Your job contains 1 sequence.
>psy3396
EQLAELEAAFAKSHYPDIYCREELAILFQVWFQNRRAKYRKQEKQLQKALTPSVIPTCNG
AMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSSHHSNLA
TPMLQYQT
The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3396
(128 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0052532 - symbol:CG32532 species:7227 "Drosophila ... 351 2.2e-46 2
WB|WBGene00006778 - symbol:unc-42 species:6239 "Caenorhab... 204 1.8e-16 1
UNIPROTKB|Q9PVY0 - symbol:RX1 "Retinal homeobox protein R... 157 4.5e-15 2
UNIPROTKB|F1NH36 - symbol:Gga.55791 "Uncharacterized prot... 157 9.6e-15 2
ZFIN|ZDB-GENE-990415-237 - symbol:rx2 "retinal homeobox g... 157 2.4e-14 2
UNIPROTKB|Q5XKR4 - symbol:OTP "Homeobox protein orthopedi... 151 8.9e-14 2
UNIPROTKB|F2Z5H5 - symbol:OTP "Uncharacterized protein" s... 151 8.9e-14 2
MGI|MGI:99835 - symbol:Otp "orthopedia homolog (Drosophil... 151 8.9e-14 2
UNIPROTKB|G3V7E0 - symbol:Otp "Protein Otp" species:10116... 151 8.9e-14 2
ZFIN|ZDB-GENE-990415-238 - symbol:rx3 "retinal homeobox g... 157 3.4e-13 2
ZFIN|ZDB-GENE-070216-1 - symbol:otpa "orthopedia homolog ... 155 4.8e-13 2
UNIPROTKB|Q9PVX0 - symbol:RX2 "Retinal homeobox protein R... 157 5.8e-13 2
MGI|MGI:109632 - symbol:Rax "retina and anterior neural f... 157 6.9e-13 2
RGD|620371 - symbol:Rax "retina and anterior neural fold ... 157 6.9e-13 2
UNIPROTKB|Q9JLT7 - symbol:Rax "Retinal homeobox protein R... 157 6.9e-13 2
UNIPROTKB|Q9Y2V3 - symbol:RAX "Retinal homeobox protein R... 157 7.4e-13 2
UNIPROTKB|F1SMS6 - symbol:RAX "Uncharacterized protein" s... 157 7.5e-13 2
UNIPROTKB|E1BHB8 - symbol:LOC615339 "Uncharacterized prot... 157 7.9e-13 2
ZFIN|ZDB-GENE-990415-236 - symbol:rx1 "retinal homeobox g... 157 9.2e-13 2
UNIPROTKB|F1P961 - symbol:ALX1 "Uncharacterized protein" ... 149 9.3e-13 2
UNIPROTKB|E1C121 - symbol:PITX1 "Pituitary homeobox 1" sp... 142 1.0e-12 2
UNIPROTKB|F1P452 - symbol:PITX1 "Pituitary homeobox 1" sp... 142 1.2e-12 2
ZFIN|ZDB-GENE-990708-7 - symbol:otpb "orthopedia homolog ... 151 1.3e-12 2
ZFIN|ZDB-GENE-050208-140 - symbol:alx4b "aristaless-like ... 149 1.4e-12 2
UNIPROTKB|O93582 - symbol:Alx-4 "Paired type homeodomain ... 148 2.3e-12 2
ZFIN|ZDB-GENE-990415-15 - symbol:arxa "aristaless related... 157 2.3e-12 2
UNIPROTKB|P56673 - symbol:PITX1 "Pituitary homeobox 1" sp... 144 2.9e-12 2
MGI|MGI:108359 - symbol:Alx4 "aristaless-like homeobox 4"... 148 3.3e-12 2
FB|FBgn0000061 - symbol:al "aristaless" species:7227 "Dro... 152 4.3e-12 2
UNIPROTKB|F1N3B5 - symbol:VSX2 "Uncharacterized protein" ... 145 4.6e-12 2
UNIPROTKB|E2RTB3 - symbol:VSX2 "Uncharacterized protein" ... 145 4.6e-12 2
ZFIN|ZDB-GENE-070712-3 - symbol:alx4a "aristaless-like ho... 149 4.7e-12 2
UNIPROTKB|F1NC94 - symbol:ALX1 "Uncharacterized protein" ... 149 4.8e-12 2
UNIPROTKB|E1BKK2 - symbol:ALX1 "Uncharacterized protein" ... 149 5.5e-12 2
UNIPROTKB|Q15699 - symbol:ALX1 "ALX homeobox protein 1" s... 149 5.5e-12 2
UNIPROTKB|F1SPX2 - symbol:ALX1 "Uncharacterized protein" ... 149 5.5e-12 2
MGI|MGI:104621 - symbol:Alx1 "ALX homeobox 1" species:100... 149 5.5e-12 2
RGD|2273 - symbol:Alx1 "ALX homeobox 1" species:10116 "Ra... 149 5.5e-12 2
UNIPROTKB|F1S3F6 - symbol:VSX2 "Uncharacterized protein" ... 145 5.6e-12 2
ZFIN|ZDB-GENE-050419-191 - symbol:alx1 "ALX homeobox 1" s... 148 6.5e-12 2
ZFIN|ZDB-GENE-041229-4 - symbol:pitx3 "paired-like homeod... 127 6.5e-12 2
UNIPROTKB|Q4LAL6 - symbol:ALX4 "Homeobox protein aristale... 148 6.6e-12 2
UNIPROTKB|Q9H161 - symbol:ALX4 "Homeobox protein aristale... 148 7.5e-12 2
UNIPROTKB|E2RLA0 - symbol:ALX4 "Uncharacterized protein" ... 148 7.7e-12 2
UNIPROTKB|E1BYW7 - symbol:DRGX "Uncharacterized protein" ... 142 8.7e-12 2
UNIPROTKB|E1BDA0 - symbol:DRGX "Uncharacterized protein" ... 142 9.5e-12 2
UNIPROTKB|F1SDX7 - symbol:DRGX "Uncharacterized protein" ... 142 9.5e-12 2
MGI|MGI:2148204 - symbol:Prrxl1 "paired related homeobox ... 142 9.5e-12 2
RGD|628616 - symbol:Prrxl1 "paired related homeobox prote... 142 9.5e-12 2
UNIPROTKB|Q62798 - symbol:Drgx "Dorsal root ganglia homeo... 142 9.5e-12 2
UNIPROTKB|E2QSM2 - symbol:DRGX "Uncharacterized protein" ... 142 9.8e-12 2
UNIPROTKB|E1C143 - symbol:PITX3 "Uncharacterized protein"... 129 1.0e-11 2
ZFIN|ZDB-GENE-070330-1 - symbol:drgx "dorsal root ganglia... 143 1.3e-11 2
ZFIN|ZDB-GENE-990714-27 - symbol:pitx2 "paired-like homeo... 138 1.5e-11 2
MGI|MGI:88401 - symbol:Vsx2 "visual system homeobox 2" sp... 145 1.5e-11 2
UNIPROTKB|O75364 - symbol:PITX3 "Pituitary homeobox 3" sp... 136 1.6e-11 2
UNIPROTKB|Q9IAL1 - symbol:VSX2 "Visual system homeobox 2"... 145 1.8e-11 2
UNIPROTKB|G3V7K0 - symbol:Vsx2 "Ceh-10 homeo domain conta... 145 1.9e-11 2
UNIPROTKB|Q99697 - symbol:PITX2 "Pituitary homeobox 2" sp... 137 2.0e-11 2
MGI|MGI:109340 - symbol:Pitx2 "paired-like homeodomain tr... 137 2.0e-11 2
UNIPROTKB|F1S8T0 - symbol:PITX3 "Uncharacterized protein"... 135 2.0e-11 2
UNIPROTKB|E1BBR5 - symbol:PITX3 "Uncharacterized protein"... 135 2.1e-11 2
MGI|MGI:1100498 - symbol:Pitx3 "paired-like homeodomain t... 135 2.1e-11 2
RGD|3331 - symbol:Pitx2 "paired-like homeodomain 2" speci... 137 2.2e-11 2
UNIPROTKB|A5D7J4 - symbol:PITX2 "Uncharacterized protein"... 137 2.3e-11 2
UNIPROTKB|E2R5R2 - symbol:PITX2 "Uncharacterized protein"... 137 2.3e-11 2
UNIPROTKB|F1S139 - symbol:PITX2 "Uncharacterized protein"... 137 2.3e-11 2
UNIPROTKB|O93385 - symbol:PITX2 "Pituitary homeobox 2" sp... 137 2.5e-11 2
ZFIN|ZDB-GENE-001222-1 - symbol:vsx2 "visual system homeo... 145 2.7e-11 2
WB|WBGene00000440 - symbol:ceh-17 species:6239 "Caenorhab... 155 2.8e-11 1
UNIPROTKB|G5EC89 - symbol:ceh-17 "CEH-17" species:6239 "C... 155 2.8e-11 1
UNIPROTKB|J9P9T1 - symbol:PITX3 "Uncharacterized protein"... 133 3.5e-11 2
UNIPROTKB|H0YAD2 - symbol:PHOX2B "Paired mesoderm homeobo... 154 3.5e-11 1
UNIPROTKB|P58304 - symbol:VSX2 "Visual system homeobox 2"... 145 4.0e-11 2
UNIPROTKB|I3LRI8 - symbol:I3LRI8 "Uncharacterized protein... 149 4.4e-11 2
RGD|69253 - symbol:Pitx1 "paired-like homeodomain 1" spec... 131 4.5e-11 2
RGD|3332 - symbol:Pitx3 "paired-like homeodomain 3" speci... 132 4.6e-11 2
FB|FBgn0020617 - symbol:Rx "Retinal Homeobox" species:722... 165 4.7e-11 1
ZFIN|ZDB-GENE-060421-3623 - symbol:pitx1 "paired-like hom... 155 6.2e-11 1
MGI|MGI:106633 - symbol:Phox2a "paired-like homeobox 2a" ... 154 7.5e-11 1
ZFIN|ZDB-GENE-000223-14 - symbol:phox2a "paired-like home... 154 7.5e-11 1
WB|WBGene00044330 - symbol:alr-1 species:6239 "Caenorhabd... 157 7.6e-11 1
RGD|621323 - symbol:Phox2a "paired-like homeobox 2a" spec... 154 7.6e-11 1
UNIPROTKB|G3V8L2 - symbol:Phox2a "Paired-like homeobox 2a... 154 7.6e-11 1
UNIPROTKB|E2R2D3 - symbol:PHOX2A "Uncharacterized protein... 154 8.0e-11 1
UNIPROTKB|O14813 - symbol:PHOX2A "Paired mesoderm homeobo... 154 8.0e-11 1
UNIPROTKB|F1MIH1 - symbol:PHOX2A "Uncharacterized protein... 154 8.1e-11 1
UNIPROTKB|F1SUV6 - symbol:PHOX2A "Uncharacterized protein... 154 8.3e-11 1
UNIPROTKB|Q96QS3 - symbol:ARX "Homeobox protein ARX" spec... 149 9.0e-11 2
MGI|MGI:1097716 - symbol:Arx "aristaless related homeobox... 149 9.1e-11 2
RGD|1562672 - symbol:Arx "aristaless related homeobox" sp... 149 9.2e-11 2
UNIPROTKB|D4A5S8 - symbol:Arx "Homeobox protein ARX" spec... 149 9.2e-11 2
UNIPROTKB|F1LQW2 - symbol:Arx "Homeobox protein ARX" spec... 149 9.2e-11 2
WB|WBGene00000433 - symbol:ceh-8 species:6239 "Caenorhabd... 153 9.2e-11 1
UNIPROTKB|E2RMY1 - symbol:PHOX2B "Uncharacterized protein... 154 1.1e-10 1
UNIPROTKB|Q99453 - symbol:PHOX2B "Paired mesoderm homeobo... 154 1.1e-10 1
MGI|MGI:1100882 - symbol:Phox2b "paired-like homeobox 2b"... 154 1.1e-10 1
UNIPROTKB|F2Z3R9 - symbol:Phox2b "Protein Phox2b" species... 154 1.1e-10 1
UNIPROTKB|E1BME7 - symbol:PHOX2B "Uncharacterized protein... 154 1.1e-10 1
UNIPROTKB|F1NMR5 - symbol:F1NMR5 "Uncharacterized protein... 149 1.2e-10 1
WARNING: Descriptions of 331 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0052532 [details] [associations]
symbol:CG32532 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:AE014298
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:P06601 GeneTree:ENSGT00700000104273 eggNOG:NOG293463
RefSeq:NP_608318.4 UniGene:Dm.23173 ProteinModelPortal:Q9VWH1
SMR:Q9VWH1 EnsemblMetazoa:FBtr0074778 GeneID:32943
KEGG:dme:Dmel_CG32532 UCSC:CG32532-RA FlyBase:FBgn0052532
InParanoid:Q9VWH1 OMA:MSPEDEW OrthoDB:EOG43FFC7 PhylomeDB:Q9VWH1
GenomeRNAi:32943 NextBio:781170 ArrayExpress:Q9VWH1 Bgee:Q9VWH1
Uniprot:Q9VWH1
Length = 736
Score = 351 (128.6 bits), Expect = 2.2e-46, Sum P(2) = 2.2e-46
Identities = 73/93 (78%), Positives = 76/93 (81%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQLAELEAAFAKSHYPDIYCREELA QVWFQNRRAKYRKQEKQLQKAL PS
Sbjct: 520 EQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQLQKALAPS 579
Query: 54 VIPTCNGAMMRNIYP-TTSRGYQPYPHPNTINR 85
VIP+CNG MMRNI + SRGYQPYPH NT+NR
Sbjct: 580 VIPSCNG-MMRNIQGYSVSRGYQPYPHHNTMNR 611
Score = 169 (64.5 bits), Expect = 2.2e-46, Sum P(2) = 2.2e-46
Identities = 32/37 (86%), Positives = 33/37 (89%)
Query: 92 VPGMSTEDEWYNKSLSALRMNSSHHSNLATPMLQYQT 128
V GMS EDEWYNKSLSALRMNSSHH NL+ PMLQYQT
Sbjct: 700 VHGMSPEDEWYNKSLSALRMNSSHHPNLSAPMLQYQT 736
>WB|WBGene00006778 [details] [associations]
symbol:unc-42 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0040011 "locomotion" evidence=IMP] [GO:0030163 "protein
catabolic process" evidence=IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030163
GO:GO:0048665 GeneTree:ENSGT00700000104273 EMBL:Z70754 EMBL:Z70780
PIR:T22296 RefSeq:NP_505519.3 ProteinModelPortal:G5EBS8 SMR:G5EBS8
IntAct:G5EBS8 EnsemblMetazoa:F58E6.10 GeneID:192081
KEGG:cel:CELE_F58E6.10 CTD:192081 WormBase:F58E6.10 OMA:AAFQKSH
NextBio:951506 Uniprot:G5EBS8
Length = 264
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 50/94 (53%), Positives = 58/94 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTP- 52
EQL EL+AAF KSHYPDIY REELA + QVWFQNRRAK+RK EKQL KA+ P
Sbjct: 95 EQLQELDAAFQKSHYPDIYVREELARITKLNEARIQVWFQNRRAKHRKHEKQLNKAINPP 154
Query: 53 -SVIPT-CNGAMMRNIYPTT-SRG---YQPYPHP 80
S + N M + +YP +R YQ Y P
Sbjct: 155 HSFLSNPANTLMRQGMYPAALNRDGFWYQSYQRP 188
>UNIPROTKB|Q9PVY0 [details] [associations]
symbol:RX1 "Retinal homeobox protein Rx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 eggNOG:NOG261733 GeneTree:ENSGT00700000104256
HOVERGEN:HBG021349 OrthoDB:EOG4V4387 EMBL:AB015750 EMBL:AF420601
IPI:IPI00599352 RefSeq:NP_989435.2 UniGene:Gga.48437
UniGene:Gga.55791 ProteinModelPortal:Q9PVY0 SMR:Q9PVY0 PRIDE:Q9PVY0
Ensembl:ENSGALT00000032299 GeneID:373893 KEGG:gga:373893 CTD:30062
InParanoid:Q9PVY0 KO:K09332 NextBio:20813425 ArrayExpress:Q9PVY0
Uniprot:Q9PVY0
Length = 228
Score = 157 (60.3 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL ELE AF KSHYPD+Y REELA + QVWFQNRRAK+R+QEK
Sbjct: 47 QLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEK 96
Score = 47 (21.6 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 56 PTCNGAMMRNIYPTTSRGYQPY-PHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSS 114
P G N P ++G QP P P FV P + D+ + S+++LRM +
Sbjct: 159 PPYGGHSFLNTPPGMAQGMQPMAPAPYQCGTP-FVDKYP-LEDVDQ-RSSSIASLRMKAK 215
Query: 115 HH 116
H
Sbjct: 216 EH 217
>UNIPROTKB|F1NH36 [details] [associations]
symbol:Gga.55791 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104256 EMBL:AADN02057236 EMBL:AADN02063546
IPI:IPI00822313 Ensembl:ENSGALT00000021906 OMA:MVDDSCL
ArrayExpress:F1NH36 Uniprot:F1NH36
Length = 262
Score = 157 (60.3 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL ELE AF KSHYPD+Y REELA + QVWFQNRRAK+R+QEK
Sbjct: 81 QLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEK 130
Score = 47 (21.6 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 56 PTCNGAMMRNIYPTTSRGYQPY-PHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSS 114
P G N P ++G QP P P FV P + D+ + S+++LRM +
Sbjct: 193 PPYGGHSFLNTPPGMAQGMQPMAPAPYQCGTP-FVDKYP-LEDVDQ-RSSSIASLRMKAK 249
Query: 115 HH 116
H
Sbjct: 250 EH 251
>ZFIN|ZDB-GENE-990415-237 [details] [associations]
symbol:rx2 "retinal homeobox gene 2" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0060219 "camera-type eye photoreceptor cell differentiation"
evidence=IGI] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-237 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 eggNOG:NOG261733 GO:GO:0060219 HOVERGEN:HBG021349
OrthoDB:EOG4V4387 KO:K09332 EMBL:AF001908 IPI:IPI00483924
RefSeq:NP_571301.1 UniGene:Dr.75762 ProteinModelPortal:O42357
SMR:O42357 STRING:O42357 GeneID:30473 KEGG:dre:30473 CTD:30473
InParanoid:O42357 NextBio:20806866 ArrayExpress:O42357
Uniprot:O42357
Length = 327
Score = 157 (60.3 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL ELE AF KSHYPD+Y REELA + QVWFQNRRAK+R+QEK
Sbjct: 146 QLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEK 195
Score = 50 (22.7 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 24/75 (32%), Positives = 33/75 (44%)
Query: 44 KQLQKALT--PSVIPTCNGAMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEW 101
+ LQ T P + T G MM+NI P YQ P N ++ P ED
Sbjct: 254 QSLQPTYTAHPGFLNTSPG-MMQNIQPMPPPPYQCQP---VFNDKY-----P---LEDVD 301
Query: 102 YNKSLSALRMNSSHH 116
+ S++ALRM + H
Sbjct: 302 RSSSIAALRMKAKEH 316
>UNIPROTKB|Q5XKR4 [details] [associations]
symbol:OTP "Homeobox protein orthopedia" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021979 "hypothalamus cell
differentiation" evidence=IEA] [GO:0021985 "neurohypophysis
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0021879
GO:GO:0002052 HSSP:P06601 eggNOG:NOG256838 HOVERGEN:HBG001617
OrthoDB:EOG4FXR8D CTD:23440 EMBL:BC001800 IPI:IPI00029796
RefSeq:NP_115485.1 UniGene:Hs.202247 ProteinModelPortal:Q5XKR4
SMR:Q5XKR4 STRING:Q5XKR4 DMDM:74762283 PRIDE:Q5XKR4 DNASU:23440
Ensembl:ENST00000306422 GeneID:23440 KEGG:hsa:23440 UCSC:uc003kfg.3
GeneCards:GC05M076960 HGNC:HGNC:8518 HPA:HPA039365 MIM:604529
neXtProt:NX_Q5XKR4 PharmGKB:PA32844 HOGENOM:HOG000039976
InParanoid:Q5XKR4 OMA:RWATAGM PhylomeDB:Q5XKR4 GenomeRNAi:23440
NextBio:45713 Bgee:Q5XKR4 CleanEx:HS_OTP Genevestigator:Q5XKR4
GO:GO:0021979 GO:GO:0021985 Uniprot:Q5XKR4
Length = 325
Score = 151 (58.2 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTP-S 53
QL ELE +FAK+HYPDI+ REELA+ QVWFQNRRAK++K++K P +
Sbjct: 115 QLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGT 174
Query: 54 VIPT 57
++PT
Sbjct: 175 LLPT 178
Score = 51 (23.0 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 15/60 (25%), Positives = 24/60 (40%)
Query: 59 NGA-MMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSSHHS 117
NGA + ++Y G P P N L + D W S+++LR + H+
Sbjct: 260 NGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDSSDVWRGTSIASLRRKALEHT 319
>UNIPROTKB|F2Z5H5 [details] [associations]
symbol:OTP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0021985
"neurohypophysis development" evidence=IEA] [GO:0021979
"hypothalamus cell differentiation" evidence=IEA] [GO:0021879
"forebrain neuron differentiation" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0000976
GO:GO:0021879 GO:GO:0002052 OMA:RWATAGM GO:GO:0021979 GO:GO:0021985
EMBL:CU856635 RefSeq:XP_003123766.1 ProteinModelPortal:F2Z5H5
SMR:F2Z5H5 Ensembl:ENSSSCT00000015401 GeneID:100520724
KEGG:ssc:100520724 Uniprot:F2Z5H5
Length = 325
Score = 151 (58.2 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTP-S 53
QL ELE +FAK+HYPDI+ REELA+ QVWFQNRRAK++K++K P +
Sbjct: 115 QLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGT 174
Query: 54 VIPT 57
++PT
Sbjct: 175 LLPT 178
Score = 51 (23.0 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 15/60 (25%), Positives = 24/60 (40%)
Query: 59 NGA-MMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSSHHS 117
NGA + ++Y G P P N L + D W S+++LR + H+
Sbjct: 260 NGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDSSDVWRGTSIASLRRKALEHT 319
>MGI|MGI:99835 [details] [associations]
symbol:Otp "orthopedia homolog (Drosophila)" species:10090
"Mus musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0021879 "forebrain neuron differentiation"
evidence=IMP] [GO:0021979 "hypothalamus cell differentiation"
evidence=IMP] [GO:0021985 "neurohypophysis development"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:99835 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0000976 GO:GO:0021879
GO:GO:0002052 eggNOG:NOG256838 HOVERGEN:HBG001617 OrthoDB:EOG4FXR8D
CTD:23440 HOGENOM:HOG000039976 OMA:RWATAGM GO:GO:0021979
GO:GO:0021985 EMBL:Y10413 IPI:IPI00114250 RefSeq:NP_035151.1
UniGene:Mm.42051 ProteinModelPortal:O09113 SMR:O09113 STRING:O09113
PRIDE:O09113 DNASU:18420 Ensembl:ENSMUST00000022195 GeneID:18420
KEGG:mmu:18420 UCSC:uc007rly.1 InParanoid:O09113 NextBio:294068
Bgee:O09113 CleanEx:MM_OTP Genevestigator:O09113
GermOnline:ENSMUSG00000021685 Uniprot:O09113
Length = 325
Score = 151 (58.2 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTP-S 53
QL ELE +FAK+HYPDI+ REELA+ QVWFQNRRAK++K++K P +
Sbjct: 115 QLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGT 174
Query: 54 VIPT 57
++PT
Sbjct: 175 LLPT 178
Score = 51 (23.0 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 15/60 (25%), Positives = 24/60 (40%)
Query: 59 NGA-MMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSSHHS 117
NGA + ++Y G P P N L + D W S+++LR + H+
Sbjct: 260 NGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDSSDVWRGTSIASLRRKALEHT 319
>UNIPROTKB|G3V7E0 [details] [associations]
symbol:Otp "Protein Otp" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021879
"forebrain neuron differentiation" evidence=IEA] [GO:0021979
"hypothalamus cell differentiation" evidence=IEA] [GO:0021985
"neurohypophysis development" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:727945 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0000976
EMBL:CH473955 CTD:23440 OMA:RWATAGM RefSeq:NP_001093993.1
UniGene:Rn.7202 ProteinModelPortal:G3V7E0 SMR:G3V7E0 PRIDE:G3V7E0
Ensembl:ENSRNOT00000014036 GeneID:294640 KEGG:rno:294640
NextBio:638354 Uniprot:G3V7E0
Length = 325
Score = 151 (58.2 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTP-S 53
QL ELE +FAK+HYPDI+ REELA+ QVWFQNRRAK++K++K P +
Sbjct: 115 QLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGT 174
Query: 54 VIPT 57
++PT
Sbjct: 175 LLPT 178
Score = 51 (23.0 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 15/60 (25%), Positives = 24/60 (40%)
Query: 59 NGA-MMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSSHHS 117
NGA + ++Y G P P N L + D W S+++LR + H+
Sbjct: 260 NGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDSSDVWRGTSIASLRRKALEHT 319
>ZFIN|ZDB-GENE-990415-238 [details] [associations]
symbol:rx3 "retinal homeobox gene 3" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0030900
"forebrain development" evidence=IMP] [GO:0001654 "eye development"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0048593 "camera-type eye morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-238 GO:GO:0005634 GO:GO:0001708 GO:GO:0001755
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0021984 eggNOG:NOG261733
GO:GO:0048596 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 KO:K09332
EMBL:AF001909 IPI:IPI00493738 RefSeq:NP_571302.1 UniGene:Dr.540
ProteinModelPortal:O42358 SMR:O42358 STRING:O42358 GeneID:30474
KEGG:dre:30474 CTD:30474 InParanoid:O42358 NextBio:20806867
ArrayExpress:O42358 Uniprot:O42358
Length = 292
Score = 157 (60.3 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL ELE AF KSHYPD+Y REELA + QVWFQNRRAK+R+QEK
Sbjct: 117 QLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRRQEK 166
Score = 36 (17.7 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 103 NKSLSALRMNSSHH 116
N S+++LRM + H
Sbjct: 271 NTSIASLRMKAKEH 284
>ZFIN|ZDB-GENE-070216-1 [details] [associations]
symbol:otpa "orthopedia homolog a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0021884 "forebrain neuron development"
evidence=IGI;IMP] [GO:0007632 "visual behavior" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-070216-1 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
GO:GO:0000976 GO:GO:0021884 eggNOG:NOG256838 HOVERGEN:HBG001617
OrthoDB:EOG4FXR8D HOGENOM:HOG000039976 OMA:RWATAGM EMBL:CU459136
EMBL:BC162329 EMBL:BC162331 IPI:IPI00484790 RefSeq:NP_001122175.1
UniGene:Dr.87162 STRING:B3DGA5 Ensembl:ENSDART00000027268
GeneID:560759 KEGG:dre:560759 CTD:560759 NextBio:20883602
Uniprot:B3DGA5
Length = 332
Score = 155 (59.6 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTP-S 53
QL ELE +FAK+HYPDI+ REELA+ QVWFQNRRAK++K++K P +
Sbjct: 125 QLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGT 184
Query: 54 VIPTCNG 60
++PT +G
Sbjct: 185 LLPTHHG 191
Score = 40 (19.1 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 15/60 (25%), Positives = 24/60 (40%)
Query: 59 NGA-MMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSSHHS 117
NG+ + ++Y T G P N L T D W S+++LR + H+
Sbjct: 268 NGSGLQSHLYQPTFPGMVPASLSGPTNVTGSPQLCSSPDT-DVWRGTSIASLRRKALEHT 326
>UNIPROTKB|Q9PVX0 [details] [associations]
symbol:RX2 "Retinal homeobox protein Rx2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 HOVERGEN:HBG021349
EMBL:AB020318 IPI:IPI00590568 UniGene:Gga.27
ProteinModelPortal:Q9PVX0 SMR:Q9PVX0 Uniprot:Q9PVX0
Length = 317
Score = 157 (60.3 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL ELE AF KSHYPD+Y REELA + QVWFQNRRAK+R+QEK
Sbjct: 133 QLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEK 182
Score = 36 (17.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 103 NKSLSALRMNSSHH 116
N S+++LRM + H
Sbjct: 293 NTSIASLRMKAKEH 306
>MGI|MGI:109632 [details] [associations]
symbol:Rax "retina and anterior neural fold homeobox"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0021854 "hypothalamus development" evidence=IMP]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:109632 GO:GO:0005634 EMBL:CH466528
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 eggNOG:NOG261733 GO:GO:0021854
GeneTree:ENSGT00700000104256 CleanEx:MM_RAX HOVERGEN:HBG021349
OrthoDB:EOG4V4387 CTD:30062 KO:K09332 OMA:CGPGFGD ChiTaRS:RAX
EMBL:AF001906 EMBL:U73177 EMBL:BC024731 EMBL:BC058757
IPI:IPI00132598 RefSeq:NP_038861.2 UniGene:Mm.489746
ProteinModelPortal:O35602 SMR:O35602 STRING:O35602
PhosphoSite:O35602 PRIDE:O35602 Ensembl:ENSMUST00000025396
GeneID:19434 KEGG:mmu:19434 InParanoid:Q6GT92 NextBio:296571
Bgee:O35602 Genevestigator:O35602 GermOnline:ENSMUSG00000024518
Uniprot:O35602
Length = 342
Score = 157 (60.3 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL ELE AF KSHYPD+Y REELA + QVWFQNRRAK+R+QEK
Sbjct: 147 QLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEK 196
Score = 37 (18.1 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 103 NKSLSALRMNSSHH 116
N S++ALR+ + H
Sbjct: 318 NSSIAALRLKAKEH 331
>RGD|620371 [details] [associations]
symbol:Rax "retina and anterior neural fold homeobox"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0021854 "hypothalamus development" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
development" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
Length = 342
Score = 157 (60.3 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL ELE AF KSHYPD+Y REELA + QVWFQNRRAK+R+QEK
Sbjct: 148 QLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEK 197
Score = 37 (18.1 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 103 NKSLSALRMNSSHH 116
N S++ALR+ + H
Sbjct: 318 NSSIAALRLKAKEH 331
>UNIPROTKB|Q9JLT7 [details] [associations]
symbol:Rax "Retinal homeobox protein Rx" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
Length = 342
Score = 157 (60.3 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL ELE AF KSHYPD+Y REELA + QVWFQNRRAK+R+QEK
Sbjct: 148 QLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEK 197
Score = 37 (18.1 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 103 NKSLSALRMNSSHH 116
N S++ALR+ + H
Sbjct: 318 NSSIAALRLKAKEH 331
>UNIPROTKB|Q9Y2V3 [details] [associations]
symbol:RAX "Retinal homeobox protein Rx" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007601 "visual perception" evidence=TAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007601 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 Orphanet:2542 EMBL:AC067859 CleanEx:HS_RAX
HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062 KO:K09332
EMBL:AF115392 IPI:IPI00021025 RefSeq:NP_038463.2 UniGene:Hs.278957
ProteinModelPortal:Q9Y2V3 SMR:Q9Y2V3 STRING:Q9Y2V3
PhosphoSite:Q9Y2V3 DMDM:296452886 PaxDb:Q9Y2V3 PRIDE:Q9Y2V3
DNASU:30062 Ensembl:ENST00000334889 GeneID:30062 KEGG:hsa:30062
UCSC:uc002lhx.3 GeneCards:GC18M056909 H-InvDB:HIX0202674
HGNC:HGNC:18662 MIM:601881 MIM:611038 neXtProt:NX_Q9Y2V3
PharmGKB:PA38626 InParanoid:Q9Y2V3 OMA:CGPGFGD PhylomeDB:Q9Y2V3
ChiTaRS:RAX GenomeRNAi:30062 NextBio:52852 ArrayExpress:Q9Y2V3
Bgee:Q9Y2V3 Genevestigator:Q9Y2V3 GermOnline:ENSG00000134438
Uniprot:Q9Y2V3
Length = 346
Score = 157 (60.3 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL ELE AF KSHYPD+Y REELA + QVWFQNRRAK+R+QEK
Sbjct: 147 QLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEK 196
Score = 37 (18.1 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 103 NKSLSALRMNSSHH 116
N S++ALR+ + H
Sbjct: 322 NSSIAALRLKAKEH 335
>UNIPROTKB|F1SMS6 [details] [associations]
symbol:RAX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
OMA:CGPGFGD EMBL:CU076088 Ensembl:ENSSSCT00000005417 Uniprot:F1SMS6
Length = 347
Score = 157 (60.3 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL ELE AF KSHYPD+Y REELA + QVWFQNRRAK+R+QEK
Sbjct: 148 QLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEK 197
Score = 37 (18.1 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 103 NKSLSALRMNSSHH 116
N S++ALR+ + H
Sbjct: 323 NSSIAALRLKAKEH 336
>UNIPROTKB|E1BHB8 [details] [associations]
symbol:LOC615339 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
OMA:CGPGFGD EMBL:DAAA02057180 IPI:IPI00710082
Ensembl:ENSBTAT00000030986 Uniprot:E1BHB8
Length = 351
Score = 157 (60.3 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL ELE AF KSHYPD+Y REELA + QVWFQNRRAK+R+QEK
Sbjct: 148 QLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEK 197
Score = 37 (18.1 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 103 NKSLSALRMNSSHH 116
N S++ALR+ + H
Sbjct: 327 NSSIAALRLKAKEH 340
>ZFIN|ZDB-GENE-990415-236 [details] [associations]
symbol:rx1 "retinal homeobox gene 1" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0010842 "retina layer formation" evidence=IMP]
[GO:0003407 "neural retina development" evidence=IMP] [GO:0060219
"camera-type eye photoreceptor cell differentiation"
evidence=IGI;IMP] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-236 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010842
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104256 GO:GO:0060219 HOVERGEN:HBG021349
KO:K09332 EMBL:CR936300 OMA:MVDDSCL EMBL:BC060890 IPI:IPI00481573
RefSeq:NP_571300.2 UniGene:Dr.75761 SMR:Q6P984 STRING:Q6P984
Ensembl:ENSDART00000106166 GeneID:30472 KEGG:dre:30472 CTD:30472
InParanoid:Q6P984 NextBio:20806865 Uniprot:Q6P984
Length = 330
Score = 157 (60.3 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL ELE AF KSHYPD+Y REELA + QVWFQNRRAK+R+QEK
Sbjct: 148 QLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEK 197
Score = 35 (17.4 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 103 NKSLSALRMNSSHH 116
+ S++ALRM + H
Sbjct: 305 SSSIAALRMKAKEH 318
>UNIPROTKB|F1P961 [details] [associations]
symbol:ALX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060021 "palate development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0014031
"mesenchymal cell development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0030326 GO:GO:0001843 OMA:QLAMRTE
GO:GO:0048704 GO:GO:0014031 GO:GO:0060021 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
EMBL:AAEX03009903 ProteinModelPortal:F1P961
Ensembl:ENSCAFT00000009642 Uniprot:F1P961
Length = 252
Score = 149 (57.5 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKA 49
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+A
Sbjct: 69 QLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQA 125
Score = 36 (17.7 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 98 EDEWYNKSLSALRMNSSHHS-NLATPM 123
E E + S++ LRM + H+ N++ M
Sbjct: 226 EFERRSSSIAVLRMKAKEHTANISWAM 252
>UNIPROTKB|E1C121 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 UniGene:Gga.962
CTD:5307 KO:K09356 GeneTree:ENSGT00700000104438 EMBL:AADN02028369
IPI:IPI00971376 RefSeq:NP_001161156.1 RefSeq:NP_001161157.1
RefSeq:NP_001161158.1 Ensembl:ENSGALT00000009427 GeneID:374201
KEGG:gga:374201 NextBio:20813705 Uniprot:E1C121
Length = 302
Score = 142 (55.0 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 44/122 (36%), Positives = 63/122 (51%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 88 QQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQMDLCKN 147
Query: 54 -VIPTCNGAMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPG-MSTEDEWYNKSLSALRM 111
+P +G M Y GY PY N+ L P +ST+ + S+S L
Sbjct: 148 GYVPQFSGLMQP--YDDMYAGY-PY------NKWATKSLTPAPLSTKSFTFFNSMSPLSS 198
Query: 112 NS 113
S
Sbjct: 199 QS 200
Score = 49 (22.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ S HS+ LQ
Sbjct: 267 NSSLASLRLKSKQHSSFGYSSLQ 289
>UNIPROTKB|F1P452 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000988 "protein binding transcription
factor activity" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0014707 "branchiomeric
skeletal muscle development" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005737
GO:GO:0005730 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:AADN02028369 IPI:IPI00820270
Ensembl:ENSGALT00000010289 Uniprot:F1P452
Length = 311
Score = 142 (55.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 44/122 (36%), Positives = 63/122 (51%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 98 QQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQMDLCKN 157
Query: 54 -VIPTCNGAMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPG-MSTEDEWYNKSLSALRM 111
+P +G M Y GY PY N+ L P +ST+ + S+S L
Sbjct: 158 GYVPQFSGLMQP--YDDMYAGY-PY------NKWATKSLTPAPLSTKSFTFFNSMSPLSS 208
Query: 112 NS 113
S
Sbjct: 209 QS 210
Score = 49 (22.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ S HS+ LQ
Sbjct: 277 NSSLASLRLKSKQHSSFGYSSLQ 299
>ZFIN|ZDB-GENE-990708-7 [details] [associations]
symbol:otpb "orthopedia homolog b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0021884 "forebrain
neuron development" evidence=IGI] [GO:0021854 "hypothalamus
development" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990708-7 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0000976 HSSP:P06601
EMBL:AF071496 EMBL:BC076366 IPI:IPI00512446 IPI:IPI00817208
RefSeq:NP_571175.1 UniGene:Dr.81295 ProteinModelPortal:Q6DGH9
SMR:Q6DGH9 STRING:Q6DGH9 Ensembl:ENSDART00000081249
Ensembl:ENSDART00000134606 GeneID:30316 KEGG:dre:30316 CTD:30316
eggNOG:NOG256838 HOVERGEN:HBG001617 InParanoid:Q6DGH9
OrthoDB:EOG4FXR8D NextBio:20806755 ArrayExpress:Q6DGH9 Bgee:Q6DGH9
Uniprot:Q6DGH9
Length = 315
Score = 151 (58.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTP-S 53
QL ELE +FAK+HYPDI+ REELA+ QVWFQNRRAK++K++K P +
Sbjct: 110 QLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGT 169
Query: 54 VIPT 57
++PT
Sbjct: 170 LLPT 173
Score = 39 (18.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 59 NGAMMRNIYPTTSRGYQP-YPH--PNTINRQHFVILVPGMSTE---DEWYNKSLSALRMN 112
+G++ N S YQP +P P +++ V P + + D W S+++LR
Sbjct: 245 SGSLSSNGSGLQSHLYQPTFPGMVPASLSGPTNVTGSPQLCSSPDSDMWRGTSIASLRRK 304
Query: 113 SSHHS 117
+ H+
Sbjct: 305 ALEHT 309
>ZFIN|ZDB-GENE-050208-140 [details] [associations]
symbol:alx4b "aristaless-like homeobox 4b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-050208-140 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG004214 eggNOG:NOG309608
OrthoDB:EOG4ZGPCG EMBL:BC135029 IPI:IPI00639059
RefSeq:NP_001082826.1 UniGene:Dr.90982 ProteinModelPortal:A4IGC5
SMR:A4IGC5 GeneID:497424 KEGG:dre:497424 CTD:497424
NextBio:20866003 Uniprot:A4IGC5
Length = 364
Score = 149 (57.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 32/59 (54%), Positives = 41/59 (69%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALT 51
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+ T
Sbjct: 182 QLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRT 240
Score = 44 (20.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 95 MSTEDEWYNKSLSALRMNSSHHSNLAT 121
+S E + + S+++LRM + HS T
Sbjct: 335 LSVEPDRKSSSIASLRMKAKEHSAAIT 361
>UNIPROTKB|O93582 [details] [associations]
symbol:Alx-4 "Paired type homeodomain protein" species:9031
"Gallus gallus" [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0042981 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 CTD:60529
HOVERGEN:HBG004214 KO:K09451 eggNOG:NOG309608 OMA:KFQPQPS
OrthoDB:EOG4ZGPCG HSSP:P06601 EMBL:AADN02033349 EMBL:AADN02033350
EMBL:AADN02033351 EMBL:AADN02033352 EMBL:AF092538 IPI:IPI00588188
RefSeq:NP_989493.1 UniGene:Gga.934 SMR:O93582 STRING:O93582
Ensembl:ENSGALT00000013020 GeneID:373976 KEGG:gga:373976
InParanoid:O93582 NextBio:20813505 Uniprot:O93582
Length = 387
Score = 148 (57.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 32/59 (54%), Positives = 41/59 (69%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALT 51
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+ T
Sbjct: 203 QLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRT 261
Score = 44 (20.5 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 95 MSTEDEWYNKSLSALRMNSSHHS 117
+++E + + S++ALRM + HS
Sbjct: 358 LNSEPDRKSSSIAALRMKAKEHS 380
>ZFIN|ZDB-GENE-990415-15 [details] [associations]
symbol:arxa "aristaless related homeobox a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-15 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
eggNOG:NOG313402 KO:K09452 EMBL:AB006104 IPI:IPI00502004
RefSeq:NP_571459.1 UniGene:Dr.9011 ProteinModelPortal:O42115
SMR:O42115 STRING:O42115 PRIDE:O42115 Ensembl:ENSDART00000080810
GeneID:30657 KEGG:dre:30657 CTD:30657 GeneTree:ENSGT00700000104279
HOGENOM:HOG000012381 HOVERGEN:HBG004285 InParanoid:O42115
OMA:HYLEGGP OrthoDB:EOG43TZW9 NextBio:20807013 ArrayExpress:O42115
Bgee:O42115 Uniprot:O42115
Length = 453
Score = 157 (60.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 39/88 (44%), Positives = 51/88 (57%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF K+HYPD++ REELA+ QVWFQNRRAK+RK+EK +A P+
Sbjct: 226 QLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVQA-HPTG 284
Query: 55 IPTCNGAMMRNIYPTTSRG--YQPYPHP 80
+P + G + P+PHP
Sbjct: 285 LPFPGPLAAAHPLSHYLEGGPFPPHPHP 312
Score = 37 (18.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 96 STEDEWYNKSLSALRMNSSHHSNLATPM 123
ST + S++ALR+ + HS T +
Sbjct: 413 STAADRRASSIAALRLKAKEHSAQLTQL 440
>UNIPROTKB|P56673 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
EMBL:AF069397 IPI:IPI00589641 UniGene:Gga.962
ProteinModelPortal:P56673 SMR:P56673 STRING:P56673 eggNOG:NOG249113
HOGENOM:HOG000273886 HOVERGEN:HBG068770 InParanoid:P56673
OrthoDB:EOG4R503Q Uniprot:P56673
Length = 311
Score = 144 (55.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 43/122 (35%), Positives = 63/122 (51%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 98 QQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQMDLCKN 157
Query: 54 -VIPTCNGAMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPG-MSTEDEWYNKSLSALRM 111
+P +G M P Y YP+ N + L P +ST+ + S+S L
Sbjct: 158 GYVPQFSGLMQ----PYDDM-YAGYPYNNWATKS----LTPAPLSTKSFTFFNSMSPLSS 208
Query: 112 NS 113
S
Sbjct: 209 QS 210
Score = 43 (20.2 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++L + S HS+ LQ
Sbjct: 277 NSSLASLALKSKQHSSFGYSSLQ 299
>MGI|MGI:108359 [details] [associations]
symbol:Alx4 "aristaless-like homeobox 4" species:10090 "Mus
musculus" [GO:0001942 "hair follicle development" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IDA;IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IGI]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0035108 "limb morphogenesis" evidence=IGI;IMP] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IGI] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IGI] [GO:0042733
"embryonic digit morphogenesis" evidence=IGI;IMP] [GO:0042981
"regulation of apoptotic process" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0048565 "digestive tract development"
evidence=IMP] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048705 "skeletal system morphogenesis"
evidence=IMP] [GO:0060021 "palate development" evidence=IGI]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:108359 GO:GO:0042981 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0009791 GO:GO:0001942
GO:GO:0007517 GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518
GO:GO:0048704 GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 CTD:60529
HOVERGEN:HBG004214 KO:K09451 eggNOG:NOG309608 OMA:KFQPQPS
OrthoDB:EOG4ZGPCG GO:GO:0048565 GO:GO:0042733 EMBL:AF001465
IPI:IPI00127559 PIR:JC6522 RefSeq:NP_031468.1 UniGene:Mm.389389
ProteinModelPortal:O35137 SMR:O35137 STRING:O35137
PhosphoSite:O35137 PRIDE:O35137 Ensembl:ENSMUST00000042078
GeneID:11695 KEGG:mmu:11695 InParanoid:O35137 NextBio:279357
Bgee:O35137 CleanEx:MM_ALX4 Genevestigator:O35137
GermOnline:ENSMUSG00000040310 Uniprot:O35137
Length = 399
Score = 148 (57.2 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 32/59 (54%), Positives = 41/59 (69%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALT 51
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+ T
Sbjct: 213 QLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRT 271
Score = 43 (20.2 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 95 MSTEDEWYNKSLSALRMNSSHHS 117
M+ E + S++ALRM + HS
Sbjct: 370 MNGEPDRKTSSIAALRMKAKEHS 392
>FB|FBgn0000061 [details] [associations]
symbol:al "aristaless" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0007449 "proximal/distal pattern formation,
imaginal disc" evidence=NAS] [GO:0048800 "antennal morphogenesis"
evidence=IMP] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0035015
"elongation of arista core" evidence=IMP] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IEP] [GO:0035218
"leg disc development" evidence=IMP] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0007480 "imaginal
disc-derived leg morphogenesis" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043234
EMBL:AE014134 GO:GO:0003700 GO:GO:0045747 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0022416 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 EMBL:L08401
EMBL:AY121696 PIR:A40685 RefSeq:NP_722629.1 UniGene:Dm.6423
PDB:3A01 PDB:3A02 PDB:3LNQ PDBsum:3A01 PDBsum:3A02 PDBsum:3LNQ
ProteinModelPortal:Q06453 SMR:Q06453 DIP:DIP-23247N IntAct:Q06453
MINT:MINT-827785 STRING:Q06453 EnsemblMetazoa:FBtr0078053
GeneID:33208 KEGG:dme:Dmel_CG3935 UCSC:CG3935-RA CTD:33208
FlyBase:FBgn0000061 eggNOG:NOG313402 InParanoid:Q06453 KO:K09452
OMA:FTHLGFQ OrthoDB:EOG41ZCSM PhylomeDB:Q06453
EvolutionaryTrace:Q06453 GenomeRNAi:33208 NextBio:782439
Bgee:Q06453 GermOnline:CG3935 GO:GO:0000976 GO:GO:0035015
GO:GO:0007480 Uniprot:Q06453
Length = 408
Score = 152 (58.6 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE AF+++HYPD++ REELA+ QVWFQNRRAK+RKQEK
Sbjct: 96 QLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEK 145
Score = 38 (18.4 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 16/78 (20%), Positives = 26/78 (33%)
Query: 41 KQEKQLQKALTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDE 100
+Q L T V T + + R + P + + P P T + + +
Sbjct: 329 QQASSLSPTQTSPVALTLSHSPQRQLPPPSHQAPPPPPRAATPPEDRRTSSIAALRLKAR 388
Query: 101 WYNKSLSALRMNSSHHSN 118
+ L LR N H N
Sbjct: 389 EHELKLELLRQNG--HGN 404
>UNIPROTKB|F1N3B5 [details] [associations]
symbol:VSX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060040 "retinal bipolar neuron differentiation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0008285 GO:GO:0005730
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0045165
GO:GO:0060040 KO:K09336 InterPro:IPR023339 PROSITE:PS51496
CTD:338917 OMA:FSKPEYQ EMBL:DAAA02029609 IPI:IPI00716073
RefSeq:NP_001180179.1 UniGene:Bt.106523 Ensembl:ENSBTAT00000019481
GeneID:528647 KEGG:bta:528647 NextBio:20874875 Uniprot:F1N3B5
Length = 361
Score = 145 (56.1 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF ++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK ++ SV
Sbjct: 159 QLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRS---SV 215
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 216 MAEYGLYGAMVRHSIP 231
Score = 43 (20.2 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 93 PGMSTEDEWYNKSLSALRMNSSHHS 117
P +++E S++ALR + HS
Sbjct: 293 PAAMSQEELRENSIAALRARAQEHS 317
>UNIPROTKB|E2RTB3 [details] [associations]
symbol:VSX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060040 "retinal bipolar neuron
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0008285
GO:GO:0005730 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
GO:GO:0045165 GO:GO:0060040 KO:K09336 InterPro:IPR023339
PROSITE:PS51496 CTD:338917 OMA:FSKPEYQ EMBL:AAEX03005845
RefSeq:XP_547902.3 Ensembl:ENSCAFT00000026767 GeneID:490780
KEGG:cfa:490780 Uniprot:E2RTB3
Length = 361
Score = 145 (56.1 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF ++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK ++ SV
Sbjct: 159 QLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRS---SV 215
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 216 MAEYGLYGAMVRHSIP 231
Score = 43 (20.2 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 93 PGMSTEDEWYNKSLSALRMNSSHHS 117
P +++E S++ALR + HS
Sbjct: 293 PAAMSQEELRENSIAALRARAQEHS 317
>ZFIN|ZDB-GENE-070712-3 [details] [associations]
symbol:alx4a "aristaless-like homeobox 4a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-070712-3 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 KO:K09451 EMBL:BX510305
IPI:IPI00800494 RefSeq:XP_001340966.1 UniGene:Dr.115666
Ensembl:ENSDART00000124363 GeneID:100006399 KEGG:dre:100006399
CTD:100006399 NextBio:20787094 Uniprot:E7FGP3
Length = 368
Score = 149 (57.5 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 32/59 (54%), Positives = 41/59 (69%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALT 51
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+ T
Sbjct: 186 QLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRT 244
Score = 39 (18.8 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 103 NKSLSALRMNSSHHS 117
+ S++ALRM + HS
Sbjct: 347 SSSIAALRMKAKEHS 361
>UNIPROTKB|F1NC94 [details] [associations]
symbol:ALX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0014031 "mesenchymal cell development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 OMA:QLAMRTE InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 EMBL:AADN02009698
EMBL:AADN02009699 IPI:IPI00586585 Ensembl:ENSGALT00000018176
Uniprot:F1NC94
Length = 318
Score = 149 (57.5 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKA 49
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+A
Sbjct: 135 QLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQA 191
Score = 36 (17.7 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 98 EDEWYNKSLSALRMNSSHHS-NLATPM 123
E E + S++ LRM + H+ N++ M
Sbjct: 292 EFERRSSSIAVLRMKAKEHAANISWAM 318
>UNIPROTKB|E1BKK2 [details] [associations]
symbol:ALX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060021 "palate development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0014031 "mesenchymal cell development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001843 "neural
tube closure" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0030326 GO:GO:0001843 CTD:8092 KO:K09334 OMA:QLAMRTE
GO:GO:0048704 GO:GO:0014031 GO:GO:0060021 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
EMBL:DAAA02012574 IPI:IPI00704637 RefSeq:NP_001179220.1
UniGene:Bt.87394 Ensembl:ENSBTAT00000019938 GeneID:539689
KEGG:bta:539689 NextBio:20878156 Uniprot:E1BKK2
Length = 326
Score = 149 (57.5 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKA 49
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+A
Sbjct: 143 QLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQA 199
Score = 36 (17.7 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 98 EDEWYNKSLSALRMNSSHHS-NLATPM 123
E E + S++ LRM + H+ N++ M
Sbjct: 300 EFERRSSSIAVLRMKAKEHAANISWAM 326
>UNIPROTKB|Q15699 [details] [associations]
symbol:ALX1 "ALX homeobox protein 1" species:9606 "Homo
sapiens" [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0014031 "mesenchymal cell
development" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0003714 "transcription corepressor activity"
evidence=TAS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0007420 "brain development"
evidence=TAS] [GO:0001502 "cartilage condensation" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003714
GO:GO:0045893 GO:GO:0007420 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0006366 GO:GO:0030326
GO:GO:0001843 EMBL:U31986 EMBL:AJ558236 EMBL:AJ558237 EMBL:BC010923
IPI:IPI00018956 RefSeq:NP_008913.2 UniGene:Hs.41683
ProteinModelPortal:Q15699 SMR:Q15699 IntAct:Q15699
MINT:MINT-1465062 STRING:Q15699 PhosphoSite:Q15699 DMDM:90111820
PaxDb:Q15699 PRIDE:Q15699 DNASU:8092 Ensembl:ENST00000316824
GeneID:8092 KEGG:hsa:8092 UCSC:uc001tae.4 CTD:8092
GeneCards:GC12P085674 H-InvDB:HIX0018568 HGNC:HGNC:1494
HPA:HPA001598 HPA:HPA018905 MIM:601527 MIM:613456
neXtProt:NX_Q15699 PharmGKB:PA162376294 eggNOG:NOG304827
HOGENOM:HOG000231518 HOVERGEN:HBG050798 InParanoid:Q15699 KO:K09334
OMA:QLAMRTE OrthoDB:EOG4G4GR5 PhylomeDB:Q15699 GenomeRNAi:8092
NextBio:30733 Bgee:Q15699 CleanEx:HS_ALX1 Genevestigator:Q15699
GermOnline:ENSG00000180318 GO:GO:0001502 GO:GO:0048704
GO:GO:0014031 GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 Uniprot:Q15699
Length = 326
Score = 149 (57.5 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKA 49
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+A
Sbjct: 143 QLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQA 199
Score = 36 (17.7 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 98 EDEWYNKSLSALRMNSSHHS-NLATPM 123
E E + S++ LRM + H+ N++ M
Sbjct: 300 EFERRSSSIAVLRMKAKEHTANISWAM 326
>UNIPROTKB|F1SPX2 [details] [associations]
symbol:ALX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060021 "palate development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0014031 "mesenchymal cell development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001843 "neural
tube closure" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0030326 GO:GO:0001843 CTD:8092 KO:K09334 OMA:QLAMRTE
GO:GO:0048704 GO:GO:0014031 GO:GO:0060021 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
EMBL:FP102711 RefSeq:XP_003126788.1 Ensembl:ENSSSCT00000001019
GeneID:100525700 KEGG:ssc:100525700 Uniprot:F1SPX2
Length = 326
Score = 149 (57.5 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKA 49
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+A
Sbjct: 143 QLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQA 199
Score = 36 (17.7 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 98 EDEWYNKSLSALRMNSSHHS-NLATPM 123
E E + S++ LRM + H+ N++ M
Sbjct: 300 EFERRSSSIAVLRMKAKEHTANISWAM 326
>MGI|MGI:104621 [details] [associations]
symbol:Alx1 "ALX homeobox 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001843 "neural tube
closure" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0014031 "mesenchymal cell development"
evidence=IMP] [GO:0030326 "embryonic limb morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0060021 "palate development" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:104621 GO:GO:0009952
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0030326 GO:GO:0001843 CTD:8092 eggNOG:NOG304827
HOGENOM:HOG000231518 HOVERGEN:HBG050798 KO:K09334 OMA:QLAMRTE
OrthoDB:EOG4G4GR5 GO:GO:0048704 GO:GO:0014031 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 EMBL:AK047846
EMBL:AK086731 EMBL:BC052200 IPI:IPI00227026 RefSeq:NP_766141.1
UniGene:Mm.19287 ProteinModelPortal:Q8C8B0 SMR:Q8C8B0 STRING:Q8C8B0
PhosphoSite:Q8C8B0 PRIDE:Q8C8B0 Ensembl:ENSMUST00000040859
Ensembl:ENSMUST00000167156 GeneID:216285 KEGG:mmu:216285
UCSC:uc007gyg.1 GeneTree:ENSGT00700000104013 InParanoid:Q8C8B0
NextBio:375099 Bgee:Q8C8B0 CleanEx:MM_ALX1 Genevestigator:Q8C8B0
GermOnline:ENSMUSG00000036602 Uniprot:Q8C8B0
Length = 326
Score = 149 (57.5 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKA 49
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+A
Sbjct: 143 QLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQA 199
Score = 36 (17.7 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 98 EDEWYNKSLSALRMNSSHHS-NLATPM 123
E E + S++ LRM + H+ N++ M
Sbjct: 300 EFERRSSSIAVLRMKAKEHTANISWAM 326
>RGD|2273 [details] [associations]
symbol:Alx1 "ALX homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0001501 "skeletal system
development" evidence=TAS] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IMP] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005667 "transcription factor
complex" evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0014031 "mesenchymal cell development"
evidence=IEA;ISO] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0060021 "palate development" evidence=IEA;ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:2273 GO:GO:0005634
GO:GO:0045893 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0030326 GO:GO:0001501 GO:GO:0001843 CTD:8092
eggNOG:NOG304827 HOGENOM:HOG000231518 HOVERGEN:HBG050798 KO:K09334
OMA:QLAMRTE OrthoDB:EOG4G4GR5 GO:GO:0048704 GO:GO:0014031
GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 EMBL:L14018 IPI:IPI00205025 PIR:A47523
RefSeq:NP_037053.1 UniGene:Rn.9282 ProteinModelPortal:Q63087
SMR:Q63087 STRING:Q63087 PhosphoSite:Q63087 PRIDE:Q63087
Ensembl:ENSRNOT00000006007 GeneID:25401 KEGG:rno:25401 UCSC:RGD:2273
InParanoid:Q63087 NextBio:606493 ArrayExpress:Q63087
Genevestigator:Q63087 GermOnline:ENSRNOG00000004390 Uniprot:Q63087
Length = 326
Score = 149 (57.5 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKA 49
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+A
Sbjct: 143 QLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQA 199
Score = 36 (17.7 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 98 EDEWYNKSLSALRMNSSHHS-NLATPM 123
E E + S++ LRM + H+ N++ M
Sbjct: 300 EFERRSSSIAVLRMKAKEHTANISWAM 326
>UNIPROTKB|F1S3F6 [details] [associations]
symbol:VSX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060040 "retinal bipolar neuron differentiation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0008285 GO:GO:0005730
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0045165
GO:GO:0060040 InterPro:IPR023339 PROSITE:PS51496 OMA:FSKPEYQ
EMBL:CU463324 Ensembl:ENSSSCT00000002627 Uniprot:F1S3F6
Length = 377
Score = 145 (56.1 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF ++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK ++ SV
Sbjct: 175 QLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRS---SV 231
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 232 MAEYGLYGAMVRHSIP 247
Score = 43 (20.2 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 93 PGMSTEDEWYNKSLSALRMNSSHHS 117
P +++E S++ALR + HS
Sbjct: 309 PATMSQEELRENSIAALRARAQEHS 333
>ZFIN|ZDB-GENE-050419-191 [details] [associations]
symbol:alx1 "ALX homeobox 1" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-050419-191 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
EMBL:BX649507 IPI:IPI00619192 Ensembl:ENSDART00000091244
Uniprot:F1QTN5
Length = 321
Score = 148 (57.2 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKA 49
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+A
Sbjct: 132 QLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQVWFQNRRAKWRKRERYGQIQQA 188
Score = 36 (17.7 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 98 EDEWYNKSLSALRMNSSHHS-NLATPM 123
E E + S++ LRM + H+ N++ M
Sbjct: 295 EFERRSSSIAVLRMKAKEHTANISWAM 321
>ZFIN|ZDB-GENE-041229-4 [details] [associations]
symbol:pitx3 "paired-like homeodomain transcription
factor 3" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0035270 "endocrine system
development" evidence=IMP] [GO:0021984 "adenohypophysis
development" evidence=IMP] [GO:0043010 "camera-type eye
development" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0002088 "lens development in
camera-type eye" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-041229-4 GO:GO:0005634 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0021984 GO:GO:0002088 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 EMBL:AY525643
EMBL:AY639155 EMBL:AY643793 EMBL:CR626878 EMBL:BC094961
IPI:IPI00485762 RefSeq:NP_991238.1 UniGene:Dr.89375
ProteinModelPortal:Q6QU75 SMR:Q6QU75 STRING:Q6QU75
Ensembl:ENSDART00000102538 GeneID:402974 KEGG:dre:402974 CTD:5309
InParanoid:Q6DUF5 KO:K09357 OMA:ASPYMYR OrthoDB:EOG42Z4R4
NextBio:20816783 Bgee:Q6QU75 Uniprot:Q6QU75
Length = 293
Score = 127 (49.8 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKAL 50
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L
Sbjct: 70 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAEL 126
Score = 57 (25.1 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ + H+N A P +Q
Sbjct: 254 NSSLASLRLKAKQHANFAYPAVQ 276
>UNIPROTKB|Q4LAL6 [details] [associations]
symbol:ALX4 "Homeobox protein aristaless-like 4"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 EMBL:AM048630
IPI:IPI00714667 RefSeq:NP_001025475.1 UniGene:Bt.47446
ProteinModelPortal:Q4LAL6 SMR:Q4LAL6 PRIDE:Q4LAL6 GeneID:594846
KEGG:bta:594846 CTD:60529 HOVERGEN:HBG004214 KO:K09451
NextBio:20892408 Uniprot:Q4LAL6
Length = 397
Score = 148 (57.2 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 32/59 (54%), Positives = 41/59 (69%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALT 51
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+ T
Sbjct: 211 QLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRT 269
Score = 40 (19.1 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 95 MSTEDEWYNKSLSALRMNSSHHS 117
++ E + S++ALRM + HS
Sbjct: 368 LNGEPDRKTSSIAALRMKAKEHS 390
>UNIPROTKB|Q9H161 [details] [associations]
symbol:ALX4 "Homeobox protein aristaless-like 4"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA;NAS] [GO:0001501 "skeletal system
development" evidence=NAS] [GO:0001942 "hair follicle development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0042981 GO:GO:0009952
GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0009791 GO:GO:0001942 GO:GO:0001501 GO:GO:0007517
GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518 GO:GO:0048704
GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
CTD:60529 HOVERGEN:HBG004214 KO:K09451 EMBL:AF294629 EMBL:AF308822
EMBL:AF308823 EMBL:AF308824 EMBL:AF308825 EMBL:AJ404888
EMBL:AJ279074 EMBL:AJ279075 EMBL:AJ279076 EMBL:AJ279077
EMBL:AB058691 IPI:IPI00334769 RefSeq:NP_068745.2 UniGene:Hs.436055
PDB:2M0C PDBsum:2M0C ProteinModelPortal:Q9H161 SMR:Q9H161
STRING:Q9H161 PhosphoSite:Q9H161 DMDM:254763249 PaxDb:Q9H161
PRIDE:Q9H161 DNASU:60529 Ensembl:ENST00000329255 GeneID:60529
KEGG:hsa:60529 UCSC:uc001myb.3 GeneCards:GC11M044238 HGNC:HGNC:450
MIM:601224 MIM:605420 MIM:609597 MIM:613451 neXtProt:NX_Q9H161
Orphanet:228390 Orphanet:60015 Orphanet:52022 PharmGKB:PA24755
eggNOG:NOG309608 InParanoid:Q9H161 OMA:KFQPQPS OrthoDB:EOG4ZGPCG
PhylomeDB:Q9H161 GenomeRNAi:60529 NextBio:65433 Bgee:Q9H161
CleanEx:HS_ALX4 Genevestigator:Q9H161 GermOnline:ENSG00000052850
GO:GO:0048565 GO:GO:0042733 Uniprot:Q9H161
Length = 411
Score = 148 (57.2 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 32/59 (54%), Positives = 41/59 (69%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALT 51
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+ T
Sbjct: 225 QLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRT 283
Score = 40 (19.1 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 95 MSTEDEWYNKSLSALRMNSSHHS 117
++ E + S++ALRM + HS
Sbjct: 382 LNGEPDRKTSSIAALRMKAKEHS 404
>UNIPROTKB|E2RLA0 [details] [associations]
symbol:ALX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048565 "digestive tract development" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0042981 GO:GO:0009952
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0009791 GO:GO:0001942
GO:GO:0007517 GO:GO:0035116 GO:GO:0035115 GO:GO:0048704
GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 CTD:60529 KO:K09451 OMA:KFQPQPS
GO:GO:0048565 GO:GO:0042733 EMBL:AAEX03011521 RefSeq:XP_850737.1
Ensembl:ENSCAFT00000015028 GeneID:609979 KEGG:cfa:609979
NextBio:20895553 Uniprot:E2RLA0
Length = 414
Score = 148 (57.2 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 32/59 (54%), Positives = 41/59 (69%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALT 51
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+ T
Sbjct: 228 QLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRT 286
Score = 40 (19.1 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 95 MSTEDEWYNKSLSALRMNSSHHS 117
++ E + S++ALRM + HS
Sbjct: 385 LNGEPDRKTSSIAALRMKAKEHS 407
>UNIPROTKB|E1BYW7 [details] [associations]
symbol:DRGX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0009593 "detection of chemical
stimulus" evidence=IEA] [GO:0016048 "detection of temperature
stimulus" evidence=IEA] [GO:0021516 "dorsal spinal cord
development" evidence=IEA] [GO:0021559 "trigeminal nerve
development" evidence=IEA] [GO:0050954 "sensory perception of
mechanical stimulus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0009593 GO:GO:0016048 CTD:644168
OMA:KGSPLCS EMBL:AADN02027760 EMBL:AADN02027761 IPI:IPI00590363
RefSeq:XP_001234656.2 Ensembl:ENSGALT00000010049 GeneID:771373
KEGG:gga:771373 Uniprot:E1BYW7
Length = 260
Score = 142 (55.0 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
+QL LEA FA++HYPD++ REELA+ QVWFQNRRAK+RK E+
Sbjct: 43 QQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 93
Score = 36 (17.7 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 105 SLSALRMNSSHHS 117
S++ALRM + HS
Sbjct: 203 SVAALRMKAREHS 215
>UNIPROTKB|E1BDA0 [details] [associations]
symbol:DRGX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0050954 "sensory
perception of mechanical stimulus" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0016048 "detection of
temperature stimulus" evidence=IEA] [GO:0009593 "detection of
chemical stimulus" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0021559 GO:GO:0021516
GO:GO:0009593 GO:GO:0016048 GO:GO:0050954 CTD:644168 OMA:KGSPLCS
EMBL:DAAA02062229 IPI:IPI00734128 RefSeq:XP_002699015.1
Ensembl:ENSBTAT00000015907 GeneID:521995 KEGG:bta:521995
NextBio:20873419 Uniprot:E1BDA0
Length = 263
Score = 142 (55.0 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
+QL LEA FA++HYPD++ REELA+ QVWFQNRRAK+RK E+
Sbjct: 43 QQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 93
Score = 36 (17.7 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 105 SLSALRMNSSHHS 117
S++ALRM + HS
Sbjct: 205 SVAALRMKAREHS 217
>UNIPROTKB|F1SDX7 [details] [associations]
symbol:DRGX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0050954 "sensory
perception of mechanical stimulus" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0016048 "detection of
temperature stimulus" evidence=IEA] [GO:0009593 "detection of
chemical stimulus" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0021559 GO:GO:0021516
GO:GO:0009593 GO:GO:0016048 GO:GO:0050954 OMA:KGSPLCS EMBL:CT990615
Ensembl:ENSSSCT00000011374 Uniprot:F1SDX7
Length = 263
Score = 142 (55.0 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
+QL LEA FA++HYPD++ REELA+ QVWFQNRRAK+RK E+
Sbjct: 43 QQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 93
Score = 36 (17.7 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 105 SLSALRMNSSHHS 117
S++ALRM + HS
Sbjct: 205 SVAALRMKAREHS 217
>MGI|MGI:2148204 [details] [associations]
symbol:Prrxl1 "paired related homeobox protein-like 1"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0009593 "detection of chemical stimulus"
evidence=IMP] [GO:0016048 "detection of temperature stimulus"
evidence=IMP] [GO:0021516 "dorsal spinal cord development"
evidence=IMP] [GO:0021559 "trigeminal nerve development"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0050954 "sensory perception of mechanical stimulus"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:2148204 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
GO:GO:0021559 GO:GO:0021516 eggNOG:NOG39948 HOVERGEN:HBG106743
OrthoDB:EOG49CQ88 EMBL:EU670677 EMBL:EU670678 EMBL:AK039633
EMBL:BC132613 EMBL:BC145917 EMBL:AY116506 IPI:IPI00280476
IPI:IPI00896701 RefSeq:NP_001001796.1 UniGene:Mm.119274 HSSP:Q99697
ProteinModelPortal:Q8BYH0 SMR:Q8BYH0 STRING:Q8BYH0
PhosphoSite:Q8BYH0 PRIDE:Q8BYH0 Ensembl:ENSMUST00000068938
GeneID:107751 KEGG:mmu:107751 CTD:107751 HOGENOM:HOG000207632
InParanoid:B2ZIF4 OMA:PPARNIN NextBio:359376 Bgee:Q8BYH0
CleanEx:MM_PRRXL1 Genevestigator:Q8BYH0 GO:GO:0009593 GO:GO:0016048
GO:GO:0050954 Uniprot:Q8BYH0
Length = 263
Score = 142 (55.0 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
+QL LEA FA++HYPD++ REELA+ QVWFQNRRAK+RK E+
Sbjct: 43 QQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 93
Score = 36 (17.7 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 105 SLSALRMNSSHHS 117
S++ALRM + HS
Sbjct: 205 SVAALRMKAREHS 217
>RGD|628616 [details] [associations]
symbol:Prrxl1 "paired related homeobox protein-like 1"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=ISO] [GO:0007409
"axonogenesis" evidence=ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0009593 "detection of chemical stimulus"
evidence=IEA;ISO] [GO:0016048 "detection of temperature stimulus"
evidence=IEA;ISO] [GO:0021516 "dorsal spinal cord development"
evidence=IEA;ISO] [GO:0021559 "trigeminal nerve development"
evidence=IEA;ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0050954 "sensory perception of mechanical
stimulus" evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:U29174 RGD:628616 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0021559
GO:GO:0021516 eggNOG:NOG39948 HOVERGEN:HBG106743 OrthoDB:EOG49CQ88
CTD:107751 GO:GO:0009593 GO:GO:0016048 GO:GO:0050954
IPI:IPI00208300 RefSeq:NP_665710.1 UniGene:Rn.10189
ProteinModelPortal:Q62798 SMR:Q62798 PhosphoSite:Q62798
GeneID:252880 KEGG:rno:252880 UCSC:RGD:628616 InParanoid:Q62798
NextBio:623960 Genevestigator:Q62798 GermOnline:ENSRNOG00000020045
Uniprot:Q62798
Length = 263
Score = 142 (55.0 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
+QL LEA FA++HYPD++ REELA+ QVWFQNRRAK+RK E+
Sbjct: 43 QQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 93
Score = 36 (17.7 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 105 SLSALRMNSSHHS 117
S++ALRM + HS
Sbjct: 205 SVAALRMKAREHS 217
>UNIPROTKB|Q62798 [details] [associations]
symbol:Drgx "Dorsal root ganglia homeobox protein"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:U29174 RGD:628616 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0021559
GO:GO:0021516 eggNOG:NOG39948 HOVERGEN:HBG106743 OrthoDB:EOG49CQ88
CTD:107751 GO:GO:0009593 GO:GO:0016048 GO:GO:0050954
IPI:IPI00208300 RefSeq:NP_665710.1 UniGene:Rn.10189
ProteinModelPortal:Q62798 SMR:Q62798 PhosphoSite:Q62798
GeneID:252880 KEGG:rno:252880 UCSC:RGD:628616 InParanoid:Q62798
NextBio:623960 Genevestigator:Q62798 GermOnline:ENSRNOG00000020045
Uniprot:Q62798
Length = 263
Score = 142 (55.0 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
+QL LEA FA++HYPD++ REELA+ QVWFQNRRAK+RK E+
Sbjct: 43 QQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 93
Score = 36 (17.7 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 105 SLSALRMNSSHHS 117
S++ALRM + HS
Sbjct: 205 SVAALRMKAREHS 217
>UNIPROTKB|E2QSM2 [details] [associations]
symbol:DRGX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0050954
"sensory perception of mechanical stimulus" evidence=IEA]
[GO:0021559 "trigeminal nerve development" evidence=IEA]
[GO:0021516 "dorsal spinal cord development" evidence=IEA]
[GO:0016048 "detection of temperature stimulus" evidence=IEA]
[GO:0009593 "detection of chemical stimulus" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0021559 GO:GO:0021516
GO:GO:0009593 GO:GO:0016048 GO:GO:0050954 OMA:KGSPLCS
EMBL:AAEX03015368 EMBL:AAEX03015367 Ensembl:ENSCAFT00000010667
Uniprot:E2QSM2
Length = 264
Score = 142 (55.0 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
+QL LEA FA++HYPD++ REELA+ QVWFQNRRAK+RK E+
Sbjct: 44 QQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 94
Score = 36 (17.7 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 105 SLSALRMNSSHHS 117
S++ALRM + HS
Sbjct: 206 SVAALRMKAREHS 218
>UNIPROTKB|E1C143 [details] [associations]
symbol:PITX3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0002089 "lens morphogenesis in camera-type eye" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0048666 "neuron development" evidence=IEA] [GO:0070306 "lens
fiber cell differentiation" evidence=IEA] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104438 CTD:5309 KO:K09357 OMA:ASPYMYR
EMBL:AADN02027826 EMBL:AADN02027827 IPI:IPI00591458
RefSeq:XP_421631.2 Ensembl:ENSGALT00000009008 GeneID:423756
KEGG:gga:423756 NextBio:20826179 Uniprot:E1C143
Length = 292
Score = 129 (50.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 70 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKN 129
Query: 54 VIPTCNGAMMRNIYPTTSRGYQPYPHPN 81
GA + Y Y + N
Sbjct: 130 SF----GAQFNGLMQPYDDMYSSYSYNN 153
Score = 53 (23.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ + H+N P +Q
Sbjct: 253 NSSLASLRLKAKQHANFTYPAVQ 275
>ZFIN|ZDB-GENE-070330-1 [details] [associations]
symbol:drgx "dorsal root ganglia homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-070330-1 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 HOVERGEN:HBG106743
CTD:644168 EMBL:AY753211 IPI:IPI00481333 RefSeq:NP_001032182.1
UniGene:Dr.94366 ProteinModelPortal:Q3BD88 SMR:Q3BD88 STRING:Q3BD88
GeneID:560399 KEGG:dre:560399 InParanoid:Q3BD88 NextBio:20883422
Uniprot:Q3BD88
Length = 287
Score = 143 (55.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
+QL LEA FA++HYPD++ REELA+ QVWFQNRRAK+RK E+
Sbjct: 52 QQLEALEAVFAQTHYPDVFAREELAMKINLTEARVQVWFQNRRAKWRKTER 102
Score = 36 (17.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 105 SLSALRMNSSHHS 117
S++ALRM + HS
Sbjct: 211 SVAALRMKAREHS 223
>ZFIN|ZDB-GENE-990714-27 [details] [associations]
symbol:pitx2 "paired-like homeodomain transcription
factor 2" species:7955 "Danio rerio" [GO:0021501 "prechordal plate
formation" evidence=IGI] [GO:0060971 "embryonic heart tube
left/right pattern formation" evidence=IDA] [GO:0071907
"determination of digestive tract left/right asymmetry"
evidence=IDA] [GO:0048382 "mesendoderm development" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043114
"regulation of vascular permeability" evidence=IGI] [GO:0061386
"closure of optic fissure" evidence=IMP] [GO:0048593 "camera-type
eye morphogenesis" evidence=IMP] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IMP] [GO:0048384 "retinoic
acid receptor signaling pathway" evidence=IMP] [GO:0060325 "face
morphogenesis" evidence=IMP] [GO:0048596 "embryonic camera-type eye
morphogenesis" evidence=IMP] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990714-27 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048384
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0060325
GO:GO:0048382 GO:GO:0071907 GO:GO:0048703 GO:GO:0060971
GO:GO:0021501 GO:GO:0061386 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686
EMBL:AF156905 EMBL:AF156906 EMBL:AF181681 EMBL:AF132446
EMBL:AF132447 EMBL:BC092922 IPI:IPI00486280 IPI:IPI00507463
RefSeq:NP_571050.1 UniGene:Dr.81292 ProteinModelPortal:Q9W5Z2
SMR:Q9W5Z2 STRING:Q9W5Z2 Ensembl:ENSDART00000052569
Ensembl:ENSDART00000148319 GeneID:30164 KEGG:dre:30164
InParanoid:Q568C4 OMA:DMYPSYT NextBio:20806634 Bgee:Q9W5Z2
Uniprot:Q9W5Z2
Length = 314
Score = 138 (53.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 92 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKN 151
Query: 54 VI-PTCNGAMMR--NIYPT 69
P NG M ++YP+
Sbjct: 152 GFGPQFNGLMQPYDDMYPS 170
Score = 43 (20.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ + HS+ +Q
Sbjct: 275 NSSLASLRLKAKQHSSFGYASVQ 297
>MGI|MGI:88401 [details] [associations]
symbol:Vsx2 "visual system homeobox 2" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0043010 "camera-type eye
development" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IMP] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:88401 GO:GO:0005634
GO:GO:0005737 GO:GO:0008285 GO:GO:0008284 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0045165 GO:GO:0060040 eggNOG:NOG237888 KO:K09336
InterPro:IPR023339 PROSITE:PS51496 HOVERGEN:HBG036251 CTD:338917
OrthoDB:EOG4QVCCV EMBL:L34808 EMBL:BC031869 IPI:IPI00990176
PIR:I49594 RefSeq:NP_031727.1 UniGene:Mm.4405
ProteinModelPortal:Q61412 SMR:Q61412 IntAct:Q61412 STRING:Q61412
PhosphoSite:Q61412 PRIDE:Q61412 Ensembl:ENSMUST00000021665
GeneID:12677 KEGG:mmu:12677 InParanoid:Q61412 ChiTaRS:Vsx2
NextBio:281922 Bgee:Q61412 CleanEx:MM_VSX2 Genevestigator:Q61412
GermOnline:ENSMUSG00000021239 Uniprot:Q61412
Length = 361
Score = 145 (56.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF ++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK ++ SV
Sbjct: 159 QLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRS---SV 215
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 216 MAEYGLYGAMVRHSIP 231
Score = 38 (18.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 97 TEDEWYNKSLSALRMNSSHHS 117
+++E S++ALR + HS
Sbjct: 297 SQEELRENSIAALRAKAQEHS 317
>UNIPROTKB|O75364 [details] [associations]
symbol:PITX3 "Pituitary homeobox 3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0048666 "neuron development" evidence=IEA] [GO:0070306 "lens
fiber cell differentiation" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0071542 "dopaminergic neuron
differentiation" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0030901 "midbrain
development" evidence=ISS] [GO:0002088 "lens development in
camera-type eye" evidence=ISS] [GO:0002089 "lens morphogenesis in
camera-type eye" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0071542 GO:GO:0043565
GO:GO:0007626 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 Orphanet:98993 GO:GO:0002089
MIM:604219 GO:GO:0070306 EMBL:AL160011 MIM:107250 Orphanet:88632
eggNOG:NOG249113 HOGENOM:HOG000273886 HOVERGEN:HBG068770 CTD:5309
KO:K09357 EMBL:AF041339 EMBL:BC011642 IPI:IPI00025313
RefSeq:NP_005020.1 UniGene:Hs.137568 ProteinModelPortal:O75364
SMR:O75364 STRING:O75364 PhosphoSite:O75364 PRIDE:O75364 DNASU:5309
Ensembl:ENST00000370002 Ensembl:ENST00000539804 GeneID:5309
KEGG:hsa:5309 UCSC:uc001kuu.1 GeneCards:GC10M103979 HGNC:HGNC:9006
HPA:HPA044639 MIM:602669 MIM:610623 neXtProt:NX_O75364 Orphanet:162
PharmGKB:PA33340 InParanoid:O75364 OMA:LCKGGFA OrthoDB:EOG45QHG0
PhylomeDB:O75364 GenomeRNAi:5309 NextBio:20526 Bgee:O75364
CleanEx:HS_PITX3 CleanEx:HS_PTX3 Genevestigator:O75364
GermOnline:ENSG00000107859 Uniprot:O75364
Length = 302
Score = 136 (52.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L
Sbjct: 72 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQAELCKG 131
Query: 54 VIPTCNGAMM---RNIYPTTSRGYQP 76
G ++ +YP S G P
Sbjct: 132 SFAAPLGGLVPPYEEVYPGYSYGNWP 157
Score = 44 (20.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 103 NKSLSALRMNSSHHSNLATP 122
N SL++LR+ + H++ + P
Sbjct: 261 NSSLASLRLKAKQHASFSYP 280
>UNIPROTKB|Q9IAL1 [details] [associations]
symbol:VSX2 "Visual system homeobox 2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005737
GO:GO:0008285 GO:GO:0005730 GO:GO:0008284 GO:GO:0007601
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0050896 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
GO:GO:0045165 eggNOG:NOG237888 HOGENOM:HOG000115909 KO:K09336
InterPro:IPR023339 PROSITE:PS51496 HOVERGEN:HBG036251 EMBL:AF178671
IPI:IPI00600652 RefSeq:NP_990099.1 UniGene:Gga.289
ProteinModelPortal:Q9IAL1 SMR:Q9IAL1 Ensembl:ENSGALT00000016606
GeneID:395536 KEGG:gga:395536 CTD:338917 InParanoid:Q9IAL1
OMA:FSKPEYQ OrthoDB:EOG4QVCCV NextBio:20815613 Uniprot:Q9IAL1
Length = 377
Score = 145 (56.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF ++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK ++ SV
Sbjct: 178 QLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRS---SV 234
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 235 MAEYGLYGAMVRHSIP 250
Score = 38 (18.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 97 TEDEWYNKSLSALRMNSSHHS 117
+++E S++ALR + HS
Sbjct: 316 SQEELRENSIAALRAKAQEHS 336
>UNIPROTKB|G3V7K0 [details] [associations]
symbol:Vsx2 "Ceh-10 homeo domain containing homolog (C.
elegans), isoform CRA_b" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0060040 "retinal bipolar neuron
differentiation" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 EMBL:CH473982 InterPro:IPR023339
PROSITE:PS51496 OMA:FSKPEYQ UniGene:Rn.214211
Ensembl:ENSRNOT00000015889 Uniprot:G3V7K0
Length = 380
Score = 145 (56.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF ++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK ++ SV
Sbjct: 159 QLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRS---SV 215
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 216 MAEYGLYGAMVRHSIP 231
Score = 38 (18.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 97 TEDEWYNKSLSALRMNSSHHS 117
+++E S++ALR + HS
Sbjct: 316 SQEELRENSIAALRAKAQEHS 336
>UNIPROTKB|Q99697 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001569 "patterning
of blood vessels" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002074 "extraocular skeletal muscle development" evidence=IEA]
[GO:0003171 "atrioventricular valve development" evidence=IEA]
[GO:0003350 "pulmonary myocardium development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007520 "myoblast fusion"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0021763 "subthalamic
nucleus development" evidence=IEA] [GO:0021855 "hypothalamus cell
migration" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031076 "embryonic camera-type eye development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0033189 "response to vitamin A" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=IEA] [GO:0060412 "ventricular
septum morphogenesis" evidence=IEA] [GO:0060460 "left lung
morphogenesis" evidence=IEA] [GO:0060577 "pulmonary vein
morphogenesis" evidence=IEA] [GO:0060578 "superior vena cava
morphogenesis" evidence=IEA] [GO:0061031 "endodermal digestive
tract morphogenesis" evidence=IEA] [GO:2000288 "positive regulation
of myoblast proliferation" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007368
"determination of left/right symmetry" evidence=ISS] [GO:0001102
"RNA polymerase II activating transcription factor binding"
evidence=IPI] [GO:0048536 "spleen development" evidence=ISS]
[GO:0070986 "left/right axis specification" evidence=ISS]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0061072
"iris morphogenesis" evidence=IMP] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001105 "RNA polymerase
II transcription coactivator activity" evidence=IDA] [GO:0060127
"prolactin secreting cell differentiation" evidence=TAS]
[GO:0060126 "somatotropin secreting cell differentiation"
evidence=TAS] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0042476 "odontogenesis" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0043021 "ribonucleoprotein complex
binding" evidence=IC] [GO:0051219 "phosphoprotein binding"
evidence=IPI] [GO:0061325 "cell proliferation involved in outflow
tract morphogenesis" evidence=ISS] [GO:0035993 "deltoid tuberosity
development" evidence=IMP] [GO:0003253 "cardiac neural crest cell
migration involved in outflow tract morphogenesis" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IDA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IPI]
[GO:0035315 "hair cell differentiation" evidence=IC]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0001764 GO:GO:0016055 GO:GO:0001078 GO:GO:0001701
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0030334 GO:GO:0000981
GO:GO:0007368 GO:GO:0001569 GO:GO:0007520 GO:GO:0048536
EMBL:CH471057 GO:GO:0001570 GO:GO:0035116 GO:GO:0070986
GO:GO:0031076 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GO:GO:0042476 GO:GO:0001105 GO:GO:0043021
GO:GO:0031490 GO:GO:0055015 GO:GO:0001191 GO:GO:0055009
GO:GO:0035993 GO:GO:0043388 GO:GO:0002074 GO:GO:0060460
GO:GO:0060412 MIM:604229 Orphanet:708 GO:GO:0035315 GO:GO:0048557
GO:GO:0061031 GO:GO:0021855 Orphanet:98978 Orphanet:782
Orphanet:91483 GO:GO:0003253 GO:GO:0061325 GO:GO:0003171
GO:GO:0061072 GO:GO:2000288 GO:GO:0003350 eggNOG:NOG249113
HOVERGEN:HBG068770 CTD:5308 KO:K04686 OMA:DMYPSYT EMBL:U69961
EMBL:AF048720 EMBL:AF048721 EMBL:AF048722 EMBL:AF238048
EMBL:AK127829 EMBL:AK313987 EMBL:BC013998 EMBL:BC106010
IPI:IPI00017093 IPI:IPI00220801 IPI:IPI00220802 RefSeq:NP_000316.2
RefSeq:NP_001191326.1 RefSeq:NP_001191327.1 RefSeq:NP_001191328.1
RefSeq:NP_700475.1 RefSeq:NP_700476.1 UniGene:Hs.643588
UniGene:Hs.738484 PDB:2L7F PDB:2L7M PDB:2LKX PDBsum:2L7F
PDBsum:2L7M PDBsum:2LKX ProteinModelPortal:Q99697 SMR:Q99697
IntAct:Q99697 STRING:Q99697 DMDM:6174907 PRIDE:Q99697 DNASU:5308
Ensembl:ENST00000306732 Ensembl:ENST00000354925
Ensembl:ENST00000355080 Ensembl:ENST00000394598 GeneID:5308
KEGG:hsa:5308 UCSC:uc003iac.3 UCSC:uc003iad.3 UCSC:uc003iae.3
GeneCards:GC04M111538 HGNC:HGNC:9005 MIM:137600 MIM:180500
MIM:180550 MIM:601542 neXtProt:NX_Q99697 Orphanet:91481
PharmGKB:PA33339 OrthoDB:EOG4W9J4N ChiTaRS:PITX2
EvolutionaryTrace:Q99697 GenomeRNAi:5308 NextBio:20518
ArrayExpress:Q99697 Bgee:Q99697 CleanEx:HS_PITX2
Genevestigator:Q99697 GermOnline:ENSG00000164093 GO:GO:0060127
GO:GO:0060577 GO:GO:0060126 GO:GO:0021763 GO:GO:0060578
GO:GO:0035886 Uniprot:Q99697
Length = 317
Score = 137 (53.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 95 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKN 154
Query: 54 VI-PTCNGAMMR--NIYP 68
P NG M ++YP
Sbjct: 155 GFGPQFNGLMQPYDDMYP 172
Score = 43 (20.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ + HS+ +Q
Sbjct: 278 NSSLASLRLKAKQHSSFGYASVQ 300
>MGI|MGI:109340 [details] [associations]
symbol:Pitx2 "paired-like homeodomain transcription factor 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=ISO] [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=ISO]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=ISO] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=ISO]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=ISO] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002074 "extraocular skeletal muscle development"
evidence=IMP] [GO:0003171 "atrioventricular valve development"
evidence=IMP] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IMP] [GO:0003350
"pulmonary myocardium development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=IMP] [GO:0007507 "heart development"
evidence=IGI;IMP] [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0007520 "myoblast fusion" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IDA] [GO:0021763 "subthalamic
nucleus development" evidence=IMP] [GO:0021855 "hypothalamus cell
migration" evidence=IMP] [GO:0021983 "pituitary gland development"
evidence=IMP] [GO:0030324 "lung development" evidence=IMP]
[GO:0030334 "regulation of cell migration" evidence=IMP]
[GO:0031076 "embryonic camera-type eye development" evidence=IMP]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IGI] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=IMP]
[GO:0035993 "deltoid tuberosity development" evidence=ISO;IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0042476 "odontogenesis" evidence=ISO;IMP] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043010 "camera-type
eye development" evidence=ISO] [GO:0043388 "positive regulation of
DNA binding" evidence=IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0051219 "phosphoprotein binding" evidence=ISO] [GO:0055007
"cardiac muscle cell differentiation" evidence=IMP] [GO:0055009
"atrial cardiac muscle tissue morphogenesis" evidence=IMP]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IMP] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0060412 "ventricular septum morphogenesis"
evidence=IMP] [GO:0060460 "left lung morphogenesis" evidence=IMP]
[GO:0060577 "pulmonary vein morphogenesis" evidence=IMP]
[GO:0060578 "superior vena cava morphogenesis" evidence=IMP]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=IMP] [GO:0061072 "iris morphogenesis" evidence=ISO]
[GO:0061325 "cell proliferation involved in outflow tract
morphogenesis" evidence=IMP] [GO:0070986 "left/right axis
specification" evidence=IMP] [GO:2000288 "positive regulation of
myoblast proliferation" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:109340 GO:GO:0005634 GO:GO:0005737
GO:GO:0001764 GO:GO:0016055 GO:GO:0001078 GO:GO:0043565
GO:GO:0001701 GO:GO:0045944 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0030334 GO:GO:0000981 GO:GO:0007368
GO:GO:0001569 GO:GO:0007520 GO:GO:0048536 GO:GO:0001570
GO:GO:0035116 GO:GO:0070986 GO:GO:0031076 GO:GO:0021983
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GO:GO:0042476 GO:GO:0001105 GO:GO:0031490 GO:GO:0055015
GO:GO:0001191 GO:GO:0055009 GO:GO:0035993 GO:GO:0043388
GO:GO:0002074 GO:GO:0060460 GO:GO:0060412 GO:GO:0048557
GO:GO:0061031 GO:GO:0021855 GO:GO:0003253 GO:GO:0061325
GO:GO:0003171 GO:GO:0061072 GO:GO:2000288 GO:GO:0003350
eggNOG:NOG249113 HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438
CTD:5308 KO:K04686 OMA:DMYPSYT OrthoDB:EOG4W9J4N GO:GO:0060577
GO:GO:0021763 GO:GO:0060578 GO:GO:0035886 EMBL:U80036 EMBL:U80010
EMBL:U80011 EMBL:AB006320 EMBL:AB006321 EMBL:AF048723 EMBL:AF048724
EMBL:AJ243597 EMBL:AF201091 EMBL:U70132 IPI:IPI00125578
IPI:IPI00230555 IPI:IPI00230556 IPI:IPI00885427 IPI:IPI00885862
RefSeq:NP_001035967.1 RefSeq:NP_001035969.1 RefSeq:NP_035228.2
UniGene:Mm.246804 ProteinModelPortal:P97474 SMR:P97474
IntAct:P97474 STRING:P97474 PRIDE:P97474 Ensembl:ENSMUST00000042587
Ensembl:ENSMUST00000106382 Ensembl:ENSMUST00000172645
Ensembl:ENSMUST00000174661 GeneID:18741 KEGG:mmu:18741
UCSC:uc008rhu.1 UCSC:uc008rhv.1 NextBio:294885 Bgee:P97474
CleanEx:MM_PITX2 Genevestigator:P97474
GermOnline:ENSMUSG00000028023 Uniprot:P97474
Length = 317
Score = 137 (53.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 95 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKN 154
Query: 54 VI-PTCNGAMMR--NIYP 68
P NG M ++YP
Sbjct: 155 GFGPQFNGLMQPYDDMYP 172
Score = 43 (20.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ + HS+ +Q
Sbjct: 278 NSSLASLRLKAKQHSSFGYASVQ 300
>UNIPROTKB|F1S8T0 [details] [associations]
symbol:PITX3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0070306
"lens fiber cell differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0002089 "lens morphogenesis in camera-type eye"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0071542
GO:GO:0043565 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0002089 GO:GO:0070306
GeneTree:ENSGT00700000104438 OMA:LCKGGFA EMBL:CU407032
Ensembl:ENSSSCT00000011571 Uniprot:F1S8T0
Length = 299
Score = 135 (52.6 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L
Sbjct: 72 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQAELCKG 131
Query: 54 VIPTCNGAMM---RNIYPTTSRGYQP 76
G ++ +YP S G P
Sbjct: 132 GFAAPLGGLVPPYEEVYPGYSYGNWP 157
Score = 44 (20.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 103 NKSLSALRMNSSHHSNLATP 122
N SL++LR+ + H++ + P
Sbjct: 258 NSSLASLRLKAKQHASFSYP 277
>UNIPROTKB|E1BBR5 [details] [associations]
symbol:PITX3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0070306
"lens fiber cell differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0002089 "lens morphogenesis in camera-type eye"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0071542
GO:GO:0043565 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0002089 GO:GO:0070306
GeneTree:ENSGT00700000104438 CTD:5309 KO:K09357 OMA:LCKGGFA
EMBL:DAAA02058999 IPI:IPI00714094 RefSeq:NP_001179234.1
UniGene:Bt.74425 PRIDE:E1BBR5 Ensembl:ENSBTAT00000020847
GeneID:512000 KEGG:bta:512000 NextBio:20870203 Uniprot:E1BBR5
Length = 302
Score = 135 (52.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L
Sbjct: 72 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQAELCKG 131
Query: 54 VIPTCNGAMM---RNIYPTTSRGYQP 76
G ++ +YP S G P
Sbjct: 132 GFAAPLGGLVPPYEEVYPGYSYGNWP 157
Score = 44 (20.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 103 NKSLSALRMNSSHHSNLATP 122
N SL++LR+ + H++ + P
Sbjct: 261 NSSLASLRLKAKQHASFSYP 280
>MGI|MGI:1100498 [details] [associations]
symbol:Pitx3 "paired-like homeodomain transcription factor
3" species:10090 "Mus musculus" [GO:0002088 "lens development in
camera-type eye" evidence=IMP] [GO:0002089 "lens morphogenesis in
camera-type eye" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0010468 "regulation of gene expression"
evidence=IDA] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048666 "neuron development" evidence=IMP]
[GO:0070306 "lens fiber cell differentiation" evidence=IMP]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IDA;IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1100498 GO:GO:0005634
GO:GO:0045893 GO:GO:0071542 GO:GO:0043565 GO:GO:0007626
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0048666 GO:GO:0030901 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0002089 GO:GO:0070306 eggNOG:NOG249113
HOGENOM:HOG000273886 HOVERGEN:HBG068770
GeneTree:ENSGT00700000104438 CTD:5309 KO:K09357 OMA:LCKGGFA
OrthoDB:EOG45QHG0 EMBL:AF005772 EMBL:BC120844 EMBL:BC137810
IPI:IPI00127700 RefSeq:NP_032878.1 UniGene:Mm.6255
ProteinModelPortal:O35160 SMR:O35160 STRING:O35160
PhosphoSite:O35160 PRIDE:O35160 Ensembl:ENSMUST00000026259
GeneID:18742 KEGG:mmu:18742 UCSC:uc008hsl.1 InParanoid:Q0VB03
ChiTaRS:PITX3 NextBio:294893 Bgee:O35160 CleanEx:MM_PITX3
Genevestigator:O35160 GermOnline:ENSMUSG00000025229 Uniprot:O35160
Length = 302
Score = 135 (52.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L
Sbjct: 72 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQAELCKG 131
Query: 54 VIPTCNGAMM---RNIYPTTSRGYQP 76
G ++ +YP S G P
Sbjct: 132 GFAAPLGGLVPPYEEVYPGYSYGNWP 157
Score = 44 (20.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 103 NKSLSALRMNSSHHSNLATP 122
N SL++LR+ + H++ + P
Sbjct: 261 NSSLASLRLKAKQHASFSYP 280
>RGD|3331 [details] [associations]
symbol:Pitx2 "paired-like homeodomain 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISO]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IDA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=ISO] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0001102 "RNA polymerase II activating transcription
factor binding" evidence=ISO] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001191 "RNA
polymerase II transcription factor binding transcription factor
activity involved in negative regulation of transcription"
evidence=ISO] [GO:0001569 "patterning of blood vessels" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001764 "neuron migration"
evidence=ISO] [GO:0002074 "extraocular skeletal muscle development"
evidence=ISO] [GO:0003171 "atrioventricular valve development"
evidence=ISO] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=ISO] [GO:0003350
"pulmonary myocardium development" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=ISO] [GO:0007420 "brain development" evidence=IEP]
[GO:0007507 "heart development" evidence=ISO] [GO:0007519 "skeletal
muscle tissue development" evidence=ISO] [GO:0007520 "myoblast
fusion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008584 "male gonad development" evidence=IEP]
[GO:0008585 "female gonad development" evidence=IEP] [GO:0009653
"anatomical structure morphogenesis" evidence=ISO] [GO:0009725
"response to hormone stimulus" evidence=IEP] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=ISO] [GO:0021763 "subthalamic nucleus development"
evidence=ISO] [GO:0021855 "hypothalamus cell migration" evidence=ISO]
[GO:0021983 "pituitary gland development" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=IEP] [GO:0030324 "lung development"
evidence=ISO] [GO:0030334 "regulation of cell migration"
evidence=ISO] [GO:0031076 "embryonic camera-type eye development"
evidence=ISO] [GO:0031490 "chromatin DNA binding" evidence=ISO]
[GO:0033189 "response to vitamin A" evidence=IEP] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=ISO] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=ISO]
[GO:0035993 "deltoid tuberosity development" evidence=ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEP]
[GO:0042476 "odontogenesis" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043010 "camera-type eye
development" evidence=ISO] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048536 "spleen development" evidence=ISO] [GO:0048557 "embryonic
digestive tract morphogenesis" evidence=ISO] [GO:0048738 "cardiac
muscle tissue development" evidence=ISO] [GO:0051219 "phosphoprotein
binding" evidence=ISO] [GO:0055007 "cardiac muscle cell
differentiation" evidence=ISO] [GO:0055009 "atrial cardiac muscle
tissue morphogenesis" evidence=ISO] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=ISO] [GO:0055123 "digestive system
development" evidence=ISO] [GO:0060412 "ventricular septum
morphogenesis" evidence=ISO] [GO:0060460 "left lung morphogenesis"
evidence=ISO] [GO:0060577 "pulmonary vein morphogenesis"
evidence=ISO] [GO:0060578 "superior vena cava morphogenesis"
evidence=ISO] [GO:0061031 "endodermal digestive tract morphogenesis"
evidence=ISO] [GO:0061072 "iris morphogenesis" evidence=ISO]
[GO:0061325 "cell proliferation involved in outflow tract
morphogenesis" evidence=ISO] [GO:0070986 "left/right axis
specification" evidence=ISO] [GO:2000288 "positive regulation of
myoblast proliferation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:3331 GO:GO:0005634 GO:GO:0005737 GO:GO:0001764 GO:GO:0007420
GO:GO:0016055 GO:GO:0030182 GO:GO:0008585 GO:GO:0001078 GO:GO:0001701
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0008584
GO:GO:0000978 GO:GO:0001077 GO:GO:0030334 GO:GO:0009725 GO:GO:0007368
GO:GO:0001569 GO:GO:0007520 GO:GO:0001570 GO:GO:0042475 GO:GO:0035116
GO:GO:0031076 GO:GO:0021983 GO:GO:0033189 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0001105 GO:GO:0031490
GO:GO:0055015 GO:GO:0001191 GO:GO:0055009 GO:GO:0035993 GO:GO:0043388
GO:GO:0002074 GO:GO:0060460 GO:GO:0060412 GO:GO:0048557 GO:GO:0061031
GO:GO:0021855 GO:GO:0003253 GO:GO:0061325 GO:GO:0003171 GO:GO:0061072
GO:GO:2000288 GO:GO:0003350 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686
OMA:DMYPSYT GO:GO:0060577 GO:GO:0021763 GO:GO:0060578 GO:GO:0035886
EMBL:AF039832 EMBL:AJ222971 EMBL:AJ222972 IPI:IPI00206778
IPI:IPI00231533 RefSeq:NP_001035970.1 RefSeq:NP_062207.1
UniGene:Rn.17591 ProteinModelPortal:Q9R0W1 SMR:Q9R0W1 STRING:Q9R0W1
PRIDE:Q9R0W1 Ensembl:ENSRNOT00000014368 Ensembl:ENSRNOT00000044232
GeneID:54284 KEGG:rno:54284 UCSC:RGD:3331 InParanoid:Q9R0W1
NextBio:610866 ArrayExpress:Q9R0W1 Genevestigator:Q9R0W1
GermOnline:ENSRNOG00000010681 Uniprot:Q9R0W1
Length = 324
Score = 137 (53.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 102 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKN 161
Query: 54 VI-PTCNGAMMR--NIYP 68
P NG M ++YP
Sbjct: 162 GFGPQFNGLMQPYDDMYP 179
Score = 43 (20.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ + HS+ +Q
Sbjct: 285 NSSLASLRLKAKQHSSFGYASVQ 307
>UNIPROTKB|A5D7J4 [details] [associations]
symbol:PITX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003350 "pulmonary myocardium development"
evidence=IEA] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IEA] [GO:0003171
"atrioventricular valve development" evidence=IEA] [GO:0002074
"extraocular skeletal muscle development" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001078 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in negative regulation of transcription"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:2000288 "positive
regulation of myoblast proliferation" evidence=IEA] [GO:0070986
"left/right axis specification" evidence=IEA] [GO:0061325 "cell
proliferation involved in outflow tract morphogenesis"
evidence=IEA] [GO:0061072 "iris morphogenesis" evidence=IEA]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=IEA] [GO:0060578 "superior vena cava morphogenesis"
evidence=IEA] [GO:0060577 "pulmonary vein morphogenesis"
evidence=IEA] [GO:0060460 "left lung morphogenesis" evidence=IEA]
[GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IEA] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0051219 "phosphoprotein binding"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042476 "odontogenesis" evidence=IEA] [GO:0035993 "deltoid
tuberosity development" evidence=IEA] [GO:0035886 "vascular smooth
muscle cell differentiation" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0031076 "embryonic camera-type eye
development" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0021855 "hypothalamus cell migration"
evidence=IEA] [GO:0021763 "subthalamic nucleus development"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0007520 "myoblast fusion" evidence=IEA]
[GO:0007368 "determination of left/right symmetry" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0001764 GO:GO:0016055 GO:GO:0001078
GO:GO:0001701 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0030334 GO:GO:0007368 GO:GO:0001569 GO:GO:0007520
GO:GO:0001570 GO:GO:0035116 GO:GO:0031076 GO:GO:0021983
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GO:GO:0042476 GO:GO:0001105 GO:GO:0031490 GO:GO:0055015
GO:GO:0001191 GO:GO:0055009 GO:GO:0035993 GO:GO:0043388
GO:GO:0002074 GO:GO:0060460 GO:GO:0060412 GO:GO:0048557
GO:GO:0061031 GO:GO:0021855 GO:GO:0003253 GO:GO:0061325
GO:GO:0003171 GO:GO:0061072 GO:GO:2000288 GO:GO:0003350
eggNOG:NOG249113 HOGENOM:HOG000273886 HOVERGEN:HBG068770
GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686 OMA:DMYPSYT
OrthoDB:EOG4W9J4N GO:GO:0060577 GO:GO:0021763 GO:GO:0060578
GO:GO:0035886 EMBL:DAAA02016521 EMBL:BC140579 IPI:IPI00700494
RefSeq:NP_001091460.1 UniGene:Bt.18496 SMR:A5D7J4 STRING:A5D7J4
Ensembl:ENSBTAT00000011939 GeneID:506721 KEGG:bta:506721
InParanoid:A5D7J4 NextBio:20867727 Uniprot:A5D7J4
Length = 325
Score = 137 (53.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 103 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKN 162
Query: 54 VI-PTCNGAMMR--NIYP 68
P NG M ++YP
Sbjct: 163 GFGPQFNGLMQPYDDMYP 180
Score = 43 (20.2 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ + HS+ +Q
Sbjct: 286 NSSLASLRLKAKQHSSFGYASVQ 308
>UNIPROTKB|E2R5R2 [details] [associations]
symbol:PITX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686
OMA:DMYPSYT EMBL:AAEX03016824 RefSeq:XP_851370.1
ProteinModelPortal:E2R5R2 Ensembl:ENSCAFT00000018452 GeneID:487902
KEGG:cfa:487902 NextBio:20861384 Uniprot:E2R5R2
Length = 325
Score = 137 (53.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 103 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKN 162
Query: 54 VI-PTCNGAMMR--NIYP 68
P NG M ++YP
Sbjct: 163 GFGPQFNGLMQPYDDMYP 180
Score = 43 (20.2 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ + HS+ +Q
Sbjct: 286 NSSLASLRLKAKQHSSFGYASVQ 308
>UNIPROTKB|F1S139 [details] [associations]
symbol:PITX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000288 "positive regulation of myoblast proliferation"
evidence=IEA] [GO:0070986 "left/right axis specification"
evidence=IEA] [GO:0061325 "cell proliferation involved in outflow
tract morphogenesis" evidence=IEA] [GO:0061072 "iris morphogenesis"
evidence=IEA] [GO:0061031 "endodermal digestive tract
morphogenesis" evidence=IEA] [GO:0060578 "superior vena cava
morphogenesis" evidence=IEA] [GO:0060577 "pulmonary vein
morphogenesis" evidence=IEA] [GO:0060460 "left lung morphogenesis"
evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0055009 "atrial cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0051219 "phosphoprotein
binding" evidence=IEA] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0035993
"deltoid tuberosity development" evidence=IEA] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0031076
"embryonic camera-type eye development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0021855 "hypothalamus cell
migration" evidence=IEA] [GO:0021763 "subthalamic nucleus
development" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0007520 "myoblast fusion" evidence=IEA]
[GO:0007368 "determination of left/right symmetry" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003350 "pulmonary myocardium
development" evidence=IEA] [GO:0003253 "cardiac neural crest cell
migration involved in outflow tract morphogenesis" evidence=IEA]
[GO:0003171 "atrioventricular valve development" evidence=IEA]
[GO:0002074 "extraocular skeletal muscle development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001078 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in negative regulation of transcription"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0001764 GO:GO:0016055
GO:GO:0001078 GO:GO:0001701 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0030334 GO:GO:0007368 GO:GO:0001569
GO:GO:0007520 GO:GO:0001570 GO:GO:0035116 GO:GO:0031076
GO:GO:0021983 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GO:GO:0042476 GO:GO:0001105 GO:GO:0031490
GO:GO:0055015 GO:GO:0001191 GO:GO:0055009 GO:GO:0035993
GO:GO:0043388 GO:GO:0002074 GO:GO:0060460 GO:GO:0060412
GO:GO:0048557 GO:GO:0061031 GO:GO:0021855 GO:GO:0003253
GO:GO:0061325 GO:GO:0003171 GO:GO:0061072 GO:GO:2000288
GO:GO:0003350 GeneTree:ENSGT00700000104438 OMA:DMYPSYT
GO:GO:0060577 GO:GO:0021763 GO:GO:0060578 GO:GO:0035886
EMBL:CU463881 Ensembl:ENSSSCT00000009999 Uniprot:F1S139
Length = 326
Score = 137 (53.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 104 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKN 163
Query: 54 VI-PTCNGAMMR--NIYP 68
P NG M ++YP
Sbjct: 164 GFGPQFNGLMQPYDDMYP 181
Score = 43 (20.2 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ + HS+ +Q
Sbjct: 287 NSSLASLRLKAKQHSSFGYASVQ 309
>UNIPROTKB|O93385 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IEA] [GO:0001569
"patterning of blood vessels" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002074 "extraocular skeletal muscle development"
evidence=IEA] [GO:0003171 "atrioventricular valve development"
evidence=IEA] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IEA] [GO:0003350
"pulmonary myocardium development" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007520 "myoblast fusion"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0021763 "subthalamic nucleus development"
evidence=IEA] [GO:0021855 "hypothalamus cell migration"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031076 "embryonic camera-type eye development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035886 "vascular smooth muscle cell differentiation"
evidence=IEA] [GO:0035993 "deltoid tuberosity development"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0048536
"spleen development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0051219 "phosphoprotein
binding" evidence=IEA] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=IEA] [GO:0060412 "ventricular
septum morphogenesis" evidence=IEA] [GO:0060460 "left lung
morphogenesis" evidence=IEA] [GO:0060577 "pulmonary vein
morphogenesis" evidence=IEA] [GO:0060578 "superior vena cava
morphogenesis" evidence=IEA] [GO:0061031 "endodermal digestive
tract morphogenesis" evidence=IEA] [GO:0061072 "iris morphogenesis"
evidence=IEA] [GO:0061325 "cell proliferation involved in outflow
tract morphogenesis" evidence=IEA] [GO:0070986 "left/right axis
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0061184 "positive regulation of dermatome development"
evidence=IDA] [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IDA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IDA] [GO:2000287 "positive regulation of
myotome development" evidence=IDA] [GO:2000288 "positive regulation
of myoblast proliferation" evidence=IDA] [GO:0007368 "determination
of left/right symmetry" evidence=IEP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0016055 GO:GO:0001078
GO:GO:0045944 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0030334 GO:GO:0030326 GO:GO:0007368 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0001105
GO:GO:0031490 GO:GO:0001191 GO:GO:0045663 GO:GO:0043388
GO:GO:2000288 eggNOG:NOG249113 HOVERGEN:HBG068770 EMBL:AF076640
EMBL:AF077092 EMBL:AF063935 IPI:IPI00573554 IPI:IPI00602044
PIR:JW0097 RefSeq:NP_990341.1 UniGene:Gga.3398
ProteinModelPortal:O93385 SMR:O93385 STRING:O93385 GeneID:395862
KEGG:gga:395862 CTD:5308 KO:K04686 NextBio:20815929 GO:GO:0061184
GO:GO:2000287 Uniprot:O93385
Length = 333
Score = 137 (53.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 111 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKN 170
Query: 54 VI-PTCNGAMMR--NIYP 68
P NG M ++YP
Sbjct: 171 GFGPQFNGLMQPYDDMYP 188
Score = 43 (20.2 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ + HS+ +Q
Sbjct: 294 NSSLASLRLKAKQHSSFGYASVQ 316
>ZFIN|ZDB-GENE-001222-1 [details] [associations]
symbol:vsx2 "visual system homeobox 2" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-001222-1 GO:GO:0007275 GO:GO:0005634
GO:GO:0007601 GO:GO:0043565 GO:GO:0003700 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG237888 HOGENOM:HOG000115909
InterPro:IPR023339 PROSITE:PS51496 HOVERGEN:HBG036251
OrthoDB:EOG4QVCCV EMBL:U62898 EMBL:BC055588 EMBL:BC067664
IPI:IPI00501002 IPI:IPI00506942 UniGene:Dr.75766
ProteinModelPortal:O42477 SMR:O42477 ArrayExpress:O42477
Uniprot:O42477
Length = 393
Score = 145 (56.1 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF ++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK ++ SV
Sbjct: 176 QLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRS---SV 232
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 233 MAEYGLYGAMVRHSIP 248
Score = 37 (18.1 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 97 TEDEWYNKSLSALRMNSSHHS 117
+++E S++ALR + HS
Sbjct: 335 SKEELRENSIAALRAKAQEHS 355
>WB|WBGene00000440 [details] [associations]
symbol:ceh-17 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0030516 "regulation of axon extension" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030516
GeneTree:ENSGT00700000104279 InterPro:IPR022135 Pfam:PF12413
HSSP:P06601 KO:K09330 EMBL:FO080863 EMBL:AF272397 PIR:T30920
RefSeq:NP_491393.1 UniGene:Cel.19455 SMR:G5EC89 IntAct:G5EC89
EnsemblMetazoa:D1007.1 GeneID:172059 KEGG:cel:CELE_D1007.1
CTD:172059 WormBase:D1007.1 OMA:CETHYPD NextBio:873845
Uniprot:G5EC89
Length = 237
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE +F ++HYPDIY REE+A+ QVWFQNRRAKYRKQEK
Sbjct: 160 QLKELERSFCETHYPDIYTREEIAMRIDLTEARVQVWFQNRRAKYRKQEK 209
>UNIPROTKB|G5EC89 [details] [associations]
symbol:ceh-17 "CEH-17" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030516
GeneTree:ENSGT00700000104279 InterPro:IPR022135 Pfam:PF12413
HSSP:P06601 KO:K09330 EMBL:FO080863 EMBL:AF272397 PIR:T30920
RefSeq:NP_491393.1 UniGene:Cel.19455 SMR:G5EC89 IntAct:G5EC89
EnsemblMetazoa:D1007.1 GeneID:172059 KEGG:cel:CELE_D1007.1
CTD:172059 WormBase:D1007.1 OMA:CETHYPD NextBio:873845
Uniprot:G5EC89
Length = 237
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE +F ++HYPDIY REE+A+ QVWFQNRRAKYRKQEK
Sbjct: 160 QLKELERSFCETHYPDIYTREEIAMRIDLTEARVQVWFQNRRAKYRKQEK 209
>UNIPROTKB|J9P9T1 [details] [associations]
symbol:PITX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104438
OMA:LCKGGFA EMBL:AAEX03015485 Ensembl:ENSCAFT00000043429
Uniprot:J9P9T1
Length = 302
Score = 133 (51.9 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 34/86 (39%), Positives = 48/86 (55%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAI---LFQ----VWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ L + VWF+NRRAK+RK+E+ Q L
Sbjct: 72 QQLQELEAPFQRNRYPDMSTREEIAVWTNLTEARVGVWFKNRRAKWRKRERSQQAELCKG 131
Query: 54 VIPTCNGAMM---RNIYPTTSRGYQP 76
G ++ +YP S G P
Sbjct: 132 GFAAPLGGLVPPYEEVYPGYSYGNWP 157
Score = 44 (20.5 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 103 NKSLSALRMNSSHHSNLATP 122
N SL++LR+ + H++ + P
Sbjct: 261 NSSLASLRLKAKQHASFSYP 280
>UNIPROTKB|H0YAD2 [details] [associations]
symbol:PHOX2B "Paired mesoderm homeobox protein 2B"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC105389 HGNC:HGNC:9143
Ensembl:ENST00000510424 Uniprot:H0YAD2
Length = 180
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 49 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 98
>UNIPROTKB|P58304 [details] [associations]
symbol:VSX2 "Visual system homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0060040 "retinal bipolar neuron differentiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0008285
GO:GO:0005730 EMBL:CH471061 GO:GO:0008284 GO:GO:0007601
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0050896 Orphanet:98938 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0045165
GO:GO:0060040 Orphanet:2543 Orphanet:2542 eggNOG:NOG237888
HOGENOM:HOG000115909 KO:K09336 InterPro:IPR023339 PROSITE:PS51496
HOVERGEN:HBG036251 CTD:338917 OMA:FSKPEYQ OrthoDB:EOG4QVCCV
EMBL:AY336059 EMBL:AC005519 EMBL:AC006349 EMBL:BC128153
IPI:IPI00033487 RefSeq:NP_878314.1 UniGene:Hs.449771
ProteinModelPortal:P58304 SMR:P58304 IntAct:P58304 STRING:P58304
PhosphoSite:P58304 DMDM:17374365 PaxDb:P58304 PRIDE:P58304
Ensembl:ENST00000261980 GeneID:338917 KEGG:hsa:338917
UCSC:uc001xpq.3 GeneCards:GC14P074706 HGNC:HGNC:1975 HPA:HPA003436
MIM:142993 MIM:610092 MIM:610093 neXtProt:NX_P58304
PharmGKB:PA26511 InParanoid:P58304 PhylomeDB:P58304
GenomeRNAi:338917 NextBio:97195 Bgee:P58304 CleanEx:HS_VSX2
Genevestigator:P58304 Uniprot:P58304
Length = 361
Score = 145 (56.1 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF ++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK ++ SV
Sbjct: 159 QLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRS---SV 215
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 216 MAEYGLYGAMVRHSIP 231
Score = 34 (17.0 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 97 TEDEWYNKSLSALRMNSSHHS 117
+++E S++ LR + HS
Sbjct: 297 SQEELRENSIAVLRAKAQEHS 317
>UNIPROTKB|I3LRI8 [details] [associations]
symbol:I3LRI8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0046622 "positive
regulation of organ growth" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0021853 "cerebral cortex
GABAergic interneuron migration" evidence=IEA] [GO:0021846 "cell
proliferation in forebrain" evidence=IEA] [GO:0021831 "embryonic
olfactory bulb interneuron precursor migration" evidence=IEA]
[GO:0021800 "cerebral cortex tangential migration" evidence=IEA]
[GO:0021759 "globus pallidus development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0046622 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:VTHPEER GO:GO:0021846 GO:GO:0021853 GO:GO:0021800 GO:GO:0021831
GO:GO:0021759 EMBL:FP339588 Ensembl:ENSSSCT00000032103
Uniprot:I3LRI8
Length = 451
Score = 149 (57.5 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE AF K+HYPD++ REELA+ QVWFQNRRAK+RK+EK
Sbjct: 228 QLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 277
Score = 33 (16.7 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 105 SLSALRMNSSHHSNLATPM 123
S++ALR+ + H+ T +
Sbjct: 420 SIAALRLKAKEHAAQLTQL 438
>RGD|69253 [details] [associations]
symbol:Pitx1 "paired-like homeodomain 1" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA;ISO] [GO:0001501 "skeletal system
development" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:0005634
"nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IMP] [GO:0014707
"branchiomeric skeletal muscle development" evidence=IEA;ISO]
[GO:0021983 "pituitary gland development" evidence=IEA;ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA;ISO]
[GO:0035137 "hindlimb morphogenesis" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048625 "myoblast cell fate commitment"
evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:69253
GO:GO:0005737 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0051216 GO:GO:0035116 GO:GO:0021983
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988
GO:GO:0048625 GO:GO:0014707 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 OrthoDB:EOG4R503Q CTD:5307 KO:K09356 OMA:CKNSYLP
EMBL:AB047298 EMBL:BC061966 IPI:IPI00198722 RefSeq:NP_446076.1
UniGene:Rn.74248 ProteinModelPortal:Q99NA7 SMR:Q99NA7 STRING:Q99NA7
Ensembl:ENSRNOT00000015307 GeneID:113983 KEGG:rno:113983
UCSC:RGD:69253 GeneTree:ENSGT00700000104438 InParanoid:Q99NA7
NextBio:618121 Genevestigator:Q99NA7 GermOnline:ENSRNOG00000011423
Uniprot:Q99NA7
Length = 315
Score = 131 (51.2 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L
Sbjct: 99 QQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCKG 158
Query: 54 -VIPTCNGAMM--RNIYPTTSRGY 74
+P +G + ++Y Y
Sbjct: 159 GYVPQFSGLVQPYEDVYAAAGYSY 182
Score = 46 (21.3 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ S HS+ LQ
Sbjct: 280 NSSLASLRLKSKQHSSFGYGGLQ 302
>RGD|3332 [details] [associations]
symbol:Pitx3 "paired-like homeodomain 3" species:10116 "Rattus
norvegicus" [GO:0002088 "lens development in camera-type eye"
evidence=ISO;ISS] [GO:0002089 "lens morphogenesis in camera-type eye"
evidence=ISO;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0007626 "locomotory behavior"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0030901 "midbrain development" evidence=ISO;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0048666 "neuron development" evidence=IEA;ISO]
[GO:0070306 "lens fiber cell differentiation" evidence=IEA;ISO]
[GO:0071542 "dopaminergic neuron differentiation" evidence=ISO;ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3332 GO:GO:0005634 GO:GO:0045893
GO:GO:0071542 GO:GO:0043565 GO:GO:0007626 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0002089
GO:GO:0070306 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 CTD:5309 KO:K09357
OMA:LCKGGFA OrthoDB:EOG45QHG0 EMBL:AJ011005 IPI:IPI00197341
RefSeq:NP_062120.1 UniGene:Rn.22092 ProteinModelPortal:P81062
SMR:P81062 STRING:P81062 PhosphoSite:P81062
Ensembl:ENSRNOT00000026013 GeneID:29609 KEGG:rno:29609 UCSC:RGD:3332
InParanoid:P81062 NextBio:609786 Genevestigator:P81062
GermOnline:ENSRNOG00000019194 Uniprot:P81062
Length = 302
Score = 132 (51.5 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 32/86 (37%), Positives = 47/86 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L
Sbjct: 72 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQAELCKG 131
Query: 54 VIPTCNGAMM---RNIYPTTSRGYQP 76
G ++ +YP + G P
Sbjct: 132 GFAAPLGGLVPPYEEVYPGYTYGNWP 157
Score = 44 (20.5 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 103 NKSLSALRMNSSHHSNLATP 122
N SL++LR+ + H++ + P
Sbjct: 261 NSSLASLRLKAKQHASFSYP 280
>FB|FBgn0020617 [details] [associations]
symbol:Rx "Retinal Homeobox" species:7227 "Drosophila
melanogaster" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0007420
"brain development" evidence=NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0022008 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG261733
GeneTree:ENSGT00700000104256 EMBL:AJ223300 EMBL:AY118390
RefSeq:NP_726006.2 UniGene:Dm.3064 ProteinModelPortal:Q9W2Q1
SMR:Q9W2Q1 STRING:Q9W2Q1 EnsemblMetazoa:FBtr0071518 GeneID:37367
KEGG:dme:Dmel_CG10052 CTD:37367 FlyBase:FBgn0020617
InParanoid:Q9W2Q1 OMA:MVEANQL OrthoDB:EOG43BK55 PhylomeDB:Q9W2Q1
GenomeRNAi:37367 NextBio:803298 Bgee:Q9W2Q1 GermOnline:CG10052
Uniprot:Q9W2Q1
Length = 873
Score = 165 (63.1 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 55/139 (39%), Positives = 71/139 (51%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQ--LQKALTP 52
QL ELE AF KSHYPD+Y REELA + QVWFQNRRAK+R+QEK L+ LT
Sbjct: 539 QLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKSESLRLGLTH 598
Query: 53 -SVIPT---CNGAMMRNIYPTTSRGY-QPYP----HPNTINRQHFVILVPGMSTEDEWYN 103
+ +P C GA + P S P HP T+ + L P +S N
Sbjct: 599 FTQLPHRLGC-GASGLPVDPWLSPPLLSALPGFLSHPQTVYPSY---LTPPLSLAPG--N 652
Query: 104 KSLSALRMNSSHHSNLATP 122
++S+L HH++ P
Sbjct: 653 LTMSSLAAMGHHHAHNGPP 671
>ZFIN|ZDB-GENE-060421-3623 [details] [associations]
symbol:pitx1 "paired-like homeodomain
transcription factor 1" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-060421-3623
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG068770 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:CABZ01050114 EMBL:CABZ01050115
EMBL:EU580407 IPI:IPI00632106 UniGene:Dr.93570 STRING:B2LT56
Ensembl:ENSDART00000062803 Uniprot:B2LT56
Length = 285
Score = 155 (59.6 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 49/134 (36%), Positives = 71/134 (52%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTP- 52
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L
Sbjct: 68 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQMDLCKN 127
Query: 53 SVIPTCNGAMMR--NIYPT------TSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNK 104
S +P +G M ++YPT T++G P P +T N F + P S
Sbjct: 128 SYLPQFSGLMQPYDDVYPTYTYNNWTNKGLTPAPL-STKNFTFFNSMSPLTSQSMFSAPS 186
Query: 105 SLSALRMNSSH-HS 117
S+S++ M S HS
Sbjct: 187 SISSMSMASGMGHS 200
>MGI|MGI:106633 [details] [associations]
symbol:Phox2a "paired-like homeobox 2a" species:10090 "Mus
musculus" [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=ISO] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0003357 "noradrenergic neuron differentiation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0021523 "somatic motor neuron differentiation" evidence=IMP]
[GO:0021623 "oculomotor nerve formation" evidence=IMP] [GO:0021642
"trochlear nerve formation" evidence=IMP] [GO:0021703 "locus
ceruleus development" evidence=IMP] [GO:0030901 "midbrain
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0048485 "sympathetic nervous system development" evidence=IMP]
[GO:0048486 "parasympathetic nervous system development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:106633 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0030901 GO:GO:0021623 GO:GO:0048485
GO:GO:0043576 GO:GO:0000977 GO:GO:0021523 GO:GO:0021703
GO:GO:0003357 GeneTree:ENSGT00700000104256 CTD:401 eggNOG:NOG301263
HOGENOM:HOG000013060 HOVERGEN:HBG053590 KO:K09330 OMA:KGPLWAG
OrthoDB:EOG4N30PS EMBL:X75014 IPI:IPI00121059 PIR:I48713
RefSeq:NP_032913.1 UniGene:Mm.5028 ProteinModelPortal:Q62066
SMR:Q62066 STRING:Q62066 PhosphoSite:Q62066 PRIDE:Q62066
Ensembl:ENSMUST00000008090 GeneID:11859 KEGG:mmu:11859
UCSC:uc009ipe.2 InParanoid:Q62066 NextBio:279855 Bgee:Q62066
CleanEx:MM_PHOX2A Genevestigator:Q62066
GermOnline:ENSMUSG00000007946 GO:GO:0021642 Uniprot:Q62066
Length = 280
Score = 154 (59.3 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 101 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 150
>ZFIN|ZDB-GENE-000223-14 [details] [associations]
symbol:phox2a "paired-like homeobox 2a" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007420 "brain development" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000223-14 GO:GO:0005634
GO:GO:0007420 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104256 EMBL:CU633849
IPI:IPI00511129 Ensembl:ENSDART00000002384 Bgee:F1RCT9
Uniprot:F1RCT9
Length = 280
Score = 154 (59.3 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 103 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 152
>WB|WBGene00044330 [details] [associations]
symbol:alr-1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG313402 KO:K09452
GeneTree:ENSGT00700000104279 HSSP:P06601 EMBL:Z68008 PIR:T24046
RefSeq:NP_509860.1 ProteinModelPortal:Q21836 SMR:Q21836
STRING:Q21836 EnsemblMetazoa:R08B4.2 GeneID:181302
KEGG:cel:CELE_R08B4.2 UCSC:R08B4.2 CTD:181302 WormBase:R08B4.2
HOGENOM:HOG000021099 InParanoid:Q21836 OMA:ERSSTHH NextBio:913362
Uniprot:Q21836
Length = 362
Score = 157 (60.3 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 36/68 (52%), Positives = 41/68 (60%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILFQ-------VWFQNRRAKYRKQEKQL--QKALTP 52
QL ELE FA++HYPD++ REELA Q VWFQNRRAKYRKQE+ P
Sbjct: 128 QLDELEKVFARTHYPDVFTREELATRVQLTEARVQVWFQNRRAKYRKQERSSTHHPYQAP 187
Query: 53 SVIPTCNG 60
IP NG
Sbjct: 188 MSIPNSNG 195
>RGD|621323 [details] [associations]
symbol:Phox2a "paired-like homeobox 2a" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=ISO] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0003357 "noradrenergic neuron
differentiation" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007568
"aging" evidence=IEP] [GO:0021523 "somatic motor neuron
differentiation" evidence=ISO] [GO:0021623 "oculomotor nerve
formation" evidence=ISO] [GO:0021642 "trochlear nerve formation"
evidence=ISO] [GO:0021703 "locus ceruleus development"
evidence=ISO] [GO:0030901 "midbrain development" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0048485
"sympathetic nervous system development" evidence=ISO] [GO:0048486
"parasympathetic nervous system development" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:U25967 RGD:621323 GO:GO:0007568 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0000790 GO:GO:0030901
GO:GO:0048485 GO:GO:0043576 GO:GO:0000977 GO:GO:0048486
GO:GO:0021523 GO:GO:0021703 GO:GO:0003357 CTD:401 eggNOG:NOG301263
HOGENOM:HOG000013060 HOVERGEN:HBG053590 KO:K09330 OrthoDB:EOG4N30PS
IPI:IPI00208271 RefSeq:NP_446321.1 UniGene:Rn.2858
ProteinModelPortal:Q62782 SMR:Q62782 STRING:Q62782 GeneID:116648
KEGG:rno:116648 UCSC:RGD:621323 InParanoid:Q62782 NextBio:619395
Genevestigator:Q62782 GermOnline:ENSRNOG00000019706 Uniprot:Q62782
Length = 281
Score = 154 (59.3 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 101 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 150
>UNIPROTKB|G3V8L2 [details] [associations]
symbol:Phox2a "Paired-like homeobox 2a" species:10116
"Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IEA] [GO:0003357 "noradrenergic neuron
differentiation" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0021523
"somatic motor neuron differentiation" evidence=IEA] [GO:0021623
"oculomotor nerve formation" evidence=IEA] [GO:0021642 "trochlear
nerve formation" evidence=IEA] [GO:0021703 "locus ceruleus
development" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0043576 "regulation of respiratory gaseous
exchange" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048485 "sympathetic nervous system development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:621323 GO:GO:0005634 EMBL:CH473956 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
UniGene:Rn.2858 Ensembl:ENSRNOT00000026702 Uniprot:G3V8L2
Length = 281
Score = 154 (59.3 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 101 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 150
>UNIPROTKB|E2R2D3 [details] [associations]
symbol:PHOX2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048485 "sympathetic nervous system
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0021703 "locus ceruleus development" evidence=IEA] [GO:0021642
"trochlear nerve formation" evidence=IEA] [GO:0021623 "oculomotor
nerve formation" evidence=IEA] [GO:0021523 "somatic motor neuron
differentiation" evidence=IEA] [GO:0003357 "noradrenergic neuron
differentiation" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0030901 GO:GO:0048485
GO:GO:0043576 GO:GO:0000977 GO:GO:0048486 GO:GO:0021523
GO:GO:0021703 GO:GO:0003357 GeneTree:ENSGT00700000104256 CTD:401
KO:K09330 OMA:KGPLWAG EMBL:AAEX03012825 RefSeq:XP_542326.2
Ensembl:ENSCAFT00000009226 GeneID:485208 KEGG:cfa:485208
NextBio:20859246 Uniprot:E2R2D3
Length = 284
Score = 154 (59.3 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 101 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 150
>UNIPROTKB|O14813 [details] [associations]
symbol:PHOX2A "Paired mesoderm homeobox protein 2A"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0021523 "somatic
motor neuron differentiation" evidence=IEA] [GO:0021623 "oculomotor
nerve formation" evidence=IEA] [GO:0021642 "trochlear nerve
formation" evidence=IEA] [GO:0021703 "locus ceruleus development"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=IEA] [GO:0048485 "sympathetic nervous system development"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0003357 "noradrenergic neuron
differentiation" evidence=IC;NAS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IC]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0071542 EMBL:CH471076 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790
GO:GO:0030901 GO:GO:0048485 GO:GO:0043576 GO:GO:0000977
GO:GO:0048486 GO:GO:0021523 GO:GO:0021703 GO:GO:0003357
Orphanet:45358 EMBL:AF022724 EMBL:AF022722 EMBL:AF022723
EMBL:AK290645 EMBL:BC041564 IPI:IPI00024171 RefSeq:NP_005160.2
UniGene:Hs.731565 ProteinModelPortal:O14813 SMR:O14813
STRING:O14813 PhosphoSite:O14813 PRIDE:O14813 DNASU:401
Ensembl:ENST00000298231 GeneID:401 KEGG:hsa:401 UCSC:uc001osh.4
CTD:401 GeneCards:GC11M071950 HGNC:HGNC:691 MIM:602078 MIM:602753
neXtProt:NX_O14813 PharmGKB:PA28093 eggNOG:NOG301263
HOGENOM:HOG000013060 HOVERGEN:HBG053590 InParanoid:O14813 KO:K09330
OMA:KGPLWAG OrthoDB:EOG4N30PS PhylomeDB:O14813 GenomeRNAi:401
NextBio:1681 Bgee:O14813 CleanEx:HS_PHOX2A Genevestigator:O14813
GermOnline:ENSG00000165462 Uniprot:O14813
Length = 284
Score = 154 (59.3 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 101 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 150
>UNIPROTKB|F1MIH1 [details] [associations]
symbol:PHOX2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048485 "sympathetic nervous system development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021703 "locus
ceruleus development" evidence=IEA] [GO:0021642 "trochlear nerve
formation" evidence=IEA] [GO:0021623 "oculomotor nerve formation"
evidence=IEA] [GO:0021523 "somatic motor neuron differentiation"
evidence=IEA] [GO:0003357 "noradrenergic neuron differentiation"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0030901
GO:GO:0048485 GO:GO:0043576 GO:GO:0000977 GO:GO:0048486
GO:GO:0021523 GO:GO:0021703 GO:GO:0003357
GeneTree:ENSGT00700000104256 OMA:KGPLWAG EMBL:DAAA02041007
IPI:IPI00705954 Ensembl:ENSBTAT00000025512 Uniprot:F1MIH1
Length = 285
Score = 154 (59.3 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 102 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 151
>UNIPROTKB|F1SUV6 [details] [associations]
symbol:PHOX2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048485 "sympathetic nervous system development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021703 "locus
ceruleus development" evidence=IEA] [GO:0021642 "trochlear nerve
formation" evidence=IEA] [GO:0021623 "oculomotor nerve formation"
evidence=IEA] [GO:0021523 "somatic motor neuron differentiation"
evidence=IEA] [GO:0003357 "noradrenergic neuron differentiation"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0030901
GO:GO:0048485 GO:GO:0043576 GO:GO:0000977 GO:GO:0048486
GO:GO:0021523 GO:GO:0021703 GO:GO:0003357
GeneTree:ENSGT00700000104256 OMA:KGPLWAG EMBL:FP090889
Ensembl:ENSSSCT00000016164 Uniprot:F1SUV6
Length = 287
Score = 154 (59.3 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 102 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 151
>UNIPROTKB|Q96QS3 [details] [associations]
symbol:ARX "Homeobox protein ARX" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0021759 "globus
pallidus development" evidence=IEA] [GO:0021800 "cerebral cortex
tangential migration" evidence=IEA] [GO:0021831 "embryonic
olfactory bulb interneuron precursor migration" evidence=IEA]
[GO:0021846 "cell proliferation in forebrain" evidence=IEA]
[GO:0021853 "cerebral cortex GABAergic interneuron migration"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0046622 "positive regulation of organ growth"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0042127 Orphanet:777 GO:GO:0046622 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG313402 KO:K09452
HOGENOM:HOG000012381 HOVERGEN:HBG004285 EMBL:AY038071
IPI:IPI00045066 RefSeq:NP_620689.1 UniGene:Hs.300304
ProteinModelPortal:Q96QS3 SMR:Q96QS3 STRING:Q96QS3
PhosphoSite:Q96QS3 DMDM:27923733 PaxDb:Q96QS3 PRIDE:Q96QS3
Ensembl:ENST00000379044 GeneID:170302 KEGG:hsa:170302
UCSC:uc004dbp.4 CTD:170302 GeneCards:GC0XM025021 HGNC:HGNC:18060
MIM:300004 MIM:300215 MIM:300382 MIM:300419 MIM:308350 MIM:309510
neXtProt:NX_Q96QS3 Orphanet:1934 Orphanet:2508 Orphanet:94083
Orphanet:3175 Orphanet:3451 Orphanet:452 PharmGKB:PA25024
InParanoid:Q96QS3 OMA:VTHPEER PhylomeDB:Q96QS3 GenomeRNAi:170302
NextBio:88881 Bgee:Q96QS3 CleanEx:HS_ARX Genevestigator:Q96QS3
GermOnline:ENSG00000004848 GO:GO:0021846 GO:GO:0021853
GO:GO:0021800 GO:GO:0021831 GO:GO:0021759 Uniprot:Q96QS3
Length = 562
Score = 149 (57.5 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE AF K+HYPD++ REELA+ QVWFQNRRAK+RK+EK
Sbjct: 339 QLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 388
Score = 33 (16.7 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 105 SLSALRMNSSHHSNLATPM 123
S++ALR+ + H+ T +
Sbjct: 531 SIAALRLKAKEHAAQLTQL 549
>MGI|MGI:1097716 [details] [associations]
symbol:Arx "aristaless related homeobox" species:10090 "Mus
musculus" [GO:0001764 "neuron migration" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0021759
"globus pallidus development" evidence=IMP] [GO:0021772 "olfactory
bulb development" evidence=IMP] [GO:0021800 "cerebral cortex
tangential migration" evidence=IMP] [GO:0021831 "embryonic
olfactory bulb interneuron precursor migration" evidence=IMP]
[GO:0021846 "cell proliferation in forebrain" evidence=IMP]
[GO:0021853 "cerebral cortex GABAergic interneuron migration"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046622 "positive
regulation of organ growth" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1097716 GO:GO:0005634
GO:GO:0007411 GO:GO:0001764 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0046622 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
eggNOG:NOG313402 KO:K09452 GeneTree:ENSGT00700000104279
HOGENOM:HOG000012381 HOVERGEN:HBG004285 OrthoDB:EOG43TZW9
CTD:170302 GO:GO:0021846 GO:GO:0021853 GO:GO:0021800 GO:GO:0021831
GO:GO:0021759 EMBL:AB006103 EMBL:AB026674 EMBL:AL590876
EMBL:BC052033 IPI:IPI00126550 RefSeq:NP_031518.2 UniGene:Mm.275547
ProteinModelPortal:O35085 SMR:O35085 STRING:O35085
PhosphoSite:O35085 PRIDE:O35085 Ensembl:ENSMUST00000046565
Ensembl:ENSMUST00000113947 GeneID:11878 KEGG:mmu:11878
UCSC:uc009tsq.1 InParanoid:O35085 NextBio:279907 Bgee:O35085
CleanEx:MM_ARX Genevestigator:O35085 GermOnline:ENSMUSG00000035277
Uniprot:O35085
Length = 564
Score = 149 (57.5 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE AF K+HYPD++ REELA+ QVWFQNRRAK+RK+EK
Sbjct: 341 QLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 390
Score = 33 (16.7 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 105 SLSALRMNSSHHSNLATPM 123
S++ALR+ + H+ T +
Sbjct: 533 SIAALRLKAKEHAAQLTQL 551
>RGD|1562672 [details] [associations]
symbol:Arx "aristaless related homeobox" species:10116 "Rattus
norvegicus" [GO:0001764 "neuron migration" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0021759 "globus pallidus
development" evidence=ISO] [GO:0021772 "olfactory bulb development"
evidence=ISO] [GO:0021800 "cerebral cortex tangential migration"
evidence=ISO] [GO:0021831 "embryonic olfactory bulb interneuron
precursor migration" evidence=ISO] [GO:0021846 "cell proliferation
in forebrain" evidence=ISO] [GO:0021853 "cerebral cortex GABAergic
interneuron migration" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0042127 "regulation of cell proliferation"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046622 "positive regulation of organ growth"
evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1562672 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0046622 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG313402 KO:K09452
HOGENOM:HOG000012381 HOVERGEN:HBG004285 CTD:170302 GO:GO:0021846
GO:GO:0021853 GO:GO:0021800 GO:GO:0021831 GO:GO:0021759
EMBL:EF638804 IPI:IPI00858330 RefSeq:NP_001093644.1
UniGene:Rn.22484 ProteinModelPortal:A6YP92 SMR:A6YP92 STRING:A6YP92
GeneID:317268 KEGG:rno:317268 NextBio:671526 ArrayExpress:A6YP92
Genevestigator:A6YP92 Uniprot:A6YP92
Length = 566
Score = 149 (57.5 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE AF K+HYPD++ REELA+ QVWFQNRRAK+RK+EK
Sbjct: 343 QLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 392
Score = 33 (16.7 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 105 SLSALRMNSSHHSNLATPM 123
S++ALR+ + H+ T +
Sbjct: 535 SIAALRLKAKEHAAQLTQL 553
>UNIPROTKB|D4A5S8 [details] [associations]
symbol:Arx "Homeobox protein ARX" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 IPI:IPI00950113
Ensembl:ENSRNOT00000067410 ArrayExpress:D4A5S8 Uniprot:D4A5S8
Length = 566
Score = 149 (57.5 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE AF K+HYPD++ REELA+ QVWFQNRRAK+RK+EK
Sbjct: 343 QLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 392
Score = 33 (16.7 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 105 SLSALRMNSSHHSNLATPM 123
S++ALR+ + H+ T +
Sbjct: 535 SIAALRLKAKEHAAQLTQL 553
>UNIPROTKB|F1LQW2 [details] [associations]
symbol:Arx "Homeobox protein ARX" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1562672 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0046622 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 GO:GO:0021846
GO:GO:0021853 GO:GO:0021800 GO:GO:0021831 GO:GO:0021759
IPI:IPI00858330 Ensembl:ENSRNOT00000049655 ArrayExpress:F1LQW2
Uniprot:F1LQW2
Length = 566
Score = 149 (57.5 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE AF K+HYPD++ REELA+ QVWFQNRRAK+RK+EK
Sbjct: 343 QLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 392
Score = 33 (16.7 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 105 SLSALRMNSSHHSNLATPM 123
S++ALR+ + H+ T +
Sbjct: 535 SIAALRLKAKEHAAQLTQL 553
>WB|WBGene00000433 [details] [associations]
symbol:ceh-8 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007389
GeneTree:ENSGT00700000104279 eggNOG:NOG261733 EMBL:Z81143
PIR:T27812 RefSeq:NP_492246.2 UniGene:Cel.19040
ProteinModelPortal:Q94398 SMR:Q94398 IntAct:Q94398
EnsemblMetazoa:ZK265.4 GeneID:191617 KEGG:cel:CELE_ZK265.4
UCSC:ZK265.4 CTD:191617 WormBase:ZK265.4 InParanoid:Q94398
OMA:DKKQRRN NextBio:949694 Uniprot:Q94398
Length = 276
Score = 153 (58.9 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 32/51 (62%), Positives = 37/51 (72%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQ 45
QL LEAAF K+HYPD+Y RE LA + QVWFQNRRAK+R+QEKQ
Sbjct: 71 QLHALEAAFDKTHYPDVYARETLAAKVQLPEVRVQVWFQNRRAKFRRQEKQ 121
>UNIPROTKB|E2RMY1 [details] [associations]
symbol:PHOX2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:1901166 "neural crest cell migration involved
in autonomic nervous system development" evidence=IEA] [GO:0071773
"cellular response to BMP stimulus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0061452
"retrotrapezoid nucleus neuron differentiation" evidence=IEA]
[GO:0060541 "respiratory system development" evidence=IEA]
[GO:0048894 "efferent axon development in a lateral line nerve"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
[GO:0048486 "parasympathetic nervous system development"
evidence=IEA] [GO:0048485 "sympathetic nervous system development"
evidence=IEA] [GO:0048484 "enteric nervous system development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0021934 "hindbrain tangential cell migration"
evidence=IEA] [GO:0021723 "medullary reticular formation
development" evidence=IEA] [GO:0021533 "cell differentiation in
hindbrain" evidence=IEA] [GO:0010001 "glial cell differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0003360 "brainstem development"
evidence=IEA] [GO:0003357 "noradrenergic neuron differentiation"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0000978 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0001764 GO:GO:0008285 GO:GO:0045944
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0071773 GO:GO:0045666 GO:GO:0048839
GO:GO:0000977 GO:GO:0010001 GO:GO:0021533 GO:GO:0003357
GeneTree:ENSGT00700000104256 KO:K09330 CTD:8929 OMA:LVKTSMF
GO:GO:0048894 GO:GO:0021934 EMBL:AAEX03009007 RefSeq:XP_852840.1
Ensembl:ENSCAFT00000002818 GeneID:610284 KEGG:cfa:610284
NextBio:20895849 Uniprot:E2RMY1
Length = 314
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 109 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 158
>UNIPROTKB|Q99453 [details] [associations]
symbol:PHOX2B "Paired mesoderm homeobox protein 2B"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0048484 "enteric nervous system development" evidence=IEP]
[GO:0003360 "brainstem development" evidence=IEP] [GO:0048483
"autonomic nervous system development" evidence=IMP] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IDA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IC;ISS] [GO:1901166 "neural crest cell
migration involved in autonomic nervous system development"
evidence=ISS] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=ISS] [GO:0010001
"glial cell differentiation" evidence=ISS] [GO:0021723 "medullary
reticular formation development" evidence=ISS] [GO:0061452
"retrotrapezoid nucleus neuron differentiation" evidence=ISS]
[GO:0048485 "sympathetic nervous system development" evidence=ISS]
[GO:0048839 "inner ear development" evidence=ISS] [GO:0060541
"respiratory system development" evidence=ISS] [GO:0071773
"cellular response to BMP stimulus" evidence=ISS] [GO:0003357
"noradrenergic neuron differentiation" evidence=IC;ISS] [GO:0001764
"neuron migration" evidence=ISS] [GO:0021533 "cell differentiation
in hindbrain" evidence=ISS] [GO:0021934 "hindbrain tangential cell
migration" evidence=ISS] [GO:0048486 "parasympathetic nervous
system development" evidence=ISS] [GO:0048894 "efferent axon
development in a lateral line nerve" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AF117979 GO:GO:0001764 GO:GO:0008285 GO:GO:0071542
GO:GO:0045944 GO:GO:0045665 GO:GO:0002087 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000978
GO:GO:0000790 GO:GO:0071773 GO:GO:0045666 Orphanet:635
GO:GO:0048839 GO:GO:0048485 Orphanet:99803 Orphanet:661
GO:GO:0048484 GO:GO:0048486 GO:GO:0010001 MIM:209880 GO:GO:0003360
GO:GO:0021533 GO:GO:0003357 eggNOG:NOG301263 HOGENOM:HOG000013060
KO:K09330 EMBL:D82344 EMBL:AB015671 EMBL:BC017199 IPI:IPI00293143
PIR:JC5273 RefSeq:NP_003915.2 UniGene:Hs.87202
ProteinModelPortal:Q99453 SMR:Q99453 STRING:Q99453
PhosphoSite:Q99453 DMDM:116242712 PaxDb:Q99453 PRIDE:Q99453
Ensembl:ENST00000226382 GeneID:8929 KEGG:hsa:8929 UCSC:uc003gwf.4
CTD:8929 GeneCards:GC04M041746 H-InvDB:HIX0120072 HGNC:HGNC:9143
MIM:603851 MIM:613013 neXtProt:NX_Q99453 PharmGKB:PA33467
HOVERGEN:HBG094678 InParanoid:Q99453 OMA:LVKTSMF PhylomeDB:Q99453
GenomeRNAi:8929 NextBio:33574 Bgee:Q99453 CleanEx:HS_PHOX2B
Genevestigator:Q99453 GermOnline:ENSG00000109132 GO:GO:0048894
GO:GO:0021934 GO:GO:0021723 GO:GO:1901166 GO:GO:0060541
GO:GO:0061452 Uniprot:Q99453
Length = 314
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 109 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 158
>MGI|MGI:1100882 [details] [associations]
symbol:Phox2b "paired-like homeobox 2b" species:10090 "Mus
musculus" [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=ISO] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=ISO] [GO:0001764
"neuron migration" evidence=IMP] [GO:0002087 "regulation of
respiratory gaseous exchange by neurological system process"
evidence=IMP] [GO:0003357 "noradrenergic neuron differentiation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0010001 "glial cell differentiation"
evidence=IMP] [GO:0021533 "cell differentiation in hindbrain"
evidence=IMP] [GO:0021934 "hindbrain tangential cell migration"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0035914 "skeletal muscle cell differentiation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IGI] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048468 "cell development" evidence=IMP] [GO:0048483 "autonomic
nervous system development" evidence=ISO] [GO:0048484 "enteric
nervous system development" evidence=IMP] [GO:0048485 "sympathetic
nervous system development" evidence=IMP] [GO:0048486
"parasympathetic nervous system development" evidence=IMP]
[GO:0048839 "inner ear development" evidence=IMP] [GO:0048894
"efferent axon development in a lateral line nerve" evidence=IMP]
[GO:0060541 "respiratory system development" evidence=IMP]
[GO:0061452 "retrotrapezoid nucleus neuron differentiation"
evidence=IMP] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IMP] [GO:0071773 "cellular response to BMP stimulus"
evidence=IDA] [GO:1901166 "neural crest cell migration involved in
autonomic nervous system development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:1100882 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0071542 GO:GO:0045944 GO:GO:0045665 GO:GO:0002087
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790
GO:GO:0071773 GO:GO:0045666 GO:GO:0048839 GO:GO:0035914
GO:GO:0048485 GO:GO:0000977 GO:GO:0048484 GO:GO:0048486
GO:GO:0010001 GO:GO:0021533 GO:GO:0003357
GeneTree:ENSGT00700000104256 eggNOG:NOG301263 HOGENOM:HOG000013060
KO:K09330 CTD:8929 HOVERGEN:HBG094678 OMA:LVKTSMF GO:GO:0048894
GO:GO:0021934 GO:GO:0021723 GO:GO:1901166 GO:GO:0060541
GO:GO:0061452 EMBL:Y14493 EMBL:AB015672 EMBL:BC079610
IPI:IPI00132995 RefSeq:NP_032914.1 UniGene:Mm.62505
ProteinModelPortal:O35690 SMR:O35690 STRING:O35690
PhosphoSite:O35690 PRIDE:O35690 Ensembl:ENSMUST00000012664
GeneID:18935 KEGG:mmu:18935 UCSC:uc008xpm.1 InParanoid:O35690
NextBio:295256 Bgee:O35690 CleanEx:MM_PHOX2B Genevestigator:O35690
GermOnline:ENSMUSG00000012520 Uniprot:O35690
Length = 314
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 109 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 158
>UNIPROTKB|F2Z3R9 [details] [associations]
symbol:Phox2b "Protein Phox2b" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1560582 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
OMA:LVKTSMF IPI:IPI00359254 ProteinModelPortal:F2Z3R9 SMR:F2Z3R9
Ensembl:ENSRNOT00000003136 Uniprot:F2Z3R9
Length = 314
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 109 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 158
>UNIPROTKB|E1BME7 [details] [associations]
symbol:PHOX2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:1901166 "neural crest cell migration involved in
autonomic nervous system development" evidence=IEA] [GO:0071773
"cellular response to BMP stimulus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0061452
"retrotrapezoid nucleus neuron differentiation" evidence=IEA]
[GO:0060541 "respiratory system development" evidence=IEA]
[GO:0048894 "efferent axon development in a lateral line nerve"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
[GO:0048486 "parasympathetic nervous system development"
evidence=IEA] [GO:0048485 "sympathetic nervous system development"
evidence=IEA] [GO:0048484 "enteric nervous system development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0021934 "hindbrain tangential cell migration"
evidence=IEA] [GO:0021723 "medullary reticular formation
development" evidence=IEA] [GO:0021533 "cell differentiation in
hindbrain" evidence=IEA] [GO:0010001 "glial cell differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0003360 "brainstem development"
evidence=IEA] [GO:0003357 "noradrenergic neuron differentiation"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0000978 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0001764 GO:GO:0008285 GO:GO:0045944
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0071773 GO:GO:0045666 GO:GO:0048839
GO:GO:0000977 GO:GO:0010001 GO:GO:0021533 GO:GO:0003357
GeneTree:ENSGT00700000104256 KO:K09330 CTD:8929 OMA:LVKTSMF
GO:GO:0048894 GO:GO:0021934 EMBL:DAAA02017501 IPI:IPI01002460
RefSeq:XP_002688259.1 UniGene:Bt.46280 Ensembl:ENSBTAT00000061286
GeneID:783703 KEGG:bta:783703 NextBio:20926255 Uniprot:E1BME7
Length = 315
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 109 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 158
>UNIPROTKB|F1NMR5 [details] [associations]
symbol:F1NMR5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA] [GO:0003357
"noradrenergic neuron differentiation" evidence=IEA] [GO:0003360
"brainstem development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0010001 "glial
cell differentiation" evidence=IEA] [GO:0021533 "cell
differentiation in hindbrain" evidence=IEA] [GO:0021723 "medullary
reticular formation development" evidence=IEA] [GO:0021934
"hindbrain tangential cell migration" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0048485 "sympathetic
nervous system development" evidence=IEA] [GO:0048486
"parasympathetic nervous system development" evidence=IEA]
[GO:0048839 "inner ear development" evidence=IEA] [GO:0048894
"efferent axon development in a lateral line nerve" evidence=IEA]
[GO:0060541 "respiratory system development" evidence=IEA]
[GO:0061452 "retrotrapezoid nucleus neuron differentiation"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0071773 "cellular response to BMP stimulus"
evidence=IEA] [GO:1901166 "neural crest cell migration involved in
autonomic nervous system development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0008285 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0071773 GO:GO:0000977
GeneTree:ENSGT00700000104256 OMA:LVKTSMF EMBL:AADN02031232
EMBL:AADN02031233 IPI:IPI00813291 Ensembl:ENSGALT00000037451
Uniprot:F1NMR5
Length = 229
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 35/67 (52%), Positives = 42/67 (62%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RK L++A +
Sbjct: 109 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRK----LERAAAAAA 164
Query: 55 IPTCNGA 61
NGA
Sbjct: 165 AAAKNGA 171
>UNIPROTKB|F1NMR6 [details] [associations]
symbol:F1NMR6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
EMBL:AADN02031232 EMBL:AADN02031233 IPI:IPI00823059
Ensembl:ENSGALT00000037450 Uniprot:F1NMR6
Length = 213
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 35/67 (52%), Positives = 42/67 (62%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RK L++A +
Sbjct: 106 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRK----LERAAAAAA 161
Query: 55 IPTCNGA 61
NGA
Sbjct: 162 AAAKNGA 168
>UNIPROTKB|E2R5X4 [details] [associations]
symbol:RAX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
CTD:84839 KO:K09333 OMA:SFGPHAF EMBL:AAEX03012573
RefSeq:XP_854816.1 Ensembl:ENSCAFT00000030462 GeneID:612000
KEGG:cfa:612000 NextBio:20897534 Uniprot:E2R5X4
Length = 184
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/62 (53%), Positives = 40/62 (64%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL +LE AF SHYPD+Y REELA + QVWFQNRRAK+R+QE+ L+ P
Sbjct: 38 QLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQER-LESGSGPVA 96
Query: 55 IP 56
P
Sbjct: 97 AP 98
>UNIPROTKB|E2RRG5 [details] [associations]
symbol:PITX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051216 "cartilage development" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0021983 "pituitary gland
development" evidence=IEA] [GO:0014707 "branchiomeric skeletal
muscle development" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0051216 GO:GO:0035116 GO:GO:0021983 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 GO:GO:0048625
GO:GO:0014707 CTD:5307 KO:K09356 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:AAEX03007790 RefSeq:XP_850773.1
Ensembl:ENSCAFT00000001631 GeneID:481513 KEGG:cfa:481513
NextBio:20856289 Uniprot:E2RRG5
Length = 313
Score = 127 (49.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L
Sbjct: 98 QQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCKG 157
Query: 54 -VIPTCNG 60
+P +G
Sbjct: 158 GYVPQFSG 165
Score = 46 (21.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ S HS+ LQ
Sbjct: 278 NSSLASLRLKSKQHSSFGYGGLQ 300
>UNIPROTKB|F1MU46 [details] [associations]
symbol:PITX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051216 "cartilage development" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0021983 "pituitary gland
development" evidence=IEA] [GO:0014707 "branchiomeric skeletal
muscle development" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0051216 GO:GO:0035116 GO:GO:0021983 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 GO:GO:0048625
GO:GO:0014707 CTD:5307 KO:K09356 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:DAAA02020351 IPI:IPI01002575
RefSeq:NP_001192229.1 UniGene:Bt.11284 Ensembl:ENSBTAT00000006039
GeneID:508754 KEGG:bta:508754 NextBio:20868666 Uniprot:F1MU46
Length = 314
Score = 127 (49.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L
Sbjct: 99 QQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCKG 158
Query: 54 -VIPTCNG 60
+P +G
Sbjct: 159 GYVPQFSG 166
Score = 46 (21.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ S HS+ LQ
Sbjct: 279 NSSLASLRLKSKQHSSFGYGGLQ 301
>UNIPROTKB|P78337 [details] [associations]
symbol:PITX1 "Pituitary homeobox 1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0014707 "branchiomeric skeletal
muscle development" evidence=IEA] [GO:0021983 "pituitary gland
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0001501
"skeletal system development" evidence=TAS] [GO:0009653 "anatomical
structure morphogenesis" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0005730 EMBL:CH471062 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001501 GO:GO:0051216
GO:GO:0035116 GO:GO:0021983 GO:GO:0009653 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000988 GO:GO:0048625
GO:GO:0014707 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 OrthoDB:EOG4R503Q EMBL:U70370 EMBL:AF009650
EMBL:AF009648 EMBL:AF009649 EMBL:AK290635 EMBL:AC004764
EMBL:AC008406 EMBL:BC009412 EMBL:BC003685 IPI:IPI00019182
RefSeq:NP_002644.4 UniGene:Hs.84136 ProteinModelPortal:P78337
SMR:P78337 IntAct:P78337 MINT:MINT-260914 STRING:P78337
PhosphoSite:P78337 DMDM:108935922 PaxDb:P78337 PeptideAtlas:P78337
PRIDE:P78337 DNASU:5307 Ensembl:ENST00000265340
Ensembl:ENST00000506438 GeneID:5307 KEGG:hsa:5307 UCSC:uc010jea.3
CTD:5307 GeneCards:GC05M134363 H-InvDB:HIX0005190 HGNC:HGNC:9004
HPA:HPA008743 MIM:119800 MIM:602149 neXtProt:NX_P78337
Orphanet:293144 Orphanet:293150 PharmGKB:PA33338 InParanoid:P78337
KO:K09356 OMA:CKNSYLP PhylomeDB:P78337 ChiTaRS:PITX1
GenomeRNAi:5307 NextBio:20514 ArrayExpress:P78337 Bgee:P78337
CleanEx:HS_PITX1 Genevestigator:P78337 GermOnline:ENSG00000069011
Uniprot:P78337
Length = 314
Score = 127 (49.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L
Sbjct: 99 QQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCKG 158
Query: 54 -VIPTCNG 60
+P +G
Sbjct: 159 GYVPQFSG 166
Score = 46 (21.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ S HS+ LQ
Sbjct: 279 NSSLASLRLKSKQHSSFGYGGLQ 301
>MGI|MGI:107374 [details] [associations]
symbol:Pitx1 "paired-like homeodomain transcription factor 1"
species:10090 "Mus musculus" [GO:0000988 "protein binding
transcription factor activity" evidence=IPI] [GO:0001501 "skeletal
system development" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0014707 "branchiomeric skeletal muscle development"
evidence=IMP] [GO:0021983 "pituitary gland development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IGI] [GO:0035137 "hindlimb morphogenesis"
evidence=IDA;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0048625
"myoblast cell fate commitment" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:107374 GO:GO:0005737 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0051216
GO:GO:0035116 GO:GO:0021983 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000988 GO:GO:0048625 GO:GO:0014707
eggNOG:NOG249113 HOGENOM:HOG000273886 HOVERGEN:HBG068770
OrthoDB:EOG4R503Q CTD:5307 KO:K09356 OMA:CKNSYLP EMBL:U54499
EMBL:U71206 EMBL:BC012696 EMBL:U70371 IPI:IPI00108083
RefSeq:NP_035227.1 UniGene:Mm.135195 ProteinModelPortal:P70314
SMR:P70314 STRING:P70314 PhosphoSite:P70314 PRIDE:P70314
Ensembl:ENSMUST00000021968 GeneID:18740 KEGG:mmu:18740
InParanoid:P70314 NextBio:294881 Bgee:P70314 CleanEx:MM_PITX1
Genevestigator:P70314 GermOnline:ENSMUSG00000021506 Uniprot:P70314
Length = 315
Score = 127 (49.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L
Sbjct: 100 QQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCKG 159
Query: 54 -VIPTCNG 60
+P +G
Sbjct: 160 GYVPQFSG 167
Score = 46 (21.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 103 NKSLSALRMNSSHHSNLATPMLQ 125
N SL++LR+ S HS+ LQ
Sbjct: 280 NSSLASLRLKSKQHSSFGYGGLQ 302
>MGI|MGI:109330 [details] [associations]
symbol:Prop1 "paired like homeodomain factor 1" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001568 "blood
vessel development" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IPI] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0016477 "cell migration" evidence=IGI]
[GO:0021979 "hypothalamus cell differentiation" evidence=IMP]
[GO:0021984 "adenohypophysis development" evidence=IMP] [GO:0043066
"negative regulation of apoptotic process" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI;IDA] [GO:0048732 "gland
development" evidence=IMP] [GO:0048850 "hypophysis morphogenesis"
evidence=IMP] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IGI] [GO:0060126 "somatotropin secreting cell
differentiation" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:109330 GO:GO:0043066
GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0001568 GO:GO:0009953 GO:GO:0060070
EMBL:AL627215 GeneTree:ENSGT00700000104273 GO:GO:0021979
GO:GO:0060126 CTD:5626 eggNOG:NOG293463 HOVERGEN:HBG053691
KO:K09327 OrthoDB:EOG4BZN3X GO:GO:0048850 OMA:TCFPHPY EMBL:U77946
IPI:IPI00125485 RefSeq:NP_032962.1 UniGene:Mm.1386
ProteinModelPortal:P97458 SMR:P97458 IntAct:P97458 STRING:P97458
PhosphoSite:P97458 DNASU:19127 Ensembl:ENSMUST00000051159
GeneID:19127 KEGG:mmu:19127 UCSC:uc007itg.1 InParanoid:Q5NCG9
NextBio:295738 Bgee:P97458 CleanEx:MM_PROP1 Genevestigator:P97458
GermOnline:ENSMUSG00000044542 Uniprot:P97458
Length = 223
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 38/87 (43%), Positives = 49/87 (56%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL +LE+AF ++ YPDI+ RE LA QVWFQNRRAK RKQE+ L + +
Sbjct: 77 QLEQLESAFGRNQYPDIWAREGLAQDTGLSEARIQVWFQNRRAKQRKQERSLLQPIAHLS 136
Query: 55 IPTCNGAMMRN-IYPTTSRGYQPYPHP 80
T +G + + YP T G P P P
Sbjct: 137 TATFSGFLPESSAYPYTY-GTPPPPAP 162
>UNIPROTKB|F1NYD6 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0060040 "retinal bipolar neuron
differentiation" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 InterPro:IPR023339 PROSITE:PS51496
IPI:IPI00577521 EMBL:AADN02041203 Ensembl:ENSGALT00000013957
OMA:MEVSRKA Uniprot:F1NYD6
Length = 215
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF ++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK ++ SV
Sbjct: 33 QLEELEKAFNEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKCWGRS---SV 89
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 90 MAEYGLYGAMVRHSIP 105
>UNIPROTKB|P47237 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG326044
GeneTree:ENSGT00680000099553 HOVERGEN:HBG009115
HOGENOM:HOG000230939 EMBL:S69508 IPI:IPI00819463 PIR:I51234
UniGene:Gga.556 ProteinModelPortal:P47237 SMR:P47237 STRING:P47237
Ensembl:ENSGALT00000040116 ArrayExpress:P47237 Uniprot:P47237
Length = 216
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 20 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 79
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 80 NTPSHIPISSS------FSTSV--YQPIPQPTT 104
>UNIPROTKB|E9PIX4 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
IPI:IPI00975481 ProteinModelPortal:E9PIX4 SMR:E9PIX4
Ensembl:ENST00000464174 ArrayExpress:E9PIX4 Bgee:E9PIX4
Uniprot:E9PIX4
Length = 221
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 19 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 78
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 79 NTPSHIPISSS------FSTSV--YQPIPQPTT 103
>UNIPROTKB|G3V567 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
ProteinModelPortal:G3V567 SMR:G3V567 Ensembl:ENST00000530373
ArrayExpress:G3V567 Bgee:G3V567 Uniprot:G3V567
Length = 128
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 19 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 78
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 79 NTPSHIPISSS------FSTSV--YQPIPQPTT 103
>ZFIN|ZDB-GENE-050407-3 [details] [associations]
symbol:phox2bb "paired-like homeobox 2bb"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048484 "enteric nervous system development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-050407-3 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0048484 eggNOG:NOG301263 HOGENOM:HOG000013060
HOVERGEN:HBG053590 OrthoDB:EOG4N30PS EMBL:AY883168 IPI:IPI00774848
UniGene:Dr.160837 UniGene:Dr.93056 ProteinModelPortal:Q3T498
SMR:Q3T498 STRING:Q3T498 Uniprot:Q3T498
Length = 285
Score = 150 (57.9 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 32/52 (61%), Positives = 37/52 (71%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF---------QVWFQNRRAKYRKQEK 44
QL ELE FA++HYPDIY REELA+ QVWFQNRRAK+RKQE+
Sbjct: 108 QLKELERVFAETHYPDIYTREELALKIDLTEARVQVQVWFQNRRAKFRKQER 159
>UNIPROTKB|Q8MJI9 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9913 "Bos taurus" [GO:0060126 "somatotropin secreting cell
differentiation" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048850 "hypophysis
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0021979 "hypothalamus cell differentiation"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043066 GO:GO:0016477 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0001568 GO:GO:0009953
GO:GO:0000976 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 EMBL:AF453510 EMBL:AF453511
EMBL:AF453512 IPI:IPI00697381 RefSeq:NP_777103.1 UniGene:Bt.11213
ProteinModelPortal:Q8MJI9 SMR:Q8MJI9 STRING:Q8MJI9
Ensembl:ENSBTAT00000009680 GeneID:282563 KEGG:bta:282563 CTD:5626
eggNOG:NOG293463 HOGENOM:HOG000115706 HOVERGEN:HBG053691
InParanoid:Q8MJI9 KO:K09327 OrthoDB:EOG4BZN3X NextBio:20806292
GO:GO:0048850 Uniprot:Q8MJI9
Length = 226
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL +LE+AF ++ YPDI+ RE LA QVWFQNRRAK RKQE+ L + L
Sbjct: 80 QLEQLESAFGRNQYPDIWARESLAQDTGLSEARIQVWFQNRRAKQRKQERSLLQPLAHLS 139
Query: 55 IPTCNGAMMRN-----IYPTTSRGYQPYPHP 80
T +G + YPT +PHP
Sbjct: 140 PATFSGFLPEPPSCPYSYPTPPPPMTCFPHP 170
>UNIPROTKB|Q9TTD8 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9615 "Canis lupus familiaris" [GO:0060126 "somatotropin
secreting cell differentiation" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0048850 "hypophysis morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0021979 "hypothalamus cell
differentiation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043066 GO:GO:0016477 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001568
GO:GO:0009953 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 CTD:5626 eggNOG:NOG293463
HOGENOM:HOG000115706 HOVERGEN:HBG053691 KO:K09327 OrthoDB:EOG4BZN3X
GO:GO:0048850 EMBL:AF126157 RefSeq:NP_001018643.1 UniGene:Cfa.24675
ProteinModelPortal:Q9TTD8 SMR:Q9TTD8 Ensembl:ENSCAFT00000000419
GeneID:474647 KEGG:cfa:474647 InParanoid:Q9TTD8 OMA:TCFPHPY
NextBio:20850629 Uniprot:Q9TTD8
Length = 226
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL +LE AF ++ YPDI+ RE LA QVWFQNRRAK RKQE+ L + L
Sbjct: 80 QLEQLETAFGRNQYPDIWAREGLARDTGLSEARIQVWFQNRRAKQRKQERSLLQPLAHLS 139
Query: 55 IPTCNGAMMRN-----IYPTTSRGYQPYPHP 80
T +G + + YPT +PHP
Sbjct: 140 PATFSGFLPESPACPYSYPTPPPPMTCFPHP 170
>UNIPROTKB|H0YLI9 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YLI9 SMR:H0YLI9
Ensembl:ENST00000558872 Bgee:H0YLI9 Uniprot:H0YLI9
Length = 225
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 38/90 (42%), Positives = 48/90 (53%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE Q+ K +
Sbjct: 127 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGV--- 183
Query: 54 VIPTCNGAMMRNIYPTTSRGYQPYP---HP 80
++ T N + P + G P HP
Sbjct: 184 ILGTANHLDACRVAPYVNMGALRMPFQQHP 213
>UNIPROTKB|J9P3P5 [details] [associations]
symbol:OTP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 OMA:RWATAGM EMBL:AAEX03002130
Ensembl:ENSCAFT00000046395 Uniprot:J9P3P5
Length = 327
Score = 120 (47.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAI----------LFQVWFQNRRAKYRKQEKQLQKALT 51
QL ELE +FAK+HYPDI+ REELA+ +FQ W RRAK++K++K
Sbjct: 115 QLNELERSFAKTHYPDIFMREELALRIGLTESRVQVFQSWC--RRAKWKKRKKTTNLCRA 172
Query: 52 P-SVIPT 57
P +++PT
Sbjct: 173 PGTLLPT 179
Score = 51 (23.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 15/60 (25%), Positives = 24/60 (40%)
Query: 59 NGA-MMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSSHHS 117
NGA + ++Y G P P N L + D W S+++LR + H+
Sbjct: 262 NGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDSSDVWRGTSIASLRRKALEHT 321
>UNIPROTKB|F1P7I2 [details] [associations]
symbol:ALX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104013
OMA:PYSHPHG EMBL:AAEX03004725 EMBL:AAEX03004724
Ensembl:ENSCAFT00000031481 Uniprot:F1P7I2
Length = 254
Score = 147 (56.8 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALTP 52
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ ++Q+ P
Sbjct: 75 QLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERFGKIQEGRNP 134
>UNIPROTKB|F1S615 [details] [associations]
symbol:LOC100621405 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104013
OMA:PYSHPHG EMBL:CU137690 Ensembl:ENSSSCT00000007462 Uniprot:F1S615
Length = 254
Score = 147 (56.8 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALTP 52
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ ++Q+ P
Sbjct: 75 QLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERYGKIQEGRNP 134
>UNIPROTKB|F1NFE6 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0002063
"chondrocyte development" evidence=IEA] [GO:0003170 "heart valve
development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0032330
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0048743
GO:GO:0045880 GO:GO:2000172 EMBL:AADN02017635 EMBL:AADN02017636
EMBL:AADN02017637 EMBL:AADN02017638 IPI:IPI00577004
Ensembl:ENSGALT00000026949 OMA:ARVQXVQ Uniprot:F1NFE6
Length = 221
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 37/77 (48%), Positives = 45/77 (58%)
Query: 1 EQLAELEAAFAKSHYPDIYCREEL--------AILFQVWFQNRRAKYRKQEKQLQKAL-- 50
EQL ELE F ++HYPD + REEL A + QVWFQNRRAK RKQE Q+ K +
Sbjct: 61 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQQVWFQNRRAKCRKQENQMHKGVIL 120
Query: 51 -TPSVIPTCNGAMMRNI 66
T S + C A N+
Sbjct: 121 GTASHLDACRVAPYVNM 137
>UNIPROTKB|Q7YRX0 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox
protein 2" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 HOGENOM:HOG000231518 HSSP:P06601
GeneTree:ENSGT00700000104256 HOVERGEN:HBG021349 EMBL:AY211276
IPI:IPI00706984 RefSeq:NP_872594.1 UniGene:Bt.87576
ProteinModelPortal:Q7YRX0 SMR:Q7YRX0 STRING:Q7YRX0
Ensembl:ENSBTAT00000012858 GeneID:359713 KEGG:bta:359713 CTD:84839
eggNOG:NOG248147 InParanoid:Q7YRX0 KO:K09333 OMA:SFGPHAF
OrthoDB:EOG4V4387 NextBio:20812744 Uniprot:Q7YRX0
Length = 184
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 30/50 (60%), Positives = 36/50 (72%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL +LE AF SHYPD+Y REELA + QVWFQNRRAK+R+QE+
Sbjct: 38 QLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQER 87
>UNIPROTKB|G3V243 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox like
1" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CH471139 EMBL:AC005777
OMA:SFGPHAF UniGene:Hs.532691 HGNC:HGNC:18286
ProteinModelPortal:G3V243 SMR:G3V243 Ensembl:ENST00000555633
ArrayExpress:G3V243 Bgee:G3V243 Uniprot:G3V243
Length = 230
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 30/50 (60%), Positives = 36/50 (72%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL +LE AF SHYPD+Y REELA + QVWFQNRRAK+R+QE+
Sbjct: 84 QLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQER 133
>UNIPROTKB|Q96IS3 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox
protein 2" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Orphanet:1872 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518 HSSP:P06601
EMBL:AC005777 HOVERGEN:HBG021349 CTD:84839 eggNOG:NOG248147
KO:K09333 OrthoDB:EOG4V4387 EMBL:AY211277 EMBL:BC007284
EMBL:BC018709 EMBL:BC032512 IPI:IPI00063781 RefSeq:NP_116142.1
UniGene:Hs.532691 ProteinModelPortal:Q96IS3 SMR:Q96IS3
STRING:Q96IS3 DMDM:74760880 PRIDE:Q96IS3 Ensembl:ENST00000395106
GeneID:84839 KEGG:hsa:84839 UCSC:uc002lyr.3 GeneCards:GC19M003769
HGNC:HGNC:18286 MIM:610362 MIM:610381 MIM:613757 neXtProt:NX_Q96IS3
PharmGKB:PA162400734 InParanoid:Q96IS3 PhylomeDB:Q96IS3
GenomeRNAi:84839 NextBio:75065 ArrayExpress:Q96IS3 Bgee:Q96IS3
CleanEx:HS_RAX2 Genevestigator:Q96IS3 Uniprot:Q96IS3
Length = 184
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 30/50 (60%), Positives = 36/50 (72%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL +LE AF SHYPD+Y REELA + QVWFQNRRAK+R+QE+
Sbjct: 38 QLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQER 87
>UNIPROTKB|F1S7P4 [details] [associations]
symbol:RAX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
OMA:SFGPHAF EMBL:FP102497 Ensembl:ENSSSCT00000014739 Uniprot:F1S7P4
Length = 184
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 30/50 (60%), Positives = 36/50 (72%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL +LE AF SHYPD+Y REELA + QVWFQNRRAK+R+QE+
Sbjct: 38 QLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQER 87
>RGD|628759 [details] [associations]
symbol:Prop1 "PROP paired-like homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0009887 "organ morphogenesis" evidence=ISO]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISO]
[GO:0016477 "cell migration" evidence=ISO] [GO:0021979
"hypothalamus cell differentiation" evidence=ISO] [GO:0021984
"adenohypophysis development" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0048732 "gland development"
evidence=ISO] [GO:0048850 "hypophysis morphogenesis" evidence=ISO]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO] [GO:0060126 "somatotropin secreting cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:628759 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:P06601 CTD:5626 eggNOG:NOG293463 HOGENOM:HOG000115706
HOVERGEN:HBG053691 KO:K09327 OrthoDB:EOG4BZN3X IPI:IPI00194856
EMBL:AB037922 RefSeq:NP_705891.1 UniGene:Rn.86655
ProteinModelPortal:Q8CJH7 SMR:Q8CJH7 STRING:Q8CJH7
PhosphoSite:Q8CJH7 GeneID:266738 KEGG:rno:266738 UCSC:RGD:628759
InParanoid:Q8CJH7 NextBio:624589 Genevestigator:Q8CJH7
Uniprot:Q8CJH7
Length = 223
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 40/92 (43%), Positives = 52/92 (56%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL +LE+AF ++ YPDI+ RE LA QVWFQNRRAK RKQE+ L + T +
Sbjct: 77 QLGQLESAFGRNQYPDIWVREGLAQDTGLSEARIQVWFQNRRAKQRKQERSLLQP-TAHL 135
Query: 55 IP-TCNGAMMRNI-YPTTSRGYQP----YPHP 80
P T +G + + YP T P +PHP
Sbjct: 136 SPATFSGFLSESSPYPYTYTTPPPPVPCFPHP 167
>FB|FBgn0023489 [details] [associations]
symbol:Pph13 "PvuII-PstI homology 13" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] [GO:0042052 "rhabdomere
development" evidence=IMP] [GO:0042463 "ocellus photoreceptor cell
development" evidence=IGI] [GO:0042051 "compound eye photoreceptor
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0042803
GO:GO:0043565 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001077
GO:GO:0042052 HSSP:P06601 GO:GO:0042463 EMBL:AY069033
ProteinModelPortal:Q8T0V5 SMR:Q8T0V5 STRING:Q8T0V5 PRIDE:Q8T0V5
FlyBase:FBgn0023489 eggNOG:NOG321435 InParanoid:Q8T0V5
OrthoDB:EOG45TB3W ArrayExpress:Q8T0V5 Bgee:Q8T0V5 Uniprot:Q8T0V5
Length = 357
Score = 151 (58.2 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE AF ++HYPD++ REELA+ QVWFQNRRAK+RKQEK
Sbjct: 21 QLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEK 70
>UNIPROTKB|E2RMI2 [details] [associations]
symbol:VSX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040
"retinal bipolar neuron differentiation" evidence=IEA] [GO:0042551
"neuron maturation" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 GO:GO:0060040 GO:GO:0042551
InterPro:IPR023339 PROSITE:PS51496 CTD:30813 KO:K09335 OMA:WGSDHLK
EMBL:AAEX03013434 RefSeq:XP_850138.1 ProteinModelPortal:E2RMI2
Ensembl:ENSCAFT00000007019 GeneID:608128 KEGG:cfa:608128
NextBio:20893801 Uniprot:E2RMI2
Length = 363
Score = 151 (58.2 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF+++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK+ + SV
Sbjct: 174 QLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGS---SV 230
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 231 MAEYGLYGAMVRHCIP 246
>UNIPROTKB|Q9NZR4 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0060040 "retinal bipolar neuron
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL080312 GO:GO:0060040
GO:GO:0042551 Orphanet:98973 eggNOG:NOG237888 InterPro:IPR023339
PROSITE:PS51496 CTD:30813 HOVERGEN:HBG036251 KO:K09335 OMA:WGSDHLK
EMBL:AF176797 EMBL:AF251033 EMBL:AF251034 EMBL:DQ854807
EMBL:DQ854808 EMBL:DQ854809 EMBL:DQ854810 EMBL:DQ854811
EMBL:DQ854812 EMBL:BC126228 EMBL:BC136497 EMBL:GU138372
IPI:IPI00165074 IPI:IPI00215633 IPI:IPI00215634 IPI:IPI00215635
IPI:IPI00886819 IPI:IPI00909178 IPI:IPI00915914 IPI:IPI00943354
RefSeq:NP_001243200.1 RefSeq:NP_001243201.1 RefSeq:NP_055403.2
RefSeq:NP_955457.1 UniGene:Hs.274264 ProteinModelPortal:Q9NZR4
SMR:Q9NZR4 STRING:Q9NZR4 PhosphoSite:Q9NZR4 DMDM:25009572
PRIDE:Q9NZR4 Ensembl:ENST00000376707 Ensembl:ENST00000376709
Ensembl:ENST00000398332 Ensembl:ENST00000409285
Ensembl:ENST00000409958 Ensembl:ENST00000424574
Ensembl:ENST00000429762 Ensembl:ENST00000444511
Ensembl:ENST00000451258 GeneID:30813 KEGG:hsa:30813 UCSC:uc002wuf.3
UCSC:uc002wug.1 UCSC:uc010gdd.2 UCSC:uc010gdf.2
GeneCards:GC20M025051 HGNC:HGNC:12723 MIM:122000 MIM:148300
MIM:605020 MIM:614195 neXtProt:NX_Q9NZR4 Orphanet:2335
PharmGKB:PA37334 InParanoid:Q9NZR4 PhylomeDB:Q9NZR4
GenomeRNAi:30813 NextBio:52864 Bgee:Q9NZR4 CleanEx:HS_VSX1
Genevestigator:Q9NZR4 GermOnline:ENSG00000100987 Uniprot:Q9NZR4
Length = 365
Score = 151 (58.2 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF+++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK+ + SV
Sbjct: 175 QLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGS---SV 231
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 232 MAEYGLYGAMVRHCIP 247
>UNIPROTKB|I3LGC8 [details] [associations]
symbol:VSX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 GO:GO:0060040 GO:GO:0042551
InterPro:IPR023339 PROSITE:PS51496 OMA:WGSDHLK EMBL:FP565328
Ensembl:ENSSSCT00000025097 Uniprot:I3LGC8
Length = 365
Score = 151 (58.2 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF+++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK+ + SV
Sbjct: 175 QLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGS---SV 231
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 232 MAEYGLYGAMVRHCIP 247
>UNIPROTKB|Q0IH87 [details] [associations]
symbol:pax3-b "Paired box protein Pax-3-B" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=IGI]
[GO:0014029 "neural crest formation" evidence=IGI;IMP] [GO:0014034
"neural crest cell fate commitment" evidence=IMP] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IGI] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048785 "hatching gland development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0005634 GO:GO:0008543
GO:GO:0045893 GO:GO:0007399 GO:GO:0016055 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0014034 KO:K09381
HOVERGEN:HBG009115 GO:GO:0048785 InterPro:IPR022106 Pfam:PF12360
EMBL:AY757359 EMBL:AY725268 EMBL:BC123263 RefSeq:NP_001088994.1
UniGene:Xl.54870 GeneID:496377 KEGG:xla:496377 CTD:496377
Xenbase:XB-GENE-6252072 Uniprot:Q0IH87
Length = 483
Score = 153 (58.9 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 42/96 (43%), Positives = 50/96 (52%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQE--KQLQ--KA 49
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ QL
Sbjct: 229 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNH 288
Query: 50 LTPSVIP-TCNGAMMRNIYPTTSRGYQPYPHPNTIN 84
L P P T A+ Y + YQP P ++
Sbjct: 289 LIPGAFPPTAMPALPT--YQLSETSYQPTSIPQAVS 322
>UNIPROTKB|Q9GLL9 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9823 "Sus scrofa" [GO:0060126 "somatotropin secreting cell
differentiation" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048850 "hypophysis
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0021979 "hypothalamus cell differentiation"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043066 GO:GO:0016477 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001568
GO:GO:0009953 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 CTD:5626 HOVERGEN:HBG053691 KO:K09327
GO:GO:0048850 OMA:TCFPHPY EMBL:AF232676 EMBL:AB187272 EMBL:EF188259
RefSeq:NP_001001263.1 UniGene:Ssc.15921 UniGene:Ssc.86965
ProteinModelPortal:Q9GLL9 SMR:Q9GLL9 Ensembl:ENSSSCT00000028015
GeneID:397280 KEGG:ssc:397280 Uniprot:Q9GLL9
Length = 226
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL +LE+AF ++ YPDI+ RE LA QVWFQNRRAK RKQE+ L + L
Sbjct: 80 QLEQLESAFGRNQYPDIWAREGLARDTGLSEARIQVWFQNRRAKQRKQERSLLQPLAHLS 139
Query: 55 IPTCNGAMMRN-----IYPTTSRGYQPYPHP 80
T +G + YPT +PHP
Sbjct: 140 PATFSGFLPEPPACPYSYPTPPPPMTCFPHP 170
>UNIPROTKB|E9PTF1 [details] [associations]
symbol:Prop1 "Protein Prop1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:628759 GO:GO:0043066 GO:GO:0016477 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001568
GO:GO:0009953 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 GO:GO:0048850 OMA:TCFPHPY
IPI:IPI00194856 Ensembl:ENSRNOT00000004872 Uniprot:E9PTF1
Length = 223
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 41/92 (44%), Positives = 53/92 (57%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL +LE+AF ++ YPDI+ RE LA QVWFQNRRAK RKQE+ L + T +
Sbjct: 77 QLGQLESAFGRNQYPDIWVREGLAQDTGLSEARIQVWFQNRRAKQRKQERSLLQP-TAHL 135
Query: 55 IP-TCNGAMMRNI-YP---TTSRGYQP-YPHP 80
P T +G + + YP TT P +PHP
Sbjct: 136 SPATFSGFLSESSPYPYSYTTPPPPVPCFPHP 167
>UNIPROTKB|Q28DP6 [details] [associations]
symbol:pax3 "Paired box protein Pax-3" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0008543 "fibroblast growth factor receptor signaling pathway"
evidence=ISS] [GO:0014029 "neural crest formation" evidence=ISS]
[GO:0014034 "neural crest cell fate commitment" evidence=ISS]
[GO:0016055 "Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0048785 "hatching gland development"
evidence=ISS] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
GO:GO:0008543 GO:GO:0045893 GO:GO:0007399 GO:GO:0016055
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0014034
eggNOG:NOG326044 KO:K09381 HOVERGEN:HBG009115 GO:GO:0048785
InterPro:IPR022106 Pfam:PF12360 CTD:5077 HOGENOM:HOG000230939
EMBL:CR855399 RefSeq:NP_001006776.2 UniGene:Str.44149 STRING:Q28DP6
GeneID:448464 KEGG:xtr:448464 Xenbase:XB-GENE-482740 Bgee:Q28DP6
Uniprot:Q28DP6
Length = 461
Score = 152 (58.6 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 40/95 (42%), Positives = 48/95 (50%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQE--KQLQ--KA 49
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ QL
Sbjct: 206 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNH 265
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNTIN 84
L P P + Y + YQP P ++
Sbjct: 266 LIPGAFPPAAMPALPT-YQLSETSYQPTSIPQAVS 299
>RGD|1305667 [details] [associations]
symbol:Vsx1 "visual system homeobox 1" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007601
"visual perception" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0042551 "neuron maturation"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048666 "neuron development" evidence=ISO]
[GO:0060040 "retinal bipolar neuron differentiation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1305667 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR023339
PROSITE:PS51496 IPI:IPI00877372 Ensembl:ENSRNOT00000009723
UCSC:RGD:1305667 Uniprot:D3ZV45
Length = 360
Score = 150 (57.9 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF ++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK+ + SV
Sbjct: 179 QLEELEKAFGEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGS---SV 235
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 236 MAEYGLYGAMVRHCIP 251
>UNIPROTKB|Q645N4 [details] [associations]
symbol:pax3-a "Paired box protein Pax-3-A" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=IGI]
[GO:0014029 "neural crest formation" evidence=IGI;IMP] [GO:0014034
"neural crest cell fate commitment" evidence=IGI;IMP] [GO:0016055
"Wnt receptor signaling pathway" evidence=IGI] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048785 "hatching gland development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0005634 GO:GO:0008543
GO:GO:0045893 GO:GO:0007399 GO:GO:0016055 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601 GO:GO:0014034
KO:K09381 HOVERGEN:HBG009115 EMBL:AY757358 EMBL:AY725269
EMBL:BC108573 RefSeq:NP_001088993.1 UniGene:Xl.49495
ProteinModelPortal:Q645N4 SMR:Q645N4 GeneID:496376 KEGG:xla:496376
CTD:496376 Xenbase:XB-GENE-482744 GO:GO:0048785 InterPro:IPR022106
Pfam:PF12360 Uniprot:Q645N4
Length = 484
Score = 152 (58.6 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 40/95 (42%), Positives = 48/95 (50%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQE--KQLQ--KA 49
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ QL
Sbjct: 230 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNH 289
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNTIN 84
L P P + Y + YQP P ++
Sbjct: 290 LIPGAFPPAAMPALPT-YQLSETSYQPTSIPQAVS 323
>UNIPROTKB|E1BXC6 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
gallus" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0001709
"cell fate determination" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007435 "salivary gland morphogenesis" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032808 "lacrimal gland
development" evidence=IEA] [GO:0033365 "protein localization to
organelle" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048505 "regulation of timing of cell differentiation"
evidence=IEA] [GO:0048596 "embryonic camera-type eye morphogenesis"
evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0061072 "iris morphogenesis" evidence=IEA]
[GO:0061303 "cornea development in camera-type eye" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0070412 "R-SMAD
binding" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0009611 GO:GO:0045944
GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030334
GO:GO:0000790 GO:GO:0000981 GO:GO:0033365 GO:GO:0050680
GO:GO:0000979 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
GO:GO:0023019 GO:GO:0048505 GeneTree:ENSGT00680000099553
EMBL:AADN02040161 EMBL:AC140946 IPI:IPI00602476
ProteinModelPortal:E1BXC6 SMR:E1BXC6 Ensembl:ENSGALT00000019804
ArrayExpress:E1BXC6 Uniprot:E1BXC6
Length = 286
Score = 147 (56.8 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 84 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 143
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 144 NTPSHIPISSS------FSTSV--YQPIPQPTT 168
>UNIPROTKB|G3V4N4 [details] [associations]
symbol:PAX6 "Paired box gene 6 (Aniridia, keratitis),
isoform CRA_b" species:9606 "Homo sapiens" [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=IEA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0001709 "cell fate
determination" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0002088 "lens development in
camera-type eye" evidence=IEA] [GO:0003322 "pancreatic A cell
development" evidence=IEA] [GO:0003680 "AT DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 EMBL:CH471064
GO:GO:0007435 GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0030334 GO:GO:0000790 GO:GO:0006366
GO:GO:0000981 GO:GO:0033365 GO:GO:0021983 GO:GO:0050680
GO:GO:0000979 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
GO:GO:0002052 GO:GO:0009950 GO:GO:0021797 GO:GO:0048596
GO:GO:0023019 GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796
GO:GO:0021913 GO:GO:0032808 GO:GO:0021798 GO:GO:0048505
GO:GO:0021905 GO:GO:0048708 GO:GO:0021912 GO:GO:0021902
GO:GO:0021778 GO:GO:0003322 GO:GO:0021918 EMBL:Z95332
UniGene:Hs.270303 UniGene:Hs.611376 HGNC:HGNC:8620 SMR:G3V4N4
Ensembl:ENST00000470027 Ensembl:ENST00000494377 Uniprot:G3V4N4
Length = 286
Score = 147 (56.8 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 84 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 143
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 144 NTPSHIPISSS------FSTSV--YQPIPQPTT 168
>UNIPROTKB|A6NLG4 [details] [associations]
symbol:SHOX2 "cDNA FLJ38019 fis, clone CTONG2012758, highly
similar to Short stature homeobox protein 2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471052
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 UniGene:Hs.55967 HGNC:HGNC:10854
HOVERGEN:HBG007233 NextBio:25151 EMBL:AC112502 EMBL:AK095338
IPI:IPI01024865 SMR:A6NLG4 STRING:A6NLG4 Ensembl:ENST00000441443
Ensembl:ENST00000490689 Uniprot:A6NLG4
Length = 190
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE QL K +
Sbjct: 21 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGV 77
>UNIPROTKB|H0YJ32 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 HGNC:HGNC:10854
EMBL:AC112502 Ensembl:ENST00000555977 Uniprot:H0YJ32
Length = 178
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE QL K +
Sbjct: 54 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGV 110
>RGD|1310201 [details] [associations]
symbol:Alx4 "ALX homeobox 4" species:10116 "Rattus norvegicus"
[GO:0001942 "hair follicle development" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007389 "pattern
specification process" evidence=ISO] [GO:0007517 "muscle organ
development" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0009791 "post-embryonic development" evidence=ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISO] [GO:0035108 "limb morphogenesis" evidence=ISO]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=ISO]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048565 "digestive
tract development" evidence=ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] [GO:0060021 "palate development"
evidence=ISO] [GO:0071837 "HMG box domain binding" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:1310201 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00563344
Ensembl:ENSRNOT00000047661 UCSC:RGD:1310201 Uniprot:D4A4C2
Length = 324
Score = 148 (57.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 32/59 (54%), Positives = 41/59 (69%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALT 51
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ Q+Q+ T
Sbjct: 213 QLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRT 271
>UNIPROTKB|Q9GMA3 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104013 GO:GO:0060040
GO:GO:0042551 eggNOG:NOG237888 HOGENOM:HOG000115909
InterPro:IPR023339 PROSITE:PS51496 EMBL:AF251032 IPI:IPI00716722
RefSeq:NP_777192.1 UniGene:Bt.5555 ProteinModelPortal:Q9GMA3
SMR:Q9GMA3 PRIDE:Q9GMA3 Ensembl:ENSBTAT00000004329 GeneID:286802
KEGG:bta:286802 CTD:30813 HOVERGEN:HBG036251 InParanoid:Q9GMA3
KO:K09335 OMA:WGSDHLK OrthoDB:EOG4907B0 NextBio:20806456
Uniprot:Q9GMA3
Length = 365
Score = 149 (57.5 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF+++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK+ + SV
Sbjct: 175 QLEELEKAFSEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKRWGGS---SV 231
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 232 MAEYGLYGAMVRHCIP 247
>UNIPROTKB|G3V4M3 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:Z83307 EMBL:Z95332 HGNC:HGNC:8620
ProteinModelPortal:G3V4M3 SMR:G3V4M3 Ensembl:ENST00000531633
ArrayExpress:G3V4M3 Bgee:G3V4M3 Uniprot:G3V4M3
Length = 302
Score = 147 (56.8 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 49 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 108
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 109 NTPSHIPISSS------FSTSV--YQPIPQPTT 133
>ZFIN|ZDB-GENE-980526-400 [details] [associations]
symbol:otx1b "orthodenticle homolog 1b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0003406 "retinal pigment epithelium development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR003025 InterPro:IPR003026
InterPro:IPR009057 InterPro:IPR013851 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255 PRINTS:PR01256
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-400 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GeneTree:ENSGT00700000104128 HOGENOM:HOG000082677
HOVERGEN:HBG004028 eggNOG:NOG245767 KO:K09326 OrthoDB:EOG4868DB
EMBL:D26172 EMBL:U14591 EMBL:BC045290 IPI:IPI00483824 PIR:I51751
RefSeq:NP_571325.2 UniGene:Dr.30626 ProteinModelPortal:Q91994
SMR:Q91994 STRING:Q91994 PRIDE:Q91994 Ensembl:ENSDART00000064083
GeneID:30500 KEGG:dre:30500 CTD:30500 InParanoid:Q7ZU54 OMA:PMTASSM
NextBio:20806889 Bgee:Q91994 Uniprot:Q91994
Length = 323
Score = 121 (47.7 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL LEA FAK+ YPDI+ REE+A+ QVWF+NRRAK R+Q++
Sbjct: 49 QLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Score = 46 (21.3 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 19/75 (25%), Positives = 28/75 (37%)
Query: 49 ALTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSA 108
+L V P+ M R++ T S Y P P+ T G L+
Sbjct: 178 SLPEPVAPSNTSCMQRSVSGTASSTY-PMPYNQTTGYSQGYPTPSGSYFSGVDCGSYLAP 236
Query: 109 LRMNSSHHSNLATPM 123
M+S HH + +PM
Sbjct: 237 --MHSHHHPHQLSPM 249
>UNIPROTKB|F1MC18 [details] [associations]
symbol:ALX3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IEA] [GO:0007389
"pattern specification process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0042981 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0035116
GO:GO:0035115 GO:GO:0048704 GeneTree:ENSGT00700000104013 CTD:257
KO:K09323 OMA:PYSHPHG GO:GO:0007389 EMBL:DAAA02007556
IPI:IPI00714755 RefSeq:NP_001179482.1 UniGene:Bt.61185 PRIDE:F1MC18
Ensembl:ENSBTAT00000027924 GeneID:522085 KEGG:bta:522085
NextBio:20873443 Uniprot:F1MC18
Length = 343
Score = 148 (57.2 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALTP 52
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ ++Q+ P
Sbjct: 164 QLEELEKVFQKTHYPDVYAREQLAVRTDLTEARVQVWFQNRRAKWRKRERYGKIQEGRNP 223
>RGD|3674 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA;ISO] [GO:0002053 "positive regulation of mesenchymal
cell proliferation" evidence=IEA;ISO] [GO:0002062 "chondrocyte
differentiation" evidence=ISO] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0003170 "heart valve development"
evidence=IEA;ISO] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA;ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA;ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA;ISO] [GO:0048598 "embryonic
morphogenesis" evidence=ISO] [GO:0048743 "positive regulation of
skeletal muscle fiber development" evidence=IEA;ISO] [GO:0050772
"positive regulation of axonogenesis" evidence=IEA;ISO] [GO:0060272
"embryonic skeletal joint morphogenesis" evidence=IEA;ISO]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA;ISO] [GO:0060415 "muscle tissue
morphogenesis" evidence=IEA;ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3674
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272
GO:GO:0002053 GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 143 (55.4 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE QL K +
Sbjct: 56 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGV 112
>UNIPROTKB|O35750 [details] [associations]
symbol:Shox2 "Short stature homeobox protein 2"
species:10116 "Rattus norvegicus" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3674 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0030326 GO:GO:0050772 GO:GO:0032330 GO:GO:0001649
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 143 (55.4 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE QL K +
Sbjct: 56 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGV 112
>UNIPROTKB|E2RC05 [details] [associations]
symbol:OTP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 EMBL:AAEX03002130
Ensembl:ENSCAFT00000014646 Uniprot:E2RC05
Length = 325
Score = 116 (45.9 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTP-S 53
QL ELE +FAK+HYPDI+ REELA+ QV RRAK++K++K P +
Sbjct: 115 QLNELERSFAKTHYPDIFMREELALRIGLTESRVQVHRACRRAKWKKRKKTTNLCRAPGT 174
Query: 54 VIPT 57
++PT
Sbjct: 175 LLPT 178
Score = 51 (23.0 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 15/60 (25%), Positives = 24/60 (40%)
Query: 59 NGA-MMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSSHHS 117
NGA + ++Y G P P N L + D W S+++LR + H+
Sbjct: 260 NGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDSSDVWRGTSIASLRRKALEHT 319
>FB|FBgn0030058 [details] [associations]
symbol:CG11294 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:AE014298 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
eggNOG:NOG39948 GeneTree:ENSGT00700000104256 EMBL:BT022199
RefSeq:NP_572500.1 UniGene:Dm.26524 SMR:Q9W3C6
EnsemblMetazoa:FBtr0071224 EnsemblMetazoa:FBtr0331456 GeneID:31807
KEGG:dme:Dmel_CG11294 UCSC:CG11294-RA FlyBase:FBgn0030058
InParanoid:Q9W3C6 OMA:MAGPFIS OrthoDB:EOG4DBRWV GenomeRNAi:31807
NextBio:775414 Uniprot:Q9W3C6
Length = 261
Score = 144 (55.7 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
+QL ELEA F K+HYPD++ REE+A+ QVWFQNRRAK+RKQ +
Sbjct: 34 QQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQAR 84
>UNIPROTKB|O95076 [details] [associations]
symbol:ALX3 "Homeobox protein aristaless-like 3"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007389 "pattern
specification process" evidence=IEA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0042981 EMBL:CH471122
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518
GO:GO:0048704 EMBL:AF008202 EMBL:AF008203 EMBL:AL160006
EMBL:BC112007 EMBL:BC113428 IPI:IPI00028290 RefSeq:NP_006483.2
UniGene:Hs.669953 ProteinModelPortal:O95076 SMR:O95076
STRING:O95076 PhosphoSite:O95076 PRIDE:O95076
Ensembl:ENST00000369792 GeneID:257 KEGG:hsa:257 UCSC:uc001dzb.3
CTD:257 GeneCards:GC01M110602 H-InvDB:HIX0023725 H-InvDB:HIX0159682
HGNC:HGNC:449 MIM:136760 MIM:606014 neXtProt:NX_O95076 Orphanet:250
PharmGKB:PA24754 eggNOG:NOG292934 HOVERGEN:HBG004213
InParanoid:O95076 KO:K09323 OMA:PYSHPHG OrthoDB:EOG40K810
PhylomeDB:O95076 GenomeRNAi:257 NextBio:1013 Bgee:O95076
CleanEx:HS_ALX3 Genevestigator:O95076 GermOnline:ENSG00000156150
GO:GO:0007389 Uniprot:O95076
Length = 343
Score = 147 (56.8 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALTP 52
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ ++Q+ P
Sbjct: 164 QLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERYGKIQEGRNP 223
>MGI|MGI:1277097 [details] [associations]
symbol:Alx3 "aristaless-like homeobox 3" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IGI]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IGI]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IGI]
[GO:0042981 "regulation of apoptotic process" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:1277097 GO:GO:0005634 GO:GO:0042981 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518 GO:GO:0048704
CTD:257 eggNOG:NOG292934 HOVERGEN:HBG004213 KO:K09323 OMA:PYSHPHG
OrthoDB:EOG40K810 GO:GO:0007389 EMBL:U96109 IPI:IPI00115634
RefSeq:NP_031467.1 UniGene:Mm.10112 ProteinModelPortal:O70137
SMR:O70137 STRING:O70137 PhosphoSite:O70137 PRIDE:O70137
DNASU:11694 Ensembl:ENSMUST00000014747 GeneID:11694 KEGG:mmu:11694
InParanoid:O70137 NextBio:279353 Bgee:O70137 CleanEx:MM_ALX3
Genevestigator:O70137 GermOnline:ENSMUSG00000014603 Uniprot:O70137
Length = 343
Score = 147 (56.8 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALTP 52
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ ++Q+ P
Sbjct: 164 QLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERYGKMQEGRNP 223
>RGD|1359270 [details] [associations]
symbol:Alx3 "ALX homeobox 3" species:10116 "Rattus norvegicus"
[GO:0007389 "pattern specification process" evidence=ISO]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AY488087 RGD:1359270 GO:GO:0005634 GO:GO:0042981 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0035116
GO:GO:0035115 HOGENOM:HOG000231518 GO:GO:0048704 CTD:257
eggNOG:NOG292934 HOVERGEN:HBG004213 KO:K09323 OrthoDB:EOG40K810
GO:GO:0007389 IPI:IPI00421290 RefSeq:NP_001007013.1
UniGene:Rn.18878 ProteinModelPortal:Q6RW14 SMR:Q6RW14 GeneID:365900
KEGG:rno:365900 InParanoid:Q6RW14 NextBio:688313
ArrayExpress:Q6RW14 Genevestigator:Q6RW14 Uniprot:Q6RW14
Length = 343
Score = 147 (56.8 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEK--QLQKALTP 52
QL ELE F K+HYPD+Y RE+LA+ QVWFQNRRAK+RK+E+ ++Q+ P
Sbjct: 164 QLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERYGKIQEGRNP 223
>FB|FBgn0025334 [details] [associations]
symbol:PHDP "Putative homeodomain protein" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE013599 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
GeneTree:ENSGT00700000104256 FlyBase:FBgn0025334 EMBL:BT028839
RefSeq:NP_523834.1 UniGene:Dm.5689 SMR:Q9W1H7 IntAct:Q9W1H7
MINT:MINT-1561397 STRING:Q9W1H7 EnsemblMetazoa:FBtr0072224
GeneID:37788 KEGG:dme:Dmel_CG11182 UCSC:CG11182-RA CTD:37788
InParanoid:Q9W1H7 OMA:YKLRANE GenomeRNAi:37788 NextBio:805410
Uniprot:Q9W1H7
Length = 220
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 30/50 (60%), Positives = 35/50 (70%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE F ++HYPDIY REE+A QVWFQNRRAK+RKQE+
Sbjct: 123 QLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQER 172
>UNIPROTKB|Q9IAL2 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG237888
HOGENOM:HOG000115909 InterPro:IPR023339 PROSITE:PS51496 CTD:30813
HOVERGEN:HBG036251 KO:K09335 OrthoDB:EOG4907B0 EMBL:AF178670
IPI:IPI00577521 RefSeq:NP_990100.1 UniGene:Gga.3158
ProteinModelPortal:Q9IAL2 SMR:Q9IAL2 GeneID:395537 KEGG:gga:395537
InParanoid:Q9IAL2 NextBio:20815614 Uniprot:Q9IAL2
Length = 350
Score = 147 (56.8 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF ++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK ++ SV
Sbjct: 168 QLEELEKAFNEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKCWGRS---SV 224
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 225 MAEYGLYGAMVRHSIP 240
>ZFIN|ZDB-GENE-010403-1 [details] [associations]
symbol:crx "cone-rod homeobox" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001654 "eye
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0046671 "negative regulation of retinal cell
programmed cell death" evidence=IMP] [GO:0042462 "eye photoreceptor
cell development" evidence=IMP] InterPro:IPR001356
InterPro:IPR003025 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-010403-1 GO:GO:0005634 GO:GO:0003677 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0046671 GO:GO:0042462 CTD:1406 GeneTree:ENSGT00700000104128
HOGENOM:HOG000082677 HOVERGEN:HBG004028 HSSP:P06601
eggNOG:NOG245767 EMBL:BX927323 EMBL:BC059653 EMBL:AF503443
EMBL:AY703035 EMBL:AY703034 EMBL:AY703038 EMBL:AY703036
EMBL:AY703037 IPI:IPI00500108 RefSeq:NP_694419.1 UniGene:Dr.14325
SMR:Q8JIZ3 STRING:Q8JIZ3 Ensembl:ENSDART00000037879 GeneID:81881
KEGG:dre:81881 InParanoid:Q8JIZ3 OMA:DYKDQQA NextBio:20934175
Uniprot:Q8JIZ3
Length = 281
Score = 122 (48.0 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQ 45
QL LEA F K+ YPDI+ REE+A+ QVWF+NRRAK R+Q++Q
Sbjct: 49 QLDILEALFTKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQ 99
Score = 41 (19.5 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 49 ALTPSVIPTCNGAMMRNIYPT-TSRGY 74
AL+P +P+ G++ ++ P+ +S+GY
Sbjct: 219 ALSPLTVPSMGGSLSQS--PSLSSQGY 243
>UNIPROTKB|F1Q361 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 OMA:SNHCPVH
EMBL:AAEX03026084 Ensembl:ENSCAFT00000017459 Uniprot:F1Q361
Length = 291
Score = 145 (56.1 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 36/76 (47%), Positives = 44/76 (57%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL--- 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE Q+ K +
Sbjct: 126 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILG 185
Query: 51 TPSVIPTCNGAMMRNI 66
T S + C A N+
Sbjct: 186 TASHLDACRVAPYVNM 201
>UNIPROTKB|K7GS77 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
EMBL:FP015869 GeneID:100520816 RefSeq:XP_003134962.1
Ensembl:ENSSSCT00000035048 Uniprot:K7GS77
Length = 292
Score = 145 (56.1 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 36/76 (47%), Positives = 44/76 (57%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL--- 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE Q+ K +
Sbjct: 127 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILG 186
Query: 51 TPSVIPTCNGAMMRNI 66
T S + C A N+
Sbjct: 187 TASHLDACRVAPYVNM 202
>UNIPROTKB|D3ZZT5 [details] [associations]
symbol:Pax6 "Paired box protein Pax-6" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 RGD:3258 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
IPI:IPI00207588 Ensembl:ENSRNOT00000006328 ArrayExpress:D3ZZT5
Uniprot:D3ZZT5
Length = 366
Score = 147 (56.8 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 206 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 265
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 266 NTPSHIPISSS------FSTSV--YQPIPQPTT 290
>UNIPROTKB|F1SG33 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 OMA:SNHCPVH
EMBL:FP015869 RefSeq:XP_003134961.1 Ensembl:ENSSSCT00000013224
GeneID:100520816 KEGG:ssc:100520816 Uniprot:F1SG33
Length = 300
Score = 145 (56.1 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 36/76 (47%), Positives = 44/76 (57%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL--- 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE Q+ K +
Sbjct: 127 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILG 186
Query: 51 TPSVIPTCNGAMMRNI 66
T S + C A N+
Sbjct: 187 TASHLDACRVAPYVNM 202
>UNIPROTKB|H0YMR3 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YMR3 SMR:H0YMR3
Ensembl:ENST00000560001 Bgee:H0YMR3 Uniprot:H0YMR3
Length = 279
Score = 144 (55.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 35/80 (43%), Positives = 45/80 (56%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE Q+ K +
Sbjct: 127 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGV--- 183
Query: 54 VIPTCNGAMMRNIYPTTSRG 73
++ T N + P + G
Sbjct: 184 ILGTANHLDACRVAPYVNMG 203
>ZFIN|ZDB-GENE-051030-21 [details] [associations]
symbol:shox "short stature homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-051030-21 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104279 EMBL:BX294669 IPI:IPI00742503
Ensembl:ENSDART00000029238 ArrayExpress:F1Q5T6 Bgee:F1Q5T6
Uniprot:F1Q5T6
Length = 304
Score = 145 (56.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 36/76 (47%), Positives = 44/76 (57%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL--- 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE Q+ K +
Sbjct: 119 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILG 178
Query: 51 TPSVIPTCNGAMMRNI 66
T S + C A N+
Sbjct: 179 TASHLDACRVAPYVNM 194
>UNIPROTKB|G3V3Q9 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:Z83307
EMBL:Z95332 HGNC:HGNC:8620 ProteinModelPortal:G3V3Q9 SMR:G3V3Q9
Ensembl:ENST00000533333 ArrayExpress:G3V3Q9 Bgee:G3V3Q9
Uniprot:G3V3Q9
Length = 377
Score = 147 (56.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 175 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 234
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 235 NTPSHIPISSS------FSTSV--YQPIPQPTT 259
>UNIPROTKB|J9NW39 [details] [associations]
symbol:ARX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
EMBL:AAEX03026212 EMBL:AAEX03026213 Ensembl:ENSCAFT00000048909
Uniprot:J9NW39
Length = 520
Score = 149 (57.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE AF K+HYPD++ REELA+ QVWFQNRRAK+RK+EK
Sbjct: 297 QLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 346
>UNIPROTKB|O15266 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
Orphanet:137693 eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331
OrthoDB:EOG41C6X2 EMBL:Y11536 EMBL:Y11535 EMBL:U82668 EMBL:U89331
EMBL:BX004827 IPI:IPI00005744 IPI:IPI00411417 RefSeq:NP_000442.1
RefSeq:NP_006874.1 UniGene:Hs.105932 ProteinModelPortal:O15266
SMR:O15266 IntAct:O15266 STRING:O15266 PhosphoSite:O15266
PRIDE:O15266 DNASU:6473 Ensembl:ENST00000334060
Ensembl:ENST00000381575 Ensembl:ENST00000381578
Ensembl:ENST00000554971 GeneID:6473 KEGG:hsa:6473 UCSC:uc004cph.1
UCSC:uc004cpi.3 CTD:6473 GeneCards:GC0XP000585 HGNC:HGNC:10853
MIM:127300 MIM:249700 MIM:300582 MIM:312865 MIM:400020
neXtProt:NX_O15266 Orphanet:2632 Orphanet:240 PharmGKB:PA134978644
InParanoid:O15266 OMA:SNHCPVH PhylomeDB:O15266 GenomeRNAi:6473
NextBio:25145 Bgee:O15266 CleanEx:HS_SHOX Genevestigator:O15266
Uniprot:O15266
Length = 292
Score = 144 (55.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 35/80 (43%), Positives = 45/80 (56%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE Q+ K +
Sbjct: 127 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGV--- 183
Query: 54 VIPTCNGAMMRNIYPTTSRG 73
++ T N + P + G
Sbjct: 184 ILGTANHLDACRVAPYVNMG 203
>MGI|MGI:1890816 [details] [associations]
symbol:Vsx1 "visual system homeobox 1 homolog (zebrafish)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007601 "visual perception"
evidence=IMP] [GO:0042551 "neuron maturation" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048666 "neuron development" evidence=IMP] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0060040 "retinal bipolar
neuron differentiation" evidence=IGI;IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1890816 GO:GO:0005634
GO:GO:0007601 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0050896 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 GO:GO:0060040 GO:GO:0042551
eggNOG:NOG237888 HOGENOM:HOG000115909 InterPro:IPR023339
PROSITE:PS51496 CTD:30813 HOVERGEN:HBG036251 KO:K09335 OMA:WGSDHLK
OrthoDB:EOG4907B0 EMBL:AY056825 EMBL:AF395732 EMBL:AF391757
EMBL:AF391758 EMBL:BC057647 IPI:IPI00125937 PIR:JC7750
RefSeq:NP_473409.1 UniGene:Mm.207061 ProteinModelPortal:Q91V10
SMR:Q91V10 STRING:Q91V10 PhosphoSite:Q91V10 PRIDE:Q91V10
Ensembl:ENSMUST00000046095 GeneID:114889 KEGG:mmu:114889
InParanoid:Q91V10 NextBio:368909 Bgee:Q91V10 CleanEx:MM_VSX1
Genevestigator:Q91V10 GermOnline:ENSMUSG00000033080 Uniprot:Q91V10
Length = 363
Score = 146 (56.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/76 (48%), Positives = 47/76 (61%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF ++HYPD+Y RE LA QVWFQNRRAK+RK+EK+ + SV
Sbjct: 182 QLEELEKAFGEAHYPDVYAREMLAAKTELPEDRIQVWFQNRRAKWRKREKRWGGS---SV 238
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 239 MAEYGLYGAMVRHCIP 254
>UNIPROTKB|P23760 [details] [associations]
symbol:PAX3 "Paired box protein Pax-3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007605 "sensory perception of sound"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
GO:GO:0006915 GO:GO:0007507 GO:GO:0008284 GO:GO:0008283
EMBL:CH471063 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0000122
GO:GO:0009887 GO:GO:0006366 GO:GO:0007517 GO:GO:0007605
GO:GO:0001843 GO:GO:0021527 GO:GO:0048663 GO:GO:0048066 MIM:268220
Orphanet:99756 GO:GO:0060594 eggNOG:NOG326044 KO:K09381
EMBL:AY633656 HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360
EMBL:AY251279 EMBL:AY251280 EMBL:AK291278 EMBL:AC010980
EMBL:AC012591 EMBL:BC063547 EMBL:BC101299 EMBL:BC101300
EMBL:BC101301 EMBL:BC101302 EMBL:BC114363 EMBL:U12263 EMBL:U12259
EMBL:U12258 EMBL:U12260 EMBL:U12262 EMBL:X15043 EMBL:X15252
EMBL:X15253 EMBL:Z29972 EMBL:Z29973 EMBL:Z29974 EMBL:S69369
EMBL:S69370 EMBL:S83614 EMBL:L10614 IPI:IPI00012896 IPI:IPI00219092
IPI:IPI00219093 IPI:IPI00375387 IPI:IPI00895878 PIR:I54276
PIR:I68547 PIR:S06960 RefSeq:NP_000429.2 RefSeq:NP_001120838.1
RefSeq:NP_039230.1 RefSeq:NP_852122.1 RefSeq:NP_852123.1
RefSeq:NP_852124.1 RefSeq:NP_852125.1 RefSeq:NP_852126.1
UniGene:Hs.42146 PDB:3CMY PDBsum:3CMY ProteinModelPortal:P23760
SMR:P23760 IntAct:P23760 MINT:MINT-202884 STRING:P23760
PhosphoSite:P23760 DMDM:1172022 PRIDE:P23760 DNASU:5077
Ensembl:ENST00000258387 Ensembl:ENST00000336840
Ensembl:ENST00000344493 Ensembl:ENST00000350526
Ensembl:ENST00000392069 Ensembl:ENST00000392070
Ensembl:ENST00000409551 Ensembl:ENST00000409828 GeneID:5077
KEGG:hsa:5077 UCSC:uc002vmw.2 UCSC:uc002vmz.2 UCSC:uc002vna.2
CTD:5077 GeneCards:GC02M223064 HGNC:HGNC:8617 HPA:CAB013466
MIM:122880 MIM:148820 MIM:193500 MIM:606597 neXtProt:NX_P23760
Orphanet:1529 Orphanet:894 Orphanet:896 PharmGKB:PA32957
HOGENOM:HOG000230939 OMA:VHQSTLP ChiTaRS:PAX3
EvolutionaryTrace:P23760 GenomeRNAi:5077 NextBio:19572
ArrayExpress:P23760 Bgee:P23760 CleanEx:HS_PAX3
Genevestigator:P23760 GermOnline:ENSG00000135903 Uniprot:P23760
Length = 479
Score = 148 (57.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/95 (42%), Positives = 48/95 (50%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQE--KQLQ--KA 49
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ QL
Sbjct: 229 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNH 288
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNTIN 84
L P P + Y + YQP P ++
Sbjct: 289 LIPGGFPPTAMPTLPT-YQLSETSYQPTSIPQAVS 322
>MGI|MGI:97487 [details] [associations]
symbol:Pax3 "paired box gene 3" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0001755 "neural crest
cell migration" evidence=IMP] [GO:0001843 "neural tube closure"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=TAS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007507 "heart development"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IGI] [GO:0021915
"neural tube development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0048066
"developmental pigmentation" evidence=IMP] [GO:0048663 "neuron fate
commitment" evidence=IGI] [GO:0060594 "mammary gland specification"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 MGI:MGI:97487
GO:GO:0008284 GO:GO:0008283 GO:GO:0001755 GO:GO:0043565
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 GO:GO:0055007 GO:GO:0001843 GO:GO:0035914
GO:GO:0021527 GO:GO:0048663 GO:GO:0048066 GO:GO:0060594
eggNOG:NOG326044 GeneTree:ENSGT00680000099553 KO:K09381
HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360 CTD:5077
HOGENOM:HOG000230939 ChiTaRS:PAX3 EMBL:X59358 EMBL:AK014337
EMBL:AK045018 EMBL:AK148354 EMBL:S66429 EMBL:S66433 IPI:IPI00625217
PIR:S15031 RefSeq:NP_001152992.1 RefSeq:NP_032807.3 UniGene:Mm.1371
ProteinModelPortal:P24610 SMR:P24610 IntAct:P24610
MINT:MINT-4653013 STRING:P24610 PhosphoSite:P24610 PRIDE:P24610
Ensembl:ENSMUST00000087086 GeneID:18505 KEGG:mmu:18505
UCSC:uc007bqb.2 NextBio:294224 Bgee:P24610 CleanEx:MM_PAX3
Genevestigator:P24610 GermOnline:ENSMUSG00000004872 Uniprot:P24610
Length = 479
Score = 148 (57.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/95 (42%), Positives = 48/95 (50%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQE--KQLQ--KA 49
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ QL
Sbjct: 229 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNH 288
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNTIN 84
L P P + Y + YQP P ++
Sbjct: 289 LIPGGFPPTAMPTLPT-YQLSETSYQPTSIPQAVS 322
>UNIPROTKB|F1MTX0 [details] [associations]
symbol:PAX3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060594 "mammary
gland specification" evidence=IEA] [GO:0048663 "neuron fate
commitment" evidence=IEA] [GO:0048066 "developmental pigmentation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
SMART:SM00389 GO:GO:0005634 GO:GO:0007507 GO:GO:0008284
GO:GO:0008283 GO:GO:0001755 GO:GO:0043565 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0003705 GO:GO:0000122 GO:GO:0007517 GO:GO:0001843
GO:GO:0021527 GO:GO:0048663 GO:GO:0048066 GO:GO:0060594
GeneTree:ENSGT00680000099553 KO:K09381 InterPro:IPR022106
Pfam:PF12360 CTD:5077 OMA:VHQSTLP EMBL:DAAA02006005 IPI:IPI01001137
RefSeq:NP_001193747.1 UniGene:Bt.112037 Ensembl:ENSBTAT00000013131
GeneID:540951 KEGG:bta:540951 NextBio:20878929 Uniprot:F1MTX0
Length = 484
Score = 148 (57.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/95 (42%), Positives = 48/95 (50%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQE--KQLQ--KA 49
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ QL
Sbjct: 229 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNH 288
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNTIN 84
L P P + Y + YQP P ++
Sbjct: 289 LIPGGFPPTAMPTLPT-YQLSETSYQPTAIPQAVS 322
>UNIPROTKB|F1NF66 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 EMBL:AADN02040161 EMBL:AC140946
IPI:IPI00589493 Ensembl:ENSGALT00000019805 ArrayExpress:F1NF66
Uniprot:F1NF66
Length = 422
Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 220 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 279
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 280 NTPSHIPISSS------FSTSV--YQPIPQPTT 304
>UNIPROTKB|Q1LZF1 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0050768 "negative regulation of neurogenesis" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0070412
"R-SMAD binding" evidence=IEA] [GO:0070410 "co-SMAD binding"
evidence=IEA] [GO:0061303 "cornea development in camera-type eye"
evidence=IEA] [GO:0061072 "iris morphogenesis" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
[GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA]
[GO:0048505 "regulation of timing of cell differentiation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0042462 "eye
photoreceptor cell development" evidence=IEA] [GO:0035035 "histone
acetyltransferase binding" evidence=IEA] [GO:0033365 "protein
localization to organelle" evidence=IEA] [GO:0032808 "lacrimal
gland development" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030216
"keratinocyte differentiation" evidence=IEA] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0021918 "regulation of transcription from RNA
polymerase II promoter involved in somatic motor neuron fate
commitment" evidence=IEA] [GO:0021913 "regulation of transcription
from RNA polymerase II promoter involved in ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021905
"forebrain-midbrain boundary formation" evidence=IEA] [GO:0021902
"commitment of neuronal cell to specific neuron type in forebrain"
evidence=IEA] [GO:0021798 "forebrain dorsal/ventral pattern
formation" evidence=IEA] [GO:0021797 "forebrain anterior/posterior
pattern specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021778 "oligodendrocyte cell
fate specification" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0009950 "dorsal/ventral axis
specification" evidence=IEA] [GO:0009611 "response to wounding"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007435 "salivary gland morphogenesis"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003322 "pancreatic A cell
development" evidence=IEA] [GO:0002088 "lens development in
camera-type eye" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0030216 GO:GO:0009611 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030334
GO:GO:0000790 GO:GO:0000981 GO:GO:0033365 GO:GO:0001568
GO:GO:0004842 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0061303 GO:GO:0030858 GO:GO:0007224 GO:GO:0050768
GO:GO:0001709 GO:GO:0002052 GO:GO:0009950 GO:GO:0021797
GO:GO:0048596 GO:GO:0023019 GO:GO:0002088 GO:GO:0042462
GO:GO:0021796 GO:GO:0021913 GO:GO:0032808 GO:GO:0021798
GO:GO:0048505 GO:GO:0021905 eggNOG:NOG326044
GeneTree:ENSGT00680000099553 GO:GO:0048708 GO:GO:0061072
GO:GO:0021912 HOVERGEN:HBG009115 HOGENOM:HOG000230939 EMBL:BC116038
IPI:IPI00686718 RefSeq:NP_001035735.1 UniGene:Bt.11759
ProteinModelPortal:Q1LZF1 SMR:Q1LZF1 STRING:Q1LZF1 PRIDE:Q1LZF1
Ensembl:ENSBTAT00000005994 GeneID:286857 KEGG:bta:286857 CTD:5080
InParanoid:Q1LZF1 KO:K08031 OMA:NGQTGTW OrthoDB:EOG47PX63
NextBio:20806506 ArrayExpress:Q1LZF1 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 Uniprot:Q1LZF1
Length = 422
Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 220 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 279
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 280 NTPSHIPISSS------FSTSV--YQPIPQPTT 304
>UNIPROTKB|P26367 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0001709 "cell fate determination" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0002088
"lens development in camera-type eye" evidence=IEA] [GO:0003680 "AT
DNA binding" evidence=IEA] [GO:0003690 "double-stranded DNA
binding" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0021778
"oligodendrocyte cell fate specification" evidence=IEA] [GO:0021796
"cerebral cortex regionalization" evidence=IEA] [GO:0021797
"forebrain anterior/posterior pattern specification" evidence=IEA]
[GO:0021798 "forebrain dorsal/ventral pattern formation"
evidence=IEA] [GO:0021902 "commitment of neuronal cell to specific
neuron type in forebrain" evidence=IEA] [GO:0021905
"forebrain-midbrain boundary formation" evidence=IEA] [GO:0021912
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord motor neuron fate specification"
evidence=IEA] [GO:0021913 "regulation of transcription from RNA
polymerase II promoter involved in ventral spinal cord interneuron
specification" evidence=IEA] [GO:0021918 "regulation of
transcription from RNA polymerase II promoter involved in somatic
motor neuron fate commitment" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0048505 "regulation of
timing of cell differentiation" evidence=IEA] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IEA] [GO:0048708
"astrocyte differentiation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IMP] [GO:0061072 "iris morphogenesis" evidence=IMP]
[GO:0061303 "cornea development in camera-type eye" evidence=IMP]
[GO:0001568 "blood vessel development" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0050768 "negative regulation of neurogenesis" evidence=ISS]
[GO:0048663 "neuron fate commitment" evidence=NAS] [GO:0009611
"response to wounding" evidence=IEP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=TAS]
[GO:0007601 "visual perception" evidence=TAS] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0009887 "organ morphogenesis"
evidence=TAS] [GO:0007417 "central nervous system development"
evidence=TAS] [GO:0001654 "eye development" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070412 "R-SMAD
binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0000981 "sequence-specific DNA binding
RNA polymerase II transcription factor activity" evidence=IDA]
[GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
binding" evidence=IDA] [GO:0003322 "pancreatic A cell development"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0019901 "protein kinase binding" evidence=ISS] [GO:0035035
"histone acetyltransferase binding" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0019901
GO:GO:0009611 GO:GO:0007435 GO:GO:0007601 GO:GO:0045944
GO:GO:0045665 GO:GO:0007417 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042593 Orphanet:194 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0000981 GO:GO:0033365
GO:GO:0001568 GO:GO:0004842 GO:GO:0008134 GO:GO:0021983
GO:GO:0050680 GO:GO:0000979 GO:GO:0061303 GO:GO:0035035
GO:GO:0030858 GO:GO:0007224 GO:GO:0050768 GO:GO:0001709
GO:GO:0002052 GO:GO:0048663 GO:GO:0009950 GO:GO:0021797
Orphanet:893 GO:GO:0048596 GO:GO:0023019 GO:GO:0002088
GO:GO:0042462 MIM:604229 Orphanet:708 EMBL:Z83307 GO:GO:0021796
GO:GO:0021913 GO:GO:0032808 GO:GO:0021798 GO:GO:0048505
GO:GO:0021905 eggNOG:NOG326044 GO:GO:0048708 GO:GO:0061072
GO:GO:0021912 HOVERGEN:HBG009115 CTD:5080 KO:K08031 OMA:NGQTGTW
OrthoDB:EOG47PX63 GO:GO:0021902 GO:GO:0021778 GO:GO:0003322
GO:GO:0021918 EMBL:M77844 EMBL:M93650 EMBL:AY047583 EMBL:BX640762
EMBL:Z95332 EMBL:BC011953 IPI:IPI00218800 IPI:IPI00449071
PIR:A56674 RefSeq:NP_000271.1 RefSeq:NP_001121084.1
RefSeq:NP_001245391.1 RefSeq:NP_001245392.1 RefSeq:NP_001245393.1
RefSeq:NP_001245394.1 RefSeq:NP_001595.2 UniGene:Hs.270303
UniGene:Hs.611376 PDB:2CUE PDB:6PAX PDBsum:2CUE PDBsum:6PAX
ProteinModelPortal:P26367 SMR:P26367 IntAct:P26367
MINT:MINT-1465118 STRING:P26367 PhosphoSite:P26367 DMDM:6174889
PRIDE:P26367 DNASU:5080 Ensembl:ENST00000241001
Ensembl:ENST00000379107 Ensembl:ENST00000379109
Ensembl:ENST00000379111 Ensembl:ENST00000379115
Ensembl:ENST00000379123 Ensembl:ENST00000379129
Ensembl:ENST00000379132 Ensembl:ENST00000419022 GeneID:5080
KEGG:hsa:5080 UCSC:uc001mtd.4 GeneCards:GC11M031806 HGNC:HGNC:8620
HPA:CAB034143 HPA:HPA030775 MIM:106210 MIM:120200 MIM:120430
MIM:136520 MIM:148190 MIM:165550 MIM:206700 MIM:607108
neXtProt:NX_P26367 Orphanet:1065 Orphanet:2334 Orphanet:2253
Orphanet:250923 Orphanet:137902 Orphanet:35737 PharmGKB:PA32960
EvolutionaryTrace:P26367 GenomeRNAi:5080 NextBio:19596
ArrayExpress:P26367 Bgee:P26367 CleanEx:HS_PAX6
Genevestigator:P26367 GermOnline:ENSG00000007372 Uniprot:P26367
Length = 422
Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 220 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 279
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 280 NTPSHIPISSS------FSTSV--YQPIPQPTT 304
>UNIPROTKB|F2Z5M7 [details] [associations]
symbol:PAX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0061303 "cornea development in
camera-type eye" evidence=IEA] [GO:0061072 "iris morphogenesis"
evidence=IEA] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048505 "regulation of timing
of cell differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0021918 "regulation of
transcription from RNA polymerase II promoter involved in somatic
motor neuron fate commitment" evidence=IEA] [GO:0021913 "regulation
of transcription from RNA polymerase II promoter involved in
ventral spinal cord interneuron specification" evidence=IEA]
[GO:0021912 "regulation of transcription from RNA polymerase II
promoter involved in spinal cord motor neuron fate specification"
evidence=IEA] [GO:0021905 "forebrain-midbrain boundary formation"
evidence=IEA] [GO:0021902 "commitment of neuronal cell to specific
neuron type in forebrain" evidence=IEA] [GO:0021798 "forebrain
dorsal/ventral pattern formation" evidence=IEA] [GO:0021797
"forebrain anterior/posterior pattern specification" evidence=IEA]
[GO:0021796 "cerebral cortex regionalization" evidence=IEA]
[GO:0021778 "oligodendrocyte cell fate specification" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0009611
"response to wounding" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0007435 "salivary gland
morphogenesis" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001709 "cell fate
determination" evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0009611
GO:GO:0007435 GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0000981 GO:GO:0033365
GO:GO:0001568 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0061303 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
GO:GO:0002052 GO:GO:0009950 GO:GO:0021797 GO:GO:0048596
GO:GO:0023019 GO:GO:0002088 GO:GO:0042462 GO:GO:0021796
GO:GO:0021913 GO:GO:0032808 GO:GO:0021798 GO:GO:0048505
GO:GO:0021905 GeneTree:ENSGT00680000099553 GO:GO:0048708
GO:GO:0061072 GO:GO:0021912 CTD:5080 KO:K08031 OMA:NGQTGTW
GO:GO:0021902 GO:GO:0021778 GO:GO:0003322 GO:GO:0021918
EMBL:CU463938 RefSeq:NP_001231101.1 RefSeq:NP_001231102.1
UniGene:Ssc.33027 ProteinModelPortal:F2Z5M7 SMR:F2Z5M7
Ensembl:ENSSSCT00000014546 GeneID:100514152 KEGG:ssc:100514152
Uniprot:F2Z5M7
Length = 422
Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 220 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 279
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 280 NTPSHIPISSS------FSTSV--YQPIPQPTT 304
>MGI|MGI:97490 [details] [associations]
symbol:Pax6 "paired box gene 6" species:10090 "Mus musculus"
[GO:0000790 "nuclear chromatin" evidence=ISO;IDA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISO;IDA]
[GO:0001568 "blood vessel development" evidence=ISO] [GO:0001709
"cell fate determination" evidence=IMP] [GO:0001764 "neuron
migration" evidence=ISO;IMP] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IMP] [GO:0002088 "lens
development in camera-type eye" evidence=IMP] [GO:0003322
"pancreatic A cell development" evidence=ISO;IMP] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003680 "AT DNA binding" evidence=ISO]
[GO:0003690 "double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0007224 "smoothened
signaling pathway" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007420
"brain development" evidence=ISO;IMP] [GO:0007435 "salivary gland
morphogenesis" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IGI;IMP] [GO:0009953
"dorsal/ventral pattern formation" evidence=IMP] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0010628 "positive
regulation of gene expression" evidence=ISO;IMP] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0021543 "pallium
development" evidence=IMP] [GO:0021778 "oligodendrocyte cell fate
specification" evidence=IMP] [GO:0021796 "cerebral cortex
regionalization" evidence=IMP] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IMP] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IMP]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IMP] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IMP] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IMP] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IMP] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IMP]
[GO:0021983 "pituitary gland development" evidence=IMP] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IDA] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0030216 "keratinocyte differentiation" evidence=IMP]
[GO:0030334 "regulation of cell migration" evidence=IMP]
[GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IMP] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0032808 "lacrimal gland development" evidence=IMP] [GO:0033365
"protein localization to organelle" evidence=IMP] [GO:0035035
"histone acetyltransferase binding" evidence=IDA] [GO:0042462 "eye
photoreceptor cell development" evidence=IMP] [GO:0042593 "glucose
homeostasis" evidence=ISO] [GO:0042660 "positive regulation of cell
fate specification" evidence=ISO] [GO:0043010 "camera-type eye
development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0044424 "intracellular part"
evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IGI;IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0048505 "regulation of timing of cell differentiation"
evidence=IMP] [GO:0048596 "embryonic camera-type eye morphogenesis"
evidence=IGI] [GO:0048708 "astrocyte differentiation" evidence=IMP]
[GO:0050678 "regulation of epithelial cell proliferation"
evidence=ISO] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0050767 "regulation of
neurogenesis" evidence=ISO;IMP] [GO:0061072 "iris morphogenesis"
evidence=ISO] [GO:0061303 "cornea development in camera-type eye"
evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=IDA]
[GO:0070412 "R-SMAD binding" evidence=ISO;IDA] [GO:0071837 "HMG box
domain binding" evidence=IPI] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 MGI:MGI:97490
GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0030216
GO:GO:0009611 GO:GO:0007435 GO:GO:0045944 GO:GO:0045665
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030334
GO:GO:0000790 GO:GO:0000981 GO:GO:0033365 GO:GO:0001568
GO:GO:0021983 GO:GO:0050680 GO:GO:0000979 GO:GO:0061303
GO:GO:0035035 GO:GO:0030858 GO:GO:0007224 GO:GO:0070412
GO:GO:0001709 GO:GO:0002052 GO:GO:0009950 GO:GO:0021797
GO:GO:0048596 GO:GO:0023019 GO:GO:0002088 GO:GO:0042462
UniGene:Mm.33870 GO:GO:0021796 GO:GO:0021913 GO:GO:0032808
GO:GO:0021798 GO:GO:0048505 GO:GO:0021905 GO:GO:0070410
eggNOG:NOG326044 GeneTree:ENSGT00680000099553 GO:GO:0048708
GO:GO:0061072 GO:GO:0021912 HOVERGEN:HBG009115 CTD:5080 KO:K08031
OMA:NGQTGTW GO:GO:0021902 GO:GO:0021778 GO:GO:0003322 GO:GO:0021918
EMBL:X63963 EMBL:Y19196 EMBL:Y19199 EMBL:AK028059 EMBL:BC011272
EMBL:BC036957 EMBL:M77842 IPI:IPI00118638 IPI:IPI00459261
PIR:S42234 RefSeq:NP_001231127.1 RefSeq:NP_001231129.1
RefSeq:NP_001231130.1 RefSeq:NP_001231131.1 RefSeq:NP_038655.1
UniGene:Mm.3608 UniGene:Mm.487124 ProteinModelPortal:P63015
SMR:P63015 IntAct:P63015 MINT:MINT-1782085 STRING:P63015
PhosphoSite:P63015 PRIDE:P63015 Ensembl:ENSMUST00000090391
Ensembl:ENSMUST00000090397 Ensembl:ENSMUST00000111082
Ensembl:ENSMUST00000111083 Ensembl:ENSMUST00000111084
Ensembl:ENSMUST00000111085 Ensembl:ENSMUST00000111086
Ensembl:ENSMUST00000111087 Ensembl:ENSMUST00000167211 GeneID:18508
KEGG:mmu:18508 NextBio:294236 Bgee:P63015 CleanEx:MM_PAX6
Genevestigator:P63015 GermOnline:ENSMUSG00000027168 Uniprot:P63015
Length = 422
Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 220 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 279
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 280 NTPSHIPISSS------FSTSV--YQPIPQPTT 304
>RGD|3258 [details] [associations]
symbol:Pax6 "paired box 6" species:10116 "Rattus norvegicus"
[GO:0000790 "nuclear chromatin" evidence=ISO;IDA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=ISO;IC] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISO;IC]
[GO:0001568 "blood vessel development" evidence=IEA;ISO] [GO:0001709
"cell fate determination" evidence=IEA;ISO] [GO:0001764 "neuron
migration" evidence=ISO;IMP] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA;ISO] [GO:0002088 "lens
development in camera-type eye" evidence=IEA;ISO] [GO:0003322
"pancreatic A cell development" evidence=ISO;IMP] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003680 "AT DNA binding" evidence=IDA]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO;IMP]
[GO:0007224 "smoothened signaling pathway" evidence=IEA;ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0007417 "central nervous system development"
evidence=IEP] [GO:0007420 "brain development" evidence=ISO;IMP]
[GO:0007435 "salivary gland morphogenesis" evidence=IEA;ISO]
[GO:0008134 "transcription factor binding" evidence=IEA;ISO]
[GO:0008285 "negative regulation of cell proliferation" evidence=ISO]
[GO:0009611 "response to wounding" evidence=IEA;ISO] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA;ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISO] [GO:0010468
"regulation of gene expression" evidence=ISO] [GO:0010628 "positive
regulation of gene expression" evidence=ISO;IMP] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0021543 "pallium development" evidence=ISO]
[GO:0021778 "oligodendrocyte cell fate specification"
evidence=IEA;ISO] [GO:0021796 "cerebral cortex regionalization"
evidence=IEA;ISO] [GO:0021797 "forebrain anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0021798 "forebrain
dorsal/ventral pattern formation" evidence=IEA;ISO] [GO:0021902
"commitment of neuronal cell to specific neuron type in forebrain"
evidence=IEA;ISO] [GO:0021905 "forebrain-midbrain boundary formation"
evidence=IEA;ISO] [GO:0021912 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord motor neuron fate
specification" evidence=IEA;ISO] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA;ISO] [GO:0021918
"regulation of transcription from RNA polymerase II promoter involved
in somatic motor neuron fate commitment" evidence=IEA;ISO]
[GO:0021983 "pituitary gland development" evidence=IEA;ISO]
[GO:0023019 "signal transduction involved in regulation of gene
expression" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
evidence=ISO] [GO:0030216 "keratinocyte differentiation"
evidence=IEA;ISO] [GO:0030334 "regulation of cell migration"
evidence=IEA;ISO] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA;ISO] [GO:0030900 "forebrain
development" evidence=ISO] [GO:0030902 "hindbrain development"
evidence=IDA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0032808 "lacrimal gland development"
evidence=IEA;ISO] [GO:0033365 "protein localization to organelle"
evidence=IEA;ISO] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA;ISO] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA;ISO] [GO:0042593 "glucose homeostasis" evidence=IEA;ISO]
[GO:0042660 "positive regulation of cell fate specification"
evidence=IMP] [GO:0043010 "camera-type eye development" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=RCA;IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0044424 "intracellular part" evidence=ISO]
[GO:0045165 "cell fate commitment" evidence=ISO] [GO:0045664
"regulation of neuron differentiation" evidence=IDA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IC] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048505
"regulation of timing of cell differentiation" evidence=IEA;ISO]
[GO:0048596 "embryonic camera-type eye morphogenesis"
evidence=IEA;ISO] [GO:0048708 "astrocyte differentiation"
evidence=IEA;ISO] [GO:0050678 "regulation of epithelial cell
proliferation" evidence=IMP] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA;ISO] [GO:0050767
"regulation of neurogenesis" evidence=ISO;IMP] [GO:0050768 "negative
regulation of neurogenesis" evidence=ISS] [GO:0061072 "iris
morphogenesis" evidence=IEA;ISO] [GO:0061303 "cornea development in
camera-type eye" evidence=IEA;ISO] [GO:0070410 "co-SMAD binding"
evidence=IEA;ISO] [GO:0070412 "R-SMAD binding" evidence=IEA;ISO]
[GO:0071837 "HMG box domain binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 RGD:3258 GO:GO:0001764
GO:GO:0045893 GO:GO:0045664 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0000981
GO:GO:0003690 GO:GO:0030902 GO:GO:0004842 GO:GO:0000979 GO:GO:0050768
GO:GO:0003680 GO:GO:0050678 GO:GO:0042660 eggNOG:NOG326044
GeneTree:ENSGT00680000099553 HOVERGEN:HBG009115 CTD:5080 KO:K08031
GO:GO:0003322 EMBL:U69644 EMBL:AY540905 EMBL:AY540906 EMBL:AJ627631
EMBL:BC128741 EMBL:S74393 IPI:IPI00231698 IPI:IPI00464480 PIR:S36166
RefSeq:NP_037133.1 UniGene:Rn.89724 ProteinModelPortal:P63016
SMR:P63016 STRING:P63016 Ensembl:ENSRNOT00000005882
Ensembl:ENSRNOT00000006302 GeneID:25509 KEGG:rno:25509 UCSC:RGD:3258
NextBio:606937 ArrayExpress:P63016 Genevestigator:P63016
GermOnline:ENSRNOG00000004410 Uniprot:P63016
Length = 422
Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 220 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 279
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 280 NTPSHIPISSS------FSTSV--YQPIPQPTT 304
>UNIPROTKB|E2QVR4 [details] [associations]
symbol:ARX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 Ensembl:ENSCAFT00000021479 Uniprot:E2QVR4
Length = 564
Score = 149 (57.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE AF K+HYPD++ REELA+ QVWFQNRRAK+RK+EK
Sbjct: 341 QLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 390
>UNIPROTKB|E2QX72 [details] [associations]
symbol:PAX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
OMA:VHQSTLP EMBL:AAEX03018179 EMBL:AAEX03018180 EMBL:AAEX03018181
Ensembl:ENSCAFT00000025445 Uniprot:E2QX72
Length = 485
Score = 148 (57.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/95 (42%), Positives = 48/95 (50%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQE--KQLQ--KA 49
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ QL
Sbjct: 230 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNH 289
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNTIN 84
L P P + Y + YQP P ++
Sbjct: 290 LIPGGFPPTAMPTLPT-YQLSETSYQPTAIPQAVS 323
>UNIPROTKB|F1LMV3 [details] [associations]
symbol:Pax3 "Protein Pax3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0001755 "neural crest
cell migration" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048066 "developmental pigmentation"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0060594 "mammary gland specification" evidence=IEA] [GO:0071837
"HMG box domain binding" evidence=IPI] InterPro:IPR001356
InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
SMART:SM00389 RGD:620431 GO:GO:0005634 GO:GO:0007507 GO:GO:0008284
GO:GO:0008283 GO:GO:0001755 GO:GO:0043565 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0003705 GO:GO:0000122 GO:GO:0007517 GO:GO:0001843
GO:GO:0021527 GO:GO:0048663 GO:GO:0048066 GO:GO:0060594
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
OMA:VHQSTLP IPI:IPI00765155 Ensembl:ENSRNOT00000018652
ArrayExpress:F1LMV3 Uniprot:F1LMV3
Length = 487
Score = 148 (57.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/95 (42%), Positives = 48/95 (50%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQE--KQLQ--KA 49
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ QL
Sbjct: 232 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNH 291
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNTIN 84
L P P + Y + YQP P ++
Sbjct: 292 LIPGGFPPTAMPTLPT-YQLSETSYQPTSIPQAVS 325
>UNIPROTKB|F6XTT5 [details] [associations]
symbol:ARX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:VTHPEER Ensembl:ENSCAFT00000021479 EMBL:AAEX03026212
EMBL:AAEX03026213 Uniprot:F6XTT5
Length = 574
Score = 149 (57.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE AF K+HYPD++ REELA+ QVWFQNRRAK+RK+EK
Sbjct: 351 QLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREK 400
>ZFIN|ZDB-GENE-020905-5 [details] [associations]
symbol:prrx1a "paired related homeobox 1a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-020905-5 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P06601
HOVERGEN:HBG021349 OrthoDB:EOG4RR6J8 eggNOG:NOG309174 EMBL:BX548024
EMBL:BC053228 IPI:IPI00493267 RefSeq:NP_999899.1 UniGene:Dr.32622
SMR:Q7T373 Ensembl:ENSDART00000041365 GeneID:406431 KEGG:dre:406431
CTD:406431 InParanoid:Q7T373 OMA:CANNTTA NextBio:20818028
Uniprot:Q7T373
Length = 245
Score = 141 (54.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 33/87 (37%), Positives = 47/87 (54%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL LE F ++HYPD + RE+LA QVWFQNRRAK+R+ E+ + + S+
Sbjct: 107 QLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASL 166
Query: 55 IPTCNGAMMRNIYPTTSRGYQPYPHPN 81
+ + +G + P R P P PN
Sbjct: 167 LKSFSGEVTAVEQPIVPR---PAPRPN 190
>UNIPROTKB|F1NYH7 [details] [associations]
symbol:F1NYH7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 EMBL:AADN02024154 EMBL:AADN02024155
EMBL:AADN02024156 EMBL:AADN02024157 EMBL:AADN02024158
IPI:IPI00587855 Ensembl:ENSGALT00000006292 ArrayExpress:F1NYH7
Uniprot:F1NYH7
Length = 188
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 30/49 (61%), Positives = 34/49 (69%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQ 42
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ
Sbjct: 138 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 186
>UNIPROTKB|F1NXF3 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
gallus" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0001709
"cell fate determination" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007435 "salivary gland morphogenesis" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032808 "lacrimal gland
development" evidence=IEA] [GO:0033365 "protein localization to
organelle" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048505 "regulation of timing of cell differentiation"
evidence=IEA] [GO:0048596 "embryonic camera-type eye morphogenesis"
evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0061072 "iris morphogenesis" evidence=IEA]
[GO:0061303 "cornea development in camera-type eye" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0070412 "R-SMAD
binding" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005737
GO:GO:0009611 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030334
GO:GO:0000790 GO:GO:0000981 GO:GO:0033365 GO:GO:0050680
GO:GO:0000979 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
GO:GO:0023019 GO:GO:0048505 GeneTree:ENSGT00680000099553
OMA:NGQTGTW EMBL:AADN02040161 EMBL:AC140946 IPI:IPI00819256
Ensembl:ENSGALT00000040120 ArrayExpress:F1NXF3 Uniprot:F1NXF3
Length = 436
Score = 147 (56.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 38/93 (40%), Positives = 51/93 (54%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 234 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 293
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNT 82
TPS IP + + T+ YQP P P T
Sbjct: 294 NTPSHIPISSS------FSTSV--YQPIPQPTT 318
>UNIPROTKB|A6NNA5 [details] [associations]
symbol:DRGX "Dorsal root ganglia homeobox protein"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 EMBL:CH471187 EMBL:AC027674 IPI:IPI00060044
UniGene:Hs.534530 ProteinModelPortal:A6NNA5 SMR:A6NNA5
STRING:A6NNA5 PhosphoSite:A6NNA5 PRIDE:A6NNA5
Ensembl:ENST00000374139 UCSC:uc021pqd.1 GeneCards:GC10M050573
HGNC:HGNC:21536 HPA:HPA043978 MIM:606701 neXtProt:NX_A6NNA5
eggNOG:NOG39948 HOVERGEN:HBG106743 InParanoid:A6NNA5
OrthoDB:EOG49CQ88 PhylomeDB:A6NNA5 ArrayExpress:A6NNA5 Bgee:A6NNA5
CleanEx:HS_DRGX Genevestigator:A6NNA5 Uniprot:A6NNA5
Length = 263
Score = 142 (55.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
+QL LEA FA++HYPD++ REELA+ QVWFQNRRAK+RK E+
Sbjct: 43 QQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 93
>ZFIN|ZDB-GENE-990415-205 [details] [associations]
symbol:vsx1 "visual system homeobox 1 homolog,
chx10-like" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-205 GO:GO:0007275 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG237888
HOGENOM:HOG000115909 InterPro:IPR023339 PROSITE:PS51496 CTD:30813
HOVERGEN:HBG036251 KO:K09335 OrthoDB:EOG4907B0 EMBL:AF025348
IPI:IPI00513332 RefSeq:NP_571408.1 UniGene:Dr.558
ProteinModelPortal:O42250 SMR:O42250 STRING:O42250 GeneID:30598
KEGG:dre:30598 InParanoid:O42250 NextBio:20806965
ArrayExpress:O42250 Uniprot:O42250
Length = 344
Score = 145 (56.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF ++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK ++ SV
Sbjct: 162 QLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRS---SV 218
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 219 MAEYGLYGAMVRHSIP 234
>UNIPROTKB|C9JW76 [details] [associations]
symbol:DRGX "Dorsal root ganglia homeobox protein"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0009593 "detection of chemical stimulus" evidence=IEA]
[GO:0016048 "detection of temperature stimulus" evidence=IEA]
[GO:0021516 "dorsal spinal cord development" evidence=IEA]
[GO:0021559 "trigeminal nerve development" evidence=IEA]
[GO:0050954 "sensory perception of mechanical stimulus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0021559 GO:GO:0021516 EMBL:AC027674
UniGene:Hs.534530 HGNC:HGNC:21536 GO:GO:0009593 GO:GO:0016048
GO:GO:0050954 IPI:IPI00943047 RefSeq:NP_001073989.1
ProteinModelPortal:C9JW76 SMR:C9JW76 STRING:C9JW76
Ensembl:ENST00000434016 GeneID:644168 KEGG:hsa:644168
UCSC:uc010qgq.2 CTD:644168 PharmGKB:PA162384078 OMA:KGSPLCS
GenomeRNAi:644168 NextBio:115949 ArrayExpress:C9JW76 Bgee:C9JW76
Uniprot:C9JW76
Length = 268
Score = 142 (55.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
+QL LEA FA++HYPD++ REELA+ QVWFQNRRAK+RK E+
Sbjct: 48 QQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 98
>FB|FBgn0015524 [details] [associations]
symbol:otp "orthopedia" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0007417 "central nervous system development"
evidence=NAS] [GO:0007379 "segment specification" evidence=NAS]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:AE013599
GO:GO:0007275 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046331 InterPro:IPR003654
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0000976
eggNOG:NOG256838 EMBL:BT023887 EMBL:BT030422 RefSeq:NP_001036563.1
RefSeq:NP_001097388.2 UniGene:Dm.14052 ProteinModelPortal:P56672
SMR:P56672 DIP:DIP-17198N MINT:MINT-743840 STRING:P56672
EnsemblMetazoa:FBtr0290289 GeneID:37364 KEGG:dme:Dmel_CG10036
UCSC:CG10036-RC CTD:23440 FlyBase:FBgn0015524 InParanoid:P56672
OMA:HAGVNSF OrthoDB:EOG4J6Q7G PhylomeDB:P56672 GenomeRNAi:37364
NextBio:803284 Bgee:P56672 GermOnline:CG10036 Uniprot:P56672
Length = 409
Score = 146 (56.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE F+K+HYPDI+ REE+A+ QVWFQNRRAK++K++K TP
Sbjct: 120 QLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRTPGA 179
Query: 55 IPTCNG 60
+ +G
Sbjct: 180 LLPSHG 185
>ZFIN|ZDB-GENE-040426-1457 [details] [associations]
symbol:shox2 "short stature homeobox 2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040426-1457 GO:GO:0005634 GO:GO:0007507 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 HSSP:P06601 CTD:6474 eggNOG:NOG113578
HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2 EMBL:BX004974
EMBL:BC056324 EMBL:BC065345 IPI:IPI00491363 RefSeq:NP_957490.1
UniGene:Dr.26980 SMR:Q7SZN8 Ensembl:ENSDART00000009564
GeneID:394171 KEGG:dre:394171 InParanoid:Q7SZN8 NextBio:20815116
Uniprot:Q7SZN8
Length = 299
Score = 143 (55.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE QL K +
Sbjct: 118 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGV 174
>UNIPROTKB|E1C2N6 [details] [associations]
symbol:E1C2N6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
OMA:VHQSTLP EMBL:AADN02024154 EMBL:AADN02024155 EMBL:AADN02024156
EMBL:AADN02024157 EMBL:AADN02024158 IPI:IPI00819860
Ensembl:ENSGALT00000008428 ArrayExpress:E1C2N6 Uniprot:E1C2N6
Length = 484
Score = 147 (56.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 40/95 (42%), Positives = 48/95 (50%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQE--KQLQ--KA 49
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ QL
Sbjct: 229 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNH 288
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNTIN 84
L P P + Y + YQP P ++
Sbjct: 289 LIPGGFPPSAMPTLPT-YQLSEPSYQPTSIPQAVS 322
>UNIPROTKB|F1NUP3 [details] [associations]
symbol:F1NUP3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048066 "developmental pigmentation"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0060594 "mammary gland specification" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
EMBL:AADN02024154 EMBL:AADN02024155 EMBL:AADN02024156
EMBL:AADN02024157 EMBL:AADN02024158 IPI:IPI00591508
Ensembl:ENSGALT00000040854 ArrayExpress:F1NUP3 Uniprot:F1NUP3
Length = 491
Score = 147 (56.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 40/95 (42%), Positives = 48/95 (50%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQE--KQLQ--KA 49
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ QL
Sbjct: 236 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNH 295
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQPYPHPNTIN 84
L P P + Y + YQP P ++
Sbjct: 296 LIPGGFPPSAMPTLPT-YQLSEPSYQPTSIPQAVS 329
>ZFIN|ZDB-GENE-030131-9033 [details] [associations]
symbol:prrx1b "paired related homeobox 1b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030131-9033 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0010628 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P10037
eggNOG:NOG267226 HOVERGEN:HBG021349 KO:K09329 OMA:WGSAAPY
EMBL:CU571309 EMBL:BC064671 IPI:IPI00499847 RefSeq:NP_956344.1
UniGene:Dr.76340 SMR:Q6P295 Ensembl:ENSDART00000061588
GeneID:337089 KEGG:dre:337089 CTD:337089 InParanoid:Q6P295
NextBio:20812053 Uniprot:Q6P295
Length = 245
Score = 140 (54.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 33/87 (37%), Positives = 47/87 (54%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL LE F ++HYPD + RE+LA QVWFQNRRAK+R+ E+ + + S+
Sbjct: 107 QLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASL 166
Query: 55 IPTCNGAMMRNIYPTTSRGYQPYPHPN 81
+ + +G + P R P P PN
Sbjct: 167 LKSYSGDVTAVEQPIVPR---PAPRPN 190
>WB|WBGene00000435 [details] [associations]
symbol:ceh-10 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0030334 "regulation of cell migration" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0001708 GO:GO:0018991 GO:GO:0001764
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 EMBL:U19995 EMBL:FO081687 EMBL:X52812 PIR:S13130
PIR:T34470 PIR:T37297 RefSeq:NP_498251.1 UniGene:Cel.10678
ProteinModelPortal:P41935 SMR:P41935 STRING:P41935
EnsemblMetazoa:W03A3.1 GeneID:175811 KEGG:cel:CELE_W03A3.1
UCSC:W03A3.1 CTD:175811 WormBase:W03A3.1 eggNOG:NOG237888
GeneTree:ENSGT00700000104256 HOGENOM:HOG000115909 InParanoid:P41935
KO:K09336 OMA:YQIDELE NextBio:889770 InterPro:IPR023339
PROSITE:PS51496 Uniprot:P41935
Length = 344
Score = 144 (55.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/74 (51%), Positives = 43/74 (58%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
Q+ ELE AF SHYPDIY RE LA QVWFQNRRAK+RK EK K+ T
Sbjct: 147 QIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQVWFQNRRAKWRKTEKTWGKS-TIMA 205
Query: 55 IPTCNGAMMRNIYP 68
GAM+R+ P
Sbjct: 206 EYGLYGAMVRHSLP 219
>ZFIN|ZDB-GENE-980526-52 [details] [associations]
symbol:pax3a "paired box gene 3a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0048066 "developmental pigmentation"
evidence=IMP] [GO:0050936 "xanthophore differentiation"
evidence=IMP] [GO:0048484 "enteric nervous system development"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 ZFIN:ZDB-GENE-980526-52
GO:GO:0005634 GO:GO:0001755 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048484 GO:GO:0050936
HSSP:P06601 eggNOG:NOG326044 GeneTree:ENSGT00680000099553 KO:K09381
HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360
HOGENOM:HOG000230939 EMBL:BX085193 EMBL:AF014366 IPI:IPI00508576
RefSeq:NP_571352.1 UniGene:Dr.75806 SMR:O57416 STRING:O57416
Ensembl:ENSDART00000038828 GeneID:30532 KEGG:dre:30532 CTD:30532
InParanoid:O57416 OMA:EENEPRT NextBio:20806915 Uniprot:O57416
Length = 509
Score = 147 (56.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 40/93 (43%), Positives = 52/93 (55%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ Q
Sbjct: 230 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNH 289
Query: 54 VIPT-CNGAMMRNIYPTTSRGYQPYPHPNTINR 85
+IP + M ++ P PYP P++I++
Sbjct: 290 LIPGGFPPSAMSSLQPYQLAD-SPYP-PSSISQ 320
>UNIPROTKB|F6Y4K5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 CTD:6474 KO:K09331
OMA:CTEAGRD EMBL:AAEX03013721 Ensembl:ENSCAFT00000014128
RefSeq:XP_003639881.1 GeneID:485732 KEGG:cfa:485732 Uniprot:F6Y4K5
Length = 319
Score = 143 (55.4 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE QL K +
Sbjct: 150 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGV 206
>UNIPROTKB|I3L828 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
KO:K09331 OMA:CTEAGRD GO:GO:0003170 EMBL:FP312663
RefSeq:NP_001230281.1 UniGene:Ssc.38718 Ensembl:ENSSSCT00000025053
GeneID:100628206 KEGG:ssc:100628206 Uniprot:I3L828
Length = 321
Score = 143 (55.4 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE QL K +
Sbjct: 152 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGV 208
>UNIPROTKB|E1BLB9 [details] [associations]
symbol:E1BLB9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 OMA:CTEAGRD
GO:GO:0003170 EMBL:DAAA02002472 IPI:IPI00838807 UniGene:Bt.59425
Ensembl:ENSBTAT00000044731 NextBio:20874258 Uniprot:E1BLB9
Length = 331
Score = 143 (55.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE QL K +
Sbjct: 150 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGV 206
>UNIPROTKB|O60902 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0002063 "chondrocyte development" evidence=IEA] [GO:0003170
"heart valve development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0007507 "heart
development" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0007399 GO:GO:0007507 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
EMBL:AJ002367 EMBL:AJ002368 EMBL:BC008829 EMBL:AF022654
EMBL:AF023203 IPI:IPI00218369 IPI:IPI00295006 IPI:IPI00793628
RefSeq:NP_001157150.1 RefSeq:NP_003021.3 RefSeq:NP_006875.2
UniGene:Hs.55967 ProteinModelPortal:O60902 SMR:O60902 IntAct:O60902
STRING:O60902 PhosphoSite:O60902 PaxDb:O60902 PRIDE:O60902
DNASU:6474 Ensembl:ENST00000389589 Ensembl:ENST00000425436
GeneID:6474 KEGG:hsa:6474 UCSC:uc003fbr.3 UCSC:uc003fbs.3
UCSC:uc010hvw.3 CTD:6474 GeneCards:GC03M157813 HGNC:HGNC:10854
MIM:602504 neXtProt:NX_O60902 PharmGKB:PA35756 eggNOG:NOG113578
HOVERGEN:HBG007233 InParanoid:O60902 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 GenomeRNAi:6474 NextBio:25151 ArrayExpress:O60902
Bgee:O60902 CleanEx:HS_SHOX2 Genevestigator:O60902
GermOnline:ENSG00000168779 Uniprot:O60902
Length = 331
Score = 143 (55.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE QL K +
Sbjct: 150 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGV 206
>MGI|MGI:1201673 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IMP] [GO:0002062 "chondrocyte
differentiation" evidence=IMP] [GO:0002063 "chondrocyte
development" evidence=IMP] [GO:0003170 "heart valve development"
evidence=IMP] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IMP]
[GO:0032330 "regulation of chondrocyte differentiation"
evidence=IMP] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0048598 "embryonic morphogenesis" evidence=IMP] [GO:0048743
"positive regulation of skeletal muscle fiber development"
evidence=IMP] [GO:0050772 "positive regulation of axonogenesis"
evidence=IMP] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IMP] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IMP] [GO:0060415 "muscle
tissue morphogenesis" evidence=IMP] [GO:2000172 "regulation of
branching morphogenesis of a nerve" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:U66918 MGI:MGI:1201673
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 EMBL:U67055 EMBL:U65071 EMBL:U65072
IPI:IPI00230342 IPI:IPI00625691 RefSeq:NP_038693.1 UniGene:Mm.39093
ProteinModelPortal:P70390 SMR:P70390 STRING:P70390
PhosphoSite:P70390 PRIDE:P70390 Ensembl:ENSMUST00000029422
Ensembl:ENSMUST00000162060 Ensembl:ENSMUST00000162439 GeneID:20429
KEGG:mmu:20429 UCSC:uc008pld.1 UCSC:uc008ple.1 InParanoid:P70390
NextBio:298446 Bgee:P70390 CleanEx:MM_SHOX2 Genevestigator:P70390
GermOnline:ENSMUSG00000027833 GO:GO:0003170 Uniprot:P70390
Length = 331
Score = 143 (55.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE QL K +
Sbjct: 150 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGV 206
>UNIPROTKB|E2QZN5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 Ensembl:ENSCAFT00000014128 Uniprot:E2QZN5
Length = 334
Score = 143 (55.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE QL K +
Sbjct: 153 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGV 209
>ZFIN|ZDB-GENE-080917-54 [details] [associations]
symbol:pax7b "paired box gene 7b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 ZFIN:ZDB-GENE-080917-54 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 KO:K09381 InterPro:IPR022106
Pfam:PF12360 HOGENOM:HOG000230939 OrthoDB:EOG4JM7PH
EMBL:CABZ01012260 EMBL:CABZ01012261 EMBL:CABZ01012262
EMBL:CABZ01012263 EMBL:CABZ01012264 EMBL:FJ792831 IPI:IPI00862888
RefSeq:NP_001139621.1 UniGene:Dr.134092 Ensembl:ENSDART00000129992
GeneID:566533 KEGG:dre:566533 CTD:566533 NextBio:20888238
Uniprot:C0M005
Length = 510
Score = 146 (56.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 49/132 (37%), Positives = 60/132 (45%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKA---- 49
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ Q A
Sbjct: 233 EQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNH 292
Query: 50 LTPSVIPTCNGAMMRNIYPTTSRGYQ----PYPHPNTINRQHFVILVPGMSTEDEWYNKS 105
L P P G Y Y P T++R L P + + S
Sbjct: 293 LLPGGFPP-TGMPTLPTYQLPESSYPTTTLPQDVSGTVHRPQ--PLPPSTMHQGGLSSDS 349
Query: 106 LSALRMNSSHHS 117
SA ++S+ HS
Sbjct: 350 SSAYGLSSNRHS 361
>UNIPROTKB|O75360 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0021979 "hypothalamus cell
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048850 "hypophysis morphogenesis" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0060126 "somatotropin secreting cell differentiation"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0043066
GO:GO:0016477 GO:GO:0045944 GO:GO:0007417 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0001568 GO:GO:0009953 GO:GO:0000976
GO:GO:0060070 Orphanet:95494 MIM:262600 Orphanet:226307
GO:GO:0021979 GO:GO:0060126 CTD:5626 eggNOG:NOG293463
HOGENOM:HOG000115706 HOVERGEN:HBG053691 KO:K09327 OrthoDB:EOG4BZN3X
GO:GO:0048850 OMA:TCFPHPY EMBL:AF076214 EMBL:AF076215 EMBL:AF041141
EMBL:AF041139 EMBL:AF041140 EMBL:AC136940 EMBL:BC069076
IPI:IPI00025308 RefSeq:NP_006252.3 UniGene:Hs.158301
ProteinModelPortal:O75360 SMR:O75360 STRING:O75360
PhosphoSite:O75360 PRIDE:O75360 Ensembl:ENST00000308304 GeneID:5626
KEGG:hsa:5626 UCSC:uc003mif.1 GeneCards:GC05M177419 HGNC:HGNC:9455
MIM:601538 neXtProt:NX_O75360 Orphanet:90695 PharmGKB:PA33808
InParanoid:O75360 PhylomeDB:O75360 GenomeRNAi:5626 NextBio:21868
Bgee:O75360 CleanEx:HS_PROP1 Genevestigator:O75360
GermOnline:ENSG00000175325 Uniprot:O75360
Length = 226
Score = 137 (53.3 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 41/116 (35%), Positives = 56/116 (48%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL---T 51
QL +LE+AF ++ YPDI+ RE LA QVWFQNRRAK RKQE+ L + L +
Sbjct: 80 QLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQERSLLQPLAHLS 139
Query: 52 P----SVIPTCNGAMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDE-WY 102
P S +P P P+P+ + + Q +S + E WY
Sbjct: 140 PAAFSSFLPESTACPYSYAAPPPPVTCFPHPYSHALPSQPSTGGAFALSHQSEDWY 195
>RGD|620511 [details] [associations]
symbol:Crx "cone-rod homeobox" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0007623 "circadian rhythm" evidence=IEP]
[GO:0043522 "leucine zipper domain binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046534 "positive
regulation of photoreceptor cell differentiation" evidence=IEP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:620511 GO:GO:0005634
GO:GO:0003677 GO:GO:0007623 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0060041 EMBL:CH473979 HOVERGEN:HBG004028
OMA:QTKARPA HSSP:P06601 GO:GO:0046534 IPI:IPI00325864 EMBL:AB021129
UniGene:Rn.44287 SMR:Q9WTQ9 STRING:Q9WTQ9 UCSC:RGD:620511
InParanoid:Q9WTQ9 Genevestigator:Q9WTQ9 Uniprot:Q9WTQ9
Length = 299
Score = 141 (54.7 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 32/61 (52%), Positives = 41/61 (67%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQ-EKQLQKALTPS 53
QL ELEA FAK+ YPD+Y REE+A+ QVWF+NRRAK R+Q ++Q Q+ P
Sbjct: 50 QLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQKQQQQPPG 109
Query: 54 V 54
V
Sbjct: 110 V 110
>UNIPROTKB|G3V5W7 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
ProteinModelPortal:G3V5W7 SMR:G3V5W7 Ensembl:ENST00000531910
ArrayExpress:G3V5W7 Bgee:G3V5W7 Uniprot:G3V5W7
Length = 162
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK----QLQKA 49
EQ+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK + Q +
Sbjct: 84 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAS 143
Query: 50 LTPSVIPTCNGAMMRNIY 67
TPS IP + + ++Y
Sbjct: 144 NTPSHIPI-SSSFSTSVY 160
>UNIPROTKB|G3X7M1 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 CTD:6473
OMA:SNHCPVH EMBL:DAAA02005893 RefSeq:NP_001178475.1
UniGene:Bt.106108 Ensembl:ENSBTAT00000038279 GeneID:615159
KEGG:bta:615159 NextBio:20899478 Uniprot:G3X7M1
Length = 306
Score = 141 (54.7 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 35/76 (46%), Positives = 44/76 (57%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKAL--- 50
EQL ELE F ++HYPD + REEL+ QVWFQNRRAK RKQE Q+ ++
Sbjct: 129 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHNSVILG 188
Query: 51 TPSVIPTCNGAMMRNI 66
T S + C A N+
Sbjct: 189 TASHLDACRVAPYVNM 204
>UNIPROTKB|Q0P031 [details] [associations]
symbol:vsx1 "Visual system homeobox 1" species:8355
"Xenopus laevis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0060040 "retinal bipolar
neuron differentiation" evidence=IEP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0060040 InterPro:IPR023339 PROSITE:PS51496 CTD:30813
HOVERGEN:HBG036251 KO:K09335 EMBL:DQ324366 RefSeq:NP_001090191.1
UniGene:Xl.12402 ProteinModelPortal:Q0P031 SMR:Q0P031 GeneID:779073
KEGG:xla:779073 Xenbase:XB-GENE-866467 Uniprot:Q0P031
Length = 344
Score = 142 (55.0 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE +F ++HYPD+Y RE LA+ QVWFQNRRAK+RK+EK ++ SV
Sbjct: 161 QLDELEKSFNEAHYPDVYAREMLALKTELPEDRIQVWFQNRRAKWRKREKCWGRS---SV 217
Query: 55 IPTCN--GAMMRNIYP 68
+ GAM+R+ P
Sbjct: 218 MAEYGLYGAMVRHSIP 233
>UNIPROTKB|F1LPR9 [details] [associations]
symbol:Crx "Protein Crx" species:10116 "Rattus norvegicus"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0043522 "leucine zipper domain binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR013851 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03529 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620511 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0060041 GeneTree:ENSGT00700000104128 IPI:IPI00325864
Ensembl:ENSRNOT00000018858 ArrayExpress:F1LPR9 Uniprot:F1LPR9
Length = 323
Score = 141 (54.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 32/61 (52%), Positives = 41/61 (67%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQ-EKQLQKALTPS 53
QL ELEA FAK+ YPD+Y REE+A+ QVWF+NRRAK R+Q ++Q Q+ P
Sbjct: 74 QLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQKQQQQPPG 133
Query: 54 V 54
V
Sbjct: 134 V 134
>WB|WBGene00006744 [details] [associations]
symbol:unc-4 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007416 "synapse assembly" evidence=IMP] [GO:0007400
"neuroblast fate determination" evidence=IMP] [GO:0050803
"regulation of synapse structure and activity" evidence=IMP]
[GO:0050770 "regulation of axonogenesis" evidence=IMP] [GO:0030424
"axon" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030424 GO:GO:0043565
GO:GO:0050803 GO:GO:0040011 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007400 GO:GO:0008039
GO:GO:0050770 GO:GO:0007416 EMBL:Z47072 EMBL:X64904 PIR:T21388
RefSeq:NP_496138.1 UniGene:Cel.14252 ProteinModelPortal:P29506
SMR:P29506 STRING:P29506 EnsemblMetazoa:F26C11.2 GeneID:174544
KEGG:cel:CELE_F26C11.2 UCSC:F26C11.2 CTD:32757 WormBase:F26C11.2
eggNOG:NOG283594 GeneTree:ENSGT00700000104564 HOGENOM:HOG000016205
InParanoid:P29506 KO:K09328 OMA:RVQACKN NextBio:884488
Uniprot:P29506
Length = 252
Score = 138 (53.6 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE+AF SHYPD++ RE LA+ QVWFQNRRAK+RK+E+
Sbjct: 99 QLEELESAFEASHYPDVFMREALAMRLDLLESRVQVWFQNRRAKWRKREQ 148
>UNIPROTKB|P29506 [details] [associations]
symbol:unc-4 "Homeobox protein unc-4" species:6239
"Caenorhabditis elegans" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0005634 "nucleus" evidence=NAS] [GO:0008039 "synaptic target
recognition" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030424 GO:GO:0043565
GO:GO:0050803 GO:GO:0040011 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007400 GO:GO:0008039
GO:GO:0050770 GO:GO:0007416 EMBL:Z47072 EMBL:X64904 PIR:T21388
RefSeq:NP_496138.1 UniGene:Cel.14252 ProteinModelPortal:P29506
SMR:P29506 STRING:P29506 EnsemblMetazoa:F26C11.2 GeneID:174544
KEGG:cel:CELE_F26C11.2 UCSC:F26C11.2 CTD:32757 WormBase:F26C11.2
eggNOG:NOG283594 GeneTree:ENSGT00700000104564 HOGENOM:HOG000016205
InParanoid:P29506 KO:K09328 OMA:RVQACKN NextBio:884488
Uniprot:P29506
Length = 252
Score = 138 (53.6 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL ELE+AF SHYPD++ RE LA+ QVWFQNRRAK+RK+E+
Sbjct: 99 QLEELESAFEASHYPDVFMREALAMRLDLLESRVQVWFQNRRAKWRKREQ 148
>FB|FBgn0010323 [details] [associations]
symbol:Gsc "Goosecoid" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IC;ISS;NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 EMBL:AE014134
GO:GO:0001078 GO:GO:0043565 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:145258 eggNOG:NOG247162 KO:K09324 EMBL:X95420 EMBL:U52968
PIR:S70617 RefSeq:NP_476949.1 UniGene:Dm.4841
ProteinModelPortal:P54366 SMR:P54366 IntAct:P54366 MINT:MINT-314608
STRING:P54366 PRIDE:P54366 GeneID:33240 KEGG:dme:Dmel_CG2851
FlyBase:FBgn0010323 HOGENOM:HOG000276707 InParanoid:P54366
OrthoDB:EOG4RV17N GenomeRNAi:33240 NextBio:782613 Bgee:P54366
GermOnline:CG2851 Uniprot:P54366
Length = 419
Score = 143 (55.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 35/84 (41%), Positives = 49/84 (58%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTPS 53
EQL +LEA F K+HYPD+ RE+LA+ +VWF+NRRAK+RKQ+++ Q+ L
Sbjct: 296 EQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKREEQERLRKL 355
Query: 54 VIPTC----NGAMMRNIYPTTSRG 73
C NG + T+S G
Sbjct: 356 QEEQCGSTTNGTTNSSSGTTSSTG 379
>UNIPROTKB|Q9XSK0 [details] [associations]
symbol:CRX "Cone-rod homeobox protein" species:9913 "Bos
taurus" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043522 "leucine
zipper domain binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060041
EMBL:AF154123 IPI:IPI00695402 RefSeq:NP_776329.1 UniGene:Bt.283
ProteinModelPortal:Q9XSK0 SMR:Q9XSK0 STRING:Q9XSK0 PRIDE:Q9XSK0
Ensembl:ENSBTAT00000028232 GeneID:280756 KEGG:bta:280756 CTD:1406
eggNOG:NOG324074 GeneTree:ENSGT00700000104128 HOGENOM:HOG000082677
HOVERGEN:HBG004028 InParanoid:Q9XSK0 KO:K09337 OMA:QTKARPA
OrthoDB:EOG4NKBWG NextBio:20804923 Uniprot:Q9XSK0
Length = 299
Score = 140 (54.3 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTP 52
QL ELEA FAK+ YPD+Y REE+A+ QVWF+NRRAK R+Q +Q ++ P
Sbjct: 50 QLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQKQQQQP 107
>UNIPROTKB|F1PR37 [details] [associations]
symbol:CRX "Cone-rod homeobox protein" species:9615 "Canis
lupus familiaris" [GO:0060041 "retina development in camera-type
eye" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043522 "leucine zipper domain binding" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060041
GeneTree:ENSGT00700000104128 OMA:QTKARPA EMBL:AAEX03000828
ProteinModelPortal:F1PR37 Ensembl:ENSCAFT00000006519 Uniprot:F1PR37
Length = 299
Score = 140 (54.3 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 36/86 (41%), Positives = 48/86 (55%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQ-EKQLQKALTPS 53
QL ELEA FAK+ YPD+Y REE+A+ QVWF+NRRAK R+Q ++Q Q+ P
Sbjct: 50 QLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQKQQPQPPG 109
Query: 54 VIPTCNGAMMR-NIYPTTSRGYQPYP 78
A + + P +S P P
Sbjct: 110 AQTKARPAKRKAGMSPRSSSDVCPDP 135
>UNIPROTKB|O43186 [details] [associations]
symbol:CRX "Cone-rod homeobox protein" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0043522 "leucine zipper domain binding"
evidence=IPI] [GO:0009887 "organ morphogenesis" evidence=TAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007601 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0009887 GO:GO:0060041
Orphanet:65 MIM:268000 CTD:1406 eggNOG:NOG324074
HOGENOM:HOG000082677 HOVERGEN:HBG004028 KO:K09337 OMA:QTKARPA
OrthoDB:EOG4NKBWG EMBL:AF024711 EMBL:BT007364 EMBL:AC008745
EMBL:BC016664 EMBL:BC053672 IPI:IPI00011226 RefSeq:NP_000545.1
UniGene:Hs.617342 UniGene:Hs.633434 UniGene:Hs.639114
ProteinModelPortal:O43186 SMR:O43186 IntAct:O43186
MINT:MINT-1442706 STRING:O43186 PhosphoSite:O43186 PRIDE:O43186
DNASU:1406 Ensembl:ENST00000221996 Ensembl:ENST00000539067
Ensembl:ENST00000556900 Ensembl:ENST00000557738 GeneID:1406
KEGG:hsa:1406 UCSC:uc002phq.4 GeneCards:GC19P048327 HGNC:HGNC:2383
HPA:HPA036762 HPA:HPA036763 MIM:120970 MIM:602225 MIM:613829
neXtProt:NX_O43186 PharmGKB:PA26903 InParanoid:O43186
PhylomeDB:O43186 ChiTaRS:CRX GenomeRNAi:1406 NextBio:5749
ArrayExpress:O43186 Bgee:O43186 CleanEx:HS_CRX
Genevestigator:O43186 GermOnline:ENSG00000105392 Uniprot:O43186
Length = 299
Score = 140 (54.3 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTP 52
QL ELEA FAK+ YPD+Y REE+A+ QVWF+NRRAK R+Q +Q ++ P
Sbjct: 50 QLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQKQQQQP 107
>MGI|MGI:1194883 [details] [associations]
symbol:Crx "cone-rod homeobox containing gene" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0043522 "leucine zipper domain
binding" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1194883 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060041
CTD:1406 eggNOG:NOG324074 HOGENOM:HOG000082677 HOVERGEN:HBG004028
KO:K09337 OrthoDB:EOG4NKBWG EMBL:U77615 EMBL:BC016502
IPI:IPI00117762 RefSeq:NP_001106801.1 RefSeq:NP_031796.1
UniGene:Mm.441911 ProteinModelPortal:O54751 SMR:O54751
STRING:O54751 PhosphoSite:O54751 PRIDE:O54751
Ensembl:ENSMUST00000044434 Ensembl:ENSMUST00000174318 GeneID:12951
KEGG:mmu:12951 InParanoid:O54751 NextBio:282658 Bgee:O54751
CleanEx:MM_CRX Genevestigator:O54751 GermOnline:ENSMUSG00000041578
Uniprot:O54751
Length = 299
Score = 140 (54.3 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTP 52
QL ELEA FAK+ YPD+Y REE+A+ QVWF+NRRAK R+Q +Q ++ P
Sbjct: 50 QLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQKQQQQP 107
>UNIPROTKB|G5EE71 [details] [associations]
symbol:vab-3 "MAB-18" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030155 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0040039
GO:GO:0045138 GO:GO:0045165 HSSP:P06601
GeneTree:ENSGT00680000099553 EMBL:Z49937 UniGene:Cel.8982
GeneID:181251 KEGG:cel:CELE_F14F3.1 CTD:181251 NextBio:913106
EMBL:U29184 PIR:S60251 RefSeq:NP_001024572.1 SMR:G5EE71
IntAct:G5EE71 EnsemblMetazoa:F14F3.1c WormBase:F14F3.1c
Uniprot:G5EE71
Length = 296
Score = 124 (48.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQK 48
Q+ LE F ++HYPD++ RE LA QVWF NRRAK+R++EK K
Sbjct: 69 QIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAKWRREEKMRNK 122
Score = 34 (17.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 10/29 (34%), Positives = 11/29 (37%)
Query: 68 PTTSRGYQPYPHPNTINRQHFVILVPGMS 96
PT G+Q P T L GMS
Sbjct: 234 PTNGHGFQQSMSPATTAVGDIPTLSSGMS 262
>WB|WBGene00000458 [details] [associations]
symbol:ceh-37 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009299 "mRNA transcription" evidence=ISS] [GO:0048665 "neuron
fate specification" evidence=IMP] [GO:0000723 "telomere
maintenance" evidence=TAS] [GO:0000781 "chromosome, telomeric
region" evidence=IDA] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0003700 GO:GO:0006357
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008301 GO:GO:0042048
GO:GO:0000784 GO:GO:0048665 GO:GO:0016233 GO:GO:0042162
GeneTree:ENSGT00700000104128 GO:GO:0009299 EMBL:Z81046 PIR:T19813
RefSeq:NP_510366.1 ProteinModelPortal:Q93356 SMR:Q93356
STRING:Q93356 EnsemblMetazoa:C37E2.5 GeneID:181530
KEGG:cel:CELE_C37E2.5 UCSC:C37E2.5 CTD:181530 WormBase:C37E2.5
eggNOG:NOG245767 HOGENOM:HOG000020812 InParanoid:Q93356 OMA:ENLFNET
NextBio:914324 Uniprot:Q93356
Length = 278
Score = 121 (47.7 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQK 48
+QL LE F ++ YPD++ RE +A QVWF+NRRAKYR QEKQ K
Sbjct: 51 QQLEILETLFNETQYPDVFARERVADQIRLQESRIQVWFKNRRAKYRLQEKQKPK 105
Score = 36 (17.7 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 53 SVIPTCNGAM-MRN---IYPTTSRGYQPYPHPNTINRQH 87
S +PT + ++ + N IYP Y Y +P H
Sbjct: 224 SSLPTTSSSLSVYNYPAIYPQWGLDYSTYANPQYAQFSH 262
>UNIPROTKB|Q93356 [details] [associations]
symbol:ceh-37 "Homeobox protein ceh-37" species:6239
"Caenorhabditis elegans" [GO:0016233 "telomere capping"
evidence=NAS] [GO:0032200 "telomere organization" evidence=NAS]
[GO:0008301 "DNA binding, bending" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0042162
"telomeric DNA binding" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0042048 "olfactory
behavior" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008301 GO:GO:0042048 GO:GO:0000784
GO:GO:0048665 GO:GO:0016233 GO:GO:0042162
GeneTree:ENSGT00700000104128 GO:GO:0009299 EMBL:Z81046 PIR:T19813
RefSeq:NP_510366.1 ProteinModelPortal:Q93356 SMR:Q93356
STRING:Q93356 EnsemblMetazoa:C37E2.5 GeneID:181530
KEGG:cel:CELE_C37E2.5 UCSC:C37E2.5 CTD:181530 WormBase:C37E2.5
eggNOG:NOG245767 HOGENOM:HOG000020812 InParanoid:Q93356 OMA:ENLFNET
NextBio:914324 Uniprot:Q93356
Length = 278
Score = 121 (47.7 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQK 48
+QL LE F ++ YPD++ RE +A QVWF+NRRAKYR QEKQ K
Sbjct: 51 QQLEILETLFNETQYPDVFARERVADQIRLQESRIQVWFKNRRAKYRLQEKQKPK 105
Score = 36 (17.7 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 53 SVIPTCNGAM-MRN---IYPTTSRGYQPYPHPNTINRQH 87
S +PT + ++ + N IYP Y Y +P H
Sbjct: 224 SSLPTTSSSLSVYNYPAIYPQWGLDYSTYANPQYAQFSH 262
>FB|FBgn0085369 [details] [associations]
symbol:CG34340 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:AE014134 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048813 GO:GO:0007517
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
RefSeq:NP_001097075.2 UniGene:Dm.12203 ProteinModelPortal:A8DYQ2
SMR:A8DYQ2 GeneID:5740176 KEGG:dme:Dmel_CG34340 FlyBase:FBgn0085369
InParanoid:A8DYQ2 OrthoDB:EOG4NGF3W PhylomeDB:A8DYQ2
GenomeRNAi:5740176 NextBio:20891216 Bgee:A8DYQ2 Uniprot:A8DYQ2
Length = 607
Score = 145 (56.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
+QL ELE AFA++HYPD++ RE+LA+ QVWFQNRRAK+RK E+
Sbjct: 82 QQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAER 132
>UNIPROTKB|I3LJL6 [details] [associations]
symbol:I3LJL6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 Ensembl:ENSSSCT00000023687 OMA:SHAFEAV
Uniprot:I3LJL6
Length = 348
Score = 141 (54.7 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK--QLQKALTP 52
QL ELE F K+HYPD+Y RE+LA +VWFQNRRAK+RK+E+ ++Q+ P
Sbjct: 169 QLEELEKVFQKTHYPDVYAREQLARRGDSVEAPLEVWFQNRRAKWRKRERYGKIQEGRNP 228
>RGD|69361 [details] [associations]
symbol:Uncx "UNC homeobox" species:10116 "Rattus norvegicus"
[GO:0001502 "cartilage condensation" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007389 "pattern
specification process" evidence=IEA;ISO] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0021516 "dorsal spinal cord
development" evidence=IEA;ISO] [GO:0021889 "olfactory bulb
interneuron differentiation" evidence=IEA;ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0035726 "common myeloid
progenitor cell proliferation" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045595
"regulation of cell differentiation" evidence=IEA;ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:69361
GO:GO:0005634 GO:GO:0030154 GO:GO:0045595 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0001502 GO:GO:0007389 HSSP:P06601 GO:GO:0021516
eggNOG:NOG283594 KO:K09328 HOGENOM:HOG000154780 CTD:340260
HOVERGEN:HBG096185 EMBL:D87748 IPI:IPI00208638 RefSeq:NP_058875.1
UniGene:Rn.10710 ProteinModelPortal:P97830 PRIDE:P97830 GeneID:29375
KEGG:rno:29375 UCSC:RGD:69361 InParanoid:P97830 NextBio:608943
Genevestigator:P97830 Uniprot:P97830
Length = 530
Score = 144 (55.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 49/124 (39%), Positives = 63/124 (50%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF +SHYPD++ RE LA+ QVWFQNRRAK+RK+E +K
Sbjct: 120 QLEELEKAFNESHYPDVFMREALAVRLDLVESRVQVWFQNRRAKWRKKENT-KKG----- 173
Query: 55 IPTCNGAMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSS 114
P G N +PTT G +P P I R+ + M + + K L L+ S
Sbjct: 174 -P---GRPAHNSHPTTCSG-EPMD-PEEIARKE----LEKMEKKKRKHEKKL--LKSQSR 221
Query: 115 H-HS 117
H HS
Sbjct: 222 HLHS 225
>UNIPROTKB|P97830 [details] [associations]
symbol:Uncx "Homeobox protein unc-4 homolog" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:69361 GO:GO:0005634 GO:GO:0030154 GO:GO:0045595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001502 GO:GO:0007389 HSSP:P06601
GO:GO:0021516 eggNOG:NOG283594 KO:K09328 HOGENOM:HOG000154780
CTD:340260 HOVERGEN:HBG096185 EMBL:D87748 IPI:IPI00208638
RefSeq:NP_058875.1 UniGene:Rn.10710 ProteinModelPortal:P97830
PRIDE:P97830 GeneID:29375 KEGG:rno:29375 UCSC:RGD:69361
InParanoid:P97830 NextBio:608943 Genevestigator:P97830
Uniprot:P97830
Length = 530
Score = 144 (55.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 49/124 (39%), Positives = 63/124 (50%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF +SHYPD++ RE LA+ QVWFQNRRAK+RK+E +K
Sbjct: 120 QLEELEKAFNESHYPDVFMREALAVRLDLVESRVQVWFQNRRAKWRKKENT-KKG----- 173
Query: 55 IPTCNGAMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSS 114
P G N +PTT G +P P I R+ + M + + K L L+ S
Sbjct: 174 -P---GRPAHNSHPTTCSG-EPMD-PEEIARKE----LEKMEKKKRKHEKKL--LKSQSR 221
Query: 115 H-HS 117
H HS
Sbjct: 222 HLHS 225
>UNIPROTKB|Q8SQ03 [details] [associations]
symbol:CRX "Cone-rod homeobox protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 CTD:1406 eggNOG:NOG324074
HOGENOM:HOG000082677 HOVERGEN:HBG004028 KO:K09337 OrthoDB:EOG4NKBWG
EMBL:AF454668 EMBL:AJ507727 EMBL:AJ507728 EMBL:AJ507729
RefSeq:NP_001003049.1 UniGene:Cfa.94 ProteinModelPortal:Q8SQ03
SMR:Q8SQ03 STRING:Q8SQ03 GeneID:403577 KEGG:cfa:403577
InParanoid:Q8SQ03 NextBio:20817084 Uniprot:Q8SQ03
Length = 299
Score = 139 (54.0 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTP 52
QL ELEA FAK+ YPD+Y REE+A+ QVWF+NRRAK R+Q +Q ++ P
Sbjct: 50 QLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQKEQPQP 107
>UNIPROTKB|G1K361 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AADN02033985
EMBL:AADN02033987 EMBL:AADN02033986 ProteinModelPortal:G1K361
Ensembl:ENSGALT00000033836 Uniprot:G1K361
Length = 214
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL LE F ++HYPD + RE+LA QVWFQNRRAK+R+ E+ + + S+
Sbjct: 105 QLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASL 164
Query: 55 IPTCNGAMMRNIYPTTSRGYQPYPHP 80
+ + +G + P R P P P
Sbjct: 165 LKSYSGDVTAVEQPIVPR---PAPRP 187
>UNIPROTKB|D6RBG8 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
Uniprot:D6RBG8
Length = 118
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 49 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKN 108
Query: 54 VI-PTCNGAM 62
P NG M
Sbjct: 109 GFGPQFNGLM 118
>ZFIN|ZDB-GENE-090313-51 [details] [associations]
symbol:phox2ba "paired-like homeobox 2ba"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-090313-51 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104256 eggNOG:NOG301263 EMBL:BX323984
IPI:IPI00923759 RefSeq:NP_001139175.1 UniGene:Dr.161702
Ensembl:ENSDART00000110517 Ensembl:ENSDART00000141795 GeneID:795258
CTD:795258 HOVERGEN:HBG106787 OMA:SWNESSS NextBio:20932169
Uniprot:B8A4X8
Length = 155
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 30/50 (60%), Positives = 33/50 (66%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEK 44
QL LE AFA + YPDIY REEL QVWFQNRRAK+RKQE+
Sbjct: 24 QLKALERAFAHTQYPDIYTREELVQEIQLTEARVQVWFQNRRAKFRKQER 73
>UNIPROTKB|F1NYC8 [details] [associations]
symbol:PAX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
EMBL:AADN02040715 EMBL:AADN02040716 EMBL:AADN02040717
EMBL:AADN02040718 EMBL:AADN02040719 EMBL:AADN02040720
EMBL:AADN02040721 IPI:IPI00601478 Ensembl:ENSGALT00000013968
ArrayExpress:F1NYC8 Uniprot:F1NYC8
Length = 503
Score = 143 (55.4 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ Q A
Sbjct: 226 EQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNH 285
Query: 54 VIP 56
++P
Sbjct: 286 LLP 288
>MGI|MGI:97491 [details] [associations]
symbol:Pax7 "paired box gene 7" species:10090 "Mus musculus"
[GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=TAS]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0010453
"regulation of cell fate commitment" evidence=IMP] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0014813
"satellite cell commitment" evidence=IMP] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IGI] [GO:0021904
"dorsal/ventral neural tube patterning" evidence=IDA] [GO:0031062
"positive regulation of histone methylation" evidence=IGI;IDA]
[GO:0043393 "regulation of protein binding" evidence=IMP]
[GO:0043403 "skeletal muscle tissue regeneration" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0048663 "neuron fate
commitment" evidence=IGI] [GO:0048706 "embryonic skeletal system
development" evidence=IMP] [GO:0051216 "cartilage development"
evidence=IMP] [GO:0060415 "muscle tissue morphogenesis"
evidence=IGI] [GO:2000288 "positive regulation of myoblast
proliferation" evidence=IMP] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 MGI:MGI:97491
GO:GO:0043565 GO:GO:0043393 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0006338
GO:GO:0051216 GO:GO:0000983 GO:GO:0021527 GO:GO:0048663
GO:GO:0048706 GO:GO:0021904 GO:GO:0043403 GO:GO:0010453
eggNOG:NOG326044 GeneTree:ENSGT00680000099553 KO:K09381
GO:GO:0060415 HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360
HOGENOM:HOG000230939 CTD:5081 OrthoDB:EOG4JM7PH GO:GO:0014813
EMBL:AF254422 EMBL:U20792 IPI:IPI00135693 PIR:I49265
RefSeq:NP_035169.1 UniGene:Mm.218760 ProteinModelPortal:P47239
SMR:P47239 STRING:P47239 PhosphoSite:P47239 PRIDE:P47239
Ensembl:ENSMUST00000030508 GeneID:18509 KEGG:mmu:18509
InParanoid:P47239 NextBio:294240 Bgee:P47239 CleanEx:MM_PAX7
Genevestigator:P47239 GermOnline:ENSMUSG00000028736 Uniprot:P47239
Length = 503
Score = 143 (55.4 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ Q A
Sbjct: 225 EQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNH 284
Query: 54 VIP 56
++P
Sbjct: 285 LLP 287
>RGD|1564360 [details] [associations]
symbol:Pax7 "paired box 7" species:10116 "Rattus norvegicus"
[GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=ISO] [GO:0010453 "regulation of cell fate
commitment" evidence=ISO] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0014813 "satellite cell commitment"
evidence=IEA;ISO] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA;ISO] [GO:0021904 "dorsal/ventral
neural tube patterning" evidence=IEA;ISO] [GO:0031062 "positive
regulation of histone methylation" evidence=ISO] [GO:0043393
"regulation of protein binding" evidence=ISO] [GO:0043403 "skeletal
muscle tissue regeneration" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0048663 "neuron fate commitment"
evidence=IEA;ISO] [GO:0048706 "embryonic skeletal system
development" evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA;ISO] [GO:2000288 "positive regulation of myoblast
proliferation" evidence=ISO] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 RGD:1564360
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0051216 GO:GO:0021527 GO:GO:0048663 GO:GO:0048706
GO:GO:0021904 GO:GO:0043403 GeneTree:ENSGT00680000099553 KO:K09381
GO:GO:0060415 InterPro:IPR022106 Pfam:PF12360 CTD:5081 OMA:NPISASC
OrthoDB:EOG4JM7PH GO:GO:0014813 IPI:IPI00359124
RefSeq:NP_001178913.1 UniGene:Rn.226327 Ensembl:ENSRNOT00000025488
GeneID:500574 KEGG:rno:500574 NextBio:706635 Uniprot:D3ZRA8
Length = 503
Score = 143 (55.4 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ Q A
Sbjct: 225 EQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNH 284
Query: 54 VIP 56
++P
Sbjct: 285 LLP 287
>UNIPROTKB|E1BKL5 [details] [associations]
symbol:PAX7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060415 "muscle
tissue morphogenesis" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IEA] [GO:0043403 "skeletal muscle tissue regeneration"
evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0014813 "satellite cell
commitment" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0021527
GO:GO:0048663 GO:GO:0048706 GO:GO:0021904 GO:GO:0043403
GeneTree:ENSGT00680000099553 KO:K09381 GO:GO:0060415
InterPro:IPR022106 Pfam:PF12360 CTD:5081 OMA:NPISASC GO:GO:0014813
EMBL:DAAA02006543 EMBL:DAAA02006544 EMBL:DAAA02006545
EMBL:DAAA02006546 EMBL:DAAA02006547 IPI:IPI00707033
RefSeq:XP_002685784.1 RefSeq:XP_616352.3 Ensembl:ENSBTAT00000019924
GeneID:536229 KEGG:bta:536229 NextBio:20876914 Uniprot:E1BKL5
Length = 505
Score = 143 (55.4 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ Q A
Sbjct: 227 EQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNH 286
Query: 54 VIP 56
++P
Sbjct: 287 LLP 289
>UNIPROTKB|F1PNX6 [details] [associations]
symbol:PAX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
OMA:NPISASC EMBL:AAEX03001818 EMBL:AAEX03001819 EMBL:AAEX03001820
EMBL:AAEX03001821 EMBL:AAEX03001822 Ensembl:ENSCAFT00000024687
Uniprot:F1PNX6
Length = 505
Score = 143 (55.4 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ Q A
Sbjct: 227 EQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNH 286
Query: 54 VIP 56
++P
Sbjct: 287 LLP 289
>UNIPROTKB|E9PFV9 [details] [associations]
symbol:PAX7 "Paired box protein Pax-7" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09381
InterPro:IPR022106 Pfam:PF12360 EMBL:AL021528 RefSeq:NP_001128726.1
UniGene:Hs.113253 GeneID:5081 KEGG:hsa:5081 CTD:5081 HGNC:HGNC:8621
GenomeRNAi:5081 NextBio:19602 IPI:IPI00719545
ProteinModelPortal:E9PFV9 SMR:E9PFV9 PRIDE:E9PFV9
Ensembl:ENST00000420770 UCSC:uc010oct.2 ArrayExpress:E9PFV9
Bgee:E9PFV9 Uniprot:E9PFV9
Length = 505
Score = 143 (55.4 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ Q A
Sbjct: 227 EQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNH 286
Query: 54 VIP 56
++P
Sbjct: 287 LLP 289
>ZFIN|ZDB-GENE-990415-201 [details] [associations]
symbol:pax7a "paired box gene 7a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0048066 "developmental pigmentation"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389
ZFIN:ZDB-GENE-990415-201 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048066 HSSP:P06601
HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360 EMBL:AF014368
EMBL:BC163502 EMBL:BC163523 EMBL:BX957335 IPI:IPI00510646
RefSeq:NP_571400.1 UniGene:Dr.150230 UniGene:Dr.75807 SMR:O57418
GeneID:30587 KEGG:dre:30587 CTD:30587 InParanoid:O57418
NextBio:20806957 Uniprot:O57418
Length = 507
Score = 143 (55.4 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ Q A
Sbjct: 230 EQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNH 289
Query: 54 VIP 56
++P
Sbjct: 290 LLP 292
>UNIPROTKB|I3L874 [details] [associations]
symbol:UNCX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104564
EMBL:CU928407 Ensembl:ENSSSCT00000029725 Uniprot:I3L874
Length = 518
Score = 143 (55.4 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 49/124 (39%), Positives = 63/124 (50%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF +SHYPD++ RE LA+ QVWFQNRRAK+RK+E +K
Sbjct: 121 QLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQNRRAKWRKKENT-KKG----- 174
Query: 55 IPTCNGAMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSS 114
P G N +PTT G +P P I R+ + M + + K L L+ S
Sbjct: 175 -P---GRPAHNSHPTTCSG-EPMD-PEEIARKE----LEKMEKKKRKHEKKL--LKSQSR 222
Query: 115 H-HS 117
H HS
Sbjct: 223 HLHS 226
>UNIPROTKB|P23759 [details] [associations]
symbol:PAX7 "Paired box protein Pax-7" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0014813 "satellite cell commitment" evidence=IEA]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
evidence=IEA] [GO:0043403 "skeletal muscle tissue regeneration"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048706 "embryonic skeletal system development" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=TAS] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
GO:GO:0043066 EMBL:CH471134 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0009653
GO:GO:0021527 GO:GO:0048663 GO:GO:0048706 GO:GO:0021904
GO:GO:0043403 MIM:268220 Orphanet:99756 eggNOG:NOG326044 KO:K09381
GO:GO:0060415 HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360
HOGENOM:HOG000230939 EMBL:X96743 EMBL:X96744 EMBL:X15042
EMBL:X15250 EMBL:X15251 EMBL:X96745 EMBL:X96746 EMBL:X96747
EMBL:X96748 EMBL:AL021528 EMBL:BC121165 EMBL:BC121166 EMBL:Z35141
IPI:IPI00004431 IPI:IPI00012894 PIR:S78502 RefSeq:NP_001128726.1
RefSeq:NP_002575.1 RefSeq:NP_039236.1 UniGene:Hs.113253
ProteinModelPortal:P23759 SMR:P23759 IntAct:P23759
MINT:MINT-7241806 STRING:P23759 PhosphoSite:P23759 DMDM:8247951
PaxDb:P23759 PRIDE:P23759 Ensembl:ENST00000375375
Ensembl:ENST00000400661 GeneID:5081 KEGG:hsa:5081 UCSC:uc001bay.3
UCSC:uc001baz.3 CTD:5081 GeneCards:GC01P018957 HGNC:HGNC:8621
MIM:167410 neXtProt:NX_P23759 PharmGKB:PA32961 InParanoid:P23759
OMA:NPISASC OrthoDB:EOG4JM7PH PhylomeDB:P23759 GenomeRNAi:5081
NextBio:19602 ArrayExpress:P23759 Bgee:P23759 CleanEx:HS_PAX7
Genevestigator:P23759 GermOnline:ENSG00000009709 GO:GO:0014813
Uniprot:P23759
Length = 520
Score = 143 (55.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ Q A
Sbjct: 227 EQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNH 286
Query: 54 VIP 56
++P
Sbjct: 287 LLP 289
>UNIPROTKB|F1RIW6 [details] [associations]
symbol:UNCX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045595 "regulation
of cell differentiation" evidence=IEA] [GO:0035726 "common myeloid
progenitor cell proliferation" evidence=IEA] [GO:0021889 "olfactory
bulb interneuron differentiation" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0007389 "pattern
specification process" evidence=IEA] [GO:0001502 "cartilage
condensation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045595
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0001502 GO:GO:0007389 GO:GO:0021516
GeneTree:ENSGT00700000104564 OMA:MMDGRLL EMBL:CU928407
Ensembl:ENSSSCT00000008287 Uniprot:F1RIW6
Length = 523
Score = 143 (55.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 49/124 (39%), Positives = 63/124 (50%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF +SHYPD++ RE LA+ QVWFQNRRAK+RK+E +K
Sbjct: 121 QLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQNRRAKWRKKENT-KKG----- 174
Query: 55 IPTCNGAMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSS 114
P G N +PTT G +P P I R+ + M + + K L L+ S
Sbjct: 175 -P---GRPAHNSHPTTCSG-EPMD-PEEIARKE----LEKMEKKKRKHEKKL--LKSQSR 222
Query: 115 H-HS 117
H HS
Sbjct: 223 HLHS 226
>UNIPROTKB|O42349 [details] [associations]
symbol:Pax-7 "PAX7 protein" species:9031 "Gallus gallus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:0014813 "satellite cell commitment" evidence=ISS]
[GO:0043403 "skeletal muscle tissue regeneration" evidence=ISS]
[GO:0048706 "embryonic skeletal system development" evidence=ISS]
[GO:0007519 "skeletal muscle tissue development" evidence=ISS]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051216
GO:GO:0048706 GO:GO:0021904 GO:GO:0043403 HSSP:P06601
GeneTree:ENSGT00680000099553 KO:K09381 HOVERGEN:HBG009115
InterPro:IPR022106 Pfam:PF12360 HOGENOM:HOG000230939 CTD:5081
OMA:NPISASC GO:GO:0014813 EMBL:AADN02040715 EMBL:AADN02040716
EMBL:AADN02040717 EMBL:AADN02040718 EMBL:AADN02040719
EMBL:AADN02040720 EMBL:AADN02040721 EMBL:D87838 IPI:IPI00586304
RefSeq:NP_990396.1 UniGene:Gga.555 SMR:O42349 STRING:O42349
Ensembl:ENSGALT00000006002 GeneID:395942 KEGG:gga:395942
InParanoid:O42349 NextBio:20816007 Uniprot:O42349
Length = 524
Score = 143 (55.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPS 53
EQL ELE AF ++HYPDIY REELA QVWF NRRA++RKQ Q A
Sbjct: 225 EQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNH 284
Query: 54 VIP 56
++P
Sbjct: 285 LLP 287
>MGI|MGI:108013 [details] [associations]
symbol:Uncx "UNC homeobox" species:10090 "Mus musculus"
[GO:0001502 "cartilage condensation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0021516 "dorsal spinal cord development"
evidence=IMP] [GO:0021889 "olfactory bulb interneuron
differentiation" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0035726 "common myeloid progenitor cell
proliferation" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045595 "regulation of cell
differentiation" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:108013 GO:GO:0005634
GO:GO:0045595 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001502 GO:GO:0007389
GO:GO:0010468 GO:GO:0021889 HSSP:P06601 GO:GO:0021516 GO:GO:0035726
eggNOG:NOG283594 GeneTree:ENSGT00700000104564 KO:K09328
HOGENOM:HOG000154780 CTD:340260 HOVERGEN:HBG096185 OMA:MMDGRLL
EMBL:AJ001116 EMBL:AF247550 EMBL:BC051973 EMBL:Z96107 EMBL:AH006754
IPI:IPI00117219 RefSeq:NP_038730.1 UniGene:Mm.42190
ProteinModelPortal:O08934 SMR:O08934 STRING:O08934
PhosphoSite:O08934 PRIDE:O08934 Ensembl:ENSMUST00000031523
GeneID:22255 KEGG:mmu:22255 UCSC:uc009agv.1 InParanoid:O08934
NextBio:302335 Bgee:O08934 Genevestigator:O08934 Uniprot:O08934
Length = 530
Score = 143 (55.4 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 49/124 (39%), Positives = 63/124 (50%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF +SHYPD++ RE LA+ QVWFQNRRAK+RK+E +K
Sbjct: 120 QLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQNRRAKWRKKENT-KKG----- 173
Query: 55 IPTCNGAMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSS 114
P G N +PTT G +P P I R+ + M + + K L L+ S
Sbjct: 174 -P---GRPAHNSHPTTCSG-EPMD-PEEIARKE----LEKMEKKKRKHEKKL--LKSQSR 221
Query: 115 H-HS 117
H HS
Sbjct: 222 HLHS 225
>UNIPROTKB|E2R5H2 [details] [associations]
symbol:UNCX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0045595
"regulation of cell differentiation" evidence=IEA] [GO:0035726
"common myeloid progenitor cell proliferation" evidence=IEA]
[GO:0021889 "olfactory bulb interneuron differentiation"
evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045595 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001502
GO:GO:0007389 GO:GO:0021516 GeneTree:ENSGT00700000104564
OMA:MMDGRLL EMBL:AAEX03004348 Ensembl:ENSCAFT00000018714
Uniprot:E2R5H2
Length = 538
Score = 143 (55.4 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 49/124 (39%), Positives = 63/124 (50%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTPSV 54
QL ELE AF +SHYPD++ RE LA+ QVWFQNRRAK+RK+E +K
Sbjct: 120 QLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQNRRAKWRKKENT-KKG----- 173
Query: 55 IPTCNGAMMRNIYPTTSRGYQPYPHPNTINRQHFVILVPGMSTEDEWYNKSLSALRMNSS 114
P G N +PTT G +P P I R+ + M + + K L L+ S
Sbjct: 174 -P---GRPAHNSHPTTCSG-EPMD-PEEIARKE----LEKMEKKKRKHEKKL--LKSQSR 221
Query: 115 H-HS 117
H HS
Sbjct: 222 HLHS 225
>UNIPROTKB|F1MMA8 [details] [associations]
symbol:LOC506388 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
OMA:CCEAPKK EMBL:DAAA02013790 IPI:IPI00686698
Ensembl:ENSBTAT00000010095 Uniprot:F1MMA8
Length = 246
Score = 135 (52.6 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 36/79 (45%), Positives = 44/79 (55%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK-------QL 46
EQL ELE F +HYPDI+ R +LA Q+WFQN+RAK+RKQEK QL
Sbjct: 82 EQLQELEKVFHFTHYPDIHVRNQLAARINLPEARVQIWFQNQRAKWRKQEKTNSLGALQL 141
Query: 47 --QKALTPSVIPTCNGAMM 63
+ L PS P G M+
Sbjct: 142 PSEAGLAPSTNPDVAGPML 160
>UNIPROTKB|D6RFI4 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 EMBL:AC017068
HOGENOM:HOG000273886 HGNC:HGNC:9005 ChiTaRS:PITX2 IPI:IPI00968016
ProteinModelPortal:D6RFI4 SMR:D6RFI4 Ensembl:ENST00000511837
ArrayExpress:D6RFI4 Bgee:D6RFI4 Uniprot:D6RFI4
Length = 290
Score = 137 (53.3 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQKALTPS 53
+QL ELEA F ++ YPD+ REE+A+ +VWF+NRRAK+RK+E+ Q L +
Sbjct: 95 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKN 154
Query: 54 VI-PTCNGAMMR--NIYP 68
P NG M ++YP
Sbjct: 155 GFGPQFNGLMQPYDDMYP 172
>UNIPROTKB|F1RLA3 [details] [associations]
symbol:CRX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043522 "leucine
zipper domain binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060041
GeneTree:ENSGT00700000104128 KO:K09337 OMA:QTKARPA
UniGene:Ssc.17775 EMBL:FP102640 RefSeq:XP_003127313.1
Ensembl:ENSSSCT00000003465 GeneID:100520079 KEGG:ssc:100520079
Uniprot:F1RLA3
Length = 299
Score = 137 (53.3 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTP 52
QL ELE+ FAK+ YPD+Y REE+A+ QVWF+NRRAK R+Q +Q ++ P
Sbjct: 50 QLEELESLFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQKQQQQP 107
>UNIPROTKB|F1N9J8 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104128 EMBL:AADN02012643
IPI:IPI00683833 Ensembl:ENSGALT00000016994 Uniprot:F1N9J8
Length = 303
Score = 137 (53.3 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 1 EQLAELEAAFAKSHYPDIYCREELAIL-------FQVWFQNRRAKYRKQEKQLQK 48
+QL LE F K+HYPD+ RE LA+ QVWF+NRRAK+RK+++ LQK
Sbjct: 78 QQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQK 132
>UNIPROTKB|A6NJT0 [details] [associations]
symbol:UNCX "Homeobox protein unc-4 homolog" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001502 "cartilage
condensation" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0021889 "olfactory bulb interneuron
differentiation" evidence=IEA] [GO:0035726 "common myeloid
progenitor cell proliferation" evidence=IEA] [GO:0045595
"regulation of cell differentiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030154 GO:GO:0045595
GO:GO:0043565 EMBL:CH236953 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001502 GO:GO:0007389
GO:GO:0021516 eggNOG:NOG283594 KO:K09328 HOGENOM:HOG000154780
EMBL:AC073094 IPI:IPI00894170 RefSeq:NP_001073930.1
UniGene:Hs.232272 ProteinModelPortal:A6NJT0 SMR:A6NJT0
STRING:A6NJT0 PhosphoSite:A6NJT0 PRIDE:A6NJT0
Ensembl:ENST00000316333 GeneID:340260 KEGG:hsa:340260
UCSC:uc011jvw.2 CTD:340260 GeneCards:GC07P001272 HGNC:HGNC:33194
neXtProt:NX_A6NJT0 PharmGKB:PA162408642 HOVERGEN:HBG096185
InParanoid:A6NJT0 OMA:MMDGRLL GenomeRNAi:340260 NextBio:97758
Bgee:A6NJT0 CleanEx:HS_UNCX Genevestigator:A6NJT0 Uniprot:A6NJT0
Length = 531
Score = 141 (54.7 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 35/72 (48%), Positives = 43/72 (59%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTP-- 52
QL ELE AF +SHYPD++ RE LA+ QVWFQNRRAK+RK+E + P
Sbjct: 116 QLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQNRRAKWRKKENTKKGPGRPAH 175
Query: 53 -SVIPTCNGAMM 63
S TC+G M
Sbjct: 176 NSHPTTCSGEPM 187
>UNIPROTKB|G1K2Z3 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:WGSAAPY EMBL:AADN02033985 EMBL:AADN02033987 EMBL:AADN02033986
Ensembl:ENSGALT00000005264 Uniprot:G1K2Z3
Length = 245
Score = 134 (52.2 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL LE F ++HYPD + RE+LA QVWFQNRRAK+R+ E+ + + S+
Sbjct: 105 QLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASL 164
Query: 55 IPTCNGAMMRNIYPTTSRGYQPYPHP 80
+ + +G + P R P P P
Sbjct: 165 LKSYSGDVTAVEQPIVPR---PAPRP 187
>UNIPROTKB|Q05437 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG267226
EMBL:D13433 EMBL:S69088 IPI:IPI00592701 PIR:I51226
RefSeq:NP_001007822.1 UniGene:Gga.1546 ProteinModelPortal:Q05437
SMR:Q05437 IntAct:Q05437 STRING:Q05437 GeneID:373941
KEGG:gga:373941 CTD:5396 HOVERGEN:HBG021349 InParanoid:Q05437
KO:K09329 OrthoDB:EOG4RR6J8 NextBio:20813473 Uniprot:Q05437
Length = 245
Score = 134 (52.2 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL LE F ++HYPD + RE+LA QVWFQNRRAK+R+ E+ + + S+
Sbjct: 105 QLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASL 164
Query: 55 IPTCNGAMMRNIYPTTSRGYQPYPHP 80
+ + +G + P R P P P
Sbjct: 165 LKSYSGDVTAVEQPIVPR---PAPRP 187
>UNIPROTKB|P32242 [details] [associations]
symbol:OTX1 "Homeobox protein OTX1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0022037 "metencephalon
development" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0048852 "diencephalon morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
InterPro:IPR001356 InterPro:IPR003025 InterPro:IPR003026
InterPro:IPR009057 InterPro:IPR013851 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255 PRINTS:PR01256
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 EMBL:CH471053 GO:GO:0009952 GO:GO:0043565
GO:GO:0030900 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030901 HOVERGEN:HBG004028
EMBL:AC009501 eggNOG:NOG245767 KO:K09326 OMA:PMTASSM EMBL:AK095680
EMBL:BC007621 IPI:IPI00027682 PIR:S39406 RefSeq:NP_001186699.1
RefSeq:NP_055377.1 UniGene:Hs.734360 ProteinModelPortal:P32242
SMR:P32242 IntAct:P32242 MINT:MINT-1437362 STRING:P32242
PhosphoSite:P32242 DMDM:417425 PaxDb:P32242 PRIDE:P32242 DNASU:5013
Ensembl:ENST00000282549 Ensembl:ENST00000366671 GeneID:5013
KEGG:hsa:5013 UCSC:uc002scd.3 CTD:5013 GeneCards:GC02P063277
HGNC:HGNC:8521 HPA:CAB012341 MIM:600036 neXtProt:NX_P32242
PharmGKB:PA32848 InParanoid:P32242 PhylomeDB:P32242 GenomeRNAi:5013
NextBio:19298 ArrayExpress:P32242 Bgee:P32242 CleanEx:HS_OTX1
Genevestigator:P32242 GermOnline:ENSG00000115507 Uniprot:P32242
Length = 354
Score = 122 (48.0 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL LEA FAK+ YPDI+ REE+A+ QVWF+NRRAK R+Q++
Sbjct: 49 QLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Score = 35 (17.4 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 111 MNSSHHSNLATPM 123
M+S HH + +PM
Sbjct: 255 MHSHHHPHQLSPM 267
>UNIPROTKB|G3V2N3 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:Z97200 HGNC:HGNC:9142 ChiTaRS:PRRX1
ProteinModelPortal:G3V2N3 SMR:G3V2N3 Ensembl:ENST00000497230
ArrayExpress:G3V2N3 Bgee:G3V2N3 Uniprot:G3V2N3
Length = 200
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 32/86 (37%), Positives = 45/86 (52%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL LE F ++HYPD + RE+LA QVWFQNRRAK+R+ E+ + S+
Sbjct: 105 QLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLANKNASL 164
Query: 55 IPTCNGAMMRNIYPTTSRGYQPYPHP 80
+ + +G + P R P P P
Sbjct: 165 LKSYSGDVTAVEQPIVPR---PAPRP 187
>UNIPROTKB|G3V3J3 [details] [associations]
symbol:OTX2 "Homeobox protein OTX2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AL161757 HGNC:HGNC:8522
ProteinModelPortal:G3V3J3 SMR:G3V3J3 Ensembl:ENST00000555804
ArrayExpress:G3V3J3 Bgee:G3V3J3 Uniprot:G3V3J3
Length = 163
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 31/62 (50%), Positives = 39/62 (62%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEKQLQKALTPSV 54
QL LEA FAK+ YPDI+ REE+A+ QVWF+NRRAK R+Q++Q Q V
Sbjct: 49 QLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKV 108
Query: 55 IP 56
P
Sbjct: 109 RP 110
>UNIPROTKB|F1RSD4 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
EMBL:CU138499 Ensembl:ENSSSCT00000006879 Uniprot:F1RSD4
Length = 141
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 32/86 (37%), Positives = 45/86 (52%)
Query: 2 QLAELEAAFAKSHYPDIYCREELA-------ILFQVWFQNRRAKYRKQEKQLQKALTPSV 54
QL LE F ++HYPD + RE+LA QVWFQNRRAK+R+ E+ + S+
Sbjct: 27 QLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLANKNASL 86
Query: 55 IPTCNGAMMRNIYPTTSRGYQPYPHP 80
+ + +G + P R P P P
Sbjct: 87 LKSYSGDVTAVEQPIVPR---PAPRP 109
>UNIPROTKB|E1BL43 [details] [associations]
symbol:OTX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048852
"diencephalon morphogenesis" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0022037 "metencephalon development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003025
InterPro:IPR003026 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
PRINTS:PR01256 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0030900
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0042472 GO:GO:0030901 GeneTree:ENSGT00700000104128 KO:K09326
OMA:PMTASSM CTD:5013 EMBL:DAAA02031400 IPI:IPI00702366
RefSeq:NP_001192946.1 UniGene:Bt.112398 Ensembl:ENSBTAT00000008893
GeneID:540628 KEGG:bta:540628 NextBio:20878739 Uniprot:E1BL43
Length = 355
Score = 122 (48.0 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL LEA FAK+ YPDI+ REE+A+ QVWF+NRRAK R+Q++
Sbjct: 49 QLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Score = 35 (17.4 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 111 MNSSHHSNLATPM 123
M+S HH + +PM
Sbjct: 256 MHSHHHPHQLSPM 268
>UNIPROTKB|J9P273 [details] [associations]
symbol:OTX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003025
InterPro:IPR003026 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
PRINTS:PR01256 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104128
KO:K09326 OMA:PMTASSM CTD:5013 EMBL:AAEX03007570 RefSeq:XP_852530.1
Ensembl:ENSCAFT00000048634 GeneID:610347 KEGG:cfa:610347
Uniprot:J9P273
Length = 355
Score = 122 (48.0 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL LEA FAK+ YPDI+ REE+A+ QVWF+NRRAK R+Q++
Sbjct: 49 QLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Score = 35 (17.4 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 111 MNSSHHSNLATPM 123
M+S HH + +PM
Sbjct: 256 MHSHHHPHQLSPM 268
>MGI|MGI:97450 [details] [associations]
symbol:Otx1 "orthodenticle homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0022037 "metencephalon development" evidence=IGI] [GO:0030900
"forebrain development" evidence=IGI] [GO:0030901 "midbrain
development" evidence=IGI] [GO:0042472 "inner ear morphogenesis"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IGI] InterPro:IPR001356 InterPro:IPR003025
InterPro:IPR003026 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
PRINTS:PR01256 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97450 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0042472 GO:GO:0030901 HOGENOM:HOG000082677 HOVERGEN:HBG004028
eggNOG:NOG245767 KO:K09326 GO:GO:0022037 OMA:PMTASSM CTD:5013
EMBL:BC057105 EMBL:BC058354 EMBL:X68883 IPI:IPI00115479 PIR:S35345
RefSeq:NP_035153.1 UniGene:Mm.129663 ProteinModelPortal:P80205
SMR:P80205 STRING:P80205 PhosphoSite:P80205 PRIDE:P80205
Ensembl:ENSMUST00000006071 GeneID:18423 KEGG:mmu:18423
InParanoid:P80205 NextBio:294076 Bgee:P80205 CleanEx:MM_OTX1
Genevestigator:P80205 GermOnline:ENSMUSG00000005917 GO:GO:0048852
Uniprot:P80205
Length = 355
Score = 122 (48.0 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL LEA FAK+ YPDI+ REE+A+ QVWF+NRRAK R+Q++
Sbjct: 49 QLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Score = 35 (17.4 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 111 MNSSHHSNLATPM 123
M+S HH + +PM
Sbjct: 255 MHSHHHPHQLSPM 267
>RGD|3237 [details] [associations]
symbol:Otx1 "orthodenticle homeobox 1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0022037 "metencephalon development"
evidence=ISO] [GO:0030900 "forebrain development" evidence=ISO]
[GO:0030901 "midbrain development" evidence=ISO] [GO:0042472 "inner
ear morphogenesis" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=ISO] InterPro:IPR001356 InterPro:IPR003025
InterPro:IPR003026 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
PRINTS:PR01256 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3237
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOVERGEN:HBG004028 eggNOG:NOG245767
KO:K09326 CTD:5013 EMBL:L32602 EMBL:S81924 IPI:IPI00208962 PIR:I56547
RefSeq:NP_037241.1 UniGene:Rn.33443 ProteinModelPortal:Q63410
SMR:Q63410 STRING:Q63410 GeneID:25646 KEGG:rno:25646 UCSC:RGD:3237
NextBio:607503 Genevestigator:Q63410 Uniprot:Q63410
Length = 355
Score = 122 (48.0 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL LEA FAK+ YPDI+ REE+A+ QVWF+NRRAK R+Q++
Sbjct: 49 QLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Score = 35 (17.4 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 111 MNSSHHSNLATPM 123
M+S HH + +PM
Sbjct: 255 MHSHHHPHQLSPM 267
>UNIPROTKB|Q63410 [details] [associations]
symbol:Otx1 "Homeobox protein OTX1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003025 InterPro:IPR003026 InterPro:IPR009057
InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
PRINTS:PR01255 PRINTS:PR01256 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:3237 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HOVERGEN:HBG004028
eggNOG:NOG245767 KO:K09326 CTD:5013 EMBL:L32602 EMBL:S81924
IPI:IPI00208962 PIR:I56547 RefSeq:NP_037241.1 UniGene:Rn.33443
ProteinModelPortal:Q63410 SMR:Q63410 STRING:Q63410 GeneID:25646
KEGG:rno:25646 UCSC:RGD:3237 NextBio:607503 Genevestigator:Q63410
Uniprot:Q63410
Length = 355
Score = 122 (48.0 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL LEA FAK+ YPDI+ REE+A+ QVWF+NRRAK R+Q++
Sbjct: 49 QLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Score = 35 (17.4 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 111 MNSSHHSNLATPM 123
M+S HH + +PM
Sbjct: 255 MHSHHHPHQLSPM 267
>UNIPROTKB|F1SIW9 [details] [associations]
symbol:OTX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048852
"diencephalon morphogenesis" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0022037 "metencephalon development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003025
InterPro:IPR003026 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
PRINTS:PR01256 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0030900
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0042472 GO:GO:0030901 GeneTree:ENSGT00700000104128 KO:K09326
OMA:PMTASSM EMBL:CU928835 RefSeq:XP_003125144.1
Ensembl:ENSSSCT00000009166 GeneID:100520485 KEGG:ssc:100520485
Uniprot:F1SIW9
Length = 356
Score = 122 (48.0 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 2 QLAELEAAFAKSHYPDIYCREELAILF-------QVWFQNRRAKYRKQEK 44
QL LEA FAK+ YPDI+ REE+A+ QVWF+NRRAK R+Q++
Sbjct: 49 QLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Score = 35 (17.4 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 111 MNSSHHSNLATPM 123
M+S HH + +PM
Sbjct: 256 MHSHHHPHQLSPM 268
WARNING: HSPs involving 181 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.130 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 128 128 0.00091 102 3 11 22 0.38 31
29 0.41 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 431
No. of states in DFA: 598 (64 KB)
Total size of DFA: 145 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 13.35u 0.07s 13.42t Elapsed: 00:00:07
Total cpu time: 13.38u 0.08s 13.46t Elapsed: 00:00:08
Start: Thu Aug 15 14:44:22 2013 End: Thu Aug 15 14:44:30 2013
WARNINGS ISSUED: 2