RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3407
(749 letters)
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 130 bits (326), Expect = 4e-33
Identities = 47/223 (21%), Positives = 87/223 (39%), Gaps = 17/223 (7%)
Query: 1 MLYQRGNDRDYNDWERAGNPGWGFKHILPYFLKSEDFQDIS--------RQDAAFHNTGG 52
+ + + + G GW + ++ Y K+E + + +A H T G
Sbjct: 114 SWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNG 173
Query: 53 YLTVSPRLSPDETVKIIEAAGKELKIG----TMYDINRDQYIGFGPFDTTTRYGLRCSTS 108
+ R + I++A + + + +R +
Sbjct: 174 TVQSGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAA 233
Query: 109 KAFLEPAKFRENLIILKNTEVIKILIDSK---LKAYGVEYINSQGKICHVNSTREVILSA 165
+A+L P R NL IL V K+L +A GV + ++ V + EV+L+A
Sbjct: 234 RAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAA 293
Query: 166 GAVGSPQLLMLSGIGIQKHLKEKNITVIKDLP--VGENLQDHV 206
G+ SP +L SGIG++ L + N+T + DLP + + +
Sbjct: 294 GSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGICSMMSREL 336
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 122 bits (307), Expect = 9e-31
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 10 DYNDWERAGNPGWGFKHILPYFLKSEDFQDIS--------RQDAAFHNTGGYLTVSPRLS 61
+ GN GW + ++ Y L++E + + +A+ H G + PR +
Sbjct: 117 VDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDT 176
Query: 62 PDETVKIIEA---AGKELKIGTMYDINRDQYIGFGPFDTTTRYGLRCS-TSKAFLEPAKF 117
D+ I++A A ++ + T D G F T S ++ +L P
Sbjct: 177 GDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQ 236
Query: 118 RENLIILKNTEVIKILIDSK---LKAYGVEYINSQGKICHVNSTREVILSAGAVGSPQLL 174
R NL +L V K+L+ +A GVE+ +G +V + EV+L+AG+ SP +L
Sbjct: 237 RPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTIL 296
Query: 175 MLSGIGIQKHLKEKNITVIKDLPVG--ENLQDHV 206
SGIG++ L+ I + DLPVG + +
Sbjct: 297 EYSGIGMKSILEPLGIDTVVDLPVGLCSMMPKEM 330
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 106 bits (265), Expect = 1e-25
Identities = 52/262 (19%), Positives = 87/262 (33%), Gaps = 30/262 (11%)
Query: 1 MLYQRGNDRDYNDWERAGNPGWGFKHILPYFLKSEDFQDISRQDAAFHNTGGYLTVSPRL 60
+Y R N Y+ W + + ED ++ + +
Sbjct: 112 GVYARANTSIYSAS----GVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFL---- 163
Query: 61 SPDETVKIIEAAGKELKIGTMYDINRDQYIGFGPFDTTTRYGLRCSTSKAFLEPAKFREN 120
E + + + D G +T + L
Sbjct: 164 --------------EAGVHPNHGFSLDHEEGTRITGSTFDNKGTRHAADELLNKGNSNNL 209
Query: 121 LIILK-NTEVIKILIDSKLKAYGVEYINSQG--KICHVNSTREVILSAGAVGSPQLLMLS 177
+ + + E I L A GV Y +S G V S EVI+SAG +G+PQLL+LS
Sbjct: 210 RVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLS 269
Query: 178 GIGIQKHLKEKNITVIKDLP-VGENLQDHVCFPGVLFSSNKDPAITLHYL-RYLKVAALK 235
G+G + +L NI V+ P VG+ L V + + Y + +
Sbjct: 270 GVGPESYLSSLNIPVVLSHPYVGQCLVGKVLDGDFRVTGINALRVVDGSTFPYTPASHPQ 329
Query: 236 GISTVEVAKVVG--FINTKRNS 255
G + + + VG + + S
Sbjct: 330 GFYLM-LGRYVGIKILQERSAS 350
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 88.8 bits (219), Expect = 1e-19
Identities = 31/231 (13%), Positives = 61/231 (26%), Gaps = 30/231 (12%)
Query: 1 MLYQRGNDRDYNDWERAGNPGWGFKHILPYFLKSEDFQDISRQDAAFHNTGGYLTVSPRL 60
+ + + + + + YF ++ ++ D A+ + + +
Sbjct: 117 GMAVTPKRNYFEEILPSVDSNEMYNK---YFPRANTGLGVNNIDQAWFESTEWYKFARTG 173
Query: 61 SPDETVKIIEA----AGKELKIGTMYDINRDQYIGFGPFDTTTRYGLRCSTSKAFLEPAK 116
+ + + G G + S K +L A
Sbjct: 174 RKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAGKKSLDKTYLAQAA 233
Query: 117 FRENLIILKNTEVIKILIDSKLKAYGVEYI----NSQGKICHVNSTREVILSAGAVGSPQ 172
L I V K+ + Y V V + V +AG+VG+ +
Sbjct: 234 ATGKLTITTLHRVTKVAPATG-SGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSK 292
Query: 173 LLMLSGIGIQKHLKEKNITVIKDLP-----VGENLQDHVCFPGVLFSSNKD 218
LL+ K + LP VGE + F +
Sbjct: 293 LLVSM--------KAQGH-----LPNLSSQVGEGWGVLLNKATDNFGRLPE 330
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 88.1 bits (217), Expect = 3e-19
Identities = 23/217 (10%), Positives = 52/217 (23%), Gaps = 27/217 (12%)
Query: 1 MLYQRGNDRDYNDWERA----------GNPGWGFKHILPYFLKSEDFQDISRQDAAFHNT 50
+ R D R G + P F + E + + D
Sbjct: 93 TFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTHWTCATPRFDR-EQRPLLVKDD--ADAD 149
Query: 51 GGYLTVS-PRLSP--DETVKIIEAAGKELKIGTMYDINRDQYIGFGPF----DTTTRYGL 103
+ + + + + F + +
Sbjct: 150 DAEWDRLYTKAESYFQTGTDQFKESIRHNLVLNKLAEEYKGQRDFQQIPLAATRRSPTFV 209
Query: 104 RCSTSKAFLEPAKF------RENLIILKNTEVIKILIDSK-LKAYGVEYINSQGKICHVN 156
S++ + E + +++ ++ + + +
Sbjct: 210 EWSSANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEI 269
Query: 157 STREVILSAGAVGSPQLLMLSGIGIQKHLKEKNITVI 193
+L+AGAV + QLL+ SG G N +
Sbjct: 270 KADVYVLTAGAVHNTQLLVNSGFGQLGRPNPTNPPEL 306
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 86.2 bits (212), Expect = 1e-18
Identities = 27/217 (12%), Positives = 58/217 (26%), Gaps = 22/217 (10%)
Query: 1 MLYQRGNDRDYNDWERAGNPGWGFKHILPYFLKSEDFQDISRQDAAFHNTGGYLTVSPRL 60
+ + + + YF ++ ++ D + + +
Sbjct: 113 GMAVEPKRSYFEEIL---PRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDTEWYKFARVS 169
Query: 61 SP----DETVKIIEAAGKELKIGTMYDINRDQYIGFGPFDTTTRYGLRCSTSKAFLEPAK 116
+ + + S K +L A
Sbjct: 170 REQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAAAL 229
Query: 117 FRENLIILKNTEVIKILIDS-KLKAYGVEYINSQGKIC--HVNSTREVILSAGAVGSPQL 173
+ I +V I A VE ++ GK+ S R + L AG++GS +L
Sbjct: 230 GTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTEL 289
Query: 174 LMLSGIGIQKHLKEKNITVIKDLP--VGENLQDHVCF 208
L+ + ++ + +L VG +
Sbjct: 290 LVRA----------RDTGTLPNLNSEVGAGWGCVLGK 316
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 83.2 bits (204), Expect = 1e-17
Identities = 40/231 (17%), Positives = 74/231 (32%), Gaps = 14/231 (6%)
Query: 3 YQRGNDRDYNDWERAGNPGWGFKHILPYFLKSEDFQDISRQDAAFHNTGGYLTVSPRLSP 62
+ D+ + + + PY K + +T G + +
Sbjct: 96 GALYWYPNDGDFSSSVGWPSSWTNHAPYTSKLSSRLPSTD----HPSTDGQRYLEQSFNV 151
Query: 63 DETVKIIEAAGKELKIGTMYDINRDQYIGFGPFDTTTRYGLRCSTSKAFLEPAKFRENLI 122
+ + + T+ D + FG G R +L+ A R N
Sbjct: 152 VSQLLKGQGYNQA----TINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFT 207
Query: 123 ILKNTEVIKILIDSKLKAYGVEYINSQG---KICHVNSTREVILSAGAVGSPQLLMLSGI 179
N V ++ + + GV+ + V VILSAGA G+ ++L SGI
Sbjct: 208 FKTNVMVSNVVRNGS-QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGI 266
Query: 180 GIQKHLK--EKNITVIKDLPVGENLQDHVCFPGVLFSSNKDPAITLHYLRY 228
G ++ + N T LP + + SS + + + +
Sbjct: 267 GPTDMIQTVQSNPTAAAALPPQNQWINLPVGMTTIGSSPQSAVVDSNVKVF 317
>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 209
Score = 45.7 bits (107), Expect = 6e-06
Identities = 21/139 (15%), Positives = 43/139 (30%), Gaps = 14/139 (10%)
Query: 513 HISSQTQYFNKCDEIILYSWSWIEQFSDISRTGHDQVFRSGNLMYKINDKSA----WTPG 568
IS ++ ++K D+ S QF I+ V ++G L + D S W
Sbjct: 72 TISLASERYDKDDDG----PSDGNQFPPIAAQDLPFVIKAGYLEKRRKDHSFLGFEWQKR 127
Query: 569 FVNLQNGILTVKEAPNSPKNISVIQCHSFSQVY------DKSRPYTFKVNFNPYSFVLFA 622
+ L + + + + D + F++ F
Sbjct: 128 WCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFT 187
Query: 623 APDESQLFDWLQDIMISIK 641
A +W+Q + ++
Sbjct: 188 AASPKDAEEWVQQLKFILQ 206
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId:
9606]}
Length = 113
Score = 43.0 bits (100), Expect = 1e-05
Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 4/100 (4%)
Query: 548 QVFRSGNLMYKINDKSAWTPGFVNLQNGILTVKEAPNSPKNISVIQCHSFSQVYD----K 603
+ R G L+ K + + W P +V L + + + +I +
Sbjct: 4 KRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFG 63
Query: 604 SRPYTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIKIN 643
R + FK+ F A + W++DI +IK
Sbjct: 64 KRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCI 103
>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein
APS {Mouse (Mus musculus) [TaxId: 10090]}
Length = 136
Score = 37.1 bits (85), Expect = 0.001
Identities = 16/115 (13%), Positives = 33/115 (28%), Gaps = 20/115 (17%)
Query: 551 RSGNLMYKINDKSA--------WTPGFVNLQNGILTV------------KEAPNSPKNIS 590
R G L + + D +A W + L+ + S +
Sbjct: 20 REGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSA 79
Query: 591 VIQCHSFSQVYDKSRPYTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIKINDD 645
+I+ + + + TF + + + D Q W+ DI +
Sbjct: 80 IIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDSGPS 134
>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9
{Human (Homo sapiens) [TaxId: 9606]}
Length = 150
Score = 37.4 bits (85), Expect = 0.002
Identities = 16/119 (13%), Positives = 40/119 (33%), Gaps = 14/119 (11%)
Query: 544 TGHDQVFRSGNLMYKINDKSA------WTPGFVNLQNGILT--------VKEAPNSPKNI 589
+ + + G L + + + F +L ++ PK
Sbjct: 13 SQKGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGS 72
Query: 590 SVIQCHSFSQVYDKSRPYTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIKINDDKKI 648
+ +K R + F++ S L AA E ++ +W+ + +++N + +
Sbjct: 73 IFLDSCMGVVQNNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAM 131
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding
protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 36.4 bits (83), Expect = 0.002
Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 6/107 (5%)
Query: 541 ISRTGHDQVFRSGNLMYK-INDKSAWTPGFVNLQNGILTVKEAPNSPKNISVIQCHSFSQ 599
+ R + V G L + + W + L L + + + S++
Sbjct: 1 LRRDPNLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNI 60
Query: 600 VYDKS-----RPYTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIK 641
D R +TF + AA L WL+ + + +
Sbjct: 61 RPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASR 107
>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 35.3 bits (80), Expect = 0.004
Identities = 12/103 (11%), Positives = 29/103 (28%), Gaps = 10/103 (9%)
Query: 549 VFRSGNLMYKINDKSAWTPGFVNLQNGILTV----KEAPNSPKNI------SVIQCHSFS 598
+ + G L+ + + + W L+ + P V S S
Sbjct: 2 IIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNS 61
Query: 599 QVYDKSRPYTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIK 641
F++ A + +W++ I ++ +
Sbjct: 62 NGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASR 104
>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 127
Score = 36.0 bits (82), Expect = 0.004
Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 13/127 (10%)
Query: 551 RSGNLMYKINDKSAWTPGFVNLQNGILTVKEAPNSPKNISVIQCHSFS--QVYDKSRPYT 608
R G L+ W + L + L E + +I + S +V D +P
Sbjct: 7 REGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVLDPRKPNC 66
Query: 609 FKVNFNPYSFVLFAAPDESQLFDWLQDIMISIKINDDKKILVGKFAAPDESQLFDWLQDI 668
F++ + + A + + + +AP + +W++ I
Sbjct: 67 FELYNPSHKGQVIKACKTEADG---------RVVEGNHVVYR--ISAPSPEEKEEWMKSI 115
Query: 669 MISIKIN 675
SI +
Sbjct: 116 KASISRD 122
>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein
6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 109
Score = 35.4 bits (80), Expect = 0.005
Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 3/100 (3%)
Query: 544 TGHDQVFRSGNLMYKINDKSAWTPGFVNLQNGILTVKEAPNS---PKNISVIQCHSFSQV 600
+G SG L K W + ++N +L A ++ ++
Sbjct: 3 SGSSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVK 62
Query: 601 YDKSRPYTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISI 640
+ S F++ F +F A D W+
Sbjct: 63 DENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGT 102
>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8
(ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 35.7 bits (81), Expect = 0.005
Identities = 18/132 (13%), Positives = 44/132 (33%), Gaps = 8/132 (6%)
Query: 544 TGHDQVFRSGNLMYKINDKSAWTPGFVNLQNGILTVKEAPNSPKNISVIQCHSFSQVYDK 603
+G + + L +WT + L+ G+L + + + + + + ++ +
Sbjct: 3 SGSSGIVMADWL-KIRGTLKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEIIERP 61
Query: 604 SRPYTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIKINDDKKILVGKFAAPDESQLFD 663
S+ + + F LF ++S I A ES
Sbjct: 62 SKK-------DGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRC 114
Query: 664 WLQDIMISIKIN 675
W+ + +++K
Sbjct: 115 WMDALELALKSG 126
>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 35.3 bits (80), Expect = 0.006
Identities = 10/105 (9%), Positives = 35/105 (33%), Gaps = 12/105 (11%)
Query: 544 TGHDQVFRSGNLMYKINDKSAWTPGFVNLQNGILTVKEAPNSPKNISVIQCHSFSQVY-- 601
+G + G L + + W + L+ L + K + +
Sbjct: 3 SGSSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIA 62
Query: 602 ---DKSRPYTFKVNFNPYSFV-------LFAAPDESQLFDWLQDI 636
+++ + F++ + + A ++++ +W++ +
Sbjct: 63 TNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFL 107
>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 111
Score = 33.8 bits (76), Expect = 0.018
Identities = 13/111 (11%), Positives = 30/111 (27%), Gaps = 10/111 (9%)
Query: 541 ISRTGHDQVFRSGNLMYKINDKSA----WTPGFVNLQNGILTVKEAPNSPKNISVIQCHS 596
I V ++G L + D S W + L + + +
Sbjct: 1 IPAQDLPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDG 60
Query: 597 FSQVYD------KSRPYTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIK 641
+ + + F++ F A +W+Q + ++
Sbjct: 61 YDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQ 111
>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 33.2 bits (75), Expect = 0.019
Identities = 11/99 (11%), Positives = 31/99 (31%), Gaps = 7/99 (7%)
Query: 549 VFRSGNLMYKINDKSAWTPGFVNLQNGILT---VKEAPNSPKNISVIQCHSFSQVYDKSR 605
V ++G + + W + L + + + I + + H +
Sbjct: 3 VIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDI 62
Query: 606 P---YTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIK 641
F++ +F A ++ W++ + +I
Sbjct: 63 MMRDNLFEIVTTSRTFY-VQADSPEEMHSWIKAVSGAIV 100
>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and
3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 33.2 bits (75), Expect = 0.022
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 4/94 (4%)
Query: 551 RSGNLMYKINDKSAWTPGFVNLQNGILTVKEAPNSPKNISVIQCHSFSQVY---DKSRPY 607
+ G L + W + L L + SP+ I ++ S V + R
Sbjct: 6 KEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVN 65
Query: 608 TFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIK 641
F + F +F A + +W++ + +
Sbjct: 66 CFCLVFPFRTFY-LCAKTGVEADEWIKILRWKLS 98
>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha,
APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 31.1 bits (69), Expect = 0.12
Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 5/91 (5%)
Query: 551 RSGNLMYKIND---KSAWTPGFVNLQNGILTVKEAPNSP--KNISVIQCHSFSQVYDKSR 605
++G L + S W F Q G L + + + + C + + R
Sbjct: 7 KAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARGDVAGGLAMDIDNCSVMAVDCEDRR 66
Query: 606 PYTFKVNFNPYSFVLFAAPDESQLFDWLQDI 636
+F+ + A + +W+ I
Sbjct: 67 YCFQITSFDGKKSSILQAESKKDHEEWICTI 97
>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 31.0 bits (69), Expect = 0.14
Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 3/92 (3%)
Query: 551 RSGNLMYK-INDKSAWTPGFVNLQNGILTVKEAPNSPKNISVIQCHSFSQVYDKSRPYTF 609
+SG L K + +V ++ + +I + S F
Sbjct: 3 KSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAIS-TVRVQGDNKF 61
Query: 610 KVNFNPYSFVLFAAPDESQLFDWLQDIMISIK 641
+V +FV F E + DW+ ++ ++K
Sbjct: 62 EVVTTQRTFV-FRVEKEEERNDWISILLNALK 92
>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain
[TaxId: 10090]}
Length = 106
Score = 30.4 bits (67), Expect = 0.22
Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 9/91 (9%)
Query: 558 KINDKSAWTPGFVNLQNGILTVKEAPNSPKN---------ISVIQCHSFSQVYDKSRPYT 608
K +W + + N + + S + +S+ + + K + +
Sbjct: 16 KKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHV 75
Query: 609 FKVNFNPYSFVLFAAPDESQLFDWLQDIMIS 639
FK+ + + LF A D+ ++ W+Q I +
Sbjct: 76 FKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 169
Score = 31.0 bits (69), Expect = 0.26
Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 595 HSFSQVYDKSRPYTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIKINDDK 646
+ PY F+V ++ +F +P E W+ + I+ N D
Sbjct: 87 EMEQISIIERFPYPFQVVYDEGPLYVF-SPTEELRKRWIHQLKNVIRYNSDL 137
>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1,
STAP-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 136
Score = 30.7 bits (68), Expect = 0.30
Identities = 10/98 (10%), Positives = 28/98 (28%), Gaps = 3/98 (3%)
Query: 549 VFRSGNLMYKINDKSAWTPGFVNLQNGILTVKEAPNSPKNISVIQ---CHSFSQVYDKSR 605
++ G L+ K + + + L+ L S + + ++ +
Sbjct: 11 LYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNSTEK 70
Query: 606 PYTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIKIN 643
P V + +W I+ +++
Sbjct: 71 NCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTELS 108
>d2ejna1 a.101.1.1 (A:1-72) Allergen Fel d I-A chain {Cat (Felis
catus) [TaxId: 9685]}
Length = 72
Score = 28.2 bits (63), Expect = 0.63
Identities = 8/47 (17%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 107 TSKAFLEPAK-FRENLIILKNTEVIKILIDSKL----KAYGVEYINS 148
T ++E ++ ++L+N ++K +D+K+ K + ++
Sbjct: 17 TPDEYVEQVAQYKALPVVLENARILKNCVDAKMTEEDKENALSLLDK 63
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 116
Score = 29.1 bits (64), Expect = 0.69
Identities = 13/102 (12%), Positives = 31/102 (30%), Gaps = 14/102 (13%)
Query: 549 VFRSGNLMYKINDKSAWTPGFVNLQNGILTVKEAPNSPKN--------------ISVIQC 594
V + G L + + + W L+ + S + ++
Sbjct: 11 VVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDN 70
Query: 595 HSFSQVYDKSRPYTFKVNFNPYSFVLFAAPDESQLFDWLQDI 636
+ V + FKV + A +++ +W++ I
Sbjct: 71 GVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAI 112
>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21
{Human (Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 29.2 bits (64), Expect = 0.77
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Query: 565 WTPGFVNLQNGIL------TVKEAPNSPKNISVIQCHSFSQVYDKSRPYTFKVNFNPYSF 618
W +V L+ L + P+ + + Y +++
Sbjct: 27 WKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSETKRKNVFRLTTSDCE 86
Query: 619 VLFAAPDESQLFDWLQDIMISIKINDD 645
LF A D + W++ I S +N++
Sbjct: 87 CLFQAEDRDDMLAWIKTIQESSNLNEE 113
>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 122
Score = 29.1 bits (64), Expect = 0.82
Identities = 10/95 (10%), Positives = 31/95 (32%), Gaps = 12/95 (12%)
Query: 558 KINDKSAWTPGFVNLQNGILTVKEAPNSPKNISVIQCHSFSQVY-----------DKSRP 606
K +++S W ++ + G ++ + K+ + +
Sbjct: 26 KASNRS-WDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKK 84
Query: 607 YTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIK 641
+ +V + L A D++++ W+ +
Sbjct: 85 HVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSD 119
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein
SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 28.7 bits (63), Expect = 0.96
Identities = 18/103 (17%), Positives = 31/103 (30%), Gaps = 10/103 (9%)
Query: 549 VFRSGNLMYKINDKSA----WTPGFVNLQNGILTVKEAPNSPKNISVIQCHSFS------ 598
V + G L K D S W + + G+ S + +S
Sbjct: 1 VIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPH 60
Query: 599 QVYDKSRPYTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIK 641
D + F++ F A ++ DW+ I +K
Sbjct: 61 LRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLLK 103
>d2dk4a1 a.140.6.1 (A:8-70) Pre-mRNA-splicing factor 18 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 63
Score = 27.5 bits (61), Expect = 1.0
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
Query: 393 TSNNNSLNLENILDNI--------VFKVLNKYGEPVMLF 423
TS+N L LE + + V + L + GEP+ LF
Sbjct: 1 TSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLF 39
>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens),
psoriasin s100a7 [TaxId: 9606]}
Length = 100
Score = 27.6 bits (61), Expect = 2.0
Identities = 8/54 (14%), Positives = 20/54 (37%)
Query: 301 SPTNLTAKVQTIFESFTKMSETNININKKQFMSNMDKVFETIKTKFEPFAEGEI 354
S T + + + F K + + I+K ++ M + F + + +
Sbjct: 1 SNTQAERSIIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYL 54
>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 117
Score = 27.7 bits (60), Expect = 2.4
Identities = 16/111 (14%), Positives = 22/111 (19%), Gaps = 11/111 (9%)
Query: 544 TGHDQVFRSGNLMYKINDKSAWTPGFVNL--QNGILTVKEAPNSPKNISVIQCHSFSQVY 601
+G G L K W + L L + + VI V
Sbjct: 3 SGSSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVA 62
Query: 602 ---------DKSRPYTFKVNFNPYSFVLFAAPDESQLFDWLQDIMISIKIN 643
F F A D W+ I +
Sbjct: 63 PGTPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSSG 113
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 72
Score = 25.9 bits (57), Expect = 4.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 52 GYLTVSPRLSPDETVKIIEAAGKELKIG 79
+ V L D ++ I+ GKE++ G
Sbjct: 42 QLVDVYTTLPYDFILEKIKKTGKEVRSG 69
>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId:
9606]}
Length = 426
Score = 27.4 bits (60), Expect = 7.5
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 156 NSTREVILSAGAVGSPQLLMLSGIGIQKHLKEKNITVI-KDLPVGENLQDHVCF 208
++ + +++ AG +G L L+ G + I VI D NL F
Sbjct: 36 DTCKVLVIGAGGLGCELLKNLALSGF------RQIHVIDMDTIDVSNLNRQFLF 83
>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein
MoeB {Escherichia coli [TaxId: 562]}
Length = 247
Score = 26.9 bits (58), Expect = 7.8
Identities = 8/47 (17%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Query: 138 LKAYGVEYINSQGKICHVNSTREVILSAGAVGSPQLLMLSGIGIQKH 184
L+ + + Q + +R +I+ G +G L+ G+
Sbjct: 17 LRGFDFD---GQEAL---KDSRVLIVGLGGLGCAASQYLASAGVGNL 57
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.391
Gapped
Lambda K H
0.267 0.0452 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,729,627
Number of extensions: 129752
Number of successful extensions: 402
Number of sequences better than 10.0: 1
Number of HSP's gapped: 390
Number of HSP's successfully gapped: 43
Length of query: 749
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 657
Effective length of database: 1,144,436
Effective search space: 751894452
Effective search space used: 751894452
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.0 bits)