 404
S G+ E EEI+T E+A+++ +L +++I Q IF VL SQG++S++L PKPW+KL
Sbjct: 480 SAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLT 539
Query: 405 -SGRETFRRMWKWLQEPEFQRMSALR 429
G+E F +M ++L + Q + ALR
Sbjct: 540 VRGKEPFHKMKQFLSDE--QNILALR 563
Score = 158 (60.7 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 353 EEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFR 411
+E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F
Sbjct: 855 QEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFI 914
Query: 412 RMWKWL 417
RM WL
Sbjct: 915 RMQLWL 920
Score = 140 (54.3 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 1039 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVR 1098
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1099 MQLWLNDP 1106
Score = 43 (20.2 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 24/131 (18%), Positives = 45/131 (34%)
Query: 156 GNVTGSFTVMQNNIGLGINSHYTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQSTYS 215
GN+T + I S K ++ + P ST + + +
Sbjct: 571 GNITTRIRASETGSDEAIKSILEQAKRELQVQKTAEPVQASSTASSGNSDDAIRSILQQA 630
Query: 216 QNGLNSPQKSLSPNSYDSPYNQRDL--VDRSVLGGGSQSP--TLSPNEGSLHSSPTTLVT 271
+ + + Q +L P +P +Q DL ++ +L S T P SL +P
Sbjct: 631 RREMEAQQAALDPALKPAPLSQPDLTILNPKLLSASPMSTVSTYPPLAISLKKTPAAPEA 690
Query: 272 NFQGAATIPTM 282
+ + P +
Sbjct: 691 STSALPSAPAL 701
Score = 42 (19.8 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 20/80 (25%), Positives = 31/80 (38%)
Query: 189 HYSPNNGLSTIVITQE-NSPLSPQSTYSQNGLNSP-QKSLSPNSYDSPYNQRDLVDRSVL 246
H+SP GLS + SP P ++ + LNS Q+ L + Y + ++
Sbjct: 389 HFSPA-GLSQDFFSSNLASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTS-TIF 446
Query: 247 GGGSQSPTLSPNEGSLHSSP 266
G S + L SP
Sbjct: 447 STGPYSTNSISSPSPLQQSP 466
Score = 38 (18.4 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 211 QSTYS----QNGLNSPQKSLSPNSYDSPYNQRDLVDRSVLGGGSQSPTLSPNEGSL 262
QS YS + G S S P S +S + L + G + SP+ S + GS+
Sbjct: 429 QSFYSKAMQEAGSTSTIFSTGPYSTNSISSPSPLQQSPDVNGMAPSPSQSESAGSI 484
Score = 37 (18.1 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 5 EDGSLSEEIDNAAHARMSAISRSVVPALVPIPHDALDLG 43
E +LS+ A A ++ R + VP P ALDLG
Sbjct: 4 EIDALSKRSKEAEAAFLTVYKRLID---VPDPVPALDLG 39
>MGI|MGI:107321 [details] [associations]
symbol:Cux2 "cut-like homeobox 2" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0071310 "cellular response to organic substance"
evidence=IDA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 MGI:MGI:107321 GO:GO:0005634
GO:GO:0045892 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GO:GO:0071310 eggNOG:NOG325167 KO:K09313
GeneTree:ENSGT00530000063019 HOVERGEN:HBG051268
HOGENOM:HOG000143386 CTD:23316 OMA:LVFPPAF OrthoDB:EOG4K9BBG
EMBL:U45665 EMBL:BC065113 IPI:IPI00323964 PIR:T30817
RefSeq:NP_031830.2 UniGene:Mm.156172 UniGene:Mm.332661
ProteinModelPortal:P70298 SMR:P70298 IntAct:P70298 STRING:P70298
PhosphoSite:P70298 PRIDE:P70298 Ensembl:ENSMUST00000086317
Ensembl:ENSMUST00000111752 Ensembl:ENSMUST00000168288 GeneID:13048
KEGG:mmu:13048 InParanoid:Q6P1E6 NextBio:282958 Bgee:P70298
CleanEx:MM_CUX2 Genevestigator:P70298 GermOnline:ENSMUSG00000042589
Uniprot:P70298
Length = 1426
Score = 159 (61.0 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRR 412
E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F R
Sbjct: 836 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIR 895
Query: 413 MWKWLQE 419
M WL +
Sbjct: 896 MQLWLSD 902
Score = 142 (55.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 32/84 (38%), Positives = 53/84 (63%)
Query: 347 GNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-S 405
G E E+++T E+A ++ +L +++I Q +F VL SQG++S++L PKPW KL
Sbjct: 483 GAGPEEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVK 542
Query: 406 GRETFRRMWKWLQEPEFQRMSALR 429
G+E F +M ++L + Q + ALR
Sbjct: 543 GKEPFIKMKQFLSDE--QNVLALR 564
Score = 142 (55.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 991 ELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVR 1050
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1051 MQLWLSDP 1058
Score = 37 (18.1 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 185 SPPQHYSP----NNGLSTIVITQENSPLSPQSTYSQNGLNSPQKSLSPNSY 231
SPP+ SP NG T V ++ S S+ Q +P LSP ++
Sbjct: 664 SPPERPSPATASQNGALTCVKQEDGGGGSGSSSTVQ----APLAVLSPAAF 710
>UNIPROTKB|O14529 [details] [associations]
symbol:CUX2 "Homeobox protein cut-like 2" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0071310 "cellular response to
organic substance" evidence=IEA] [GO:0005634 "nucleus"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02376
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GO:GO:0071310 eggNOG:NOG325167 KO:K09313
HOVERGEN:HBG051268 HOGENOM:HOG000143386 EMBL:AB006631 EMBL:AC005805
EMBL:AC002979 EMBL:AC002352 EMBL:AC002978 EMBL:BC151245
IPI:IPI00022370 RefSeq:NP_056082.2 UniGene:Hs.124953 PDB:1WH6
PDB:1WH8 PDB:1X2L PDBsum:1WH6 PDBsum:1WH8 PDBsum:1X2L
ProteinModelPortal:O14529 SMR:O14529 STRING:O14529
PhosphoSite:O14529 PaxDb:O14529 PRIDE:O14529 DNASU:23316
Ensembl:ENST00000261726 GeneID:23316 KEGG:hsa:23316 UCSC:uc001tsa.2
CTD:23316 GeneCards:GC12P111471 HGNC:HGNC:19347 HPA:HPA044772
MIM:610648 neXtProt:NX_O14529 PharmGKB:PA162382977
InParanoid:O14529 OMA:LVFPPAF OrthoDB:EOG4K9BBG
EvolutionaryTrace:O14529 GenomeRNAi:23316 NextBio:45200
ArrayExpress:O14529 Bgee:O14529 CleanEx:HS_CUX2
Genevestigator:O14529 GermOnline:ENSG00000111249 Uniprot:O14529
Length = 1486
Score = 159 (61.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFRR 412
E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F R
Sbjct: 895 EVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIR 954
Query: 413 MWKWLQE 419
M WL +
Sbjct: 955 MQLWLSD 961
Score = 147 (56.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 33/89 (37%), Positives = 55/89 (61%)
Query: 342 GAVSLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWS 401
G + G E E+++T E+A ++ +L +++I Q +F VL SQG++S++L PKPW
Sbjct: 540 GGGAAGPGAEEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWR 599
Query: 402 KLK-SGRETFRRMWKWLQEPEFQRMSALR 429
KL G+E F +M ++L + Q + ALR
Sbjct: 600 KLTVKGKEPFIKMKQFLSDE--QNVLALR 626
Score = 142 (55.0 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 1046 ELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVR 1105
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1106 MQLWLNDP 1113
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 216 QNGLNSPQKSLSPNSYDSPYNQRDLVD 242
Q LNS LS +S ++ + L++
Sbjct: 21 QKELNSVASELSARQEESEHSHKHLIE 47
>UNIPROTKB|P39880 [details] [associations]
symbol:CUX1 "Homeobox protein cut-like 1" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0000301 "retrograde transport, vesicle recycling within Golgi"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0042491 "auditory receptor
cell differentiation" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0007275 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_116125 GO:GO:0000139 GO:GO:0030324
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 Gene3D:1.10.260.40
SUPFAM:SSF47413 KO:K09313 EMBL:AC005072 EMBL:AC005086 EMBL:AC005088
EMBL:AC005096 EMBL:AC005103 EMBL:AC092788 RefSeq:NP_001189473.1
RefSeq:NP_852477.1 UniGene:Hs.191482 DNASU:1523 GeneID:1523
KEGG:hsa:1523 CTD:1523 GeneCards:GC07P101459 HGNC:HGNC:2557
HPA:HPA003317 MIM:116896 PharmGKB:PA162382924 ChiTaRS:CUX1
GenomeRNAi:1523 NextBio:6303 CleanEx:HS_CUX1 GO:GO:0042491
GO:GO:0000301 HOVERGEN:HBG051268 EMBL:M74099 EMBL:AK122726
EMBL:BC066592 EMBL:AF047825 IPI:IPI00026673 IPI:IPI00419894
IPI:IPI00472247 IPI:IPI00736943 IPI:IPI00741668 IPI:IPI00742111
IPI:IPI00982754 RefSeq:NP_001189472.1 RefSeq:NP_853530.2
ProteinModelPortal:P39880 SMR:P39880 IntAct:P39880 MINT:MINT-271237
STRING:P39880 PhosphoSite:P39880 DMDM:296439379 PRIDE:P39880
Ensembl:ENST00000292535 Ensembl:ENST00000360264
Ensembl:ENST00000425244 Ensembl:ENST00000546411
Ensembl:ENST00000549414 Ensembl:ENST00000550008
Ensembl:ENST00000556210 Ensembl:ENST00000562419
Ensembl:ENST00000565244 Ensembl:ENST00000566988
Ensembl:ENST00000568052 Ensembl:ENST00000568166
Ensembl:ENST00000569498 UCSC:uc003uys.4 UCSC:uc003uyx.4
HPA:HPA003277 neXtProt:NX_P39880 OMA:PPIETSK PMAP-CutDB:P39880
ArrayExpress:P39880 Bgee:P39880 Genevestigator:P39880
Uniprot:P39880
Length = 1505
Score = 158 (60.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 353 EEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKL-KSGRETFR 411
+E++T EL +++ +L + I Q IF ++VL SQG++SD+L PKPWSKL + GRE F
Sbjct: 941 QEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFI 1000
Query: 412 RMWKWL 417
RM WL
Sbjct: 1001 RMQLWL 1006
Score = 157 (60.3 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 35/86 (40%), Positives = 57/86 (66%)
Query: 345 SLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK 404
S G+ E EE++T E+A+++ +L +++I Q IF VL SQG++S++L PKPW+KL
Sbjct: 541 SAGSVSEGEEMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLT 600
Query: 405 -SGRETFRRMWKWLQEPEFQRMSALR 429
G+E F +M ++L + Q + ALR
Sbjct: 601 VRGKEPFHKMKQFLSDE--QNILALR 624
Score = 140 (54.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 354 EINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLK-SGRETFRR 412
E++T + +R+ L ++ Q +F + +L +QG++SDLL PKPW KL GRE F R
Sbjct: 1125 ELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVR 1184
Query: 413 MWKWLQEP 420
M WL +P
Sbjct: 1185 MQLWLNDP 1192
Score = 42 (19.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 211 QSTYS----QNGLNSPQKSLSPNSYDSPYNQRDLVDRSVLGGGSQSPTLSPNEGSL 262
QS YS + G S S P S +S +Q L + G + SP+ S + GS+
Sbjct: 490 QSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSV 545
Score = 39 (18.8 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 20/105 (19%), Positives = 37/105 (35%)
Query: 153 GHTGNVTGSFTVMQNNIGLGINSHYTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQS 212
G GN+T + I S K ++ + P S + +
Sbjct: 651 GSEGNITTRIRASETGSDEAIKSILEQAKRELQVQKTAEPAQPSSASGSGNSDDAIRSIL 710
Query: 213 TYSQNGLNSPQKSLSPNSYDSPYNQRDL-VDRSVLGGGSQSPTLS 256
++ + + Q +L P +P +Q D+ + L S PT+S
Sbjct: 711 QQARREMEAQQAALDPALKQAPLSQSDITILTPKLLSTSPMPTVS 755
Score = 38 (18.4 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 91 SVASIMDSSEFRNLHAEPTYQTLTNVNGRLXXXXXXXXXXXATLTPL--QPLPPISTMSD 148
SV S+ D + + +E T +T + + +LT L QP PPI D
Sbjct: 1028 SVTSLQDPLQQGCVSSESTPKTSASCSPA-PESPMSSSESVKSLTELVQQPCPPIEASKD 1086
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 5 EDGSLSEEIDNAAHARMSAISRSVVPALVPIPHDALDLG 43
E +LS+ A A ++ R + VP P ALDLG
Sbjct: 63 EIDALSKRSKEAEAAFLNVYKRLID---VPDPVPALDLG 98
>WB|WBGene00017538 [details] [associations]
symbol:ceh-49 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 HSSP:P50480
EMBL:FO081132 PIR:T31711 RefSeq:NP_504581.1
ProteinModelPortal:O16218 SMR:O16218 STRING:O16218
EnsemblMetazoa:F17A9.6 GeneID:179001 KEGG:cel:CELE_F17A9.6
UCSC:F17A9.6 CTD:179001 WormBase:F17A9.6 eggNOG:KOG2252
InParanoid:O16218 NextBio:903480 Uniprot:O16218
Length = 313
Score = 134 (52.2 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 35/95 (36%), Positives = 55/95 (57%)
Query: 346 LGNSGELEEIN--TKELAQRIS---AELKRY---SIP--QAIFAQRVLCRSQGTLSDLLR 395
L N ++EI+ K+L ++ +E KR+ S P Q FA+ +L R+QG+LS+LL
Sbjct: 141 LDNPTIIKEIDFDLKDLCDKMFVFFSENKRHIEISKPMNQTNFAEHILNRTQGSLSELLN 200
Query: 396 NPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRL 430
+PKPW + GR ++RM+ WL+ E R +L
Sbjct: 201 HPKPWDAVSMGRTVYQRMFNWLEMSEDDRAEIWKL 235
Score = 38 (18.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 201 ITQENSPLSPQSTYSQNGLNSPQKSLSPNSYDSP 234
+ Q +SP S+ S+ S Q++L+ D+P
Sbjct: 113 LKQRQEAVSPSSSNSEQSKYSKQEALA--MLDNP 144
>WB|WBGene00000464 [details] [associations]
symbol:ceh-44 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0030173 "integral to Golgi membrane" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 KO:K09313 EMBL:FO081806
GeneID:175372 KEGG:cel:CELE_Y54F10AM.4 UCSC:Y54F10AM.4c CTD:175372
GeneTree:ENSGT00530000063019 NextBio:887866 RefSeq:NP_497576.1
ProteinModelPortal:Q9BL02 SMR:Q9BL02 PRIDE:Q9BL02
EnsemblMetazoa:Y54F10AM.4a.1 EnsemblMetazoa:Y54F10AM.4a.2
WormBase:Y54F10AM.4a HOGENOM:HOG000019069 InParanoid:Q9BL02
ArrayExpress:Q9BL02 Uniprot:Q9BL02
Length = 1273
Score = 140 (54.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 355 INTKELAQRISAELKRYSIPQAIFAQRVL---CRSQGTLSDLLRNPKPWSKLKS-GRETF 410
+NT E+A + Y+I Q +FA+ V+ +SQG+LS+LL P+ W+KL GRE F
Sbjct: 600 LNTTEIASHCKRLMIAYNIGQRLFAKHVMNQVVKSQGSLSELLSKPRHWNKLTDKGREAF 659
Query: 411 RRMWKWLQEPE 421
RR++ W+ + E
Sbjct: 660 RRIYGWISDDE 670
>UNIPROTKB|Q3ZB87 [details] [associations]
symbol:SATB2 "DNA-binding protein SATB2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:1.10.260.40 SUPFAM:SSF47413
HOGENOM:HOG000004805 HOVERGEN:HBG054240 EMBL:AC016746 EMBL:AC017096
UniGene:Hs.516617 HGNC:HGNC:21637 ChiTaRS:SATB2 EMBL:BC103492
IPI:IPI00651702 SMR:Q3ZB87 STRING:Q3ZB87 Ensembl:ENST00000428695
UCSC:uc010fsq.2 Uniprot:Q3ZB87
Length = 615
Score = 121 (47.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 237 QRDLVDRSVLGGGSQSPTLSPNEGSLHSSPTT--LVTNFQGAATIPTMNGITTITP--HT 292
+ +L D VLG Q P PN L S T + Q + P N + + P
Sbjct: 121 RENLSDYCVLG---QRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSP 177
Query: 293 VVVSPQTSPQHSLISNQLQRS----DSPGPPKIISQQXXXXXXXXXXXXNAVVGAVSLGN 348
++SPQ SPQ L+ Q+ + ++++ Q + AV
Sbjct: 178 GLLSPQLSPQ--LVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEP 235
Query: 349 SGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPK-PWSKLKSGR 407
+ E++ ++ Q++ ELKR S+ QA+FA+ R+QG LS++LR + P + +S
Sbjct: 236 TNSSVEVSP-DIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLL 294
Query: 408 ETFRRMWKWLQEPEFQR 424
R M +L PE +R
Sbjct: 295 VNLRAMQNFLNLPEVER 311
Score = 54 (24.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 6 DGSLSEEIDNAA-HARMSAISRSVVPALVPIPHDALDLGSNHSSGKDDDNESIKTEGLT 63
DGSL E DN HA + + V+ + + + L LG +HSS E ++ E L+
Sbjct: 70 DGSL--EYDNREEHAEFVLVRKDVLFSQL-VETALLALGYSHSSAAQAQVERVERENLS 125
>UNIPROTKB|C9JR56 [details] [associations]
symbol:SATB2 "DNA-binding protein SATB2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:1.10.260.40 SUPFAM:SSF47413
HOGENOM:HOG000004805 EMBL:AC016746 EMBL:AC017096 HGNC:HGNC:21637
ChiTaRS:SATB2 IPI:IPI00926670 ProteinModelPortal:C9JR56 SMR:C9JR56
STRING:C9JR56 Ensembl:ENST00000443023 ArrayExpress:C9JR56
Bgee:C9JR56 Uniprot:C9JR56
Length = 674
Score = 121 (47.7 bits), Expect = 0.00042, P = 0.00042
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 237 QRDLVDRSVLGGGSQSPTLSPNEGSLHSSPTT--LVTNFQGAATIPTMNGITTITP--HT 292
+ +L D VLG Q P PN L S T + Q + P N + + P
Sbjct: 180 RENLSDYCVLG---QRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSP 236
Query: 293 VVVSPQTSPQHSLISNQLQRS----DSPGPPKIISQQXXXXXXXXXXXXNAVVGAVSLGN 348
++SPQ SPQ L+ Q+ + ++++ Q + AV
Sbjct: 237 GLLSPQLSPQ--LVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEP 294
Query: 349 SGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPK-PWSKLKSGR 407
+ E++ ++ Q++ ELKR S+ QA+FA+ R+QG LS++LR + P + +S
Sbjct: 295 TNSSVEVSP-DIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLL 353
Query: 408 ETFRRMWKWLQEPEFQR 424
R M +L PE +R
Sbjct: 354 VNLRAMQNFLNLPEVER 370
>UNIPROTKB|E1BZL3 [details] [associations]
symbol:SATB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0002076
"osteoblast development" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0009880 "embryonic pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0071310 "cellular response
to organic substance" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0006338 GO:GO:0000122 Gene3D:1.10.260.40
SUPFAM:SSF47413 GO:GO:0071310 GO:GO:0000118
GeneTree:ENSGT00390000008096 CTD:23314 OMA:PPAEDSC
EMBL:AADN02019848 EMBL:AADN02019849 EMBL:AADN02019850
IPI:IPI00594238 RefSeq:NP_001186039.1 UniGene:Gga.32259
Ensembl:ENSGALT00000013201 GeneID:424063 KEGG:gga:424063
NextBio:20826445 Uniprot:E1BZL3
Length = 731
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 50/174 (28%), Positives = 82/174 (47%)
Query: 256 SPNEGSLHSSPTTLVTNFQGAATIPTMNGITTITPHTVVVSPQTSPQHSLISNQLQRS-- 313
SP+ G +H S T + N +PTM T I P ++SPQ SPQ L+ Q+ +
Sbjct: 271 SPH-GQIHHS--TPIRN-----QVPTMQ--TMINPG--LLSPQLSPQ--LVRQQIAMAHL 316
Query: 314 --DSPGPPKIISQQXXXXXXXXXXXXNAVVGAVSLGNSGELEEINTKELAQRISAELKRY 371
++++ Q + AV S E++ ++ Q++ ELKR
Sbjct: 317 INQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPSNSSVEVSP-DIYQQVRDELKRA 375
Query: 372 SIPQAIFAQRVLCRSQGTLSDLLRNPK-PWSKLKSGRETFRRMWKWLQEPEFQR 424
S+ QA+FA+ R+QG LS++LR + P + +S R M +L P+ +R
Sbjct: 376 SVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFLNLPDSER 429
>UNIPROTKB|J9NRQ8 [details] [associations]
symbol:SATB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00390000008096
CTD:23314 EMBL:AAEX03017991 RefSeq:XP_003434297.1
Ensembl:ENSCAFT00000046713 GeneID:100687238 KEGG:cfa:100687238
Uniprot:J9NRQ8
Length = 733
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 237 QRDLVDRSVLGGGSQSPTLSPNEGSLHSSPTT--LVTNFQGAATIPTMNGITTITP--HT 292
+ +L D VLG Q P PN L S T + Q + P N + + P
Sbjct: 239 RENLSDYCVLG---QRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSP 295
Query: 293 VVVSPQTSPQHSLISNQLQRS----DSPGPPKIISQQXXXXXXXXXXXXNAVVGAVSLGN 348
++SPQ SPQ L+ Q+ + ++++ Q + AV
Sbjct: 296 GLLSPQLSPQ--LVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEP 353
Query: 349 SGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPK-PWSKLKSGR 407
+ E++ ++ Q++ ELKR S+ QA+FA+ R+QG LS++LR + P + +S
Sbjct: 354 TNSSVEVSP-DIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLL 412
Query: 408 ETFRRMWKWLQEPEFQR 424
R M +L PE +R
Sbjct: 413 VNLRAMQNFLNLPEVER 429
>UNIPROTKB|Q9UPW6 [details] [associations]
symbol:SATB2 "DNA-binding protein SATB2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0002076
"osteoblast development" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0071310 "cellular response to organic substance"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0005737 GO:GO:0001764 EMBL:CH471063 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0002076 GO:GO:0051216 GO:GO:0016363
GO:GO:0048704 GO:GO:0060021 GO:GO:0009880 Gene3D:1.10.260.40
SUPFAM:SSF47413 GO:GO:0071310 GO:GO:0000118 Orphanet:199306
eggNOG:NOG313826 HOVERGEN:HBG054240 EMBL:AB028957 EMBL:AK291463
EMBL:AC016746 EMBL:AC017096 EMBL:BC098136 EMBL:BC099723
EMBL:BC103500 IPI:IPI00010433 RefSeq:NP_001165980.1
RefSeq:NP_001165988.1 RefSeq:NP_056080.1 UniGene:Hs.516617 PDB:1WI3
PDB:1WIZ PDB:2CSF PDBsum:1WI3 PDBsum:1WIZ PDBsum:2CSF
ProteinModelPortal:Q9UPW6 SMR:Q9UPW6 STRING:Q9UPW6
PhosphoSite:Q9UPW6 DMDM:13634020 PaxDb:Q9UPW6 PRIDE:Q9UPW6
DNASU:23314 Ensembl:ENST00000260926 Ensembl:ENST00000417098
Ensembl:ENST00000457245 GeneID:23314 KEGG:hsa:23314 UCSC:uc002uuy.2
CTD:23314 GeneCards:GC02M200098 HGNC:HGNC:21637 HPA:CAB023669
HPA:HPA001042 HPA:HPA029543 MIM:119540 MIM:608148
neXtProt:NX_Q9UPW6 Orphanet:251019 Orphanet:251028
PharmGKB:PA128394624 InParanoid:Q9UPW6 OMA:PPAEDSC
OrthoDB:EOG4DBTD9 PhylomeDB:Q9UPW6 ChiTaRS:SATB2
EvolutionaryTrace:Q9UPW6 GenomeRNAi:23314 NextBio:45192
ArrayExpress:Q9UPW6 Bgee:Q9UPW6 CleanEx:HS_SATB2
Genevestigator:Q9UPW6 GermOnline:ENSG00000119042 Uniprot:Q9UPW6
Length = 733
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 237 QRDLVDRSVLGGGSQSPTLSPNEGSLHSSPTT--LVTNFQGAATIPTMNGITTITP--HT 292
+ +L D VLG Q P PN L S T + Q + P N + + P
Sbjct: 239 RENLSDYCVLG---QRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSP 295
Query: 293 VVVSPQTSPQHSLISNQLQRS----DSPGPPKIISQQXXXXXXXXXXXXNAVVGAVSLGN 348
++SPQ SPQ L+ Q+ + ++++ Q + AV
Sbjct: 296 GLLSPQLSPQ--LVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEP 353
Query: 349 SGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPK-PWSKLKSGR 407
+ E++ ++ Q++ ELKR S+ QA+FA+ R+QG LS++LR + P + +S
Sbjct: 354 TNSSVEVSP-DIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLL 412
Query: 408 ETFRRMWKWLQEPEFQR 424
R M +L PE +R
Sbjct: 413 VNLRAMQNFLNLPEVER 429
>MGI|MGI:2679336 [details] [associations]
symbol:Satb2 "special AT-rich sequence binding protein 2"
species:10090 "Mus musculus" [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=IC] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IGI;IMP] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IGI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] [GO:0060021 "palate
development" evidence=IMP] [GO:0071310 "cellular response to
organic substance" evidence=IDA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 MGI:MGI:2679336 GO:GO:0005737
GO:GO:0001764 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0006338 GO:GO:0000122 GO:GO:0000790
GO:GO:0002076 GO:GO:0051216 GO:GO:0016363 GO:GO:0048704
GO:GO:0060021 GO:GO:0009880 Gene3D:1.10.260.40 SUPFAM:SSF47413
GO:GO:0071310 GO:GO:0000118 eggNOG:NOG313826 HOGENOM:HOG000004805
HOVERGEN:HBG054240 GeneTree:ENSGT00390000008096 CTD:23314
OMA:PPAEDSC OrthoDB:EOG4DBTD9 EMBL:AF319623 EMBL:AK129270
IPI:IPI00128650 IPI:IPI00395054 RefSeq:NP_631885.1
UniGene:Mm.145599 ProteinModelPortal:Q8VI24 SMR:Q8VI24
IntAct:Q8VI24 STRING:Q8VI24 PhosphoSite:Q8VI24 PRIDE:Q8VI24
Ensembl:ENSMUST00000042857 Ensembl:ENSMUST00000114415 GeneID:212712
KEGG:mmu:212712 UCSC:uc011wlc.1 InParanoid:Q8VI24 NextBio:373676
Bgee:Q8VI24 CleanEx:MM_SATB2 Genevestigator:Q8VI24
GermOnline:ENSMUSG00000038331 Uniprot:Q8VI24
Length = 733
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 237 QRDLVDRSVLGGGSQSPTLSPNEGSLHSSPTT--LVTNFQGAATIPTMNGITTITP--HT 292
+ +L D VLG Q P PN L S T + Q + P N + + P
Sbjct: 239 RENLSDYCVLG---QRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSP 295
Query: 293 VVVSPQTSPQHSLISNQLQRS----DSPGPPKIISQQXXXXXXXXXXXXNAVVGAVSLGN 348
++SPQ SPQ L+ Q+ + ++++ Q + AV
Sbjct: 296 GLLSPQLSPQ--LVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEP 353
Query: 349 SGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPK-PWSKLKSGR 407
+ E++ ++ Q++ ELKR S+ QA+FA+ R+QG LS++LR + P + +S
Sbjct: 354 TNSSVEVSP-DIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLL 412
Query: 408 ETFRRMWKWLQEPEFQR 424
R M +L PE +R
Sbjct: 413 VNLRAMQNFLNLPEVER 429
>RGD|1562369 [details] [associations]
symbol:Satb2 "SATB homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000118 "histone deacetylase complex" evidence=IEA;ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0001764 "neuron
migration" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006338 "chromatin remodeling"
evidence=IEA;ISO] [GO:0009880 "embryonic pattern specification"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0060021
"palate development" evidence=IEA;ISO] [GO:0071310 "cellular
response to organic substance" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 RGD:1562369
GO:GO:0005737 GO:GO:0001764 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0006338 GO:GO:0000122 GO:GO:0002076
GO:GO:0051216 GO:GO:0048704 GO:GO:0060021 GO:GO:0009880
Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0071310 EMBL:CH473965
GO:GO:0000118 GeneTree:ENSGT00390000008096 CTD:23314 OMA:PPAEDSC
OrthoDB:EOG4DBTD9 IPI:IPI00568480 RefSeq:NP_001102776.1
UniGene:Rn.216103 Ensembl:ENSRNOT00000049259 GeneID:501145
KEGG:rno:501145 UCSC:RGD:1562369 NextBio:708423 Uniprot:D3ZJ19
Length = 733
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 237 QRDLVDRSVLGGGSQSPTLSPNEGSLHSSPTT--LVTNFQGAATIPTMNGITTITP--HT 292
+ +L D VLG Q P PN L S T + Q + P N + + P
Sbjct: 239 RENLSDYCVLG---QRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSP 295
Query: 293 VVVSPQTSPQHSLISNQLQRS----DSPGPPKIISQQXXXXXXXXXXXXNAVVGAVSLGN 348
++SPQ SPQ L+ Q+ + ++++ Q + AV
Sbjct: 296 GLLSPQLSPQ--LVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEP 353
Query: 349 SGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPK-PWSKLKSGR 407
+ E++ ++ Q++ ELKR S+ QA+FA+ R+QG LS++LR + P + +S
Sbjct: 354 TNSSVEVSP-DIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLL 412
Query: 408 ETFRRMWKWLQEPEFQR 424
R M +L PE +R
Sbjct: 413 VNLRAMQNFLNLPEVER 429
>UNIPROTKB|F1Q2V6 [details] [associations]
symbol:SATB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00390000008096
OMA:PPAEDSC EMBL:AAEX03017991 Ensembl:ENSCAFT00000017482
Uniprot:F1Q2V6
Length = 763
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 237 QRDLVDRSVLGGGSQSPTLSPNEGSLHSSPTT--LVTNFQGAATIPTMNGITTITP--HT 292
+ +L D VLG Q P PN L S T + Q + P N + + P
Sbjct: 269 RENLSDYCVLG---QRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSP 325
Query: 293 VVVSPQTSPQHSLISNQLQRS----DSPGPPKIISQQXXXXXXXXXXXXNAVVGAVSLGN 348
++SPQ SPQ L+ Q+ + ++++ Q + AV
Sbjct: 326 GLLSPQLSPQ--LVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEP 383
Query: 349 SGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPK-PWSKLKSGR 407
+ E++ ++ Q++ ELKR S+ QA+FA+ R+QG LS++LR + P + +S
Sbjct: 384 TNSSVEVSP-DIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLL 442
Query: 408 ETFRRMWKWLQEPEFQR 424
R M +L PE +R
Sbjct: 443 VNLRAMQNFLNLPEVER 459
>UNIPROTKB|F1N426 [details] [associations]
symbol:SATB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071310 "cellular response to organic substance"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0005737 GO:GO:0001764 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0006338 GO:GO:0000122
GO:GO:0002076 GO:GO:0051216 GO:GO:0048704 GO:GO:0060021
GO:GO:0009880 Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0071310
GO:GO:0000118 GeneTree:ENSGT00390000008096 OMA:PPAEDSC
EMBL:DAAA02005537 EMBL:DAAA02005538 EMBL:DAAA02005539
EMBL:DAAA02005540 EMBL:DAAA02005541 EMBL:DAAA02005542
EMBL:DAAA02005543 EMBL:DAAA02005544 EMBL:DAAA02005545
EMBL:DAAA02005546 EMBL:DAAA02005547 EMBL:DAAA02005548
EMBL:DAAA02005549 EMBL:DAAA02005550 EMBL:DAAA02005551
EMBL:DAAA02005552 EMBL:DAAA02005553 EMBL:DAAA02005554
EMBL:DAAA02005555 IPI:IPI00703652 Ensembl:ENSBTAT00000021729
Uniprot:F1N426
Length = 765
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 237 QRDLVDRSVLGGGSQSPTLSPNEGSLHSSPTT--LVTNFQGAATIPTMNGITTITP--HT 292
+ +L D VLG Q P PN L S T + Q + P N + + P
Sbjct: 271 RENLSDYCVLG---QRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSP 327
Query: 293 VVVSPQTSPQHSLISNQLQRS----DSPGPPKIISQQXXXXXXXXXXXXNAVVGAVSLGN 348
++SPQ SPQ L+ Q+ + ++++ Q + AV
Sbjct: 328 GLLSPQLSPQ--LVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEP 385
Query: 349 SGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPK-PWSKLKSGR 407
+ E++ ++ Q++ ELKR S+ QA+FA+ R+QG LS++LR + P + +S
Sbjct: 386 TNSSVEVSP-DIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLL 444
Query: 408 ETFRRMWKWLQEPEFQR 424
R M +L PE +R
Sbjct: 445 VNLRAMQNFLNLPEVER 461
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.126 0.357 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 433 410 0.00079 118 3 11 23 0.50 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 62
No. of states in DFA: 603 (64 KB)
Total size of DFA: 233 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 43.28u 0.08s 43.36t Elapsed: 00:00:33
Total cpu time: 43.29u 0.08s 43.37t Elapsed: 00:00:40
Start: Thu Aug 15 14:39:19 2013 End: Thu Aug 15 14:39:59 2013