BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy340
(125 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55EH8|ABCGN_DICDI ABC transporter G family member 23 OS=Dictyostelium discoideum
GN=abcG23 PE=3 SV=2
Length = 701
Score = 88.6 bits (218), Expect = 9e-18, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 64/102 (62%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGEFS 82
L+G+SG GKTT+L I+G+ + + G + V G +P KGS +PG VGY PQ++ LY E +
Sbjct: 37 LIGSSGSGKTTILKTILGKLKQDDGIVQVFGKEPCGKGSEIPGSSVGYAPQDVCLYNEIT 96
Query: 83 IKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQSRLVKNL 124
I+ET+ +F I M E + L+ L+LPS S+++ L
Sbjct: 97 IEETLSFFASIHRMPKDEYIKKRDSLVEILELPSLSKIISEL 138
>sp|Q8T674|ABCGK_DICDI ABC transporter G family member 20 OS=Dictyostelium discoideum
GN=abcG20 PE=3 SV=1
Length = 730
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGEFS 82
L+GASG GKTT+L I+GR ++GE+ V G +P G GVPG G+ PQE ALY + +
Sbjct: 45 LIGASGSGKTTILRTILGRLIPDSGEVLVFGKRPHDIG-GVPGSICGFCPQEGALYYDLT 103
Query: 83 IKETMMYFGWIFGMETPEIDDRLQFLLNFLDLP 115
+ T+ +F + + + + + ++ LDLP
Sbjct: 104 LDHTLNFFSNVHQIPKDKFESKKNEIIKLLDLP 136
>sp|P72335|NODI_RHIS3 Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain
N33) GN=nodI PE=3 SV=1
Length = 304
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+GLLG +G GK+T+ ++G + G+I VLG G + S + K +G +PQ L E
Sbjct: 34 FGLLGPNGAGKSTIARMLLGMTVPDAGKITVLGEPVGAR-SRLARKSIGVVPQFDNLDQE 92
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
F+++E ++ FG FGM T +I + + LL F L S++
Sbjct: 93 FTVRENLLVFGRYFGMSTRKIKEVIPSLLEFARLESKA 130
>sp|P94440|YFIL_BACSU Uncharacterized ABC transporter ATP-binding protein YfiL
OS=Bacillus subtilis (strain 168) GN=yfiL PE=3 SV=2
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 16 KKKKKYGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEI 75
KK + +GLLG +G GK+T +S I G ++G I V GG K + +++G +PQEI
Sbjct: 25 KKGESFGLLGPNGAGKSTTISMISGLVPHDSGNITV-GGYVIGKETAKAKQKIGIVPQEI 83
Query: 76 ALYGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQSR 119
ALY + E +M++G ++G+ E R +L ++ L +++
Sbjct: 84 ALYPTLTAHENLMFWGKMYGLTHGEAKKRAAEVLEYVGLTERAK 127
>sp|P55476|NODI_RHISN Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain
NGR234) GN=nodI PE=3 SV=1
Length = 343
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+GLLG +G GK+T+ ++G + G I VLG +P + + R+G +PQ L E
Sbjct: 73 FGLLGPNGAGKSTVSRLVLGLAPPDEGTITVLG-EPVPARARLARSRIGVVPQFDTLDRE 131
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
F+ +E ++ FG FG+ T E+++ + LL+F L S++
Sbjct: 132 FTARENLLVFGRYFGLHTRELEEAIPPLLDFARLESKA 169
>sp|O52618|NODI_RHIME Nod factor export ATP-binding protein I OS=Rhizobium meliloti
(strain 1021) GN=nodI PE=3 SV=3
Length = 335
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+GLLG +G GK+T+ I+G TGEI VLG P + + R+G +PQ L E
Sbjct: 65 FGLLGPNGAGKSTITRMILGMTTPGTGEITVLG-VPVPSRARLARMRIGVVPQFDNLDLE 123
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
F+++E ++ FG F M T EI+ + LL F L +++
Sbjct: 124 FTVRENLLVFGRYFRMSTREIEAVIPSLLEFARLENKA 161
>sp|P37624|YHIH_ECOLI Uncharacterized ABC transporter ATP-binding protein YhiH
OS=Escherichia coli (strain K12) GN=yhiH PE=3 SV=3
Length = 911
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+G LG++GCGK+T + + G + GE W+ G+P +RVGYM Q +LY E
Sbjct: 305 FGFLGSNGCGKSTTMKMLTGLLPASEGEAWLF-GQPVDPKDIDTRRRVGYMSQAFSLYNE 363
Query: 81 FSIKETMMYFGWIFGMETPEIDDRL 105
++++ + +F + EI R+
Sbjct: 364 LTVRQNLELHARLFHIPEAEIPARV 388
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 22 GLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGG---KPGTKGSGVPGKRVGYMPQEIA-- 76
GL+G G GK++LLS I G R + G + VLGG P + P R+ +MPQ +
Sbjct: 42 GLIGPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPKHRRDVCP--RIAWMPQGLGKN 99
Query: 77 LYGEFSIKETMMYFGWIFGMETPEIDDRLQFLLN------FLDLPS 116
LY S+ E + +F +FG + E + R+ LL F D P+
Sbjct: 100 LYHTLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPA 145
>sp|Q1LKJ2|NODI_RALME Nod factor export ATP-binding protein I OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=nodI PE=3 SV=1
Length = 303
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+GLLG +G GKTT L ++G +G + +L G+P + + RVG +PQ L +
Sbjct: 33 FGLLGPNGAGKTTTLRMLLGLTTPASGTL-MLCGEPIPQRAPQARMRVGVVPQFDNLDPD 91
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
FS+ E + FG FG+ + +I +R+ LL F L S++
Sbjct: 92 FSVIENLRIFGRYFGLSSAQIAERVPKLLEFARLESRA 129
>sp|Q8KLG1|NODI_RHIEC Nod factor export ATP-binding protein I OS=Rhizobium etli (strain
CFN 42 / ATCC 51251) GN=nodI PE=3 SV=3
Length = 316
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+GLLG +G GK+T+ I+G + G+I VLG P + + K +G +PQ L E
Sbjct: 46 FGLLGPNGAGKSTIARMILGMTAPDAGKITVLG-VPVPAQARLARKGIGVVPQFDNLEPE 104
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQ 117
F+++E ++ + FGM T +++ + LL F L S+
Sbjct: 105 FTVRENLLVYSRYFGMNTRKVEAVMSSLLEFARLESK 141
>sp|Q39GT7|NODI_BURS3 Nod factor export ATP-binding protein I OS=Burkholderia sp. (strain
383) GN=nodI PE=3 SV=2
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
YGLLG +G GKTT L ++G + G I L G+P + +RVG +PQ L +
Sbjct: 34 YGLLGPNGAGKTTTLKMLLGLTHPDAGTIS-LCGEPVPSRARHARQRVGVVPQFDNLDPD 92
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
F+++E ++ FG FGM ++ LL F L +++
Sbjct: 93 FTVRENLLVFGRYFGMSAQAAHALVKPLLEFAKLENKA 130
>sp|P26050|NODI_BRAJA Nod factor export ATP-binding protein I OS=Bradyrhizobium japonicum
(strain USDA 110) GN=nodI PE=3 SV=2
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+GLLG +G GK+T+ ++G + G+I VL +P + RVG +PQ L E
Sbjct: 36 FGLLGPNGAGKSTIARMLLGMISPDRGKITVLD-EPVPSRARAARVRVGVVPQFDNLEPE 94
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
F+++E ++ FG FGM I+ + LL F L S++
Sbjct: 95 FTVRENLLVFGRYFGMSARTIEAVVPSLLEFARLESKA 132
>sp|Q8GNH6|NODI_RHIML Nod factor export ATP-binding protein I OS=Rhizobium meliloti
GN=nodI PE=3 SV=1
Length = 335
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+GLLG +G GK+T+ I+G TG I VLG P + + +G +PQ L E
Sbjct: 65 FGLLGPNGAGKSTITRMILGMTTPATGVITVLG-VPVPSRARLARMGIGVVPQFDNLDSE 123
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
F+++E ++ FG F M T EI+ + LL F L
Sbjct: 124 FTVRENLLVFGRYFRMSTREIEAVIPSLLEFARL 157
>sp|Q5FA19|FBPC_NEIG1 Fe(3+) ions import ATP-binding protein FbpC OS=Neisseria
gonorrhoeae (strain ATCC 700825 / FA 1090) GN=fbpC PE=1
SV=1
Length = 352
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVP--GKRVGYMPQEIALYGE 80
++GASGCGKTTLL C+ G + ++GEI + G +K + +P +R+GY+ QE L+
Sbjct: 35 IIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGYLVQEGVLFPH 94
Query: 81 FSIKETMMY 89
++ + Y
Sbjct: 95 LTVYRNIAY 103
>sp|P23703|NODI_RHILO Nod factor export ATP-binding protein I OS=Rhizobium loti (strain
MAFF303099) GN=nodI PE=3 SV=2
Length = 340
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+GLLG +G GK+T+ ++G + G I VLG P + + + +G +PQ L E
Sbjct: 70 FGLLGPNGAGKSTIARMLLGMTCPDAGTITVLG-VPVPARARLARRGIGVVPQFDNLDQE 128
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
F+++E ++ FG FGM T + + + LL F L
Sbjct: 129 FTVRENLLVFGRYFGMSTRQSEAVIPSLLEFARL 162
>sp|Q1BWI2|NODI_BURCA Nod factor export ATP-binding protein I OS=Burkholderia cenocepacia
(strain AU 1054) GN=nodI PE=3 SV=1
Length = 304
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
YGLLG +G GKTT L ++G + G I L G+P + +RVG +PQ L +
Sbjct: 34 YGLLGPNGAGKTTTLKMLLGLAHPDAGTIS-LCGEPVPSRARHARQRVGVVPQFDNLDPD 92
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
F+++E ++ F FGM + LL F L +++
Sbjct: 93 FTVRENLLVFSRYFGMSAQAARALVAPLLEFAKLENKA 130
>sp|Q2SVP3|NODI_BURTA Nod factor export ATP-binding protein I OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=nodI PE=3 SV=2
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+GLLG +G GKTT L ++G + G I L G+P + +RVG +PQ L +
Sbjct: 34 FGLLGPNGAGKTTALKMLLGITHPDAGSIS-LCGEPVPSRARHARRRVGVVPQFDNLDPD 92
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
F+++E ++ F FG+ E + LL F L +++
Sbjct: 93 FTVRENLLVFARYFGLAAHEARALVPPLLEFAKLENKA 130
>sp|Q1M7W6|NODI_RHIL3 Nod factor export ATP-binding protein I OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=nodI PE=3 SV=2
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGK-PGTKGSGVPGKRVGYMPQEIALYG 79
+GLLG +G GK+T+ I+G + G+I VLG + PG + ++G + Q L
Sbjct: 41 FGLLGPNGAGKSTITRMILGMTSPSVGKITVLGAQEPGQ--VRLARAKIGIVSQFDNLDL 98
Query: 80 EFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
EF+++E ++ +G F M T EI+ + LL F L S++
Sbjct: 99 EFTVRENLLVYGRYFRMSTREIETVIPSLLEFARLESKA 137
>sp|P08720|NODI_RHILV Nod factor export ATP-binding protein I OS=Rhizobium leguminosarum
bv. viciae GN=nodI PE=3 SV=1
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGK-PGTKGSGVPGKRVGYMPQEIALYG 79
+GLLG +G GK+T+ I+G + G+I VLG + PG + ++G + Q L
Sbjct: 41 FGLLGPNGAGKSTITRMILGMTSPSVGKITVLGAQEPGQ--VRLARAKIGIVSQFDNLDL 98
Query: 80 EFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
EF+++E ++ +G F M T EI+ + LL F L S++
Sbjct: 99 EFTVRENLLVYGRYFRMSTREIETVIPSLLEFARLESKA 137
>sp|Q5PJL1|UGPC_SALPA sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42)
GN=ugpC PE=3 SV=1
Length = 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIW-----VLGGKPGTKGSGVPGKRVGYMPQEIAL 77
++G SGCGK+TLL + G R+ +G+IW V +P +G + + Q AL
Sbjct: 35 MVGPSGCGKSTLLRMVAGLERVTSGDIWIDRKRVTEMEPKDRG-------IAIVFQNYAL 87
Query: 78 YGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
Y S++E M + I GM I++R++ L+L
Sbjct: 88 YPHMSVEENMAWGLKIRGMSKAHIEERVREAARILEL 124
>sp|Q8Z245|UGPC_SALTI sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Salmonella typhi GN=ugpC PE=3 SV=1
Length = 356
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIW-----VLGGKPGTKGSGVPGKRVGYMPQEIAL 77
++G SGCGK+TLL + G R+ +G+IW V +P +G + + Q AL
Sbjct: 35 MVGPSGCGKSTLLRMVAGLERVTSGDIWIDRKRVTEMEPKDRG-------IAMVFQNYAL 87
Query: 78 YGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
Y S++E M + I GM I++R++ L+L
Sbjct: 88 YPHMSVEENMAWGLKIRGMSKAHIEERVREAARILEL 124
>sp|Q8ZLF4|UGPC_SALTY sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=ugpC PE=1 SV=1
Length = 356
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIW-----VLGGKPGTKGSGVPGKRVGYMPQEIAL 77
++G SGCGK+TLL + G R+ +G+IW V +P +G + + Q AL
Sbjct: 35 MVGPSGCGKSTLLRMVAGLERVTSGDIWIDRKRVTEMEPKDRG-------IAMVFQNYAL 87
Query: 78 YGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
Y S++E M + I GM I++R++ L+L
Sbjct: 88 YPHMSVEENMAWGLKIRGMSKAHIEERVREAARILEL 124
>sp|Q57IS3|UGPC_SALCH sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Salmonella choleraesuis (strain SC-B67) GN=ugpC PE=3
SV=1
Length = 356
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIW-----VLGGKPGTKGSGVPGKRVGYMPQEIAL 77
++G SGCGK+TLL + G R+ +G+IW V +P +G + + Q AL
Sbjct: 35 MVGPSGCGKSTLLRMVAGLERVTSGDIWIDRKRVTEMEPKDRG-------IAMVFQNYAL 87
Query: 78 YGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
Y S++E M + I GM I++R++ L+L
Sbjct: 88 YPHMSVEENMAWGLKIRGMSKAHIEERVREAARILEL 124
>sp|Q4QP85|FBPC_HAEI8 Fe(3+) ions import ATP-binding protein FbpC OS=Haemophilus
influenzae (strain 86-028NP) GN=fbpC PE=3 SV=1
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVP--GKRVGYMPQEIALYGE 80
LLGASGCGKTTLL I G NTGEIW+ + +P + +GY+ QE L+
Sbjct: 37 LLGASGCGKTTLLRAIAGFEHPNTGEIWLKERLIFGENFNLPTQQRHLGYVVQEGVLFPH 96
Query: 81 FSIKETMMY 89
++ + Y
Sbjct: 97 LNVYRNIAY 105
>sp|Q9Z3I3|NODI_BRASS Nod factor export ATP-binding protein I OS=Bradyrhizobium sp.
(strain SNU001) GN=nodI PE=3 SV=1
Length = 305
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKR-----VGYMPQEI 75
+GLLG +G GK+T+ R+ G IW GK VP + VG +PQ
Sbjct: 36 FGLLGPNGAGKSTI-------ARMLLGMIWPDRGKITVLDEPVPSRARARRGVGVVPQFD 88
Query: 76 ALYGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
L EF+++E ++ FG FGM I+ + LL F L S++
Sbjct: 89 NLEPEFTVRENLLVFGRYFGMSARTIEAVVPSLLEFARLESKA 131
>sp|Q8K442|ABC8A_MOUSE ATP-binding cassette sub-family A member 8-A OS=Mus musculus
GN=Abca8a PE=2 SV=2
Length = 1620
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 16 KKKKKYGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEI 75
+K + GLLG +G GK+T + I G + + G++ + G G PG +GY PQE
Sbjct: 1313 RKGEVVGLLGHNGAGKSTSIKMITGETKPSAGQVLLKGSSTGD----TPG-FLGYCPQEN 1367
Query: 76 ALYGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQ 117
AL+ +++E + F I GM + + ++ L + L L Q
Sbjct: 1368 ALWLNLTVREHLEIFAAIKGMRKSDANVAIERLADALKLQDQ 1409
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 22 GLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPG--TKGSGVPGKRVGYMPQEIALYG 79
+LG SG GK+TLL+ + G G + + K T + K G PQ +
Sbjct: 511 AILGHSGAGKSTLLNVLSGLCVPTKGWVTIHNNKLSEMTDLENI-SKLTGVCPQCNVQFD 569
Query: 80 EFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLP-SQSRLVKNL 124
+++E + F I G++ E+D+ +Q +L LD+ +Q+ LV+NL
Sbjct: 570 FLTVRENLRLFAKIKGIQAHEVDNEVQRVLLELDMKNTQNILVQNL 615
>sp|Q3JSQ0|NODI_BURP1 Nod factor export ATP-binding protein I OS=Burkholderia
pseudomallei (strain 1710b) GN=nodI PE=3 SV=2
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+GLLG +G GKTT L ++G + G I L G+P + +RVG +PQ L +
Sbjct: 34 FGLLGPNGAGKTTTLKMLLGITHPDAGSIS-LCGEPVPSRARHARQRVGVVPQFDNLDPD 92
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
F+++E ++ F FG+ + LL F L S++
Sbjct: 93 FTVRENLLVFARYFGLTAHAARALVPPLLEFAKLESKA 130
>sp|Q62K72|NODI_BURMA Nod factor export ATP-binding protein I OS=Burkholderia mallei
(strain ATCC 23344) GN=nodI PE=3 SV=2
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+GLLG +G GKTT L ++G + G I L G+P + +RVG +PQ L +
Sbjct: 34 FGLLGPNGAGKTTTLKMLLGITHPDAGSIS-LCGEPVPSRARHARQRVGVVPQFDNLDPD 92
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
F+++E ++ F FG+ + LL F L S++
Sbjct: 93 FTVRENLLVFARYFGLTAHAARALVPPLLEFAKLESKA 130
>sp|Q63TX3|NODI_BURPS Nod factor export ATP-binding protein I OS=Burkholderia
pseudomallei (strain K96243) GN=nodI PE=3 SV=2
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+GLLG +G GKTT L ++G + G I L G+P + +RVG +PQ L +
Sbjct: 34 FGLLGPNGAGKTTTLKMLLGITHPDAGSIS-LCGEPVPSRARHARQRVGVVPQFDNLDPD 92
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
F+++E ++ F FG+ + LL F L S++
Sbjct: 93 FTVRENLLVFARYFGLTAHAARALVPPLLEFAKLESKA 130
>sp|P0A9U2|YBHF_SHIFL Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Shigella flexneri GN=ybhF PE=3 SV=1
Length = 578
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 16 KKKKKYGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEI 75
K+ + +GLLG +G GK+T + G +G+ VLG + SG + +GYM Q+
Sbjct: 353 KRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDL-KESSGKARQHLGYMAQKF 411
Query: 76 ALYGEFSIKETMMYFGWIFGM 96
+LYG ++++ + +F ++G+
Sbjct: 412 SLYGNLTVEQNLRFFSGVYGL 432
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 22 GLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGEF 81
GL+G G GKTTL+ + G + ++G V+G P K G +GYMPQ+ LY +
Sbjct: 37 GLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDP-IKNDGALHAVLGYMPQKFGLYEDL 95
Query: 82 SIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL-PSQSRLVKNL 124
++ E + + + + LL F L P RL L
Sbjct: 96 TVMENLNLYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKL 139
>sp|P0A9U1|YBHF_ECOLI Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Escherichia coli (strain K12) GN=ybhF PE=1 SV=1
Length = 578
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 16 KKKKKYGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEI 75
K+ + +GLLG +G GK+T + G +G+ VLG + SG + +GYM Q+
Sbjct: 353 KRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDL-KESSGKARQHLGYMAQKF 411
Query: 76 ALYGEFSIKETMMYFGWIFGM 96
+LYG ++++ + +F ++G+
Sbjct: 412 SLYGNLTVEQNLRFFSGVYGL 432
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 22 GLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGEF 81
GL+G G GKTTL+ + G + ++G V+G P K G +GYMPQ+ LY +
Sbjct: 37 GLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDP-IKNDGALHAVLGYMPQKFGLYEDL 95
Query: 82 SIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL-PSQSRLVKNL 124
++ E + + + + LL F L P RL L
Sbjct: 96 TVMENLNLYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKL 139
>sp|Q1R5H8|UGPC_ECOUT sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Escherichia coli (strain UTI89 / UPEC) GN=ugpC PE=3
SV=2
Length = 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIW-----VLGGKPGTKGSGVPGKRVGYMPQEIAL 77
++G SGCGK+TLL + G R+ TG+IW V +P +G + + Q AL
Sbjct: 35 MVGPSGCGKSTLLRMVAGLERVTTGDIWIDRKRVTEMEPKDRG-------IAMVFQNYAL 87
Query: 78 YGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
Y S++E M + I GM +I +R++ L+L
Sbjct: 88 YPHMSVEENMAWGLKIRGMGKQQIAERVKEAARILEL 124
>sp|A1AGY1|UGPC_ECOK1 sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Escherichia coli O1:K1 / APEC GN=ugpC PE=3 SV=1
Length = 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIW-----VLGGKPGTKGSGVPGKRVGYMPQEIAL 77
++G SGCGK+TLL + G R+ TG+IW V +P +G + + Q AL
Sbjct: 35 MVGPSGCGKSTLLRMVAGLERVTTGDIWIDRKRVTEMEPKDRG-------IAMVFQNYAL 87
Query: 78 YGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
Y S++E M + I GM +I +R++ L+L
Sbjct: 88 YPHMSVEENMAWGLKIRGMGKQQIAERVKEAARILEL 124
>sp|Q609Q1|CYSA_METCA Sulfate/thiosulfate import ATP-binding protein CysA
OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB
11132 / Bath) GN=cysA PE=3 SV=1
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 22 GLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGEF 81
LLG SGCGKTTLL I G ++G+I + G T V +RVG++ Q AL+
Sbjct: 32 ALLGPSGCGKTTLLRIIAGLEAADSGQILLHG--EDTTHRHVRERRVGFVFQHYALFRHM 89
Query: 82 SIKETMMYFGWIF---GMETP--EIDDRLQFLLNFLDL 114
S+ E + FG G P EI R+Q LL + L
Sbjct: 90 SVFENIA-FGLRVRPRGQRPPEAEIRRRVQELLELVQL 126
>sp|Q0TC10|UGPC_ECOL5 sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=ugpC PE=3 SV=1
Length = 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIW-----VLGGKPGTKGSGVPGKRVGYMPQEIAL 77
++G SGCGK+TLL + G R+ TG+IW V +P +G + + Q AL
Sbjct: 35 MVGPSGCGKSTLLRMVAGLERVTTGDIWIDRKRVTEMEPKDRG-------IAMVFQNYAL 87
Query: 78 YGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
Y S++E M + I GM +I +R++ L+L
Sbjct: 88 YPHMSVEENMAWGLKIRGMGKQQIAERVKEAARILEL 124
>sp|Q8FCQ2|UGPC_ECOL6 sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=ugpC PE=3 SV=2
Length = 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIW-----VLGGKPGTKGSGVPGKRVGYMPQEIAL 77
++G SGCGK+TLL + G R+ TG+IW V +P +G + + Q AL
Sbjct: 35 MVGPSGCGKSTLLRMVAGLERVTTGDIWIDRKRVTEMEPKDRG-------IAMVFQNYAL 87
Query: 78 YGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
Y S++E M + I GM +I +R++ L+L
Sbjct: 88 YPHMSVEENMAWGLKIRGMGKQQIAERVKEAARILEL 124
>sp|Q8XXY9|NODI_RALSO Nod factor export ATP-binding protein I OS=Ralstonia solanacearum
(strain GMI1000) GN=nodI PE=3 SV=1
Length = 321
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 16 KKKKKYGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGK------RVG 69
++ + +GLLG +G GKTT L ++G + G + + G +PG RVG
Sbjct: 40 RRGQCFGLLGPNGAGKTTTLRMLLGMTMPDAGTLQLCG-------ETIPGHAHRARMRVG 92
Query: 70 YMPQEIALYGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
+PQ L +F++ E + FG FG+ I R+ LL F L
Sbjct: 93 VVPQFDNLDPDFTVSENLQIFGRYFGLPAATIRKRMPGLLEFARL 137
>sp|Q2J2E9|UGPC_RHOP2 sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Rhodopseudomonas palustris (strain HaA2) GN=ugpC PE=3
SV=1
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKR-VGYMPQEIALYGEF 81
L+G SGCGK+TLL + G + GEI + GG+ + P R + + Q ALY
Sbjct: 35 LVGPSGCGKSTLLRMVAGLETITAGEIDI-GGRIVNQIE--PADRDIAMVFQNYALYPHM 91
Query: 82 SIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
S+ M Y GM PEID R+Q L++
Sbjct: 92 SVYNNMAYGLRNRGMPKPEIDARVQEAARILEI 124
>sp|Q6D2F6|FBPC2_ERWCT Fe(3+) ions import ATP-binding protein FbpC 2 OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=fbpC2 PE=3 SV=1
Length = 346
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 16 KKKKKYGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPG--KRVGYMPQ 73
+ ++ ++G SG GKTTLL I G +TG I + G G VP +R+GY+PQ
Sbjct: 25 ENSRRTAIVGPSGSGKTTLLRLIAGFETPDTGVITLNGQTLCDNGFSVPAHQRRIGYVPQ 84
Query: 74 EIALYGEFSIKETMMYFGWIFGM--ETPEIDDRLQFLLNFLDLPSQ 117
+ AL+ I + + FG+ E R+ L+ + LP+
Sbjct: 85 DGALFPHLCIADNIA-----FGLKGSKAEKQKRVDELMALVSLPTH 125
>sp|P56344|CYSA_CHLVU Probable sulfate/thiosulfate import ATP-binding protein CysA
OS=Chlorella vulgaris GN=cysA PE=3 SV=1
Length = 236
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 22 GLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGEF 81
GLLG SG GK+TLL + G + ++G IW L G+ T+ + + +G++ Q AL+
Sbjct: 32 GLLGPSGSGKSTLLRVLAGLEKPDSGRIW-LEGQDATQMK-LQDREIGFVFQNYALFPHL 89
Query: 82 SIKETMMYFGWIFGMETPEIDDRL 105
++ E + FG+E +ID L
Sbjct: 90 TVSENVA-----FGLEIQKIDSLL 108
>sp|P50332|NODI_RHIGA Nod factor export ATP-binding protein I OS=Rhizobium galegae
GN=nodI PE=3 SV=1
Length = 347
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGK------RVGYMPQE 74
+GLLG +G GK+T+ ++G + G+I VLG VPGK +G + Q
Sbjct: 77 FGLLGPNGAGKSTITRMLLGMATPSAGKISVLGLP-------VPGKARLARASIGVVSQF 129
Query: 75 IALYGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQS 118
L EF+++E ++ FG F M T I+ + LL F L +++
Sbjct: 130 DNLDMEFTVRENLLVFGRYFQMSTRAIEKLIPSLLEFAQLEAKA 173
>sp|Q4W575|FBPC_NEIMB Fe(3+) ions import ATP-binding protein FbpC OS=Neisseria
meningitidis serogroup B (strain MC58) GN=fbpC PE=3 SV=1
Length = 352
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVP--GKRVGYMPQEIALYGE 80
++GASGCGKTTLL C+ G + + GEI + G +K + +P +R+GY+ QE L+
Sbjct: 35 IVGASGCGKTTLLRCLAGFEQPDFGEISLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPH 94
Query: 81 FSIKETMMY 89
++ Y
Sbjct: 95 LTVYRNTAY 103
>sp|Q9JVH1|FBPC_NEIMA Fe(3+) ions import ATP-binding protein FbpC OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=fbpC PE=3 SV=1
Length = 352
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVP--GKRVGYMPQEIALYGE 80
++GASGCGKTTLL C+ G + + GEI + G +K + +P +R+GY+ QE L+
Sbjct: 35 IVGASGCGKTTLLRCLAGFEQPDFGEISLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPH 94
Query: 81 FSIKETMMY 89
++ Y
Sbjct: 95 LTVYRNTAY 103
>sp|Q8IUA7|ABCA9_HUMAN ATP-binding cassette sub-family A member 9 OS=Homo sapiens GN=ABCA9
PE=1 SV=1
Length = 1624
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 2 KTNTNTKKKKKKKK-------KKKKKYGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGG 54
K N +K+KKK KK + GLLG +G GK+T + I G + G++ + G
Sbjct: 1296 KKNCFSKRKKKIATRNVSFCVKKGEVIGLLGHNGAGKSTTIKMITGDTKPTAGQVILKG- 1354
Query: 55 KPGTKGSGVPGKRVGYMPQEIALYGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
G G P +GY PQE AL+ ++++ + + + G+ + + L++ L L
Sbjct: 1355 ----SGGGEPLGFLGYCPQENALWPNLTVRQHLEVYAAVKGLRKGDAMIAITRLVDALKL 1410
Query: 115 PSQ 117
Q
Sbjct: 1411 QDQ 1413
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 22 GLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVP--GKRVGYMPQEIALYG 79
LLG SG GKTTLL+ + G +G + V ++ + + K G+ PQ +G
Sbjct: 514 ALLGHSGAGKTTLLNILSGLSVPTSGSVTVYN-HTLSRMADIENISKFTGFCPQSNVQFG 572
Query: 80 EFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPS-QSRLVKNL 124
++KE + F I G+ E++ +Q ++ L++ + Q L +NL
Sbjct: 573 FLTVKENLRLFAKIKGILPHEVEKEVQRVVQELEMENIQDILAQNL 618
>sp|Q8K440|ABC8B_MOUSE ATP-binding cassette sub-family A member 8-B OS=Mus musculus
GN=Abca8b PE=2 SV=2
Length = 1620
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 16 KKKKKYGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEI 75
+K + GLLG +G GK+T L I G ++ G++ + G + G PG +GY PQE
Sbjct: 1312 RKGEILGLLGHNGAGKSTSLKMISGDTKVTAGQVLLKGSREGD----TPG-FLGYCPQEN 1366
Query: 76 ALYGEFSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPSQ 117
AL+ ++KE + F + G+ + L + L L Q
Sbjct: 1367 ALWPNLTVKEHLEIFAAVRGLRKSHAAVAITRLADALKLQDQ 1408
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 22 GLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRV-GYMPQEIALYGE 80
+LG SG GK+TLL+ + G G + + R+ G PQ +
Sbjct: 512 AVLGHSGAGKSTLLNILSGLSVPTKGSVTIYNNNLSEMADLENILRIAGVCPQANVQFDF 571
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPS-QSRLVKNL 124
+++E + F I G+ +++ +Q +L L++ + Q+ L +NL
Sbjct: 572 LTVRENLRLFAKIRGIPPQDVEKEVQRVLLELEMKNIQNILAQNL 616
>sp|Q21BF6|MODC_RHOPB Molybdenum import ATP-binding protein ModC OS=Rhodopseudomonas
palustris (strain BisB18) GN=modC PE=3 SV=1
Length = 381
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 22 GLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGV--PGKR-VGYMPQEIALY 78
GL G SGCGK+T+L CI G ++L G + + G S P +R +GY+ QE +L+
Sbjct: 34 GLFGPSGCGKSTVLRCIAGLQQL-PGSTFAIDGDVWQDASQFRQPHQRPIGYVFQEASLF 92
Query: 79 GEFSIKETMMY 89
S+K ++Y
Sbjct: 93 AHLSVKANLLY 103
>sp|P19844|NOSF_PSEST Copper transport ATP-binding protein NosF OS=Pseudomonas stutzeri
GN=nosF PE=3 SV=1
Length = 308
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 22 GLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGEF 81
GL G +G GKTT + I+G + G++ VLG P +++GY+P+ + Y +
Sbjct: 33 GLFGHNGAGKTTSMKLILGLLSPSEGQVKVLGRAPNDPQVR---RQLGYLPENVTFYPQL 89
Query: 82 SIKETMMYFGWIFGMETPEIDDRLQ 106
S +ET+ +F + G ++D+ L+
Sbjct: 90 SGRETLRHFARLKGAALTQVDELLE 114
>sp|Q08381|MODC_RHOCA Molybdenum import ATP-binding protein ModC OS=Rhodobacter
capsulatus GN=modC PE=3 SV=1
Length = 363
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 22 GLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGV--PGKR-VGYMPQEIALY 78
L G SGCGKTT+L C+ G RL G + V+ G +G + P +R VGY+ QE +L+
Sbjct: 28 ALFGPSGCGKTTVLRCMAGLTRLPGGHL-VVNGVTWQEGRQITPPHRRAVGYVFQEASLF 86
Query: 79 GEFSIKETMMY 89
S++E ++Y
Sbjct: 87 THLSVRENLVY 97
>sp|Q58429|Y1023_METJA Uncharacterized ABC transporter ATP-binding protein MJ1023
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1023
PE=3 SV=1
Length = 262
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 21 YGLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGE 80
+GLLG +G GKTT L + G TG + V G ++GY+P+E LY +
Sbjct: 33 FGLLGHNGAGKTTTLRILAGIIEEYTGYVEVNG-------------KIGYLPEERGLYRD 79
Query: 81 FSIKETMMYFGWIFGMETPEIDDRLQFLLNFLDLPS 116
+ + + +FG + GM+ EI + + LN L + +
Sbjct: 80 EKVVDVLKFFGELAGMKKEEIAKSIDYWLNKLKISN 115
>sp|Q7NIW1|CYSA_GLOVI Sulfate/thiosulfate import ATP-binding protein CysA OS=Gloeobacter
violaceus (strain PCC 7421) GN=cysA PE=3 SV=1
Length = 344
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 22 GLLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGEF 81
LLG SGCGK+TLL I G ++G+IW L G+ T+ + + +G++ Q AL+
Sbjct: 32 ALLGPSGCGKSTLLRLIAGLELPDSGQIW-LEGQDATR-QRLQERNIGFVFQHYALFKHL 89
Query: 82 SIKETMMYFGWIFGME---TP--EIDDRLQFLLNFLDL 114
++ + + FG+E TP +I R++ LL + L
Sbjct: 90 TVAQNIA-----FGLEVRKTPKAQIKARVEELLELVQL 122
>sp|Q13ER6|UGPC_RHOPS sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Rhodopseudomonas palustris (strain BisB5) GN=ugpC
PE=3 SV=1
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 23 LLGASGCGKTTLLSCIVGRRRLNTGEIWVLGGKPGTKGSGVPGKR-VGYMPQEIALYGEF 81
L+G SGCGK+TLL + G + GEI + GG+ P R + + Q ALY
Sbjct: 35 LVGPSGCGKSTLLRMVAGLETITAGEIDI-GGR--VVNDVEPADRDIAMVFQNYALYPHM 91
Query: 82 SIKETMMYFGWIFGMETPEIDDRLQFLLNFLDL 114
S+ M Y GM PEI+ R+Q L++
Sbjct: 92 SVYNNMAYGLRNRGMAKPEIEARVQEAARILEI 124
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,543,065
Number of Sequences: 539616
Number of extensions: 2329775
Number of successful extensions: 26251
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 710
Number of HSP's that attempted gapping in prelim test: 23846
Number of HSP's gapped (non-prelim): 2674
length of query: 125
length of database: 191,569,459
effective HSP length: 92
effective length of query: 33
effective length of database: 141,924,787
effective search space: 4683517971
effective search space used: 4683517971
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)