BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3400
(417 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P16241|CF1A_DROME POU domain protein CF1A OS=Drosophila melanogaster GN=vvl PE=2 SV=5
Length = 427
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 276/452 (61%), Positives = 297/452 (65%), Gaps = 60/452 (13%)
Query: 1 MATTTYLPASSVVASDLDGMNIVNTSIGYPSPRSVPDSGELKYQHHHHHHHHH------- 53
MA T+Y+ S DLD M + SPRS D+GE+KY HHHHHH
Sbjct: 1 MAATSYMTPPS---GDLD-MALGGGGYHTSSPRSAADAGEMKYMQHHHHHHAAAAAAAHH 56
Query: 54 QVPSSPSPNGHPVSLSAAHNP------WVSLQPGAGADPWSSSMPGIHNHHHPHHHQQSP 107
Q+PSSPSPNG W +L P DPW M H HH P +
Sbjct: 57 QLPSSPSPNGQGNGGGLGLGSGSGLGSWSALHP----DPW---MQTHHTHHLPAAAAVAS 109
Query: 108 VDIKPPPDMHRTSHQ---HGGMGSPHS-WHTPVVSSHYIPSGNSGAASPLQHHSAYHVNV 163
+M S Q GM SPH+ WH P + HY P+G SPLQ+H A
Sbjct: 110 AADTVKQEMSHLSQQTRIQQGMASPHAAWHAPH-AGHYAPTG----GSPLQYHHA----- 159
Query: 164 MNGMLHHH---------QPSPQLHHSLRDI--QAHSPSYSQSQHPDAPSGSEEDAPTSDD 212
MNGMLHH Q LHH+LR Q H + DA SG EED PTSDD
Sbjct: 160 MNGMLHHPAHAVAAAHHQSVAPLHHTLRGESPQLHIHHHMGGGDRDAISGGEEDTPTSDD 219
Query: 213 LEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQ 272
LEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQ
Sbjct: 220 LEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQ 279
Query: 273 KWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKPSAQEITTLAD 332
KWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEV+VKGALE HFHKQPKPSAQEIT+LAD
Sbjct: 280 KWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLAD 339
Query: 333 SLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGP-QDGMMEGQLGMHGYH-HPDLHGSPMGP 390
SLQLEKEVVRVWFCNRRQKEKRMTPPNTLGG DGM G + GYH H D+HGSPMG
Sbjct: 340 SLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGDMMDGMPPGHMHHGGYHPHHDMHGSPMG- 398
Query: 391 HSHSHSHSPPMLSPSHQSMQS-----HQLTAH 417
+HSHSHSPPMLSP Q+MQS HQL AH
Sbjct: 399 -THSHSHSPPMLSP--QNMQSSAVAAHQLAAH 427
>sp|Q17237|SGF3_BOMMO Silk gland factor 3 OS=Bombyx mori GN=SGF3 PE=2 SV=1
Length = 351
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 249/422 (59%), Positives = 264/422 (62%), Gaps = 76/422 (18%)
Query: 1 MATTTYLPASSVVASDLDGMNIVNTSIGY--PSPRSVPDSGELKYQHHHHHHHHHQVPSS 58
MA TTY+PA M + N GY SPRS + ++KYQH H S
Sbjct: 1 MAATTYMPAE---------MELGNIG-GYHAASPRSA-EPADMKYQHPLHSG------GS 43
Query: 59 PSPNGHPVSLSAAHNPWVSLQPGAGADPWSSSMPGIHNHHHPHHHQQSPVDIKPPPDMHR 118
PSP G PV NPW SL P ADPW+ HH D+KPPP H
Sbjct: 44 PSP-GAPV----IGNPWTSLPP---ADPWAMHQ---------HHAHAHQPDVKPPPAPHD 86
Query: 119 TSH-QHGGMGSPHSWHTPVVSSHYIPSGNSGAASPLQHHSAYHVNVMNGMLHH-HQPSPQ 176
H QH H WH PVVS HY GAA P N + P
Sbjct: 87 HRHLQHAA----HGWHAPVVSPHY------GAARPSHCMEDTQCPCTNTICSETSSPRDP 136
Query: 177 LHHSLRDIQAHSPSYSQSQHPDAPSGSEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGL 236
LHH + D P EED PTSDDLEAFAKQFKQRRIKLGFTQADVGL
Sbjct: 137 LHH-------------HAMERDQP---EEDTPTSDDLEAFAKQFKQRRIKLGFTQADVGL 180
Query: 237 ALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGR 296
ALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGR
Sbjct: 181 ALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGR 240
Query: 297 KRKKRTSIEVTVKGALETHFHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMT 356
KRKKRTSIEV+VKGALE HFHKQPKPSAQEIT+LADSLQLEKEVVRVWFCNRRQKEKRMT
Sbjct: 241 KRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMT 300
Query: 357 PPNTLGGPQDGMMEGQLGMHGYHHPDLHGSPMGPHSHSHSHSPPMLSPSHQSMQ-SHQLT 415
PPNTLGG MMEG +G Y H D+HGSP+ HSPP LSP H Q +H L
Sbjct: 301 PPNTLGGE---MMEG-MGHAHYGHGDVHGSPL-------QHSPPGLSPQHGLPQGAHTLA 349
Query: 416 AH 417
AH
Sbjct: 350 AH 351
>sp|Q561L5|P3F1B_XENLA POU domain, class 3, transcription factor 1-B OS=Xenopus laevis
GN=pou3f1-b PE=2 SV=1
Length = 375
Score = 314 bits (804), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 186/305 (60%), Positives = 211/305 (69%), Gaps = 21/305 (6%)
Query: 63 GHPVSLSAAHNPWVSLQPGAGADPWSSSMPGIHNHHHPHHHQQSPVDIKPPPDMHRTSHQ 122
GHP+SL+ H+ W+ P +D S S G H Q S D+ HR+
Sbjct: 53 GHPMSLT--HHQWL---PNPTSDWGSGSHLGAQAEHGKSGVQSSREDLSSSFHHHRSHLV 107
Query: 123 HGGMGSPHSWHTPVVSSHYIPSGNSGAAS--PLQHHSAYHVNVMNGMLHHHQPSPQLHHS 180
H S H+W H++PS + G+ S PL + + + N +NGML S LHHS
Sbjct: 108 HQQTPSSHAWAQS--GGHHLPSMSPGSNSHQPLIYSQSSYTN-LNGMLGPQASS--LHHS 162
Query: 181 LRDIQAHSPSYSQSQHPDAP--------SGSEEDAPTSDDLEAFAKQFKQRRIKLGFTQA 232
+RD P + H ++P S+EDAP+SDDLE FAKQFKQRRIKLGFTQA
Sbjct: 163 MRDPLHDDPGVHDT-HVESPPQHLGHHQDHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQA 221
Query: 233 DVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIA 292
DVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL KWLEE DSTTGSPT++DKIA
Sbjct: 222 DVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSTTGSPTNLDKIA 281
Query: 293 AQGRKRKKRTSIEVTVKGALETHFHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKE 352
AQGRKRKKRTSIEV VKGALE HF K PKPSA EIT+LADSLQLEKEVVRVWFCNRRQKE
Sbjct: 282 AQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQLEKEVVRVWFCNRRQKE 341
Query: 353 KRMTP 357
KRMTP
Sbjct: 342 KRMTP 346
>sp|P56224|P3F3A_DANRE POU domain, class 3, transcription factor 3-A OS=Danio rerio
GN=pou3f3a PE=2 SV=2
Length = 438
Score = 314 bits (804), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 148/164 (90%), Positives = 154/164 (93%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+ED PTSDDLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK
Sbjct: 240 SDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 299
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEV+VKGALE+HF K PKP
Sbjct: 300 NMCKLKPLLNKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKP 359
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGPQD 366
SAQEIT+LAD+LQLEKEVVRVWFCNRRQKEKRMTPP P+D
Sbjct: 360 SAQEITSLADNLQLEKEVVRVWFCNRRQKEKRMTPPGVPQTPED 403
>sp|Q4QQQ7|PO3F1_XENTR POU domain, class 3, transcription factor 1 OS=Xenopus tropicalis
GN=pou3f1 PE=2 SV=1
Length = 375
Score = 313 bits (802), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/307 (60%), Positives = 209/307 (68%), Gaps = 25/307 (8%)
Query: 63 GHPVSLSAAHNPWVSLQPGAGADPWSSSMPGIHNHHHPHHHQQSPVDIKPPPDMHRTSHQ 122
GHP+SL+ H+ W+ P +D S S G H Q S D+ HR+
Sbjct: 53 GHPMSLT--HHQWL---PNPASDWGSGSHLGAQAEHGKSGVQSSREDLSSSFHHHRSHLV 107
Query: 123 HGGMGSPHSWHTPVVSSHYIPSGNSGAAS--PLQHHSAYHVNVMNGMLHHHQPSPQLHHS 180
H S H+W H++P + G+ S PL + + + N +NGML S LHHS
Sbjct: 108 HQQTPSSHAWAQS--GGHHLPPMSPGSNSHQPLIYSQSSYTN-LNGMLGPQASS--LHHS 162
Query: 181 LRD----------IQAHSPSYSQSQHPDAPSGSEEDAPTSDDLEAFAKQFKQRRIKLGFT 230
+RD SP S H D S+EDAP+SDDLE FAKQFKQRRIKLGFT
Sbjct: 163 MRDPLHDDPGVLDTHVESPPQHLSHHQDH---SDEDAPSSDDLEQFAKQFKQRRIKLGFT 219
Query: 231 QADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDK 290
QADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL KWLEE DSTTGSPT++DK
Sbjct: 220 QADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSTTGSPTNLDK 279
Query: 291 IAAQGRKRKKRTSIEVTVKGALETHFHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQ 350
IAAQGRKRKKRTSIEV VKGALE HF K PKPSA EIT+LADSLQLEKEVVRVWFCNRRQ
Sbjct: 280 IAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQLEKEVVRVWFCNRRQ 339
Query: 351 KEKRMTP 357
KEKRMTP
Sbjct: 340 KEKRMTP 346
>sp|P20264|PO3F3_HUMAN POU domain, class 3, transcription factor 3 OS=Homo sapiens
GN=POU3F3 PE=2 SV=2
Length = 500
Score = 311 bits (797), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 146/157 (92%), Positives = 150/157 (95%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+ED PTSDDLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK
Sbjct: 312 SDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 371
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEEADS+TGSPTSIDKIAAQGRKRKKRTSIEV+VKGALE+HF K PKP
Sbjct: 372 NMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKP 431
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPN 359
SAQEIT LADSLQLEKEVVRVWFCNRRQKEKRMTPP
Sbjct: 432 SAQEITNLADSLQLEKEVVRVWFCNRRQKEKRMTPPG 468
>sp|Q63262|PO3F3_RAT POU domain, class 3, transcription factor 3 OS=Rattus norvegicus
GN=Pou3f3 PE=1 SV=2
Length = 497
Score = 311 bits (797), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 146/157 (92%), Positives = 150/157 (95%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+ED PTSDDLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK
Sbjct: 309 SDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 368
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEEADS+TGSPTSIDKIAAQGRKRKKRTSIEV+VKGALE+HF K PKP
Sbjct: 369 NMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKP 428
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPN 359
SAQEIT LADSLQLEKEVVRVWFCNRRQKEKRMTPP
Sbjct: 429 SAQEITNLADSLQLEKEVVRVWFCNRRQKEKRMTPPG 465
>sp|P31361|PO3F3_MOUSE POU domain, class 3, transcription factor 3 OS=Mus musculus
GN=Pou3f3 PE=2 SV=2
Length = 497
Score = 311 bits (797), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 146/157 (92%), Positives = 150/157 (95%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+ED PTSDDLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK
Sbjct: 309 SDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 368
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEEADS+TGSPTSIDKIAAQGRKRKKRTSIEV+VKGALE+HF K PKP
Sbjct: 369 NMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKP 428
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPN 359
SAQEIT LADSLQLEKEVVRVWFCNRRQKEKRMTPP
Sbjct: 429 SAQEITNLADSLQLEKEVVRVWFCNRRQKEKRMTPPG 465
>sp|P79745|P3F3B_DANRE POU domain, class 3, transcription factor 3-B OS=Danio rerio
GN=pou3f3b PE=1 SV=1
Length = 443
Score = 311 bits (796), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 147/164 (89%), Positives = 154/164 (93%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+ED PTSDDLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK
Sbjct: 236 SDEDTPTSDDLEHFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 295
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEEADS+TGSPTSIDKIAAQGRKRKKRTSIEV+VKGALE+HF K PKP
Sbjct: 296 NMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKP 355
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGPQD 366
SAQEIT+LAD+LQLEKEVVRVWFCNRRQKEKRMTPP P+D
Sbjct: 356 SAQEITSLADNLQLEKEVVRVWFCNRRQKEKRMTPPGVPQTPED 399
>sp|P31360|PO3F2_MOUSE POU domain, class 3, transcription factor 2 OS=Mus musculus
GN=Pou3f2 PE=2 SV=1
Length = 445
Score = 310 bits (795), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/280 (61%), Positives = 193/280 (68%), Gaps = 29/280 (10%)
Query: 111 KPPPDMHRTSHQHGGMGSPHSWHTPVVSSHYIPSGNSGAASPLQHHSAYHVNVMNGMLHH 170
+PP +H ++ H G P +W + ++H PS + L ++ VN M G
Sbjct: 152 RPPHLVHHAANHHPG---PGAWRSAAAAAHLPPSMGASNGGLLYSQPSFTVNGMLGA--G 206
Query: 171 HQPSPQLHHSLRDIQAHSPSYSQSQHPDAPSG-----------------------SEEDA 207
QP+ HH LRD HP + S+ED
Sbjct: 207 GQPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQQPPPPPPPQGPPGHPGAHHDPHSDEDT 266
Query: 208 PTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKL 267
PTSDDLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKL
Sbjct: 267 PTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKL 326
Query: 268 KPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKPSAQEI 327
KPLL KWLEEADS++GSPTSIDKIAAQGRKRKKRTSIEV+VKGALE+HF K PKPSAQEI
Sbjct: 327 KPLLNKWLEEADSSSGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEI 386
Query: 328 TTLADSLQLEKEVVRVWFCNRRQKEKRMTPP-NTLGGPQD 366
T+LADSLQLEKEVVRVWFCNRRQKEKRMTPP TL G +D
Sbjct: 387 TSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGGTLPGAED 426
>sp|P20265|PO3F2_HUMAN POU domain, class 3, transcription factor 2 OS=Homo sapiens
GN=POU3F2 PE=1 SV=4
Length = 443
Score = 310 bits (795), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/280 (61%), Positives = 193/280 (68%), Gaps = 29/280 (10%)
Query: 111 KPPPDMHRTSHQHGGMGSPHSWHTPVVSSHYIPSGNSGAASPLQHHSAYHVNVMNGMLHH 170
+PP +H ++ H G P +W + ++H PS + L ++ VN M G
Sbjct: 150 RPPHLVHHAANHHPG---PGAWRSAAAAAHLPPSMGASNGGLLYSQPSFTVNGMLGA--G 204
Query: 171 HQPSPQLHHSLRDIQAHSPSYSQSQHPDAPSG-----------------------SEEDA 207
QP+ HH LRD HP + S+ED
Sbjct: 205 GQPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQQPPPPPPPQGPPGHPGAHHDPHSDEDT 264
Query: 208 PTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKL 267
PTSDDLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKL
Sbjct: 265 PTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKL 324
Query: 268 KPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKPSAQEI 327
KPLL KWLEEADS++GSPTSIDKIAAQGRKRKKRTSIEV+VKGALE+HF K PKPSAQEI
Sbjct: 325 KPLLNKWLEEADSSSGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEI 384
Query: 328 TTLADSLQLEKEVVRVWFCNRRQKEKRMTPP-NTLGGPQD 366
T+LADSLQLEKEVVRVWFCNRRQKEKRMTPP TL G +D
Sbjct: 385 TSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGGTLPGAED 424
>sp|P70030|P3F2B_XENLA POU domain, class 3, transcription factor 2-B OS=Xenopus laevis
GN=pou3f2-b PE=2 SV=1
Length = 385
Score = 310 bits (793), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 210/335 (62%), Gaps = 46/335 (13%)
Query: 62 NGHPVSLSAAHNPWVSLQPGAGADPWSSSMPG--------------IHNHHHPHHHQQSP 107
NGHP LS AH +L G GA PW++S G +H H ++P
Sbjct: 48 NGHP--LSHAHQWITALSHGDGA-PWATSPLGQQDIKPTVQSSRDELHGSGTLQHQSRAP 104
Query: 108 VDIKPPPDMHRTSHQHGGMGSPHSWHTPVVSSHYIPSGNSGAASPLQHHSAYHVNVMNGM 167
+ P HG P +W + S+H +S L ++ VN GM
Sbjct: 105 HLVHPA---------HGNHHGPGAWRS-TGSTHLSSMASSNGQGLLYSQPSFTVN---GM 151
Query: 168 LHHHQPSPQLHHSLRDIQAHSPSYSQSQHPDAPSG---------------SEEDAPTSDD 212
++ HH LRD Q P S+ED PTSDD
Sbjct: 152 INPGSGQGMHHHGLRDSHDDHHGDHGHQQPSQTQQQQQQHSQLQGGHHDHSDEDTPTSDD 211
Query: 213 LEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQ 272
LE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL
Sbjct: 212 LEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLN 271
Query: 273 KWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKPSAQEITTLAD 332
KWLEEADS++GSPTSIDKIAAQGRKRKKRTSIEV+VKGALE+HF K PKP+AQEIT+LAD
Sbjct: 272 KWLEEADSSSGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAAQEITSLAD 331
Query: 333 SLQLEKEVVRVWFCNRRQKEKRMTPP-NTLGGPQD 366
SLQLEKEVVRVWFCNRRQKEKRMTPP T+ G +D
Sbjct: 332 SLQLEKEVVRVWFCNRRQKEKRMTPPGGTIPGAED 366
>sp|P56222|PO3F2_RAT POU domain, class 3, transcription factor 2 OS=Rattus norvegicus
GN=Pou3f2 PE=2 SV=1
Length = 445
Score = 309 bits (792), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/280 (61%), Positives = 193/280 (68%), Gaps = 29/280 (10%)
Query: 111 KPPPDMHRTSHQHGGMGSPHSWHTPVVSSHYIPSGNSGAASPLQHHSAYHVNVMNGMLHH 170
+PP +H ++ H G P +W + ++H PS + L ++ VN M G
Sbjct: 152 RPPHLVHHAANNHPG---PGAWRSAAAAAHLPPSMGASNGGLLYSQPSFTVNGMLGA--G 206
Query: 171 HQPSPQLHHSLRDIQAHSPSYSQSQHPDAPSG-----------------------SEEDA 207
QP+ HH LRD HP + S+ED
Sbjct: 207 GQPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQQPPPPPPPQGPPGHPGAHHDPHSDEDT 266
Query: 208 PTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKL 267
PTSDDLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKL
Sbjct: 267 PTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKL 326
Query: 268 KPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKPSAQEI 327
KPLL KWLEEADS++GSPTSIDKIA+QGRKRKKRTSIEV+VKGALE+HF K PKPSAQEI
Sbjct: 327 KPLLNKWLEEADSSSGSPTSIDKIASQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEI 386
Query: 328 TTLADSLQLEKEVVRVWFCNRRQKEKRMTPP-NTLGGPQD 366
T+LADSLQLEKEVVRVWFCNRRQKEKRMTPP TL G +D
Sbjct: 387 TSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGGTLPGAED 426
>sp|P79746|PO3F2_DANRE POU domain, class 3, transcription factor 2 OS=Danio rerio
GN=pou3f2 PE=1 SV=1
Length = 378
Score = 309 bits (791), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 193/336 (57%), Positives = 216/336 (64%), Gaps = 54/336 (16%)
Query: 62 NGHPVSLSAAHNPWVSLQPGAGADPWSSSMPG--------------IHNHHHPHHHQQSP 107
N HP LS AH +L G G PWSSS G +HN + H
Sbjct: 48 NSHP--LSHAHQWITALSHGEGG-PWSSSPLGEQDIKPAVQSPRDEMHNSSNLQHQS--- 101
Query: 108 VDIKPPPDMHRTSHQHGGMGSPHSWHTPVVSSHYIPS-GNSGAASPLQHHSAYHVNVM-- 164
+PP +H+T HG +W T ++ +IPS S S + ++ VN +
Sbjct: 102 ---RPPHLVHQT---HGNHHDSRAWRT--TTAAHIPSMATSNGQSLIYSQPSFSVNGLIP 153
Query: 165 -NGMLHHHQPSPQLHHSLRDIQA--HSPSYSQ----------SQHPDAPSGSEEDAPTSD 211
+G HH HS+RD HSP S H S+ED PTSD
Sbjct: 154 GSGQGIHH-------HSMRDAHEDHHSPHLSDHGHPPSQHQHQSHQSHHDHSDEDTPTSD 206
Query: 212 DLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL 271
DLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL
Sbjct: 207 DLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL 266
Query: 272 QKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKPSAQEITTLA 331
KWLEEADST+GSPTS+DKIAAQGRKRKKRTSIEV+VKGALE+HF K PKP+A EIT+LA
Sbjct: 267 NKWLEEADSTSGSPTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAASEITSLA 326
Query: 332 DSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGPQDG 367
DSLQLEKEVVRVWFCNRRQKEKRMTPP GGP G
Sbjct: 327 DSLQLEKEVVRVWFCNRRQKEKRMTPP---GGPLPG 359
>sp|P31365|P3F2A_XENLA POU domain, class 3, transcription factor 2-A OS=Xenopus laevis
GN=pou3f2-a PE=2 SV=2
Length = 382
Score = 308 bits (788), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 190/336 (56%), Positives = 209/336 (62%), Gaps = 51/336 (15%)
Query: 62 NGHPVSLSAAHNPWVSLQPGAGADPWSSSMPGIHNHHHPHHHQQSPVDIKPPPDMHRTS- 120
NGHP LS AH +L G GA PW++S G QQ DIKP R
Sbjct: 48 NGHP--LSHAHQWITALSHGDGA-PWATSPLG----------QQ---DIKPTVQSSRDEL 91
Query: 121 -------HQ----------HGGMGSPHSWHTPVVSSHYIPSGNSGAASPLQHHSAYHVNV 163
HQ HG P +W + S+H +S L ++ VN
Sbjct: 92 HVSGTLQHQSRAPHLVHPAHGNHHGPGAWRS-TGSTHLSSMASSNGQGLLYSQPSFTVN- 149
Query: 164 MNGMLHHHQPSPQLHHSLRDIQAHSPSYSQSQHPDAPSG------------SEEDAPTSD 211
GM++ HH LRD Q S+ED PTSD
Sbjct: 150 --GMINPGSGQGIHHHGLRDSHDDHHGDHGHQQVSQAQQQHSQLQGGHQDHSDEDTPTSD 207
Query: 212 DLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL 271
DLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL
Sbjct: 208 DLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL 267
Query: 272 QKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKPSAQEITTLA 331
KWLEEADS++GSPTSIDKIAAQGRKRKKRTSIEV+VKGALE+HF K PKPSA EIT+LA
Sbjct: 268 NKWLEEADSSSGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAPEITSLA 327
Query: 332 DSLQLEKEVVRVWFCNRRQKEKRMTPP-NTLGGPQD 366
DSLQLEKEVVRVWFCNRRQKEKRMTPP T+ G +D
Sbjct: 328 DSLQLEKEVVRVWFCNRRQKEKRMTPPGGTIPGAED 363
>sp|P31363|P3F1A_XENLA POU domain, class 3, transcription factor 1-A OS=Xenopus laevis
GN=pou3f1-a PE=2 SV=2
Length = 375
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/225 (72%), Positives = 175/225 (77%), Gaps = 18/225 (8%)
Query: 143 PSGNSGAASPLQHHSAYHVNVMNGMLHHHQPSPQ---LHHSLRDIQAHSPSYSQSQHPDA 199
PS NS PL + + + N +NGML PQ LHHS+RD P +Q
Sbjct: 130 PSSNS--HQPLIYSQSSYTN-LNGML-----GPQASSLHHSMRDPLHDDPGVHDTQVDSP 181
Query: 200 P-------SGSEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTIC 252
P S+EDAP+SDDLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTIC
Sbjct: 182 PQHLGHHQDHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTIC 241
Query: 253 RFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGAL 312
RFEALQLSFKNMCKLKPLL KWLEE DSTTGSPT++DKIAAQGRKRKKRTSIEV VKGAL
Sbjct: 242 RFEALQLSFKNMCKLKPLLNKWLEETDSTTGSPTNLDKIAAQGRKRKKRTSIEVGVKGAL 301
Query: 313 ETHFHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTP 357
E HF K PKPSA EIT+LADSLQLEKEVVRVWFCNRRQKEKRMTP
Sbjct: 302 ENHFLKCPKPSAHEITSLADSLQLEKEVVRVWFCNRRQKEKRMTP 346
>sp|Q90482|PO3F1_DANRE POU domain, class 3, transcription factor 1 OS=Danio rerio
GN=pou3f1 PE=2 SV=1
Length = 368
Score = 303 bits (777), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/195 (78%), Positives = 159/195 (81%), Gaps = 13/195 (6%)
Query: 173 PSPQLHHSLRD----------IQAHSPSYSQSQHPDAPSGSEEDAPTSDDLEAFAKQFKQ 222
P P LHH LRD Q SP S H D S+EDAP+SDDLE FAKQFKQ
Sbjct: 148 PQPSLHHGLRDPLHDDAGSHDNQMESPQQPFSHHQDH---SDEDAPSSDDLEQFAKQFKQ 204
Query: 223 RRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTT 282
RRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL KWLEE DS T
Sbjct: 205 RRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSNT 264
Query: 283 GSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKPSAQEITTLADSLQLEKEVVR 342
GSPT++DKIAAQGRKRKKRTSIEV VKGALE HF K PKPSA EITTLA +LQLEKEVVR
Sbjct: 265 GSPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITTLAGTLQLEKEVVR 324
Query: 343 VWFCNRRQKEKRMTP 357
VWFCNRRQKEKRMTP
Sbjct: 325 VWFCNRRQKEKRMTP 339
>sp|Q6DJN3|P3F4B_XENLA POU domain, class 3, transcription factor 4-B OS=Xenopus laevis
GN=pou3f4-b PE=2 SV=1
Length = 356
Score = 303 bits (775), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/235 (68%), Positives = 178/235 (75%), Gaps = 22/235 (9%)
Query: 146 NSGAASPLQHHSAYHVNV-------MNGMLHHHQPSP--------QLHHSLRDIQAHSPS 190
N+ ASP+ + S +NV ++GML H +P LH LR+ H
Sbjct: 111 NTWGASPVHNSSGQPINVYSQPGFTVSGMLDHGGLTPPPPSGTTQSLHPVLREATDHGDL 170
Query: 191 YSQSQHPDAPSGSEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTT 250
S H S+E+ PTSD+LE FAK FKQRRIKLGFTQADVGLALGTLYGNVFSQTT
Sbjct: 171 GSHHCH----DHSDEETPTSDELEQFAKLFKQRRIKLGFTQADVGLALGTLYGNVFSQTT 226
Query: 251 ICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKG 310
ICRFEALQLSFKNMCKLKPLL KWLEEADS+TGSPTSIDKIAAQGRKRKKRTSIEV+VKG
Sbjct: 227 ICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKG 286
Query: 311 ALETHFHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGPQ 365
LETHF K PKP+A EI++LADSLQLEKEVVRVWFCNRRQKEKRMTPP G PQ
Sbjct: 287 VLETHFLKCPKPAALEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPP---GDPQ 338
>sp|P62516|PO3F4_RAT POU domain, class 3, transcription factor 4 OS=Rattus norvegicus
GN=Pou3f4 PE=2 SV=1
Length = 361
Score = 303 bits (775), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/156 (91%), Positives = 150/156 (96%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+E+ PTSD+LE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK
Sbjct: 184 SDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 243
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEEADS+TGSPTSIDKIAAQGRKRKKRTSIEV+VKG LETHF K PKP
Sbjct: 244 NMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKP 303
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPP 358
+AQEI++LADSLQLEKEVVRVWFCNRRQKEKRMTPP
Sbjct: 304 AAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPP 339
>sp|P62515|PO3F4_MOUSE POU domain, class 3, transcription factor 4 OS=Mus musculus
GN=Pou3f4 PE=2 SV=1
Length = 361
Score = 303 bits (775), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/156 (91%), Positives = 150/156 (96%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+E+ PTSD+LE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK
Sbjct: 184 SDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 243
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEEADS+TGSPTSIDKIAAQGRKRKKRTSIEV+VKG LETHF K PKP
Sbjct: 244 NMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKP 303
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPP 358
+AQEI++LADSLQLEKEVVRVWFCNRRQKEKRMTPP
Sbjct: 304 AAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPP 339
>sp|Q812B1|PO3F4_MESAU POU domain, class 3, transcription factor 4 OS=Mesocricetus auratus
GN=Pou3f4 PE=2 SV=1
Length = 361
Score = 302 bits (774), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/156 (91%), Positives = 150/156 (96%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+E+ PTSD+LE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK
Sbjct: 184 SDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 243
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEEADS+TGSPTSIDKIAAQGRKRKKRTSIEV+VKG LETHF K PKP
Sbjct: 244 NMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKP 303
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPP 358
+AQEI++LADSLQLEKEVVRVWFCNRRQKEKRMTPP
Sbjct: 304 AAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPP 339
>sp|A1L0Z1|PO3F4_XENTR POU domain, class 3, transcription factor 4 OS=Xenopus tropicalis
GN=pou3f4 PE=2 SV=1
Length = 360
Score = 302 bits (773), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 144/163 (88%), Positives = 152/163 (93%), Gaps = 3/163 (1%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+E+ PTSD+LE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQ TICRFEALQLSFK
Sbjct: 183 SDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQATICRFEALQLSFK 242
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEEADS+TGSPTSIDKIAAQGRKRKKRTSIEV+VKG LETHF K PKP
Sbjct: 243 NMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKP 302
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGPQ 365
+AQEI++LADSLQLEKEVVRVWFCNRRQKEKRMTPP G PQ
Sbjct: 303 AAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPP---GDPQ 342
>sp|P31364|P3F4A_XENLA POU domain, class 3, transcription factor 4-A OS=Xenopus laevis
GN=pou3f4-a PE=2 SV=2
Length = 361
Score = 301 bits (772), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 144/163 (88%), Positives = 152/163 (93%), Gaps = 3/163 (1%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+E+ PTSD+LE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK
Sbjct: 184 SDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 243
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEEADS+TG+PTSIDKIAAQGRKRKKRTSIEV+VKG LETHF K PKP
Sbjct: 244 NMCKLKPLLNKWLEEADSSTGNPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKP 303
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGPQ 365
+A EIT+LADSLQLEKEVVRVWFCNRRQKEKRMTPP G PQ
Sbjct: 304 AALEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPP---GDPQ 343
>sp|P49335|PO3F4_HUMAN POU domain, class 3, transcription factor 4 OS=Homo sapiens
GN=POU3F4 PE=1 SV=2
Length = 361
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/156 (90%), Positives = 149/156 (95%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+E+ PTSD+LE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFE LQLSFK
Sbjct: 184 SDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEGLQLSFK 243
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEEADS+TGSPTSIDKIAAQGRKRKKRTSIEV+VKG LETHF K PKP
Sbjct: 244 NMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKP 303
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPP 358
+AQEI++LADSLQLEKEVVRVWFCNRRQKEKRMTPP
Sbjct: 304 AAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPP 339
>sp|Q03052|PO3F1_HUMAN POU domain, class 3, transcription factor 1 OS=Homo sapiens
GN=POU3F1 PE=2 SV=3
Length = 451
Score = 295 bits (756), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/162 (87%), Positives = 149/162 (91%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+EDAP+SDDLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK
Sbjct: 245 SDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 304
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEE DS++GSPT++DKIAAQGRKRKKRTSIEV VKGALE+HF K PKP
Sbjct: 305 NMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKP 364
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGP 364
SA EIT LADSLQLEKEVVRVWFCNRRQKEKRMTP G P
Sbjct: 365 SAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHP 406
>sp|P20267|PO3F1_RAT POU domain, class 3, transcription factor 1 OS=Rattus norvegicus
GN=Pou3f1 PE=2 SV=2
Length = 451
Score = 295 bits (756), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/162 (87%), Positives = 149/162 (91%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+EDAP+SDDLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK
Sbjct: 245 SDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 304
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEE DS++GSPT++DKIAAQGRKRKKRTSIEV VKGALE+HF K PKP
Sbjct: 305 NMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKP 364
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGP 364
SA EIT LADSLQLEKEVVRVWFCNRRQKEKRMTP G P
Sbjct: 365 SAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHP 406
>sp|P21952|PO3F1_MOUSE POU domain, class 3, transcription factor 1 OS=Mus musculus
GN=Pou3f1 PE=1 SV=1
Length = 449
Score = 295 bits (754), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 142/162 (87%), Positives = 149/162 (91%)
Query: 203 SEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 262
S+EDAP+SDDLE FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK
Sbjct: 243 SDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 302
Query: 263 NMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKP 322
NMCKLKPLL KWLEE DS++GSPT++DKIAAQGRKRKKRTSIEV VKGALE+HF K PKP
Sbjct: 303 NMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKP 362
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGP 364
SA EIT LADSLQLEKEVVRVWFCNRRQKEKRMTP G P
Sbjct: 363 SAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHP 404
>sp|P31370|POU1_DUGJA POU domain protein 1 OS=Dugesia japonica GN=POU1 PE=2 SV=1
Length = 559
Score = 275 bits (703), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 126/160 (78%), Positives = 139/160 (86%)
Query: 198 DAPSGSEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEAL 257
D SG ED P+SDDLE FAK FKQRRIKLG+TQADVGLALGTLYGNVFSQTTICRFEAL
Sbjct: 252 DHRSGKTEDLPSSDDLEQFAKMFKQRRIKLGYTQADVGLALGTLYGNVFSQTTICRFEAL 311
Query: 258 QLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFH 317
QLSFKNMCKL+PLLQKWL EADS++ SPT+ DKI+AQ RKRKKRTSIE VK LE+ F
Sbjct: 312 QLSFKNMCKLRPLLQKWLHEADSSSESPTNFDKISAQSRKRKKRTSIEANVKSILESSFM 371
Query: 318 KQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTP 357
K KPSAQ+I++LA+ L LEKEVVRVWFCNRRQKEKR+TP
Sbjct: 372 KLSKPSAQDISSLAEKLSLEKEVVRVWFCNRRQKEKRITP 411
>sp|P20268|HM06_CAEEL Homeobox protein ceh-6 OS=Caenorhabditis elegans GN=ceh-6 PE=2 SV=3
Length = 380
Score = 254 bits (650), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 125/162 (77%), Positives = 134/162 (82%), Gaps = 4/162 (2%)
Query: 198 DAPSGSEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEAL 257
D SE+ P DDLE FAKQFKQRRIKLG+TQADVG+ALGTLYGN+FSQTTICRFEAL
Sbjct: 182 DISDDSEQTCP--DDLEGFAKQFKQRRIKLGYTQADVGVALGTLYGNIFSQTTICRFEAL 239
Query: 258 QLSFKNMCKLKPLLQKWLEEADSTTGSPTS-IDKIAAQ-GRKRKKRTSIEVTVKGALETH 315
QLSFKNMCKLKPLL KWLEEADSTTGSP S +K+ Q GRKRKKRTSIEV VK LE H
Sbjct: 240 QLSFKNMCKLKPLLFKWLEEADSTTGSPNSTFEKMTGQAGRKRKKRTSIEVNVKSRLEFH 299
Query: 316 FHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTP 357
F KP+AQEIT +A LQLEKEVVRVWFCNRRQKEKR+ P
Sbjct: 300 FQSNQKPNAQEITQVAMELQLEKEVVRVWFCNRRQKEKRIAP 341
>sp|Q29087|PO3F3_PIG POU domain, class 3, transcription factor 3 (Fragment) OS=Sus
scrofa GN=POU3F3 PE=2 SV=1
Length = 131
Score = 254 bits (649), Expect = 9e-67, Method: Composition-based stats.
Identities = 120/131 (91%), Positives = 124/131 (94%)
Query: 220 FKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 279
F QRR+KLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL KWLEEAD
Sbjct: 1 FTQRRMKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 60
Query: 280 STTGSPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKPSAQEITTLADSLQLEKE 339
S+TGSPTSIDKIAAQGRKRKKRTSIEV+VKGALE+HF K PKPSAQEIT LADSLQLEKE
Sbjct: 61 SSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKE 120
Query: 340 VVRVWFCNRRQ 350
VVRVWFCN Q
Sbjct: 121 VVRVWFCNNLQ 131
>sp|P31368|PDM1_DROME Protein nubbin OS=Drosophila melanogaster GN=nub PE=2 SV=1
Length = 601
Score = 218 bits (555), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 103/152 (67%), Positives = 116/152 (76%), Gaps = 10/152 (6%)
Query: 216 FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWL 275
FAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFEAL LSFKNMCKLKPLLQKWL
Sbjct: 432 FAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWL 491
Query: 276 EEADSTTGSPTSI-DKIAAQ---------GRKRKKRTSIEVTVKGALETHFHKQPKPSAQ 325
++AD T + + D A Q GR+RKKRTSIE T++GALE F KP+++
Sbjct: 492 DDADRTIQATGGVFDPAALQATVSTPEIIGRRRKKRTSIETTIRGALEKAFLANQKPTSE 551
Query: 326 EITTLADSLQLEKEVVRVWFCNRRQKEKRMTP 357
EIT LAD L +EKEVVRVWFCNRRQKEKR+ P
Sbjct: 552 EITQLADRLSMEKEVVRVWFCNRRQKEKRINP 583
>sp|Q29076|PO2F1_PIG POU domain, class 2, transcription factor 1 OS=Sus scrofa GN=POU2F1
PE=2 SV=1
Length = 745
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 130/181 (71%), Gaps = 11/181 (6%)
Query: 184 IQAHSPSYSQSQHPDAPSGSEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYG 243
IQ S S + D PS E+ ++LE FAK FKQRRIKLGFTQ DVGLA+G LYG
Sbjct: 261 IQTLPQSQSTPKRIDTPS--LEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYG 318
Query: 244 NVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEA-----DSTTGSPTSIDK--IAAQG- 295
N FSQTTI RFEAL LSFKNMCKLKPLL+KWL +A DS SP++++ + +G
Sbjct: 319 NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSALCSPSALNSPGLGVEGL 378
Query: 296 -RKRKKRTSIEVTVKGALETHFHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKR 354
R+RKKRTSIE ++ ALE F + KP+++EIT +AD L +EKEV+RVWFCNRRQKEKR
Sbjct: 379 NRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKR 438
Query: 355 M 355
+
Sbjct: 439 I 439
>sp|Q9UKI9|PO2F3_HUMAN POU domain, class 2, transcription factor 3 OS=Homo sapiens
GN=POU2F3 PE=2 SV=3
Length = 436
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/166 (62%), Positives = 124/166 (74%), Gaps = 7/166 (4%)
Query: 200 PSGSEEDAPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQ 258
PS D P+ ++LE FAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFEAL
Sbjct: 177 PSSGGADEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALN 236
Query: 259 LSFKNMCKLKPLLQKWLEEADS-----TTGSPTSIDKIA-AQGRKRKKRTSIEVTVKGAL 312
LSFKNMCKLKPLL+KWL +A+S + +P+S ++ GRKRKKRTSIE ++ L
Sbjct: 237 LSFKNMCKLKPLLEKWLNDAESSPSDPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTL 296
Query: 313 ETHFHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPP 358
E F PKPS++EI+ +A+ L +EKEVVRVWFCNRRQKEKR+ P
Sbjct: 297 EKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRINCP 342
>sp|P42571|PO2F3_RAT POU domain, class 2, transcription factor 3 OS=Rattus norvegicus
GN=Pou2f3 PE=2 SV=1
Length = 430
Score = 213 bits (543), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 128/171 (74%), Gaps = 9/171 (5%)
Query: 195 QHPDAPSGSEEDAPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICR 253
+H P G++E PT ++LE FAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI R
Sbjct: 167 KHLPGPGGNDE--PTDLEELEKFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISR 224
Query: 254 FEALQLSFKNMCKLKPLLQKWLEEADS-----TTGSPTSIDKIA-AQGRKRKKRTSIEVT 307
FEAL LSFKNMCKLKPLL+KWL +A+S + +P+S ++ GRKRKKRTSIE
Sbjct: 225 FEALNLSFKNMCKLKPLLEKWLNDAESSPADPSASTPSSYPTLSEVFGRKRKKRTSIETN 284
Query: 308 VKGALETHFHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPP 358
++ LE F PKPS++EI+ +A+ L +EKEVVRVWFCNRRQKEKR+ P
Sbjct: 285 IRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRINCP 335
>sp|P16143|PO2F1_XENLA POU domain, class 2, transcription factor 1 OS=Xenopus laevis
GN=pou2f1 PE=1 SV=3
Length = 758
Score = 213 bits (541), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 116/154 (75%), Gaps = 9/154 (5%)
Query: 211 DDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPL 270
++LE FAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFEAL LSFKNMCKLKPL
Sbjct: 300 EELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPL 359
Query: 271 LQKWLEEADSTTGSPTSIDK---------IAAQGRKRKKRTSIEVTVKGALETHFHKQPK 321
L+KWL +A++ T T ++ + R+RKKRTSIE ++ ALE F + K
Sbjct: 360 LEKWLNDAENITSDSTLTNQSVLNSPGHGMEGLNRRRKKRTSIETNIRVALEKSFLENQK 419
Query: 322 PSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRM 355
P+++EIT +AD L +EKEV+RVWFCNRRQKEKR+
Sbjct: 420 PTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 453
>sp|P31362|PO2F3_MOUSE POU domain, class 2, transcription factor 3 OS=Mus musculus
GN=Pou2f3 PE=2 SV=2
Length = 431
Score = 211 bits (537), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 104/171 (60%), Positives = 127/171 (74%), Gaps = 9/171 (5%)
Query: 195 QHPDAPSGSEEDAPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICR 253
+H P G++E PT ++LE FAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI R
Sbjct: 167 KHLPGPGGNDE--PTDLEELEKFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISR 224
Query: 254 FEALQLSFKNMCKLKPLLQKWLEE-----ADSTTGSPTSIDKIA-AQGRKRKKRTSIEVT 307
FEAL LSFKNMCKLKPLL+KWL + +D + +P+S ++ GRKRKKRTSIE
Sbjct: 225 FEALNLSFKNMCKLKPLLEKWLNDPESSPSDPSASTPSSYPTLSEVFGRKRKKRTSIETN 284
Query: 308 VKGALETHFHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPP 358
++ LE F PKPS++EI+ +A+ L +EKEVVRVWFCNRRQKEKR+ P
Sbjct: 285 IRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRINCP 335
>sp|Q28BL7|PO2F1_XENTR POU domain, class 2, transcription factor 1 OS=Xenopus tropicalis
GN=pou2f1 PE=2 SV=1
Length = 757
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 96/155 (61%), Positives = 117/155 (75%), Gaps = 11/155 (7%)
Query: 211 DDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPL 270
++LE FAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFEAL LSFKNMCKLKPL
Sbjct: 300 EELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPL 359
Query: 271 LQKWLEEADSTTGSPTSIDK----------IAAQGRKRKKRTSIEVTVKGALETHFHKQP 320
L+KWL +A++ T S +S+ + R+RKKRTSIE ++ ALE F +
Sbjct: 360 LEKWLNDAENIT-SDSSLSNQSVLNSPGHGMEGLNRRRKKRTSIETNIRVALEKSFLENQ 418
Query: 321 KPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRM 355
KP+++EIT +AD L +EKEV+RVWFCNRRQKEKR+
Sbjct: 419 KPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 453
>sp|P14859|PO2F1_HUMAN POU domain, class 2, transcription factor 1 OS=Homo sapiens
GN=POU2F1 PE=1 SV=2
Length = 743
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 124/179 (69%), Gaps = 9/179 (5%)
Query: 184 IQAHSPSYSQSQHPDAPSGSEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYG 243
IQ S S + D PS E+ ++LE FAK FKQRRIKLGFTQ DVGLA+G LYG
Sbjct: 261 IQTLPQSQSTPKRIDTPS--LEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYG 318
Query: 244 NVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDK-------IAAQGR 296
N FSQTTI RFEAL LSFKNMCKLKPLL+KWL +A++ + + I R
Sbjct: 319 NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSR 378
Query: 297 KRKKRTSIEVTVKGALETHFHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRM 355
+RKKRTSIE ++ ALE F + KP+++EIT +AD L +EKEV+RVWFCNRRQKEKR+
Sbjct: 379 RRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 437
>sp|Q24705|PDM2_DROVI POU domain protein 2 (Fragment) OS=Drosophila virilis GN=pdm2 PE=2
SV=1
Length = 471
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/162 (62%), Positives = 118/162 (72%), Gaps = 13/162 (8%)
Query: 216 FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWL 275
FAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFEAL LSFKNMCKLKPLLQKWL
Sbjct: 268 FAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWL 327
Query: 276 EEADSTT----GSPTSIDKIAAQ---------GRKRKKRTSIEVTVKGALETHFHKQPKP 322
E+ADS+ G +I+ + GR+RKKRTSIE T++GALE F KP
Sbjct: 328 EDADSSVAKSAGGVFNINTMTTNLSSTPESILGRRRKKRTSIETTIRGALEQAFVLNCKP 387
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGP 364
+++EI L++ L ++KEVVRVWFCNRRQKEKR+ P L P
Sbjct: 388 TSEEINQLSERLHMDKEVVRVWFCNRRQKEKRINPSLDLDSP 429
>sp|P15143|PO2F1_CHICK POU domain, class 2, transcription factor 1 OS=Gallus gallus
GN=POU2F1 PE=2 SV=1
Length = 739
Score = 209 bits (531), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/154 (62%), Positives = 116/154 (75%), Gaps = 9/154 (5%)
Query: 211 DDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPL 270
++LE FAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFEAL LSFKNMCKLKPL
Sbjct: 280 EELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPL 339
Query: 271 LQKWLEEADSTTGSPTSIDKIA----AQG-----RKRKKRTSIEVTVKGALETHFHKQPK 321
L+KWL +A++ + T A QG R+RKKRTSIE ++ ALE F + K
Sbjct: 340 LEKWLNDAENLSSDSTLSSPSALNSPGQGIEGVNRRRKKRTSIETNIRVALEKSFLENQK 399
Query: 322 PSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRM 355
P+++EIT +AD L +EKEV+RVWFCNRRQKEKR+
Sbjct: 400 PTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 433
>sp|P31369|PDM2A_DROME POU domain protein 2, isoform A OS=Drosophila melanogaster GN=pdm2
PE=1 SV=1
Length = 498
Score = 208 bits (529), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 133/208 (63%), Gaps = 34/208 (16%)
Query: 216 FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWL 275
FAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFEAL LSFKNMCKLKPLLQKWL
Sbjct: 297 FAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWL 356
Query: 276 EEADSTT----GSPTSIDKIAAQ---------GRKRKKRTSIEVTVKGALETHFHKQPKP 322
E+ADST G +I+ + + GR+RKKRTSIE TV+ LE F KP
Sbjct: 357 EDADSTVAKSGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKP 416
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGPQDGMMEGQLGMHGYHHPD 382
+++EI+ L++ L ++KEV+RVWFCNRRQKEKR+ P L P
Sbjct: 417 TSEEISQLSERLNMDKEVIRVWFCNRRQKEKRINPSLDLDSP------------------ 458
Query: 383 LHGSPMGPHSHSHSHSPPMLSPSHQSMQ 410
G+P+ SH+ + P L+ SH M+
Sbjct: 459 -TGTPLS--SHAFGYPPQALNMSHMQME 483
>sp|P31503|PO2F1_RAT POU domain, class 2, transcription factor 1 (Fragment) OS=Rattus
norvegicus GN=Pou2f1 PE=2 SV=2
Length = 632
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 118/154 (76%), Gaps = 9/154 (5%)
Query: 211 DDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPL 270
++LE FAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFEAL LSFKNMCKLKPL
Sbjct: 173 EELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPL 232
Query: 271 LQKWLEEADSTTGSPTSIDKIA-------AQG--RKRKKRTSIEVTVKGALETHFHKQPK 321
L+KWL +A++ + T+ A A+G R+RKKRTSIE ++ ALE F + K
Sbjct: 233 LEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIETNIRVALEKSFMENQK 292
Query: 322 PSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRM 355
P++++IT +A+ L +EKEV+RVWFCNRRQKEKR+
Sbjct: 293 PTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 326
>sp|Q29013|PO2F2_PIG POU domain, class 2, transcription factor 2 OS=Sus scrofa GN=POU2F2
PE=2 SV=1
Length = 478
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 124/177 (70%), Gaps = 15/177 (8%)
Query: 196 HPDAPSGSE-----EDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTT 250
HP P E E+A ++LE FA+ FKQRRIKLGFTQ DVGLA+G LYGN FSQTT
Sbjct: 181 HPQPPKCLEPPSHPEEASDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTT 240
Query: 251 ICRFEALQLSFKNMCKLKPLLQKWLEEA-----DSTTGSPTSIDKIA-----AQGRKRKK 300
I RFEAL LSFKNMCKLKPLL+KWL +A DS+ SP + + + GR+RKK
Sbjct: 241 ISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSRPSLGFDGLPGRRRKK 300
Query: 301 RTSIEVTVKGALETHFHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTP 357
RTSIE V+ ALE F KP+++EI +A+ L +EKEV+RVWFCNRRQKEKR+ P
Sbjct: 301 RTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINP 357
>sp|P09086|PO2F2_HUMAN POU domain, class 2, transcription factor 2 OS=Homo sapiens
GN=POU2F2 PE=1 SV=3
Length = 479
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 121/172 (70%), Gaps = 17/172 (9%)
Query: 196 HPDAPSGSEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFE 255
HP+ PS EE LE FA+ FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFE
Sbjct: 193 HPEEPSDLEE-------LEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFE 245
Query: 256 ALQLSFKNMCKLKPLLQKWLEEA-----DSTTGSPT-----SIDKIAAQGRKRKKRTSIE 305
AL LSFKNMCKLKPLL+KWL +A DS+ SP S+ GR+RKKRTSIE
Sbjct: 246 ALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIE 305
Query: 306 VTVKGALETHFHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTP 357
V+ ALE F KP+++EI +A+ L +EKEV+RVWFCNRRQKEKR+ P
Sbjct: 306 TNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINP 357
>sp|Q9VK71|PDM2B_DROME POU domain protein 2, isoform B OS=Drosophila melanogaster GN=pdm2
PE=2 SV=2
Length = 893
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/162 (61%), Positives = 118/162 (72%), Gaps = 13/162 (8%)
Query: 216 FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWL 275
FAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFEAL LSFKNMCKLKPLLQKWL
Sbjct: 692 FAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWL 751
Query: 276 EEADSTT----GSPTSIDKIAAQ---------GRKRKKRTSIEVTVKGALETHFHKQPKP 322
E+ADST G +I+ + + GR+RKKRTSIE TV+ LE F KP
Sbjct: 752 EDADSTVAKSGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKP 811
Query: 323 SAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGP 364
+++EI+ L++ L ++KEV+RVWFCNRRQKEKR+ P L P
Sbjct: 812 TSEEISQLSERLNMDKEVIRVWFCNRRQKEKRINPSLDLDSP 853
>sp|P25425|PO2F1_MOUSE POU domain, class 2, transcription factor 1 OS=Mus musculus
GN=Pou2f1 PE=2 SV=3
Length = 770
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 118/154 (76%), Gaps = 9/154 (5%)
Query: 211 DDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPL 270
++LE FAK FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFEAL LSFKNMCKLKPL
Sbjct: 287 EELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPL 346
Query: 271 LQKWLEEADSTTGSPTSIDKIA-------AQG--RKRKKRTSIEVTVKGALETHFHKQPK 321
L+KWL +A++ + T+ A A+G R+RKKRTSIE ++ ALE F + K
Sbjct: 347 LEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIETNIRVALEKSFMENQK 406
Query: 322 PSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRM 355
P++++IT +A+ L +EKEV+RVWFCNRRQKEKR+
Sbjct: 407 PTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 440
>sp|Q00196|PO2F2_MOUSE POU domain, class 2, transcription factor 2 OS=Mus musculus
GN=Pou2f2 PE=2 SV=4
Length = 463
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 121/172 (70%), Gaps = 17/172 (9%)
Query: 196 HPDAPSGSEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFE 255
HP+ PS EE LE FA+ FKQRRIKLGFTQ DVGLA+G LYGN FSQTTI RFE
Sbjct: 177 HPEEPSDLEE-------LEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFE 229
Query: 256 ALQLSFKNMCKLKPLLQKWLEEA-----DSTTGSPT-----SIDKIAAQGRKRKKRTSIE 305
AL LSFKNMCKLKPLL+KWL +A DS+ SP S+ GR+RKKRTSIE
Sbjct: 230 ALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIE 289
Query: 306 VTVKGALETHFHKQPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTP 357
V+ ALE F KP+++EI +A+ L +EKEV+RVWFCNRRQKEKR+ P
Sbjct: 290 TNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINP 341
>sp|Q7T103|P5F11_XENLA POU domain, class 5, transcription factor 1.1 OS=Xenopus laevis
GN=pou5f1.1 PE=1 SV=1
Length = 449
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 91/156 (58%), Positives = 119/156 (76%), Gaps = 2/156 (1%)
Query: 201 SGSEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLS 260
S +EE+ P+ ++E FAK K +R+ LG+TQADVG ALG LYG +FSQTTICRFE+LQLS
Sbjct: 223 SDNEEEVPSESEMEQFAKDLKHKRVSLGYTQADVGYALGVLYGKMFSQTTICRFESLQLS 282
Query: 261 FKNMCKLKPLLQKWLEEADSTTGSPTSIDK--IAAQGRKRKKRTSIEVTVKGALETHFHK 318
FKNMC+LKP L++W+ EA++ I++ + AQ RKRK+RT+IE VKG LE++F K
Sbjct: 283 FKNMCQLKPFLERWVVEAENNDNLQELINREQVIAQTRKRKRRTNIENIVKGTLESYFMK 342
Query: 319 QPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKR 354
PKP AQE+ +A L ++K+VVRVWFCNRRQK KR
Sbjct: 343 CPKPGAQEMVQIAKELNMDKDVVRVWFCNRRQKGKR 378
>sp|Q90270|PO5F1_DANRE POU domain, class 5, transcription factor 1 OS=Danio rerio
GN=pou5f1 PE=2 SV=1
Length = 472
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/145 (64%), Positives = 115/145 (79%), Gaps = 2/145 (1%)
Query: 216 FAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWL 275
FAK+ K +RI LGFTQADVGLALG LYG +FSQTTICRFEALQLSFKNMCKLKPLLQ+WL
Sbjct: 260 FAKELKHKRITLGFTQADVGLALGNLYGKMFSQTTICRFEALQLSFKNMCKLKPLLQRWL 319
Query: 276 EEADSTTG--SPTSIDKIAAQGRKRKKRTSIEVTVKGALETHFHKQPKPSAQEITTLADS 333
EA+++ I+++ RKRK+RTS+E TV+ ALE++F K PKP+ EIT ++D
Sbjct: 320 NEAENSENPQDMYKIERVFVDTRKRKRRTSLEGTVRSALESYFVKCPKPNTLEITHISDD 379
Query: 334 LQLEKEVVRVWFCNRRQKEKRMTPP 358
L LE++VVRVWFCNRRQK KR+ P
Sbjct: 380 LGLERDVVRVWFCNRRQKGKRLALP 404
>sp|B3DM25|P5F11_XENTR POU domain, class 5, transcription factor 1.1 OS=Xenopus tropicalis
GN=pou5f1.1 PE=2 SV=1
Length = 459
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
Query: 201 SGSEEDAPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLS 260
S +EE+ P+ ++E FAK K +R+ +G+TQADVG ALG LYG +FSQTTICRFE+LQLS
Sbjct: 228 SDNEEEVPSESEMEQFAKDLKHKRVSMGYTQADVGYALGVLYGKMFSQTTICRFESLQLS 287
Query: 261 FKNMCKLKPLLQKWLEEADSTTGSPTSIDK--IAAQGRKRKKRTSIEVTVKGALETHFHK 318
FKNMC+LKP L++WL EA++ I++ + AQ RKRK+RT+IE VKG LE++F K
Sbjct: 288 FKNMCQLKPFLERWLVEAENNDNLQELINREQVIAQTRKRKRRTNIENIVKGTLESYFMK 347
Query: 319 QPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGPQDGMMEGQ 372
KP AQE+ +A L ++K+VVRVWFCNRRQK KR P +G GQ
Sbjct: 348 CSKPGAQEMVQIAKELNMDKDVVRVWFCNRRQKGKRQGMPTVDENDGEGYDVGQ 401
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,774,233
Number of Sequences: 539616
Number of extensions: 8361897
Number of successful extensions: 40144
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 552
Number of HSP's that attempted gapping in prelim test: 27260
Number of HSP's gapped (non-prelim): 7437
length of query: 417
length of database: 191,569,459
effective HSP length: 120
effective length of query: 297
effective length of database: 126,815,539
effective search space: 37664215083
effective search space used: 37664215083
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)