Query psy3403
Match_columns 511
No_of_seqs 333 out of 2542
Neff 5.1
Searched_HMMs 46136
Date Sat Aug 17 00:07:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3403.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3403hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3139|consensus 99.9 2.7E-26 5.9E-31 213.0 8.2 112 3-114 14-138 (165)
2 TIGR03448 mycothiol_MshD mycot 99.7 1.5E-15 3.2E-20 151.3 27.0 89 419-509 198-288 (292)
3 PRK10146 aminoalkylphosphonic 99.7 1.9E-16 4.2E-21 140.3 14.6 131 378-509 3-138 (144)
4 KOG3139|consensus 99.7 3.1E-16 6.8E-21 146.2 14.1 132 379-511 16-148 (165)
5 KOG3235|consensus 99.7 5.2E-17 1.1E-21 151.1 7.2 103 14-116 10-128 (193)
6 TIGR01575 rimI ribosomal-prote 99.7 3.9E-15 8.5E-20 128.3 15.5 117 389-510 1-117 (131)
7 PRK03624 putative acetyltransf 99.6 7.2E-15 1.6E-19 127.7 15.6 126 379-510 3-131 (140)
8 PRK10140 putative acetyltransf 99.6 3.4E-14 7.4E-19 127.8 17.8 130 379-510 4-142 (162)
9 PTZ00330 acetyltransferase; Pr 99.6 4.9E-14 1.1E-18 125.4 17.4 130 376-509 4-141 (147)
10 COG0456 RimI Acetyltransferase 99.6 4.1E-14 8.8E-19 129.4 15.4 129 382-510 14-155 (177)
11 PRK09491 rimI ribosomal-protei 99.6 1E-13 2.2E-18 124.3 16.6 121 383-509 5-125 (146)
12 TIGR03827 GNAT_ablB putative b 99.6 7.6E-14 1.6E-18 139.4 16.0 129 377-510 114-246 (266)
13 PF00583 Acetyltransf_1: Acety 99.5 6.9E-14 1.5E-18 112.8 12.2 82 424-505 1-83 (83)
14 TIGR02406 ectoine_EctA L-2,4-d 99.5 6.3E-14 1.4E-18 129.3 13.5 124 383-508 2-127 (157)
15 PLN02706 glucosamine 6-phospha 99.5 2.3E-13 5E-18 122.4 16.5 128 378-509 6-144 (150)
16 PRK10975 TDP-fucosamine acetyl 99.5 1.8E-13 4E-18 129.5 15.8 124 384-511 51-190 (194)
17 TIGR02382 wecD_rffC TDP-D-fuco 99.5 1.9E-13 4.2E-18 129.4 15.6 127 379-510 44-186 (191)
18 TIGR03103 trio_acet_GNAT GNAT- 99.5 3.4E-13 7.3E-18 148.1 18.9 135 375-509 79-217 (547)
19 PF13673 Acetyltransf_10: Acet 99.5 4.2E-13 9E-18 114.7 14.7 104 389-504 1-117 (117)
20 PF13527 Acetyltransf_9: Acety 99.5 9.9E-13 2.1E-17 114.7 14.8 120 383-507 3-127 (127)
21 KOG3216|consensus 99.5 9E-13 2E-17 122.3 15.1 130 379-509 4-146 (163)
22 PF13420 Acetyltransf_4: Acety 99.5 1.4E-12 3E-17 117.2 16.0 125 383-510 2-140 (155)
23 PF13523 Acetyltransf_8: Acety 99.5 8.2E-13 1.8E-17 119.2 14.3 128 383-510 2-142 (152)
24 PHA00673 acetyltransferase dom 99.5 1.1E-12 2.3E-17 122.7 14.2 126 383-510 10-147 (154)
25 PRK10809 ribosomal-protein-S5- 99.5 3.7E-12 8E-17 119.9 17.7 131 377-510 16-167 (194)
26 COG0456 RimI Acetyltransferase 99.4 5.1E-13 1.1E-17 122.1 10.6 112 12-132 18-155 (177)
27 PRK07757 acetyltransferase; Pr 99.4 1.8E-12 3.8E-17 116.9 14.0 114 383-509 5-122 (152)
28 PRK10151 ribosomal-protein-L7/ 99.4 8.1E-12 1.8E-16 115.9 17.1 130 377-510 9-156 (179)
29 PRK07922 N-acetylglutamate syn 99.4 3.6E-12 7.8E-17 119.4 14.6 121 378-509 5-127 (169)
30 PRK15130 spermidine N1-acetylt 99.4 1.1E-11 2.3E-16 115.8 16.4 129 378-510 6-146 (186)
31 PRK10514 putative acetyltransf 99.4 7.5E-12 1.6E-16 111.5 14.1 113 383-509 5-126 (145)
32 COG1247 Sortase and related ac 99.4 2.3E-11 5E-16 115.4 16.3 128 383-510 5-144 (169)
33 TIGR01686 FkbH FkbH-like domai 99.4 1.5E-11 3.3E-16 126.2 16.4 122 378-507 186-319 (320)
34 PHA01807 hypothetical protein 99.4 1.2E-11 2.7E-16 115.3 13.9 118 385-502 9-136 (153)
35 KOG3396|consensus 99.4 8.7E-12 1.9E-16 113.8 12.2 128 377-508 5-143 (150)
36 TIGR03448 mycothiol_MshD mycot 99.3 8.7E-12 1.9E-16 124.3 13.2 121 382-510 3-129 (292)
37 TIGR01890 N-Ac-Glu-synth amino 99.3 1.2E-11 2.6E-16 131.8 14.3 122 380-509 284-405 (429)
38 PRK10314 putative acyltransfer 99.3 8.4E-12 1.8E-16 115.4 10.9 121 385-511 12-136 (153)
39 PRK10562 putative acetyltransf 99.3 4.3E-11 9.4E-16 107.6 14.6 116 383-511 3-127 (145)
40 PRK05279 N-acetylglutamate syn 99.3 1.5E-11 3.3E-16 131.3 13.4 118 380-509 296-417 (441)
41 TIGR03585 PseH pseudaminic aci 99.3 4.9E-11 1.1E-15 107.1 14.3 124 383-510 4-139 (156)
42 PF13508 Acetyltransf_7: Acety 99.3 4.3E-11 9.4E-16 97.4 12.5 77 419-506 3-79 (79)
43 PRK09831 putative acyltransfer 99.3 2.5E-11 5.5E-16 109.7 12.2 108 383-509 4-126 (147)
44 PLN02825 amino-acid N-acetyltr 99.3 2E-11 4.4E-16 133.1 13.0 118 381-509 369-490 (515)
45 PRK12308 bifunctional arginino 99.3 4.2E-11 9.2E-16 133.2 14.2 120 376-509 461-584 (614)
46 PRK01346 hypothetical protein; 99.2 1.3E-10 2.9E-15 122.2 15.5 127 377-509 5-136 (411)
47 COG1246 ArgA N-acetylglutamate 99.2 8.3E-11 1.8E-15 109.6 11.0 115 383-508 4-122 (153)
48 PF13302 Acetyltransf_3: Acety 99.2 4.3E-10 9.2E-15 98.8 15.1 123 379-505 2-142 (142)
49 KOG3234|consensus 99.2 1.4E-11 3E-16 114.9 4.9 100 15-114 11-123 (173)
50 KOG3235|consensus 99.2 1E-10 2.2E-15 109.4 9.6 124 385-508 7-134 (193)
51 KOG2488|consensus 99.1 3.7E-10 8.1E-15 108.3 11.5 120 388-508 54-181 (202)
52 COG3153 Predicted acetyltransf 99.1 1.4E-09 3.1E-14 103.5 13.2 120 382-508 6-130 (171)
53 PF08445 FR47: FR47-like prote 99.0 2.9E-09 6.4E-14 89.9 11.9 63 447-510 21-83 (86)
54 PRK13688 hypothetical protein; 99.0 2.5E-09 5.4E-14 100.0 11.9 106 384-509 22-133 (156)
55 cd02169 Citrate_lyase_ligase C 99.0 1.7E-09 3.6E-14 111.0 11.0 77 420-508 7-83 (297)
56 KOG3138|consensus 99.0 1.5E-09 3.3E-14 104.5 8.8 128 382-510 19-153 (187)
57 KOG3234|consensus 99.0 2.3E-09 5.1E-14 100.2 8.5 125 385-510 7-132 (173)
58 COG1670 RimL Acetyltransferase 98.9 7.2E-09 1.5E-13 93.9 11.1 82 428-510 77-159 (187)
59 TIGR00124 cit_ly_ligase [citra 98.9 2.1E-08 4.6E-13 104.4 12.5 80 418-509 30-109 (332)
60 PRK10146 aminoalkylphosphonic 98.8 2.2E-08 4.7E-13 88.7 10.3 111 3-114 2-130 (144)
61 TIGR01575 rimI ribosomal-prote 98.8 3.8E-08 8.2E-13 84.7 10.8 98 15-114 1-108 (131)
62 COG3393 Predicted acetyltransf 98.8 6.9E-08 1.5E-12 97.1 11.9 90 415-509 173-262 (268)
63 TIGR03103 trio_acet_GNAT GNAT- 98.6 1.7E-07 3.8E-12 103.4 12.2 112 3-114 81-209 (547)
64 TIGR01211 ELP3 histone acetylt 98.6 2.6E-07 5.7E-12 101.5 12.4 90 418-510 410-517 (522)
65 COG3981 Predicted acetyltransf 98.6 5.5E-07 1.2E-11 85.5 11.9 90 420-510 69-160 (174)
66 COG2153 ElaA Predicted acyltra 98.6 2.9E-07 6.3E-12 85.4 8.9 85 422-511 52-138 (155)
67 cd04301 NAT_SF N-Acyltransfera 98.5 5.7E-07 1.2E-11 66.1 8.7 63 422-486 2-64 (65)
68 PRK03624 putative acetyltransf 98.5 1.2E-06 2.6E-11 76.0 11.5 107 4-113 2-121 (140)
69 PHA01807 hypothetical protein 98.5 7.8E-07 1.7E-11 83.2 9.6 102 15-116 16-137 (153)
70 PRK10140 putative acetyltransf 98.5 2.1E-06 4.6E-11 77.1 12.1 111 3-114 2-133 (162)
71 TIGR02406 ectoine_EctA L-2,4-d 98.4 1E-06 2.2E-11 81.4 9.4 103 12-114 5-120 (157)
72 TIGR01686 FkbH FkbH-like domai 98.4 1.7E-06 3.7E-11 89.0 11.5 105 5-113 187-312 (320)
73 PF12746 GNAT_acetyltran: GNAT 98.4 2.9E-06 6.4E-11 86.1 12.8 120 377-509 127-247 (265)
74 TIGR03827 GNAT_ablB putative b 98.4 1.7E-06 3.6E-11 86.8 9.8 111 3-114 114-237 (266)
75 KOG3397|consensus 98.3 2.3E-06 5E-11 81.6 9.4 76 426-507 64-139 (225)
76 PF08444 Gly_acyl_tr_C: Aralky 98.3 1.6E-06 3.5E-11 74.5 6.9 74 426-508 6-79 (89)
77 PTZ00330 acetyltransferase; Pr 98.3 9.6E-06 2.1E-10 72.1 11.7 109 1-113 3-132 (147)
78 PRK10975 TDP-fucosamine acetyl 98.2 7.6E-06 1.7E-10 77.6 9.8 106 7-114 49-180 (194)
79 PRK09491 rimI ribosomal-protei 98.2 1.5E-05 3.2E-10 71.5 10.6 104 7-114 4-117 (146)
80 TIGR02382 wecD_rffC TDP-D-fuco 98.2 1.4E-05 3.1E-10 75.7 10.8 107 6-114 45-177 (191)
81 PF14542 Acetyltransf_CG: GCN5 98.1 2.2E-05 4.7E-10 65.5 9.8 71 422-502 2-72 (78)
82 PF13673 Acetyltransf_10: Acet 98.1 1.1E-05 2.4E-10 68.8 8.1 91 15-114 1-114 (117)
83 PHA00673 acetyltransferase dom 98.0 2.2E-05 4.8E-10 73.9 9.1 105 7-113 8-137 (154)
84 PF00583 Acetyltransf_1: Acety 98.0 1.3E-05 2.8E-10 64.4 6.5 64 50-113 1-78 (83)
85 PF12568 DUF3749: Acetyltransf 98.0 5.1E-05 1.1E-09 69.3 10.9 111 386-509 11-125 (128)
86 PF13718 GNAT_acetyltr_2: GNAT 98.0 0.00011 2.5E-09 71.6 13.5 102 406-508 14-175 (196)
87 COG3818 Predicted acetyltransf 98.0 2.9E-05 6.3E-10 71.3 8.5 119 387-509 15-148 (167)
88 PF13420 Acetyltransf_4: Acety 98.0 7.4E-05 1.6E-09 67.1 10.8 103 12-114 5-131 (155)
89 KOG4135|consensus 97.9 7.2E-05 1.6E-09 70.1 10.4 98 412-509 56-170 (185)
90 PRK15130 spermidine N1-acetylt 97.9 7.7E-05 1.7E-09 69.7 10.6 111 3-114 5-137 (186)
91 KOG4144|consensus 97.9 6.2E-06 1.3E-10 77.5 3.0 122 385-509 17-161 (190)
92 PF13523 Acetyltransf_8: Acety 97.9 9E-05 1.9E-09 66.9 10.1 106 8-113 2-132 (152)
93 PF13527 Acetyltransf_9: Acety 97.8 0.00013 2.8E-09 63.5 9.0 94 7-101 2-113 (127)
94 TIGR03585 PseH pseudaminic aci 97.7 0.00025 5.4E-09 63.6 9.8 107 7-114 3-130 (156)
95 PLN02825 amino-acid N-acetyltr 97.7 5.4E-05 1.2E-09 83.4 6.5 100 11-114 373-482 (515)
96 COG0454 WecD Histone acetyltra 97.7 6.3E-05 1.4E-09 58.3 4.9 44 453-504 87-130 (156)
97 PRK07757 acetyltransferase; Pr 97.7 0.00031 6.7E-09 63.2 10.1 117 5-128 2-129 (152)
98 KOG3138|consensus 97.7 7.9E-05 1.7E-09 72.2 6.1 102 12-114 23-144 (187)
99 TIGR01890 N-Ac-Glu-synth amino 97.7 0.00015 3.3E-09 77.8 8.9 103 7-114 285-397 (429)
100 COG4552 Eis Predicted acetyltr 97.6 0.00015 3.3E-09 75.9 8.3 86 419-509 39-127 (389)
101 PRK05279 N-acetylglutamate syn 97.6 0.00011 2.5E-09 78.9 7.3 102 7-113 297-408 (441)
102 PLN02706 glucosamine 6-phospha 97.6 0.00067 1.5E-08 60.9 10.6 107 3-113 5-135 (150)
103 COG5628 Predicted acetyltransf 97.5 0.00062 1.3E-08 61.8 9.7 91 410-504 28-118 (143)
104 PRK07922 N-acetylglutamate syn 97.5 0.00074 1.6E-08 63.4 10.2 103 3-113 4-118 (169)
105 PRK12308 bifunctional arginino 97.5 0.00032 6.9E-09 78.8 8.9 119 4-132 463-594 (614)
106 PRK01346 hypothetical protein; 97.5 0.00055 1.2E-08 72.4 10.0 101 1-102 3-121 (411)
107 PF13480 Acetyltransf_6: Acety 97.5 0.0037 7.9E-08 54.6 13.5 105 379-488 20-135 (142)
108 COG2388 Predicted acetyltransf 97.4 0.00056 1.2E-08 60.1 6.9 62 417-482 13-74 (99)
109 PRK10809 ribosomal-protein-S5- 97.3 0.0018 3.9E-08 61.0 10.7 110 4-114 17-158 (194)
110 COG3375 Uncharacterized conser 97.3 0.0032 7E-08 62.7 11.6 113 379-493 3-120 (266)
111 PRK10514 putative acetyltransf 97.2 0.0027 5.8E-08 56.5 10.1 103 5-114 2-118 (145)
112 PRK10562 putative acetyltransf 97.2 0.0033 7.1E-08 56.4 9.9 104 8-118 3-122 (145)
113 COG1444 Predicted P-loop ATPas 97.1 0.0039 8.4E-08 71.4 12.1 100 406-508 457-590 (758)
114 PRK10151 ribosomal-protein-L7/ 97.1 0.0048 1E-07 57.2 10.4 111 3-114 9-147 (179)
115 PRK09831 putative acyltransfer 97.0 0.0013 2.8E-08 59.4 5.9 91 7-114 3-118 (147)
116 COG3053 CitC Citrate lyase syn 97.0 0.0045 9.9E-08 63.8 9.8 78 419-508 36-114 (352)
117 KOG3216|consensus 96.9 0.008 1.7E-07 56.8 10.5 110 3-113 2-137 (163)
118 COG3153 Predicted acetyltransf 96.7 0.0039 8.4E-08 59.8 6.9 89 11-99 9-114 (171)
119 PF06852 DUF1248: Protein of u 96.7 0.038 8.2E-07 53.6 13.5 126 379-509 4-137 (181)
120 PF00765 Autoind_synth: Autoin 96.4 0.091 2E-06 50.7 13.9 117 388-507 8-153 (182)
121 PF13302 Acetyltransf_3: Acety 96.2 0.03 6.5E-07 48.9 9.0 109 5-114 2-138 (142)
122 PRK10314 putative acyltransfer 96.1 0.013 2.8E-07 54.3 6.3 107 4-114 3-126 (153)
123 TIGR03694 exosort_acyl putativ 96.1 0.068 1.5E-06 53.6 11.8 125 380-507 9-196 (241)
124 TIGR03019 pepcterm_femAB FemAB 95.9 0.099 2.1E-06 54.0 12.5 125 378-510 151-282 (330)
125 PF13508 Acetyltransf_7: Acety 95.6 0.054 1.2E-06 43.7 7.2 61 45-113 3-73 (79)
126 cd02169 Citrate_lyase_ligase C 95.4 0.036 7.8E-07 57.4 6.9 58 47-113 8-75 (297)
127 PF01233 NMT: Myristoyl-CoA:pr 95.2 0.6 1.3E-05 44.6 13.7 111 377-487 22-150 (162)
128 COG3882 FkbH Predicted enzyme 95.2 0.064 1.4E-06 58.8 8.0 124 379-508 414-549 (574)
129 COG1243 ELP3 Histone acetyltra 94.9 0.032 7E-07 60.7 4.9 51 456-509 459-509 (515)
130 PRK13688 hypothetical protein; 94.9 0.042 9.2E-07 51.6 5.1 97 9-114 10-125 (156)
131 PF08445 FR47: FR47-like prote 94.9 0.065 1.4E-06 45.2 5.7 61 51-114 5-74 (86)
132 PRK13834 putative autoinducer 94.7 0.44 9.4E-06 46.9 11.8 118 387-507 15-163 (207)
133 COG1246 ArgA N-acetylglutamate 93.6 0.21 4.6E-06 47.3 6.9 90 11-101 6-106 (153)
134 cd04301 NAT_SF N-Acyltransfera 93.5 0.21 4.6E-06 36.0 5.4 53 48-100 2-65 (65)
135 PF04768 DUF619: Protein of un 93.3 1.1 2.4E-05 43.0 11.4 114 379-500 22-136 (170)
136 TIGR00124 cit_ly_ligase [citra 93.2 0.36 7.8E-06 50.9 8.6 59 45-112 31-99 (332)
137 PF04958 AstA: Arginine N-succ 92.9 0.84 1.8E-05 48.4 10.8 124 379-503 1-182 (342)
138 PF13880 Acetyltransf_13: ESCO 92.9 0.13 2.7E-06 42.8 3.7 31 447-477 5-35 (70)
139 COG3981 Predicted acetyltransf 92.9 0.23 4.9E-06 47.9 5.9 88 44-133 67-170 (174)
140 COG1247 Sortase and related ac 92.6 0.33 7.1E-06 46.7 6.7 102 12-113 8-134 (169)
141 PF04377 ATE_C: Arginine-tRNA- 92.3 2.5 5.4E-05 38.9 11.8 93 407-506 25-119 (128)
142 PRK01305 arginyl-tRNA-protein 92.3 3.2 6.9E-05 42.1 13.5 81 404-489 127-209 (240)
143 KOG2535|consensus 91.9 0.2 4.3E-06 53.1 4.6 49 458-509 498-547 (554)
144 KOG2488|consensus 91.4 0.32 7E-06 47.7 5.1 101 14-114 54-174 (202)
145 PRK10456 arginine succinyltran 91.3 1.6 3.4E-05 46.5 10.4 94 380-473 2-145 (344)
146 PF05301 Mec-17: Touch recepto 91.1 2.3 5.1E-05 38.8 10.0 50 449-501 48-97 (120)
147 PF09390 DUF1999: Protein of u 90.9 7 0.00015 37.0 13.1 121 380-508 2-140 (161)
148 COG3916 LasI N-acyl-L-homoseri 90.4 3.1 6.8E-05 41.4 10.9 88 417-507 50-161 (209)
149 cd04264 DUF619-NAGS DUF619 dom 90.1 1.4 3.1E-05 38.7 7.5 66 421-493 10-75 (99)
150 PF13480 Acetyltransf_6: Acety 89.4 4.2 9E-05 35.2 10.0 96 4-99 19-133 (142)
151 TIGR03244 arg_catab_AstA argin 88.2 2.9 6.3E-05 44.4 9.5 91 382-472 2-142 (336)
152 TIGR03245 arg_AOST_alph argini 87.7 3.2 6.9E-05 44.1 9.4 92 382-473 2-144 (336)
153 PHA01733 hypothetical protein 87.2 2 4.3E-05 40.8 6.9 89 414-508 42-131 (153)
154 cd04265 DUF619-NAGS-U DUF619 d 86.9 2.6 5.6E-05 37.2 7.0 64 422-493 12-75 (99)
155 TIGR03243 arg_catab_AOST argin 86.8 3.9 8.5E-05 43.4 9.5 92 382-473 2-143 (335)
156 PRK14852 hypothetical protein; 86.4 3.9 8.5E-05 48.9 10.2 131 377-510 27-182 (989)
157 COG5630 ARG2 Acetylglutamate s 84.9 3.8 8.3E-05 44.1 8.3 85 389-477 346-431 (495)
158 KOG2779|consensus 84.8 13 0.00028 40.0 12.0 63 419-481 134-201 (421)
159 COG2388 Predicted acetyltransf 82.8 2.2 4.7E-05 37.7 4.7 52 45-101 15-80 (99)
160 TIGR01211 ELP3 histone acetylt 82.7 2.4 5.2E-05 47.4 6.1 34 77-113 473-507 (522)
161 COG1670 RimL Acetyltransferase 82.3 9.2 0.0002 34.3 8.8 62 53-114 77-150 (187)
162 PF02474 NodA: Nodulation prot 82.2 1.9 4.1E-05 41.9 4.4 115 385-503 15-137 (196)
163 COG2401 ABC-type ATPase fused 82.1 0.67 1.5E-05 50.7 1.5 61 447-507 241-306 (593)
164 PHA00432 internal virion prote 81.9 12 0.00026 35.0 9.4 84 418-509 36-121 (137)
165 PF09924 DUF2156: Uncharacteri 81.3 13 0.00028 37.9 10.4 100 386-490 142-248 (299)
166 PF02799 NMT_C: Myristoyl-CoA: 81.0 22 0.00047 35.0 11.3 117 383-507 32-163 (190)
167 PF09924 DUF2156: Uncharacteri 80.3 5.9 0.00013 40.3 7.6 94 5-99 133-244 (299)
168 PF01853 MOZ_SAS: MOZ/SAS fami 79.7 5.2 0.00011 39.2 6.5 59 418-480 51-113 (188)
169 KOG3698|consensus 75.2 17 0.00036 41.4 9.5 55 454-508 823-877 (891)
170 PF12568 DUF3749: Acetyltransf 74.5 8.1 0.00017 35.8 5.9 44 44-89 37-90 (128)
171 COG2935 Putative arginyl-tRNA: 72.7 59 0.0013 33.4 12.0 82 403-489 127-216 (253)
172 PF14542 Acetyltransf_CG: GCN5 71.6 7.6 0.00017 32.3 4.7 46 47-97 2-59 (78)
173 KOG4601|consensus 71.6 23 0.00051 36.0 8.7 52 447-501 108-159 (264)
174 PF11039 DUF2824: Protein of u 70.8 59 0.0013 30.6 10.5 86 418-510 37-123 (151)
175 KOG2696|consensus 69.2 11 0.00025 40.5 6.4 49 430-478 200-248 (403)
176 KOG3698|consensus 69.1 6.4 0.00014 44.5 4.7 38 77-114 832-870 (891)
177 PLN03238 probable histone acet 68.3 11 0.00023 39.4 5.8 58 419-480 127-188 (290)
178 PF13444 Acetyltransf_5: Acety 65.6 17 0.00037 31.3 5.8 51 419-469 30-100 (101)
179 COG3138 AstA Arginine/ornithin 65.6 21 0.00046 37.4 7.2 89 381-469 3-141 (336)
180 KOG2036|consensus 62.2 7.4 0.00016 45.1 3.6 31 448-478 615-645 (1011)
181 PLN03239 histone acetyltransfe 61.3 16 0.00034 39.1 5.6 32 449-480 215-246 (351)
182 PRK00756 acyltransferase NodA; 60.9 21 0.00045 34.8 5.8 104 385-489 15-126 (196)
183 PTZ00064 histone acetyltransfe 59.8 14 0.0003 41.3 5.0 59 418-480 355-417 (552)
184 KOG2779|consensus 59.6 44 0.00096 36.1 8.5 117 382-506 263-394 (421)
185 cd04266 DUF619-NAGS-FABP DUF61 55.8 52 0.0011 29.6 7.2 67 423-494 13-83 (108)
186 PF01233 NMT: Myristoyl-CoA:pr 55.5 38 0.00083 32.6 6.6 92 2-93 21-143 (162)
187 PRK01305 arginyl-tRNA-protein 53.7 61 0.0013 33.0 8.1 80 29-109 126-216 (240)
188 COG5092 NMT1 N-myristoyl trans 53.6 1.1E+02 0.0023 32.8 10.0 102 380-481 82-199 (451)
189 PRK04531 acetylglutamate kinas 50.2 51 0.0011 35.8 7.4 92 386-493 260-351 (398)
190 PLN00104 MYST -like histone ac 49.3 17 0.00037 40.1 3.7 59 418-480 277-339 (450)
191 PF07645 EGF_CA: Calcium-bindi 46.5 10 0.00022 27.8 1.0 33 136-169 3-36 (42)
192 KOG3396|consensus 46.0 63 0.0014 30.6 6.3 56 52-107 63-132 (150)
193 KOG3014|consensus 45.0 1.2E+02 0.0026 31.3 8.6 32 446-477 182-213 (257)
194 PF11124 Pho86: Inorganic phos 43.9 1.4E+02 0.0031 31.5 9.2 88 421-508 171-270 (304)
195 PF04339 DUF482: Protein of un 43.1 1.6E+02 0.0036 31.8 9.8 111 386-508 211-328 (370)
196 COG3393 Predicted acetyltransf 43.1 66 0.0014 33.4 6.5 66 46-113 179-253 (268)
197 PF04377 ATE_C: Arginine-tRNA- 42.3 1.2E+02 0.0026 28.0 7.5 74 33-107 25-109 (128)
198 KOG2747|consensus 41.8 31 0.00067 37.6 4.1 31 449-479 262-292 (396)
199 PF15288 zf-CCHC_6: Zinc knuck 40.6 26 0.00056 26.3 2.4 34 158-191 3-37 (40)
200 COG0454 WecD Histone acetyltra 36.4 23 0.0005 26.7 1.7 30 77-114 97-127 (156)
201 PF01239 PPTA: Protein prenylt 36.2 33 0.00071 23.2 2.2 26 15-41 2-27 (31)
202 smart00179 EGF_CA Calcium-bind 34.6 30 0.00066 23.6 1.9 31 136-167 3-33 (39)
203 COG5653 Protein involved in ce 32.3 5.5E+02 0.012 28.3 11.7 84 401-489 250-337 (406)
204 COG5027 SAS2 Histone acetyltra 31.0 31 0.00068 37.0 2.1 56 418-477 233-292 (395)
205 cd01475 vWA_Matrilin VWA_Matri 30.1 72 0.0016 31.0 4.4 82 88-171 130-221 (224)
206 PF02388 FemAB: FemAB family; 29.1 1.4E+02 0.003 32.3 6.7 89 415-508 31-139 (406)
207 PF11090 DUF2833: Protein of u 28.9 1.3E+02 0.0028 26.2 5.1 28 481-508 56-83 (86)
208 cd03173 DUF619-like DUF619 dom 28.7 3E+02 0.0065 24.3 7.5 62 423-493 13-74 (98)
209 COG2898 Uncharacterized conser 26.7 1.8E+02 0.0039 33.1 7.2 61 426-490 400-460 (538)
210 PF09390 DUF1999: Protein of u 24.7 3.1E+02 0.0068 26.3 7.2 96 5-103 1-125 (161)
211 PF12746 GNAT_acetyltran: GNAT 23.9 2.5E+02 0.0054 29.0 7.0 71 35-112 157-237 (265)
212 COG3473 Maleate cis-trans isom 23.4 1.3E+02 0.0028 30.6 4.6 39 471-509 108-149 (238)
213 PF13718 GNAT_acetyltr_2: GNAT 22.4 1.4E+02 0.0031 29.5 4.7 45 44-89 25-119 (196)
214 smart00457 MACPF membrane-atta 22.3 3E+02 0.0064 26.4 6.9 56 3-58 6-66 (194)
215 PF04339 DUF482: Protein of un 22.3 7.1E+02 0.015 27.0 10.4 86 419-507 44-158 (370)
216 cd00053 EGF Epidermal growth f 21.5 69 0.0015 20.8 1.8 30 138-168 2-31 (36)
217 PF02388 FemAB: FemAB family; 21.1 5E+02 0.011 28.1 9.1 55 428-487 302-356 (406)
218 TIGR02990 ectoine_eutA ectoine 20.5 1.4E+02 0.0031 30.1 4.5 45 465-509 104-151 (239)
No 1
>KOG3139|consensus
Probab=99.93 E-value=2.7e-26 Score=213.00 Aligned_cols=112 Identities=31% Similarity=0.505 Sum_probs=102.1
Q ss_pred CceEEEeCCCCCChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeEEEEeCCeE--EEEEEeecc--cCCccceEEecc--
Q psy3403 3 GGIKYVSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLMDQLKT--INIIENDTA--TQSIRSALNNTT-- 76 (511)
Q Consensus 3 ~~i~y~~~~~e~dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~~~A~~g~~--vG~i~~~~~--~~~~rghiv~~a-- 76 (511)
..|++..|.++.+|+.||+||+++|||||||||||||.++||++||+|.+++. ||+|+|+.. .+..||+|...|
T Consensus 14 ~~i~~~~~~~~~~l~~im~Li~k~lsepyS~~tyrYf~~~wp~~~~~a~d~~~~~VGai~ck~~~~r~~~rgyi~mLaV~ 93 (165)
T KOG3139|consen 14 EVIRPSLYPAEEYLADIMRLIDKDLSEPYSIYTYRYFVPNWPCFCFLALDEKGDTVGAIVCKLDTHRNTLRGYIAMLAVD 93 (165)
T ss_pred eeeeeecchHHHHHHHHHHHHhhhcCchhHHHHHHhcccCCceEEEEEEcCCCceEEEEEEeccccCCcceEEEEEEEec
Confidence 46777788899999999999999999999999999999999999999955555 999999993 224699998887
Q ss_pred ------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 77 ------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 77 ------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
|||++|+.+|| .|++.||+||+||+.++|.+|++||-+
T Consensus 94 ~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~s 138 (165)
T KOG3139|consen 94 SEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYES 138 (165)
T ss_pred hhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHHh
Confidence 99999999999 999999999999999999999999965
No 2
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.74 E-value=1.5e-15 Score=151.27 Aligned_cols=89 Identities=27% Similarity=0.350 Sum_probs=75.4
Q ss_pred cEEEEEEE--CCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHH
Q psy3403 419 KFCFLAMD--EQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPAL 496 (511)
Q Consensus 419 ~~~fVA~d--dGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~Ai 496 (511)
..++++.+ +|++||++.+..... ....++|..++|+|+|||||||++|+.++++++++.|+..+.+.+.+.|.+|+
T Consensus 198 ~~~~~a~~~~~~~~vG~~~~~~~~~--~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~ 275 (292)
T TIGR03448 198 AGLFLAFDDAPGELLGFHWTKVHPD--EPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAV 275 (292)
T ss_pred CceEEEEECCCCcEEEEEEEEecCC--CCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHH
Confidence 44677777 689999976554321 12356788889999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEeeE
Q psy3403 497 KLYENLGFVRDKR 509 (511)
Q Consensus 497 kFYEKlGFe~vG~ 509 (511)
+||+|+||+..++
T Consensus 276 ~~y~k~GF~~~~~ 288 (292)
T TIGR03448 276 RTYEKLGFTVAEV 288 (292)
T ss_pred HHHHHcCCEEccc
Confidence 9999999998765
No 3
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.71 E-value=1.9e-16 Score=140.32 Aligned_cols=131 Identities=19% Similarity=0.192 Sum_probs=103.2
Q ss_pred ceEEEEcCCcCcHHHHHHHHHHhcCCCCCHHH----HHHHHhcCCcEEEEEEECCeEEEEEEEEEeccc-cccceEEEEE
Q psy3403 378 GIKYVSYKSELQMPDIIKLIQKDLSEPYSIYT----YRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHR-KVIRRGYIAM 452 (511)
Q Consensus 378 ~i~irr~lteeDle~L~eL~~~~f~~~~see~----~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~-~~~~~a~I~~ 452 (511)
.+.+++ ++.+|++.+.++........+.... +...+......++++..+|++||++.+...... .....++|..
T Consensus 3 ~~~ir~-a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~ 81 (144)
T PRK10146 3 ACELRP-ATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQE 81 (144)
T ss_pred ccEEee-CcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccchhheehe
Confidence 455655 7889999999998776655454333 333343445567888889999999988653211 1122467889
Q ss_pred EEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 453 LAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 453 IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
++|+|+|||+|||+.|+..++++|++.|+..+.|.+...|.+|++||+++||+..+.
T Consensus 82 l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~~~Gf~~~~~ 138 (144)
T PRK10146 82 LVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHF 138 (144)
T ss_pred eEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHcCCchhhh
Confidence 999999999999999999999999999999999999999999999999999987654
No 4
>KOG3139|consensus
Probab=99.69 E-value=3.1e-16 Score=146.18 Aligned_cols=132 Identities=66% Similarity=1.052 Sum_probs=115.8
Q ss_pred eEEEEcCCcCcHHHHHHHHHHhcCCCCCHHHHHHHHhcCCcEEEEEEECCe-EEEEEEEEEeccccccceEEEEEEEEcc
Q psy3403 379 IKYVSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLAMDEQK-CVGAIVCKLDIHRKVIRRGYIAMLAVDE 457 (511)
Q Consensus 379 i~irr~lteeDle~L~eL~~~~f~~~~see~~e~~le~~~~~~fVA~ddGe-LVG~a~l~~~~~~~~~~~a~I~~IaV~P 457 (511)
+.......+..++.+.++....+.++++.....++...|+..+|++.+++. .||++....+.... ..+++|.+++|++
T Consensus 16 i~~~~~~~~~~l~~im~Li~k~lsepyS~~tyrYf~~~wp~~~~~a~d~~~~~VGai~ck~~~~r~-~~rgyi~mLaV~~ 94 (165)
T KOG3139|consen 16 IRPSLYPAEEYLADIMRLIDKDLSEPYSIYTYRYFVPNWPCFCFLALDEKGDTVGAIVCKLDTHRN-TLRGYIAMLAVDS 94 (165)
T ss_pred eeeecchHHHHHHHHHHHHhhhcCchhHHHHHHhcccCCceEEEEEEcCCCceEEEEEEeccccCC-cceEEEEEEEech
Confidence 344444455567778888888999999999999999999999999998655 79999998776653 5689999999999
Q ss_pred CccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEeC
Q psy3403 458 NYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKRLF 511 (511)
Q Consensus 458 eyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~Ly 511 (511)
+|||||||++|++.+++.++.+|+..|+|+|...|.+|.++|+++||++.+++|
T Consensus 95 e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~sLGF~r~~r~~ 148 (165)
T KOG3139|consen 95 EYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYESLGFKRDKRLF 148 (165)
T ss_pred hhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHHhcCceEeccee
Confidence 999999999999999999999999999999999999999999999999987654
No 5
>KOG3235|consensus
Probab=99.68 E-value=5.2e-17 Score=151.07 Aligned_cols=103 Identities=11% Similarity=0.216 Sum_probs=95.6
Q ss_pred CChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeEEEE--eCCeEEEEEEeecccC----CccceEEecc--------Chh
Q psy3403 14 LQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLM--DQLKTINIIENDTATQ----SIRSALNNTT--------LVP 79 (511)
Q Consensus 14 ~dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~~~A--~~g~~vG~i~~~~~~~----~~rghiv~~a--------gig 79 (511)
+||-.+...+..+|+|+|-.-+|-|++-.||+|.||| .+|+|||||..++++. .-+|||.|+| |||
T Consensus 10 ~DL~~mQ~~Nl~~lpENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs~RrlGla 89 (193)
T KOG3235|consen 10 DDLLEMQHCNLLNLPENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRSYRRLGLA 89 (193)
T ss_pred HHHHHhhhcccccCcHHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehhhHHHhhHH
Confidence 5788889999999999999999999999999999999 6999999999999652 3389999999 999
Q ss_pred hHHHHhhh-hccc-cCccEEEEEEeecChhhhHhhhccc
Q psy3403 80 SNLNSESK-DVED-SNCNITVICHSYDNTQSQDILYNGV 116 (511)
Q Consensus 80 ~~L~~~~~-~~~~-~~~~ev~LEvr~sN~~A~~l~~~~~ 116 (511)
++||..|. +|.+ ++|.+|-|-||.||.+||.||-|-+
T Consensus 90 ~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl 128 (193)
T KOG3235|consen 90 QKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTL 128 (193)
T ss_pred HHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhhcc
Confidence 99999999 9999 9999999999999999999998654
No 6
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.65 E-value=3.9e-15 Score=128.26 Aligned_cols=117 Identities=21% Similarity=0.312 Sum_probs=101.9
Q ss_pred cHHHHHHHHHHhcCCCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHH
Q psy3403 389 QMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNL 468 (511)
Q Consensus 389 Dle~L~eL~~~~f~~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraL 468 (511)
|++.+.+++...|+.+|+.+.+...+......++++.+++++||++.+.... ..+++..++|+|+|||||+|++|
T Consensus 1 d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~-----~~~~i~~~~v~~~~rg~G~g~~l 75 (131)
T TIGR01575 1 DLKAVLEIEAAAFAFPWTEAQFAEELANYHLCYLLARIGGKVVGYAGVQIVL-----DEAHILNIAVKPEYQGQGIGRAL 75 (131)
T ss_pred CHHHHHHHHHhhCCCCCCHHHHHHHhcCCCceEEEEecCCeEEEEEEEEecC-----CCeEEEEEEECHHHcCCCHHHHH
Confidence 5788899999999989988888887765555667777799999999976533 34678889999999999999999
Q ss_pred HHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 469 VLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 469 L~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
++++++++++.|+.++.+.+.+.|.++++||+++||+.++..
T Consensus 76 l~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~~Gf~~~~~~ 117 (131)
T TIGR01575 76 LRELIDEAKGRGVNEIFLEVRVSNIAAQALYKKLGFNEIAIR 117 (131)
T ss_pred HHHHHHHHHHcCCCeEEEEEecccHHHHHHHHHcCCCccccc
Confidence 999999999999999999999999999999999999987653
No 7
>PRK03624 putative acetyltransferase; Provisional
Probab=99.64 E-value=7.2e-15 Score=127.72 Aligned_cols=126 Identities=22% Similarity=0.371 Sum_probs=99.7
Q ss_pred eEEEEcCCcCcHHHHHHHHHHhc-CCCCCHH--HHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEE
Q psy3403 379 IKYVSYKSELQMPDIIKLIQKDL-SEPYSIY--TYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAV 455 (511)
Q Consensus 379 i~irr~lteeDle~L~eL~~~~f-~~~~see--~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV 455 (511)
+.++ +++.+|++.+.+++.... ..+|... .+...+......++++..++++||++.+.... ..+++..++|
T Consensus 3 ~~ir-~~~~~d~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~-----~~~~i~~i~v 76 (140)
T PRK03624 3 MEIR-VFRQADFEAVIALWERCDLTRPWNDPEMDIERKLNHDPSLFLVAEVGGEVVGTVMGGYDG-----HRGWAYYLAV 76 (140)
T ss_pred eEEE-EcccccHHHHHHHHHhcCCCcchhhHHHHHHHHhcCCCceEEEEEcCCcEEEEEEeeccC-----CCceEEEEEE
Confidence 4445 478889999999987752 2333222 23333334456678888899999999875422 3467888999
Q ss_pred ccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 456 DENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 456 ~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
+|+|||+|+|+.|+..+++++++.|++++.+.+.+.|.++++||+|+||+..+.+
T Consensus 77 ~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k~GF~~~~~~ 131 (140)
T PRK03624 77 HPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYEALGYEEQDRI 131 (140)
T ss_pred CHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCccccEE
Confidence 9999999999999999999999999999999999999999999999999987653
No 8
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.61 E-value=3.4e-14 Score=127.83 Aligned_cols=130 Identities=16% Similarity=0.174 Sum_probs=99.0
Q ss_pred eEEEEcCCcCcHHHHHHHHHHh--c-----CCCCCHHHHHHHHhc-CCcEEEEEEECCeEEEEEEEEEeccccccceEEE
Q psy3403 379 IKYVSYKSELQMPDIIKLIQKD--L-----SEPYSIYTYRYFIHN-WPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYI 450 (511)
Q Consensus 379 i~irr~lteeDle~L~eL~~~~--f-----~~~~see~~e~~le~-~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I 450 (511)
+.+++ ++.+|++.+.++.... + ....+.+.+...+.. .....+++..+|++||++.+...........+.+
T Consensus 4 i~lr~-~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~ 82 (162)
T PRK10140 4 IVIRH-AETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADF 82 (162)
T ss_pred cEEEe-cchhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEecccccccceEEEE
Confidence 55555 6888999999998642 1 122344555555443 3345678888999999999875432111223444
Q ss_pred EEEEEccCccCCcHHHHHHHHHHHHHHH-CCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 451 AMLAVDENYRKRKIGSNLVLKAIRAMVA-DDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 451 ~~IaV~PeyRGQGIGraLL~aLie~Are-~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
+ ++|+|+|||+|||+.|+..++.++++ .|+.++.+.|.+.|.+|++||+|+||+..+..
T Consensus 83 ~-~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 142 (162)
T PRK10140 83 G-ICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTG 142 (162)
T ss_pred E-EEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHCCCEEEeec
Confidence 3 89999999999999999999999998 79999999999999999999999999998763
No 9
>PTZ00330 acetyltransferase; Provisional
Probab=99.60 E-value=4.9e-14 Score=125.36 Aligned_cols=130 Identities=18% Similarity=0.231 Sum_probs=97.5
Q ss_pred ccceEEEEcCCcCcHHHHHHHHHHhcC-CCCCHHHHHHHHhc---C--CcEEEEEEECCeEEEEEEEEEeccc--cccce
Q psy3403 376 IGGIKYVSYKSELQMPDIIKLIQKDLS-EPYSIYTYRYFIHN---W--PKFCFLAMDEQKCVGAIVCKLDIHR--KVIRR 447 (511)
Q Consensus 376 ~~~i~irr~lteeDle~L~eL~~~~f~-~~~see~~e~~le~---~--~~~~fVA~ddGeLVG~a~l~~~~~~--~~~~~ 447 (511)
...+.+++ ++++|++.+.+++..... ..++.+.+..+... . ....+++.++|++||++.+...... .....
T Consensus 4 ~~~~~ir~-~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~ 82 (147)
T PTZ00330 4 SGSLELRD-LEEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKFTRGGKCV 82 (147)
T ss_pred cceEEEEE-cccccHHHHHHHHHHhcCCCccchhHHHHHHHHHhcCCCceEEEEEeCCCEEEEEEEEEeccccccCCCce
Confidence 34566665 789999999999877554 33455554444321 1 1244556678999999988654321 11235
Q ss_pred EEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 448 GYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 448 a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
++|..++|+|+|||+|||++|++++++++++.|+.++.+.+ |.+|++||+++||+....
T Consensus 83 ~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~---n~~a~~~y~k~GF~~~~~ 141 (147)
T PTZ00330 83 GHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDC---TEDMVAFYKKLGFRACER 141 (147)
T ss_pred EEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEec---ChHHHHHHHHCCCEEece
Confidence 78999999999999999999999999999999998887765 789999999999998754
No 10
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.58 E-value=4.1e-14 Score=129.38 Aligned_cols=129 Identities=26% Similarity=0.352 Sum_probs=107.2
Q ss_pred EEcCCcCcHH--HHHHHHHHhcC--CCCCHHHHHHHHhcCCcEEEEEEEC---C----eEEEEEEEEEeccc-cccceEE
Q psy3403 382 VSYKSELQMP--DIIKLIQKDLS--EPYSIYTYRYFIHNWPKFCFLAMDE---Q----KCVGAIVCKLDIHR-KVIRRGY 449 (511)
Q Consensus 382 rr~lteeDle--~L~eL~~~~f~--~~~see~~e~~le~~~~~~fVA~dd---G----eLVG~a~l~~~~~~-~~~~~a~ 449 (511)
++.....|+. .+..+....|. .+|+...+...+..+....+++..+ + +++|++........ .....++
T Consensus 14 ir~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 93 (177)
T COG0456 14 IREAINKDLLDVALAALEARTFDIRLPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDGRPSADHEGH 93 (177)
T ss_pred hhhhhhcccchHHHHHHhhhcCCCCCcchHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEEecCCccccCccE
Confidence 3346667777 88888888887 6899999999998888888888863 3 59999988532211 0012689
Q ss_pred EEEEEEccCccCCcHHHHHHHHHHHHHHHCCC-CEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 450 IAMLAVDENYRKRKIGSNLVLKAIRAMVADDA-DEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 450 I~~IaV~PeyRGQGIGraLL~aLie~Are~G~-~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
|..++|+|+|||+|||++|++++++.+++.+. ..+.|.|..+|.+|++||+++||+..+..
T Consensus 94 i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~~~~~ 155 (177)
T COG0456 94 IYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEVVKIR 155 (177)
T ss_pred EEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHHcCCEEEeee
Confidence 99999999999999999999999999999886 89999999999999999999999987653
No 11
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.57 E-value=1e-13 Score=124.33 Aligned_cols=121 Identities=19% Similarity=0.257 Sum_probs=97.9
Q ss_pred EcCCcCcHHHHHHHHHHhcCCCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCC
Q psy3403 383 SYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKR 462 (511)
Q Consensus 383 r~lteeDle~L~eL~~~~f~~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQ 462 (511)
|.++.+|++.+.++.......+|....+.... ......+++..+|++||++.+.... ..+.+..++|+|+|||+
T Consensus 5 R~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vG~~~~~~~~-----~~~~~~~i~v~~~~rg~ 78 (146)
T PRK09491 5 SSLTPADLPAAYHIEQRAHAFPWSEKTFASNQ-GERYLNLKLTVNGQMAAFAITQVVL-----DEATLFNIAVDPDYQRQ 78 (146)
T ss_pred hcCChhhhHHHHHHHHhcCCCCCCHHHHHHHH-hcCceEEEEEECCeEEEEEEEEeec-----CceEEEEEEECHHHccC
Confidence 34788899999999877666677666554332 2233345566789999999886532 23567889999999999
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 463 KIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 463 GIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
|+|+.|++.+++.+++.++..+.+.+.+.|.+|++||+|+||+..+.
T Consensus 79 G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~Gf~~~~~ 125 (146)
T PRK09491 79 GLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEVTI 125 (146)
T ss_pred CHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHcCCEEeee
Confidence 99999999999999999999999999999999999999999998764
No 12
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.56 E-value=7.6e-14 Score=139.37 Aligned_cols=129 Identities=13% Similarity=0.093 Sum_probs=105.0
Q ss_pred cceEEEEcCCcCcHHHHHHHHHHhcC---CCC-CHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEE
Q psy3403 377 GGIKYVSYKSELQMPDIIKLIQKDLS---EPY-SIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAM 452 (511)
Q Consensus 377 ~~i~irr~lteeDle~L~eL~~~~f~---~~~-see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~ 452 (511)
+.+.+++ ++++|++.+.++....+. .++ ..+.+...+. ....+|++..+|++||++.+..... ...++|..
T Consensus 114 ~~~~IR~-a~~~D~~~l~~L~~~v~~~~~~~~~~~~~l~~~~~-~~~~~~v~~~~g~iVG~~~~~~~~~---~~~~eI~~ 188 (266)
T TIGR03827 114 EGFTLRI-ATEDDADAMAALYRKVFPTYPFPIHDPAYLLETMK-SNVVYFGVEDGGKIIALASAEMDPE---NGNAEMTD 188 (266)
T ss_pred CceEEEE-CCHHHHHHHHHHHHHHhccCCCCccCHHHHHHHhc-CCcEEEEEEECCEEEEEEEEecCCC---CCcEEEEE
Confidence 4566665 788999999999988764 222 2233333333 3456788888999999998754332 25688999
Q ss_pred EEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 453 LAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 453 IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
++|+|+|||+|||++||+.+++++++.|+..+++.+.+.|.+|+.+|+|+||+..|++
T Consensus 189 i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~k~GF~~~G~l 246 (266)
T TIGR03827 189 FATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFARLGYAYGGTL 246 (266)
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHHHcCCccccEE
Confidence 9999999999999999999999999999999999999999999999999999998875
No 13
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.55 E-value=6.9e-14 Score=112.77 Aligned_cols=82 Identities=29% Similarity=0.370 Sum_probs=75.0
Q ss_pred EEECCeEEEEEEEEEeccc-cccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHC
Q psy3403 424 AMDEQKCVGAIVCKLDIHR-KVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENL 502 (511)
Q Consensus 424 A~ddGeLVG~a~l~~~~~~-~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKl 502 (511)
|+++|++||++.+...... .....++|..++|+|+|||+|||+.|++++++++++.|+..+.+.+.+.|.++++||+|+
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k~ 80 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEKL 80 (83)
T ss_dssp EEETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHHT
T ss_pred CcCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHHc
Confidence 5789999999999876543 124789999999999999999999999999999999999999999999999999999999
Q ss_pred CCE
Q psy3403 503 GFV 505 (511)
Q Consensus 503 GFe 505 (511)
||+
T Consensus 81 Gf~ 83 (83)
T PF00583_consen 81 GFE 83 (83)
T ss_dssp TEE
T ss_pred CCC
Confidence 996
No 14
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.55 E-value=6.3e-14 Score=129.29 Aligned_cols=124 Identities=14% Similarity=0.145 Sum_probs=95.4
Q ss_pred EcCCcCcHHHHHHHHHHhcCCCCCH-HHHHHHHhcCCcEEEEEE-ECCeEEEEEEEEEeccccccceEEEEEEEEccCcc
Q psy3403 383 SYKSELQMPDIIKLIQKDLSEPYSI-YTYRYFIHNWPKFCFLAM-DEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYR 460 (511)
Q Consensus 383 r~lteeDle~L~eL~~~~f~~~~se-e~~e~~le~~~~~~fVA~-ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyR 460 (511)
|.++.+|++++.+|+.......+.. ..+..+........+++. .+|++||++.+..... .....++..++|+|+||
T Consensus 2 R~~~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~--~~~~~~i~~l~V~p~~r 79 (157)
T TIGR02406 2 RPPRIEDGAGIWELVKDCPPLDLNSSYAYLLLCTDFADTSIVAESEGGEIVGFVSGYLRPD--RPDVLFVWQVAVDPRAR 79 (157)
T ss_pred CCCccccHHHHHHHHHhCCCCCcccceehhhhhhhcCCcEEEEEcCCCeEEEEEEEEecCC--CCCeEEEEEEEEChHhc
Confidence 3477889999999998864422211 111222233345567777 4789999987654322 23457888999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEee
Q psy3403 461 KRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDK 508 (511)
Q Consensus 461 GQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG 508 (511)
|||||++|+..++++++..++.++.+.|.+.|.+|++||+|+||+...
T Consensus 80 g~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k~G~~~~~ 127 (157)
T TIGR02406 80 GKGLARRLLEALLERVACERVRHLETTITPDNQASRALFKALARRRGV 127 (157)
T ss_pred cCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHHhCcccCC
Confidence 999999999999999999999999999999999999999999998754
No 15
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.54 E-value=2.3e-13 Score=122.38 Aligned_cols=128 Identities=15% Similarity=0.184 Sum_probs=96.8
Q ss_pred ceEEEEcCCcCcHH-HHHHHHHHhcC-CCCCHHHHHHHHh---c--CCcEEEEEEE--CCeEEEEEEEEEec--cccccc
Q psy3403 378 GIKYVSYKSELQMP-DIIKLIQKDLS-EPYSIYTYRYFIH---N--WPKFCFLAMD--EQKCVGAIVCKLDI--HRKVIR 446 (511)
Q Consensus 378 ~i~irr~lteeDle-~L~eL~~~~f~-~~~see~~e~~le---~--~~~~~fVA~d--dGeLVG~a~l~~~~--~~~~~~ 446 (511)
.+.+++ ++.+|++ .+.+++..... .+++.+.+..++. . .....+++.+ +|++||++.+.... ......
T Consensus 6 ~~~ir~-~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~ 84 (150)
T PLN02706 6 KFKVRR-LEISDKSKGFLELLQQLTVVGDVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERKFIRNCGK 84 (150)
T ss_pred ceEEeE-hhhcccchHHHHHHHhccCCCCCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEeecccCCCc
Confidence 455665 6777877 58888776433 5677766665542 1 1233555655 68999999875322 111245
Q ss_pred eEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 447 RGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 447 ~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
.++|..++|+|+|||||||+.|+++++++|++.|++++.+.+.+.|. +||+|+||+.++.
T Consensus 85 ~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~---~~y~k~GF~~~g~ 144 (150)
T PLN02706 85 VGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENK---AFYEKCGYVRKEI 144 (150)
T ss_pred EEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccH---HHHHHCcCEEehh
Confidence 67888999999999999999999999999999999999999999994 6999999998874
No 16
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.53 E-value=1.8e-13 Score=129.48 Aligned_cols=124 Identities=22% Similarity=0.319 Sum_probs=96.5
Q ss_pred cCCcCcHHHHHHHHHHhcC-----CCC-CHH----HHHHHHhc-----CCcEEEEEE-ECCeEEEEEEEEEeccccccce
Q psy3403 384 YKSELQMPDIIKLIQKDLS-----EPY-SIY----TYRYFIHN-----WPKFCFLAM-DEQKCVGAIVCKLDIHRKVIRR 447 (511)
Q Consensus 384 ~lteeDle~L~eL~~~~f~-----~~~-see----~~e~~le~-----~~~~~fVA~-ddGeLVG~a~l~~~~~~~~~~~ 447 (511)
..+++|++.+.++....+. .+| +.+ .+..++.. ....++++. .+|++||++.+..... ..
T Consensus 51 ~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~~~----~~ 126 (194)
T PRK10975 51 VATETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLRELND----TD 126 (194)
T ss_pred cCCcccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEecCC----Cc
Confidence 4788899999999877643 222 222 22233221 122455555 4689999998865322 34
Q ss_pred EEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEeC
Q psy3403 448 GYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKRLF 511 (511)
Q Consensus 448 a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~Ly 511 (511)
++|..++|+|+|||||+|++|+..+++++++.|++++.+.|.+.|.+|++||+|+||+.++..|
T Consensus 127 ~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~Gf~~~~~~~ 190 (194)
T PRK10975 127 ARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRSGANIESTAY 190 (194)
T ss_pred eEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHHCCCeEeEEEe
Confidence 7899899999999999999999999999999999999999999999999999999999998764
No 17
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.53 E-value=1.9e-13 Score=129.40 Aligned_cols=127 Identities=20% Similarity=0.243 Sum_probs=97.0
Q ss_pred eEEEEcCCcCcHHHHHHHHHHhcC-----CCCC-HHH----HHHHHh----cC-CcEEE-EEEECCeEEEEEEEEEeccc
Q psy3403 379 IKYVSYKSELQMPDIIKLIQKDLS-----EPYS-IYT----YRYFIH----NW-PKFCF-LAMDEQKCVGAIVCKLDIHR 442 (511)
Q Consensus 379 i~irr~lteeDle~L~eL~~~~f~-----~~~s-ee~----~e~~le----~~-~~~~f-VA~ddGeLVG~a~l~~~~~~ 442 (511)
+.++ .++++|++.+.++....+. .+|. .+. +..++. .. ....+ ++..+|++||++.+.....
T Consensus 44 ~~lR-~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~~~- 121 (191)
T TIGR02382 44 PGAR-VATETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLRELND- 121 (191)
T ss_pred Ccce-eCChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEecCC-
Confidence 3444 4889999999999987653 2222 211 222221 11 22333 3455889999999865332
Q ss_pred cccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 443 KVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 443 ~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
..++|..++|+|+|||||+|++|+++++++++++|+.++.+.|.+.|.+|++||+|+||+.++..
T Consensus 122 ---~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~klGF~~~~~~ 186 (191)
T TIGR02382 122 ---TDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIRSGANIESTA 186 (191)
T ss_pred ---CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCccccce
Confidence 34789989999999999999999999999999999999999999999999999999999998764
No 18
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.52 E-value=3.4e-13 Score=148.13 Aligned_cols=135 Identities=19% Similarity=0.155 Sum_probs=109.4
Q ss_pred cccceEEEEcCCcCcHHHHHHHHHHhcCCCCCHHHHHHHHhcCCcEEEEEEE--CCeEEEEEEEEEecc--ccccceEEE
Q psy3403 375 MIGGIKYVSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLAMD--EQKCVGAIVCKLDIH--RKVIRRGYI 450 (511)
Q Consensus 375 ~~~~i~irr~lteeDle~L~eL~~~~f~~~~see~~e~~le~~~~~~fVA~d--dGeLVG~a~l~~~~~--~~~~~~a~I 450 (511)
...++.+++....+|++.+.+++......++..+.+...+......+|++.+ +|++||++.+..... ......++|
T Consensus 79 ~~~g~~IR~~~~~~D~~~I~~L~~~~~~~p~~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i 158 (547)
T TIGR03103 79 TPRGFTVRRLRGPADVDAINRLYAARGMVPVRVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSL 158 (547)
T ss_pred CCCCcEEEeCCChhHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEE
Confidence 3467888886678899999999998766667776665555455567788875 699999997642211 111234678
Q ss_pred EEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 451 AMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 451 ~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
..++|+|+|||+|||++||+++++++++.|+.++.|.|...|..|++||+|+||+.+..
T Consensus 159 ~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~klGf~~~~~ 217 (547)
T TIGR03103 159 WCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYEKLGFRRIPV 217 (547)
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCEEeeE
Confidence 99999999999999999999999999999999999999999999999999999998764
No 19
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.51 E-value=4.2e-13 Score=114.70 Aligned_cols=104 Identities=26% Similarity=0.357 Sum_probs=80.9
Q ss_pred cHHHHHHHHHHhcC---CC----------CCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEE
Q psy3403 389 QMPDIIKLIQKDLS---EP----------YSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAV 455 (511)
Q Consensus 389 Dle~L~eL~~~~f~---~~----------~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV 455 (511)
|++++.+|+...+. .. +..+.+...+......+|++.++|++||++.+. +.+.|..++|
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~--------~~~~i~~l~v 72 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAWRYSPEDLEEYLEEGSHTIFVAEEGGEIVGFAWLE--------PDGEISHLYV 72 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHHHSSHHHHHHHHCTCCCEEEEEEETTEEEEEEEEE--------TCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHHhcCHHHHHHHHHhcCCEEEEEEECCEEEEEEEEc--------CCCeEEEEEE
Confidence 67777777776443 11 345556666665557899999999999999985 1244999999
Q ss_pred ccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCC
Q psy3403 456 DENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGF 504 (511)
Q Consensus 456 ~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGF 504 (511)
+|+|||+|||++|+++++++++. |+..+.+. .|..|++||+++||
T Consensus 73 ~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~---~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 73 LPEYRGRGIGRALLDAAEKEAKD-GIRRLTVE---ANERARRFYRKLGF 117 (117)
T ss_dssp -GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEE---C-HHHHHHHHHTT-
T ss_pred ChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEE---eCHHHHHHHHhCCC
Confidence 99999999999999999999976 88776666 88999999999999
No 20
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.48 E-value=9.9e-13 Score=114.66 Aligned_cols=120 Identities=24% Similarity=0.337 Sum_probs=90.0
Q ss_pred EcCCcCcHHHHHHHHHHhcCCCCCHH-HHHHHH-hcCCcEEEEEEECCeEEEEEEEEEecc---ccccceEEEEEEEEcc
Q psy3403 383 SYKSELQMPDIIKLIQKDLSEPYSIY-TYRYFI-HNWPKFCFLAMDEQKCVGAIVCKLDIH---RKVIRRGYIAMLAVDE 457 (511)
Q Consensus 383 r~lteeDle~L~eL~~~~f~~~~see-~~e~~l-e~~~~~~fVA~ddGeLVG~a~l~~~~~---~~~~~~a~I~~IaV~P 457 (511)
|.++++|.+++.+++..+|+...... ...... ...+...++++++|++||.+.+..... ......++|..++|+|
T Consensus 3 R~~~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v~p 82 (127)
T PF13527_consen 3 RPLTESDFEQIIELFNEAFGDSESPPEIWEYFRNLYGPGRCVVAEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAVDP 82 (127)
T ss_dssp EEE-GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHTTEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-G
T ss_pred eECCHHHHHHHHHHHHHHCCCCCCchhhhhhhhcccCcCcEEEEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEECH
Confidence 34789999999999999998666554 111111 112468899999999999998854321 2233568999999999
Q ss_pred CccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEe
Q psy3403 458 NYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRD 507 (511)
Q Consensus 458 eyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~v 507 (511)
+|||||+|++|++++++.+++.|+..+.+.. ...+||+++||+..
T Consensus 83 ~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~-----~~~~~Y~~~G~~~~ 127 (127)
T PF13527_consen 83 EYRGRGLGRQLMRALLERARERGVPFIFLFP-----SSPPFYRRFGFEYA 127 (127)
T ss_dssp GGTTSSHHHHHHHHHHHHHHHTT-SEEEEE------SSHHHHHHTTEEEE
T ss_pred HHcCCCHHHHHHHHHHHHHHhCCCCEEEEec-----CChhhhhcCCCEEC
Confidence 9999999999999999999999999777754 23799999999863
No 21
>KOG3216|consensus
Probab=99.48 E-value=9e-13 Score=122.27 Aligned_cols=130 Identities=22% Similarity=0.157 Sum_probs=103.2
Q ss_pred eEEEEcCCcCcHHHHHHHHHHh--c-----CCCCCHHHHHH--HHhcCCcEEEEEEE---CCeEEEEEEEEEecccccc-
Q psy3403 379 IKYVSYKSELQMPDIIKLIQKD--L-----SEPYSIYTYRY--FIHNWPKFCFLAMD---EQKCVGAIVCKLDIHRKVI- 445 (511)
Q Consensus 379 i~irr~lteeDle~L~eL~~~~--f-----~~~~see~~e~--~le~~~~~~fVA~d---dGeLVG~a~l~~~~~~~~~- 445 (511)
+++| .++++|.+.+..++.+. | +...+++.+.. +++..-..++++.. ++.++|++.+........+
T Consensus 4 ~~IR-~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~~k 82 (163)
T KOG3216|consen 4 IRIR-LATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWLGK 82 (163)
T ss_pred eEEE-ecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeeccccccccc
Confidence 4444 58999999999998763 2 23334455554 34444455666654 7899999998765543334
Q ss_pred ceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 446 RRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 446 ~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
...||.+++|.|.|||+|+|+.|++.+.+.|.+.|+.++..-|...|.+|+.||++.|++....
T Consensus 83 ~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k~gaq~l~~ 146 (163)
T KOG3216|consen 83 QGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEKVGAQDLKE 146 (163)
T ss_pred ceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHHHhCccccce
Confidence 6689999999999999999999999999999999999999999999999999999999987554
No 22
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.48 E-value=1.4e-12 Score=117.22 Aligned_cols=125 Identities=21% Similarity=0.295 Sum_probs=93.5
Q ss_pred EcCCcCcHHHHHHHHHHh-----cCCC---CCHHHHHHHHh----cCCcEEEEEEE-CCeEEEEEEEEEeccccccceEE
Q psy3403 383 SYKSELQMPDIIKLIQKD-----LSEP---YSIYTYRYFIH----NWPKFCFLAMD-EQKCVGAIVCKLDIHRKVIRRGY 449 (511)
Q Consensus 383 r~lteeDle~L~eL~~~~-----f~~~---~see~~e~~le----~~~~~~fVA~d-dGeLVG~a~l~~~~~~~~~~~a~ 449 (511)
|+++++|++.+.++.... +... .+.+.+..++. ......|++.. +|++||++.+..... ....+.
T Consensus 2 R~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~--~~~~~~ 79 (155)
T PF13420_consen 2 RPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDP--YNHTAE 79 (155)
T ss_dssp EE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSS--GTTEEE
T ss_pred CCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeec--cCCEEE
Confidence 457899999999998752 1111 23344444443 23455666666 999999999875432 335566
Q ss_pred EEEEEEccCccCCcHHHHHHHHHHHHH-HHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 450 IAMLAVDENYRKRKIGSNLVLKAIRAM-VADDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 450 I~~IaV~PeyRGQGIGraLL~aLie~A-re~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
+. ++|.|++|++|+|+.|+..++++| ++.|++++.+.|.+.|.+|++||+++||+.++.+
T Consensus 80 ~~-~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~~GF~~~g~~ 140 (155)
T PF13420_consen 80 LS-IYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKKLGFEEEGEL 140 (155)
T ss_dssp EE-EEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHHTTEEEEEEE
T ss_pred Ee-eEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHhCCCEEEEEE
Confidence 66 788899999999999999999999 7899999999999999999999999999999865
No 23
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.48 E-value=8.2e-13 Score=119.25 Aligned_cols=128 Identities=20% Similarity=0.269 Sum_probs=94.1
Q ss_pred EcCC-cCcHHHHHHHHHHh----c-CCCCCHH---HHHHHHh-cCCcEEEEEEECCeEEEEEEEEEecccc--ccceEEE
Q psy3403 383 SYKS-ELQMPDIIKLIQKD----L-SEPYSIY---TYRYFIH-NWPKFCFLAMDEQKCVGAIVCKLDIHRK--VIRRGYI 450 (511)
Q Consensus 383 r~lt-eeDle~L~eL~~~~----f-~~~~see---~~e~~le-~~~~~~fVA~ddGeLVG~a~l~~~~~~~--~~~~a~I 450 (511)
|.++ .+|++.+.+++.+. + ...++.+ .+...+. ......+|+..+|+++|++.+....... ......+
T Consensus 2 R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~dg~~~g~~~~~~~~~~~~~~~~~~~~ 81 (152)
T PF13523_consen 2 RPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAEDDGEPIGYFEIYWPDEDYDADDGDRGI 81 (152)
T ss_dssp EE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEETTEEEEEEEEEEGGGSS---TTEEEE
T ss_pred eeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEECCEEEEEEEEecccccccCCCCEEEE
Confidence 3467 89999999998654 2 2333332 2333332 4456789999999999999875422211 2345678
Q ss_pred EEEEEccCccCCcHHHHHHHHHHHHHHHC-CCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 451 AMLAVDENYRKRKIGSNLVLKAIRAMVAD-DADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 451 ~~IaV~PeyRGQGIGraLL~aLie~Are~-G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
+.++|+|++||||+|+.+++.+++++++. ++.++.+.+++.|.+|+++|+|+||+.++++
T Consensus 82 ~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~GF~~~g~~ 142 (152)
T PF13523_consen 82 HRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEKAGFRKVGEF 142 (152)
T ss_dssp EEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHHTT-EEEEEE
T ss_pred eeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHHcCCEEeeEE
Confidence 88899999999999999999999999985 8999999999999999999999999999875
No 24
>PHA00673 acetyltransferase domain containing protein
Probab=99.46 E-value=1.1e-12 Score=122.72 Aligned_cols=126 Identities=13% Similarity=0.059 Sum_probs=100.4
Q ss_pred EcCCcCcHHHHHHHHHHhcC----------CCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccc--cccceEEE
Q psy3403 383 SYKSELQMPDIIKLIQKDLS----------EPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHR--KVIRRGYI 450 (511)
Q Consensus 383 r~lteeDle~L~eL~~~~f~----------~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~--~~~~~a~I 450 (511)
.+.+.+|++++.+|+.+.-. .+|. ..+...........++++++|++||++.+.+.+.. .....+.|
T Consensus 10 ~~A~~~D~paI~~LLadd~l~~~r~d~~~~~~y~-~af~ai~~dp~~~llVa~~~g~vVG~~~l~~~p~l~~~~~~~~~I 88 (154)
T PHA00673 10 AFAELADAPTFASLCAEYAHESANADLAGRAPDH-HAYAGMEAAGVAHFLGVFRGEELVGFACLLVTPVPHFKGQLIGTT 88 (154)
T ss_pred hhccHhhHHHHHHHHHhcccccccccccccchhH-HHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCccCCccEEEE
Confidence 35788999999999877211 1111 22556666777888999999999999998776643 12356899
Q ss_pred EEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 451 AMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 451 ~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
..++|+|++||+|||++|++.++++|+++|+..+++...|+- ..+.||.++|++.+.+-
T Consensus 89 e~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~-~tv~fy~~~g~~~~~~~ 147 (154)
T PHA00673 89 ESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEG-RLVQLLPAAGYRETNRT 147 (154)
T ss_pred EEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCc-cchHHHHhCCchhhchh
Confidence 999999999999999999999999999999999999876543 46999999999987643
No 25
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.46 E-value=3.7e-12 Score=119.87 Aligned_cols=131 Identities=14% Similarity=0.206 Sum_probs=94.8
Q ss_pred cceEEEEcCCcCcHHHHHHHHHH--hcCCCCC---------HHHH-------HHHHhcCCcEEEEEEE--CCeEEEEEEE
Q psy3403 377 GGIKYVSYKSELQMPDIIKLIQK--DLSEPYS---------IYTY-------RYFIHNWPKFCFLAMD--EQKCVGAIVC 436 (511)
Q Consensus 377 ~~i~irr~lteeDle~L~eL~~~--~f~~~~s---------ee~~-------e~~le~~~~~~fVA~d--dGeLVG~a~l 436 (511)
+.+.+++ ++++|++.+.++..+ .+..+|. .+.+ ...........|++.+ ++++||.+.+
T Consensus 16 ~rl~LR~-~~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~l 94 (194)
T PRK10809 16 DRLVVRL-VHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVANF 94 (194)
T ss_pred CcEEEEe-CCHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEEEE
Confidence 4566665 788899999998775 2221221 1111 1111222233455443 6799999998
Q ss_pred EEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHH-CCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 437 KLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVA-DDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 437 ~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are-~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
...... ....++|+ ++|.|+|||||+|+++++.+++++++ .|++++.+.|.+.|.+|+++|+|+||+.++.+
T Consensus 95 ~~~~~~-~~~~~eig-~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~Gf~~~g~~ 167 (194)
T PRK10809 95 SNVVRG-SFHACYLG-YSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLARLGFEKEGYA 167 (194)
T ss_pred EeecCC-CeeeEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHHCCCcEEeee
Confidence 654321 12345666 78999999999999999999999987 69999999999999999999999999988753
No 26
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.44 E-value=5.1e-13 Score=122.12 Aligned_cols=112 Identities=12% Similarity=0.132 Sum_probs=95.4
Q ss_pred CCCChh--HHHHHHhhhCC--CCccHHHHHHHHHhCCCeEEEEeC----C----eEEEEEEeecccCC----ccceEEec
Q psy3403 12 SELQMP--DIIKLIQKDLS--EPYSIYTYRYFIHNWPKFCFLMDQ----L----KTINIIENDTATQS----IRSALNNT 75 (511)
Q Consensus 12 ~e~dl~--~I~~l~~~~Ls--EpYsi~~yryfl~~wP~l~~~A~~----g----~~vG~i~~~~~~~~----~rghiv~~ 75 (511)
...|++ .+..+....+. .||+...|.+++.+||.+++++.. + ++|||+++...... .+|||.++
T Consensus 18 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~i~~i 97 (177)
T COG0456 18 INKDLLDVALAALEARTFDIRLPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDGRPSADHEGHIYNL 97 (177)
T ss_pred hhcccchHHHHHHhhhcCCCCCcchHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEEecCCccccCccEEEEE
Confidence 346777 89999999999 799999999999999999999954 3 59999999752221 28999999
Q ss_pred c--------ChhhHHHHhhh-hccccCc-cEEEEEEeecChhhhHhhhcccccCCCCCCCccccccc
Q psy3403 76 T--------LVPSNLNSESK-DVEDSNC-NITVICHSYDNTQSQDILYNGVTNSNHNDLGSNKLSER 132 (511)
Q Consensus 76 a--------gig~~L~~~~~-~~~~~~~-~ev~LEvr~sN~~A~~l~~~~~~~~~~~~~~~~~~~~~ 132 (511)
| |||++|+.+++ .+++.+. ..+.||||.+|++||+||-. +|.....+|
T Consensus 98 aV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~---------~GF~~~~~~ 155 (177)
T COG0456 98 AVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRK---------LGFEVVKIR 155 (177)
T ss_pred EEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHH---------cCCEEEeee
Confidence 8 99999999999 8989886 99999999999999999987 666654443
No 27
>PRK07757 acetyltransferase; Provisional
Probab=99.44 E-value=1.8e-12 Score=116.89 Aligned_cols=114 Identities=23% Similarity=0.211 Sum_probs=88.1
Q ss_pred EcCCcCcHHHHHHHHHHhcCC----CCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccC
Q psy3403 383 SYKSELQMPDIIKLIQKDLSE----PYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDEN 458 (511)
Q Consensus 383 r~lteeDle~L~eL~~~~f~~----~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~Pe 458 (511)
+.++.+|++.+.++....... +.+.+.+... ...++++..+|++||++.+.... ...++|..++|+|+
T Consensus 5 r~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~lvG~~~l~~~~----~~~~~i~~v~V~p~ 76 (152)
T PRK07757 5 RKARLSDVKAIHALINVYAKKGLMLPRSLDELYEN----IRDFYVAEEEGEIVGCCALHILW----EDLAEIRSLAVSED 76 (152)
T ss_pred eeCCcccHHHHHHHHHHHHhcCCccCCCHHHHHhc----cCcEEEEEECCEEEEEEEEEecc----CCceEEEEEEECHH
Confidence 347888999999998764432 2233333222 23467888899999999986532 23578989999999
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 459 YRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 459 yRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
|||+|+|++|+..+++++++.|+.++.+.+. +++||+|+||+..+.
T Consensus 77 ~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~-----~~~~Y~k~GF~~~~~ 122 (152)
T PRK07757 77 YRGQGIGRMLVEACLEEARELGVKRVFALTY-----QPEFFEKLGFREVDK 122 (152)
T ss_pred HcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC-----cHHHHHHCCCEEccc
Confidence 9999999999999999999999998877653 468999999998764
No 28
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.42 E-value=8.1e-12 Score=115.90 Aligned_cols=130 Identities=15% Similarity=0.147 Sum_probs=97.8
Q ss_pred cceEEEEcCCcCcHHHHHHHHH--Hhc-------C-CCCCHHHHHHHHhc-------CCcEEEEEEECCeEEEEEEEEEe
Q psy3403 377 GGIKYVSYKSELQMPDIIKLIQ--KDL-------S-EPYSIYTYRYFIHN-------WPKFCFLAMDEQKCVGAIVCKLD 439 (511)
Q Consensus 377 ~~i~irr~lteeDle~L~eL~~--~~f-------~-~~~see~~e~~le~-------~~~~~fVA~ddGeLVG~a~l~~~ 439 (511)
+.+.+++ ++++|++.+..++. ..+ + .+.+.+....++.. .....|++..+|++||++.+...
T Consensus 9 ~rl~Lr~-~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~l~~~ 87 (179)
T PRK10151 9 ESLELHA-VDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVLSFNRI 87 (179)
T ss_pred CcEEEEe-CCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECCEEEEEEEEEee
Confidence 4566665 78889999999873 211 1 22344544444421 11235777789999999988653
Q ss_pred ccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHH-CCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 440 IHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVA-DDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 440 ~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are-~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
... ...++|+ ++|+|+|||+|+|++++.++++++++ .|.+++.+.+.+.|.+|+++|+|+||+.+|.+
T Consensus 88 ~~~--~~~~~ig-~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek~Gf~~~g~~ 156 (179)
T PRK10151 88 EPL--NKTAYIG-YWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALRNGFTLEGCL 156 (179)
T ss_pred ccC--CCceEEE-EEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHHCCCEEEeEe
Confidence 221 2356776 68999999999999999999999987 68999999999999999999999999998875
No 29
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.42 E-value=3.6e-12 Score=119.40 Aligned_cols=121 Identities=17% Similarity=0.144 Sum_probs=91.1
Q ss_pred ceEEEEcCCcCcHHHHHHHHHHhcCCCC-CHHHHHHHHhcCCcEEEEEE-ECCeEEEEEEEEEeccccccceEEEEEEEE
Q psy3403 378 GIKYVSYKSELQMPDIIKLIQKDLSEPY-SIYTYRYFIHNWPKFCFLAM-DEQKCVGAIVCKLDIHRKVIRRGYIAMLAV 455 (511)
Q Consensus 378 ~i~irr~lteeDle~L~eL~~~~f~~~~-see~~e~~le~~~~~~fVA~-ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV 455 (511)
.+.+++ ++++|.+.+.+++........ ....+...+.. ...++++. .+|++||++.+.... ...+.|..++|
T Consensus 5 ~i~iR~-a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~-~~~~~va~~~~~~iiG~~~~~~~~----~~~~~i~~l~V 78 (169)
T PRK07922 5 AITVRR-ARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEA-VQEFWVAEHLDGEVVGCGALHVMW----EDLAEIRTVAV 78 (169)
T ss_pred Cceeec-CCHhhHHHHHHHHHHHhhcCccccchHHHHHhh-cCcEEEEEecCCcEEEEEEEeecC----CCceEEEEEEE
Confidence 355554 888999999999876443211 11122222322 34567887 899999999876532 24578999999
Q ss_pred ccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 456 DENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 456 ~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
+|+|||+|||++|++++++++++.|+.++.+.+. +++||+|+||+..+.
T Consensus 79 ~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~-----~~~fY~k~GF~~~~~ 127 (169)
T PRK07922 79 DPAARGRGVGHAIVERLLDVARELGLSRVFVLTF-----EVEFFARHGFVEIDG 127 (169)
T ss_pred CHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec-----cHHHHHHCCCEECcc
Confidence 9999999999999999999999999999988764 378999999998763
No 30
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.40 E-value=1.1e-11 Score=115.79 Aligned_cols=129 Identities=18% Similarity=0.237 Sum_probs=95.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHHhc------CCCCCH-HH----HHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccc
Q psy3403 378 GIKYVSYKSELQMPDIIKLIQKDL------SEPYSI-YT----YRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIR 446 (511)
Q Consensus 378 ~i~irr~lteeDle~L~eL~~~~f------~~~~se-e~----~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~ 446 (511)
.+.+++ ++.+|++.+.++..... ..++.. .. +...........|++..+|++||++.+...... ..
T Consensus 6 ~l~lR~-~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~~~~~~~~~~--~~ 82 (186)
T PRK15130 6 SVKLRP-LEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHV--HR 82 (186)
T ss_pred eeEEec-CCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEEECCEEEEEEEEEeecCC--CC
Confidence 455554 78889999988865421 112111 11 222223344567788889999999987654322 23
Q ss_pred eEEEEEEEEccCccCCcHHHHHHHHHHHHHHH-CCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 447 RGYIAMLAVDENYRKRKIGSNLVLKAIRAMVA-DDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 447 ~a~I~~IaV~PeyRGQGIGraLL~aLie~Are-~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
.+.++ ++|+|+|||+|+|++++..+++++++ .|.+++.+.+...|.+|++||+|+||+.++.+
T Consensus 83 ~~~~~-~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek~GF~~~~~~ 146 (186)
T PRK15130 83 RAEFQ-IIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFEVEGEL 146 (186)
T ss_pred eEEEE-EEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHHCCCEEEEEE
Confidence 45554 89999999999999999999999986 79999999999999999999999999988764
No 31
>PRK10514 putative acetyltransferase; Provisional
Probab=99.39 E-value=7.5e-12 Score=111.52 Aligned_cols=113 Identities=17% Similarity=0.243 Sum_probs=83.0
Q ss_pred EcCCcCcHHHHHHHHHHhcC------CCCCHHHHHHHHhc--CCcEEEEEE-ECCeEEEEEEEEEeccccccceEEEEEE
Q psy3403 383 SYKSELQMPDIIKLIQKDLS------EPYSIYTYRYFIHN--WPKFCFLAM-DEQKCVGAIVCKLDIHRKVIRRGYIAML 453 (511)
Q Consensus 383 r~lteeDle~L~eL~~~~f~------~~~see~~e~~le~--~~~~~fVA~-ddGeLVG~a~l~~~~~~~~~~~a~I~~I 453 (511)
+.++++|++.+.+++...+. .++..+.+...+.. .....+++. .+|++||++.+.. .++..+
T Consensus 5 r~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~---------~~~~~~ 75 (145)
T PRK10514 5 RRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLPEAPLWVAVDERDQPVGFMLLSG---------GHMEAL 75 (145)
T ss_pred eecchhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhccCceEEEEecCCcEEEEEEEec---------CcEeEE
Confidence 44788999999999876431 22333333333321 122244444 5899999987642 346679
Q ss_pred EEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 454 AVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 454 aV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
+|+|+|||||||++|++.+++.+ .++.+.+...|.+|++||+|+||+..+.
T Consensus 76 ~v~p~~rgkGig~~Ll~~~~~~~-----~~i~~~v~~~N~~a~~~yek~Gf~~~~~ 126 (145)
T PRK10514 76 FVDPDVRGCGVGRMLVEHALSLH-----PELTTDVNEQNEQAVGFYKKMGFKVTGR 126 (145)
T ss_pred EECHHhccCCHHHHHHHHHHHhc-----cccEEEeecCCHHHHHHHHHCCCEEecc
Confidence 99999999999999999999864 4678899999999999999999999875
No 32
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.36 E-value=2.3e-11 Score=115.41 Aligned_cols=128 Identities=19% Similarity=0.199 Sum_probs=102.3
Q ss_pred EcCCcCcHHHHHHHHHHhcC--------CCCCHHHHHHHHhcC---CcEEEEEEEC-CeEEEEEEEEEeccccccceEEE
Q psy3403 383 SYKSELQMPDIIKLIQKDLS--------EPYSIYTYRYFIHNW---PKFCFLAMDE-QKCVGAIVCKLDIHRKVIRRGYI 450 (511)
Q Consensus 383 r~lteeDle~L~eL~~~~f~--------~~~see~~e~~le~~---~~~~fVA~dd-GeLVG~a~l~~~~~~~~~~~a~I 450 (511)
+..+.+|++.+.++.+..+. .+.+.+.+..++... ....+++..+ |+++|++.+......+.-....-
T Consensus 5 r~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~tve 84 (169)
T COG1247 5 RPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFRERPAYRHTVE 84 (169)
T ss_pred ecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeEEEEEEeeeccCccccceEEE
Confidence 34788899999999987553 455666666655433 2256677655 99999999876544333333445
Q ss_pred EEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 451 AMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 451 ~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
.+++|+|++||+|||++|+++++..++.+|+..+...+.+.|.++++|++++||+..|..
T Consensus 85 ~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~~~GF~~~G~~ 144 (169)
T COG1247 85 LSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIALHEKLGFEEVGTF 144 (169)
T ss_pred EEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHHHHHCCCEEeccc
Confidence 679999999999999999999999999999999999999999999999999999998753
No 33
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.36 E-value=1.5e-11 Score=126.20 Aligned_cols=122 Identities=13% Similarity=0.183 Sum_probs=100.6
Q ss_pred ceEEEEcCCcCcHHHHHHHHHHh--cC---CCCCHHHHHHHHhcCCcEEEEEE--E---CCeEEEEEEEEEeccccccce
Q psy3403 378 GIKYVSYKSELQMPDIIKLIQKD--LS---EPYSIYTYRYFIHNWPKFCFLAM--D---EQKCVGAIVCKLDIHRKVIRR 447 (511)
Q Consensus 378 ~i~irr~lteeDle~L~eL~~~~--f~---~~~see~~e~~le~~~~~~fVA~--d---dGeLVG~a~l~~~~~~~~~~~ 447 (511)
.+.+++ ++++|++.+.+|.... |. ..|+.+.+..++... . .+++. + ++.+||++.+... ...
T Consensus 186 ~~~Ir~-a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~~-~-~~~~~~~d~~gd~givG~~~~~~~-----~~~ 257 (320)
T TIGR01686 186 SLNISK-NDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQKE-E-IVTVSMSDRFGDSGIIGIFVFEKK-----EGN 257 (320)
T ss_pred EEEEEE-CChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcCC-C-EEEEEEEecCCCCceEEEEEEEec-----CCc
Confidence 356665 7899999999999876 43 678888888887654 3 34333 2 5679999987653 245
Q ss_pred EEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEec--CCHHHHHHHHHCCCEEe
Q psy3403 448 GYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEI--TNRPALKLYENLGFVRD 507 (511)
Q Consensus 448 a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~--~N~~AikFYEKlGFe~v 507 (511)
.+|..++|+|.+||||||++||..++++|++.|+.+++|.+.+ .|.+|++||+++||+..
T Consensus 258 ~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 258 LFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred EEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHHHHHHcCCccC
Confidence 7899999999999999999999999999999999999999864 79999999999999865
No 34
>PHA01807 hypothetical protein
Probab=99.35 E-value=1.2e-11 Score=115.30 Aligned_cols=118 Identities=11% Similarity=0.043 Sum_probs=87.4
Q ss_pred CCcCcHHHHHHHHHHhc---CCC--CC--HHHHHHH---HhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEE
Q psy3403 385 KSELQMPDIIKLIQKDL---SEP--YS--IYTYRYF---IHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLA 454 (511)
Q Consensus 385 lteeDle~L~eL~~~~f---~~~--~s--ee~~e~~---le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~Ia 454 (511)
...+|+..+..+....+ +.. |. ++..... +.......++++++|++||++.+.............+..|+
T Consensus 9 ~~~~d~~~~~~l~l~~l~e~p~~~~w~s~ee~~~~~~~~~~~~~~~~lva~~dg~lvG~~~l~~~~~~~~~~i~~l~~lY 88 (153)
T PHA01807 9 AKAGTPSELQGLCWLAIQELEEFTLFRSKEEALERILDSTESNDRTELLVFRDGKLAGIAVLVFEDDPHVGPCLGVQWQY 88 (153)
T ss_pred hhhCCHHHHHHHHHHHHHhCccCCCCCChHHHHHHHHHHhhCCCceEEEEEECCEEEEEEEEEcCCCcceeeeccceeEE
Confidence 45678888888876544 322 32 2222222 23344566888899999999988654422112223345589
Q ss_pred EccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHC
Q psy3403 455 VDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENL 502 (511)
Q Consensus 455 V~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKl 502 (511)
|+|+|||+|||++||+.++++|++.|+..+.+.|.+.|.+|++||++.
T Consensus 89 V~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~~~ 136 (153)
T PHA01807 89 VLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYRRV 136 (153)
T ss_pred ECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999984
No 35
>KOG3396|consensus
Probab=99.35 E-value=8.7e-12 Score=113.81 Aligned_cols=128 Identities=20% Similarity=0.307 Sum_probs=99.0
Q ss_pred cceEEEEcCCcCcHHH-HHHHHHHhcC-CCCCHHHHHHHHh---cCCcEEEE--EEE--CCeEEEEEEEEEecc--cccc
Q psy3403 377 GGIKYVSYKSELQMPD-IIKLIQKDLS-EPYSIYTYRYFIH---NWPKFCFL--AMD--EQKCVGAIVCKLDIH--RKVI 445 (511)
Q Consensus 377 ~~i~irr~lteeDle~-L~eL~~~~f~-~~~see~~e~~le---~~~~~~fV--A~d--dGeLVG~a~l~~~~~--~~~~ 445 (511)
..+.+|+ +..+|+.. +.+++.+... ...+++.|...+. ...+++++ +++ .+++||.+.+.+... +..+
T Consensus 5 ~~~~lR~-L~~~D~~kGf~elL~qLT~vG~vt~e~F~krf~~mk~~~~~Y~i~Vied~~s~~vigtatL~IE~KfIh~~g 83 (150)
T KOG3396|consen 5 DGFKLRP-LEEDDYGKGFIELLKQLTSVGVVTREQFEKRFEAMKKSGDWYYIVVIEDKESEKVIGTATLFIERKFIHGCG 83 (150)
T ss_pred CceEEee-cccccccchHHHHHHHHhhccccCHHHHHHHHHHHHhcCCcEEEEEEEeCCcCeEEEEEEEEEehhhhhccc
Confidence 3456665 67778776 8888776543 4556666665443 23443433 333 589999999987654 2356
Q ss_pred ceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEee
Q psy3403 446 RRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDK 508 (511)
Q Consensus 446 ~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG 508 (511)
..++|.+++|+++|||+++|+.|+..++..++..|+.++.|++.+.| +.||+|+||...+
T Consensus 84 ~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~n---v~FYeKcG~s~~~ 143 (150)
T KOG3396|consen 84 SRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKN---VKFYEKCGYSNAG 143 (150)
T ss_pred ccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhh---hhHHHHcCccccc
Confidence 77999999999999999999999999999999999999999999988 7999999998754
No 36
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.35 E-value=8.7e-12 Score=124.30 Aligned_cols=121 Identities=19% Similarity=0.111 Sum_probs=92.9
Q ss_pred EEcCCcCcHHHHHHHHHHhcC----CCCCHHHHHHHHh--cCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEE
Q psy3403 382 VSYKSELQMPDIIKLIQKDLS----EPYSIYTYRYFIH--NWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAV 455 (511)
Q Consensus 382 rr~lteeDle~L~eL~~~~f~----~~~see~~e~~le--~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV 455 (511)
+..++++|++++.+|...++. .+|+.+....+.. ......+++.++|++||++.+..... ...++..++|
T Consensus 3 ~~~l~~~d~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~----~~~~~~~l~V 78 (292)
T TIGR03448 3 RAALDADLRRDVRELLAAATAVDGVAPVSEQVLRGLREPGAGHTRHLVAVDSDPIVGYANLVPARG----TDPAMAELVV 78 (292)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHhhccccCCCCceEEEEEECCEEEEEEEEEcCCC----CcceEEEEEE
Confidence 345778899999999886543 4577655433321 12345778888999999998866432 2357888999
Q ss_pred ccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 456 DENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 456 ~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
+|+|||||||++||+.+++.+. .++.+.+...|.+|++||+++||+..+..
T Consensus 79 ~p~~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~a~~fy~~~Gf~~~~~~ 129 (292)
T TIGR03448 79 HPAHRRRGIGRALIRALLAKGG----GRLRVWAHGDLPAARALASRLGLVPTREL 129 (292)
T ss_pred CHhhcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHHHHHHHHHCCCEEccEE
Confidence 9999999999999999999764 45788888899999999999999987653
No 37
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.34 E-value=1.2e-11 Score=131.83 Aligned_cols=122 Identities=14% Similarity=0.082 Sum_probs=93.0
Q ss_pred EEEEcCCcCcHHHHHHHHHHhcCCCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCc
Q psy3403 380 KYVSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENY 459 (511)
Q Consensus 380 ~irr~lteeDle~L~eL~~~~f~~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~Pey 459 (511)
.++ .++.+|++.+.+++.......+........+......+++++.+|++||++.+..... ...++|..++|+|+|
T Consensus 284 ~IR-~at~~Dl~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~V~~~dg~iVG~~~~~~~~~---~~~~~I~~l~V~p~~ 359 (429)
T TIGR01890 284 SIR-QATIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSIIEHDGNIIGCAALYPYAE---EDCGEMACLAVSPEY 359 (429)
T ss_pred heE-ECCHHHHHHHHHHHHHHHHcCCchhhhHHHHHhhcCcEEEEEECCEEEEEEEEEecCC---CCeEEEEEEEECHHH
Confidence 344 4788999999999865444333333333333333445778888999999998876432 246889999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 460 RKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 460 RGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
||+|+|++||++++++|+++|+..+++.. .| +++||+++||+.++.
T Consensus 360 Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~--~~--a~~fY~k~GF~~~g~ 405 (429)
T TIGR01890 360 QDGGRGERLLAHIEDRARQMGISRLFVLT--TR--TGHWFRERGFQTASV 405 (429)
T ss_pred cCCCHHHHHHHHHHHHHHHcCCCEEEEee--cc--hHHHHHHCCCEECCh
Confidence 99999999999999999999999876543 34 689999999998864
No 38
>PRK10314 putative acyltransferase; Provisional
Probab=99.33 E-value=8.4e-12 Score=115.35 Aligned_cols=121 Identities=15% Similarity=0.132 Sum_probs=88.0
Q ss_pred CCcCcHHHHHHHHHHhcCCCCCH--HHHHHHHhc-CCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccC
Q psy3403 385 KSELQMPDIIKLIQKDLSEPYSI--YTYRYFIHN-WPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRK 461 (511)
Q Consensus 385 lteeDle~L~eL~~~~f~~~~se--e~~e~~le~-~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRG 461 (511)
++.+++.++..+-...|...... ..+.. ... .....+++++++++||++.+...... ...++|+.++|+|+|||
T Consensus 12 l~~~~~~~~~~lR~~VF~~eq~~~~~e~D~-~d~~~~~~h~~~~~~~~~vg~~r~~~~~~~--~~~~~i~rv~V~~~~rG 88 (153)
T PRK10314 12 LSVSQLYALLQLRCAVFVVEQNCPYQDIDG-DDLTGDNRHILGWKNDELVAYARILKSDDD--LEPVVIGRVIVSEALRG 88 (153)
T ss_pred CCHHHHHHHHHHHHHHhhhhcCCCccccCC-CCCCCCcEEEEEEECCEEEEEEEEecCCCC--CCCEEEEEEEECHHHhC
Confidence 45566778888877777532211 11111 111 12456777889999999998763321 23578999999999999
Q ss_pred CcHHHHHHHHHHHHHHHC-CCCEEEEEEecCCHHHHHHHHHCCCEEeeEeC
Q psy3403 462 RKIGSNLVLKAIRAMVAD-DADEVVLETEITNRPALKLYENLGFVRDKRLF 511 (511)
Q Consensus 462 QGIGraLL~aLie~Are~-G~~rI~L~V~~~N~~AikFYEKlGFe~vG~Ly 511 (511)
+|||++||++++++++.. +...+.|.+ +..+++||+|+||+.++..|
T Consensus 89 ~GiG~~Lm~~~~~~~~~~~~~~~i~L~a---~~~a~~fY~k~GF~~~g~~f 136 (153)
T PRK10314 89 EKVGQQLMSKTLESCTRHWPDKPVYLGA---QAHLQNFYQSFGFIPVTEVY 136 (153)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCcEEEeh---HHHHHHHHHHCCCEECCCcc
Confidence 999999999999999874 677788876 36789999999999988654
No 39
>PRK10562 putative acetyltransferase; Provisional
Probab=99.31 E-value=4.3e-11 Score=107.58 Aligned_cols=116 Identities=17% Similarity=0.247 Sum_probs=84.8
Q ss_pred EcCCcCcHHHHHHHHHHhc--CCCCCHHH-HH---HHHh---cCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEE
Q psy3403 383 SYKSELQMPDIIKLIQKDL--SEPYSIYT-YR---YFIH---NWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAML 453 (511)
Q Consensus 383 r~lteeDle~L~eL~~~~f--~~~~see~-~e---~~le---~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~I 453 (511)
++++.+|++.+.+++.... ..++.... +. ..+. ......+++..+|++||++.+.. ...+..+
T Consensus 3 r~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~iG~~~~~~--------~~~i~~~ 74 (145)
T PRK10562 3 REYQPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYLPAAQTWVWEEDGKLLGFVSVLE--------GRFVGAL 74 (145)
T ss_pred ccccchhhHHHHHHHHHhccccCCCCCHHHHHHhHHHhhhhhcCcccEEEEEECCEEEEEEEEee--------ccEEEEE
Confidence 3477889999999987542 22322111 11 1111 12234567778899999998743 1357789
Q ss_pred EEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEeC
Q psy3403 454 AVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKRLF 511 (511)
Q Consensus 454 aV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~Ly 511 (511)
+|+|+|||+|+|++|++.+++. +..+.+.+...|.+|++||+|+||+.++..+
T Consensus 75 ~v~~~~rg~G~g~~ll~~~~~~-----~~~~~~~v~~~N~~s~~~y~k~Gf~~~~~~~ 127 (145)
T PRK10562 75 FVAPKAVRRGIGKALMQHVQQR-----YPHLSLEVYQKNQRAVNFYHAQGFRIVDSAW 127 (145)
T ss_pred EECHHHcCCCHHHHHHHHHHhh-----CCeEEEEEEcCChHHHHHHHHCCCEEccccc
Confidence 9999999999999999888774 4578899999999999999999999988653
No 40
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.31 E-value=1.5e-11 Score=131.31 Aligned_cols=118 Identities=15% Similarity=0.073 Sum_probs=91.4
Q ss_pred EEEEcCCcCcHHHHHHHHHHh----cCCCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEE
Q psy3403 380 KYVSYKSELQMPDIIKLIQKD----LSEPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAV 455 (511)
Q Consensus 380 ~irr~lteeDle~L~eL~~~~----f~~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV 455 (511)
.++ .++.+|++.+.+++... +..+++.+.+. .....++++.+++++||++.+..... ...++|..++|
T Consensus 296 ~IR-~at~~D~~~I~~L~~~~~~~~~~~~~~~~~l~----~~~~~~~va~~dg~iVG~~~~~~~~~---~~~~~I~~l~V 367 (441)
T PRK05279 296 QLR-RATIDDVGGILELIRPLEEQGILVRRSREQLE----REIDKFTVIERDGLIIGCAALYPFPE---EKMGEMACLAV 367 (441)
T ss_pred HeE-eCCHHHHHHHHHHHHHHHHcCCccccCHHHHh----cccCcEEEEEECCEEEEEEEEEEcCC---CCeEEEEEEEE
Confidence 344 47888999999987642 22334444333 23345788889999999997765332 24688999999
Q ss_pred ccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 456 DENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 456 ~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
+|+|||||+|++|+++++++++++|+..+.+.+ ..|++||+++||+..+.
T Consensus 368 ~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~----~~a~~fY~k~GF~~~g~ 417 (441)
T PRK05279 368 HPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT----TRTAHWFLERGFVPVDV 417 (441)
T ss_pred CHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec----chHHHHHHHCcCEECCh
Confidence 999999999999999999999999999887654 46899999999998875
No 41
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.30 E-value=4.9e-11 Score=107.11 Aligned_cols=124 Identities=18% Similarity=0.169 Sum_probs=92.0
Q ss_pred EcCCcCcHHHHHHHHHHh----c--C-CCCCHHHHHHHH----hcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEE
Q psy3403 383 SYKSELQMPDIIKLIQKD----L--S-EPYSIYTYRYFI----HNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIA 451 (511)
Q Consensus 383 r~lteeDle~L~eL~~~~----f--~-~~~see~~e~~l----e~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~ 451 (511)
++++++|++.+.++.... + . ...+.+....++ .......|++..+|++||++.+...... ...+.++
T Consensus 4 r~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~--~~~~~~g 81 (156)
T TIGR03585 4 TPLNSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQESRPIGVISFTDINLV--HKSAFWG 81 (156)
T ss_pred ccCCHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecChh--hCeEEEE
Confidence 346778888888875431 1 1 224433333332 2233457777889999999998654321 2345565
Q ss_pred EEEEccCccCCcHHHHHHHHHHHHHHH-CCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 452 MLAVDENYRKRKIGSNLVLKAIRAMVA-DDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 452 ~IaV~PeyRGQGIGraLL~aLie~Are-~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
+++.|.+| +|||++++..+++++++ .+++++.+.|.+.|.+|++||+|+||+.++..
T Consensus 82 -~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~Gf~~~g~~ 139 (156)
T TIGR03585 82 -IYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEKFGFEREGVF 139 (156)
T ss_pred -EEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHHcCCeEeeee
Confidence 45999999 99999999999999986 79999999999999999999999999998854
No 42
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.30 E-value=4.3e-11 Score=97.38 Aligned_cols=77 Identities=36% Similarity=0.502 Sum_probs=65.1
Q ss_pred cEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHH
Q psy3403 419 KFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKL 498 (511)
Q Consensus 419 ~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikF 498 (511)
...+++.+++++||++.+... ....+|..++|+|+|||+|||+.|++++.+.+. ...+++.+ +..+.+|
T Consensus 3 ~~~~~~~~~~~ivG~~~~~~~-----~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~---~~~i~l~~---~~~~~~f 71 (79)
T PF13508_consen 3 ERFFVAEDDGEIVGFIRLWPN-----EDFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAK---SKKIFLFT---NPAAIKF 71 (79)
T ss_dssp EEEEEEEETTEEEEEEEEEET-----TTEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHT---CSEEEEEE---EHHHHHH
T ss_pred cEEEEEEECCEEEEEEEEEEc-----CCEEEEEEEEECHHHcCCCHHHHHHHHHHHHcC---CCcEEEEE---cHHHHHH
Confidence 567889999999999999653 347899999999999999999999999988883 35677776 4789999
Q ss_pred HHHCCCEE
Q psy3403 499 YENLGFVR 506 (511)
Q Consensus 499 YEKlGFe~ 506 (511)
|+++||++
T Consensus 72 Y~~~GF~~ 79 (79)
T PF13508_consen 72 YEKLGFEE 79 (79)
T ss_dssp HHHTTEEE
T ss_pred HHHCcCCC
Confidence 99999985
No 43
>PRK09831 putative acyltransferase; Provisional
Probab=99.30 E-value=2.5e-11 Score=109.71 Aligned_cols=108 Identities=22% Similarity=0.306 Sum_probs=80.9
Q ss_pred EcCCcCcHHHHHHHHHHhcC----CCCCHHHHH-----------HHHhcCCcEEEEEEECCeEEEEEEEEEeccccccce
Q psy3403 383 SYKSELQMPDIIKLIQKDLS----EPYSIYTYR-----------YFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRR 447 (511)
Q Consensus 383 r~lteeDle~L~eL~~~~f~----~~~see~~e-----------~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~ 447 (511)
|.++++|++.+.+++...+. ..++.+... ..+. ...++++..+|++||++.+..
T Consensus 4 r~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~iiG~~~~~~--------- 72 (147)
T PRK09831 4 RNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLA--KSQVRVAVINAQPVGFITCIE--------- 72 (147)
T ss_pred ccCChhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHh--cCceEEEEECCEEEEEEEehh---------
Confidence 34788899999998776432 233433222 2222 345788889999999988742
Q ss_pred EEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 448 GYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 448 a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
.++..++|+|+|||+|||++|++++++.++. +.+. .+..|++||+|+||+.++.
T Consensus 73 ~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-------l~v~-~~~~a~~~Y~k~Gf~~~g~ 126 (147)
T PRK09831 73 HYIDMLFVDPEYTRRGVASALLKPLIKSESE-------LTVD-ASITAKPFFERYGFQTVKQ 126 (147)
T ss_pred ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-------eEee-cchhhHHHHHHCCCEEeec
Confidence 4678899999999999999999999998864 3333 3578999999999999876
No 44
>PLN02825 amino-acid N-acetyltransferase
Probab=99.29 E-value=2e-11 Score=133.12 Aligned_cols=118 Identities=12% Similarity=0.024 Sum_probs=94.7
Q ss_pred EEEcCCcCcHHHHHHHHHHhcC----CCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEc
Q psy3403 381 YVSYKSELQMPDIIKLIQKDLS----EPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVD 456 (511)
Q Consensus 381 irr~lteeDle~L~eL~~~~f~----~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~ 456 (511)
-+|.++.+|++.+.+|++.... ..++.+.+... ...+++++.+|++||++.+..... ...++|..++|+
T Consensus 369 ~IR~At~eDi~~I~~Li~~lee~g~lv~rs~e~le~e----i~~f~V~e~Dg~IVG~aal~~~~~---~~~aEI~~laV~ 441 (515)
T PLN02825 369 GTRMARVEDLAGIRQIIRPLEESGILVRRTDEELLRA----LDSFVVVEREGSIIACAALFPFFE---EKCGEVAAIAVS 441 (515)
T ss_pred hheeCCHHHHHHHHHHHHHHHHcCCCcCCCHHHHHhc----CCcEEEEEECCEEEEEEEEEeecC---CCcEEEEEEEEC
Confidence 3455899999999999976433 33444444433 345888889999999998765432 246889999999
Q ss_pred cCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 457 ENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 457 PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
|+|||+|+|++||++++++|+++|++++++.+ +.+.+||+++||+..+.
T Consensus 442 P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Llt----t~a~~fY~k~GF~~~~~ 490 (515)
T PLN02825 442 PECRGQGQGDKLLDYIEKKAASLGLEKLFLLT----TRTADWFVRRGFSECSI 490 (515)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEe----CcHHHHHHHCCCEEeCh
Confidence 99999999999999999999999999999987 35789999999998753
No 45
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.26 E-value=4.2e-11 Score=133.22 Aligned_cols=120 Identities=15% Similarity=0.087 Sum_probs=93.1
Q ss_pred ccceEEEEcCCcCcHHHHHHHHHHhcC----CCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEE
Q psy3403 376 IGGIKYVSYKSELQMPDIIKLIQKDLS----EPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIA 451 (511)
Q Consensus 376 ~~~i~irr~lteeDle~L~eL~~~~f~----~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~ 451 (511)
+.++.+++ .+.+|++.+.++....+. .++..+.+. .....++++.++|++||++.+.... ...++|.
T Consensus 461 ~~gm~IR~-a~~~D~~~I~~L~~~~~~~~~~~~~~~~~l~----~~~~~~~Va~~~g~IVG~~~l~~~~----~~~~~I~ 531 (614)
T PRK12308 461 TSGVKVRP-ARLTDIDAIEGMVAYWAGLGENLPRSRNELV----RDIGSFAVAEHHGEVTGCASLYIYD----SGLAEIR 531 (614)
T ss_pred CCCCEEEE-CCHHHHHHHHHHHHHHHhhhcccccCHHHHh----cccCcEEEEEECCEEEEEEEEEEcC----CCeEEEE
Confidence 34577766 788899999999865432 233333222 2334578888999999999886532 2357899
Q ss_pred EEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 452 MLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 452 ~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
.++|+|+|||||||+.|++.+++++++.|++++++.+ .+.+||+|+||+..+.
T Consensus 532 ~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~-----~a~~FYek~GF~~~~~ 584 (614)
T PRK12308 532 SLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLT-----RVPEFFMKQGFSPTSK 584 (614)
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEee-----CcHHHHHHCCCEECCc
Confidence 9999999999999999999999999999999998865 2479999999998765
No 46
>PRK01346 hypothetical protein; Provisional
Probab=99.24 E-value=1.3e-10 Score=122.17 Aligned_cols=127 Identities=14% Similarity=0.113 Sum_probs=97.2
Q ss_pred cceEEEEcCCcCcHHHHHHHHHHhcCCCCCHHHHHHHHh-cCCcEEEEEEECCeEEEEEEEEEecc----ccccceEEEE
Q psy3403 377 GGIKYVSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIH-NWPKFCFLAMDEQKCVGAIVCKLDIH----RKVIRRGYIA 451 (511)
Q Consensus 377 ~~i~irr~lteeDle~L~eL~~~~f~~~~see~~e~~le-~~~~~~fVA~ddGeLVG~a~l~~~~~----~~~~~~a~I~ 451 (511)
..+.+++ ++++|++++.+++..+|....+.+.+..+.. ......++++++|++||++.+..... ....+.++|.
T Consensus 5 ~~~~iR~-~~~~D~~~i~~L~~~~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~ 83 (411)
T PRK01346 5 MAITIRT-ATEEDWPAWFRAAATGFGDSPSDEELEAWRALVEPDRTLGAFDGDEVVGTAGAFDLRLTVPGGAVLPAAGVT 83 (411)
T ss_pred CCceeec-CCHHHHHHHHHHHHHHcCCCCChHHHHHHHHhcCcCCeEEEEECCEEEEEEEEeccccccCCCCccceeEEE
Confidence 3456665 6888999999999999886555544444332 12345688889999999998754321 1122568899
Q ss_pred EEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 452 MLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 452 ~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
.++|+|+|||||||++||+++++.+++.|+..+.|.+.. ..||+|+||+....
T Consensus 84 ~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~~-----~~~Y~r~Gf~~~~~ 136 (411)
T PRK01346 84 AVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTASE-----GGIYGRFGYGPATY 136 (411)
T ss_pred EEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECCc-----hhhHhhCCCeeccc
Confidence 999999999999999999999999999999888887542 47999999997654
No 47
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.21 E-value=8.3e-11 Score=109.64 Aligned_cols=115 Identities=18% Similarity=0.183 Sum_probs=93.9
Q ss_pred EcCCcCcHHHHHHHHHHhcCC----CCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccC
Q psy3403 383 SYKSELQMPDIIKLIQKDLSE----PYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDEN 458 (511)
Q Consensus 383 r~lteeDle~L~eL~~~~f~~----~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~Pe 458 (511)
|.++..|++.+.++....... +-+.+.+...+ ..+++++.+|.+||.+.+....+ .+.++|..++|+|+
T Consensus 4 R~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~~i----~dF~i~E~~g~viGC~aL~~~~~---~~~gE~~~laV~pd 76 (153)
T COG1246 4 RKARISDIPAILELIRPLELQGILLRRSREQLEEEI----DDFTIIERDGKVIGCAALHPVLE---EDLGELRSLAVHPD 76 (153)
T ss_pred eeccccchHHHHHHHHHHhhccccchhhHHHHHHHH----hhheeeeeCCcEEEEEeecccCc---cCeeeEEEEEECHH
Confidence 347888999999999875442 22334444444 34778888999999999985333 36899999999999
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEee
Q psy3403 459 YRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDK 508 (511)
Q Consensus 459 yRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG 508 (511)
|||+|+|..|+.+++..|++.|++++++-+. .+..||+++||+...
T Consensus 77 ~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt----~~~~~F~~~GF~~vd 122 (153)
T COG1246 77 YRGSGRGERLLERLLADARELGIKELFVLTT----RSPEFFAERGFTRVD 122 (153)
T ss_pred hcCCCcHHHHHHHHHHHHHHcCCceeeeeec----ccHHHHHHcCCeECc
Confidence 9999999999999999999999999998873 578999999999864
No 48
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.21 E-value=4.3e-10 Score=98.83 Aligned_cols=123 Identities=15% Similarity=0.188 Sum_probs=88.8
Q ss_pred eEEEEcCCcCcHHHHHHHHHH----hc---CCC-CCHHHHHHHHhc----C---CcEEEEEEE--CCeEEEEEEEEEecc
Q psy3403 379 IKYVSYKSELQMPDIIKLIQK----DL---SEP-YSIYTYRYFIHN----W---PKFCFLAMD--EQKCVGAIVCKLDIH 441 (511)
Q Consensus 379 i~irr~lteeDle~L~eL~~~----~f---~~~-~see~~e~~le~----~---~~~~fVA~d--dGeLVG~a~l~~~~~ 441 (511)
+.+++ ++++|++.+.++... .+ ... ++.+....++.. + ....|++.+ ++++||++.+.....
T Consensus 2 l~lr~-~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~~ 80 (142)
T PF13302_consen 2 LTLRP-LTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNIDK 80 (142)
T ss_dssp EEEEE--HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEET
T ss_pred EEEEc-CCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeeccc
Confidence 34554 788899999999852 11 112 255554444321 1 133455555 357999999943321
Q ss_pred ccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHH-HCCCCEEEEEEecCCHHHHHHHHHCCCE
Q psy3403 442 RKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMV-ADDADEVVLETEITNRPALKLYENLGFV 505 (511)
Q Consensus 442 ~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Ar-e~G~~rI~L~V~~~N~~AikFYEKlGFe 505 (511)
....++|+ +.|.|+|||+|+|++++..++++++ ..|+.++.+.+.+.|.+|+++++|+||+
T Consensus 81 --~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 81 --NNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEKLGFE 142 (142)
T ss_dssp --TTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHHTT-E
T ss_pred --CCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHHcCCC
Confidence 24678888 8999999999999999999999996 5899999999999999999999999996
No 49
>KOG3234|consensus
Probab=99.19 E-value=1.4e-11 Score=114.88 Aligned_cols=100 Identities=11% Similarity=0.153 Sum_probs=85.0
Q ss_pred ChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeEEEE--eCCeEEEEEEeecccC--CccceE--Eecc------ChhhHH
Q psy3403 15 QMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLM--DQLKTINIIENDTATQ--SIRSAL--NNTT------LVPSNL 82 (511)
Q Consensus 15 dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~~~A--~~g~~vG~i~~~~~~~--~~rghi--v~~a------gig~~L 82 (511)
||-..-.++-..|+|-|++.+|-+.+..||++|++| -+|.+-||||+++++. .|-||| +++| |+|+.|
T Consensus 11 Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~Rrl~la~~l 90 (173)
T KOG3234|consen 11 DLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEAPTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYRRLGLAAKL 90 (173)
T ss_pred HHHhhccccccccccccceehhHHHHHhChHHhEeccCCCCceEEEEeeeccccCcceeeEEEEEEechhHHHHHHHHHH
Confidence 455555677888999999999999999999999999 5789999999999533 568999 5555 999999
Q ss_pred HHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 83 NSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 83 ~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
|.... .+...++--|-|=||+||+.||.+|-.
T Consensus 91 m~~led~~d~~~a~fvDLfVr~sN~iAI~mYkk 123 (173)
T KOG3234|consen 91 MDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKK 123 (173)
T ss_pred HHHHHHHHHhhhhheeeeeeeccchhHHHHHHh
Confidence 99888 444477888889999999999999953
No 50
>KOG3235|consensus
Probab=99.17 E-value=1e-10 Score=109.40 Aligned_cols=124 Identities=31% Similarity=0.478 Sum_probs=101.8
Q ss_pred CCcCcHHHHHHHHHHhcCCCCCHHHHHHHHhcCCcEEEEEEE-CCeEEEEEEEEEecccc-ccceEEEEEEEEccCccCC
Q psy3403 385 KSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLAMD-EQKCVGAIVCKLDIHRK-VIRRGYIAMLAVDENYRKR 462 (511)
Q Consensus 385 lteeDle~L~eL~~~~f~~~~see~~e~~le~~~~~~fVA~d-dGeLVG~a~l~~~~~~~-~~~~a~I~~IaV~PeyRGQ 462 (511)
++.+|+-.+...-..+.++.|....+....-.|+...|||.+ +|++||++...+..... ..+.++|.+++|...||++
T Consensus 7 ar~~DL~~mQ~~Nl~~lpENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs~Rrl 86 (193)
T KOG3235|consen 7 ARPDDLLEMQHCNLLNLPENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRSYRRL 86 (193)
T ss_pred CCHHHHHHhhhcccccCcHHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehhhHHHh
Confidence 555555555544445667777777777777889999999994 79999999887655322 3357999999999999999
Q ss_pred cHHHHHHHHHHHHHHH-CCCCEEEEEEecCCHHHHHHHH-HCCCEEee
Q psy3403 463 KIGSNLVLKAIRAMVA-DDADEVVLETEITNRPALKLYE-NLGFVRDK 508 (511)
Q Consensus 463 GIGraLL~aLie~Are-~G~~rI~L~V~~~N~~AikFYE-KlGFe~vG 508 (511)
|||++||....+...+ .+++.|.|+|...|.+|+.+|+ .+||++.+
T Consensus 87 Gla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl~F~v~e 134 (193)
T KOG3235|consen 87 GLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTLGFVVCE 134 (193)
T ss_pred hHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhhccceEEee
Confidence 9999999998888877 6888999999999999999999 89999865
No 51
>KOG2488|consensus
Probab=99.13 E-value=3.7e-10 Score=108.28 Aligned_cols=120 Identities=21% Similarity=0.224 Sum_probs=97.9
Q ss_pred CcHHHHHHHHHHhcC-----CC--CCHHHHHHHHhcCCcEEEEEEECC-eEEEEEEEEEeccccccceEEEEEEEEccCc
Q psy3403 388 LQMPDIIKLIQKDLS-----EP--YSIYTYRYFIHNWPKFCFLAMDEQ-KCVGAIVCKLDIHRKVIRRGYIAMLAVDENY 459 (511)
Q Consensus 388 eDle~L~eL~~~~f~-----~~--~see~~e~~le~~~~~~fVA~ddG-eLVG~a~l~~~~~~~~~~~a~I~~IaV~Pey 459 (511)
++++....|...... .+ |.+..-...+......++++++++ ++|||..+.+.... ..+..++..+-|+++|
T Consensus 54 ~~ldw~f~L~k~nm~~~Y~qs~~Gw~~~~K~~El~~~~~~Yi~a~~~~~~~vgf~~Frf~vd~-g~~vlYcyEvqv~~~y 132 (202)
T KOG2488|consen 54 EDLDWCFSLFKKNMGAMYRQSSWGWDDNSKAKELRNRKLRYICAWNNKSKLVGFTMFRFTVDT-GDPVLYCYEVQVASAY 132 (202)
T ss_pred HHHHHHHHHHHhhhHHHhhhcccccCchhHHHHHhhccceEEEEEcCCCceeeEEEEEEEccc-CCeEEEEEEEeehhhh
Confidence 567777777665322 33 444444455666677888998876 89999999887665 4568899999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEee
Q psy3403 460 RKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDK 508 (511)
Q Consensus 460 RGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG 508 (511)
||+|||+.||+.+...+.....++|+|.|...|.+|+.||+++||.+..
T Consensus 133 R~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~~gf~~~~ 181 (202)
T KOG2488|consen 133 RGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYHRLGFVVDE 181 (202)
T ss_pred hccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHHHcCcccCC
Confidence 9999999999999999998888899999999999999999999998753
No 52
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.09 E-value=1.4e-09 Score=103.47 Aligned_cols=120 Identities=23% Similarity=0.276 Sum_probs=94.7
Q ss_pred EEcCCcCcHHHHHHHHHHhcCCCCCHHHHHHHHhc----CCcEEEEEEECCeEEEEEEEEEeccc-cccceEEEEEEEEc
Q psy3403 382 VSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHN----WPKFCFLAMDEQKCVGAIVCKLDIHR-KVIRRGYIAMLAVD 456 (511)
Q Consensus 382 rr~lteeDle~L~eL~~~~f~~~~see~~e~~le~----~~~~~fVA~ddGeLVG~a~l~~~~~~-~~~~~a~I~~IaV~ 456 (511)
++..++.|+..+.++....|. +..+...-..++. .....+||.++|++||.+.++...-. ......-+..++|+
T Consensus 6 ir~e~~~d~~~i~~~~~~aF~-~~~e~~~v~~lR~~~~~~~~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaPLaV~ 84 (171)
T COG3153 6 IRTETPADIPAIEALTREAFG-PGREAKLVDKLREGGRPDLTLSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAPLAVD 84 (171)
T ss_pred EEecChhhHHHHHHHHHHHhh-cchHHHHHHHHHhcCCcccceeEEEeeCCEEEEEEEEeEEEecCcccceEEEEeEEEc
Confidence 445788999999999999987 4444444444432 35778999999999999998754322 22344567899999
Q ss_pred cCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEee
Q psy3403 457 ENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDK 508 (511)
Q Consensus 457 PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG 508 (511)
|+|||||||++|++..++.++..|+..+++.-+ ..+|.|+||+...
T Consensus 85 p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlGd------p~YY~rfGF~~~~ 130 (171)
T COG3153 85 PEYQGQGIGSALVREGLEALRLAGASAVVVLGD------PTYYSRFGFEPAA 130 (171)
T ss_pred hhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecC------cccccccCcEEcc
Confidence 999999999999999999999999998887543 5789999999764
No 53
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.04 E-value=2.9e-09 Score=89.86 Aligned_cols=63 Identities=27% Similarity=0.387 Sum_probs=54.6
Q ss_pred eEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 447 RGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 447 ~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
.+.|..++|+|+|||||+|+.|+.++.+.+.+.|. ..++.+...|.+|++||+|+||+.....
T Consensus 21 ~g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~-~~~l~v~~~N~~s~~ly~klGf~~~~~~ 83 (86)
T PF08445_consen 21 DGEIGGVYTLPEHRRRGLGSALVAALARELLERGK-TPFLYVDADNEASIRLYEKLGFREIEEE 83 (86)
T ss_dssp TCCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTS-EEEEEEETT-HHHHHHHHHCT-EEEEEE
T ss_pred CcEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCC-cEEEEEECCCHHHHHHHHHcCCEEEEEE
Confidence 37799999999999999999999999999999877 4789999999999999999999998653
No 54
>PRK13688 hypothetical protein; Provisional
Probab=99.02 E-value=2.5e-09 Score=99.98 Aligned_cols=106 Identities=14% Similarity=0.038 Sum_probs=73.5
Q ss_pred cCCcCcHHHHHHHHHHhcCCCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEecc------ccccceEEEEEEEEcc
Q psy3403 384 YKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIH------RKVIRRGYIAMLAVDE 457 (511)
Q Consensus 384 ~lteeDle~L~eL~~~~f~~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~------~~~~~~a~I~~IaV~P 457 (511)
.+...|+.++.++....|.. .....++++++++++||++.+..... ......++|..++|+|
T Consensus 22 ~~~~~dl~~l~~l~~~~f~~------------~~~~~~~~~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p 89 (156)
T PRK13688 22 EFGNQELSMLEELQANIIEN------------DSESPFYGIYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVLP 89 (156)
T ss_pred HhcHHHHHHHHhhhhhEeec------------CCCCCEEEEEECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEECH
Confidence 35555666776666655521 12355678889999999987643211 0123557899999999
Q ss_pred CccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 458 NYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 458 eyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
+|||||||++|++.+ ++.++. + .+...| .|++||+|+||+..+.
T Consensus 90 ~~rgkGiG~~Ll~~a----~~~~~~-~--~~~~~~-~a~~FY~k~GF~~~~~ 133 (156)
T PRK13688 90 KYQNRGYGEMLVDFA----KSFQLP-I--KTIARN-KSKDFWLKLGFTPVEY 133 (156)
T ss_pred HHcCCCHHHHHHHHH----HHhCCe-E--EEEecc-chHHHHHhCCCEEeEE
Confidence 999999999999754 444443 3 344455 5889999999998875
No 55
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.01 E-value=1.7e-09 Score=111.05 Aligned_cols=77 Identities=16% Similarity=0.132 Sum_probs=66.3
Q ss_pred EEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHH
Q psy3403 420 FCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLY 499 (511)
Q Consensus 420 ~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFY 499 (511)
.+++..++|++||++.+.. .+|..++|+|+|||+|||++||+++++++++.|+.+++|.+... +.+||
T Consensus 7 ~~~v~~~~~~iVG~~~l~~---------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~---~~~fY 74 (297)
T cd02169 7 TVGIFDDAGELIATGSIAG---------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPK---NAKFF 74 (297)
T ss_pred EEEEEEECCEEEEEEEecc---------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEccc---HHHHH
Confidence 3445556799999987742 35889999999999999999999999999999999999998744 47999
Q ss_pred HHCCCEEee
Q psy3403 500 ENLGFVRDK 508 (511)
Q Consensus 500 EKlGFe~vG 508 (511)
+|+||+..+
T Consensus 75 ek~GF~~~~ 83 (297)
T cd02169 75 RGLGFKELA 83 (297)
T ss_pred HHCCCEEec
Confidence 999999887
No 56
>KOG3138|consensus
Probab=98.98 E-value=1.5e-09 Score=104.48 Aligned_cols=128 Identities=26% Similarity=0.317 Sum_probs=100.1
Q ss_pred EEcCCcCcHHHHHHHHHHhcCCCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccc------cceEEEEEEEE
Q psy3403 382 VSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKV------IRRGYIAMLAV 455 (511)
Q Consensus 382 rr~lteeDle~L~eL~~~~f~~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~------~~~a~I~~IaV 455 (511)
.+..++.++..+..+....|+..|....+...+.. .+..=+|..++..||............ ...++|..++|
T Consensus 19 l~~it~~nl~~~~~l~~~~fP~~y~~kfy~~~~~~-~~~~~~A~~~~~~v~a~~~k~~~~~~~~~r~~~~~~~yi~~Lgv 97 (187)
T KOG3138|consen 19 LRLITPNNLKQLKQLNEDIFPISYVDKFYPDVLSN-GDLTQLAYYNEIAVGAVACKLIKFVQNAKRLFGNRVIYILSLGV 97 (187)
T ss_pred eccCCcchHHHHHHHhccccCcchHHHHHHHHHhc-CCHHHhhhhccccccceeeeehhhhhhhhhhhccceeEEEeecc
Confidence 34578899999999999999988887766555543 333334444555666665544332211 11488999999
Q ss_pred ccCccCCcHHHHHHHHHHHHHHHCC-CCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 456 DENYRKRKIGSNLVLKAIRAMVADD-ADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 456 ~PeyRGQGIGraLL~aLie~Are~G-~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
.|.||.+|||+.|+..+.+++.... ++.++|++...|..|+.||++.||+.++++
T Consensus 98 l~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~ 153 (187)
T KOG3138|consen 98 LPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERL 153 (187)
T ss_pred cHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEeecc
Confidence 9999999999999999999999876 889999999999999999999999998764
No 57
>KOG3234|consensus
Probab=98.95 E-value=2.3e-09 Score=100.22 Aligned_cols=125 Identities=20% Similarity=0.314 Sum_probs=97.9
Q ss_pred CCcCcHHHHHHHHHHhcCCCCCHHHHHHHHhcCCcEEEEEEE-CCeEEEEEEEEEeccccccceEEEEEEEEccCccCCc
Q psy3403 385 KSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLAMD-EQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRK 463 (511)
Q Consensus 385 lteeDle~L~eL~~~~f~~~~see~~e~~le~~~~~~fVA~d-dGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQG 463 (511)
...+|+-.+-.+.-+...+.++.......+..+++.++++.. ++++.|++........ ..-.+++..+.|.|+||+.|
T Consensus 7 f~~~Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~p~~~imgyimgk~Eg~~-~~wh~HvTAltVap~~Rrl~ 85 (173)
T KOG3234|consen 7 FTPQDLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEAPTGEIMGYIMGKVEGKD-TEWHGHVTALTVAPDYRRLG 85 (173)
T ss_pred ccHHHHHhhccccccccccccceehhHHHHHhChHHhEeccCCCCceEEEEeeeccccC-cceeeEEEEEEechhHHHHH
Confidence 444455544444444444566666666667778888888875 5789999998765533 22348899999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 464 IGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 464 IGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
+|+.||..+.+.....+.--+.|.|...|+.|+.||+++||..-+++
T Consensus 86 la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkLGY~~YR~V 132 (173)
T KOG3234|consen 86 LAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKLGYSVYRTV 132 (173)
T ss_pred HHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHhcCceEEEee
Confidence 99999999999998887888999999999999999999999987654
No 58
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=98.94 E-value=7.2e-09 Score=93.89 Aligned_cols=82 Identities=15% Similarity=0.155 Sum_probs=69.9
Q ss_pred CeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHH-CCCCEEEEEEecCCHHHHHHHHHCCCEE
Q psy3403 428 QKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVA-DDADEVVLETEITNRPALKLYENLGFVR 506 (511)
Q Consensus 428 GeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are-~G~~rI~L~V~~~N~~AikFYEKlGFe~ 506 (511)
+++||.+.+...........++|+ +.+.|+|||+|+|++++.++++++++ .++.++.+.+.+.|.+++++++|+||+.
T Consensus 77 ~~~iG~~~~~~~~~~~~~~~~~ig-~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~Gf~~ 155 (187)
T COG1670 77 GELIGVIGLSDIDRAANGDLAEIG-YWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKLGFRL 155 (187)
T ss_pred CeEEEEEEEEEeccccccceEEEE-EEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHcCChh
Confidence 489999999765421123456666 67799999999999999999999998 8999999999999999999999999999
Q ss_pred eeEe
Q psy3403 507 DKRL 510 (511)
Q Consensus 507 vG~L 510 (511)
++..
T Consensus 156 eg~~ 159 (187)
T COG1670 156 EGEL 159 (187)
T ss_pred hhhh
Confidence 8753
No 59
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.85 E-value=2.1e-08 Score=104.43 Aligned_cols=80 Identities=15% Similarity=0.137 Sum_probs=70.1
Q ss_pred CcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHH
Q psy3403 418 PKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALK 497 (511)
Q Consensus 418 ~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~Aik 497 (511)
.+.+++++++|++||++.+.. ..|..++|+|+|||+|+|+.||.++++++++.|+..+++.+.+.+ .+
T Consensus 30 ~d~~vv~~~~~~lVg~g~l~g---------~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~---~~ 97 (332)
T TIGR00124 30 LEIFIAVYEDEEIIGCGGIAG---------NVIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEY---AA 97 (332)
T ss_pred CCEEEEEEECCEEEEEEEEec---------CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchH---HH
Confidence 367788889999999998742 247899999999999999999999999999999999999997655 67
Q ss_pred HHHHCCCEEeeE
Q psy3403 498 LYENLGFVRDKR 509 (511)
Q Consensus 498 FYEKlGFe~vG~ 509 (511)
||+++||...+.
T Consensus 98 fy~klGF~~i~~ 109 (332)
T TIGR00124 98 LFEYCGFKTLAE 109 (332)
T ss_pred HHHHcCCEEeee
Confidence 999999998764
No 60
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=98.84 E-value=2.2e-08 Score=88.75 Aligned_cols=111 Identities=7% Similarity=0.052 Sum_probs=82.8
Q ss_pred CceEEEeCCCCCChhHHHHHHhhhCCCCccHHH----HHHHHHhCCCeEEEE-eCCeEEEEEEeecc----cCCccceEE
Q psy3403 3 GGIKYVSYKSELQMPDIIKLIQKDLSEPYSIYT----YRYFIHNWPKFCFLM-DQLKTINIIENDTA----TQSIRSALN 73 (511)
Q Consensus 3 ~~i~y~~~~~e~dl~~I~~l~~~~LsEpYsi~~----yryfl~~wP~l~~~A-~~g~~vG~i~~~~~----~~~~rghiv 73 (511)
..+..++. ..+|++.|.+|+....++++..-. |.-.+......+||| .+|++||+|.-... ...+.++|.
T Consensus 2 ~~~~ir~a-~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~ 80 (144)
T PRK10146 2 PACELRPA-TQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQ 80 (144)
T ss_pred CccEEeeC-cHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccchhheeh
Confidence 35667776 568999999998866665544222 233333434567788 89999999987652 123346674
Q ss_pred ecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 74 NTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 74 ~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
.+. |||+.|+..++ ..++.|+..+.|++.++|.+|++||.+
T Consensus 81 ~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~~ 130 (144)
T PRK10146 81 ELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLR 130 (144)
T ss_pred eeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHH
Confidence 444 99999999999 788899999999999999999999975
No 61
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=98.81 E-value=3.8e-08 Score=84.69 Aligned_cols=98 Identities=10% Similarity=0.101 Sum_probs=81.8
Q ss_pred ChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeEEEE-eCCeEEEEEEeecccCCccceEEecc--------ChhhHHHHh
Q psy3403 15 QMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLM-DQLKTINIIENDTATQSIRSALNNTT--------LVPSNLNSE 85 (511)
Q Consensus 15 dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a--------gig~~L~~~ 85 (511)
|+++|++|....+++|++...|...+..-+..++++ .+|++||++....... .++|..++ |+|++|+..
T Consensus 1 d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~--~~~i~~~~v~~~~rg~G~g~~ll~~ 78 (131)
T TIGR01575 1 DLKAVLEIEAAAFAFPWTEAQFAEELANYHLCYLLARIGGKVVGYAGVQIVLD--EAHILNIAVKPEYQGQGIGRALLRE 78 (131)
T ss_pred CHHHHHHHHHhhCCCCCCHHHHHHHhcCCCceEEEEecCCeEEEEEEEEecCC--CeEEEEEEECHHHcCCCHHHHHHHH
Confidence 688999999999999999988888886544455556 5899999999776222 35665555 999999999
Q ss_pred hh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 86 SK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 86 ~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
++ .+++.|+..++++|...|.+|++||-.
T Consensus 79 ~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~ 108 (131)
T TIGR01575 79 LIDEAKGRGVNEIFLEVRVSNIAAQALYKK 108 (131)
T ss_pred HHHHHHHcCCCeEEEEEecccHHHHHHHHH
Confidence 99 888899999999999999999999964
No 62
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=98.75 E-value=6.9e-08 Score=97.08 Aligned_cols=90 Identities=16% Similarity=0.138 Sum_probs=76.0
Q ss_pred hcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHH
Q psy3403 415 HNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRP 494 (511)
Q Consensus 415 e~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~ 494 (511)
.......+..+.+|++|+.+...... ...+.|..++++|+|||||+|++|+..+-....+.|. +..|.+..+|+.
T Consensus 173 a~g~~~~~f~~~d~~iVa~A~t~a~~----~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk-~~~L~~~~~N~~ 247 (268)
T COG3393 173 ALGRSRTYFLEGDGKIVAKAETAAEN----PAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGK-IPCLFVNSDNPV 247 (268)
T ss_pred HhhceeEEEEccCCcEEEeeeccccC----CcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCC-eeEEEEecCCHH
Confidence 33344555556677999999876543 4579999999999999999999999999999999887 478888899999
Q ss_pred HHHHHHHCCCEEeeE
Q psy3403 495 ALKLYENLGFVRDKR 509 (511)
Q Consensus 495 AikFYEKlGFe~vG~ 509 (511)
|.+.|+|.||+..|.
T Consensus 248 A~~iY~riGF~~~g~ 262 (268)
T COG3393 248 ARRIYQRIGFREIGE 262 (268)
T ss_pred HHHHHHHhCCeecce
Confidence 999999999999884
No 63
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=98.65 E-value=1.7e-07 Score=103.39 Aligned_cols=112 Identities=13% Similarity=0.050 Sum_probs=90.6
Q ss_pred CceEEEeCCCCCChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeEEEEe---CCeEEEEEEeeccc-----CCccceEEe
Q psy3403 3 GGIKYVSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLMD---QLKTINIIENDTAT-----QSIRSALNN 74 (511)
Q Consensus 3 ~~i~y~~~~~e~dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~~~A~---~g~~vG~i~~~~~~-----~~~rghiv~ 74 (511)
.+++.+++.+..|++.|.+|.......|++.-.++..+......+|||. +|++|||+++.... ....++|..
T Consensus 81 ~g~~IR~~~~~~D~~~I~~L~~~~~~~p~~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i~~ 160 (547)
T TIGR03103 81 RGFTVRRLRGPADVDAINRLYAARGMVPVRVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSLWC 160 (547)
T ss_pred CCcEEEeCCChhHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEEEE
Confidence 4688899988899999999999987777776666666655556788883 59999999864311 112467766
Q ss_pred cc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 75 TT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 75 ~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
++ |||++||..++ .+++.|+..++|+|..+|++|++||-.
T Consensus 161 l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~k 209 (547)
T TIGR03103 161 LAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYEK 209 (547)
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHH
Confidence 65 99999999999 899999999999999999999999964
No 64
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.61 E-value=2.6e-07 Score=101.49 Aligned_cols=90 Identities=18% Similarity=0.320 Sum_probs=71.2
Q ss_pred CcEEEEEEE---CCeEEEEEEEEEeccc----cccceEEEEEEEE-----------ccCccCCcHHHHHHHHHHHHHHHC
Q psy3403 418 PKFCFLAMD---EQKCVGAIVCKLDIHR----KVIRRGYIAMLAV-----------DENYRKRKIGSNLVLKAIRAMVAD 479 (511)
Q Consensus 418 ~~~~fVA~d---dGeLVG~a~l~~~~~~----~~~~~a~I~~IaV-----------~PeyRGQGIGraLL~aLie~Are~ 479 (511)
+...|+.+. ++.+||++.+...... .....++|..+.| +|+|||+|+|++||++++++|++.
T Consensus 410 G~e~F~~y~~~~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~ 489 (522)
T TIGR01211 410 GTEFFLSYEDPKNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEE 489 (522)
T ss_pred CCeEEEEEEcCCCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHC
Confidence 345666665 5789999999875431 1223566766664 499999999999999999999999
Q ss_pred CCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 480 DADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 480 G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
|+.++.+.. |..|++||+|+||+..+..
T Consensus 490 G~~~i~v~s---~~~A~~FY~klGf~~~g~y 517 (522)
T TIGR01211 490 GSEKILVIS---GIGVREYYRKLGYELDGPY 517 (522)
T ss_pred CCCEEEEee---CchHHHHHHHCCCEEEcce
Confidence 999998743 6899999999999988753
No 65
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=98.58 E-value=5.5e-07 Score=85.55 Aligned_cols=90 Identities=16% Similarity=0.222 Sum_probs=74.0
Q ss_pred EEEEEE-ECCeEEEEEEEEEecccc-ccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHH
Q psy3403 420 FCFLAM-DEQKCVGAIVCKLDIHRK-VIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALK 497 (511)
Q Consensus 420 ~~fVA~-ddGeLVG~a~l~~~~~~~-~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~Aik 497 (511)
..|+++ .++++||++.+...-... ...-++|+ ..|.|..||+|+|++|++.+++.|++.|+++|.+.++.+|.++++
T Consensus 69 ~~y~~v~~d~~ivG~i~lRh~Ln~~ll~~gGHIG-Y~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrk 147 (174)
T COG3981 69 STYWAVDEDGQIVGFINLRHQLNDFLLEEGGHIG-YSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRK 147 (174)
T ss_pred eeEEEEecCCcEEEEEEeeeecchHHHhcCCccc-ceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhH
Confidence 344454 469999999986533321 11246677 899999999999999999999999999999999999999999999
Q ss_pred HHHHCCCEEeeEe
Q psy3403 498 LYENLGFVRDKRL 510 (511)
Q Consensus 498 FYEKlGFe~vG~L 510 (511)
.-+++|=+.+.++
T Consensus 148 vI~~NGGile~~~ 160 (174)
T COG3981 148 VIEANGGILENEF 160 (174)
T ss_pred HHHhcCCEEeEEE
Confidence 9999998776654
No 66
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.55 E-value=2.9e-07 Score=85.37 Aligned_cols=85 Identities=19% Similarity=0.198 Sum_probs=68.6
Q ss_pred EEEEE-CCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCC-CCEEEEEEecCCHHHHHHH
Q psy3403 422 FLAMD-EQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADD-ADEVVLETEITNRPALKLY 499 (511)
Q Consensus 422 fVA~d-dGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G-~~rI~L~V~~~N~~AikFY 499 (511)
+..+. +|++|+++.+...... .....|+.+.|.|++||+|+|++||..+++.+.+.. -+.+.|... ...+.||
T Consensus 52 l~~~~~~g~LvAyaRLl~~~~~--~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQ---ahLq~fY 126 (155)
T COG2153 52 LLGWTPDGELVAYARLLPPGAE--YEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQ---AHLQDFY 126 (155)
T ss_pred EEEEcCCCeEEEEEecCCCCCC--cCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehH---HHHHHHH
Confidence 44444 9999999999765433 233779999999999999999999999999998754 445666654 6789999
Q ss_pred HHCCCEEeeEeC
Q psy3403 500 ENLGFVRDKRLF 511 (511)
Q Consensus 500 EKlGFe~vG~Ly 511 (511)
.++||++.+..|
T Consensus 127 a~~GFv~~~e~y 138 (155)
T COG2153 127 ASFGFVRVGEEY 138 (155)
T ss_pred HHhCcEEcCchh
Confidence 999999988765
No 67
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.54 E-value=5.7e-07 Score=66.11 Aligned_cols=63 Identities=30% Similarity=0.282 Sum_probs=54.1
Q ss_pred EEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEE
Q psy3403 422 FLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVL 486 (511)
Q Consensus 422 fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L 486 (511)
+++..++++||++.+..... ....+++..++|+|+|||+|+|++|+..+++++++.|+..+.+
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~--~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGS--GGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred EEEecCCEEEEEEEEEecCC--CCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 45667899999999877542 2356889999999999999999999999999999999988776
No 68
>PRK03624 putative acetyltransferase; Provisional
Probab=98.52 E-value=1.2e-06 Score=76.01 Aligned_cols=107 Identities=9% Similarity=0.115 Sum_probs=80.1
Q ss_pred ceEEEeCCCCCChhHHHHHHhhh-CCCCc--cHHHHHHHHHhCCCeEEEE-eCCeEEEEEEeecccCCccceEEecc---
Q psy3403 4 GIKYVSYKSELQMPDIIKLIQKD-LSEPY--SIYTYRYFIHNWPKFCFLM-DQLKTINIIENDTATQSIRSALNNTT--- 76 (511)
Q Consensus 4 ~i~y~~~~~e~dl~~I~~l~~~~-LsEpY--si~~yryfl~~wP~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a--- 76 (511)
.+.+++.. .+|++.|.+|.... +..|| +...++..+...+..+|+| .+|++||+++.... +..+++..++
T Consensus 2 ~~~ir~~~-~~d~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~--~~~~~i~~i~v~p 78 (140)
T PRK03624 2 AMEIRVFR-QADFEAVIALWERCDLTRPWNDPEMDIERKLNHDPSLFLVAEVGGEVVGTVMGGYD--GHRGWAYYLAVHP 78 (140)
T ss_pred ceEEEEcc-cccHHHHHHHHHhcCCCcchhhHHHHHHHHhcCCCceEEEEEcCCcEEEEEEeecc--CCCceEEEEEECH
Confidence 46677774 56899999998765 22343 2333455555566778888 89999999975541 1235664444
Q ss_pred -----ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh
Q psy3403 77 -----LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 77 -----gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
|||+.|+..++ .++..|+..++|.|...|++|++||.
T Consensus 79 ~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~ 121 (140)
T PRK03624 79 DFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYE 121 (140)
T ss_pred HHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHH
Confidence 99999999999 88889999999999999999999994
No 69
>PHA01807 hypothetical protein
Probab=98.47 E-value=7.8e-07 Score=83.20 Aligned_cols=102 Identities=11% Similarity=-0.047 Sum_probs=69.8
Q ss_pred ChhHHHHHHhhhCCCC---ccHHHH-HHHH---HhCCCeEEEE-eCCeEEEEEEeecccCCccceEEe-----cc-----
Q psy3403 15 QMPDIIKLIQKDLSEP---YSIYTY-RYFI---HNWPKFCFLM-DQLKTINIIENDTATQSIRSALNN-----TT----- 76 (511)
Q Consensus 15 dl~~I~~l~~~~LsEp---Ysi~~y-ryfl---~~wP~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~-----~a----- 76 (511)
++..|+..+-++++|. .+.... ..++ .+--...|+| .+|++||++.-......-.+++.. +.
T Consensus 16 ~~~~l~l~~l~e~p~~~~w~s~ee~~~~~~~~~~~~~~~~lva~~dg~lvG~~~l~~~~~~~~~~i~~l~~lYV~pe~RG 95 (153)
T PHA01807 16 ELQGLCWLAIQELEEFTLFRSKEEALERILDSTESNDRTELLVFRDGKLAGIAVLVFEDDPHVGPCLGVQWQYVLPEYRN 95 (153)
T ss_pred HHHHHHHHHHHhCccCCCCCChHHHHHHHHHHhhCCCceEEEEEECCEEEEEEEEEcCCCcceeeeccceeEEECHHHcC
Confidence 4455666666777774 332222 1222 2222334677 899999998765533222344433 22
Q ss_pred -ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhccc
Q psy3403 77 -LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYNGV 116 (511)
Q Consensus 77 -gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~~~ 116 (511)
|||++||..++ .+++.|+..+.|+|+.+|.+|++||-.-.
T Consensus 96 ~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~~~~ 137 (153)
T PHA01807 96 AGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYRRVK 137 (153)
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHhcC
Confidence 99999999999 88999999999999999999999997543
No 70
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=98.47 E-value=2.1e-06 Score=77.14 Aligned_cols=111 Identities=13% Similarity=0.037 Sum_probs=78.5
Q ss_pred CceEEEeCCCCCChhHHHHHHhhh------CCCC-ccHHHHHHHHHh-CCCeEEEE-eCCeEEEEEEeecccCCccceEE
Q psy3403 3 GGIKYVSYKSELQMPDIIKLIQKD------LSEP-YSIYTYRYFIHN-WPKFCFLM-DQLKTINIIENDTATQSIRSALN 73 (511)
Q Consensus 3 ~~i~y~~~~~e~dl~~I~~l~~~~------LsEp-Ysi~~yryfl~~-wP~l~~~A-~~g~~vG~i~~~~~~~~~rghiv 73 (511)
+.|.++|.+ .+|++.|.++.... +..| .+.-.|..++.. .+..++++ .+|++||++.-.....+-.+|+.
T Consensus 2 ~~i~lr~~~-~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 80 (162)
T PRK10140 2 SEIVIRHAE-TRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVA 80 (162)
T ss_pred CccEEEecc-hhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEecccccccceEE
Confidence 468899984 57899999988642 1122 233345555544 34466778 89999999987652222124442
Q ss_pred ------ecc----ChhhHHHHhhh-hccc-cCccEEEEEEeecChhhhHhhhc
Q psy3403 74 ------NTT----LVPSNLNSESK-DVED-SNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 74 ------~~a----gig~~L~~~~~-~~~~-~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
..+ |||++|+..++ ..++ .|+..+.|.|..+|++|++||..
T Consensus 81 ~~~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k 133 (162)
T PRK10140 81 DFGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKK 133 (162)
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHH
Confidence 222 99999999999 6666 79999999999999999999963
No 71
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=98.44 E-value=1e-06 Score=81.44 Aligned_cols=103 Identities=9% Similarity=0.027 Sum_probs=76.0
Q ss_pred CCCChhHHHHHHhhhCCCCcc-HHHHHHHHHhCCCeEEEEe--CCeEEEEEEeecccC-CccceEEecc--------Chh
Q psy3403 12 SELQMPDIIKLIQKDLSEPYS-IYTYRYFIHNWPKFCFLMD--QLKTINIIENDTATQ-SIRSALNNTT--------LVP 79 (511)
Q Consensus 12 ~e~dl~~I~~l~~~~LsEpYs-i~~yryfl~~wP~l~~~A~--~g~~vG~i~~~~~~~-~~rghiv~~a--------gig 79 (511)
..+|+++|.+|.......++. .+.|..+...++..++++. +|++|||++...... .-..+|..++ |||
T Consensus 5 ~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG 84 (157)
T TIGR02406 5 RIEDGAGIWELVKDCPPLDLNSSYAYLLLCTDFADTSIVAESEGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARGKGLA 84 (157)
T ss_pred ccccHHHHHHHHHhCCCCCcccceehhhhhhhcCCcEEEEEcCCCeEEEEEEEEecCCCCCeEEEEEEEEChHhccCcHH
Confidence 457999999999887332211 1223345567788888883 679999988654221 1124555555 999
Q ss_pred hHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 80 SNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 80 ~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
++|+..++ .++..++..+.++|..+|++|++||-.
T Consensus 85 ~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k 120 (157)
T TIGR02406 85 RRLLEALLERVACERVRHLETTITPDNQASRALFKA 120 (157)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHH
Confidence 99999999 778889999999999999999999963
No 72
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.41 E-value=1.7e-06 Score=89.05 Aligned_cols=105 Identities=7% Similarity=-0.007 Sum_probs=83.3
Q ss_pred eEEEeCCCCCChhHHHHHHhhh--CC---CCccHHHHHHHHHhCCCeEEEEe-----CCeEEEEEEeecccCCccceEEe
Q psy3403 5 IKYVSYKSELQMPDIIKLIQKD--LS---EPYSIYTYRYFIHNWPKFCFLMD-----QLKTINIIENDTATQSIRSALNN 74 (511)
Q Consensus 5 i~y~~~~~e~dl~~I~~l~~~~--Ls---EpYsi~~yryfl~~wP~l~~~A~-----~g~~vG~i~~~~~~~~~rghiv~ 74 (511)
+..++. .+.|++.|.+|..+. +. .+|+.-.++.++... .++.+.. ++.+|||++... ..+ ..+|..
T Consensus 187 ~~Ir~a-~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~~-~~~~~~~~d~~gd~givG~~~~~~-~~~-~~~I~~ 262 (320)
T TIGR01686 187 LNISKN-DEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQKE-EIVTVSMSDRFGDSGIIGIFVFEK-KEG-NLFIDD 262 (320)
T ss_pred EEEEEC-ChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcCC-CEEEEEEEecCCCCceEEEEEEEe-cCC-cEEEEE
Confidence 455555 578999999999988 54 578888888888764 4443333 567999999876 332 457766
Q ss_pred cc--------ChhhHHHHhhh-hccccCccEEEEEEee--cChhhhHhhh
Q psy3403 75 TT--------LVPSNLNSESK-DVEDSNCNITVICHSY--DNTQSQDILY 113 (511)
Q Consensus 75 ~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~--sN~~A~~l~~ 113 (511)
++ |||++||..++ .++..|+..+.|||++ .|.+|++||-
T Consensus 263 l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~fY~ 312 (320)
T TIGR01686 263 LCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLSFYE 312 (320)
T ss_pred EEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHHHHH
Confidence 66 99999999999 8889999999999997 7999999995
No 73
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.41 E-value=2.9e-06 Score=86.06 Aligned_cols=120 Identities=18% Similarity=0.259 Sum_probs=77.5
Q ss_pred cceEEEEcCCcCcHHHHHH-HHHHhcCCCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEE
Q psy3403 377 GGIKYVSYKSELQMPDIIK-LIQKDLSEPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAV 455 (511)
Q Consensus 377 ~~i~irr~lteeDle~L~e-L~~~~f~~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV 455 (511)
.+..+.+ ++++.++.... .+...+...|. ..+.++.. +..|++..+|++|+.|....... ...+|+ |.+
T Consensus 127 ~~y~l~~-Ide~l~~~~~~e~~s~d~~~~~~--s~e~Fl~~--G~Gf~i~~~~~iVs~~~s~~~~~----~~~EI~-I~T 196 (265)
T PF12746_consen 127 EGYELKR-IDEELYENSLEEEWSEDLVSQFS--SYEDFLKN--GFGFCILHDGEIVSGCSSYFVYE----NGIEID-IET 196 (265)
T ss_dssp TTCEEEE---HHHHHHHHHSCCCGGGTTTSS--SHHHHHHH----EEEEEETTEEEEEEEEEEEET----TEEEEE-EEE
T ss_pred CCeEEEE-CCHHHHHhhhhhHhHHHHHHhcC--CHHHHHhc--CcEEEEEECCEEEEEEEEEEEEC----CEEEEE-EEE
Confidence 4566665 55544433321 12222333342 23344443 67888889999998886655433 346777 899
Q ss_pred ccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 456 DENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 456 ~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
+|+|||||+|+.+..+++..+.++|+.- ...+ .|.+++++-+|+||+....
T Consensus 197 ~~~yR~kGLA~~~aa~~I~~Cl~~~l~P-~WDc--~N~~S~~lA~kLGf~~~~~ 247 (265)
T PF12746_consen 197 HPEYRGKGLATAVAAAFILECLENGLYP-SWDC--HNLASIALAEKLGFHFDFE 247 (265)
T ss_dssp -CCCTTSSHHHHHHHHHHHHHHHTT-EE-E-EE--SSHHHHHHHHHCT--EEEE
T ss_pred CHHhhcCCHHHHHHHHHHHHHHHCCCCc-CeeC--CCHHHHHHHHHcCCcccce
Confidence 9999999999999999999999998754 3334 6999999999999998764
No 74
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=98.37 E-value=1.7e-06 Score=86.77 Aligned_cols=111 Identities=11% Similarity=0.115 Sum_probs=82.1
Q ss_pred CceEEEeCCCCCChhHHHHHHhhhCCC-CccHHHHHHHHHh--CCCeEEEE-eCCeEEEEEEeecccCCccceEEecc--
Q psy3403 3 GGIKYVSYKSELQMPDIIKLIQKDLSE-PYSIYTYRYFIHN--WPKFCFLM-DQLKTINIIENDTATQSIRSALNNTT-- 76 (511)
Q Consensus 3 ~~i~y~~~~~e~dl~~I~~l~~~~LsE-pYsi~~yryfl~~--wP~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a-- 76 (511)
..+.+++. .++|+++|.+|....+.. |+++..-.|+... -...+|++ .+|++||++...+......++|..++
T Consensus 114 ~~~~IR~a-~~~D~~~l~~L~~~v~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~eI~~i~V~ 192 (266)
T TIGR03827 114 EGFTLRIA-TEDDADAMAALYRKVFPTYPFPIHDPAYLLETMKSNVVYFGVEDGGKIIALASAEMDPENGNAEMTDFATL 192 (266)
T ss_pred CceEEEEC-CHHHHHHHHHHHHHHhccCCCCccCHHHHHHHhcCCcEEEEEEECCEEEEEEEEecCCCCCcEEEEEEEEC
Confidence 45777776 467899999999887642 4433221222221 23456777 89999999987653222256676555
Q ss_pred ------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 77 ------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 77 ------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
|||++||..++ .+++.|+..++++|+..|.+|++||..
T Consensus 193 P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~k 237 (266)
T TIGR03827 193 PEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFAR 237 (266)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHHH
Confidence 99999999999 999999999999999999999999974
No 75
>KOG3397|consensus
Probab=98.34 E-value=2.3e-06 Score=81.65 Aligned_cols=76 Identities=18% Similarity=0.247 Sum_probs=65.6
Q ss_pred ECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCE
Q psy3403 426 DEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFV 505 (511)
Q Consensus 426 ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe 505 (511)
...++||-+.+...... ....+++.++|+.+.||+|.|+.||+-+..|++..|+++++|.+++. .+||+++||+
T Consensus 64 ~~~~VigH~rLS~i~n~--~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~DQ----~~FYe~lGYe 137 (225)
T KOG3397|consen 64 ENDEVLGHSRLSHLPNR--DHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDDQ----CRFYESLGYE 137 (225)
T ss_pred cccceeeeeccccCCCC--CceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecccc----hhhhhhhccc
Confidence 45688999988765543 35688999999999999999999999999999999999999998754 4899999998
Q ss_pred Ee
Q psy3403 506 RD 507 (511)
Q Consensus 506 ~v 507 (511)
..
T Consensus 138 ~c 139 (225)
T KOG3397|consen 138 KC 139 (225)
T ss_pred cc
Confidence 64
No 76
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=98.31 E-value=1.6e-06 Score=74.49 Aligned_cols=74 Identities=16% Similarity=0.134 Sum_probs=67.3
Q ss_pred ECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCE
Q psy3403 426 DEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFV 505 (511)
Q Consensus 426 ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe 505 (511)
.+|.+|.++... ..+++.+-++.|+|||||+.+.++..+++.+.+.|+. ++.+|++.|..++++.+++||+
T Consensus 6 peG~PVSW~lmd--------qtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P-~Y~hv~~~N~~~~r~~~~lg~~ 76 (89)
T PF08444_consen 6 PEGNPVSWSLMD--------QTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFP-FYGHVDEDNEASQRLSKSLGFI 76 (89)
T ss_pred CCCCEeEEEEec--------ccccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCC-eEeehHhccHHHHHHHHHCCCe
Confidence 368899888764 4688999999999999999999999999999999997 8999999999999999999998
Q ss_pred Eee
Q psy3403 506 RDK 508 (511)
Q Consensus 506 ~vG 508 (511)
...
T Consensus 77 ~~p 79 (89)
T PF08444_consen 77 FMP 79 (89)
T ss_pred ecC
Confidence 753
No 77
>PTZ00330 acetyltransferase; Provisional
Probab=98.29 E-value=9.6e-06 Score=72.07 Aligned_cols=109 Identities=11% Similarity=0.094 Sum_probs=77.4
Q ss_pred CcCceEEEeCCCCCChhHHHHHHhhhCCCC-ccHHHHHHHHHh--CCC---eEEEE-eCCeEEEEEEeeccc----CCc-
Q psy3403 1 MIGGIKYVSYKSELQMPDIIKLIQKDLSEP-YSIYTYRYFIHN--WPK---FCFLM-DQLKTINIIENDTAT----QSI- 68 (511)
Q Consensus 1 ~~~~i~y~~~~~e~dl~~I~~l~~~~LsEp-Ysi~~yryfl~~--wP~---l~~~A-~~g~~vG~i~~~~~~----~~~- 68 (511)
|...++.++. ..+|++.|.+|......+| ++.-....|... ++. ..+++ .+|++||++...... .+.
T Consensus 3 ~~~~~~ir~~-~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~ 81 (147)
T PTZ00330 3 MSGSLELRDL-EEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKFTRGGKC 81 (147)
T ss_pred CcceEEEEEc-ccccHHHHHHHHHHhcCCCccchhHHHHHHHHHhcCCCceEEEEEeCCCEEEEEEEEEeccccccCCCc
Confidence 5667888887 5568999999987665443 555444444432 222 33555 689999999876521 121
Q ss_pred cceEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh
Q psy3403 69 RSALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 69 rghiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
.++|..+. |||++|+..++ ..++.|+..+.|++ |.+|++||.
T Consensus 82 ~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~---n~~a~~~y~ 132 (147)
T PTZ00330 82 VGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDC---TEDMVAFYK 132 (147)
T ss_pred eEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEec---ChHHHHHHH
Confidence 35664444 99999999999 88889999998886 899999995
No 78
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=98.20 E-value=7.6e-06 Score=77.56 Aligned_cols=106 Identities=11% Similarity=0.155 Sum_probs=75.5
Q ss_pred EEeCCCCCChhHHHHHHhhhCCC-----C-cc----HHHHHHHHHhC-----CCeEEEE--eCCeEEEEEEeecccCCcc
Q psy3403 7 YVSYKSELQMPDIIKLIQKDLSE-----P-YS----IYTYRYFIHNW-----PKFCFLM--DQLKTINIIENDTATQSIR 69 (511)
Q Consensus 7 y~~~~~e~dl~~I~~l~~~~LsE-----p-Ys----i~~yryfl~~w-----P~l~~~A--~~g~~vG~i~~~~~~~~~r 69 (511)
+++. .++|++.|.+|....+.+ | ++ ...|..++..| +..++|| .+|++||+++...... ..
T Consensus 49 iR~a-~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~~~-~~ 126 (194)
T PRK10975 49 ARVA-TETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLRELND-TD 126 (194)
T ss_pred cccC-CcccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEecCC-Cc
Confidence 3344 567999999998775432 2 22 12333333332 3366676 4789999998875222 24
Q ss_pred ceEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 70 SALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 70 ghiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
++|..++ |||++|+..++ ..++.|+..+.|+|..+|++|++||..
T Consensus 127 ~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek 180 (194)
T PRK10975 127 ARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIR 180 (194)
T ss_pred eEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHH
Confidence 6664443 99999999999 788899999999999999999999963
No 79
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=98.18 E-value=1.5e-05 Score=71.53 Aligned_cols=104 Identities=11% Similarity=0.048 Sum_probs=77.4
Q ss_pred EEeCCCCCChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeEEEE-eCCeEEEEEEeecccCCccceEEecc--------C
Q psy3403 7 YVSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLM-DQLKTINIIENDTATQSIRSALNNTT--------L 77 (511)
Q Consensus 7 y~~~~~e~dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a--------g 77 (511)
.+++ .++|++.|.++.......|+....|......+ .+.+.+ .+|++||+++...... .+++..++ |
T Consensus 4 iR~~-~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vG~~~~~~~~~--~~~~~~i~v~~~~rg~G 79 (146)
T PRK09491 4 ISSL-TPADLPAAYHIEQRAHAFPWSEKTFASNQGER-YLNLKLTVNGQMAAFAITQVVLD--EATLFNIAVDPDYQRQG 79 (146)
T ss_pred hhcC-ChhhhHHHHHHHHhcCCCCCCHHHHHHHHhcC-ceEEEEEECCeEEEEEEEEeecC--ceEEEEEEECHHHccCC
Confidence 4455 56789999999888777788776665443322 222334 8899999998765222 24454444 9
Q ss_pred hhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 78 VPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 78 ig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
||+.|+..++ ..++.|+..+.++|...|.+|+++|-.
T Consensus 80 ~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k 117 (146)
T PRK09491 80 LGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYES 117 (146)
T ss_pred HHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHH
Confidence 9999999999 777899999999999999999999964
No 80
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=98.16 E-value=1.4e-05 Score=75.75 Aligned_cols=107 Identities=9% Similarity=0.095 Sum_probs=73.8
Q ss_pred EEEeCCCCCChhHHHHHHhhhCCC-----Cc--cHH---HHHHHHHhC-----CCeEEE-E-eCCeEEEEEEeecccCCc
Q psy3403 6 KYVSYKSELQMPDIIKLIQKDLSE-----PY--SIY---TYRYFIHNW-----PKFCFL-M-DQLKTINIIENDTATQSI 68 (511)
Q Consensus 6 ~y~~~~~e~dl~~I~~l~~~~LsE-----pY--si~---~yryfl~~w-----P~l~~~-A-~~g~~vG~i~~~~~~~~~ 68 (511)
..++. ..+|++.|++|......+ |+ +.- .+.-.+..| +..+++ + .+|++||+|.-......
T Consensus 45 ~lR~~-~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~~~~- 122 (191)
T TIGR02382 45 GARVA-TETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLRELNDT- 122 (191)
T ss_pred cceeC-ChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEecCCC-
Confidence 34444 457999999998877532 22 111 122223333 334454 4 58999999987652222
Q ss_pred cceEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 69 RSALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 69 rghiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
+++|..++ |||++|+..++ ..++.|+..+.|+|..+|.+|++||..
T Consensus 123 ~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~k 177 (191)
T TIGR02382 123 DARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIR 177 (191)
T ss_pred ceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHH
Confidence 45664433 99999999999 667899999999999999999999974
No 81
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.13 E-value=2.2e-05 Score=65.53 Aligned_cols=71 Identities=18% Similarity=0.139 Sum_probs=54.9
Q ss_pred EEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHH
Q psy3403 422 FLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYEN 501 (511)
Q Consensus 422 fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEK 501 (511)
|.+..+|+.+|++.+... +....|....|.|++||||||+.|+++++++|++.|.+ |... -.-+.+++++
T Consensus 2 F~~~~~g~~~a~l~Y~~~-----~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~k-v~p~----C~y~~~~~~~ 71 (78)
T PF14542_consen 2 FELKDDGEEIAELTYRED-----GGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLK-VVPT----CSYVAKYFRR 71 (78)
T ss_dssp EEEESSTTEEEEEEEEES-----SSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-E-EEET----SHHHHHHHHH
T ss_pred EEEEECCEEEEEEEEEeC-----CCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCE-EEEE----CHHHHHHHHh
Confidence 345567889999999762 35688999999999999999999999999999999874 4443 3667777776
Q ss_pred C
Q psy3403 502 L 502 (511)
Q Consensus 502 l 502 (511)
+
T Consensus 72 h 72 (78)
T PF14542_consen 72 H 72 (78)
T ss_dssp -
T ss_pred C
Confidence 4
No 82
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=98.12 E-value=1.1e-05 Score=68.80 Aligned_cols=91 Identities=10% Similarity=0.169 Sum_probs=64.3
Q ss_pred ChhHHHHHHhhhCCC---Ccc----------HHHHHHHHHhCCCeEEEE-eCCeEEEEEEeecccCCccceEEecc----
Q psy3403 15 QMPDIIKLIQKDLSE---PYS----------IYTYRYFIHNWPKFCFLM-DQLKTINIIENDTATQSIRSALNNTT---- 76 (511)
Q Consensus 15 dl~~I~~l~~~~LsE---pYs----------i~~yryfl~~wP~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a---- 76 (511)
|+++|++|......+ +|+ .-..+-.+.+=+..+||| .+|++|||+.-. . .|+|-.+.
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~---~--~~~i~~l~v~p~ 75 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAWRYSPEDLEEYLEEGSHTIFVAEEGGEIVGFAWLE---P--DGEISHLYVLPE 75 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHHHSSHHHHHHHHCTCCCEEEEEEETTEEEEEEEEE---T--CEEEEEEEE-GG
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHHhcCHHHHHHHHHhcCCEEEEEEECCEEEEEEEEc---C--CCeEEEEEEChh
Confidence 577777777775433 222 233333444434688889 999999999854 2 35553333
Q ss_pred ----ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 77 ----LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 77 ----gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
|||++|+..++ .++. |...+.++ +|.+|+++|..
T Consensus 76 ~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~---~~~~a~~~y~~ 114 (117)
T PF13673_consen 76 YRGRGIGRALLDAAEKEAKD-GIRRLTVE---ANERARRFYRK 114 (117)
T ss_dssp GTTSSHHHHHHHHHHHHHTT-TCEEEEEE---C-HHHHHHHHH
T ss_pred hcCCcHHHHHHHHHHHHHHc-CCcEEEEE---eCHHHHHHHHh
Confidence 99999999999 7777 98888888 99999999963
No 83
>PHA00673 acetyltransferase domain containing protein
Probab=98.04 E-value=2.2e-05 Score=73.85 Aligned_cols=105 Identities=9% Similarity=-0.023 Sum_probs=73.3
Q ss_pred EEeCCCCCChhHHHHHHhhh--------C--CCCccHHHHHHHHHhCCCeEEEE-eCCeEEEEEEeecccC----C-ccc
Q psy3403 7 YVSYKSELQMPDIIKLIQKD--------L--SEPYSIYTYRYFIHNWPKFCFLM-DQLKTINIIENDTATQ----S-IRS 70 (511)
Q Consensus 7 y~~~~~e~dl~~I~~l~~~~--------L--sEpYsi~~yryfl~~wP~l~~~A-~~g~~vG~i~~~~~~~----~-~rg 70 (511)
-+.|...+|+|.|.+|...+ . +.||... |.-++..=-...|+| .+|++||+++..+... + .++
T Consensus 8 ~~~~A~~~D~paI~~LLadd~l~~~r~d~~~~~~y~~a-f~ai~~dp~~~llVa~~~g~vVG~~~l~~~p~l~~~~~~~~ 86 (154)
T PHA00673 8 RVAFAELADAPTFASLCAEYAHESANADLAGRAPDHHA-YAGMEAAGVAHFLGVFRGEELVGFACLLVTPVPHFKGQLIG 86 (154)
T ss_pred HHhhccHhhHHHHHHHHHhcccccccccccccchhHHH-HHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCccCCccEE
Confidence 34578889999999998662 2 2456555 555555544555567 8999999999988322 1 266
Q ss_pred eEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh
Q psy3403 71 ALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 71 hiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
.|-++- |||++|+..++ ..|+.||..+||=-..| ..-+.||+
T Consensus 87 ~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~-~~tv~fy~ 137 (154)
T PHA00673 87 TTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTE-GRLVQLLP 137 (154)
T ss_pred EEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCC-ccchHHHH
Confidence 773333 99999999999 99999999998633222 22356665
No 84
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=98.03 E-value=1.3e-05 Score=64.36 Aligned_cols=64 Identities=8% Similarity=0.022 Sum_probs=55.7
Q ss_pred E-eCCeEEEEEEeecccCC----ccceEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh
Q psy3403 50 M-DQLKTINIIENDTATQS----IRSALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 50 A-~~g~~vG~i~~~~~~~~----~rghiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
| ++|++||+++....... -.++|..++ |||+.|+..++ .++..|+..+++-|..+|.+|+++|.
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~ 78 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYE 78 (83)
T ss_dssp EEETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHH
T ss_pred CcCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHH
Confidence 5 79999999999995433 256776555 99999999999 88889999999999999999999995
No 85
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.03 E-value=5.1e-05 Score=69.33 Aligned_cols=111 Identities=19% Similarity=0.210 Sum_probs=70.3
Q ss_pred CcCcHHHHHHHHHHhcCCCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHH
Q psy3403 386 SELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIG 465 (511)
Q Consensus 386 teeDle~L~eL~~~~f~~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIG 465 (511)
+++|..++..+| .....+.+...+ ......|.|.-+++++|.+.+.... ..+.+.++.|.+.=||+|+|
T Consensus 11 s~Qd~iDL~KIw-----p~~~~~~l~~~l-~~~~~l~aArFNdRlLgAv~v~~~~-----~~~~L~~l~VRevTRrRGVG 79 (128)
T PF12568_consen 11 SEQDRIDLAKIW-----PQQDPEQLEQWL-DEGHRLFAARFNDRLLGAVKVTISG-----QQAELSDLCVREVTRRRGVG 79 (128)
T ss_dssp -HHHHHHHHHH------TTS-----------SSEEEEEEEETTEEEEEEEEEEET-----TEEEEEEEEE-TT-SSSSHH
T ss_pred CHHHHHHHHHhC-----CCCCHHHHHHHh-ccCCeEEEEEechheeeeEEEEEcC-----cceEEeeEEEeeccccccHH
Confidence 455666666666 233344555555 3456788899999999999998743 57999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEEec----CCHHHHHHHHHCCCEEeeE
Q psy3403 466 SNLVLKAIRAMVADDADEVVLETEI----TNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 466 raLL~aLie~Are~G~~rI~L~V~~----~N~~AikFYEKlGFe~vG~ 509 (511)
..|++++.+.+. +++...+.... .-.....|...+||...+.
T Consensus 80 ~yLlee~~rq~p--~i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~~~ 125 (128)
T PF12568_consen 80 LYLLEEVLRQLP--DIKHWWLADEGVEPQDRAVMAAFMQACGFSAQSD 125 (128)
T ss_dssp HHHHHHHHHHS---S--EEEE--TT-S--THHHHHHHHHHHT-EE-SS
T ss_pred HHHHHHHHHHCC--CCcEEEEecCCCcccchHHHHHHHHHcCccccCC
Confidence 999999999984 56666665431 2255668999999987653
No 86
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.00 E-value=0.00011 Score=71.63 Aligned_cols=102 Identities=16% Similarity=0.137 Sum_probs=68.3
Q ss_pred CHHHHHHHHhcCCcEEEEEEECC--eEEEEEEEEEeccc---------------------------------cccceEEE
Q psy3403 406 SIYTYRYFIHNWPKFCFLAMDEQ--KCVGAIVCKLDIHR---------------------------------KVIRRGYI 450 (511)
Q Consensus 406 see~~e~~le~~~~~~fVA~ddG--eLVG~a~l~~~~~~---------------------------------~~~~~a~I 450 (511)
++.++...++......|++..++ +++|.+.+..+..- .....+.|
T Consensus 14 sPnDL~~LlDaP~h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RI 93 (196)
T PF13718_consen 14 SPNDLQLLLDAPNHRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARI 93 (196)
T ss_dssp -HHHHHHHHH-TTEEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEE
T ss_pred CHHHHHHHhcCCcceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeE
Confidence 45777777877778888999888 99999988654421 01123679
Q ss_pred EEEEEccCccCCcHHHHHHHHHHHHHH-------------------------HCCCCEEEEEEecCCHHHHHHHHHCCCE
Q psy3403 451 AMLAVDENYRKRKIGSNLVLKAIRAMV-------------------------ADDADEVVLETEITNRPALKLYENLGFV 505 (511)
Q Consensus 451 ~~IaV~PeyRGQGIGraLL~aLie~Ar-------------------------e~G~~rI~L~V~~~N~~AikFYEKlGFe 505 (511)
-.|+|+|++|++|+|++|++.+.+++. ..++..+-.. .-....-.+||.|+||+
T Consensus 94 vRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtS-FG~t~~Ll~FW~k~gf~ 172 (196)
T PF13718_consen 94 VRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTS-FGATPELLKFWQKNGFV 172 (196)
T ss_dssp EEEEE-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEE-EE--HHHHHHHHCTT-E
T ss_pred EEEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEec-cCCCHHHHHHHHHCCcE
Confidence 999999999999999999999999993 4556533222 22346789999999999
Q ss_pred Eee
Q psy3403 506 RDK 508 (511)
Q Consensus 506 ~vG 508 (511)
.+.
T Consensus 173 pv~ 175 (196)
T PF13718_consen 173 PVY 175 (196)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 87
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=97.99 E-value=2.9e-05 Score=71.32 Aligned_cols=119 Identities=12% Similarity=0.090 Sum_probs=89.4
Q ss_pred cCcHHHHHHHHHHhc-C-CCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEec-----------cccccceEEEEEE
Q psy3403 387 ELQMPDIIKLIQKDL-S-EPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDI-----------HRKVIRRGYIAML 453 (511)
Q Consensus 387 eeDle~L~eL~~~~f-~-~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~-----------~~~~~~~a~I~~I 453 (511)
+.|..++..+.+..- . .+...+.+..++.+ .|+|..+|.+-|++..+-.. ........+|+.+
T Consensus 15 apd~aavLaLNNeha~elswLe~erL~~l~~e----AF~ArR~G~l~afl~tFd~~a~ydSpNFlWFrErYe~F~YvDRv 90 (167)
T COG3818 15 APDLAAVLALNNEHALELSWLELERLYRLYKE----AFVARRDGNLAAFLVTFDSSARYDSPNFLWFRERYENFFYVDRV 90 (167)
T ss_pred CCchhhHHhccchhhhhccccCHHHHHHHHHH----HHHHhhccchhhheeeccccccCCCCceeehhhhCCceEEEEEE
Confidence 337777777765422 2 34445555555543 25787788877776543211 0124456899999
Q ss_pred EEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEE--ecCCHHHHHHHHHCCCEEeeE
Q psy3403 454 AVDENYRKRKIGSNLVLKAIRAMVADDADEVVLET--EITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 454 aV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V--~~~N~~AikFYEKlGFe~vG~ 509 (511)
.|....||+|+|++|...+..+|...|+..+..+| ++.|+++..|.-.+||.++|.
T Consensus 91 VVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaalGF~eVG~ 148 (167)
T COG3818 91 VVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAALGFHEVGQ 148 (167)
T ss_pred EEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhcCceEccc
Confidence 99999999999999999999999999999988886 678999999999999999874
No 88
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=97.96 E-value=7.4e-05 Score=67.08 Aligned_cols=103 Identities=12% Similarity=0.086 Sum_probs=69.9
Q ss_pred CCCChhHHHHHHhh-----hCCCC---ccHHHHHHHHHhC-----CCeEEEEe-CCeEEEEEEeecccCCcc----ceEE
Q psy3403 12 SELQMPDIIKLIQK-----DLSEP---YSIYTYRYFIHNW-----PKFCFLMD-QLKTINIIENDTATQSIR----SALN 73 (511)
Q Consensus 12 ~e~dl~~I~~l~~~-----~LsEp---Ysi~~yryfl~~w-----P~l~~~A~-~g~~vG~i~~~~~~~~~r----ghiv 73 (511)
.++|++.|.+|... .+... ++.-.++-|+... +-+++|+. +|++|||+..+.-...-. +.++
T Consensus 5 ~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~~~~~~~~~~~v 84 (155)
T PF13420_consen 5 TEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDPYNHTAELSIYV 84 (155)
T ss_dssp -GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSSGTTEEEEEEEE
T ss_pred cHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeeccCCEEEEeeEE
Confidence 46789999888863 22211 3455566666654 33444456 999999998774222111 2223
Q ss_pred ecc----ChhhHHHHhhh-hc-cccCccEEEEEEeecChhhhHhhhc
Q psy3403 74 NTT----LVPSNLNSESK-DV-EDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 74 ~~a----gig~~L~~~~~-~~-~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
... |||+.|+..++ .. ++.|...++++|..+|++|++||..
T Consensus 85 ~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~ 131 (155)
T PF13420_consen 85 SPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKK 131 (155)
T ss_dssp EGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHH
T ss_pred ChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHh
Confidence 322 99999999999 66 7899999999999999999999964
No 89
>KOG4135|consensus
Probab=97.94 E-value=7.2e-05 Score=70.06 Aligned_cols=98 Identities=17% Similarity=0.290 Sum_probs=76.0
Q ss_pred HHHhcCCcEEEEEEEC----------CeEEEEEEEEEecccc------ccceEEEEEEEEccCccCCcHHHHHHHHHHHH
Q psy3403 412 YFIHNWPKFCFLAMDE----------QKCVGAIVCKLDIHRK------VIRRGYIAMLAVDENYRKRKIGSNLVLKAIRA 475 (511)
Q Consensus 412 ~~le~~~~~~fVA~dd----------GeLVG~a~l~~~~~~~------~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~ 475 (511)
.|....+...||+.+. ..+||-+.+++..... ....+++.-+.-.|..||+|+|+.++.+++.|
T Consensus 56 sW~~DeDKlTFIVLdaE~~ea~~~ev~~MvGDvNlFlt~~~~~~n~s~~~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y 135 (185)
T KOG4135|consen 56 SWREDEDKLTFIVLDAEMNEAGEDEVDHMVGDVNLFLTTSPDTENPSDDVITGEVEVMIAEPRGRGKGIGTEAVRAMLAY 135 (185)
T ss_pred hhccCCcceEEEEEechhcccCchhHhhhccceeeEEecCCCcCCcccceeeeeEEEEEecccccCCCccHHHHHHHHHH
Confidence 3444556667776531 2378888776543321 12357788778899999999999999999999
Q ss_pred HHH-CCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 476 MVA-DDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 476 Are-~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
+.. .++.+..+.+..+|.++++||+|++|..+..
T Consensus 136 ~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~ 170 (185)
T KOG4135|consen 136 AYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFY 170 (185)
T ss_pred HHHHhhhheEEEEecCCCchHHHHHHHhhheeeee
Confidence 987 6889999999999999999999999997653
No 90
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=97.93 E-value=7.7e-05 Score=69.67 Aligned_cols=111 Identities=13% Similarity=0.150 Sum_probs=75.6
Q ss_pred CceEEEeCCCCCChhHHHHHHhhh------CCCCccHHH-----HHHHHHhCCCeEEEE-eCCeEEEEEEe-ecccCCcc
Q psy3403 3 GGIKYVSYKSELQMPDIIKLIQKD------LSEPYSIYT-----YRYFIHNWPKFCFLM-DQLKTINIIEN-DTATQSIR 69 (511)
Q Consensus 3 ~~i~y~~~~~e~dl~~I~~l~~~~------LsEpYsi~~-----yryfl~~wP~l~~~A-~~g~~vG~i~~-~~~~~~~r 69 (511)
+.+.++|+.. +|++.|.++.... ++.|+..+. +.-++...+..+|++ .+|++||++.- .+......
T Consensus 5 ~~l~lR~~~~-~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~~~~~~~~~~~~~ 83 (186)
T PRK15130 5 HSVKLRPLER-EDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRR 83 (186)
T ss_pred CeeEEecCCH-HHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEEECCEEEEEEEEEeecCCCCe
Confidence 3678888854 4788888886543 334543321 112223445667777 99999999954 33111112
Q ss_pred ---ceEEecc----ChhhHHHHhhh--hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 70 ---SALNNTT----LVPSNLNSESK--DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 70 ---ghiv~~a----gig~~L~~~~~--~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
|..+..+ |+|+.|+..++ ...+.|+..|+++|...|.+|++||..
T Consensus 84 ~~~~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek 137 (186)
T PRK15130 84 AEFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRK 137 (186)
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHH
Confidence 3334443 99999999888 445689999999999999999999975
No 91
>KOG4144|consensus
Probab=97.92 E-value=6.2e-06 Score=77.47 Aligned_cols=122 Identities=19% Similarity=0.166 Sum_probs=79.5
Q ss_pred CCcCcHHHHHHHHHHhcCCCC--CHHHHHHHHhcCCcEEEEE---------EECCeEEEEEEEEEecc-----------c
Q psy3403 385 KSELQMPDIIKLIQKDLSEPY--SIYTYRYFIHNWPKFCFLA---------MDEQKCVGAIVCKLDIH-----------R 442 (511)
Q Consensus 385 lteeDle~L~eL~~~~f~~~~--see~~e~~le~~~~~~fVA---------~ddGeLVG~a~l~~~~~-----------~ 442 (511)
.-.++.+++..|...+|++.- +.+.+...+-..+..+-.. ...+.+||.+....... .
T Consensus 17 ~i~e~~q~~~~Lea~~FPe~erasfeii~~r~i~~pevc~glf~~~~h~~~~~~~tLIghIigs~~~~E~lt~ESm~kh~ 96 (190)
T KOG4144|consen 17 GIPESCQRRHTLEASEFPEDERASFEIIRERFISVPEVCPGLFDEIRHFLTLCEGTLIGHIIGSLWDKERLTQESMTKHR 96 (190)
T ss_pred CChHHHHHHhccccccCChhHHHHHHHHHHHHhcchhhcchhhhhHHhhhhhccccceehhhcccCcchhhhHHHHhhhh
Confidence 444567777777777776321 1122223232223332222 12688999987754332 1
Q ss_pred cccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHC-CCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 443 KVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVAD-DADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 443 ~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~-G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
..+....|+.++|+|+||.||+|..|+..-++..-.+ -..++.|-+. .+.+.||+++||..+|.
T Consensus 97 s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h---~pLvPFYEr~gFk~vgp 161 (190)
T KOG4144|consen 97 SGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICH---DPLVPFYERFGFKAVGP 161 (190)
T ss_pred cCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeec---CCccchhHhcCceeecc
Confidence 2345588999999999999999999999877766543 3456677665 56799999999998763
No 92
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=97.89 E-value=9e-05 Score=66.87 Aligned_cols=106 Identities=10% Similarity=-0.002 Sum_probs=66.4
Q ss_pred EeCCCCCChhHHHHHHhhh----C-CCCccHHHHHH---HHHhCCC-eEEEE-eCCeEEEEEEeec-c------cCCccc
Q psy3403 8 VSYKSELQMPDIIKLIQKD----L-SEPYSIYTYRY---FIHNWPK-FCFLM-DQLKTINIIENDT-A------TQSIRS 70 (511)
Q Consensus 8 ~~~~~e~dl~~I~~l~~~~----L-sEpYsi~~yry---fl~~wP~-l~~~A-~~g~~vG~i~~~~-~------~~~~rg 70 (511)
|+.....||+.|+++.... + ..+.+...-++ .+..-|. .+||+ ++|+.|||+...- . ...+--
T Consensus 2 R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~dg~~~g~~~~~~~~~~~~~~~~~~~~ 81 (152)
T PF13523_consen 2 RPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAEDDGEPIGYFEIYWPDEDYDADDGDRGI 81 (152)
T ss_dssp EE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEETTEEEEEEEEEEGGGSS---TTEEEE
T ss_pred eeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEECCEEEEEEEEecccccccCCCCEEEE
Confidence 4454368999999998765 2 22223222233 3323344 46667 9999999998853 1 111111
Q ss_pred eE--Eecc----ChhhHHHHhhh-hccc-cCccEEEEEEeecChhhhHhhh
Q psy3403 71 AL--NNTT----LVPSNLNSESK-DVED-SNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 71 hi--v~~a----gig~~L~~~~~-~~~~-~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
|+ +..+ |+|++++..++ .+.+ .++..+.++|..+|++||++|.
T Consensus 82 ~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~ 132 (152)
T PF13523_consen 82 HRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYE 132 (152)
T ss_dssp EEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHH
T ss_pred eeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHH
Confidence 22 2222 99999999999 5555 6999999999999999999996
No 93
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=97.79 E-value=0.00013 Score=63.49 Aligned_cols=94 Identities=14% Similarity=0.209 Sum_probs=67.3
Q ss_pred EEeCCCCCChhHHHHHHhhhCCCCccHH-HHHHHHHhC-CCeEEEE-eCCeEEEEEEeecccCCc------cceEEecc-
Q psy3403 7 YVSYKSELQMPDIIKLIQKDLSEPYSIY-TYRYFIHNW-PKFCFLM-DQLKTINIIENDTATQSI------RSALNNTT- 76 (511)
Q Consensus 7 y~~~~~e~dl~~I~~l~~~~LsEpYsi~-~yryfl~~w-P~l~~~A-~~g~~vG~i~~~~~~~~~------rghiv~~a- 76 (511)
++++ .++|+++|.+|....|.+.-+.. ...|+-..+ |..+++| .+|++||.+..--.+..+ -|+|.+++
T Consensus 2 iR~~-~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v 80 (127)
T PF13527_consen 2 IRPL-TESDFEQIIELFNEAFGDSESPPEIWEYFRNLYGPGRCVVAEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAV 80 (127)
T ss_dssp EEEE--GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHTTEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred ceEC-CHHHHHHHHHHHHHHCCCCCCchhhhhhhhcccCcCcEEEEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEE
Confidence 4555 47899999999999998765553 222333322 6789999 999999988874421111 36666666
Q ss_pred -------ChhhHHHHhhh-hccccCccEEEEEE
Q psy3403 77 -------LVPSNLNSESK-DVEDSNCNITVICH 101 (511)
Q Consensus 77 -------gig~~L~~~~~-~~~~~~~~ev~LEv 101 (511)
|||++||..++ .|++.|+.-++|--
T Consensus 81 ~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~ 113 (127)
T PF13527_consen 81 DPEYRGRGLGRQLMRALLERARERGVPFIFLFP 113 (127)
T ss_dssp -GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE-
T ss_pred CHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec
Confidence 99999999999 99999999999844
No 94
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=97.71 E-value=0.00025 Score=63.62 Aligned_cols=107 Identities=11% Similarity=0.062 Sum_probs=70.0
Q ss_pred EEeCCCCCChhHHHHHHhhh------CCCC-ccHHHHHHHHHh---CC-CeEEEE-eCCeEEEEEEeecccCCc----cc
Q psy3403 7 YVSYKSELQMPDIIKLIQKD------LSEP-YSIYTYRYFIHN---WP-KFCFLM-DQLKTINIIENDTATQSI----RS 70 (511)
Q Consensus 7 y~~~~~e~dl~~I~~l~~~~------LsEp-Ysi~~yryfl~~---wP-~l~~~A-~~g~~vG~i~~~~~~~~~----rg 70 (511)
++|. ..+|++.|.++.... .++| ++.-..+.++.. .| ..+|++ .+|++||++.-....... -|
T Consensus 3 lr~~-~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~~~~~g 81 (156)
T TIGR03585 3 FTPL-NSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQESRPIGVISFTDINLVHKSAFWG 81 (156)
T ss_pred cccC-CHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecChhhCeEEEE
Confidence 3455 345788888764321 2344 664443333333 34 346666 899999999876422111 13
Q ss_pred eEEecc---ChhhHHHHhhh-hc-cccCccEEEEEEeecChhhhHhhhc
Q psy3403 71 ALNNTT---LVPSNLNSESK-DV-EDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 71 hiv~~a---gig~~L~~~~~-~~-~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
..+... |||++++..++ .. ++.++..+++.|...|.+|+++|..
T Consensus 82 ~~~~~~~~~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k 130 (156)
T TIGR03585 82 IYANPFCKPGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEK 130 (156)
T ss_pred EEeChhhhcCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHH
Confidence 222223 99999999999 44 4589999999999999999999964
No 95
>PLN02825 amino-acid N-acetyltransferase
Probab=97.70 E-value=5.4e-05 Score=83.39 Aligned_cols=100 Identities=6% Similarity=-0.096 Sum_probs=74.6
Q ss_pred CCCCChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeEEEE-eCCeEEEEEEeecccCCccceEEecc--------ChhhH
Q psy3403 11 KSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLM-DQLKTINIIENDTATQSIRSALNNTT--------LVPSN 81 (511)
Q Consensus 11 ~~e~dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a--------gig~~ 81 (511)
...+|++.|++|++..-.+++...-.+..+.++.+.|+|+ .+|++||++.-........|+|-.+| |||++
T Consensus 373 At~eDi~~I~~Li~~lee~g~lv~rs~e~le~ei~~f~V~e~Dg~IVG~aal~~~~~~~~aEI~~laV~P~yRGkGiG~~ 452 (515)
T PLN02825 373 ARVEDLAGIRQIIRPLEESGILVRRTDEELLRALDSFVVVEREGSIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDK 452 (515)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcCCCHHHHHhcCCcEEEEEECCEEEEEEEEEeecCCCcEEEEEEEECHHHcCCCHHHH
Confidence 4568999999999764334443332344456666778888 89999999875431112247886677 99999
Q ss_pred HHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 82 LNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 82 L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
||..++ ..++.|+..++|++ ++|++||..
T Consensus 453 LL~~le~~Ar~~G~~~L~Llt----t~a~~fY~k 482 (515)
T PLN02825 453 LLDYIEKKAASLGLEKLFLLT----TRTADWFVR 482 (515)
T ss_pred HHHHHHHHHHHCCCCEEEEEe----CcHHHHHHH
Confidence 999999 88999999999987 678999964
No 96
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.69 E-value=6.3e-05 Score=58.28 Aligned_cols=44 Identities=39% Similarity=0.495 Sum_probs=40.2
Q ss_pred EEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCC
Q psy3403 453 LAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGF 504 (511)
Q Consensus 453 IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGF 504 (511)
++|+|+|||+|||+.|+..++++++..|+. .+..+..+|+++||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~--------~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS--------LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce--------ehHHHHHHHHhcCC
Confidence 999999999999999999999999997775 56788999999987
No 97
>PRK07757 acetyltransferase; Provisional
Probab=97.68 E-value=0.00031 Score=63.25 Aligned_cols=117 Identities=5% Similarity=-0.019 Sum_probs=76.9
Q ss_pred eEEEeCCCCCChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeEEEE-eCCeEEEEEEeecccCCccceEEecc-------
Q psy3403 5 IKYVSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLM-DQLKTINIIENDTATQSIRSALNNTT------- 76 (511)
Q Consensus 5 i~y~~~~~e~dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a------- 76 (511)
+.+++. ..+|++.|.+|.....++.+....+.-.+..|...++++ .+|++|||+.-...... .++|..++
T Consensus 2 ~~ir~~-~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~lvG~~~l~~~~~~-~~~i~~v~V~p~~rg 79 (152)
T PRK07757 2 MEIRKA-RLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAEEEGEIVGCCALHILWED-LAEIRSLAVSEDYRG 79 (152)
T ss_pred ceEeeC-CcccHHHHHHHHHHHHhcCCccCCCHHHHHhccCcEEEEEECCEEEEEEEEEeccCC-ceEEEEEEECHHHcC
Confidence 355666 456899999998765444332111123345566677888 89999999987663222 35663333
Q ss_pred -ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc-ccccCCCCCCCccc
Q psy3403 77 -LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN-GVTNSNHNDLGSNK 128 (511)
Q Consensus 77 -gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~-~~~~~~~~~~~~~~ 128 (511)
|+|++||..++ ..+..|+..+++.+ .+++||.. |.......++..+.
T Consensus 80 ~Glg~~Ll~~l~~~a~~~g~~~i~~~~-----~~~~~Y~k~GF~~~~~~~~~~~~ 129 (152)
T PRK07757 80 QGIGRMLVEACLEEARELGVKRVFALT-----YQPEFFEKLGFREVDKEALPQKV 129 (152)
T ss_pred CCHHHHHHHHHHHHHHhCCCCeEEEEe-----CcHHHHHHCCCEEcccccCChhH
Confidence 99999999999 77778998887654 35688864 55555555555443
No 98
>KOG3138|consensus
Probab=97.66 E-value=7.9e-05 Score=72.19 Aligned_cols=102 Identities=11% Similarity=0.051 Sum_probs=85.0
Q ss_pred CCCChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeEEEE-eCCeEEEEEEeecccCC-----c---c-ceEEecc-----
Q psy3403 12 SELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLM-DQLKTINIIENDTATQS-----I---R-SALNNTT----- 76 (511)
Q Consensus 12 ~e~dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~~~A-~~g~~vG~i~~~~~~~~-----~---r-ghiv~~a----- 76 (511)
+..++.++.+|.+..|+--|+..+|+.-+.. ++++=+| +.+..||.+.++..... . | ++|.+++
T Consensus 23 t~~nl~~~~~l~~~~fP~~y~~kfy~~~~~~-~~~~~~A~~~~~~v~a~~~k~~~~~~~~~r~~~~~~~yi~~Lgvl~~y 101 (187)
T KOG3138|consen 23 TPNNLKQLKQLNEDIFPISYVDKFYPDVLSN-GDLTQLAYYNEIAVGAVACKLIKFVQNAKRLFGNRVIYILSLGVLPRY 101 (187)
T ss_pred CcchHHHHHHHhccccCcchHHHHHHHHHhc-CCHHHhhhhccccccceeeeehhhhhhhhhhhccceeEEEeecccHHH
Confidence 5578999999999999999999998887775 7777778 89999999999983221 1 1 7788888
Q ss_pred ---ChhhHHHHhhhhccc-cC-ccEEEEEEeecChhhhHhhhc
Q psy3403 77 ---LVPSNLNSESKDVED-SN-CNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 77 ---gig~~L~~~~~~~~~-~~-~~ev~LEvr~sN~~A~~l~~~ 114 (511)
|||+.|+..++.+.. -. |.-|||+|+..|.+||.+|-+
T Consensus 102 R~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~ 144 (187)
T KOG3138|consen 102 RNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEK 144 (187)
T ss_pred HhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHh
Confidence 999999999993333 44 899999999999999999975
No 99
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=97.65 E-value=0.00015 Score=77.75 Aligned_cols=103 Identities=7% Similarity=-0.061 Sum_probs=75.8
Q ss_pred EEeCCCCCChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeEEEE-eCCeEEEEEEeecccCCccceEEecc--------C
Q psy3403 7 YVSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLM-DQLKTINIIENDTATQSIRSALNNTT--------L 77 (511)
Q Consensus 7 y~~~~~e~dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a--------g 77 (511)
+++. .++|++.|.+|+..-..+.+.....+..+..+...++++ .+|++||++.-........|+|..++ |
T Consensus 285 IR~a-t~~Dl~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~V~~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~G 363 (429)
T TIGR01890 285 IRQA-TIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSIIEHDGNIIGCAALYPYAEEDCGEMACLAVSPEYQDGG 363 (429)
T ss_pred eEEC-CHHHHHHHHHHHHHHHHcCCchhhhHHHHHhhcCcEEEEEECCEEEEEEEEEecCCCCeEEEEEEEECHHHcCCC
Confidence 4444 568999999998644444555445566677788888888 89999999986653333358886666 9
Q ss_pred hhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 78 VPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 78 ig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
||++||..++ .+++.|+..+++ . ++.|++||..
T Consensus 364 iG~~Ll~~l~~~A~~~G~~~l~v--~--~~~a~~fY~k 397 (429)
T TIGR01890 364 RGERLLAHIEDRARQMGISRLFV--L--TTRTGHWFRE 397 (429)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEE--e--ecchHHHHHH
Confidence 9999999999 999999997653 2 3456788863
No 100
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=97.64 E-value=0.00015 Score=75.91 Aligned_cols=86 Identities=16% Similarity=0.185 Sum_probs=68.5
Q ss_pred cEEEEEEECCeEEEEEEEEE-ec--cccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHH
Q psy3403 419 KFCFLAMDEQKCVGAIVCKL-DI--HRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPA 495 (511)
Q Consensus 419 ~~~fVA~ddGeLVG~a~l~~-~~--~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~A 495 (511)
...++.+.+.++++.+.... .. ..+.-+.+.|..++++|+|||+|..++|+.+.++...+.|.....|+ +..
T Consensus 39 ~n~~vi~~nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~-----P~s 113 (389)
T COG4552 39 PNSYVIYMNQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALH-----PFS 113 (389)
T ss_pred CcceEEeehhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEec-----cCc
Confidence 45778888888888776532 11 12344568899999999999999999999999999999999877775 335
Q ss_pred HHHHHHCCCEEeeE
Q psy3403 496 LKLYENLGFVRDKR 509 (511)
Q Consensus 496 ikFYEKlGFe~vG~ 509 (511)
.+||+|+||+.-+.
T Consensus 114 ~~iYrKfGye~asn 127 (389)
T COG4552 114 GGIYRKFGYEYASN 127 (389)
T ss_pred hhhHhhccccccce
Confidence 89999999997654
No 101
>PRK05279 N-acetylglutamate synthase; Validated
Probab=97.62 E-value=0.00011 Score=78.86 Aligned_cols=102 Identities=7% Similarity=-0.076 Sum_probs=72.7
Q ss_pred EEeCCCCCChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeEEEE-eCCeEEEEEEeecccCCccceEEecc--------C
Q psy3403 7 YVSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLM-DQLKTINIIENDTATQSIRSALNNTT--------L 77 (511)
Q Consensus 7 y~~~~~e~dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a--------g 77 (511)
+++. ..+|+++|.+|+.....+.+.....+..+..+...|++| .+|++|||+..........++|..++ |
T Consensus 297 IR~a-t~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~va~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~G 375 (441)
T PRK05279 297 LRRA-TIDDVGGILELIRPLEEQGILVRRSREQLEREIDKFTVIERDGLIIGCAALYPFPEEKMGEMACLAVHPDYRGSG 375 (441)
T ss_pred eEeC-CHHHHHHHHHHHHHHHHcCCccccCHHHHhcccCcEEEEEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHcCCC
Confidence 4444 457899999987643222332222244556677778888 89999999865432223358886666 9
Q ss_pred hhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh
Q psy3403 78 VPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 78 ig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
||++||..++ .+++.|+..++|+ |++|++||.
T Consensus 376 iG~~Ll~~l~~~a~~~g~~~l~l~----~~~a~~fY~ 408 (441)
T PRK05279 376 RGERLLKRIEQRARQLGLKRLFVL----TTRTAHWFL 408 (441)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEe----cchHHHHHH
Confidence 9999999999 8889999988875 467999996
No 102
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=97.58 E-value=0.00067 Score=60.90 Aligned_cols=107 Identities=7% Similarity=0.047 Sum_probs=72.5
Q ss_pred CceEEEeCCCCCChh-HHHHHHhhh-CCCCccHHHHHHHHHhC-----CCeEEEE-e--CCeEEEEEEeecc-----cCC
Q psy3403 3 GGIKYVSYKSELQMP-DIIKLIQKD-LSEPYSIYTYRYFIHNW-----PKFCFLM-D--QLKTINIIENDTA-----TQS 67 (511)
Q Consensus 3 ~~i~y~~~~~e~dl~-~I~~l~~~~-LsEpYsi~~yryfl~~w-----P~l~~~A-~--~g~~vG~i~~~~~-----~~~ 67 (511)
..+.+++.. .+|++ .+..+.... ..+|++.-.++-++... +...++| . +|++||++...+. ...
T Consensus 5 ~~~~ir~~~-~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~ 83 (150)
T PLN02706 5 EKFKVRRLE-ISDKSKGFLELLQQLTVVGDVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERKFIRNCG 83 (150)
T ss_pred CceEEeEhh-hcccchHHHHHHHhccCCCCCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEeecccCCC
Confidence 356788885 45565 467766553 23467766666555432 3345666 4 5899999765431 112
Q ss_pred ccceEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh
Q psy3403 68 IRSALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 68 ~rghiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
-.|||..++ |||+.|+..++ ..++.||..+.|+|..+|. +||.
T Consensus 84 ~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~---~~y~ 135 (150)
T PLN02706 84 KVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENK---AFYE 135 (150)
T ss_pred cEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccH---HHHH
Confidence 246765554 99999999999 7788999999999999995 4774
No 103
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=97.54 E-value=0.00062 Score=61.84 Aligned_cols=91 Identities=13% Similarity=0.044 Sum_probs=66.5
Q ss_pred HHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEe
Q psy3403 410 YRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETE 489 (511)
Q Consensus 410 ~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~ 489 (511)
++.+.+......|....+|.+||++.+--....+..-..-|..+.+...|||+|+|++.++++...+. | ...+.+.
T Consensus 28 l~~~w~~~~~~~~~~~~~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~--g--~w~Va~i 103 (143)
T COG5628 28 LETYWRDPVREAWLFRIGGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAW--G--VWQVATV 103 (143)
T ss_pred hhhhhcCcccceeEEEECCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHHHHhh--c--eEEEEEe
Confidence 33444444445666677999999998755444333344557889999999999999999998877664 2 3556677
Q ss_pred cCCHHHHHHHHHCCC
Q psy3403 490 ITNRPALKLYENLGF 504 (511)
Q Consensus 490 ~~N~~AikFYEKlGF 504 (511)
++|.+|+.|+++.-.
T Consensus 104 ~EN~PA~~fwK~~~~ 118 (143)
T COG5628 104 RENTPARAFWKRVAE 118 (143)
T ss_pred ccCChhHHHHHhhhc
Confidence 899999999998643
No 104
>PRK07922 N-acetylglutamate synthase; Validated
Probab=97.50 E-value=0.00074 Score=63.39 Aligned_cols=103 Identities=6% Similarity=-0.024 Sum_probs=69.0
Q ss_pred CceEEEeCCCCCChhHHHHHHhhhCCC-CccHHHHHHHHHhCCCeEEEE--eCCeEEEEEEeecccCCccceEEecc---
Q psy3403 3 GGIKYVSYKSELQMPDIIKLIQKDLSE-PYSIYTYRYFIHNWPKFCFLM--DQLKTINIIENDTATQSIRSALNNTT--- 76 (511)
Q Consensus 3 ~~i~y~~~~~e~dl~~I~~l~~~~LsE-pYsi~~yryfl~~wP~l~~~A--~~g~~vG~i~~~~~~~~~rghiv~~a--- 76 (511)
++|++++. ..+|.+.|.+|....-.+ -+......-++.+.+. +|+| .+|++||+++-.....+ .++|-.++
T Consensus 4 ~~i~iR~a-~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~-~~va~~~~~~iiG~~~~~~~~~~-~~~i~~l~V~p 80 (169)
T PRK07922 4 GAITVRRA-RTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQE-FWVAEHLDGEVVGCGALHVMWED-LAEIRTVAVDP 80 (169)
T ss_pred CCceeecC-CHhhHHHHHHHHHHHhhcCccccchHHHHHhhcCc-EEEEEecCCcEEEEEEEeecCCC-ceEEEEEEECH
Confidence 56788887 445899999988653322 1222222233344444 4555 78899999876652222 36664444
Q ss_pred -----ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh
Q psy3403 77 -----LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 77 -----gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
|||++|+..++ .+++.|+..+++.+. +++||.
T Consensus 81 ~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~-----~~~fY~ 118 (169)
T PRK07922 81 AARGRGVGHAIVERLLDVARELGLSRVFVLTF-----EVEFFA 118 (169)
T ss_pred HHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec-----cHHHHH
Confidence 99999999999 899999999988654 467775
No 105
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=97.49 E-value=0.00032 Score=78.76 Aligned_cols=119 Identities=8% Similarity=-0.019 Sum_probs=81.5
Q ss_pred ceEEEeCCCCCChhHHHHHHhhhC--CCCccHHHHHHHHHhCCCeEEEE-eCCeEEEEEEeecccCCccceEEecc----
Q psy3403 4 GIKYVSYKSELQMPDIIKLIQKDL--SEPYSIYTYRYFIHNWPKFCFLM-DQLKTINIIENDTATQSIRSALNNTT---- 76 (511)
Q Consensus 4 ~i~y~~~~~e~dl~~I~~l~~~~L--sEpYsi~~yryfl~~wP~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a---- 76 (511)
++.+++.. ..|++.|.+|+..-. .+.++. ....+.. +...+||+ .+|++|||++... ..+..+||.+++
T Consensus 463 gm~IR~a~-~~D~~~I~~L~~~~~~~~~~~~~-~~~~l~~-~~~~~~Va~~~g~IVG~~~l~~-~~~~~~~I~~i~V~P~ 538 (614)
T PRK12308 463 GVKVRPAR-LTDIDAIEGMVAYWAGLGENLPR-SRNELVR-DIGSFAVAEHHGEVTGCASLYI-YDSGLAEIRSLGVEAG 538 (614)
T ss_pred CCEEEECC-HHHHHHHHHHHHHHHhhhccccc-CHHHHhc-ccCcEEEEEECCEEEEEEEEEE-cCCCeEEEEEEEECHH
Confidence 56778774 578999999986432 122332 2233443 44667888 8999999998776 333357887766
Q ss_pred ----ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh-cccccCCCCCCCccccccc
Q psy3403 77 ----LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY-NGVTNSNHNDLGSNKLSER 132 (511)
Q Consensus 77 ----gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~-~~~~~~~~~~~~~~~~~~~ 132 (511)
|||++||..++ ..++.|+..++|+++ |++||. .|.......++. +++...
T Consensus 539 ~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~~-----a~~FYek~GF~~~~~~~~~-~~~~~~ 594 (614)
T PRK12308 539 WQVQGQGSALVQYLVEKARQMAIKKVFVLTR-----VPEFFMKQGFSPTSKSLLP-EKVLKD 594 (614)
T ss_pred HcCCCHHHHHHHHHHHHHHHCCCCEEEEeeC-----cHHHHHHCCCEECCcccCC-hHHHHh
Confidence 99999999999 899999999998863 578885 355544445543 444433
No 106
>PRK01346 hypothetical protein; Provisional
Probab=97.47 E-value=0.00055 Score=72.36 Aligned_cols=101 Identities=10% Similarity=0.019 Sum_probs=76.6
Q ss_pred CcCceEEEeCCCCCChhHHHHHHhhhCCCCccHHHHHHHHHhC-CCeEEEE-eCCeEEEEEEeecccC----C--c-cce
Q psy3403 1 MIGGIKYVSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNW-PKFCFLM-DQLKTINIIENDTATQ----S--I-RSA 71 (511)
Q Consensus 1 ~~~~i~y~~~~~e~dl~~I~~l~~~~LsEpYsi~~yryfl~~w-P~l~~~A-~~g~~vG~i~~~~~~~----~--~-rgh 71 (511)
|...+.+++.. ++|+++|.+|....+.++.+......+...+ +.-+++| .+|++||+++....+. + . .++
T Consensus 3 ~~~~~~iR~~~-~~D~~~i~~L~~~~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~~ 81 (411)
T PRK01346 3 RDMAITIRTAT-EEDWPAWFRAAATGFGDSPSDEELEAWRALVEPDRTLGAFDGDEVVGTAGAFDLRLTVPGGAVLPAAG 81 (411)
T ss_pred CCCCceeecCC-HHHHHHHHHHHHHHcCCCCChHHHHHHHHhcCcCCeEEEEECCEEEEEEEEeccccccCCCCccceeE
Confidence 45678888884 6789999999999998765555545554444 4556777 8899999988653221 1 1 367
Q ss_pred EEecc--------ChhhHHHHhhh-hccccCccEEEEEEe
Q psy3403 72 LNNTT--------LVPSNLNSESK-DVEDSNCNITVICHS 102 (511)
Q Consensus 72 iv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr 102 (511)
|..++ |||++||..++ .|++.|+..+.|.+.
T Consensus 82 i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~ 121 (411)
T PRK01346 82 VTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTAS 121 (411)
T ss_pred EEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 77776 99999999999 999999999999854
No 107
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.46 E-value=0.0037 Score=54.62 Aligned_cols=105 Identities=16% Similarity=0.147 Sum_probs=77.8
Q ss_pred eEEEEcCCcCcHHHHHHHHHHhcC-------CCCCHHHHHHHHhc----CCcEEEEEEECCeEEEEEEEEEeccccccce
Q psy3403 379 IKYVSYKSELQMPDIIKLIQKDLS-------EPYSIYTYRYFIHN----WPKFCFLAMDEQKCVGAIVCKLDIHRKVIRR 447 (511)
Q Consensus 379 i~irr~lteeDle~L~eL~~~~f~-------~~~see~~e~~le~----~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~ 447 (511)
+.+....+.++++.+.+++...+. .+...+.+...+.. ..-..+++..+|++||+....... ..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~g~~va~~~~~~~~-----~~ 94 (142)
T PF13480_consen 20 VRFEVATDPADLEAFYELYRESWARRHGGFAPPFSRDFFRDLLRSLAESGRLRLFVLYDGGEPVAFALGFRHG-----GT 94 (142)
T ss_pred EEEEEeCCHHHHHHHHHHHHHHHhhhhCCCCCcchHHHHHHHHHhhccCCCEEEEEEEECCEEEEEEEEEEEC-----CE
Confidence 555554567788888888765432 23445555555542 234567778899999999877643 46
Q ss_pred EEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEE
Q psy3403 448 GYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLET 488 (511)
Q Consensus 448 a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V 488 (511)
.+....+++|+++..++|..|+.+++++|.+.|+..+.+..
T Consensus 95 ~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~ 135 (142)
T PF13480_consen 95 LYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFGG 135 (142)
T ss_pred EEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 77788899999999999999999999999999998877754
No 108
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.35 E-value=0.00056 Score=60.10 Aligned_cols=62 Identities=18% Similarity=0.081 Sum_probs=52.6
Q ss_pred CCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCC
Q psy3403 417 WPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDAD 482 (511)
Q Consensus 417 ~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~ 482 (511)
.....|++.++|..+|++...... .....|.+-+|.+++||||+|+.|+..+++.|++.|.+
T Consensus 13 ~~~~~y~~~~~G~~~~e~~y~~~~----~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~k 74 (99)
T COG2388 13 GENGRYVLTDEGEVIGEATYYDRG----ENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLK 74 (99)
T ss_pred cCceEEEEecCCcEEEEEEEecCC----CCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCe
Confidence 345677888899999998886543 25678999999999999999999999999999998874
No 109
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=97.34 E-value=0.0018 Score=60.96 Aligned_cols=110 Identities=8% Similarity=0.012 Sum_probs=71.0
Q ss_pred ceEEEeCCCCCChhHHHHHHhh--hCCCCcc---------HHHH----HHHHH--hCCCe-EEEE---eCCeEEEEEEee
Q psy3403 4 GIKYVSYKSELQMPDIIKLIQK--DLSEPYS---------IYTY----RYFIH--NWPKF-CFLM---DQLKTINIIEND 62 (511)
Q Consensus 4 ~i~y~~~~~e~dl~~I~~l~~~--~LsEpYs---------i~~y----ryfl~--~wP~l-~~~A---~~g~~vG~i~~~ 62 (511)
.|..++. ..+|.+.+++|+.. +...||. ...+ ..|.. ..+.. .|+. .+|++||+|.-.
T Consensus 17 rl~LR~~-~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~l~ 95 (194)
T PRK10809 17 RLVVRLV-HERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVANFS 95 (194)
T ss_pred cEEEEeC-CHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEEEEE
Confidence 5777887 44688899998764 3332332 2222 22222 23432 2333 378999999854
Q ss_pred cccCC-----ccceEEecc----ChhhHHHHhhh-hc-cccCccEEEEEEeecChhhhHhhhc
Q psy3403 63 TATQS-----IRSALNNTT----LVPSNLNSESK-DV-EDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 63 ~~~~~-----~rghiv~~a----gig~~L~~~~~-~~-~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
....+ ..|+.+..+ |+|+.++..++ .. ...|+..+.++|...|++|++||-.
T Consensus 96 ~~~~~~~~~~eig~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek 158 (194)
T PRK10809 96 NVVRGSFHACYLGYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLAR 158 (194)
T ss_pred eecCCCeeeEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHH
Confidence 31111 124434433 99999999999 44 4589999999999999999999964
No 110
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=97.25 E-value=0.0032 Score=62.66 Aligned_cols=113 Identities=12% Similarity=0.041 Sum_probs=86.4
Q ss_pred eEEEEcCCcCcHHHHHHHHHHhcCCC----CCHHHHHHHHhcCCcEEEEEEEC-CeEEEEEEEEEeccccccceEEEEEE
Q psy3403 379 IKYVSYKSELQMPDIIKLIQKDLSEP----YSIYTYRYFIHNWPKFCFLAMDE-QKCVGAIVCKLDIHRKVIRRGYIAML 453 (511)
Q Consensus 379 i~irr~lteeDle~L~eL~~~~f~~~----~see~~e~~le~~~~~~fVA~dd-GeLVG~a~l~~~~~~~~~~~a~I~~I 453 (511)
+.+++..++++++++.++....|... .....+. .+...+...+.|+.+ |++||.....+.... .....+=+++
T Consensus 3 vvvrrl~dp~el~~~~dV~~~aWg~~d~~~~~~d~i~-al~~~GGlvlgAf~~dg~lVGls~G~pg~r~-g~~y~ySH~~ 80 (266)
T COG3375 3 VVVRRLTDPAELDEAEDVQASAWGSEDRDGAPADTIR-ALRYHGGLVLGAFSADGRLVGLSYGYPGGRG-GSLYLYSHML 80 (266)
T ss_pred eeEEecCCHHHHHHHHHHHHHHhCccccccchHHHHH-HHHhcCCeEEEEEcCCCcEEEEEeccCCcCC-Cceeeeeeeh
Confidence 45678888999999999998887622 2223333 444557888889875 499999988762211 1124455779
Q ss_pred EEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCH
Q psy3403 454 AVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNR 493 (511)
Q Consensus 454 aV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~ 493 (511)
+|.|++|+.|+|-+|-..--++++.+|+..+..+-+|-|.
T Consensus 81 gV~e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfDPl~a 120 (266)
T COG3375 81 GVREEVKGSGLGVALKMKQRERALSMGYTLIAWTFDPLNA 120 (266)
T ss_pred hccccccccchhhhhHHHHHHHHHhcCeeeEEEecccchh
Confidence 9999999999999999999999999999999988888774
No 111
>PRK10514 putative acetyltransferase; Provisional
Probab=97.23 E-value=0.0027 Score=56.45 Aligned_cols=103 Identities=6% Similarity=0.052 Sum_probs=64.6
Q ss_pred eEEEeCCCCCChhHHHHHHhhhC--C----CCccHHHHHHHHHhC-CC-eEEEE--eCCeEEEEEEeecccCCccceEEe
Q psy3403 5 IKYVSYKSELQMPDIIKLIQKDL--S----EPYSIYTYRYFIHNW-PK-FCFLM--DQLKTINIIENDTATQSIRSALNN 74 (511)
Q Consensus 5 i~y~~~~~e~dl~~I~~l~~~~L--s----EpYsi~~yryfl~~w-P~-l~~~A--~~g~~vG~i~~~~~~~~~rghiv~ 74 (511)
+.+++. ..+|++.|.+|....+ . .|+....+...+..| |+ .++++ .+|++||+++-.- ....+..+.
T Consensus 2 ~~ir~~-~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~--~~~~~~~v~ 78 (145)
T PRK10514 2 ISIRRS-RHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLPEAPLWVAVDERDQPVGFMLLSG--GHMEALFVD 78 (145)
T ss_pred ceeeec-chhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhccCceEEEEecCCcEEEEEEEec--CcEeEEEEC
Confidence 446666 4578999999887632 1 233333333333322 21 13444 4899999987432 112233333
Q ss_pred cc----ChhhHHHHhhhhccccCccEEEEEEeecChhhhHhhhc
Q psy3403 75 TT----LVPSNLNSESKDVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 75 ~a----gig~~L~~~~~~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
.. |||++|+..++.. +..+.++|...|++|++||..
T Consensus 79 p~~rgkGig~~Ll~~~~~~----~~~i~~~v~~~N~~a~~~yek 118 (145)
T PRK10514 79 PDVRGCGVGRMLVEHALSL----HPELTTDVNEQNEQAVGFYKK 118 (145)
T ss_pred HHhccCCHHHHHHHHHHHh----ccccEEEeecCCHHHHHHHHH
Confidence 33 9999999998832 346789999999999999963
No 112
>PRK10562 putative acetyltransferase; Provisional
Probab=97.15 E-value=0.0033 Score=56.44 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=63.9
Q ss_pred EeCCCCCChhHHHHHHhhh--CCCCccHHHHH-HH---HHhC--CC-eEEEE-eCCeEEEEEEeecccCCccceE-Eecc
Q psy3403 8 VSYKSELQMPDIIKLIQKD--LSEPYSIYTYR-YF---IHNW--PK-FCFLM-DQLKTINIIENDTATQSIRSAL-NNTT 76 (511)
Q Consensus 8 ~~~~~e~dl~~I~~l~~~~--LsEpYsi~~yr-yf---l~~w--P~-l~~~A-~~g~~vG~i~~~~~~~~~rghi-v~~a 76 (511)
+|+ ..+|++.|.+|.... .+.||...-++ .. +.+| +. .+|++ .+|++||++.-.. . .+.|.+ |...
T Consensus 3 r~~-~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~iG~~~~~~-~-~~i~~~~v~~~ 79 (145)
T PRK10562 3 REY-QPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYLPAAQTWVWEEDGKLLGFVSVLE-G-RFVGALFVAPK 79 (145)
T ss_pred ccc-cchhhHHHHHHHHHhccccCCCCCHHHHHHhHHHhhhhhcCcccEEEEEECCEEEEEEEEee-c-cEEEEEEECHH
Confidence 455 347899999997654 34455322221 11 1111 22 34555 7899999986533 1 112322 2222
Q ss_pred ----ChhhHHHHhhhhccccCccEEEEEEeecChhhhHhhhc-cccc
Q psy3403 77 ----LVPSNLNSESKDVEDSNCNITVICHSYDNTQSQDILYN-GVTN 118 (511)
Q Consensus 77 ----gig~~L~~~~~~~~~~~~~ev~LEvr~sN~~A~~l~~~-~~~~ 118 (511)
|+|++|+..++. .+..+.|+|...|++|++||-. |.+.
T Consensus 80 ~rg~G~g~~ll~~~~~----~~~~~~~~v~~~N~~s~~~y~k~Gf~~ 122 (145)
T PRK10562 80 AVRRGIGKALMQHVQQ----RYPHLSLEVYQKNQRAVNFYHAQGFRI 122 (145)
T ss_pred HcCCCHHHHHHHHHHh----hCCeEEEEEEcCChHHHHHHHHCCCEE
Confidence 999999998873 1346889999999999999964 4443
No 113
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=97.11 E-value=0.0039 Score=71.43 Aligned_cols=100 Identities=19% Similarity=0.105 Sum_probs=70.9
Q ss_pred CHHHHHHHHhcCCcEEEEEEECC-eEEEEEEEEEeccc-------------c-------------------ccceEEEEE
Q psy3403 406 SIYTYRYFIHNWPKFCFLAMDEQ-KCVGAIVCKLDIHR-------------K-------------------VIRRGYIAM 452 (511)
Q Consensus 406 see~~e~~le~~~~~~fVA~ddG-eLVG~a~l~~~~~~-------------~-------------------~~~~a~I~~ 452 (511)
++.++...++......+++..++ .+|+.+.+...... . .-.-..|-.
T Consensus 457 sP~DL~~L~DaP~h~~~al~~~~~~~va~~qva~EG~l~~~~i~~~~~g~r~~GnlIp~~l~~~~~~~~fa~l~G~RIvR 536 (758)
T COG1444 457 SPNDLRRLLDAPHHHIFALRAPEGKPVAVWQVAEEGGLSDELIDIWLGGRRPRGNLIPDLLAKHHRDPEFAKLVGWRIVR 536 (758)
T ss_pred CHHHHHHHhcCCCCeeEEEEcCCCceEEEEEeeccCCCcHHHHHHHhcCCCCCCcccHHHHHHhhcchhhcccceeeEEE
Confidence 45667777777677788887766 77777765432211 0 011256889
Q ss_pred EEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEE-ecCCHHHHHHHHHCCCEEee
Q psy3403 453 LAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLET-EITNRPALKLYENLGFVRDK 508 (511)
Q Consensus 453 IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V-~~~N~~AikFYEKlGFe~vG 508 (511)
|+|+|++|++|||++|++.+.++|+ .|+. ++.+ .-.++.-.+||.|+||.++.
T Consensus 537 IAvhPe~q~~GiGsrlL~~l~~~a~-~~~D--wlgvsFG~t~~L~rFW~rnGF~pVh 590 (758)
T COG1444 537 IAVHPELQRMGIGSRLLALLIEEAR-KGLD--WLGVSFGYTEELLRFWLRNGFVPVH 590 (758)
T ss_pred EEeCHHHHhcCHHHHHHHHHHHHHh-cCCC--EEeeccCCCHHHHHHHHHcCeEEEE
Confidence 9999999999999999999999996 3444 2332 22347789999999999875
No 114
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=97.06 E-value=0.0048 Score=57.22 Aligned_cols=111 Identities=13% Similarity=0.086 Sum_probs=75.2
Q ss_pred CceEEEeCCCCCChhHHHHHHh--hh-----C---CCCccHHHHHHHHHh----CCC---eEEEE-eCCeEEEEEEeecc
Q psy3403 3 GGIKYVSYKSELQMPDIIKLIQ--KD-----L---SEPYSIYTYRYFIHN----WPK---FCFLM-DQLKTINIIENDTA 64 (511)
Q Consensus 3 ~~i~y~~~~~e~dl~~I~~l~~--~~-----L---sEpYsi~~yryfl~~----wP~---l~~~A-~~g~~vG~i~~~~~ 64 (511)
+.++.+|.. ++|++.+.++.. .. + ..|++....+-++.. |.+ .+|++ .+|++||+|--...
T Consensus 9 ~rl~Lr~~~-~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~l~~~ 87 (179)
T PRK10151 9 ESLELHAVD-ESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVLSFNRI 87 (179)
T ss_pred CcEEEEeCC-HHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECCEEEEEEEEEee
Confidence 467888884 578888888862 21 1 122454544555544 332 24555 79999999853321
Q ss_pred cC----CccceEEecc----ChhhHHHHhhh-hccc-cCccEEEEEEeecChhhhHhhhc
Q psy3403 65 TQ----SIRSALNNTT----LVPSNLNSESK-DVED-SNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 65 ~~----~~rghiv~~a----gig~~L~~~~~-~~~~-~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
.. ..-|+.+... |+|+.++.+++ .+.+ .|...+.++|.+.|.+|+++|..
T Consensus 88 ~~~~~~~~ig~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek 147 (179)
T PRK10151 88 EPLNKTAYIGYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALR 147 (179)
T ss_pred ccCCCceEEEEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHH
Confidence 11 1135545444 99999999999 5654 78999999999999999999864
No 115
>PRK09831 putative acyltransferase; Provisional
Probab=97.01 E-value=0.0013 Score=59.39 Aligned_cols=91 Identities=8% Similarity=0.050 Sum_probs=58.5
Q ss_pred EEeCCCCCChhHHHHHHhhhCCC----CccHHH-----------HHHHHHhCCCeEEEE-eCCeEEEEEEeecccCCccc
Q psy3403 7 YVSYKSELQMPDIIKLIQKDLSE----PYSIYT-----------YRYFIHNWPKFCFLM-DQLKTINIIENDTATQSIRS 70 (511)
Q Consensus 7 y~~~~~e~dl~~I~~l~~~~LsE----pYsi~~-----------yryfl~~wP~l~~~A-~~g~~vG~i~~~~~~~~~rg 70 (511)
+++. .+.|++.|.+|....+.+ +|+... |...+. ...++|| .+|++||+++... +
T Consensus 3 ir~a-~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~iiG~~~~~~------~ 73 (147)
T PRK09831 3 IRNY-QPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLA--KSQVRVAVINAQPVGFITCIE------H 73 (147)
T ss_pred cccC-ChhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHh--cCceEEEEECCEEEEEEEehh------c
Confidence 3444 457888998887765432 344321 122222 2457788 8999999987532 4
Q ss_pred eEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 71 ALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 71 hiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
+|..+. |||++||..++ ..+. |.|. +|.+|++||..
T Consensus 74 ~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-------l~v~-~~~~a~~~Y~k 118 (147)
T PRK09831 74 YIDMLFVDPEYTRRGVASALLKPLIKSESE-------LTVD-ASITAKPFFER 118 (147)
T ss_pred eeeeEEECHHHcCCCHHHHHHHHHHHHhhh-------eEee-cchhhHHHHHH
Confidence 443333 99999999998 4332 5664 46899999974
No 116
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=96.96 E-value=0.0045 Score=63.79 Aligned_cols=78 Identities=14% Similarity=0.173 Sum_probs=64.7
Q ss_pred cEEEEEEE-CCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHH
Q psy3403 419 KFCFLAMD-EQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALK 497 (511)
Q Consensus 419 ~~~fVA~d-dGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~Aik 497 (511)
+.+.+++. ++++|+...+.- -.|--++|+|.+||-|++-+|+.+++..+.++|...+++.+.+.+ ..
T Consensus 36 e~~v~~~~~~~~iiacGsiaG---------nvikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~---~~ 103 (352)
T COG3053 36 EYFVAIYRDNEEIIACGSIAG---------NVIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEY---AA 103 (352)
T ss_pred eEEEEEEcCCCcEEEeccccc---------ceeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhH---HH
Confidence 34444454 489999887642 236679999999999999999999999999999999999998666 79
Q ss_pred HHHHCCCEEee
Q psy3403 498 LYENLGFVRDK 508 (511)
Q Consensus 498 FYEKlGFe~vG 508 (511)
||+.+||....
T Consensus 104 lFk~~GF~~i~ 114 (352)
T COG3053 104 LFKQCGFSEIA 114 (352)
T ss_pred HHHhCCceEee
Confidence 99999998764
No 117
>KOG3216|consensus
Probab=96.94 E-value=0.008 Score=56.78 Aligned_cols=110 Identities=12% Similarity=-0.023 Sum_probs=82.3
Q ss_pred CceEEEeCCCCCChhHHHHHHhh-----hCCCCc--cHHHHHH--HHHhCCCeEEEE-e---CCeEEEEEEeecccCCcc
Q psy3403 3 GGIKYVSYKSELQMPDIIKLIQK-----DLSEPY--SIYTYRY--FIHNWPKFCFLM-D---QLKTINIIENDTATQSIR 69 (511)
Q Consensus 3 ~~i~y~~~~~e~dl~~I~~l~~~-----~LsEpY--si~~yry--fl~~wP~l~~~A-~---~g~~vG~i~~~~~~~~~r 69 (511)
+.|+.++- .+.|.++|.+||.. .+++|- +...++- |+.+==..|++| . ++.+||+++=.-+-.+|.
T Consensus 2 ~~~~IR~a-t~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~ 80 (163)
T KOG3216|consen 2 DNIRIRLA-TPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWL 80 (163)
T ss_pred CceEEEec-CcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeeccccccc
Confidence 34555544 56789999999874 234453 4455555 777766788887 5 889999999888656776
Q ss_pred c----eEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh
Q psy3403 70 S----ALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 70 g----hiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
| |+-.+= |||+.|+...- .-.+.||.-|+.-|--.|.+||.||-
T Consensus 81 ~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~ 137 (163)
T KOG3216|consen 81 GKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYE 137 (163)
T ss_pred ccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHH
Confidence 6 333332 99999998877 55559999999999999999999995
No 118
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=96.73 E-value=0.0039 Score=59.81 Aligned_cols=89 Identities=12% Similarity=0.056 Sum_probs=65.1
Q ss_pred CCCCChhHHHHHHhhhCC---CCccHHHHHHHHHhCCCeEEEE-eCCeEEEEEE-eecccC--CccceE---Eecc----
Q psy3403 11 KSELQMPDIIKLIQKDLS---EPYSIYTYRYFIHNWPKFCFLM-DQLKTINIIE-NDTATQ--SIRSAL---NNTT---- 76 (511)
Q Consensus 11 ~~e~dl~~I~~l~~~~Ls---EpYsi~~yryfl~~wP~l~~~A-~~g~~vG~i~-~~~~~~--~~rghi---v~~a---- 76 (511)
....|.+.|-+|++..|- |-+++..-|--..--+.|.||| ++|++||.|+ +++.-. .+.++. .++.
T Consensus 9 e~~~d~~~i~~~~~~aF~~~~e~~~v~~lR~~~~~~~~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaPLaV~p~~q 88 (171)
T COG3153 9 ETPADIPAIEALTREAFGPGREAKLVDKLREGGRPDLTLSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAPLAVDPEYQ 88 (171)
T ss_pred cChhhHHHHHHHHHHHhhcchHHHHHHHHHhcCCcccceeEEEeeCCEEEEEEEEeEEEecCcccceEEEEeEEEchhhc
Confidence 356789999999999997 3344444444444456899999 8899999986 455222 223444 2333
Q ss_pred --ChhhHHHHhhh-hccccCccEEEE
Q psy3403 77 --LVPSNLNSESK-DVEDSNCNITVI 99 (511)
Q Consensus 77 --gig~~L~~~~~-~~~~~~~~ev~L 99 (511)
|||++||.+++ .++..|+.-|++
T Consensus 89 g~GIG~~Lvr~~le~a~~~G~~~v~v 114 (171)
T COG3153 89 GQGIGSALVREGLEALRLAGASAVVV 114 (171)
T ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEE
Confidence 99999999999 999999988875
No 119
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=96.70 E-value=0.038 Score=53.59 Aligned_cols=126 Identities=12% Similarity=0.147 Sum_probs=77.1
Q ss_pred eEEEEcCCcCcHHHHHHHHHHhcCCCCCHHHHHHHHhcCCc-EE-EEEE--ECCeEEEEEEEEEecc---ccccceEEEE
Q psy3403 379 IKYVSYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPK-FC-FLAM--DEQKCVGAIVCKLDIH---RKVIRRGYIA 451 (511)
Q Consensus 379 i~irr~lteeDle~L~eL~~~~f~~~~see~~e~~le~~~~-~~-fVA~--ddGeLVG~a~l~~~~~---~~~~~~a~I~ 451 (511)
+.++.-..++.++++..+.... ...+..+++..|....++ .. +++. ...++|+.+.+..... ....+..+++
T Consensus 4 vdvv~NP~~e~~d~fmk~~g~~-r~~Fk~~Di~~wk~sf~~~Y~l~~~~~KgT~~via~~~~~~~~~l~~~~d~pl~~~G 82 (181)
T PF06852_consen 4 VDVVINPPQEYFDQFMKLHGNE-RWNFKRNDIKLWKESFDDDYWLVLTCLKGTDRVIATVHLIRFDPLNPSPDKPLQFIG 82 (181)
T ss_pred eEEEeCCCHHHHHHHHHHhcCC-cccccHHHHHHHHHhhccCeEEEEEEEcCCCcEEEEEEEEEeccCCCCCCCCeEEEe
Confidence 3344334555677777776442 344555777777766655 32 2233 3467888887643221 1125678999
Q ss_pred EEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHH-CCCEEeeE
Q psy3403 452 MLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYEN-LGFVRDKR 509 (511)
Q Consensus 452 ~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEK-lGFe~vG~ 509 (511)
.++++|+|||+|+++.+-..+.+..+..+ ....+. .+..+.++|.+ +||...+.
T Consensus 83 ~~w~~p~yRg~~~~kl~~~~~~~~~~~~~-~N~~~~---~~~~~~~~w~k~~G~~~~~h 137 (181)
T PF06852_consen 83 FFWIDPEYRGKGIMKLQDDICMDELDSVD-DNSVAQ---GNVKMSNFWHKMFGFDDYGH 137 (181)
T ss_pred eeeeCCcccCcchHHHHHHHHHHHhccCC-Cceeee---cCHHHHHHHHHHhCCCCCcc
Confidence 99999999999999754444445554433 334443 34678888886 78765543
No 120
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=96.39 E-value=0.091 Score=50.71 Aligned_cols=117 Identities=10% Similarity=0.140 Sum_probs=80.5
Q ss_pred CcHHHHHHHHHHhcC--CCCCHHHHH----HHHhcCCcEEEEEEECCeEEEEEEEEEeccc-----------------cc
Q psy3403 388 LQMPDIIKLIQKDLS--EPYSIYTYR----YFIHNWPKFCFLAMDEQKCVGAIVCKLDIHR-----------------KV 444 (511)
Q Consensus 388 eDle~L~eL~~~~f~--~~~see~~e----~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~-----------------~~ 444 (511)
++++++..+-.+.|. -.|...... +.+......++++.++|+++|.+.+.+.... ..
T Consensus 8 ~~l~~~~rlR~~vFv~rlgW~v~~~dg~E~DqyD~~~~~ylv~~~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~ 87 (182)
T PF00765_consen 8 RLLEEMFRLRHRVFVDRLGWDVPCEDGMEIDQYDDPDAVYLVALDDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRS 87 (182)
T ss_dssp HHHHHHHHHHHHHHTTCSCCCHHCCTSEE--TTGCTT-EEEEEEETTEEEEEEEEEETTS--HHHHCTGGGHTTS---SS
T ss_pred HHHHHHHHHHHHHHHHhhCCCCcCCCCcEeeecCCCCCeEEEEEECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCC
Confidence 456677777777775 245432111 1122334567788889999999998653321 12
Q ss_pred cceEEEEEEEEccCccC------CcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEe
Q psy3403 445 IRRGYIAMLAVDENYRK------RKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRD 507 (511)
Q Consensus 445 ~~~a~I~~IaV~PeyRG------QGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~v 507 (511)
....++..++|+++.++ .-+...|+..++++|.++|+..++..+. .+..+++++.||...
T Consensus 88 ~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~~~v~V~~---~~~~r~l~r~G~~~~ 153 (182)
T PF00765_consen 88 PDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIRHIVGVVD---PAMERILRRAGWPVR 153 (182)
T ss_dssp TTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-SEEEEEEE---HHHHHHHHHCT-EEE
T ss_pred CcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCCEEEEEEC---hHHHHHHHHcCCceE
Confidence 45688999999998532 2477899999999999999999988887 778999999999865
No 121
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=96.23 E-value=0.03 Score=48.94 Aligned_cols=109 Identities=12% Similarity=0.106 Sum_probs=69.7
Q ss_pred eEEEeCCCCCChhHHHHHHhh-hC------CCC-ccHHHHHHHHH----hCCC---eEEEE-e--CCeEEEEEEeecc-c
Q psy3403 5 IKYVSYKSELQMPDIIKLIQK-DL------SEP-YSIYTYRYFIH----NWPK---FCFLM-D--QLKTINIIENDTA-T 65 (511)
Q Consensus 5 i~y~~~~~e~dl~~I~~l~~~-~L------sEp-Ysi~~yryfl~----~wP~---l~~~A-~--~g~~vG~i~~~~~-~ 65 (511)
|..+|. .++|++.|+++... +. ..+ ++....+-++. .|+. .+|++ . ++++||+|--... .
T Consensus 2 l~lr~~-~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~~ 80 (142)
T PF13302_consen 2 LTLRPL-TPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNIDK 80 (142)
T ss_dssp EEEEE--HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEET
T ss_pred EEEEcC-CHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeeccc
Confidence 566777 45689999988851 21 222 25444333443 2654 23444 3 4579999877331 1
Q ss_pred CCc---cceEEecc----ChhhHHHHhhh-hc-cccCccEEEEEEeecChhhhHhhhc
Q psy3403 66 QSI---RSALNNTT----LVPSNLNSESK-DV-EDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 66 ~~~---rghiv~~a----gig~~L~~~~~-~~-~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
..- -|+.+... |+|+.++..++ -+ +..|+..++..|...|++|++++..
T Consensus 81 ~~~~~eig~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k 138 (142)
T PF13302_consen 81 NNNWAEIGYWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEK 138 (142)
T ss_dssp TTTEEEEEEEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHH
T ss_pred CCCccccccchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHH
Confidence 111 23333333 99999999999 55 6799999999999999999999863
No 122
>PRK10314 putative acyltransferase; Provisional
Probab=96.11 E-value=0.013 Score=54.33 Aligned_cols=107 Identities=8% Similarity=-0.018 Sum_probs=68.3
Q ss_pred ceEEEeCC--CCCChhHHHHHHhhhCCCCccHHHHHHHH-HhC-C-CeEEEE-eCCeEEEEEEeecccCCc-cceEEecc
Q psy3403 4 GIKYVSYK--SELQMPDIIKLIQKDLSEPYSIYTYRYFI-HNW-P-KFCFLM-DQLKTINIIENDTATQSI-RSALNNTT 76 (511)
Q Consensus 4 ~i~y~~~~--~e~dl~~I~~l~~~~LsEpYsi~~yryfl-~~w-P-~l~~~A-~~g~~vG~i~~~~~~~~~-rghiv~~a 76 (511)
.+++.++. +..++.+++.|=...|-++..+- |..+- ... | ...++| .+|++|||+.......+. .++|-.++
T Consensus 3 ~~~~~~~~~l~~~~~~~~~~lR~~VF~~eq~~~-~~e~D~~d~~~~~~h~~~~~~~~~vg~~r~~~~~~~~~~~~i~rv~ 81 (153)
T PRK10314 3 EWQDLHHSELSVSQLYALLQLRCAVFVVEQNCP-YQDIDGDDLTGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVI 81 (153)
T ss_pred eeEecchhhCCHHHHHHHHHHHHHHhhhhcCCC-ccccCCCCCCCCcEEEEEEECCEEEEEEEEecCCCCCCCEEEEEEE
Confidence 34555552 23567788888777775442221 11111 112 2 445666 799999997766532221 24554444
Q ss_pred --------ChhhHHHHhhh-hccc-cCccEEEEEEeecChhhhHhhhc
Q psy3403 77 --------LVPSNLNSESK-DVED-SNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 77 --------gig~~L~~~~~-~~~~-~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
|||++||..++ .++. .+...++|.+ ++.|++||..
T Consensus 82 V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a---~~~a~~fY~k 126 (153)
T PRK10314 82 VSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGA---QAHLQNFYQS 126 (153)
T ss_pred ECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEeh---HHHHHHHHHH
Confidence 99999999999 7777 5788899986 5789999963
No 123
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=96.09 E-value=0.068 Score=53.60 Aligned_cols=125 Identities=16% Similarity=0.090 Sum_probs=82.8
Q ss_pred EEEEcCCcCcHHHHHHHHHHhcC--CCCCH-----HHHHHHHhcCCcEEEEEEE--CCeEEEEEEEEEec----------
Q psy3403 380 KYVSYKSELQMPDIIKLIQKDLS--EPYSI-----YTYRYFIHNWPKFCFLAMD--EQKCVGAIVCKLDI---------- 440 (511)
Q Consensus 380 ~irr~lteeDle~L~eL~~~~f~--~~~se-----e~~e~~le~~~~~~fVA~d--dGeLVG~a~l~~~~---------- 440 (511)
.+....+.++++++..+-.+.|- -.|.. +..+..-.......+++.+ +|++||++.+....
T Consensus 9 ~v~~a~~~~~~~~~~~lR~~VFv~e~gw~~~~~~~~~~E~D~~D~~~~h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~p~ 88 (241)
T TIGR03694 9 EIIPAVTPELLEEAFRLRYQVYCEELGFEPPSDYPDGLETDEYDAHSVHSLLRHRRTGTFVGCVRLVLPNSSDPDQPFPF 88 (241)
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCCCCcEEEEEECCCCCEEEEEEEeccccccccccccH
Confidence 34444456667888888777764 22321 1111110112344455543 58999999886521
Q ss_pred --cc--------------cccceEEEEEEEEccCccCC--------c--------------------HHHHHHHHHHHHH
Q psy3403 441 --HR--------------KVIRRGYIAMLAVDENYRKR--------K--------------------IGSNLVLKAIRAM 476 (511)
Q Consensus 441 --~~--------------~~~~~a~I~~IaV~PeyRGQ--------G--------------------IGraLL~aLie~A 476 (511)
.. .....+++..++|+|+||++ | +...|+..+++++
T Consensus 89 e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a 168 (241)
T TIGR03694 89 EKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALS 168 (241)
T ss_pred HHHhccccchhhcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHH
Confidence 00 11356889999999999974 2 5678999999999
Q ss_pred HHCCCCEEEEEEecCCHHHHHHHHHCCCEEe
Q psy3403 477 VADDADEVVLETEITNRPALKLYENLGFVRD 507 (511)
Q Consensus 477 re~G~~rI~L~V~~~N~~AikFYEKlGFe~v 507 (511)
...|++.++..+. ....++++++|+...
T Consensus 169 ~~~Gi~~~~~v~~---~~l~r~l~r~G~~~~ 196 (241)
T TIGR03694 169 SANGITHWYAIME---PRLARLLSRFGIQFR 196 (241)
T ss_pred HHCCCcEEEEEeC---HHHHHHHHHhCCceE
Confidence 9999999888877 467889999998653
No 124
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=95.92 E-value=0.099 Score=53.96 Aligned_cols=125 Identities=8% Similarity=0.038 Sum_probs=89.8
Q ss_pred ceEEEEcCCcCcHHHHHHHHHHhcC----CCCCHHHHHHHHhcC--CcEEEEEE-ECCeEEEEEEEEEeccccccceEEE
Q psy3403 378 GIKYVSYKSELQMPDIIKLIQKDLS----EPYSIYTYRYFIHNW--PKFCFLAM-DEQKCVGAIVCKLDIHRKVIRRGYI 450 (511)
Q Consensus 378 ~i~irr~lteeDle~L~eL~~~~f~----~~~see~~e~~le~~--~~~~fVA~-ddGeLVG~a~l~~~~~~~~~~~a~I 450 (511)
+++++. .+|++.+.++....+. ..++.+.++..++.. ....+++. .+|++||.+.+.... ...+.
T Consensus 151 Gv~v~~---~~~l~~F~~l~~~t~~r~g~p~~~~~~f~~l~~~~~~~~~l~~a~~~~g~~va~~l~~~~~-----~~~~~ 222 (330)
T TIGR03019 151 GLTVTV---DGDLDRFYDVYAENMRDLGTPVFSRRYFRLLKDVFGEDCEVLTVRLGDGVVASAVLSFYFR-----DEVLP 222 (330)
T ss_pred CeEEEE---CCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHhcccCEEEEEEEeCCCCEEEEEEEEEeC-----CEEEE
Confidence 455543 3468888888776443 456777777665432 23345666 689999887765432 23333
Q ss_pred EEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeEe
Q psy3403 451 AMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKRL 510 (511)
Q Consensus 451 ~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~L 510 (511)
...+.++++|+.+-+..|+-+++++|.+.|+....+.....+....+|=++.||+.+...
T Consensus 223 ~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~FK~~~G~~~~~l~ 282 (330)
T TIGR03019 223 YYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKFKKNWGFEPQPLH 282 (330)
T ss_pred EeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHHHHhcCCCeeccce
Confidence 345678999999999999999999999999999998876556677788889999987544
No 125
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=95.60 E-value=0.054 Score=43.73 Aligned_cols=61 Identities=10% Similarity=0.025 Sum_probs=44.5
Q ss_pred CeEEEE-eCCeEEEEEEeecccCCccceEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh
Q psy3403 45 KFCFLM-DQLKTINIIENDTATQSIRSALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 45 ~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
+.+|++ .+|++||++...-.+. ...|..++ |||+.||..++ .++. ..++|.. |+.|+++|.
T Consensus 3 ~~~~~~~~~~~ivG~~~~~~~~~--~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~---~~~~~~fY~ 73 (79)
T PF13508_consen 3 ERFFVAEDDGEIVGFIRLWPNED--FAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFT---NPAAIKFYE 73 (79)
T ss_dssp EEEEEEEETTEEEEEEEEEETTT--EEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEE---EHHHHHHHH
T ss_pred cEEEEEEECCEEEEEEEEEEcCC--EEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEE---cHHHHHHHH
Confidence 356777 9999999999866333 23454444 99999999998 6644 4466665 678999986
No 126
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=95.40 E-value=0.036 Score=57.40 Aligned_cols=58 Identities=10% Similarity=-0.025 Sum_probs=45.1
Q ss_pred EEEE-eCCeEEEEEEeecccCCccceEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh
Q psy3403 47 CFLM-DQLKTINIIENDTATQSIRSALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 47 ~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
++++ ++|++||+.... .+.|-++| |||++||.+++ .+++.|+..++|+++.+| ++||.
T Consensus 8 ~~v~~~~~~iVG~~~l~------~~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~---~~fYe 75 (297)
T cd02169 8 VGIFDDAGELIATGSIA------GNVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKN---AKFFR 75 (297)
T ss_pred EEEEEECCEEEEEEEec------cCEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccH---HHHHH
Confidence 4555 679999975432 24565555 99999999999 999999999999997654 57885
No 127
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=95.20 E-value=0.6 Score=44.63 Aligned_cols=111 Identities=16% Similarity=0.248 Sum_probs=71.6
Q ss_pred cceEEE--EcCCcCcHHHHHHHHHHhcC--------CCCCHHHHHHHHhcC---CcEEEEEE--ECCeEEEEEEEEEec-
Q psy3403 377 GGIKYV--SYKSELQMPDIIKLIQKDLS--------EPYSIYTYRYFIHNW---PKFCFLAM--DEQKCVGAIVCKLDI- 440 (511)
Q Consensus 377 ~~i~ir--r~lteeDle~L~eL~~~~f~--------~~~see~~e~~le~~---~~~~fVA~--ddGeLVG~a~l~~~~- 440 (511)
.++... ...++++++++.+++...|- -.|+.+.+.-.+... .++.+.+. ..+++|||+...+..
T Consensus 22 ~gF~W~~~dl~d~~~l~ely~lL~~nYVEDdd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~~~~~kLvgfIsaip~~i 101 (162)
T PF01233_consen 22 DGFEWSTLDLNDDEELKELYELLNENYVEDDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRVKSSKKLVGFISAIPATI 101 (162)
T ss_dssp TTEEEEE--TTSHHHHHHHHHHHHHHSSBTTTSSEEE---HHHHHHHHTSTT--GGGEEEEEETTTTEEEEEEEEEEEEE
T ss_pred CCCEEEecCCCCHHHHHHHHHHHHhcCccCCcceEEeeCCHHHHhheeeCcCCccceEEEEEECCCCEEEEEEccceEEE
Confidence 445444 33456677888888887663 345555554444322 23344443 379999999875422
Q ss_pred --cccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEE
Q psy3403 441 --HRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLE 487 (511)
Q Consensus 441 --~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~ 487 (511)
.......++|-.+.|+++.|.++++-.|++++.+.+...|+-...-.
T Consensus 102 rv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~qAvyT 150 (162)
T PF01233_consen 102 RVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQAVYT 150 (162)
T ss_dssp EETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EEEEE
T ss_pred EEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCceeeeee
Confidence 22234568899999999999999999999999999998887655443
No 128
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.15 E-value=0.064 Score=58.84 Aligned_cols=124 Identities=16% Similarity=0.216 Sum_probs=92.3
Q ss_pred eEEEEcCCcCcHHHHHHHHHHhcC-----CCCCHHHHHHHHhcCCcEEEEEE-----ECCeEEEEEEEEEeccccccceE
Q psy3403 379 IKYVSYKSELQMPDIIKLIQKDLS-----EPYSIYTYRYFIHNWPKFCFLAM-----DEQKCVGAIVCKLDIHRKVIRRG 448 (511)
Q Consensus 379 i~irr~lteeDle~L~eL~~~~f~-----~~~see~~e~~le~~~~~~fVA~-----ddGeLVG~a~l~~~~~~~~~~~a 448 (511)
+++. ..++.+++.+.+|....-+ ..|.++++....+......|-.. .|.-+||++.+.... ...
T Consensus 414 l~vs-~~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~kk~-----~~w 487 (574)
T COG3882 414 LTVS-KFDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEKKE-----SEW 487 (574)
T ss_pred EEEe-eccccCcHHHHHHhhcccceeechhhhcHHHHHHHhhCCCeEEEEEEeccccccCceEEEEEEEecC-----CeE
Confidence 4444 4688899999999876432 56777888776554444433332 256699998886533 446
Q ss_pred EEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEE--ecCCHHHHHHHHHCCCEEee
Q psy3403 449 YIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLET--EITNRPALKLYENLGFVRDK 508 (511)
Q Consensus 449 ~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V--~~~N~~AikFYEKlGFe~vG 508 (511)
.|..+...-.-=||+|-.+||..+.+.|+..|+..++..- ...|.+.-.||+++||+..+
T Consensus 488 ~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~FyE~mgf~l~~ 549 (574)
T COG3882 488 FIDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNAPVSDFYERMGFKLKG 549 (574)
T ss_pred EhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecccccCCcHHHHHHHhcccccc
Confidence 6766666666779999999999999999999999998875 44789999999999999654
No 129
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=94.88 E-value=0.032 Score=60.71 Aligned_cols=51 Identities=20% Similarity=0.379 Sum_probs=44.3
Q ss_pred ccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 456 DENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 456 ~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
..+||+||+|+.||+++.+.|++.+..+|.+..- ..++..|+|+||+..|-
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSg---iG~ReYy~k~GY~~~gp 509 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREEGAKKILVISG---IGVREYYRKLGYELDGP 509 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhhccccEEEEec---ccHHHHHHHhCccccCC
Confidence 5789999999999999999999988887766543 67899999999998763
No 130
>PRK13688 hypothetical protein; Provisional
Probab=94.88 E-value=0.042 Score=51.55 Aligned_cols=97 Identities=12% Similarity=-0.019 Sum_probs=56.1
Q ss_pred eCCCCCChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeE-EEE-eCCeEEEEEEeecccCC---------ccceEEecc-
Q psy3403 9 SYKSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFC-FLM-DQLKTINIIENDTATQS---------IRSALNNTT- 76 (511)
Q Consensus 9 ~~~~e~dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~-~~A-~~g~~vG~i~~~~~~~~---------~rghiv~~a- 76 (511)
.|+.-+++..|..+...+|++=+.+-. .+| ..|++.. |++ +++++||++.-...... --++|-.++
T Consensus 10 ~~~~~~~~~~~~~~~~~dl~~l~~l~~-~~f-~~~~~~~~~~~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V 87 (156)
T PRK13688 10 NYKTLEEFKKFREFGNQELSMLEELQA-NII-ENDSESPFYGIYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEV 87 (156)
T ss_pred cchhHHHHHHHHHhcHHHHHHHHhhhh-hEe-ecCCCCCEEEEEECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEE
Confidence 444444455555555555555444444 334 4555544 556 89999998865431111 124565555
Q ss_pred -------ChhhHHHHhhhhccccCccEEEEEEeecChhhhHhhhc
Q psy3403 77 -------LVPSNLNSESKDVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 77 -------gig~~L~~~~~~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
|||++|+..+..+ ++. +.+...| .|++||..
T Consensus 88 ~p~~rgkGiG~~Ll~~a~~~---~~~---~~~~~~~-~a~~FY~k 125 (156)
T PRK13688 88 LPKYQNRGYGEMLVDFAKSF---QLP---IKTIARN-KSKDFWLK 125 (156)
T ss_pred CHHHcCCCHHHHHHHHHHHh---CCe---EEEEecc-chHHHHHh
Confidence 9999999876532 222 3444555 58899985
No 131
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=94.85 E-value=0.065 Score=45.21 Aligned_cols=61 Identities=8% Similarity=-0.005 Sum_probs=42.5
Q ss_pred eCCeEEEEEEeecccCCccceEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 51 DQLKTINIIENDTATQSIRSALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 51 ~~g~~vG~i~~~~~~~~~rghiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
++|+.+-.+...+ .... |+|..+. |+|++|+...+ .+++.|- .++|-|..+|++|++||-.
T Consensus 5 f~~~~~~l~~~~~-~~~~-g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~-~~~l~v~~~N~~s~~ly~k 74 (86)
T PF08445_consen 5 FDGELVALVAWII-RSDD-GEIGGVYTLPEHRRRGLGSALVAALARELLERGK-TPFLYVDADNEASIRLYEK 74 (86)
T ss_dssp ECTCCEEEEEEEE-ESCT-CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTS-EEEEEEETT-HHHHHHHHH
T ss_pred EECCccceeeEee-eCCC-cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCC-cEEEEEECCCHHHHHHHHH
Confidence 4444444444444 3332 7775544 99999999988 7777665 5789999999999999964
No 132
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=94.66 E-value=0.44 Score=46.88 Aligned_cols=118 Identities=12% Similarity=0.079 Sum_probs=77.8
Q ss_pred cCcHHHHHHHHHHhcCC--CCCHHH---HH-HHHhcCCcEEEEEE-ECCeEEEEEEEEEecc-----------------c
Q psy3403 387 ELQMPDIIKLIQKDLSE--PYSIYT---YR-YFIHNWPKFCFLAM-DEQKCVGAIVCKLDIH-----------------R 442 (511)
Q Consensus 387 eeDle~L~eL~~~~f~~--~~see~---~e-~~le~~~~~~fVA~-ddGeLVG~a~l~~~~~-----------------~ 442 (511)
.++++++..+-.+.|.. .|.... .+ +.++.....++++. ++|++||.+.+..... .
T Consensus 15 ~~~l~~~~rLR~~VF~~elgW~~~~~~g~E~D~yD~~~~~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~ 94 (207)
T PRK13834 15 ASLLKQMHRLRARVFGGRLGWDVSITDGEERDQFDDLKPTYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLN 94 (207)
T ss_pred HHHHHHHHHHHHHHhccccCCCCCCCCCcCccCCCCCCCEEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcCCCCCC
Confidence 34566677776666652 332211 11 11122234555655 4689999998743211 0
Q ss_pred cccceEEEEEEEEccCccCC---c----HHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEe
Q psy3403 443 KVIRRGYIAMLAVDENYRKR---K----IGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRD 507 (511)
Q Consensus 443 ~~~~~a~I~~IaV~PeyRGQ---G----IGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~v 507 (511)
......++..++|++++++. + +...|+..+.+++..+|++.++..+. ....++++++||...
T Consensus 95 ~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~---~~~~r~l~r~G~~~~ 163 (207)
T PRK13834 95 AHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGYTEIVTATD---LRFERILARAGWPMQ 163 (207)
T ss_pred CCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCCCEEEEEEC---HHHHHHHHHcCCCeE
Confidence 13457899999999986322 2 66789999999999999999888776 467789999998754
No 133
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=93.63 E-value=0.21 Score=47.29 Aligned_cols=90 Identities=11% Similarity=0.004 Sum_probs=62.1
Q ss_pred CCCCChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeEEEE-eCCeEEEEEEee-cccCCccceEEecc--------Chhh
Q psy3403 11 KSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLM-DQLKTINIIEND-TATQSIRSALNNTT--------LVPS 80 (511)
Q Consensus 11 ~~e~dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~~~A-~~g~~vG~i~~~-~~~~~~rghiv~~a--------gig~ 80 (511)
....|++.|.+||+.---+---.--.|.-++.-.+=|.|+ .+|++||-.--. +.+.. -|-+-++| |+|.
T Consensus 6 A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~~i~dF~i~E~~g~viGC~aL~~~~~~~-~gE~~~laV~pd~r~~G~G~ 84 (153)
T COG1246 6 ARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTIIERDGKVIGCAALHPVLEED-LGELRSLAVHPDYRGSGRGE 84 (153)
T ss_pred ccccchHHHHHHHHHHhhccccchhhHHHHHHHHhhheeeeeCCcEEEEEeecccCccC-eeeEEEEEECHHhcCCCcHH
Confidence 4568999999999854221000011233455556668888 899999865443 21222 37777777 9999
Q ss_pred HHHHhhh-hccccCccEEEEEE
Q psy3403 81 NLNSESK-DVEDSNCNITVICH 101 (511)
Q Consensus 81 ~L~~~~~-~~~~~~~~ev~LEv 101 (511)
.|+.+++ .-|+.|.+++|+=+
T Consensus 85 ~Ll~~~~~~Ar~~gi~~lf~LT 106 (153)
T COG1246 85 RLLERLLADARELGIKELFVLT 106 (153)
T ss_pred HHHHHHHHHHHHcCCceeeeee
Confidence 9999999 99999999999655
No 134
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=93.47 E-value=0.21 Score=35.97 Aligned_cols=53 Identities=6% Similarity=0.060 Sum_probs=38.7
Q ss_pred EEE-eCCeEEEEEEeecccC-CccceEEecc--------ChhhHHHHhhh-hccccCccEEEEE
Q psy3403 48 FLM-DQLKTINIIENDTATQ-SIRSALNNTT--------LVPSNLNSESK-DVEDSNCNITVIC 100 (511)
Q Consensus 48 ~~A-~~g~~vG~i~~~~~~~-~~rghiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LE 100 (511)
|++ .++++||++....... ....+|..++ |+|++|+..++ .+++.|+..++|+
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~ 65 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRLE 65 (65)
T ss_pred EEEecCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEeC
Confidence 445 7899999999887321 1234443333 99999999999 7777899888874
No 135
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=93.28 E-value=1.1 Score=42.97 Aligned_cols=114 Identities=13% Similarity=0.148 Sum_probs=74.8
Q ss_pred eEEEEcCCcC-cHHHHHHHHHHhcCCCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEcc
Q psy3403 379 IKYVSYKSEL-QMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDE 457 (511)
Q Consensus 379 i~irr~ltee-Dle~L~eL~~~~f~~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~P 457 (511)
+....-.+.- |++.+.+++.+.|......+.+...++......|+ +|..-|.+++...........+++..++|.+
T Consensus 22 i~~~~s~~~~~d~~kL~~ll~~sf~~~~~v~~yl~~l~~~~~~iy~---d~~y~~~AIVt~e~~~~~~~v~yLdKFav~~ 98 (170)
T PF04768_consen 22 ILKHSSLSEFVDLDKLRALLERSFGGKLDVDHYLDRLNNRLFKIYV---DEDYEGAAIVTPEGPDSNGPVPYLDKFAVSK 98 (170)
T ss_dssp EEEESSCCCSS-HHHHHHHHHHHSTSSSBHTTHHHHHHTS-SEEEE---ETTSSEEEEEEEE-SCTCTSEEEEEEEEE-H
T ss_pred eEEecCccccCCHHHHHHHHHhcccccccHHHHHHHhhccceEEEE---eCCceEEEEEEecCCCCCCCCeEEEEEEecc
Confidence 3344444444 89999999999996666666666666654444444 3555566666553323345689999999999
Q ss_pred CccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHH
Q psy3403 458 NYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYE 500 (511)
Q Consensus 458 eyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYE 500 (511)
..||.|++..+..++.+.. .+++..+.+.|+.-.=+++
T Consensus 99 ~~~g~gv~D~vf~~i~~d~-----p~L~Wrsr~~n~~~~Wyf~ 136 (170)
T PF04768_consen 99 SAQGSGVADNVFNAIRKDF-----PKLFWRSREDNPNNKWYFE 136 (170)
T ss_dssp HHHHTTHHHHHHHHHHHH------SSEEEEEETT-TTHHHHHH
T ss_pred hhhhcCHHHHHHHHHHHhc-----cceEEEecCCCCcccEEEE
Confidence 9999999999999986655 3477778887754433343
No 136
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=93.20 E-value=0.36 Score=50.85 Aligned_cols=59 Identities=7% Similarity=-0.026 Sum_probs=46.1
Q ss_pred CeEEEE-eCCeEEEEEEeecccCCccceEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhh
Q psy3403 45 KFCFLM-DQLKTINIIENDTATQSIRSALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDIL 112 (511)
Q Consensus 45 ~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~ 112 (511)
+.++++ .+|++||+.... . ..|..+| |||++||.+.+ .+++.|+..++|++...| ++||
T Consensus 31 d~~vv~~~~~~lVg~g~l~--g----~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~---~~fy 99 (332)
T TIGR00124 31 EIFIAVYEDEEIIGCGGIA--G----NVIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEY---AALF 99 (332)
T ss_pred CEEEEEEECCEEEEEEEEe--c----CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchH---HHHH
Confidence 677888 799999985431 1 2344444 99999999999 999999999999998766 3565
No 137
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=92.94 E-value=0.84 Score=48.45 Aligned_cols=124 Identities=15% Similarity=0.146 Sum_probs=66.5
Q ss_pred eEEEEcCCcCcHHHHHHHHHHhcC----CCCCHHHHHHHH--------h-c-----CCcEEEEEEE--CCeEEEEEEEEE
Q psy3403 379 IKYVSYKSELQMPDIIKLIQKDLS----EPYSIYTYRYFI--------H-N-----WPKFCFLAMD--EQKCVGAIVCKL 438 (511)
Q Consensus 379 i~irr~lteeDle~L~eL~~~~f~----~~~see~~e~~l--------e-~-----~~~~~fVA~d--dGeLVG~a~l~~ 438 (511)
|.++|+.+.+|++++.+|....-. -|-..+.+...+ . . .....||.++ .|++||++.+..
T Consensus 1 M~viRp~~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I~a 80 (342)
T PF04958_consen 1 MLVIRPARPSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAIEA 80 (342)
T ss_dssp -EEEEE--GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETTT--EEEEEEEES
T ss_pred CeEEecCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecCCCcEEEEEeEEe
Confidence 345667899999999999876422 233333333222 1 1 1235667775 599999997732
Q ss_pred ecc--------------------------------ccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHH---CCCCE
Q psy3403 439 DIH--------------------------------RKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVA---DDADE 483 (511)
Q Consensus 439 ~~~--------------------------------~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are---~G~~r 483 (511)
... ....+..+|..++++|+||+-|.|+.|-+.-.-+... +=..+
T Consensus 81 ~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFiA~~~~rF~~~ 160 (342)
T PF04958_consen 81 AVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFIAQHRERFADR 160 (342)
T ss_dssp STTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHHHH-GGGS-SE
T ss_pred ccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHHHhChhhcchh
Confidence 110 0123347799999999999999999887765444432 22345
Q ss_pred EEEEEe---cCCHHHHHHHHHCC
Q psy3403 484 VVLETE---ITNRPALKLYENLG 503 (511)
Q Consensus 484 I~L~V~---~~N~~AikFYEKlG 503 (511)
+..+.. ..+ .--.||+.+|
T Consensus 161 viAElrG~~De~-G~SPFWdalG 182 (342)
T PF04958_consen 161 VIAELRGVSDED-GRSPFWDALG 182 (342)
T ss_dssp EEEE--B---TT----HHHHHTG
T ss_pred eeeeccCCcCCC-CCCchHHHhh
Confidence 665532 122 3356777766
No 138
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=92.92 E-value=0.13 Score=42.79 Aligned_cols=31 Identities=19% Similarity=0.198 Sum_probs=26.9
Q ss_pred eEEEEEEEEccCccCCcHHHHHHHHHHHHHH
Q psy3403 447 RGYIAMLAVDENYRKRKIGSNLVLKAIRAMV 477 (511)
Q Consensus 447 ~a~I~~IaV~PeyRGQGIGraLL~aLie~Ar 477 (511)
...|..|+|+|.+|++||+++||+.+.....
T Consensus 5 ~~GI~RIWV~~~~RR~GIAt~Lld~ar~~~i 35 (70)
T PF13880_consen 5 VCGISRIWVSPSHRRKGIATRLLDAARENFI 35 (70)
T ss_pred EEEeEEEEeChhhhhhhHHHHHHHHHHHhcc
Confidence 3458889999999999999999999887653
No 139
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=92.88 E-value=0.23 Score=47.90 Aligned_cols=88 Identities=10% Similarity=0.155 Sum_probs=66.0
Q ss_pred CCeEEEE--eCCeEEEEEEeecccCCc----cceE-Eecc------ChhhHHHHhhh-hccccCccEEEEEEeecChhhh
Q psy3403 44 PKFCFLM--DQLKTINIIENDTATQSI----RSAL-NNTT------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQ 109 (511)
Q Consensus 44 P~l~~~A--~~g~~vG~i~~~~~~~~~----rghi-v~~a------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~ 109 (511)
|-..|+| .+|++||.|-.|-.-..+ -||| -+|+ |.|++++..++ .-|+.|.+.|-+-.-..|.++-
T Consensus 67 ~~~~y~~v~~d~~ivG~i~lRh~Ln~~ll~~gGHIGY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASr 146 (174)
T COG3981 67 PASTYWAVDEDGQIVGFINLRHQLNDFLLEEGGHIGYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASR 146 (174)
T ss_pred eceeEEEEecCCcEEEEEEeeeecchHHHhcCCcccceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhh
Confidence 5567777 459999999999742221 5888 5555 99999999999 9999999999999999999987
Q ss_pred Hhhh--cccccCCCCCCCcccccccc
Q psy3403 110 DILY--NGVTNSNHNDLGSNKLSERY 133 (511)
Q Consensus 110 ~l~~--~~~~~~~~~~~~~~~~~~~~ 133 (511)
+.-+ +|+--+--.+- .+..+||
T Consensus 147 kvI~~NGGile~~~~~~--g~~~~RY 170 (174)
T COG3981 147 KVIEANGGILENEFFGE--GKEIRRY 170 (174)
T ss_pred HHHHhcCCEEeEEEccC--Cceeeee
Confidence 7543 34443333332 5666776
No 140
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=92.62 E-value=0.33 Score=46.66 Aligned_cols=102 Identities=11% Similarity=0.090 Sum_probs=70.5
Q ss_pred CCCChhHHHHHHhhhC--------CCCccHHHHH-HHHHhCCC--eEEEE--eCCeEEEEEEeec--ccCCccceE-Eec
Q psy3403 12 SELQMPDIIKLIQKDL--------SEPYSIYTYR-YFIHNWPK--FCFLM--DQLKTINIIENDT--ATQSIRSAL-NNT 75 (511)
Q Consensus 12 ~e~dl~~I~~l~~~~L--------sEpYsi~~yr-yfl~~wP~--l~~~A--~~g~~vG~i~~~~--~~~~~rghi-v~~ 75 (511)
..+|++.|++|-..-. -+|=+.-.+. .|...-+. -.+|| .+|+++||....- .+..+++-| .||
T Consensus 8 ~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~tve~Si 87 (169)
T COG1247 8 TAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFRERPAYRHTVELSI 87 (169)
T ss_pred hHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeEEEEEEeeeccCccccceEEEEEE
Confidence 3467888888765433 2455555443 23333343 23445 3599999988766 244556655 222
Q ss_pred --c------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh
Q psy3403 76 --T------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 76 --a------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
. |||++|+.++| ..+..|.-+.+=-|--+|.++++|--
T Consensus 88 Yv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~ 134 (169)
T COG1247 88 YLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIALHE 134 (169)
T ss_pred EECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHHHH
Confidence 2 99999999999 88889999999999999999999853
No 141
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=92.34 E-value=2.5 Score=38.90 Aligned_cols=93 Identities=17% Similarity=0.095 Sum_probs=61.8
Q ss_pred HHHHHHHHhc-CCcE-EEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEE
Q psy3403 407 IYTYRYFIHN-WPKF-CFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEV 484 (511)
Q Consensus 407 ee~~e~~le~-~~~~-~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI 484 (511)
.+.+..++.. +... .+-...+|++||.+++...... ..-|. .+-+|++..+.+|+-.+-..+++|++.|.+-+
T Consensus 25 ~~~y~~fl~~~~~~t~~~~~~~~~kLiav~v~D~l~~g----lSaVY-~fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~ 99 (128)
T PF04377_consen 25 QEQYRRFLCSSPLGTYHLEYRLDGKLIAVAVVDILPDG----LSAVY-TFYDPDYSKRSLGTYSILREIELARELGLPYY 99 (128)
T ss_pred HHHHHHHHhCCCCCCEEEEEEeCCeEEEEEEeecccch----hhhee-eeeCCCccccCcHHHHHHHHHHHHHHcCCCEE
Confidence 5566666643 2233 3334579999999988764432 22233 34489999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHHHHCCCEE
Q psy3403 485 VLETEITNRPALKLYENLGFVR 506 (511)
Q Consensus 485 ~L~V~~~N~~AikFYEKlGFe~ 506 (511)
.|.=-..+ ..+|-=|..|.+
T Consensus 100 YLGY~I~~--c~kM~YK~~f~P 119 (128)
T PF04377_consen 100 YLGYWIHG--CPKMNYKARFRP 119 (128)
T ss_pred eeCeEeCC--CCcccchhcCCc
Confidence 88733222 233444444444
No 142
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=92.26 E-value=3.2 Score=42.09 Aligned_cols=81 Identities=19% Similarity=0.096 Sum_probs=58.7
Q ss_pred CCCHHHHHHHHhcC-CcEEEE-EEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCC
Q psy3403 404 PYSIYTYRYFIHNW-PKFCFL-AMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDA 481 (511)
Q Consensus 404 ~~see~~e~~le~~-~~~~fV-A~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~ 481 (511)
+.+.+.+..++... ....++ ...+|++||.+++...... ..-|. .+-+|++-.+++|+.++-..+++|++.|.
T Consensus 127 ~~~~~~y~~Fl~~~~~~t~~~ey~~~g~LiaVav~D~l~d~----lSAVY-~FyDPd~~~~SLG~~~iL~qI~~ak~~gl 201 (240)
T PRK01305 127 PPSRDQYAQFLEDSWVNTRFIEFRGDGKLVAVAVTDVLDDG----LSAVY-TFYDPDEEHRSLGTFAILWQIELAKRLGL 201 (240)
T ss_pred CCCHHHHHHHHhcCCCCcEEEEEEeCCeEEEEEEEeccCCc----eeeEE-EeeCCCccccCCHHHHHHHHHHHHHHcCC
Confidence 34566777777533 233333 3468999999988765433 22233 45599999999999999999999999999
Q ss_pred CEEEEEEe
Q psy3403 482 DEVVLETE 489 (511)
Q Consensus 482 ~rI~L~V~ 489 (511)
.-++|.--
T Consensus 202 ~y~YLGY~ 209 (240)
T PRK01305 202 PYVYLGYW 209 (240)
T ss_pred CeEeeeEE
Confidence 99998743
No 143
>KOG2535|consensus
Probab=91.93 E-value=0.2 Score=53.12 Aligned_cols=49 Identities=16% Similarity=0.302 Sum_probs=40.8
Q ss_pred CccCCcHHHHHHHHHHHHHHH-CCCCEEEEEEecCCHHHHHHHHHCCCEEeeE
Q psy3403 458 NYRKRKIGSNLVLKAIRAMVA-DDADEVVLETEITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 458 eyRGQGIGraLL~aLie~Are-~G~~rI~L~V~~~N~~AikFYEKlGFe~vG~ 509 (511)
.||+||+|+.||+++.+.|++ +|-.+|.+..- ...+.+|+|+||+..|-
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISG---VGtR~YY~klGY~LdGP 547 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISG---VGTRNYYRKLGYELDGP 547 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEec---cchHHHHHhhCeeecCh
Confidence 599999999999999999987 67777665543 45688999999998763
No 144
>KOG2488|consensus
Probab=91.39 E-value=0.32 Score=47.66 Aligned_cols=101 Identities=8% Similarity=0.001 Sum_probs=63.2
Q ss_pred CChhHHHHHHhhhCCCCccHHH--HHHH-----HHhCCCeEEEE-eCC-eEEEEEEeecc-cCCc-cceE--Eecc----
Q psy3403 14 LQMPDIIKLIQKDLSEPYSIYT--YRYF-----IHNWPKFCFLM-DQL-KTINIIENDTA-TQSI-RSAL--NNTT---- 76 (511)
Q Consensus 14 ~dl~~I~~l~~~~LsEpYsi~~--yryf-----l~~wP~l~~~A-~~g-~~vG~i~~~~~-~~~~-rghi--v~~a---- 76 (511)
++|+-..+|+++.+--=|--.- |.-+ |..----+++| .++ +.|||+|=|.. +.|. -=++ |-+|
T Consensus 54 ~~ldw~f~L~k~nm~~~Y~qs~~Gw~~~~K~~El~~~~~~Yi~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR 133 (202)
T KOG2488|consen 54 EDLDWCFSLFKKNMGAMYRQSSWGWDDNSKAKELRNRKLRYICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYR 133 (202)
T ss_pred HHHHHHHHHHHhhhHHHhhhcccccCchhHHHHHhhccceEEEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhhh
Confidence 4566777787776421111111 1111 11212235667 444 78999999984 3321 0011 3344
Q ss_pred --ChhhHHHHhhhhccc-cCccEEEEEEeecChhhhHhhhc
Q psy3403 77 --LVPSNLNSESKDVED-SNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 77 --gig~~L~~~~~~~~~-~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
|||+.|+..+..|.. ..-..|.|=|=-.|++|++||-.
T Consensus 134 ~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~ 174 (202)
T KOG2488|consen 134 GKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYHR 174 (202)
T ss_pred ccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHHH
Confidence 999999999996666 66677999999999999999963
No 145
>PRK10456 arginine succinyltransferase; Provisional
Probab=91.28 E-value=1.6 Score=46.47 Aligned_cols=94 Identities=15% Similarity=0.152 Sum_probs=60.8
Q ss_pred EEEEcCCcCcHHHHHHHHHHhcC----CCCCHHHHHHHHh------------cCCcEEEEEEE--CCeEEEEEEEEEecc
Q psy3403 380 KYVSYKSELQMPDIIKLIQKDLS----EPYSIYTYRYFIH------------NWPKFCFLAMD--EQKCVGAIVCKLDIH 441 (511)
Q Consensus 380 ~irr~lteeDle~L~eL~~~~f~----~~~see~~e~~le------------~~~~~~fVA~d--dGeLVG~a~l~~~~~ 441 (511)
.++|+....|++++.+|....-. -|-.++.+...+. ......||.++ .|++||++.+.....
T Consensus 2 ~vvRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG 81 (344)
T PRK10456 2 MVIRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVG 81 (344)
T ss_pred eEEecCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCcEEEEEeEEeccc
Confidence 45667899999999999876432 2333444333221 22345667775 689999997632110
Q ss_pred --------------------------------ccccceEEEEEEEEccCccCCcHHHHHHHHHH
Q psy3403 442 --------------------------------RKVIRRGYIAMLAVDENYRKRKIGSNLVLKAI 473 (511)
Q Consensus 442 --------------------------------~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLi 473 (511)
....+..+|..++++|+||+-|.|+.|-+.-.
T Consensus 82 ~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~Rf 145 (344)
T PRK10456 82 LNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRF 145 (344)
T ss_pred CCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHHHH
Confidence 01223467889999999999999987766533
No 146
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=91.10 E-value=2.3 Score=38.82 Aligned_cols=50 Identities=14% Similarity=0.202 Sum_probs=35.6
Q ss_pred EEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHH
Q psy3403 449 YIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYEN 501 (511)
Q Consensus 449 ~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEK 501 (511)
-|.+++|++..|++|+|++|++.++..- ++.-..+.++-.......|.+|
T Consensus 48 cvLDFyVhes~QR~G~Gk~LF~~ML~~e---~~~p~~~a~DrPS~Kll~Fl~K 97 (120)
T PF05301_consen 48 CVLDFYVHESRQRRGYGKRLFDHMLQEE---NVSPHQLAIDRPSPKLLSFLKK 97 (120)
T ss_pred eeeeEEEEeceeccCchHHHHHHHHHHc---CCCcccceecCCcHHHHHHHHH
Confidence 4678999999999999999999887654 3333344455444455666655
No 147
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=90.95 E-value=7 Score=37.02 Aligned_cols=121 Identities=12% Similarity=0.113 Sum_probs=67.5
Q ss_pred EEEEcCCcCcHHHHHHHHHHhc----------C-------CCCCHHHHHHHHhcCCcEEEEEE-ECCeEEEEEEEEEecc
Q psy3403 380 KYVSYKSELQMPDIIKLIQKDL----------S-------EPYSIYTYRYFIHNWPKFCFLAM-DEQKCVGAIVCKLDIH 441 (511)
Q Consensus 380 ~irr~lteeDle~L~eL~~~~f----------~-------~~~see~~e~~le~~~~~~fVA~-ddGeLVG~a~l~~~~~ 441 (511)
.++. ..+.|++.+.++..... + -+.+...+.++.. .+..|+|. .+|++.||+..... |
T Consensus 2 ~yR~-f~e~D~~aL~ald~a~qr~~dP~fd~lperer~gr~~tSl~Alrfy~R--sgHSFvA~~e~~~~~GfvLAQaV-W 77 (161)
T PF09390_consen 2 RYRP-FTEPDFAALQALDLAAQRRTDPAFDGLPEREREGRLSTSLAALRFYER--SGHSFVAEDEGGELQGFVLAQAV-W 77 (161)
T ss_dssp EEE----GGGHHHHHHC--------------------STTS---HHHHHHHHC--CS--EEEE-ETTEEEEEEEEEEE-E
T ss_pred cccc-cCcccHHHHHHHhhhccccccccccccccccccccccCCHHHhhhhhc--cCCcEEEEccCCceeeeeehhHH-h
Confidence 4554 56778888887733221 1 1122333444433 47789999 78999999876432 2
Q ss_pred ccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEee
Q psy3403 442 RKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDK 508 (511)
Q Consensus 442 ~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG 508 (511)
....+...+..|.++|. +......-|+.++.+-|-+.|...+.+.+++ ....-.+..||...+
T Consensus 78 QGdrptVlV~ri~~~~~-~~~~~~~GLLrAvvKSAYDa~VYEv~l~l~p---~l~~A~~a~~~~~~~ 140 (161)
T PF09390_consen 78 QGDRPTVLVRRILLAPG-EPEEVYEGLLRAVVKSAYDAGVYEVHLHLDP---ELEAAARAEGFRLGG 140 (161)
T ss_dssp -SSSEEEEEEEE---EE-SSHHHHHHHHHHHHHHHHHTT-SEEEE---T---HHHHHHHHTT----S
T ss_pred cCCCceEEEEEeecCCC-CcHHHHHHHHHHHHHhhhccceEEEEeeCCH---HHHHHHhhcccccCC
Confidence 22335667776666553 4567888899999999999999999999986 455666777887655
No 148
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.39 E-value=3.1 Score=41.36 Aligned_cols=88 Identities=16% Similarity=0.111 Sum_probs=65.4
Q ss_pred CCcEEEEE-EECCeEEEEEEEEEecc----------------cc-ccceEEEEEEEEcc--CccCCc----HHHHHHHHH
Q psy3403 417 WPKFCFLA-MDEQKCVGAIVCKLDIH----------------RK-VIRRGYIAMLAVDE--NYRKRK----IGSNLVLKA 472 (511)
Q Consensus 417 ~~~~~fVA-~ddGeLVG~a~l~~~~~----------------~~-~~~~a~I~~IaV~P--eyRGQG----IGraLL~aL 472 (511)
....++++ ..+|+++|.+.+-.... .+ .....+...++|+. .-|++| ++..|+.-+
T Consensus 50 ~~t~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ 129 (209)
T COG3916 50 LDTVYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGM 129 (209)
T ss_pred CCceEEEEEcCCCcEEEEEEeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHH
Confidence 34556677 56899999998843211 11 22456778888886 433333 478999999
Q ss_pred HHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEe
Q psy3403 473 IRAMVADDADEVVLETEITNRPALKLYENLGFVRD 507 (511)
Q Consensus 473 ie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~v 507 (511)
++++...|+++|...++ ....+++++.||..+
T Consensus 130 ie~a~~~G~~~IvtVt~---~~meril~r~Gw~~~ 161 (209)
T COG3916 130 IEYALARGITGIVTVTD---TGMERILRRAGWPLT 161 (209)
T ss_pred HHHHHHcCCceEEEEEc---hHHHHHHHHcCCCeE
Confidence 99999999999998887 788999999999754
No 149
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=90.08 E-value=1.4 Score=38.75 Aligned_cols=66 Identities=12% Similarity=0.051 Sum_probs=49.4
Q ss_pred EEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCH
Q psy3403 421 CFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNR 493 (511)
Q Consensus 421 ~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~ 493 (511)
.+-++.++...|.+.+..... .....+++.++|.|..||+|+|..|+.++.+.. ..++-.+.+.|+
T Consensus 10 ~~~~y~~e~y~~~aIvt~~~~--~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~-----~~L~Wrsr~~n~ 75 (99)
T cd04264 10 LHAIYLSEGYNAAAIVTYEGV--NNGVPYLDKFAVSSSAQGEGTSDALWRRLRRDF-----PKLFWRSRKTNP 75 (99)
T ss_pred ceEEEEeCCceEEEEEeccCC--CCCceEEEEEEEchhhhhcChHHHHHHHHHhhC-----CceEEEeCCCCc
Confidence 344555677888888765331 135789999999999999999999999888763 456677777775
No 150
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=89.38 E-value=4.2 Score=35.24 Aligned_cols=96 Identities=8% Similarity=0.057 Sum_probs=64.4
Q ss_pred ceEEEeCCCCCChhHHHHHHhhh-------CCCCccHHHHHHHHHhC--CCe-EEE-E-eCCeEEEEEEeecccCCccce
Q psy3403 4 GIKYVSYKSELQMPDIIKLIQKD-------LSEPYSIYTYRYFIHNW--PKF-CFL-M-DQLKTINIIENDTATQSIRSA 71 (511)
Q Consensus 4 ~i~y~~~~~e~dl~~I~~l~~~~-------LsEpYsi~~yryfl~~w--P~l-~~~-A-~~g~~vG~i~~~~~~~~~rgh 71 (511)
.++++.-.+.+|++.++++..+. ++.|.+.-+|+-++... ++. -++ + .+|++||...+-.....+-.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~g~~va~~~~~~~~~~~~~~ 98 (142)
T PF13480_consen 19 GVRFEVATDPADLEAFYELYRESWARRHGGFAPPFSRDFFRDLLRSLAESGRLRLFVLYDGGEPVAFALGFRHGGTLYYW 98 (142)
T ss_pred CEEEEEeCCHHHHHHHHHHHHHHHhhhhCCCCCcchHHHHHHHHHhhccCCCEEEEEEEECCEEEEEEEEEEECCEEEEE
Confidence 35555545777888888887532 34567777888888876 333 222 3 899999999888843322222
Q ss_pred EEecc------ChhhHHHHhhh-hccccCccEEEE
Q psy3403 72 LNNTT------LVPSNLNSESK-DVEDSNCNITVI 99 (511)
Q Consensus 72 iv~~a------gig~~L~~~~~-~~~~~~~~ev~L 99 (511)
....- ++|..|+.++| ...+.|+..+=|
T Consensus 99 ~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~ 133 (142)
T PF13480_consen 99 YGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDF 133 (142)
T ss_pred EEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEE
Confidence 22222 89999999999 888888776544
No 151
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=88.21 E-value=2.9 Score=44.38 Aligned_cols=91 Identities=16% Similarity=0.129 Sum_probs=57.9
Q ss_pred EEcCCcCcHHHHHHHHHHhcC----CCCCHHHHHHHHh------------cCCcEEEEEEE--CCeEEEEEEEEEecc--
Q psy3403 382 VSYKSELQMPDIIKLIQKDLS----EPYSIYTYRYFIH------------NWPKFCFLAMD--EQKCVGAIVCKLDIH-- 441 (511)
Q Consensus 382 rr~lteeDle~L~eL~~~~f~----~~~see~~e~~le------------~~~~~~fVA~d--dGeLVG~a~l~~~~~-- 441 (511)
+|+....|++++.+|....-. -|-.++.+...+. ......||.++ .|++||++.+.....
T Consensus 2 vRPv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~~ 81 (336)
T TIGR03244 2 VRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTETGTVAGVSAIEAAVGLE 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 456788899999998776421 2333443333221 12345667775 699999997632110
Q ss_pred ------------------------------ccccceEEEEEEEEccCccCCcHHHHHHHHH
Q psy3403 442 ------------------------------RKVIRRGYIAMLAVDENYRKRKIGSNLVLKA 472 (511)
Q Consensus 442 ------------------------------~~~~~~a~I~~IaV~PeyRGQGIGraLL~aL 472 (511)
....+..+|..++++|+||+-|.|+.|-+.-
T Consensus 82 ~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~R 142 (336)
T TIGR03244 82 EPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSR 142 (336)
T ss_pred CCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHHH
Confidence 0122346789999999999999998776543
No 152
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=87.65 E-value=3.2 Score=44.06 Aligned_cols=92 Identities=16% Similarity=0.146 Sum_probs=57.7
Q ss_pred EEcCCcCcHHHHHHHHHHhcC----CCCCHHHHHHHH-------------hcCCcEEEEEEE--CCeEEEEEEEEEecc-
Q psy3403 382 VSYKSELQMPDIIKLIQKDLS----EPYSIYTYRYFI-------------HNWPKFCFLAMD--EQKCVGAIVCKLDIH- 441 (511)
Q Consensus 382 rr~lteeDle~L~eL~~~~f~----~~~see~~e~~l-------------e~~~~~~fVA~d--dGeLVG~a~l~~~~~- 441 (511)
+|+....|++++.+|....-. -|-.++.+...+ .......||.++ .|++||++.+.....
T Consensus 2 iRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~ 81 (336)
T TIGR03245 2 VRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAGY 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEecccC
Confidence 456788899999998776321 233333332221 112345667775 699999997632110
Q ss_pred -------------------------------ccccceEEEEEEEEccCccCCcHHHHHHHHHH
Q psy3403 442 -------------------------------RKVIRRGYIAMLAVDENYRKRKIGSNLVLKAI 473 (511)
Q Consensus 442 -------------------------------~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLi 473 (511)
....+..+|..++++|+||+-|.|+.|-+.-.
T Consensus 82 ~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~Rf 144 (336)
T TIGR03245 82 GEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARL 144 (336)
T ss_pred CCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHHHH
Confidence 01223467899999999999999997766533
No 153
>PHA01733 hypothetical protein
Probab=87.20 E-value=2 Score=40.78 Aligned_cols=89 Identities=17% Similarity=0.042 Sum_probs=56.7
Q ss_pred HhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHH-CCCCEEEEEEecCC
Q psy3403 414 IHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVA-DDADEVVLETEITN 492 (511)
Q Consensus 414 le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are-~G~~rI~L~V~~~N 492 (511)
+.......+.+..+|+++|.++...+. .++.+....+..+.=.| +-+..+++...+..+ ..+..++=.|+..|
T Consensus 42 ~~~s~~~v~~~~~nG~l~aI~Gv~~d~---~~~vG~pWlV~T~~v~k---~~~~f~re~r~~l~e~~~Yp~LwNyV~~~N 115 (153)
T PHA01733 42 LDVSENVVAFVAPDGSLAGVAGLVEDM---GNRVGEIWMVCTPAIEK---NPIALLRGAKWWLPKSRNYDLLWNIVDKRN 115 (153)
T ss_pred hhccccceEEEecCCcEEEEecccccc---cCCCCceeEEecHHhHh---CCHHHHHHHHHHHHHhccccHHHHhHhccc
Confidence 333344445666689999988876522 22344444444433233 224455555555543 46777777899999
Q ss_pred HHHHHHHHHCCCEEee
Q psy3403 493 RPALKLYENLGFVRDK 508 (511)
Q Consensus 493 ~~AikFYEKlGFe~vG 508 (511)
..+++|.+.+||+...
T Consensus 116 ~~hir~Lk~lGF~f~~ 131 (153)
T PHA01733 116 LVHRKLLRKLGFKGLR 131 (153)
T ss_pred HHHHHHHHHcCceeec
Confidence 9999999999999764
No 154
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=86.89 E-value=2.6 Score=37.17 Aligned_cols=64 Identities=14% Similarity=0.092 Sum_probs=45.4
Q ss_pred EEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCH
Q psy3403 422 FLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNR 493 (511)
Q Consensus 422 fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~ 493 (511)
+-++.++..=|.+.+..... ....+++.++|.+..||+|+|..|+.++.+.. .+++-.+.++|+
T Consensus 12 ~~~y~~e~y~~~aivt~~~~---~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~-----~~L~Wrsr~~n~ 75 (99)
T cd04265 12 HTIYLSEGYNAAAIVTNEEV---DGVPYLDKFAVSSSAQGEGTGEALWRRLRRDF-----PKLFWRSRSTNP 75 (99)
T ss_pred eEEEEeCCCcEEEEEeccCC---CCceEEEEEEEchhhhhcChHHHHHHHHHhhC-----CceEEEeCCCCc
Confidence 33444455555555554321 25789999999999999999999999888764 346667777774
No 155
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=86.80 E-value=3.9 Score=43.38 Aligned_cols=92 Identities=15% Similarity=0.157 Sum_probs=57.3
Q ss_pred EEcCCcCcHHHHHHHHHHhcC----CCCCHHHHHHHH------------hcCCcEEEEEEE--CCeEEEEEEEEEecc--
Q psy3403 382 VSYKSELQMPDIIKLIQKDLS----EPYSIYTYRYFI------------HNWPKFCFLAMD--EQKCVGAIVCKLDIH-- 441 (511)
Q Consensus 382 rr~lteeDle~L~eL~~~~f~----~~~see~~e~~l------------e~~~~~~fVA~d--dGeLVG~a~l~~~~~-- 441 (511)
+|+....|++++.+|....-. -|-.++.+...+ .......||.++ .|++||++.+.....
T Consensus 2 vRpv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~~ 81 (335)
T TIGR03243 2 VRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAVGLD 81 (335)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 455778899999998776321 223333322221 112345567775 699999997632110
Q ss_pred ------------------------------ccccceEEEEEEEEccCccCCcHHHHHHHHHH
Q psy3403 442 ------------------------------RKVIRRGYIAMLAVDENYRKRKIGSNLVLKAI 473 (511)
Q Consensus 442 ------------------------------~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLi 473 (511)
....+..+|..++++|+||+-|.|+.|-+.-.
T Consensus 82 ~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~Rf 143 (335)
T TIGR03243 82 EPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRF 143 (335)
T ss_pred CCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHHHH
Confidence 01233467899999999999999998766543
No 156
>PRK14852 hypothetical protein; Provisional
Probab=86.37 E-value=3.9 Score=48.93 Aligned_cols=131 Identities=10% Similarity=0.063 Sum_probs=90.1
Q ss_pred cceEEEEcCCcCcHHHHHHHHHHhcC-CCCC----HHHHHHHHhcC-CcEEEEEEECCeEEEEEEEEEeccc--------
Q psy3403 377 GGIKYVSYKSELQMPDIIKLIQKDLS-EPYS----IYTYRYFIHNW-PKFCFLAMDEQKCVGAIVCKLDIHR-------- 442 (511)
Q Consensus 377 ~~i~irr~lteeDle~L~eL~~~~f~-~~~s----ee~~e~~le~~-~~~~fVA~ddGeLVG~a~l~~~~~~-------- 442 (511)
+...++...+.+++..+..|..+.|- ..|. ....-..+... ....|++...+++||...+..+.+.
T Consensus 27 dr~~~r~Aet~~e~~~~~~L~~~~Y~~~Gy~~~~ps~~~~~~~~~lp~t~~~i~k~~~~~l~T~t~~~ds~~~Gl~~D~l 106 (989)
T PRK14852 27 DRPAIKIAETPDEYTRAFRLVYEEYIRSGYLKPHPSRMYYNVWSILPATSVFIFKSYHDVLCTLTHIPDSGLFGLPMDTL 106 (989)
T ss_pred cCcceeecCCHHHHHHHHHHHHHHHHHcCCCCcCcccccCCccccCCcceEEEeccCCcEEEEEEEecCCcccCcCHHHH
Confidence 45567777788888888888776553 2221 11111111111 2334777666778888877665431
Q ss_pred ----------cccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHH-CCCEEeeEe
Q psy3403 443 ----------KVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYEN-LGFVRDKRL 510 (511)
Q Consensus 443 ----------~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEK-lGFe~vG~L 510 (511)
.....+++..++++++.|..-+--.+++.+..++...++..+.+.|.|.+ ..||++ +||+..+..
T Consensus 107 f~~eLd~lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPkH---~~FY~r~l~f~~ig~~ 182 (989)
T PRK14852 107 YKPEVDALRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPKH---VKFYTDIFLFKPFGEV 182 (989)
T ss_pred HHHHHHHHHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcch---HHHHHHHhCCcccccc
Confidence 12356889999999988887777788888888887789999999998777 789995 899987753
No 157
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=84.89 E-value=3.8 Score=44.15 Aligned_cols=85 Identities=14% Similarity=0.128 Sum_probs=66.2
Q ss_pred cHHHHHHHHHHhcCCCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccC-CcHHHH
Q psy3403 389 QMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRK-RKIGSN 467 (511)
Q Consensus 389 Dle~L~eL~~~~f~~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRG-QGIGra 467 (511)
|++.+..+..+.|........+...+...-...+|+ |.--|.+.+...... .....|++.++|.++.|| .|||..
T Consensus 346 dl~r~q~LI~~SFkRTLd~h~y~~r~~~~La~~iVs---gdY~g~aIlTyegs~-~~~vpYLDKfAVl~~aQGs~gisd~ 421 (495)
T COG5630 346 DLPRLQHLIQSSFKRTLDPHYYETRINTPLARAIVS---GDYRGAAILTYEGSG-ENNVPYLDKFAVLDDAQGSEGISDA 421 (495)
T ss_pred CcHHHHHHHHHHHhhccCHHHHHHhccCcceeEEee---ccceeeEEEEeeccC-CCCCcceeeeeccccccccchHHHH
Confidence 788899999999998888888888776544444554 566778877765322 346789999999999999 999999
Q ss_pred HHHHHHHHHH
Q psy3403 468 LVLKAIRAMV 477 (511)
Q Consensus 468 LL~aLie~Ar 477 (511)
+..-+.+...
T Consensus 422 vfniM~e~fP 431 (495)
T COG5630 422 VFNIMREEFP 431 (495)
T ss_pred HHHHHHHhCc
Confidence 9887777664
No 158
>KOG2779|consensus
Probab=84.75 E-value=13 Score=40.01 Aligned_cols=63 Identities=17% Similarity=0.232 Sum_probs=46.1
Q ss_pred cEEEEEE--ECCeEEEEEEEEEec---cccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCC
Q psy3403 419 KFCFLAM--DEQKCVGAIVCKLDI---HRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDA 481 (511)
Q Consensus 419 ~~~fVA~--ddGeLVG~a~l~~~~---~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~ 481 (511)
++.++.. ..+++|||+...+.. .+.....++|-.++|+.+.|+++++-.|++++.+.+.-.|+
T Consensus 134 ~WHiGVRv~~s~kLVaFIsaiP~~irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gI 201 (421)
T KOG2779|consen 134 EWHIGVRVKSSKKLVAFISAIPATIRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGI 201 (421)
T ss_pred ceEEEEEEecCCceEEEEeccccEEEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhhh
Confidence 3444443 356999999764321 22234568899999999999999999999999998865443
No 159
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=82.79 E-value=2.2 Score=37.74 Aligned_cols=52 Identities=13% Similarity=0.195 Sum_probs=39.9
Q ss_pred CeEEEE-eCCeEEEEEEeecccCCccc-eEEecc-----------ChhhHHHHhhh-hccccCccEEEEEE
Q psy3403 45 KFCFLM-DQLKTINIIENDTATQSIRS-ALNNTT-----------LVPSNLNSESK-DVEDSNCNITVICH 101 (511)
Q Consensus 45 ~l~~~A-~~g~~vG~i~~~~~~~~~rg-hiv~~a-----------gig~~L~~~~~-~~~~~~~~ev~LEv 101 (511)
+.+|+. .+|+++|.+.-.- +| .+..|- |||++||..++ ..|+.|-+.+=+|.
T Consensus 15 ~~~y~~~~~G~~~~e~~y~~-----~~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kiiP~Cs 80 (99)
T COG2388 15 NGRYVLTDEGEVIGEATYYD-----RGENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKIIPLCS 80 (99)
T ss_pred ceEEEEecCCcEEEEEEEec-----CCCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeEcccch
Confidence 567777 8999999876544 34 333333 99999999999 99999988877775
No 160
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=82.71 E-value=2.4 Score=47.43 Aligned_cols=34 Identities=6% Similarity=0.024 Sum_probs=31.0
Q ss_pred ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh
Q psy3403 77 LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 77 gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
|||++||.+++ ..++.|+..+.| .+|..|+++|-
T Consensus 473 GiG~~Ll~~ae~~Ar~~G~~~i~v---~s~~~A~~FY~ 507 (522)
T TIGR01211 473 GYGRRLLEEAERIAAEEGSEKILV---ISGIGVREYYR 507 (522)
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEE---eeCchHHHHHH
Confidence 99999999999 888899999987 46999999995
No 161
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=82.33 E-value=9.2 Score=34.26 Aligned_cols=62 Identities=8% Similarity=-0.084 Sum_probs=47.3
Q ss_pred CeEEEEEEeeccc----C--CccceEEecc----ChhhHHHHhhh--hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 53 LKTINIIENDTAT----Q--SIRSALNNTT----LVPSNLNSESK--DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 53 g~~vG~i~~~~~~----~--~~rghiv~~a----gig~~L~~~~~--~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
+++||.|--.-.. . ..-|+....+ |+|+..+.+.+ ...+.++..|.+.|-..|+++++++..
T Consensus 77 ~~~iG~~~~~~~~~~~~~~~~~ig~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek 150 (187)
T COG1670 77 GELIGVIGLSDIDRAANGDLAEIGYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEK 150 (187)
T ss_pred CeEEEEEEEEEeccccccceEEEEEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHH
Confidence 4889887654212 1 1135555555 99999999999 667799999999999999999999963
No 162
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=82.16 E-value=1.9 Score=41.91 Aligned_cols=115 Identities=7% Similarity=0.029 Sum_probs=72.6
Q ss_pred CCcCcHHHHHHHHHHhcCCC--CCHHH---HHHHHhcCCcEEEEEEECCeEEEEEEE---EEeccccccceEEEEEEEEc
Q psy3403 385 KSELQMPDIIKLIQKDLSEP--YSIYT---YRYFIHNWPKFCFLAMDEQKCVGAIVC---KLDIHRKVIRRGYIAMLAVD 456 (511)
Q Consensus 385 lteeDle~L~eL~~~~f~~~--~see~---~e~~le~~~~~~fVA~ddGeLVG~a~l---~~~~~~~~~~~a~I~~IaV~ 456 (511)
+..+|-.++.++++..|... +..+- -+.|.-..++.-.++++...+++-+.+ ++.......-.++++.++|.
T Consensus 15 L~l~dH~eLa~ffrktYgptg~fnakpFeg~RSWAGARPElRaIgyD~~GvaAH~G~LRRFIkVG~vDlLVaElGLygVR 94 (196)
T PF02474_consen 15 LQLADHVELAEFFRKTYGPTGAFNAKPFEGGRSWAGARPELRAIGYDSRGVAAHMGLLRRFIKVGEVDLLVAELGLYGVR 94 (196)
T ss_pred cchhhhHHHHHHHHHhcCCCCcccCccCCcccccccCCceeEEEeecCchHHHHHHHHHHHhccCCcceeEEEEEEEEee
Confidence 34556777888888877631 21111 122333445566677765544332221 11111111235889999999
Q ss_pred cCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCC
Q psy3403 457 ENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLG 503 (511)
Q Consensus 457 PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlG 503 (511)
|+.+|.||+..| ..+.-.++++|..-.+..|. .+.++.+++++
T Consensus 95 pDLEGlGi~hs~-r~m~PvLq~LgVPF~FGtVR---~al~~Hv~R~~ 137 (196)
T PF02474_consen 95 PDLEGLGISHSM-RVMYPVLQELGVPFGFGTVR---HALRNHVERLC 137 (196)
T ss_pred ccccccccchhh-hhhhhHHHhcCCCeecccch---HHHHHHHHHHh
Confidence 999999999976 67777788899998888887 56677777765
No 163
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=82.14 E-value=0.67 Score=50.69 Aligned_cols=61 Identities=21% Similarity=0.258 Sum_probs=44.8
Q ss_pred eEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEE-----EecCCHHHHHHHHHCCCEEe
Q psy3403 447 RGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLE-----TEITNRPALKLYENLGFVRD 507 (511)
Q Consensus 447 ~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~-----V~~~N~~AikFYEKlGFe~v 507 (511)
.+.|..+.|+|+||+-|+|..-+..+++|..++-+....-. +...-..=-.|+++.||...
T Consensus 241 aariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfkyl 306 (593)
T COG2401 241 AARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKYL 306 (593)
T ss_pred hhheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceeee
Confidence 36788999999999999999999999999998765544322 11111111269999999864
No 164
>PHA00432 internal virion protein A
Probab=81.89 E-value=12 Score=35.02 Aligned_cols=84 Identities=8% Similarity=-0.036 Sum_probs=48.9
Q ss_pred CcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHH--CCCCEEEEEEecCCHHH
Q psy3403 418 PKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVA--DDADEVVLETEITNRPA 495 (511)
Q Consensus 418 ~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are--~G~~rI~L~V~~~N~~A 495 (511)
...++.+..+|.+++.++-. ..+...+..-+|..- -++.-+...+.+..+... ..+..++=.|...|..+
T Consensus 36 s~~~~~~~~~G~~~aI~Gn~------G~~vW~v~T~~v~~~--~~~~~reF~k~~~~~ld~ml~~yp~LwNyV~~~N~~h 107 (137)
T PHA00432 36 DSECVTLSLDGFVLAIGGNQ------GDQVWFVTSDQVWRL--TKKEKREFRKLIMEYRDMMLDQYPSLWNYVWVGNKSH 107 (137)
T ss_pred CceEEEEecCCeEEEEecCC------CCceEEEecHHhhhC--ChhhhHHHHHHHHHHHHHHHHhhhhhheeeecCCHHH
Confidence 34577777899998877311 112122222222210 012223333333333322 23777888899999999
Q ss_pred HHHHHHCCCEEeeE
Q psy3403 496 LKLYENLGFVRDKR 509 (511)
Q Consensus 496 ikFYEKlGFe~vG~ 509 (511)
++|.+.+||+....
T Consensus 108 ir~Lk~lGf~f~~e 121 (137)
T PHA00432 108 IRFLKSIGAVFHNE 121 (137)
T ss_pred HHHHHHcCeeeecc
Confidence 99999999997653
No 165
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=81.28 E-value=13 Score=37.86 Aligned_cols=100 Identities=13% Similarity=0.018 Sum_probs=55.4
Q ss_pred CcCcHHHHHHHHHHhcCCC-CCH-HHHHHHH---hcCCcEEEEEEE-CCeEEEEEEEEEeccccccceEEEEEEE-EccC
Q psy3403 386 SELQMPDIIKLIQKDLSEP-YSI-YTYRYFI---HNWPKFCFLAMD-EQKCVGAIVCKLDIHRKVIRRGYIAMLA-VDEN 458 (511)
Q Consensus 386 teeDle~L~eL~~~~f~~~-~se-e~~e~~l---e~~~~~~fVA~d-dGeLVG~a~l~~~~~~~~~~~a~I~~Ia-V~Pe 458 (511)
++++.+++.++........ ..+ ..+...+ ...+...+++.. +|+++|++.+..... ..+++.++. -+++
T Consensus 142 ~~~~~~el~~i~~~W~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~dgki~af~~~~~~~~----~~~~~~~~~k~~~~ 217 (299)
T PF09924_consen 142 DPELRDELLEISDEWLKEKERPERGFIMGALEHFDELGLRGFVARVADGKIVAFAIGSPLGG----RDGWSIDFEKADPD 217 (299)
T ss_dssp -GGGHHHHHHHHHHHHHHCTHHHHHHHHHHHHTHHHHT-EEEEEEE-TTEEEEEEEEEEEE-----TTEEEEEEEEE-TT
T ss_pred CHHHHHHHHHHHHHHHhcCchhHHHHHhccccchhhcCceEEEEEECCCcEEEEEEEEEccC----CccEEEEEEecCCC
Confidence 5667777777765433322 011 1111111 122567788888 999999999987541 223333333 3444
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEEec
Q psy3403 459 YRKRKIGSNLVLKAIRAMVADDADEVVLETEI 490 (511)
Q Consensus 459 yRGQGIGraLL~aLie~Are~G~~rI~L~V~~ 490 (511)
--+|+-..|+..+++.+++.|+..+.|...|
T Consensus 218 -a~~G~~e~l~~~~~~~~~~~g~~~lnLg~ap 248 (299)
T PF09924_consen 218 -APKGIYEFLNVEFAEHLKAEGVEYLNLGFAP 248 (299)
T ss_dssp --STTHHHHHHHHHHHHS--TT--EEE-----
T ss_pred -CCCcHHHHHHHHHHHhhhhCCceEEEccccc
Confidence 4589999999999999998999998866543
No 166
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=80.97 E-value=22 Score=35.04 Aligned_cols=117 Identities=17% Similarity=0.154 Sum_probs=77.0
Q ss_pred EcCCcCcHHHHHHHHHHhcC-----CCCCHHHHHHHHhcCC--cEEEEEEEC-CeEEEEEEEEEeccc-------cccce
Q psy3403 383 SYKSELQMPDIIKLIQKDLS-----EPYSIYTYRYFIHNWP--KFCFLAMDE-QKCVGAIVCKLDIHR-------KVIRR 447 (511)
Q Consensus 383 r~lteeDle~L~eL~~~~f~-----~~~see~~e~~le~~~--~~~fVA~dd-GeLVG~a~l~~~~~~-------~~~~~ 447 (511)
|+++++|++++.+++..... ..++++++..|+.... -..||.+++ |++-.++.+...+.. .....
T Consensus 32 R~m~~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp~~~Vv~syVve~~~~~ITDf~SFY~Lpstvi~~~k~~~l~a 111 (190)
T PF02799_consen 32 RPMEEKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLPRKNVVYSYVVEDPDGKITDFFSFYSLPSTVIGNPKHKTLKA 111 (190)
T ss_dssp EE--GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS-BTTTEEEEEEEETTSEEEEEEEEEEEEEEESSSSSSSEEEE
T ss_pred ccCchhhHHHHHHHHHHHHHhcccccccCHHHHHhhcccCCCeEEEEEEecCCCceeeEEEEeecceeecCCCCccceee
Confidence 35889999999999988654 5678899999885433 345677765 488888876543321 12234
Q ss_pred EEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEe
Q psy3403 448 GYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRD 507 (511)
Q Consensus 448 a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~v 507 (511)
|+.. ..+...-| -..||..++-.|+..|+........-+|. .|.+.+.|..-
T Consensus 112 AY~f-Y~~~~~~~----l~~Lm~DaLi~Ak~~gfDVFNaLd~mdN~---~fL~~lKFg~G 163 (190)
T PF02799_consen 112 AYSF-YYVATSTR----LKELMNDALILAKNEGFDVFNALDLMDNS---SFLEDLKFGPG 163 (190)
T ss_dssp EEEE-EEEESSSH----HHHHHHHHHHHHHHTTESEEEEESTTTGG---GTTTTTT-EEE
T ss_pred eeee-eeeecCCC----HHHHHHHHHHHHHHcCCCEEehhhhccch---hhHhhCCccCC
Confidence 5554 45544433 46799999999999999977766666673 68889999863
No 167
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=80.35 E-value=5.9 Score=40.33 Aligned_cols=94 Identities=9% Similarity=-0.047 Sum_probs=59.5
Q ss_pred eEEEeCC--CCCChhHHHHHHhhhCCCC--ccHHHHHHHHHhC---CCeEEEE-e-CCeEEEEEEeecccCCccceEEec
Q psy3403 5 IKYVSYK--SELQMPDIIKLIQKDLSEP--YSIYTYRYFIHNW---PKFCFLM-D-QLKTINIIENDTATQSIRSALNNT 75 (511)
Q Consensus 5 i~y~~~~--~e~dl~~I~~l~~~~LsEp--Ysi~~yryfl~~w---P~l~~~A-~-~g~~vG~i~~~~~~~~~rghiv~~ 75 (511)
++++++. +++++++|+++.++=+.+- --+-+.+..+..| .--+++| . +|++||+++.--.. +-.|.++.+
T Consensus 133 ~~~~~~~~~~~~~~~el~~i~~~W~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~dgki~af~~~~~~~-~~~~~~~~~ 211 (299)
T PF09924_consen 133 FEVVPIPELDPELRDELLEISDEWLKEKERPERGFIMGALEHFDELGLRGFVARVADGKIVAFAIGSPLG-GRDGWSIDF 211 (299)
T ss_dssp -EEEE-----GGGHHHHHHHHHHHHHHCTHHHHHHHHHHHHTHHHHT-EEEEEEE-TTEEEEEEEEEEEE--TTEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHhcCchhHHHHHhccccchhhcCceEEEEEECCCcEEEEEEEEEcc-CCccEEEEE
Confidence 5667773 5778899999988776553 2233334444333 4556777 7 99999999988623 225666554
Q ss_pred c--------ChhhHHHHhhh-hccccCccEEEE
Q psy3403 76 T--------LVPSNLNSESK-DVEDSNCNITVI 99 (511)
Q Consensus 76 a--------gig~~L~~~~~-~~~~~~~~ev~L 99 (511)
. |+-..|+.+++ .+++.|++.+=|
T Consensus 212 ~k~~~~a~~G~~e~l~~~~~~~~~~~g~~~lnL 244 (299)
T PF09924_consen 212 EKADPDAPKGIYEFLNVEFAEHLKAEGVEYLNL 244 (299)
T ss_dssp EEE-TT-STTHHHHHHHHHHHHS--TT--EEE-
T ss_pred EecCCCCCCcHHHHHHHHHHHhhhhCCceEEEc
Confidence 4 99999999999 999889888764
No 168
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=79.69 E-value=5.2 Score=39.24 Aligned_cols=59 Identities=10% Similarity=0.188 Sum_probs=38.2
Q ss_pred CcEEEEEEE--CC--eEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCC
Q psy3403 418 PKFCFLAMD--EQ--KCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADD 480 (511)
Q Consensus 418 ~~~~fVA~d--dG--eLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G 480 (511)
+..++|... ++ .+||+..=... ....--+.-|.|.|.||++|+|+.|++..-..++..|
T Consensus 51 ~F~FYVl~e~d~~g~h~vGyFSKEk~----s~~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~ 113 (188)
T PF01853_consen 51 PFLFYVLTEKDDDGFHIVGYFSKEKE----SWDNNNLSCILTLPPYQRKGYGRFLIDFSYELSRREG 113 (188)
T ss_dssp TEEEEEEEEEETTEEEEEEEEEEESS-----TT-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEEEecCccceeEEEEEEEec----ccCCeeEeehhhcchhhhcchhhhhhhhHHHHhhccC
Confidence 344555543 32 36776543211 1123456778999999999999999999999988765
No 169
>KOG3698|consensus
Probab=75.22 E-value=17 Score=41.38 Aligned_cols=55 Identities=13% Similarity=0.172 Sum_probs=47.9
Q ss_pred EEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEee
Q psy3403 454 AVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDK 508 (511)
Q Consensus 454 aV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG 508 (511)
++..+.---|+.++||.-++..++..|..-.++.|..++..-++||.++||...+
T Consensus 823 ~~~~~a~D~~~~k~m~~vll~tL~aNGsrGaf~~V~~dD~~~~~fys~lG~~d~~ 877 (891)
T KOG3698|consen 823 YFGMDASDAHPMKKMIQVLLVTLAANGSRGAFLTVAIDDIERQKFYSELGLTDLG 877 (891)
T ss_pred ccccccccchHHHHHHHHHHHHHHhcCCcceeEEechhHHHHHHHHHHhchHHHh
Confidence 4445555789999999999999999999999999999999999999999997543
No 170
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=74.47 E-value=8.1 Score=35.79 Aligned_cols=44 Identities=14% Similarity=0.046 Sum_probs=34.7
Q ss_pred CCeEEEE-eCCeEEEEEEeecccCCccceEEecc--------ChhhHHHHhhh-hc
Q psy3403 44 PKFCFLM-DQLKTINIIENDTATQSIRSALNNTT--------LVPSNLNSESK-DV 89 (511)
Q Consensus 44 P~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a--------gig~~L~~~~~-~~ 89 (511)
....|.| ++++++|.|-..+... .|.+-.+. |||+.|+.++. .+
T Consensus 37 ~~~l~aArFNdRlLgAv~v~~~~~--~~~L~~l~VRevTRrRGVG~yLlee~~rq~ 90 (128)
T PF12568_consen 37 GHRLFAARFNDRLLGAVKVTISGQ--QAELSDLCVREVTRRRGVGLYLLEEVLRQL 90 (128)
T ss_dssp SEEEEEEEETTEEEEEEEEEEETT--EEEEEEEEE-TT-SSSSHHHHHHHHHHHHS
T ss_pred CCeEEEEEechheeeeEEEEEcCc--ceEEeeEEEeeccccccHHHHHHHHHHHHC
Confidence 4667888 9999999999888433 46665544 99999999999 55
No 171
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=72.66 E-value=59 Score=33.42 Aligned_cols=82 Identities=17% Similarity=0.104 Sum_probs=56.8
Q ss_pred CCCCHHHHHHHHhcC-CcEEEEE-E------ECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHH
Q psy3403 403 EPYSIYTYRYFIHNW-PKFCFLA-M------DEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIR 474 (511)
Q Consensus 403 ~~~see~~e~~le~~-~~~~fVA-~------ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie 474 (511)
.+.+..++..++... ....++- . ..|++|+.++.....+. ...+. .+-+|++..+.+|+.++-.-|.
T Consensus 127 ~~~s~~~f~~f~~d~~~~~~~~e~r~~~~~~~~G~LvAVavtDvL~dG----lSsVY-~FydPd~s~~SLGt~~iL~~I~ 201 (253)
T COG2935 127 SDMSFKDFAAFLEDTHVNTQLIEYRRRKPGKGEGKLVAVAVTDVLPDG----LSSVY-TFYDPDMSKRSLGTLSILDQIA 201 (253)
T ss_pred CCccHHHHHHHHhccccceeeEEEEecCCCCCCCcEEEEEeeecccCc----ceeEE-EEeCCChhhhcchHHHHHHHHH
Confidence 344555666655432 2222332 2 27999999988765443 22233 3459999999999999999999
Q ss_pred HHHHCCCCEEEEEEe
Q psy3403 475 AMVADDADEVVLETE 489 (511)
Q Consensus 475 ~Are~G~~rI~L~V~ 489 (511)
+|++.|...++|.=-
T Consensus 202 ~aq~~~l~yvYLGYw 216 (253)
T COG2935 202 IAQRLGLPYVYLGYW 216 (253)
T ss_pred HHHHhCCCeEEEEEE
Confidence 999999999999743
No 172
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=71.60 E-value=7.6 Score=32.32 Aligned_cols=46 Identities=9% Similarity=0.035 Sum_probs=31.7
Q ss_pred EEEEeCCeEEEEEEeecccCCccceEEe-------cc----ChhhHHHHhhh-hccccCccEE
Q psy3403 47 CFLMDQLKTINIIENDTATQSIRSALNN-------TT----LVPSNLNSESK-DVEDSNCNIT 97 (511)
Q Consensus 47 ~~~A~~g~~vG~i~~~~~~~~~rghiv~-------~a----gig~~L~~~~~-~~~~~~~~ev 97 (511)
|.+..+|+.+|+|-=+. .|.++. .+ |||+.||.+++ ..++.|-.-+
T Consensus 2 F~~~~~g~~~a~l~Y~~-----~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~kv~ 59 (78)
T PF14542_consen 2 FELKDDGEEIAELTYRE-----DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLKVV 59 (78)
T ss_dssp EEEESSTTEEEEEEEEE-----SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-EEE
T ss_pred EEEEECCEEEEEEEEEe-----CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCEEE
Confidence 44556788999887766 333333 23 99999999999 7777775543
No 173
>KOG4601|consensus
Probab=71.59 E-value=23 Score=36.02 Aligned_cols=52 Identities=13% Similarity=0.084 Sum_probs=35.1
Q ss_pred eEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHH
Q psy3403 447 RGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYEN 501 (511)
Q Consensus 447 ~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEK 501 (511)
.--|.+++|++.-|++|.|..|++.+++.= +..--.+.++--....++|.+|
T Consensus 108 ~lcILDFyVheS~QR~G~G~~lfdyMl~kE---~vephQ~a~DrPS~kLl~Fm~k 159 (264)
T KOG4601|consen 108 ALCILDFYVHESEQRSGNGFKLFDYMLKKE---NVEPHQCAFDRPSAKLLQFMEK 159 (264)
T ss_pred CceEEEEEeehhhhhcCchHHHHHHHHHhc---CCCchheeccChHHHHHHHHHH
Confidence 345888999999999999999999887643 3333334444333345566554
No 174
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=70.80 E-value=59 Score=30.62 Aligned_cols=86 Identities=9% Similarity=-0.012 Sum_probs=59.2
Q ss_pred CcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHH-CCCCEEEEEEecCCHHHH
Q psy3403 418 PKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVA-DDADEVVLETEITNRPAL 496 (511)
Q Consensus 418 ~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are-~G~~rI~L~V~~~N~~Ai 496 (511)
+..++.++..+.++|+..+..... ...+.+ -.-+|++|| ++...-...-+|+.+ .-...+...+...-.-.+
T Consensus 37 ~~~Y~gVyeg~~l~Gi~~v~~i~~----~~vecH-a~y~P~fRG--~a~~~~~~F~kwlL~Ns~f~~vit~vp~kt~~Gr 109 (151)
T PF11039_consen 37 DQLYLGVYEGGQLGGIVYVEEIQP----SVVECH-AMYDPGFRG--YALEIGRLFCKWLLENSPFQNVITFVPDKTRYGR 109 (151)
T ss_pred ccEEEEEEeceEEEEEEEEEEEee----eeEEEE-eeeccccch--hHHHHHHHHHHHHhcCCceeEEEEecccccccch
Confidence 455667777888888887754322 234444 344899999 899999999999987 445555555544445566
Q ss_pred HHHHHCCCEEeeEe
Q psy3403 497 KLYENLGFVRDKRL 510 (511)
Q Consensus 497 kFYEKlGFe~vG~L 510 (511)
-+.+-+|.+++|.+
T Consensus 110 vic~llg~~RVG~i 123 (151)
T PF11039_consen 110 VICRLLGARRVGHI 123 (151)
T ss_pred hHhhhhCCceeeeH
Confidence 67777888888764
No 175
>KOG2696|consensus
Probab=69.17 E-value=11 Score=40.45 Aligned_cols=49 Identities=16% Similarity=0.091 Sum_probs=34.6
Q ss_pred EEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHH
Q psy3403 430 CVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVA 478 (511)
Q Consensus 430 LVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are 478 (511)
++|+..+.-...-...-+..|..+.+.|.|||+|+|..|++.+......
T Consensus 200 ~~gy~tiyk~y~yid~~R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~ 248 (403)
T KOG2696|consen 200 YVGYYTIYKFYEYIDRIRPRISQMLILPPFQGKGLGSQLYEAIARDYLE 248 (403)
T ss_pred eeeeEEEeehhhhhhhhhhhhheeEEeccccCCchHHHHHHHHHHhhcc
Confidence 5565555332221122456788899999999999999999999966544
No 176
>KOG3698|consensus
Probab=69.14 E-value=6.4 Score=44.52 Aligned_cols=38 Identities=5% Similarity=0.002 Sum_probs=34.5
Q ss_pred ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 77 LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 77 gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
++.+.++.-.+ .|+..|+...+|+|+..-.+-+++|.-
T Consensus 832 ~~~k~m~~vll~tL~aNGsrGaf~~V~~dD~~~~~fys~ 870 (891)
T KOG3698|consen 832 HPMKKMIQVLLVTLAANGSRGAFLTVAIDDIERQKFYSE 870 (891)
T ss_pred hHHHHHHHHHHHHHHhcCCcceeEEechhHHHHHHHHHH
Confidence 88888888888 999999999999999999999999863
No 177
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=68.33 E-value=11 Score=39.43 Aligned_cols=58 Identities=12% Similarity=0.100 Sum_probs=38.8
Q ss_pred cEEEEEEE----CCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCC
Q psy3403 419 KFCFLAMD----EQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADD 480 (511)
Q Consensus 419 ~~~fVA~d----dGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G 480 (511)
..+||... +..+|||..=-.... ..--+.-|.|.|.||++|+|+.|++..-+.++..|
T Consensus 127 FlFYVl~e~d~~g~h~vGYFSKEK~s~----~~nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 127 FLFYVMTEVDDHGSHIVGYFSKEKVSA----EDYNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred eEEEEEEEecCCCcEEEEEeceecccc----CCCcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 44555543 235777754321111 12336678999999999999999999998887654
No 178
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=65.62 E-value=17 Score=31.30 Aligned_cols=51 Identities=27% Similarity=0.278 Sum_probs=35.3
Q ss_pred cEEEEEEECCe-EEEEEEEEEeccc-------------------cccceEEEEEEEEccCccCCcHHHHHH
Q psy3403 419 KFCFLAMDEQK-CVGAIVCKLDIHR-------------------KVIRRGYIAMLAVDENYRKRKIGSNLV 469 (511)
Q Consensus 419 ~~~fVA~ddGe-LVG~a~l~~~~~~-------------------~~~~~a~I~~IaV~PeyRGQGIGraLL 469 (511)
...+++.+++. +||++.+...... .....++|+.++|+|+||++.....|.
T Consensus 30 ~~h~lv~~~~~~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 30 SVHLLVRDKNTEVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred ccEEEEEECCCCEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 34455555555 9999987543221 123568999999999999988777664
No 179
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=65.59 E-value=21 Score=37.41 Aligned_cols=89 Identities=19% Similarity=0.183 Sum_probs=53.0
Q ss_pred EEEcCCcCcHHHHHHHHHHhcC----CCCCHHHHHHHH-----------hc-CCcEEEEEEE--CCeEEEEEEEEEecc-
Q psy3403 381 YVSYKSELQMPDIIKLIQKDLS----EPYSIYTYRYFI-----------HN-WPKFCFLAMD--EQKCVGAIVCKLDIH- 441 (511)
Q Consensus 381 irr~lteeDle~L~eL~~~~f~----~~~see~~e~~l-----------e~-~~~~~fVA~d--dGeLVG~a~l~~~~~- 441 (511)
++|+....|++++.++....-. -|-.++.+...+ .. .....||.++ .|+++|.+.+.....
T Consensus 3 vvRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a~vGl 82 (336)
T COG3138 3 VVRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEAAVGL 82 (336)
T ss_pred ccccccccCHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEecCCceEEeEEEEEEeecc
Confidence 4556788899999998766321 233333333322 11 1345566666 799999886532110
Q ss_pred -------------------------------ccccceEEEEEEEEccCccCCcHHHHHH
Q psy3403 442 -------------------------------RKVIRRGYIAMLAVDENYRKRKIGSNLV 469 (511)
Q Consensus 442 -------------------------------~~~~~~a~I~~IaV~PeyRGQGIGraLL 469 (511)
.......++..++++|+||.-|-|+.|-
T Consensus 83 ~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Lls 141 (336)
T COG3138 83 NDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLS 141 (336)
T ss_pred CCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhhh
Confidence 0122235678899999999777776543
No 180
>KOG2036|consensus
Probab=62.24 E-value=7.4 Score=45.13 Aligned_cols=31 Identities=26% Similarity=0.249 Sum_probs=28.2
Q ss_pred EEEEEEEEccCccCCcHHHHHHHHHHHHHHH
Q psy3403 448 GYIAMLAVDENYRKRKIGSNLVLKAIRAMVA 478 (511)
Q Consensus 448 a~I~~IaV~PeyRGQGIGraLL~aLie~Are 478 (511)
+.|-.|+|+|+|+++|+|++.++.+.++...
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG 645 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYFEG 645 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHHHHHHHhc
Confidence 5788899999999999999999999998764
No 181
>PLN03239 histone acetyltransferase; Provisional
Probab=61.28 E-value=16 Score=39.14 Aligned_cols=32 Identities=9% Similarity=0.101 Sum_probs=27.9
Q ss_pred EEEEEEEccCccCCcHHHHHHHHHHHHHHHCC
Q psy3403 449 YIAMLAVDENYRKRKIGSNLVLKAIRAMVADD 480 (511)
Q Consensus 449 ~I~~IaV~PeyRGQGIGraLL~aLie~Are~G 480 (511)
-+.-|.|.|.||++|+|+.|++..-+..+..|
T Consensus 215 NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 215 NLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred ceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 46678999999999999999999988887654
No 182
>PRK00756 acyltransferase NodA; Provisional
Probab=60.95 E-value=21 Score=34.75 Aligned_cols=104 Identities=7% Similarity=0.046 Sum_probs=62.4
Q ss_pred CCcCcHHHHHHHHHHhcCCC--CCH---HHHHHHHhcCCcEEEEEEECCeEEEEEEE---EEeccccccceEEEEEEEEc
Q psy3403 385 KSELQMPDIIKLIQKDLSEP--YSI---YTYRYFIHNWPKFCFLAMDEQKCVGAIVC---KLDIHRKVIRRGYIAMLAVD 456 (511)
Q Consensus 385 lteeDle~L~eL~~~~f~~~--~se---e~~e~~le~~~~~~fVA~ddGeLVG~a~l---~~~~~~~~~~~a~I~~IaV~ 456 (511)
+...|--++.++++..|... +.. +.-+.|.-..+..-.|+++..-+.+-+.+ ++......--.++++.++|.
T Consensus 15 L~ladH~eLaeFfr~tYgptGafnakpFeG~RSWAGARPElRaIgyD~~GVaAH~G~LRRFIkVg~vDlLVaElGLygVR 94 (196)
T PRK00756 15 LELSDHAELAEFFRKTYGPTGAFNAKPFEGGRSWAGARPELRAIAYDSHGVAAHMGLLRRFIKVGEVDLLVAELGLYGVR 94 (196)
T ss_pred cccchhHHHHHHHHHhcCCcccccccccCcCcccccCCceeEEEeecCccHhHhHHHHhhhheecccceeEEEeeeeeec
Confidence 44556777888888877521 111 11122333335555666665444332221 11111111235889999999
Q ss_pred cCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEe
Q psy3403 457 ENYRKRKIGSNLVLKAIRAMVADDADEVVLETE 489 (511)
Q Consensus 457 PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~ 489 (511)
|+..|.||+..+ ..+.-.++++|..-.+-.|.
T Consensus 95 pDLEGlGi~~S~-r~m~PvLq~LgVPF~FGtVR 126 (196)
T PRK00756 95 PDLEGLGIAHSI-RAMYPVLQELGVPFAFGTVR 126 (196)
T ss_pred cccccccchhhH-HHHHHHHHhcCCCeecccch
Confidence 999999999876 56667777889887777775
No 183
>PTZ00064 histone acetyltransferase; Provisional
Probab=59.80 E-value=14 Score=41.33 Aligned_cols=59 Identities=14% Similarity=0.141 Sum_probs=38.8
Q ss_pred CcEEEEEEE----CCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCC
Q psy3403 418 PKFCFLAMD----EQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADD 480 (511)
Q Consensus 418 ~~~~fVA~d----dGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G 480 (511)
+..+||... +-.+|||..=-.... ..--+.-|.|.|.||++|+|+.||+..-+..+..|
T Consensus 355 pFlFYVLtE~D~~G~HiVGYFSKEK~S~----~~nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 355 PFLFYIVTEVDEEGCHIVGYFSKEKVSL----LHYNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred ceEEEEEEEecCCCcEEEEEecccccCc----ccCceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 344555542 235777754221111 12246678999999999999999999888887654
No 184
>KOG2779|consensus
Probab=59.64 E-value=44 Score=36.09 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=76.8
Q ss_pred EEcCCcCcHHHHHHHHHHhc-----CCCCCHHHHHHHHhcCCc--EEEEEEE-CCeEEEEEEEEEeccc-------cccc
Q psy3403 382 VSYKSELQMPDIIKLIQKDL-----SEPYSIYTYRYFIHNWPK--FCFLAMD-EQKCVGAIVCKLDIHR-------KVIR 446 (511)
Q Consensus 382 rr~lteeDle~L~eL~~~~f-----~~~~see~~e~~le~~~~--~~fVA~d-dGeLVG~a~l~~~~~~-------~~~~ 446 (511)
.|.+.+.|++++.+|+.... ...+++++++.++..... ..||++. +|++-+|+.+...+.. ....
T Consensus 263 ~R~me~kDvp~V~~Ll~~yl~qf~la~~f~~eev~Hwf~p~e~VV~syVvesp~g~ITDF~SFy~lpsTv~~~~~~ktl~ 342 (421)
T KOG2779|consen 263 LREMEEKDVPAVFRLLRNYLKQFELAPVFDEEEVEHWFLPRENVVYSYVVESPNGKITDFCSFYSLPSTVMGNPKYKTLQ 342 (421)
T ss_pred cccccccchHHHHHHHHHHHHheecccccCHHHhHhhcccccceEEEEEEECCCCcccceeeEEeccccccCCCCcceee
Confidence 34578889999999987743 267778888888754433 3456655 8899898877543321 0112
Q ss_pred eEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEE
Q psy3403 447 RGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVR 506 (511)
Q Consensus 447 ~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~ 506 (511)
.+|.. ..|..+-+ -..||..++-.|+..|+........-.| -.|.++++|-.
T Consensus 343 aaYly-Y~v~~~t~----~~~lvnDalilak~~gfDVFNAld~meN---~~fl~~LkFg~ 394 (421)
T KOG2779|consen 343 AAYLY-YNVATSTP----LLQLVNDALILAKQKGFDVFNALDLMEN---ESFLKDLKFGP 394 (421)
T ss_pred eeeEE-EeccCCcc----HHHHHHHHHHHHHhcCCceeehhhhhhh---hhHHHhcCcCc
Confidence 24443 33433311 3578888888998889886665544455 57999999975
No 185
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=55.75 E-value=52 Score=29.59 Aligned_cols=67 Identities=12% Similarity=0.079 Sum_probs=45.3
Q ss_pred EEEECCeEEEEEEEEEeccc--cccceEEEEEEEEccCccC-CcHHHHHHHHHHHHHHHCCCCE-EEEEEecCCHH
Q psy3403 423 LAMDEQKCVGAIVCKLDIHR--KVIRRGYIAMLAVDENYRK-RKIGSNLVLKAIRAMVADDADE-VVLETEITNRP 494 (511)
Q Consensus 423 VA~ddGeLVG~a~l~~~~~~--~~~~~a~I~~IaV~PeyRG-QGIGraLL~aLie~Are~G~~r-I~L~V~~~N~~ 494 (511)
-++.++..=|.+++...... .....+++..++|.+..|| .|++..+..++.+. ..+ +.-.+.++|+.
T Consensus 13 ~~y~~~~y~~~AIvt~e~~~~~~~~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~~-----fp~~L~Wrsr~~n~~ 83 (108)
T cd04266 13 TVIIAGDYEGAAILTWEGPDGSTPEKIAYLDKFAVLPKAQGSDGIADILFNAMLDG-----FPNELIWRSRKDNPV 83 (108)
T ss_pred EEEEeCCCcEEEEEecCCCCccCCCCceEEEEEEEccccccccchHHHHHHHHHHc-----CCCceEEEeCCCCcc
Confidence 33445555566666543211 0235789999999999997 89999999988873 333 66677777753
No 186
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=55.53 E-value=38 Score=32.60 Aligned_cols=92 Identities=15% Similarity=0.242 Sum_probs=58.7
Q ss_pred cCceEEEeC--CCCCChhHHHHHHhhhC--------CCCccHHHHHHHHHh--CCCeEEEE----eCCeEEEEEEeeccc
Q psy3403 2 IGGIKYVSY--KSELQMPDIIKLIQKDL--------SEPYSIYTYRYFIHN--WPKFCFLM----DQLKTINIIENDTAT 65 (511)
Q Consensus 2 ~~~i~y~~~--~~e~dl~~I~~l~~~~L--------sEpYsi~~yryfl~~--wP~l~~~A----~~g~~vG~i~~~~~~ 65 (511)
+.++.+... .++.++.+|..|....- .=.||.-+.+..|.- |-+-+.++ ..+|.||||-+--..
T Consensus 21 P~gF~W~~~dl~d~~~l~ely~lL~~nYVEDdd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~~~~~kLvgfIsaip~~ 100 (162)
T PF01233_consen 21 PDGFEWSTLDLNDDEELKELYELLNENYVEDDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRVKSSKKLVGFISAIPAT 100 (162)
T ss_dssp STTEEEEE--TTSHHHHHHHHHHHHHHSSBTTTSSEEE---HHHHHHHHTSTT--GGGEEEEEETTTTEEEEEEEEEEEE
T ss_pred CCCCEEEecCCCCHHHHHHHHHHHHhcCccCCcceEEeeCCHHHHhheeeCcCCccceEEEEEECCCCEEEEEEccceEE
Confidence 345556555 57788999999987765 445999999988872 32222343 379999999986644
Q ss_pred CCccceEEecc--------------ChhhHHHHhhh-hccccC
Q psy3403 66 QSIRSALNNTT--------------LVPSNLNSESK-DVEDSN 93 (511)
Q Consensus 66 ~~~rghiv~~a--------------gig~~L~~~~~-~~~~~~ 93 (511)
-..++.++.++ +++--|..+-. .+-..|
T Consensus 101 irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~g 143 (162)
T PF01233_consen 101 IRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQG 143 (162)
T ss_dssp EEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT
T ss_pred EEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcC
Confidence 45577776555 77777776665 544444
No 187
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=53.71 E-value=61 Score=33.00 Aligned_cols=80 Identities=13% Similarity=0.099 Sum_probs=59.5
Q ss_pred CCccHHHHHHHHH-hCCCeEEEE--eCCeEEEEEEeecccCCccceEEec-------cChhhHHHHhhh-hccccCccEE
Q psy3403 29 EPYSIYTYRYFIH-NWPKFCFLM--DQLKTINIIENDTATQSIRSALNNT-------TLVPSNLNSESK-DVEDSNCNIT 97 (511)
Q Consensus 29 EpYsi~~yryfl~-~wP~l~~~A--~~g~~vG~i~~~~~~~~~rghiv~~-------agig~~L~~~~~-~~~~~~~~ev 97 (511)
+|-+..-|+-||. .|.+..++. .+|+.||.-+.++-.+++ ..|=.+ -.+|+-.+...| ..++.|-..+
T Consensus 126 ~~~~~~~y~~Fl~~~~~~t~~~ey~~~g~LiaVav~D~l~d~l-SAVY~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~ 204 (240)
T PRK01305 126 DPPSRDQYAQFLEDSWVNTRFIEFRGDGKLVAVAVTDVLDDGL-SAVYTFYDPDEEHRSLGTFAILWQIELAKRLGLPYV 204 (240)
T ss_pred CCCCHHHHHHHHhcCCCCcEEEEEEeCCeEEEEEEEeccCCce-eeEEEeeCCCccccCCHHHHHHHHHHHHHHcCCCeE
Confidence 4557777777777 566666666 699999999999966654 445222 189999999999 7778999999
Q ss_pred EEEEeecChhhh
Q psy3403 98 VICHSYDNTQSQ 109 (511)
Q Consensus 98 ~LEvr~sN~~A~ 109 (511)
||=--+.+.+..
T Consensus 205 YLGY~I~~c~kM 216 (240)
T PRK01305 205 YLGYWIKGSRKM 216 (240)
T ss_pred eeeEEECCCCcc
Confidence 997776665543
No 188
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=53.55 E-value=1.1e+02 Score=32.82 Aligned_cols=102 Identities=15% Similarity=0.188 Sum_probs=63.9
Q ss_pred EEEEcCCcCcHHHHHHHHHHhcCC-CCCHHH------HHHHHhcC----CcEEEEEEECC--eEEEEEEEEE---ecccc
Q psy3403 380 KYVSYKSELQMPDIIKLIQKDLSE-PYSIYT------YRYFIHNW----PKFCFLAMDEQ--KCVGAIVCKL---DIHRK 443 (511)
Q Consensus 380 ~irr~lteeDle~L~eL~~~~f~~-~~see~------~e~~le~~----~~~~fVA~ddG--eLVG~a~l~~---~~~~~ 443 (511)
..+......+++.+..++...+-+ .+.-.+ |..|.-.. .++.++..-.+ ++|||+.... ...+.
T Consensus 82 c~idv~N~~ql~dv~~lL~eNYVED~~ag~rf~Y~~EFl~Wal~~pg~kK~whigvRvk~t~klVaFIsa~p~~v~vRgK 161 (451)
T COG5092 82 CVIDVANKKQLEDVFVLLEENYVEDIYAGHRFRYSVEFLQWALDGPGGKKRWHIGVRVKGTQKLVAFISAKPHLVSVRGK 161 (451)
T ss_pred eeEeccccchhHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHhhcCCCCceeeEEEEEEcccceeEEEEecceeEEEEccc
Confidence 344445666788888887765532 111111 12222111 23455555444 8999996532 11222
Q ss_pred ccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCC
Q psy3403 444 VIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDA 481 (511)
Q Consensus 444 ~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~ 481 (511)
....+++..++|+.+.|++.+.-.|++++.+.+...|+
T Consensus 162 ~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~~i 199 (451)
T COG5092 162 RSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANVDGI 199 (451)
T ss_pred ccccceEEEEEEehhhhhCccchHHHHHHHHhhhhhhh
Confidence 34578899999999999999999999999998865543
No 189
>PRK04531 acetylglutamate kinase; Provisional
Probab=50.17 E-value=51 Score=35.84 Aligned_cols=92 Identities=13% Similarity=0.122 Sum_probs=63.2
Q ss_pred CcCcHHHHHHHHHHhcCCCCCHHHHHHHHhcCCcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHH
Q psy3403 386 SELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIG 465 (511)
Q Consensus 386 teeDle~L~eL~~~~f~~~~see~~e~~le~~~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIG 465 (511)
.+-|++.+.++....|........+. . ...+-++.++..=|.+.+... +...++..++|.+..||.|++
T Consensus 260 ~~~d~~~l~~ll~~sf~r~~~~~y~~----~--~~~~~~y~~~~y~~~Aiv~~~-----~~~~~Ldkf~v~~~~~~~~v~ 328 (398)
T PRK04531 260 DELDLERLNLLIESSFGRTLKPDYFD----T--TQLLRAYVSENYRAAAILTET-----GGGPYLDKFAVLDDARGEGLG 328 (398)
T ss_pred hhcCHHHHHHHHhhhcccchHHHHhc----c--CCceEEEEeCCCcEEEEEecC-----CCceEeEEEEEccchhhcChH
Confidence 34488889998877776544433222 2 234444445655566666542 256899999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEEecCCH
Q psy3403 466 SNLVLKAIRAMVADDADEVVLETEITNR 493 (511)
Q Consensus 466 raLL~aLie~Are~G~~rI~L~V~~~N~ 493 (511)
..+...+.+.. .+++..+.++|+
T Consensus 329 d~vf~~~~~~~-----~~L~Wrsr~~n~ 351 (398)
T PRK04531 329 RAVWNVMREET-----PQLFWRSRHNNT 351 (398)
T ss_pred HHHHHHHHhhC-----CceEEEcCCCCC
Confidence 99999887765 356777777775
No 190
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=49.31 E-value=17 Score=40.09 Aligned_cols=59 Identities=10% Similarity=0.073 Sum_probs=38.9
Q ss_pred CcEEEEEEE----CCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCC
Q psy3403 418 PKFCFLAMD----EQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADD 480 (511)
Q Consensus 418 ~~~~fVA~d----dGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G 480 (511)
+..+||... +-.+|||..=-... ...--+.-|.|.|.||++|+|+.||+..-+..+..|
T Consensus 277 ~FlFYvl~e~d~~g~h~vGyFSKEk~s----~~~~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 277 LFLFYVLCECDDRGCHMVGYFSKEKHS----EEDYNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred ceEEEEEEEecCCCcEEEEEecccccC----cCCCceEEEEecchhhhcchhheehhheehhhhccC
Confidence 344555543 23678775432111 111246678999999999999999998888887654
No 191
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins. Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....
Probab=46.46 E-value=10 Score=27.79 Aligned_cols=33 Identities=39% Similarity=0.768 Sum_probs=26.3
Q ss_pred ccccCC-cccccccccccCCCccccccCCCCcccc
Q psy3403 136 TECLEP-DECVNNSQLTNNSSSYSCKNCDNGHILH 169 (511)
Q Consensus 136 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (511)
.||.++ +.|..+..=.|...||.|. |..|..+.
T Consensus 3 dEC~~~~~~C~~~~~C~N~~Gsy~C~-C~~Gy~~~ 36 (42)
T PF07645_consen 3 DECAEGPHNCPENGTCVNTEGSYSCS-CPPGYELN 36 (42)
T ss_dssp STTTTTSSSSSTTSEEEEETTEEEEE-ESTTEEEC
T ss_pred cccCCCCCcCCCCCEEEcCCCCEEee-CCCCcEEC
Confidence 367764 4787788888899999998 99998743
No 192
>KOG3396|consensus
Probab=45.98 E-value=63 Score=30.60 Aligned_cols=56 Identities=11% Similarity=0.013 Sum_probs=43.8
Q ss_pred CCeEEEEEEeec-----ccCCccceEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChh
Q psy3403 52 QLKTINIIENDT-----ATQSIRSALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQ 107 (511)
Q Consensus 52 ~g~~vG~i~~~~-----~~~~~rghiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~ 107 (511)
.++|||.--=-| ++-+.||||-.+. +||+-|+...+ .-++.||=-+-||-...|-+
T Consensus 63 s~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~ 132 (150)
T KOG3396|consen 63 SEKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVK 132 (150)
T ss_pred cCeEEEEEEEEEehhhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhh
Confidence 678888655555 2335599996655 99999999999 66669999999999998854
No 193
>KOG3014|consensus
Probab=44.98 E-value=1.2e+02 Score=31.30 Aligned_cols=32 Identities=25% Similarity=0.088 Sum_probs=27.6
Q ss_pred ceEEEEEEEEccCccCCcHHHHHHHHHHHHHH
Q psy3403 446 RRGYIAMLAVDENYRKRKIGSNLVLKAIRAMV 477 (511)
Q Consensus 446 ~~a~I~~IaV~PeyRGQGIGraLL~aLie~Ar 477 (511)
-.+.|..++|.+..|++||++.|++.+.....
T Consensus 182 ~~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~ 213 (257)
T KOG3014|consen 182 AICGISRIWVSSLRRRKGIASLLLDVARCNFV 213 (257)
T ss_pred cEeeeEEEEeehhhhhhhhHHHHHHHHHHhhh
Confidence 34678999999999999999999998877654
No 194
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=43.88 E-value=1.4e+02 Score=31.47 Aligned_cols=88 Identities=13% Similarity=0.077 Sum_probs=65.0
Q ss_pred EEEEEECCeEEEEEEEEEecccc--ccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHC---------CCC-EEEEEE
Q psy3403 421 CFLAMDEQKCVGAIVCKLDIHRK--VIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVAD---------DAD-EVVLET 488 (511)
Q Consensus 421 ~fVA~ddGeLVG~a~l~~~~~~~--~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~---------G~~-rI~L~V 488 (511)
..++...+.+|+.+.+....... ..-...|..+.|..=|..-|+-..|++.++-.+|+. |.. .+..++
T Consensus 171 T~IIvYRetPIAiisl~~~~~~St~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si~ll~d~ 250 (304)
T PF11124_consen 171 THIIVYRETPIAIISLVPNKDQSTKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSIKLLVDV 250 (304)
T ss_pred ceEEEEcCCceEEEEeccccccCCCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceEEEEEEe
Confidence 44555678899999887654321 122456888999999999999999988887776651 221 344556
Q ss_pred ecCCHHHHHHHHHCCCEEee
Q psy3403 489 EITNRPALKLYENLGFVRDK 508 (511)
Q Consensus 489 ~~~N~~AikFYEKlGFe~vG 508 (511)
...+....++.++.||....
T Consensus 251 YSFD~~~~k~L~~~gF~~i~ 270 (304)
T PF11124_consen 251 YSFDKDMKKTLKKKGFKKIS 270 (304)
T ss_pred eeccHHHHHHHHHCCCeeee
Confidence 77889999999999999876
No 195
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=43.13 E-value=1.6e+02 Score=31.78 Aligned_cols=111 Identities=12% Similarity=0.053 Sum_probs=66.0
Q ss_pred CcCcHHHHHHHHHHhcCC-----CCCHHHHHHHHhcCC--cEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccC
Q psy3403 386 SELQMPDIIKLIQKDLSE-----PYSIYTYRYFIHNWP--KFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDEN 458 (511)
Q Consensus 386 teeDle~L~eL~~~~f~~-----~~see~~e~~le~~~--~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~Pe 458 (511)
++++++.+..+....+.. ..+.+.|....+..+ -..++|..+|++||++........ .+-.-.+-..+
T Consensus 211 ~~~~~~~f~~~Y~~Ty~k~~~~~yLt~~FF~~l~~~m~~~~~l~~A~~~g~~Va~aL~l~~~~~-----LyGRYwG~~~~ 285 (370)
T PF04339_consen 211 TDEDWDRFYRLYQNTYAKRWGRPYLTREFFEQLAETMPEQVVLVVARRDGQPVAFALCLRGDDT-----LYGRYWGCDEE 285 (370)
T ss_pred CHHHHHHHHHHHHHHHHhhCCChhhcHHHHHHHHHhCcCCEEEEEEEECCeEEEEEEEEEeCCE-----EEEeeeccccc
Confidence 455677888887776542 234555666555443 345677789999999988765432 22222223344
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEee
Q psy3403 459 YRKRKIGSNLVLKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRDK 508 (511)
Q Consensus 459 yRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~vG 508 (511)
+.+.= -....=..+++|.++|++++...+.-+. | ...||+++.
T Consensus 286 ~~~LH-Fe~cYYq~Ie~aI~~Gl~~f~~GaqGEH----K--~~RGf~P~~ 328 (370)
T PF04339_consen 286 IPFLH-FELCYYQGIEYAIEHGLRRFEPGAQGEH----K--IARGFEPVP 328 (370)
T ss_pred ccCcc-hHHHHHHHHHHHHHcCCCEEECCcchhH----H--HHcCCcccc
Confidence 43321 1223457889999999998777653222 2 145787664
No 196
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=43.13 E-value=66 Score=33.36 Aligned_cols=66 Identities=14% Similarity=0.064 Sum_probs=45.2
Q ss_pred eEEEEeCCeEEEEEEeecccCCccceEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhh
Q psy3403 46 FCFLMDQLKTINIIENDTATQSIRSALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILY 113 (511)
Q Consensus 46 l~~~A~~g~~vG~i~~~~~~~~~rghiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~ 113 (511)
..|+..+|++|----... +.+.-|-|.-+. |+|++||.+.- ++-+.|+.-+ |=+-+.|..|.++|-
T Consensus 179 ~~f~~~d~~iVa~A~t~a-~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~-L~~~~~N~~A~~iY~ 253 (268)
T COG3393 179 TYFLEGDGKIVAKAETAA-ENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPC-LFVNSDNPVARRIYQ 253 (268)
T ss_pred EEEEccCCcEEEeeeccc-cCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCeeE-EEEecCCHHHHHHHH
Confidence 455565567775444333 555456664444 99999999888 7777776544 445589999999995
No 197
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=42.30 E-value=1.2e+02 Score=27.98 Aligned_cols=74 Identities=12% Similarity=-0.041 Sum_probs=52.8
Q ss_pred HHHHHHHHH-hCCCeEEEE--eCCeEEEEEEeecccCCccceEEec-----c--ChhhHHHHhhh-hccccCccEEEEEE
Q psy3403 33 IYTYRYFIH-NWPKFCFLM--DQLKTINIIENDTATQSIRSALNNT-----T--LVPSNLNSESK-DVEDSNCNITVICH 101 (511)
Q Consensus 33 i~~yryfl~-~wP~l~~~A--~~g~~vG~i~~~~~~~~~rghiv~~-----a--gig~~L~~~~~-~~~~~~~~ev~LEv 101 (511)
..-|+-||. .|....++. .+|+.||.-+.++-.+++ ..|=.+ + .+|+-.+..-| .-|+.|-..+||==
T Consensus 25 ~~~y~~fl~~~~~~t~~~~~~~~~kLiav~v~D~l~~gl-SaVY~fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YLGY 103 (128)
T PF04377_consen 25 QEQYRRFLCSSPLGTYHLEYRLDGKLIAVAVVDILPDGL-SAVYTFYDPDYSKRSLGTYSILREIELARELGLPYYYLGY 103 (128)
T ss_pred HHHHHHHHhCCCCCCEEEEEEeCCeEEEEEEeecccchh-hheeeeeCCCccccCcHHHHHHHHHHHHHHcCCCEEeeCe
Confidence 455555555 788888887 799999999999955554 334111 1 89999998888 77779999998854
Q ss_pred eecChh
Q psy3403 102 SYDNTQ 107 (511)
Q Consensus 102 r~sN~~ 107 (511)
-+.+-|
T Consensus 104 ~I~~c~ 109 (128)
T PF04377_consen 104 WIHGCP 109 (128)
T ss_pred EeCCCC
Confidence 444443
No 198
>KOG2747|consensus
Probab=41.84 E-value=31 Score=37.55 Aligned_cols=31 Identities=13% Similarity=0.150 Sum_probs=25.8
Q ss_pred EEEEEEEccCccCCcHHHHHHHHHHHHHHHC
Q psy3403 449 YIAMLAVDENYRKRKIGSNLVLKAIRAMVAD 479 (511)
Q Consensus 449 ~I~~IaV~PeyRGQGIGraLL~aLie~Are~ 479 (511)
-+.-|.|.|.||++|+|+.|++-.-+..+..
T Consensus 262 NlaCILtLPpyQRkGYGklLIdFSYeLSr~E 292 (396)
T KOG2747|consen 262 NLACILTLPPYQRKGYGKLLIDFSYELSRRE 292 (396)
T ss_pred ceeeeeecChhhhcccchhhhhhhhhhhccc
Confidence 3666899999999999999999877777543
No 199
>PF15288 zf-CCHC_6: Zinc knuckle
Probab=40.59 E-value=26 Score=26.30 Aligned_cols=34 Identities=32% Similarity=0.488 Sum_probs=26.5
Q ss_pred ccccCCC-CcccccCCCCCCCCCCccccccCCCcc
Q psy3403 158 SCKNCDN-GHILHDSSHFNTSQPKSLAPINNGPKK 191 (511)
Q Consensus 158 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (511)
.|++|.. ||+--+-.=-.-.+...++|.+-|.++
T Consensus 3 kC~~CG~~GH~~t~k~CP~~~~~~a~~p~~~g~~~ 37 (40)
T PF15288_consen 3 KCKNCGAFGHMRTNKRCPMYCWSGALAPQPVGMTK 37 (40)
T ss_pred cccccccccccccCccCCCCCCCCCCCCccccccc
Confidence 6999975 888877776666778888888888765
No 200
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=36.42 E-value=23 Score=26.69 Aligned_cols=30 Identities=10% Similarity=-0.037 Sum_probs=25.2
Q ss_pred ChhhHHHHhhh-hccccCccEEEEEEeecChhhhHhhhc
Q psy3403 77 LVPSNLNSESK-DVEDSNCNITVICHSYDNTQSQDILYN 114 (511)
Q Consensus 77 gig~~L~~~~~-~~~~~~~~ev~LEvr~sN~~A~~l~~~ 114 (511)
|||++|+..++ ..+..|+. .|..++.+|-.
T Consensus 97 Gig~~Ll~~~~~~~~~~g~~--------~~~~~~~~~~~ 127 (156)
T COG0454 97 GIGSALLEAALEWARKRGIS--------LNRLALEVYEK 127 (156)
T ss_pred chHHHHHHHHHHHHHHcCce--------ehHHHHHHHHh
Confidence 99999999999 77777776 78888888865
No 201
>PF01239 PPTA: Protein prenyltransferase alpha subunit repeat; InterPro: IPR002088 Protein prenylation is the posttranslational attachment of either a farnesyl group or a geranylgeranyl group via a thioether linkage (-C-S-C-) to a cysteine at or near the carboxyl terminus of the protein. Farnesyl and geranylgeranyl groups are polyisoprenes, unsaturated hydrocarbons with a multiple of five carbons; the chain is 15 carbons long in the farnesyl moiety and 20 carbons long in the geranylgeranyl moiety. There are three different protein prenyltransferases in humans: farnesyltransferase (FT) and geranylgeranyltransferase 1 (GGT1) share the same motif (the CaaX box) around the cysteine in their substrates, and are thus called CaaX prenyltransferases, whereas geranylgeranyltransferase 2 (GGT2, also called Rab geranylgeranyltransferase) recognises a different motif and is thus called a non-CaaX prenyltransferase. Protein prenyltransferases are currently known only in eukaryotes, but they are widespread, being found in vertebrates, insects, nematodes, plants, fungi and protozoa, including several parasites. Each protein consists of two subunits, alpha and beta; the alpha subunit of FT and GGT1 is encoded by the same gene, FNTA. The alpha subunit is thought to participate in a stable complex with the isoprenyl substrate; the beta subunit binds the peptide substrate. In the alpha subunits of both types of protein prenyltransferases, seven tetratricopeptide repeats are formed by pairs of helices that are stabilised by conserved intercalating residues. The alpha subunits of GGT2 in mammals and plants also have an immunoglobulin-like domain between the fifth and sixth tetratricopeptide repeat, as well as leucine-rich repeats at the carboxyl terminus. The functions of these additional domains in GGT2 are as yet undefined, but they are apparently not directly involved in the interaction with substrates and Rab escort proteins. The tetratricopeptide repeats of the alpha subunit form a right-handed superhelix, which embraces the (alpha-alpha)6 barrel of the beta subunit []. ; GO: 0008318 protein prenyltransferase activity, 0018342 protein prenylation; PDB: 1S63_A 1LD7_A 1LD8_A 2H6G_A 1SA4_A 1MZC_A 1TN6_A 2F0Y_A 2H6H_A 2H6F_A ....
Probab=36.23 E-value=33 Score=23.23 Aligned_cols=26 Identities=27% Similarity=0.525 Sum_probs=19.4
Q ss_pred ChhHHHHHHhhhCCCCccHHHHHHHHH
Q psy3403 15 QMPDIIKLIQKDLSEPYSIYTYRYFIH 41 (511)
Q Consensus 15 dl~~I~~l~~~~LsEpYsi~~yryfl~ 41 (511)
+|.-+..++..+ +..|+.|.||.++-
T Consensus 2 El~~~~~~l~~~-pknys~W~yR~~ll 27 (31)
T PF01239_consen 2 ELEFTKKALEKD-PKNYSAWNYRRWLL 27 (31)
T ss_dssp HHHHHHHHHHHS-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC-cccccHHHHHHHHH
Confidence 355666777666 56799999999874
No 202
>smart00179 EGF_CA Calcium-binding EGF-like domain.
Probab=34.61 E-value=30 Score=23.60 Aligned_cols=31 Identities=32% Similarity=0.723 Sum_probs=22.4
Q ss_pred ccccCCcccccccccccCCCccccccCCCCcc
Q psy3403 136 TECLEPDECVNNSQLTNNSSSYSCKNCDNGHI 167 (511)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (511)
.+|..+..|.++..-.|...+|.|. |..|..
T Consensus 3 ~~C~~~~~C~~~~~C~~~~g~~~C~-C~~g~~ 33 (39)
T smart00179 3 DECASGNPCQNGGTCVNTVGSYRCE-CPPGYT 33 (39)
T ss_pred ccCcCCCCcCCCCEeECCCCCeEeE-CCCCCc
Confidence 3565545677766667778899996 988865
No 203
>COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane]
Probab=32.33 E-value=5.5e+02 Score=28.32 Aligned_cols=84 Identities=11% Similarity=-0.021 Sum_probs=61.2
Q ss_pred cCCCCCHHHHHHHHhcC----CcEEEEEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHH
Q psy3403 401 LSEPYSIYTYRYFIHNW----PKFCFLAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAM 476 (511)
Q Consensus 401 f~~~~see~~e~~le~~----~~~~fVA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~A 476 (511)
|...|..+.+....... ....+....+|++|+........ ...+-....++|++-.--=|..|+-.+|+++
T Consensus 250 f~~~~t~~fl~dL~~~~~~d~~~rl~gL~~G~~lvAV~~~lr~~-----~t~h~~l~a~dpe~~~~SPG~~lf~d~i~~~ 324 (406)
T COG5653 250 FRAGWTRDFLRDLFTQRAEDGSGRLFGLHAGGRLVAVHGLLRQG-----GTYHAWLGAIDPEFARASPGMLLFLDLIEWA 324 (406)
T ss_pred cccchHHHHHHHHHhccCcCCceEEEEEeeCCEEEEEEeeeccC-----CEEEEEeeccCHHHhhcCchHHHHHHHHHHH
Confidence 34677777766655322 23345556688999988776532 3444455688999998888999999999999
Q ss_pred HHCCCCEEEEEEe
Q psy3403 477 VADDADEVVLETE 489 (511)
Q Consensus 477 re~G~~rI~L~V~ 489 (511)
..+|..++-+.|.
T Consensus 325 ~~~g~~~~DfgvG 337 (406)
T COG5653 325 CGQGLARFDFGVG 337 (406)
T ss_pred hcCCCeEEeecCC
Confidence 9999998888774
No 204
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=30.98 E-value=31 Score=37.03 Aligned_cols=56 Identities=14% Similarity=0.143 Sum_probs=33.7
Q ss_pred CcEEEEEEECC----eEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHH
Q psy3403 418 PKFCFLAMDEQ----KCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMV 477 (511)
Q Consensus 418 ~~~~fVA~ddG----eLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Ar 477 (511)
+..++|....| .+|||..=-.. ....--+.-|.+.|.||++|+|..|++-.-...+
T Consensus 233 pflFYvl~~~~~~~~h~vGyFSKEK~----S~~~yNLaCILtLP~yQRrGYG~lLIdFSY~Ls~ 292 (395)
T COG5027 233 PFLFYVLTERGDTGCHLVGYFSKEKE----SEQDYNLACILTLPPYQRRGYGKLLIDFSYLLSQ 292 (395)
T ss_pred ceEEEEEEEcCCcceeeeeeechhhc----ccccCceEEEEecChhHhcccceEeeeeeeeccc
Confidence 44566665533 36666532111 1122346668899999999999988875444433
No 205
>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.
Probab=30.11 E-value=72 Score=31.05 Aligned_cols=82 Identities=17% Similarity=0.370 Sum_probs=42.1
Q ss_pred hccccCccEEEEEEeecChhhhHhhhcccccCCCC----CC-CccccccccccccccCCccccccc-----ccccCCCcc
Q psy3403 88 DVEDSNCNITVICHSYDNTQSQDILYNGVTNSNHN----DL-GSNKLSERYESTECLEPDECVNNS-----QLTNNSSSY 157 (511)
Q Consensus 88 ~~~~~~~~ev~LEvr~sN~~A~~l~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 157 (511)
.+|..|+.-..+-|--.|...++-.-+ -+...|- |+ .-.++........|...|+|-... .-.|...+|
T Consensus 130 ~lk~~gv~i~~VgvG~~~~~~L~~ias-~~~~~~~f~~~~~~~l~~~~~~l~~~~C~~~~~C~~~~~~c~~~C~~~~g~~ 208 (224)
T cd01475 130 KARALGIEMFAVGVGRADEEELREIAS-EPLADHVFYVEDFSTIEELTKKFQGKICVVPDLCATLSHVCQQVCISTPGSY 208 (224)
T ss_pred HHHHCCcEEEEEeCCcCCHHHHHHHhC-CCcHhcEEEeCCHHHHHHHhhhcccccCcCchhhcCCCCCccceEEcCCCCE
Confidence 566666655445554444444443322 1112221 11 113444555555666555664322 244666789
Q ss_pred ccccCCCCcccccC
Q psy3403 158 SCKNCDNGHILHDS 171 (511)
Q Consensus 158 ~~~~~~~~~~~~~~ 171 (511)
.|. |..|..||..
T Consensus 209 ~c~-c~~g~~~~~~ 221 (224)
T cd01475 209 LCA-CTEGYALLED 221 (224)
T ss_pred EeE-CCCCccCCCC
Confidence 995 9999888653
No 206
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=29.14 E-value=1.4e+02 Score=32.30 Aligned_cols=89 Identities=15% Similarity=0.172 Sum_probs=49.7
Q ss_pred hcCCcEEEEEEEC-CeEEEEEEEEEeccccccceEEEEEEEEcc--CccCCcHHHHHHHHHHHHHHHCCCCEEEEEEec-
Q psy3403 415 HNWPKFCFLAMDE-QKCVGAIVCKLDIHRKVIRRGYIAMLAVDE--NYRKRKIGSNLVLKAIRAMVADDADEVVLETEI- 490 (511)
Q Consensus 415 e~~~~~~fVA~dd-GeLVG~a~l~~~~~~~~~~~a~I~~IaV~P--eyRGQGIGraLL~aLie~Are~G~~rI~L~V~~- 490 (511)
..|....+...++ ++++|.+.+...........++|.. -| +|...-+-..++..+.+++++.++ +.|.++|
T Consensus 31 ~gw~~~~vgv~~d~~~v~aa~ll~~~~~~~g~~~~yipr---GPv~d~~d~ell~~f~~~Lk~~akk~~a--~~lridP~ 105 (406)
T PF02388_consen 31 RGWEVERVGVKDDGGEVAAAALLLRKKPFKGFKYAYIPR---GPVMDYSDEELLEFFLEELKKYAKKKRA--LFLRIDPN 105 (406)
T ss_dssp TTSEEEEEEEE-TTS-EEEEEEEEEEECTTTCEEEEETT-----EC-TT-HHHHHHHHHHHHHHHCTTTE--EEEEE--S
T ss_pred CCCeEEEEEEEeCCCeEEEEEEEEEeccCCceeEEEECC---CCCCCCCCHHHHHHHHHHHHHHHHHCCE--EEEEEeCc
Confidence 3444455555565 6777766554332221122444421 24 777778888899999999987655 4444332
Q ss_pred ----------------CCHHHHHHHHHCCCEEee
Q psy3403 491 ----------------TNRPALKLYENLGFVRDK 508 (511)
Q Consensus 491 ----------------~N~~AikFYEKlGFe~vG 508 (511)
.|...+..++++||+..+
T Consensus 106 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~G~~~~g 139 (406)
T PF02388_consen 106 VIYQERDEDGEPIEGEENDELIENLKALGFRHQG 139 (406)
T ss_dssp -EEECE-TTS-EEEE-S-THHHHHHHHTT-CCTS
T ss_pred hhhhhcccccccccCcchHHHHHHHHhcCceecC
Confidence 356788999999998754
No 207
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=28.86 E-value=1.3e+02 Score=26.24 Aligned_cols=28 Identities=14% Similarity=0.128 Sum_probs=24.6
Q ss_pred CCEEEEEEecCCHHHHHHHHHCCCEEee
Q psy3403 481 ADEVVLETEITNRPALKLYENLGFVRDK 508 (511)
Q Consensus 481 ~~rI~L~V~~~N~~AikFYEKlGFe~vG 508 (511)
+..++=.|...|..+++|.+.+|++...
T Consensus 56 Y~~l~N~V~~~N~~HIRfLk~lGA~f~~ 83 (86)
T PF11090_consen 56 YPVLWNFVWVGNKSHIRFLKSLGAVFHN 83 (86)
T ss_pred hhheeEEEEeCCHHHHHHHHhcCcEEcc
Confidence 6678888999999999999999998654
No 208
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=28.70 E-value=3e+02 Score=24.32 Aligned_cols=62 Identities=8% Similarity=0.142 Sum_probs=44.3
Q ss_pred EEEECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCH
Q psy3403 423 LAMDEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEITNR 493 (511)
Q Consensus 423 VA~ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~~N~ 493 (511)
-++.++..=|.+++.... ...+++..++|.+..++.|++..+...+.+.. ..+.-.+.++|+
T Consensus 13 ~~y~de~y~~~AIvt~~~----~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d~-----~~L~Wrsr~~n~ 74 (98)
T cd03173 13 ASYADEPLEGVAIVTYEG----NSIPYLDKFAVSDHLWLNNVTDNIFNLIRKDF-----PSLLWRVRENDA 74 (98)
T ss_pred EEEEcCCccEEEEEecCC----CCCEEEEEEEEcccccccCHHHHHHHHHHhhC-----CeeEEEeCCCCC
Confidence 334445555556655432 35789999999999999999999999887663 356667777664
No 209
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=26.70 E-value=1.8e+02 Score=33.09 Aligned_cols=61 Identities=8% Similarity=-0.076 Sum_probs=48.6
Q ss_pred ECCeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEEEec
Q psy3403 426 DEQKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLETEI 490 (511)
Q Consensus 426 ddGeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~V~~ 490 (511)
.+|++|||+.+...... ....++-+--+|+.= +|+...|+..++.++++.|+.++.+...|
T Consensus 400 ~~g~VvaFa~l~~~~~~---~~~SlDlMR~sp~ap-~g~mdfLf~~li~~aKe~G~~~fsLgmAp 460 (538)
T COG2898 400 NEGEVVAFANLMPTGGK---EGYSLDLMRRSPDAP-NGTMDFLFSELILWAKEEGYQRFSLGMAP 460 (538)
T ss_pred CCCCeEEEEeecccCCc---ceeEEEeeecCCCCC-chHHHHHHHHHHHHHHHcCCeEEecCCcc
Confidence 47889999999774432 445677666677665 79999999999999999999999987643
No 210
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=24.69 E-value=3.1e+02 Score=26.28 Aligned_cols=96 Identities=11% Similarity=0.105 Sum_probs=51.6
Q ss_pred eEEEeCCCCCChhHHHHHHhhhCC-----------------CCccHHHHHHHHHhCCCeEEEE--eCCeEEEEEEeeccc
Q psy3403 5 IKYVSYKSELQMPDIIKLIQKDLS-----------------EPYSIYTYRYFIHNWPKFCFLM--DQLKTINIIENDTAT 65 (511)
Q Consensus 5 i~y~~~~~e~dl~~I~~l~~~~Ls-----------------EpYsi~~yryfl~~wP~l~~~A--~~g~~vG~i~~~~~~ 65 (511)
.+|++| .|.|++.+..|....+. -|-|.-..|||-.. .-.||| .+|++.|+|...-.=
T Consensus 1 M~yR~f-~e~D~~aL~ald~a~qr~~dP~fd~lperer~gr~~tSl~Alrfy~Rs--gHSFvA~~e~~~~~GfvLAQaVW 77 (161)
T PF09390_consen 1 MRYRPF-TEPDFAALQALDLAAQRRTDPAFDGLPEREREGRLSTSLAALRFYERS--GHSFVAEDEGGELQGFVLAQAVW 77 (161)
T ss_dssp -EEE----GGGHHHHHHC--------------------STTS---HHHHHHHHCC--S--EEEE-ETTEEEEEEEEEEEE
T ss_pred Cccccc-CcccHHHHHHHhhhccccccccccccccccccccccCCHHHhhhhhcc--CCcEEEEccCCceeeeeehhHHh
Confidence 379999 77889998888544432 23567788999887 888999 578999999988733
Q ss_pred CCccceE--Eecc-------ChhhHHHHhhh-hccccCccEEEEEEee
Q psy3403 66 QSIRSAL--NNTT-------LVPSNLNSESK-DVEDSNCNITVICHSY 103 (511)
Q Consensus 66 ~~~rghi--v~~a-------gig~~L~~~~~-~~~~~~~~ev~LEvr~ 103 (511)
+|=|--| .-|+ ....-|+...+ .-=+.|+=||-|=+.-
T Consensus 78 QGdrptVlV~ri~~~~~~~~~~~~GLLrAvvKSAYDa~VYEv~l~l~p 125 (161)
T PF09390_consen 78 QGDRPTVLVRRILLAPGEPEEVYEGLLRAVVKSAYDAGVYEVHLHLDP 125 (161)
T ss_dssp -SSSEEEEEEEE---EESSHHHHHHHHHHHHHHHHHTT-SEEEE---T
T ss_pred cCCCceEEEEEeecCCCCcHHHHHHHHHHHHHhhhccceEEEEeeCCH
Confidence 3323333 2221 34445555555 4455777777766544
No 211
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=23.87 E-value=2.5e+02 Score=29.04 Aligned_cols=71 Identities=10% Similarity=0.071 Sum_probs=44.6
Q ss_pred HHHHHHHhCCCeEEEE-eCCeEEEEEEeecccCCccceEEecc--------ChhhHHHHhhh-hccccCccEEEEEEeec
Q psy3403 35 TYRYFIHNWPKFCFLM-DQLKTINIIENDTATQSIRSALNNTT--------LVPSNLNSESK-DVEDSNCNITVICHSYD 104 (511)
Q Consensus 35 ~yryfl~~wP~l~~~A-~~g~~vG~i~~~~~~~~~rghiv~~a--------gig~~L~~~~~-~~~~~~~~ev~LEvr~s 104 (511)
.+.-|+.+ -+=|++ ++|++|.-.++...-. .|+=+.|+ |+|+++..+.+ .-.+.|-.-.-= +.
T Consensus 157 s~e~Fl~~--G~Gf~i~~~~~iVs~~~s~~~~~--~~~EI~I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~WD---c~ 229 (265)
T PF12746_consen 157 SYEDFLKN--GFGFCILHDGEIVSGCSSYFVYE--NGIEIDIETHPEYRGKGLATAVAAAFILECLENGLYPSWD---CH 229 (265)
T ss_dssp SHHHHHHH----EEEEEETTEEEEEEEEEEEET--TEEEEEEEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE-E---ES
T ss_pred CHHHHHhc--CcEEEEEECCEEEEEEEEEEEEC--CEEEEEEEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCee---CC
Confidence 34566666 455666 8999998777776222 24445555 99999988888 555555443222 26
Q ss_pred ChhhhHhh
Q psy3403 105 NTQSQDIL 112 (511)
Q Consensus 105 N~~A~~l~ 112 (511)
|.++++|=
T Consensus 230 N~~S~~lA 237 (265)
T PF12746_consen 230 NLASIALA 237 (265)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 88888774
No 212
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.44 E-value=1.3e+02 Score=30.59 Aligned_cols=39 Identities=21% Similarity=0.227 Sum_probs=30.9
Q ss_pred HHHHHHHHCCCCEEEEEE---ecCCHHHHHHHHHCCCEEeeE
Q psy3403 471 KAIRAMVADDADEVVLET---EITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 471 aLie~Are~G~~rI~L~V---~~~N~~AikFYEKlGFe~vG~ 509 (511)
++++-++..|++++.+-+ .+-|.+.+.|++..||+.+..
T Consensus 108 Avv~aL~al~a~ri~vlTPY~~evn~~e~ef~~~~Gfeiv~~ 149 (238)
T COG3473 108 AVVEALNALGAQRISVLTPYIDEVNQREIEFLEANGFEIVDF 149 (238)
T ss_pred HHHHHHHhhCcceEEEeccchhhhhhHHHHHHHhCCeEEEEe
Confidence 345566667888888764 678999999999999998753
No 213
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=22.36 E-value=1.4e+02 Score=29.53 Aligned_cols=45 Identities=9% Similarity=0.095 Sum_probs=29.8
Q ss_pred CCeEEEE--eCC--eEEEEEEeecccCCc---------------cceE----------------------Eecc------
Q psy3403 44 PKFCFLM--DQL--KTINIIENDTATQSI---------------RSAL----------------------NNTT------ 76 (511)
Q Consensus 44 P~l~~~A--~~g--~~vG~i~~~~~~~~~---------------rghi----------------------v~~a------ 76 (511)
|..-+.+ ..+ ++||.+.... |.++ +||+ |-||
T Consensus 25 P~h~l~~l~~~~~p~il~~~~v~~-EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RIvRIAvhP~~q 103 (196)
T PF13718_consen 25 PNHRLFVLLQPGDPDILGVAQVAL-EGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARIVRIAVHPDLQ 103 (196)
T ss_dssp TTEEEEEEE-SS--SEEEEEEEEE-EE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEEEEEEE-CCC-
T ss_pred CcceeehhccCCCceEEEEEEEEe-cCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeEEEEEEChhhh
Confidence 5544443 777 9999998877 4432 5554 6677
Q ss_pred --ChhhHHHHhhh-hc
Q psy3403 77 --LVPSNLNSESK-DV 89 (511)
Q Consensus 77 --gig~~L~~~~~-~~ 89 (511)
|+|++|+...+ ..
T Consensus 104 ~~G~Gs~lL~~l~~~~ 119 (196)
T PF13718_consen 104 RMGYGSRLLQQLEQYA 119 (196)
T ss_dssp SSSHHHHHHHHHHHT-
T ss_pred cCCHHHHHHHHHHHHH
Confidence 99999999999 55
No 214
>smart00457 MACPF membrane-attack complex / perforin.
Probab=22.30 E-value=3e+02 Score=26.37 Aligned_cols=56 Identities=13% Similarity=0.124 Sum_probs=41.2
Q ss_pred CceEEEeC---CCCCChhHHHHHHhhhCCCCccHHHHHHHHHhCCCeEEEE--eCCeEEEE
Q psy3403 3 GGIKYVSY---KSELQMPDIIKLIQKDLSEPYSIYTYRYFIHNWPKFCFLM--DQLKTINI 58 (511)
Q Consensus 3 ~~i~y~~~---~~e~dl~~I~~l~~~~LsEpYsi~~yryfl~~wP~l~~~A--~~g~~vG~ 58 (511)
..|++..| .++..|..-..-.-+.|+.-|..-.|+.|+..|+..++.- .+|++.=+
T Consensus 6 ~~v~~~~y~~~~~~~~l~~~f~~~l~~Lp~~~~~~~~~~fi~~yGTH~i~s~~~Gg~~~~~ 66 (194)
T smart00457 6 WTVRNRLYSVKLDDIPLALEFLKALRDLPDQYNRGAYARFIDKYGTHYITSATLGGEYSLL 66 (194)
T ss_pred EEEEEEEEEecCCCCCcCHHHHHHHHhCccccCHHHHHHHHHHhCCeEEEeeeeeeeEEEE
Confidence 35777777 2345555555555678899999999999999999999974 66665444
No 215
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=22.28 E-value=7.1e+02 Score=26.98 Aligned_cols=86 Identities=12% Similarity=0.018 Sum_probs=60.3
Q ss_pred cEEEEEEECCeEEEEEEEEEeccccccce-----------------------------EEEEEEEEccCccCCcHHHHHH
Q psy3403 419 KFCFLAMDEQKCVGAIVCKLDIHRKVIRR-----------------------------GYIAMLAVDENYRKRKIGSNLV 469 (511)
Q Consensus 419 ~~~fVA~ddGeLVG~a~l~~~~~~~~~~~-----------------------------a~I~~IaV~PeyRGQGIGraLL 469 (511)
...++++++|++||.+-+....+. .++. +.-..+.++|......+...|+
T Consensus 44 p~hl~~~~~~~lvaa~P~YlK~hS-~GEyvFD~~Wa~a~~r~g~~YYPKlv~avPfTPv~G~R~l~~~~~~~~~~~~~L~ 122 (370)
T PF04339_consen 44 PRHLTLRDGGRLVAAAPLYLKSHS-YGEYVFDWAWADAYQRAGLRYYPKLVGAVPFTPVTGPRLLIAPGADRAALRAALL 122 (370)
T ss_pred ceEEEEEECCEEEEEeeeeeeccc-CcceehhHHHHHHHHHhccccCcceEeeeCCCCCcccceeECCCCCHHHHHHHHH
Confidence 456788889999999977654321 0000 1112577888888899999999
Q ss_pred HHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEe
Q psy3403 470 LKAIRAMVADDADEVVLETEITNRPALKLYENLGFVRD 507 (511)
Q Consensus 470 ~aLie~Are~G~~rI~L~V~~~N~~AikFYEKlGFe~v 507 (511)
+.+.+.+++.|+..+.+.-. +..-....+..||..-
T Consensus 123 ~~~~~~a~~~~~Ss~h~lF~--~~~~~~~l~~~G~~~r 158 (370)
T PF04339_consen 123 QALEQLAEENGLSSWHILFP--DEEDAAALEEAGFLSR 158 (370)
T ss_pred HHHHHHHHHcCCCcceeecC--CHHHHHHHHhCCCcee
Confidence 99999999998887665422 2344567788888753
No 216
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.
Probab=21.53 E-value=69 Score=20.84 Aligned_cols=30 Identities=30% Similarity=0.667 Sum_probs=19.7
Q ss_pred ccCCcccccccccccCCCccccccCCCCccc
Q psy3403 138 CLEPDECVNNSQLTNNSSSYSCKNCDNGHIL 168 (511)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (511)
|..+..|.++..-++....|.|. |..|...
T Consensus 2 C~~~~~C~~~~~C~~~~~~~~C~-C~~g~~g 31 (36)
T cd00053 2 CAASNPCSNGGTCVNTPGSYRCV-CPPGYTG 31 (36)
T ss_pred CCCCCCCCCCCEEecCCCCeEeE-CCCCCcc
Confidence 33345666666666666789995 8887643
No 217
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=21.08 E-value=5e+02 Score=28.06 Aligned_cols=55 Identities=16% Similarity=0.058 Sum_probs=39.6
Q ss_pred CeEEEEEEEEEeccccccceEEEEEEEEccCccCCcHHHHHHHHHHHHHHHCCCCEEEEE
Q psy3403 428 QKCVGAIVCKLDIHRKVIRRGYIAMLAVDENYRKRKIGSNLVLKAIRAMVADDADEVVLE 487 (511)
Q Consensus 428 GeLVG~a~l~~~~~~~~~~~a~I~~IaV~PeyRGQGIGraLL~aLie~Are~G~~rI~L~ 487 (511)
+.+++.+.+.... ..++...-+-+++||.-+-...|.-+++++|+++|+...-+.
T Consensus 302 ~~~la~~l~~~~g-----~~~~yly~gs~~~~~~~~~~~~l~~~~i~~a~~~G~~~ydf~ 356 (406)
T PF02388_consen 302 EIPLAGALFIYYG-----DEAYYLYGGSDEEYRKFYAPYLLQWEAIKYAKEKGIKRYDFG 356 (406)
T ss_dssp EEEEEEEEEEEET-----TEEEEEEEEE-CGCGGCTHHHHHHHHHHHHHHHTT-SEEEEE
T ss_pred cceEEEEEEEEEC-----CEEEEEECccchhhHhcCcchHHHHHHHHHHHHCCCCEEEee
Confidence 3455555554422 344444468899999999999999999999999999988775
No 218
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=20.48 E-value=1.4e+02 Score=30.11 Aligned_cols=45 Identities=20% Similarity=0.152 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEE---ecCCHHHHHHHHHCCCEEeeE
Q psy3403 465 GSNLVLKAIRAMVADDADEVVLET---EITNRPALKLYENLGFVRDKR 509 (511)
Q Consensus 465 GraLL~aLie~Are~G~~rI~L~V---~~~N~~AikFYEKlGFe~vG~ 509 (511)
...-..++++.++..|+++|.+.+ .+-|...++||+..||+....
T Consensus 104 ~tt~~~A~~~AL~alg~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~ 151 (239)
T TIGR02990 104 VVTPSSAAVDGLAALGVRRISLLTPYTPETSRPMAQYFAVRGFEIVNF 151 (239)
T ss_pred eeCHHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHHhCCcEEeee
Confidence 344566777778888999998874 556788999999999998753
Done!