BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3407
(749 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FIM|B Chain B, Crystal Structure Of Aryl-Alcohol-Oxidase From Pleurotus
Eryingii
Length = 566
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 112/231 (48%), Gaps = 20/231 (8%)
Query: 1 MLYQRGNDRDYNDWER-AGNPGWGFKHILPYFLKSE------DFQDISRQ-DAAFHNTGG 52
M+ RG+ D++ + G+ GW + +I + K+E D + S + A H T G
Sbjct: 93 MVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNG 152
Query: 53 YLTVS----PRLSPDETVKIIEAAGKELKIGTMYDINRDQYIGFGPFDTTTRYGLRCSTS 108
+++S P D + + +E D+ +G + G R S+S
Sbjct: 153 SVSISLPGFPTPLDDRVLATTQEQSEEFFFNP--DMGTGHPLGISWSIASVGNGQRSSSS 210
Query: 109 KAFLEPAKFRENLIILKNTEVIKIL---IDSKLKAYG-VEYINSQGK-ICHVNSTREVIL 163
A+L PA+ R NL +L N +V K++ + L A+ VEY +G V + +EV+L
Sbjct: 211 TAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVL 270
Query: 164 SAGAVGSPQLLMLSGIGIQKHLKEKNI-TVIKDLPVGENLQDHVCFPGVLF 213
SAG+VG+P LL LSGIG + L I T++ + VG NL DH+ P F
Sbjct: 271 SAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLLPAAFF 321
>pdb|2JBV|A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into
The Catalytic Mechanism
pdb|2JBV|B Chain B, Crystal Structure Of Choline Oxidase Reveals Insights Into
The Catalytic Mechanism
Length = 546
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 10 DYNDWE-RAGNPGWGFKHILPYFLKSEDFQDISRQDAAFHNTGG---YLTVSPRLSPDET 65
D ++WE + G GW + P + + E +D DA H G + V P+ D T
Sbjct: 111 DLDEWEAKYGATGWNAEAAWPLYKRLETNEDAG-PDAPHHGDSGPVHLMNVPPK---DPT 166
Query: 66 -VKIIEAAGKELKIGTMYDINRDQYIGFGPFDTTTRY-GLRCSTSKAFLEPAKFRENLII 123
V +++A + ++ G F R G R S+S +++ P +EN +
Sbjct: 167 GVALLDACEQAGIPRAKFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTL 226
Query: 124 LKNTEVIKILIDSKLKAYGVEYINSQ-GKICHVNSTREVILSAGAVGSPQLLMLSGIGIQ 182
L +++ D+ + GV+ ++S G + + EV+LS GA+ +P+LLMLSGIG
Sbjct: 227 LTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPA 286
Query: 183 KHLKEKNITVIKDLP-VGENLQDH 205
HL E I V+ D P VGE+LQDH
Sbjct: 287 AHLAEHGIEVLVDSPGVGEHLQDH 310
>pdb|3NNE|A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|B Chain B, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|C Chain C, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|D Chain D, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|E Chain E, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|F Chain F, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|G Chain G, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|H Chain H, Crystal Structure Of Choline Oxidase S101a Mutant
Length = 546
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 10 DYNDWE-RAGNPGWGFKHILPYFLKSEDFQDISRQDAAFHNTGG---YLTVSPRLSPDET 65
D ++WE + G GW + P + + E +D DA H G + V P+ D T
Sbjct: 111 DLDEWEAKYGATGWNAEAAWPLYKRLETNEDAG-PDAPHHGDSGPVHLMNVPPK---DPT 166
Query: 66 -VKIIEAAGKELKIGTMYDINRDQYIGFGPFDTTTRY-GLRCSTSKAFLEPAKFRENLII 123
V +++A + ++ G F R G R S+S +++ P +EN +
Sbjct: 167 GVALLDACEQAGIPRAKFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTL 226
Query: 124 LKNTEVIKILIDSKLKAYGVEYINSQ-GKICHVNSTREVILSAGAVGSPQLLMLSGIGIQ 182
L +++ D+ + GV+ ++S G + + EV+LS GA+ +P+LLMLSGIG
Sbjct: 227 LTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPA 286
Query: 183 KHLKEKNITVIKDLP-VGENLQDH 205
HL E I V+ D P VGE+LQDH
Sbjct: 287 AHLAEHGIEVLVDSPGVGEHLQDH 310
>pdb|3LJP|A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant
pdb|3LJP|B Chain B, Crystal Structure Of Choline Oxidase V464a Mutant
Length = 546
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 10 DYNDWE-RAGNPGWGFKHILPYFLKSEDFQDISRQDAAFHNTGG---YLTVSPRLSPDET 65
D ++WE + G GW + P + + E +D DA H G + V P+ D T
Sbjct: 111 DLDEWEAKYGATGWNAEAAWPLYKRLETNEDAG-PDAPHHGDSGPVHLMNVPPK---DPT 166
Query: 66 -VKIIEAAGKELKIGTMYDINRDQYIGFGPFDTTTRY-GLRCSTSKAFLEPAKFRENLII 123
V +++A + ++ G F R G R S+S +++ P +EN +
Sbjct: 167 GVALLDACEQAGIPRAKFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTL 226
Query: 124 LKNTEVIKILIDSKLKAYGVEYINSQ-GKICHVNSTREVILSAGAVGSPQLLMLSGIGIQ 182
L +++ D+ + GV+ ++S G + + EV+LS GA+ +P+LLMLSGIG
Sbjct: 227 LTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPA 286
Query: 183 KHLKEKNITVIKDLP-VGENLQDH 205
HL E I V+ D P VGE+LQDH
Sbjct: 287 AHLAEHGIEVLVDSPGVGEHLQDH 310
>pdb|3T37|A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium
Loti
Length = 526
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 14/223 (6%)
Query: 1 MLYQRGNDRDYNDW-ERAGNPGWGFKHILPYFLKSEDFQDISRQDAAFHNTGGYLTVSPR 59
M Y RG+ D+ W + +G+ WG+ +LP F ED +
Sbjct: 106 MGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGGDGIHGK-----GGPLPIH 160
Query: 60 LSPDETVKIIEA---AGKELKIGTMYDINRDQYIGFGPFDTTTRYGLRCSTSKAFLEPA- 115
L DE + A AG L + + N + IG P R G R + + A+L A
Sbjct: 161 LPADEVSPLARAFIEAGASLGLPRLEGHNSGEMIGVTPNSLNIRDGRRVTAADAWLTKAV 220
Query: 116 KFRENLIILKNTEVIKILIDSKLKAYGVEYINSQGKICHVNSTREVILSAGAVGSPQLLM 175
+ R+NL IL + V ++ ++ + +E + QG V + +++L AGA+ SP LLM
Sbjct: 221 RGRKNLTILTGSRVRRLKLEGN-QVRSLEVVGRQGS-AEVFAD-QIVLCAGALESPALLM 277
Query: 176 LSGIGIQKHLKEKNITVIKDLP-VGENLQDHVCFPGVLFSSNK 217
SGIG L + + D+P +G NLQDH+ G L+++ K
Sbjct: 278 RSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARK 320
>pdb|1CF3|A Chain A, Glucose Oxidase From Apergillus Niger
pdb|1GAL|A Chain A, Crystal Structure Of Glucose Oxidase From Aspergillus
Niger: Refined At 2.3 Angstroms Resolution
pdb|3QVP|A Chain A, Crystal Structure Of Glucose Oxidase For Space Group C2221
At 1.2 A Resolution
pdb|3QVR|A Chain A, Crystal Structure Of Glucose Oxidase For Space Group P3121
At 1.3 A Resolution
Length = 583
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 16/221 (7%)
Query: 3 YQRGNDRDYNDWERA-GNPGWGFKHILPYFLKSEDFQDISRQ--------DAAFHNTGGY 53
+ R + + WE GN GW + ++ Y L++E + + + +A+ H G
Sbjct: 111 WTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGT 170
Query: 54 LTVSPRLSPDETVKIIEA---AGKELKIGTMYDINRDQYIGFGPFDTTTRYG-LRCSTSK 109
+ PR + D+ I++A A ++ + T D G F T +R ++
Sbjct: 171 VHAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAR 230
Query: 110 AFLEPAKFRENLIILKNTEVIKILID---SKLKAYGVEYINSQGKICHVNSTREVILSAG 166
+L P R NL +L V K+L+ + +A GVE+ +G +V + EV+L+AG
Sbjct: 231 EWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAG 290
Query: 167 AVGSPQLLMLSGIGIQKHLKEKNITVIKDLPVGENLQDHVC 207
+ SP +L SGIG++ L+ I + DLPVG NLQD
Sbjct: 291 SAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGLNLQDQTT 331
>pdb|3Q9T|A Chain A, Crystal Structure Analysis Of Formate Oxidase
pdb|3Q9T|B Chain B, Crystal Structure Analysis Of Formate Oxidase
pdb|3Q9T|C Chain C, Crystal Structure Analysis Of Formate Oxidase
Length = 577
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 18/218 (8%)
Query: 6 GNDRDYNDWERAGNPGWGFKHILPYFLKSEDFQDISR---QDAAFHNTGGYLTVSPRLSP 62
G+ ++ WE G W + ++PY KS + D R + GG + +S
Sbjct: 104 GHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISHAELI 163
Query: 63 DETVKIIEAAGKELK------IGTMYDINRDQYIGFGPFDTTTRYGLRCSTSKAFLEPAK 116
DE E K K I +YD D G T G R S +FL K
Sbjct: 164 DEMAPFRENLTKAWKSMGQPLIENIYDGEMD---GLTHCCDTIYRGQR---SGSFLF-VK 216
Query: 117 FRENLIILKNTEVIKILI-DSKLKAYGVEYINSQGKICHVNSTREVILSAGAVGSPQLLM 175
+ N+ I+ +++I ++ GV + + G + + REVILS G +P+LLM
Sbjct: 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLM 276
Query: 176 LSGIGIQKHLKEKNI-TVIKDLPVGENLQDHVCFPGVL 212
LSGIG + L I T++ VG+NL DH P VL
Sbjct: 277 LSGIGPTRELSRHGINTIVDSRHVGQNLMDHPGVPFVL 314
>pdb|1GPE|A Chain A, Glucose Oxidase From Penicillium Amagasakiense
pdb|1GPE|B Chain B, Glucose Oxidase From Penicillium Amagasakiense
Length = 587
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 103 LRCSTSKAFLEPAKFRENLIILKNTEVIKILID---SKLKAYGVEYINSQGKICHVNSTR 159
+R ++A+L P R NL IL V K+L S +A GV + ++ V +
Sbjct: 228 VRVDAARAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKH 287
Query: 160 EVILSAGAVGSPQLLMLSGIGIQKHLKEKNITVIKDLPVGENLQDHVC 207
EV+L+AG+ SP +L SGIG++ L + N+T + DLPVG N+QD
Sbjct: 288 EVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGINMQDQTT 335
>pdb|3RED|A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|B Chain B, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|C Chain C, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|D Chain D, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|E Chain E, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|F Chain F, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|G Chain G, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|H Chain H, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|I Chain I, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|J Chain J, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|K Chain K, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|L Chain L, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
Length = 521
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 120 NLIILKNTEVIKILIDSK---LKAYGVEYINSQGKI--CHVNSTREVILSAGAVGSPQLL 174
NL + + V KI+ S + A GV Y +S G V EVI+SAG +GSPQLL
Sbjct: 208 NLRVAVHASVEKIIFSSNSSGVTAIGVIYKDSNGTPHQAFVRGEGEVIVSAGPIGSPQLL 267
Query: 175 MLSGIGIQKHLKEKNITVIKDLP-VGENLQDH 205
+LSG+G + +L NI V+ P VG+ L D+
Sbjct: 268 LLSGVGPESYLSSLNIPVVLSHPYVGQFLHDN 299
>pdb|3GDN|A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde
pdb|3GDN|B Chain B, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde
pdb|3GDP|A Chain A, Hydroxynitrile Lyase From Almond, Monoclinic Crystal Form
pdb|3GDP|B Chain B, Hydroxynitrile Lyase From Almond, Monoclinic Crystal Form
Length = 521
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 120 NLIILKNTEVIKILIDSK--LKAYGVEYINSQG--KICHVNSTREVILSAGAVGSPQLLM 175
NL + + V KI+ + L A GV Y +S G V S EVI+SAG +G+PQLL+
Sbjct: 208 NLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLL 267
Query: 176 LSGIGIQKHLKEKNITVIKDLP-VGENLQDH 205
LSG+G + +L NI V+ P VG+ L D+
Sbjct: 268 LSGVGPESYLSSLNIPVVLSHPYVGQFLHDN 298
>pdb|1JU2|A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond
pdb|1JU2|B Chain B, Crystal Structure Of The Hydroxynitrile Lyase From Almond
Length = 536
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 120 NLIILKNTEVIKILIDSK--LKAYGVEYINSQG--KICHVNSTREVILSAGAVGSPQLLM 175
NL + + V KI+ + L A GV Y +S G V S EVI+SAG +G+PQLL+
Sbjct: 208 NLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLL 267
Query: 176 LSGIGIQKHLKEKNITVIKDLP-VGENLQDH 205
LSG+G + +L NI V+ P VG+ L D+
Sbjct: 268 LSGVGPESYLSSLNIPVVLSHPYVGQFLHDN 298
>pdb|1NAA|A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex
With Cellobionolactam
pdb|1NAA|B Chain B, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex
With Cellobionolactam
Length = 541
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 86 RDQYIGFGPFDTTTRYGLRCSTSKAFLEPAKFRENLIILKNTEVIKILIDSKLKAYGVEY 145
+D G+ FD G R +L+ A R N N V ++ + + GV+
Sbjct: 173 KDHVFGYSAFDFLN--GKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS-QILGVQT 229
Query: 146 ----INSQGKICHVNSTREVILSAGAVGSPQLLMLSGIGIQKHLK--EKNITVIK----- 194
+ G I V VILSAGA G+ ++L SGIG ++ + N T
Sbjct: 230 NDPTLGPNGFIP-VTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQ 288
Query: 195 ----DLPVGENLQDH 205
+LPVG N QD+
Sbjct: 289 NQWINLPVGMNAQDN 303
>pdb|1KDG|A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose
Dehydrogenase
pdb|1KDG|B Chain B, Crystal Structure Of The Flavin Domain Of Cellobiose
Dehydrogenase
Length = 546
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 86 RDQYIGFGPFDTTTRYGLRCSTSKAFLEPAKFRENLIILKNTEVIKILIDSKLKAYGVEY 145
+D G+ FD G R +L+ A R N N V ++ + + GV+
Sbjct: 178 KDHVFGYSAFDFLN--GKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS-QILGVQT 234
Query: 146 ----INSQGKICHVNSTREVILSAGAVGSPQLLMLSGIGIQKHLK--EKNITVIK----- 194
+ G I V VILSAGA G+ ++L SGIG ++ + N T
Sbjct: 235 NDPTLGPNGFIP-VTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQ 293
Query: 195 ----DLPVGENLQDH 205
+LPVG N QD+
Sbjct: 294 NQWINLPVGMNAQDN 308
>pdb|3HW2|B Chain B, Crystal Structure Of The Sifa-skip(ph) Complex
Length = 105
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 13/99 (13%)
Query: 549 VFRSGNLMYKIND----KSAWTPGFVNLQNGILTVKEAPNSPKNISVI-------QCHSF 597
+ + G L YK K W FV L NGIL + P+ I ++ QC
Sbjct: 2 ITKEGMLHYKAGTSYLGKEHWKTCFVVLSNGILY--QYPDRTDVIPLLSVNMGGEQCGGC 59
Query: 598 SQVYDKSRPYTFKVNFNPYSFVLFAAPDESQLFDWLQDI 636
+ RP+ F+V + + +A E+++ +W+Q +
Sbjct: 60 RRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHL 98
>pdb|3CXB|B Chain B, Crystal Structure Of Sifa And Skip
Length = 112
Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 551 RSGNLMYKIND----KSAWTPGFVNLQNGILTVKEAPNSPKNISVI-------QCHSFSQ 599
+ G L YK K W FV L NGIL + P+ I ++ QC +
Sbjct: 2 KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILY--QYPDRTDVIPLLSVNMGGEQCGGCRR 59
Query: 600 VYDKSRPYTFKVNFNPYSFVLFAAPDESQLFDWLQDI 636
RP+ F+V + + +A E+++ +W+Q +
Sbjct: 60 ANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHL 96
>pdb|4I78|A Chain A, Crystal Structure Of A Subtype H17 Hemagglutinin Homologue
From A/little Yellow-shouldered Bat/guatemala/060/2010
(h17n10)
pdb|4I78|B Chain B, Crystal Structure Of A Subtype H17 Hemagglutinin Homologue
From A/little Yellow-shouldered Bat/guatemala/060/2010
(h17n10)
Length = 328
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 125 KNTEVIKILIDSKLKAYGVEYI---NSQGKICHVNSTREVILSAGAVGSPQLLMLSGIGI 181
+N + + L++ + G + I N GK+C +N + L + + +L
Sbjct: 15 QNNQTVNTLLEQNVPVTGAQEILETNHNGKLCSLNGVPPLDLQSCTLAG---WLLGNPNC 71
Query: 182 QKHLKEKNITVIKDLPVGENLQDHVCFPG 210
L+ + + IK + EN D +CFPG
Sbjct: 72 DNLLEAEEWSYIK---INENAPDDLCFPG 97
>pdb|3BQZ|B Chain B, Crystal Structure Of The Complex Of Malachite Green Bound
To Qacr(E90q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BQZ|A Chain A, Crystal Structure Of The Complex Of Malachite Green Bound
To Qacr(E90q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BR1|B Chain B, Crystal Structure Of The Complex Of Dequalinium Bound To
Qacr(E90q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BR1|D Chain D, Crystal Structure Of The Complex Of Dequalinium Bound To
Qacr(E90q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BR1|A Chain A, Crystal Structure Of The Complex Of Dequalinium Bound To
Qacr(E90q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BR1|E Chain E, Crystal Structure Of The Complex Of Dequalinium Bound To
Qacr(E90q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
Length = 194
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 26/138 (18%)
Query: 482 ISNVEIMCLKQHYTPSSVSAKQRHTLMRLLEHISSQTQYFNKCDEIILYSWSWIEQFSDI 541
I N+E ++ + + AK L +S TQY+ I IE +++
Sbjct: 53 ILNIEESKWQEQWKKEQIKAKTNREKFYLYNELSLTTQYYYPLQNAI------IEFYTEY 106
Query: 542 SRT----------------GHDQVFRSGNL--MYKINDKSAWTPGFVNLQNGILTVKEAP 583
+T + +F+ GNL + IND +A + N NGI+T
Sbjct: 107 YKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQ 166
Query: 584 NSPKNISVIQCHSFSQVY 601
N + I ++ + FSQ++
Sbjct: 167 NINERIKLM--NKFSQIF 182
>pdb|3BR3|B Chain B, Crystal Structure Of The Complex Of Ethidium Bound To
Qacr(e90q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BR3|A Chain A, Crystal Structure Of The Complex Of Ethidium Bound To
Qacr(e90q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3PM1|B Chain B, Structure Of Qacr E90q Bound To Ethidium
pdb|3PM1|A Chain A, Structure Of Qacr E90q Bound To Ethidium
Length = 194
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 26/138 (18%)
Query: 482 ISNVEIMCLKQHYTPSSVSAKQRHTLMRLLEHISSQTQYFNKCDEIILYSWSWIEQFSDI 541
I N+E ++ + + AK L +S TQY+ I IE +++
Sbjct: 53 ILNIEESKWQEQWKSEQIKAKTNREKFYLYNELSLTTQYYYPLQNAI------IEFYTEY 106
Query: 542 SRT----------------GHDQVFRSGNL--MYKINDKSAWTPGFVNLQNGILTVKEAP 583
+T + +F+ GNL + IND +A + N NGI+T
Sbjct: 107 YKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQ 166
Query: 584 NSPKNISVIQCHSFSQVY 601
N + I ++ + FSQ++
Sbjct: 167 NINERIKLM--NKFSQIF 182
>pdb|3BTI|B Chain B, Crystal Structure Of Qacr(E58q) Bound To Berberine
pdb|3BTI|D Chain D, Crystal Structure Of Qacr(E58q) Bound To Berberine
pdb|3BTI|A Chain A, Crystal Structure Of Qacr(E58q) Bound To Berberine
pdb|3BTI|E Chain E, Crystal Structure Of Qacr(E58q) Bound To Berberine
pdb|3BTJ|B Chain B, Crystal Structure Of Qacr(E58q) Bound To Dequalinium
pdb|3BTJ|D Chain D, Crystal Structure Of Qacr(E58q) Bound To Dequalinium
pdb|3BTJ|A Chain A, Crystal Structure Of Qacr(E58q) Bound To Dequalinium
pdb|3BTJ|E Chain E, Crystal Structure Of Qacr(E58q) Bound To Dequalinium
pdb|3BTL|B Chain B, Crystal Structure Of Qacr(E58q) Bound To Malachite Green
pdb|3BTL|D Chain D, Crystal Structure Of Qacr(E58q) Bound To Malachite Green
pdb|3BTL|A Chain A, Crystal Structure Of Qacr(E58q) Bound To Malachite Green
pdb|3BTL|E Chain E, Crystal Structure Of Qacr(E58q) Bound To Malachite Green
Length = 188
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 26/138 (18%)
Query: 482 ISNVEIMCLKQHYTPSSVSAKQRHTLMRLLEHISSQTQYFNKCDEIILYSWSWIEQFSDI 541
I N+E ++ + + AK L +S T+Y+ I IE +++
Sbjct: 53 ILNIEQSKWQEQWKKEQIKAKTNREKFYLYNELSLTTEYYYPLQNAI------IEFYTEY 106
Query: 542 SRT----------------GHDQVFRSGNL--MYKINDKSAWTPGFVNLQNGILTVKEAP 583
+T + +F+ GNL + IND +A + N NGI+T
Sbjct: 107 YKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQ 166
Query: 584 NSPKNISVIQCHSFSQVY 601
N + I ++ + FSQ++
Sbjct: 167 NINERIKLM--NKFSQIF 182
>pdb|1JTX|B Chain B, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Crystal Violet
pdb|1JTX|D Chain D, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Crystal Violet
pdb|1JTX|A Chain A, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Crystal Violet
pdb|1JTX|E Chain E, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Crystal Violet
pdb|1JUP|B Chain B, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Malachite Green
pdb|1JUP|D Chain D, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Malachite Green
pdb|1JUP|A Chain A, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Malachite Green
pdb|1JUP|E Chain E, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Malachite Green
pdb|1JUM|B Chain B, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To The Natural Drug Berberine
pdb|1JUM|D Chain D, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To The Natural Drug Berberine
pdb|1JUM|A Chain A, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To The Natural Drug Berberine
pdb|1JUM|E Chain E, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To The Natural Drug Berberine
pdb|1JTY|B Chain B, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Ethidium
pdb|1JTY|D Chain D, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Ethidium
pdb|1JTY|A Chain A, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Ethidium
pdb|1JTY|E Chain E, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Ethidium
pdb|1JT0|A Chain A, Crystal Structure Of A Cooperative Qacr-dna Complex
pdb|1JT0|B Chain B, Crystal Structure Of A Cooperative Qacr-dna Complex
pdb|1JT0|C Chain C, Crystal Structure Of A Cooperative Qacr-dna Complex
pdb|1JT0|D Chain D, Crystal Structure Of A Cooperative Qacr-dna Complex
pdb|1RKW|A Chain A, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Pentamadine
pdb|1RKW|B Chain B, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Pentamadine
pdb|1RKW|D Chain D, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Pentamadine
pdb|1RKW|E Chain E, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Pentamadine
pdb|2DTZ|B Chain B, Crystal Structure Of Multidrug Binding Protein Qacr From
Staphylococcus Aureus Cocrystallized With Compound Db75
pdb|2DTZ|D Chain D, Crystal Structure Of Multidrug Binding Protein Qacr From
Staphylococcus Aureus Cocrystallized With Compound Db75
pdb|2DTZ|A Chain A, Crystal Structure Of Multidrug Binding Protein Qacr From
Staphylococcus Aureus Cocrystallized With Compound Db75
pdb|2DTZ|E Chain E, Crystal Structure Of Multidrug Binding Protein Qacr From
Staphylococcus Aureus Cocrystallized With Compound Db75
pdb|2HQ5|B Chain B, Crystal Structure Of Multidrug Binding Protein Qacr From
Staphylococcus Aureus Cocrystallized With Compound Db359
pdb|2HQ5|D Chain D, Crystal Structure Of Multidrug Binding Protein Qacr From
Staphylococcus Aureus Cocrystallized With Compound Db359
pdb|2HQ5|A Chain A, Crystal Structure Of Multidrug Binding Protein Qacr From
Staphylococcus Aureus Cocrystallized With Compound Db359
pdb|2HQ5|E Chain E, Crystal Structure Of Multidrug Binding Protein Qacr From
Staphylococcus Aureus Cocrystallized With Compound Db359
pdb|2GBY|B Chain B, Structure Of Qacr Multidrug Transcriptional Regulator
Bound To Bivalent Diamidine Berenil
pdb|2GBY|D Chain D, Structure Of Qacr Multidrug Transcriptional Regulator
Bound To Bivalent Diamidine Berenil
pdb|2GBY|A Chain A, Structure Of Qacr Multidrug Transcriptional Regulator
Bound To Bivalent Diamidine Berenil
pdb|2GBY|E Chain E, Structure Of Qacr Multidrug Transcriptional Regulator
Bound To Bivalent Diamidine Berenil
Length = 194
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 26/138 (18%)
Query: 482 ISNVEIMCLKQHYTPSSVSAKQRHTLMRLLEHISSQTQYFNKCDEIILYSWSWIEQFSDI 541
I N+E ++ + + AK L +S T+Y+ I IE +++
Sbjct: 53 ILNIEESKWQEQWKKEQIKAKTNREKFYLYNELSLTTEYYYPLQNAI------IEFYTEY 106
Query: 542 SRT----------------GHDQVFRSGNL--MYKINDKSAWTPGFVNLQNGILTVKEAP 583
+T + +F+ GNL + IND +A + N NGI+T
Sbjct: 107 YKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQ 166
Query: 584 NSPKNISVIQCHSFSQVY 601
N + I ++ + FSQ++
Sbjct: 167 NINERIKLM--NKFSQIF 182
>pdb|1JT6|B Chain B, Crystal Structure Of The Multidrug Binding Protein Qacr
Bound To Dequalinium
pdb|1JT6|D Chain D, Crystal Structure Of The Multidrug Binding Protein Qacr
Bound To Dequalinium
pdb|1JT6|A Chain A, Crystal Structure Of The Multidrug Binding Protein Qacr
Bound To Dequalinium
pdb|1JT6|E Chain E, Crystal Structure Of The Multidrug Binding Protein Qacr
Bound To Dequalinium
pdb|1RPW|A Chain A, Crystal Structure Of The Multidrug Binding Protein Qacr
Bound To The Diamidine Hexamidine
pdb|1RPW|B Chain B, Crystal Structure Of The Multidrug Binding Protein Qacr
Bound To The Diamidine Hexamidine
pdb|1RPW|C Chain C, Crystal Structure Of The Multidrug Binding Protein Qacr
Bound To The Diamidine Hexamidine
pdb|1RPW|D Chain D, Crystal Structure Of The Multidrug Binding Protein Qacr
Bound To The Diamidine Hexamidine
pdb|2G0E|A Chain A, Structure Of Qacr Multidrug Transcriptional Regulator
Bound To Trivalent And Bivalent Diamidine Drugs
pdb|2G0E|B Chain B, Structure Of Qacr Multidrug Transcriptional Regulator
Bound To Trivalent And Bivalent Diamidine Drugs
pdb|2G0E|D Chain D, Structure Of Qacr Multidrug Transcriptional Regulator
Bound To Trivalent And Bivalent Diamidine Drugs
pdb|2G0E|E Chain E, Structure Of Qacr Multidrug Transcriptional Regulator
Bound To Trivalent And Bivalent Diamidine Drugs
Length = 188
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 26/138 (18%)
Query: 482 ISNVEIMCLKQHYTPSSVSAKQRHTLMRLLEHISSQTQYFNKCDEIILYSWSWIEQFSDI 541
I N+E ++ + + AK L +S T+Y+ I IE +++
Sbjct: 53 ILNIEESKWQEQWKKEQIKAKTNREKFYLYNELSLTTEYYYPLQNAI------IEFYTEY 106
Query: 542 SRT----------------GHDQVFRSGNL--MYKINDKSAWTPGFVNLQNGILTVKEAP 583
+T + +F+ GNL + IND +A + N NGI+T
Sbjct: 107 YKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQ 166
Query: 584 NSPKNISVIQCHSFSQVY 601
N + I ++ + FSQ++
Sbjct: 167 NINERIKLM--NKFSQIF 182
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 15/83 (18%)
Query: 176 LSGIGIQKHLKEKNITVIKDL-----PVGENLQDHVCFP-------GVLFSSNKDPAITL 223
L + I KH K NI IKD+ P GE +V ++ SS +TL
Sbjct: 101 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP---LTL 157
Query: 224 HYLRYLKVAALKGISTVEVAKVV 246
++RY L+G+ + A+V+
Sbjct: 158 EHVRYFLYQLLRGLKYMHSAQVI 180
>pdb|3BR2|B Chain B, Crystal Structure Of The Complex Of Dequalinium Bound To
Qacr(E120q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BR2|D Chain D, Crystal Structure Of The Complex Of Dequalinium Bound To
Qacr(E120q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BR2|A Chain A, Crystal Structure Of The Complex Of Dequalinium Bound To
Qacr(E120q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BR2|E Chain E, Crystal Structure Of The Complex Of Dequalinium Bound To
Qacr(E120q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
Length = 194
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 26/138 (18%)
Query: 482 ISNVEIMCLKQHYTPSSVSAKQRHTLMRLLEHISSQTQYFNKCDEIILYSWSWIEQFSDI 541
I N+E ++ + + AK L +S T+Y+ I IE +++
Sbjct: 53 ILNIEESKWQEQWKKEQIKAKTNREKFYLYNELSLTTEYYYPLQNAI------IEFYTEY 106
Query: 542 SRT----------------GHDQVFRSGNL--MYKINDKSAWTPGFVNLQNGILTVKEAP 583
+T + +F+ GNL + IND +A + N NGI+T
Sbjct: 107 YKTNSINEKMNKLQNKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQ 166
Query: 584 NSPKNISVIQCHSFSQVY 601
N + I ++ + FSQ++
Sbjct: 167 NINERIKLM--NKFSQIF 182
>pdb|1SDO|A Chain A, Crystal Structure Of Restriction Endonuclease Bstyi
pdb|1VRR|A Chain A, Crystal Structure Of The Restriction Endonuclease Bstyi
Complex With Dna
pdb|1VRR|B Chain B, Crystal Structure Of The Restriction Endonuclease Bstyi
Complex With Dna
pdb|2P0J|A Chain A, Structure Of Restriction Endonuclease Bstyi Bound To
Non-Cognate Dna
pdb|2P0J|B Chain B, Structure Of Restriction Endonuclease Bstyi Bound To
Non-Cognate Dna
Length = 203
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 11/58 (18%)
Query: 49 NTGGYLTVSPRL-------SPDETVKIIEAAGKE-LKIGTMYDINRDQY---IGFGPF 95
T Y+T P+L P+E K+IEAAGKE LK D +D+ + FG +
Sbjct: 77 RTNYYVTADPKLIRETLSLEPEEQKKVIEAAGKEALKSYNQTDFVKDRVAIEVQFGKY 134
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 15/83 (18%)
Query: 176 LSGIGIQKHLKEKNITVIKDL-----PVGENLQDHVCFP-------GVLFSSNKDPAITL 223
L + I KH K NI IKD+ P GE +V ++ SS +TL
Sbjct: 102 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP---LTL 158
Query: 224 HYLRYLKVAALKGISTVEVAKVV 246
++RY L+G+ + A+V+
Sbjct: 159 EHVRYFLYQLLRGLKYMHSAQVI 181
>pdb|3BR0|B Chain B, Crystal Structure Of The Complex Of Malachite Green Bound
To Qacr(E120q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BR0|A Chain A, Crystal Structure Of The Complex Of Malachite Green Bound
To Qacr(E120q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BR6|B Chain B, Crystal Structure Of The Complex Of Rhodamine 6g Bound To
Qacr(E120q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BR6|D Chain D, Crystal Structure Of The Complex Of Rhodamine 6g Bound To
Qacr(E120q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BR6|A Chain A, Crystal Structure Of The Complex Of Rhodamine 6g Bound To
Qacr(E120q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
pdb|3BR6|E Chain E, Crystal Structure Of The Complex Of Rhodamine 6g Bound To
Qacr(E120q), A Mutant Of A Multidrug Binding
Transcriptional Repressor
Length = 194
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 26/138 (18%)
Query: 482 ISNVEIMCLKQHYTPSSVSAKQRHTLMRLLEHISSQTQYFNKCDEIILYSWSWIEQFSDI 541
I N+E ++ + + AK L +S T+Y+ I IE +++
Sbjct: 53 ILNIEESKWQEQWKSEQIKAKTNREKFYLYNELSLTTEYYYPLQNAI------IEFYTEY 106
Query: 542 SRT----------------GHDQVFRSGNL--MYKINDKSAWTPGFVNLQNGILTVKEAP 583
+T + +F+ GNL + IND +A + N NGI+T
Sbjct: 107 YKTNSINEKMNKLQNKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQ 166
Query: 584 NSPKNISVIQCHSFSQVY 601
N + I ++ + FSQ++
Sbjct: 167 NINERIKLM--NKFSQIF 182
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,399,957
Number of Sequences: 62578
Number of extensions: 886588
Number of successful extensions: 2189
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2163
Number of HSP's gapped (non-prelim): 43
length of query: 749
length of database: 14,973,337
effective HSP length: 106
effective length of query: 643
effective length of database: 8,340,069
effective search space: 5362664367
effective search space used: 5362664367
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)