Query psy3408
Match_columns 146
No_of_seqs 156 out of 1721
Neff 8.0
Searched_HMMs 29240
Date Sat Aug 17 00:15:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3408.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3408hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t37_A Probable dehydrogenase; 99.9 1.2E-25 4E-30 186.3 8.9 109 27-142 15-125 (526)
2 3qvp_A Glucose oxidase; oxidor 99.9 2E-24 6.9E-29 182.8 8.0 117 18-142 8-128 (583)
3 3fim_B ARYL-alcohol oxidase; A 99.9 3.1E-24 1E-28 181.1 7.9 107 29-142 2-112 (566)
4 3q9t_A Choline dehydrogenase a 99.8 5.8E-22 2E-26 167.6 4.9 100 27-134 4-113 (577)
5 1gpe_A Protein (glucose oxidas 99.8 7.8E-21 2.7E-25 160.7 9.6 109 24-141 19-131 (587)
6 2jbv_A Choline oxidase; alcoho 99.8 9.5E-20 3.3E-24 152.8 8.2 104 25-133 9-115 (546)
7 1coy_A Cholesterol oxidase; ox 99.8 4.5E-19 1.5E-23 147.4 7.7 106 26-134 8-135 (507)
8 1n4w_A CHOD, cholesterol oxida 99.7 2E-18 6.8E-23 143.4 7.5 104 28-133 4-129 (504)
9 1ju2_A HydroxynitrIle lyase; f 99.7 1.1E-18 3.7E-23 146.1 4.1 98 27-132 24-124 (536)
10 1kdg_A CDH, cellobiose dehydro 99.6 3.3E-15 1.1E-19 124.8 8.6 92 27-132 5-114 (546)
11 3kkj_A Amine oxidase, flavin-c 99.0 3.5E-10 1.2E-14 82.0 5.4 37 28-65 1-37 (336)
12 3oz2_A Digeranylgeranylglycero 98.9 9.8E-10 3.4E-14 86.2 4.8 38 27-65 2-39 (397)
13 4fk1_A Putative thioredoxin re 98.8 6E-09 2E-13 80.3 5.1 39 25-64 2-40 (304)
14 4gde_A UDP-galactopyranose mut 98.7 1.4E-08 4.9E-13 82.8 5.5 41 27-67 8-48 (513)
15 3fpz_A Thiazole biosynthetic e 98.6 4.3E-08 1.5E-12 76.4 6.0 39 28-66 64-103 (326)
16 4gcm_A TRXR, thioredoxin reduc 98.6 3.9E-08 1.3E-12 75.7 5.4 36 28-64 5-40 (312)
17 4a5l_A Thioredoxin reductase; 98.6 3.1E-08 1.1E-12 75.9 4.5 35 28-63 3-37 (314)
18 3dme_A Conserved exported prot 98.6 5.1E-08 1.8E-12 75.8 5.3 36 28-64 3-38 (369)
19 1ryi_A Glycine oxidase; flavop 98.5 6.6E-08 2.3E-12 76.1 5.1 41 23-64 11-51 (382)
20 3rp8_A Flavoprotein monooxygen 98.5 7.9E-08 2.7E-12 76.7 5.4 39 26-65 20-58 (407)
21 2bcg_G Secretory pathway GDP d 98.5 1E-07 3.5E-12 77.7 5.8 41 26-67 8-48 (453)
22 2oln_A NIKD protein; flavoprot 98.5 8.4E-08 2.9E-12 76.1 5.1 37 28-65 3-39 (397)
23 3cgv_A Geranylgeranyl reductas 98.5 8.3E-08 2.8E-12 75.7 4.8 37 28-65 3-39 (397)
24 3dje_A Fructosyl amine: oxygen 98.5 1.6E-07 5.3E-12 75.6 5.9 37 28-65 5-42 (438)
25 1yvv_A Amine oxidase, flavin-c 98.5 1.6E-07 5.4E-12 72.6 5.4 36 29-65 2-37 (336)
26 3k7m_X 6-hydroxy-L-nicotine ox 98.5 1.2E-07 4E-12 76.0 4.7 35 30-65 2-36 (431)
27 4at0_A 3-ketosteroid-delta4-5a 98.4 1.5E-07 5.3E-12 77.8 5.1 38 27-65 39-76 (510)
28 1c0p_A D-amino acid oxidase; a 98.4 2.2E-07 7.5E-12 73.0 5.5 35 28-63 5-39 (363)
29 2gf3_A MSOX, monomeric sarcosi 98.4 1.9E-07 6.6E-12 73.4 5.0 37 28-65 2-38 (389)
30 3nix_A Flavoprotein/dehydrogen 98.4 1.9E-07 6.3E-12 74.5 4.9 37 28-65 4-40 (421)
31 2uzz_A N-methyl-L-tryptophan o 98.4 1.5E-07 5.1E-12 73.8 4.1 36 29-65 2-37 (372)
32 1y56_B Sarcosine oxidase; dehy 98.4 2.5E-07 8.7E-12 72.8 5.4 35 28-63 4-38 (382)
33 3ka7_A Oxidoreductase; structu 98.4 2.1E-07 7.2E-12 74.3 4.7 35 30-65 1-35 (425)
34 1v0j_A UDP-galactopyranose mut 98.4 3.3E-07 1.1E-11 73.7 5.8 40 27-66 5-44 (399)
35 2gqf_A Hypothetical protein HI 98.4 2.3E-07 7.8E-12 74.8 4.9 37 28-65 3-39 (401)
36 3v76_A Flavoprotein; structura 98.4 2.7E-07 9.2E-12 74.9 5.3 37 28-65 26-62 (417)
37 2cul_A Glucose-inhibited divis 98.4 3.4E-07 1.2E-11 68.2 5.3 34 28-62 2-35 (232)
38 2gag_B Heterotetrameric sarcos 98.4 2.8E-07 9.7E-12 72.9 5.0 37 27-64 19-57 (405)
39 4dgk_A Phytoene dehydrogenase; 98.4 2E-07 6.7E-12 76.1 4.2 36 30-66 2-37 (501)
40 1k0i_A P-hydroxybenzoate hydro 98.4 3.6E-07 1.2E-11 72.4 5.2 35 29-64 2-36 (394)
41 1rp0_A ARA6, thiazole biosynth 98.4 3.7E-07 1.2E-11 70.1 5.1 38 28-65 38-75 (284)
42 3lad_A Dihydrolipoamide dehydr 98.4 3.8E-07 1.3E-11 74.5 5.3 35 28-63 2-36 (476)
43 3p1w_A Rabgdi protein; GDI RAB 98.3 4.6E-07 1.6E-11 75.0 5.4 41 25-66 16-56 (475)
44 3c96_A Flavin-containing monoo 98.3 4.7E-07 1.6E-11 72.4 5.3 37 28-65 3-40 (410)
45 3da1_A Glycerol-3-phosphate de 98.3 4E-07 1.4E-11 76.4 5.1 37 27-64 16-52 (561)
46 3fmw_A Oxygenase; mithramycin, 98.3 4.5E-07 1.5E-11 76.3 5.3 38 27-65 47-84 (570)
47 3nyc_A D-arginine dehydrogenas 98.3 3.6E-07 1.2E-11 71.5 4.5 37 27-65 7-43 (381)
48 3nrn_A Uncharacterized protein 98.3 4.5E-07 1.5E-11 72.6 5.1 36 30-66 1-36 (421)
49 3alj_A 2-methyl-3-hydroxypyrid 98.3 4.8E-07 1.6E-11 71.6 5.1 38 27-65 9-46 (379)
50 2i0z_A NAD(FAD)-utilizing dehy 98.3 5.4E-07 1.8E-11 73.3 5.5 37 28-65 25-61 (447)
51 3i6d_A Protoporphyrinogen oxid 98.3 3.1E-07 1E-11 73.9 4.0 37 29-66 5-47 (470)
52 3urh_A Dihydrolipoyl dehydroge 98.3 5.4E-07 1.8E-11 74.0 5.5 38 27-65 23-60 (491)
53 2x3n_A Probable FAD-dependent 98.3 5.3E-07 1.8E-11 71.6 5.2 37 28-65 5-41 (399)
54 3atr_A Conserved archaeal prot 98.3 2.8E-07 9.5E-12 74.9 3.6 36 28-64 5-40 (453)
55 2qa1_A PGAE, polyketide oxygen 98.3 6.4E-07 2.2E-11 74.1 5.9 40 25-65 7-46 (500)
56 2xdo_A TETX2 protein; tetracyc 98.3 6.2E-07 2.1E-11 71.4 5.3 37 28-65 25-61 (398)
57 2b9w_A Putative aminooxidase; 98.3 6.9E-07 2.4E-11 71.4 5.6 38 28-66 5-43 (424)
58 2qcu_A Aerobic glycerol-3-phos 98.3 5.4E-07 1.9E-11 74.3 5.1 36 28-64 2-37 (501)
59 3jsk_A Cypbp37 protein; octame 98.3 7.2E-07 2.5E-11 71.0 5.6 38 28-65 78-116 (344)
60 3pvc_A TRNA 5-methylaminomethy 98.3 7.5E-07 2.6E-11 76.3 6.0 37 28-65 263-299 (689)
61 3fbs_A Oxidoreductase; structu 98.3 7.1E-07 2.4E-11 67.4 5.3 35 29-64 2-36 (297)
62 1rsg_A FMS1 protein; FAD bindi 98.3 4.7E-07 1.6E-11 74.7 4.6 38 28-66 7-45 (516)
63 1i8t_A UDP-galactopyranose mut 98.3 6.3E-07 2.2E-11 71.3 5.1 37 29-66 1-37 (367)
64 1s3e_A Amine oxidase [flavin-c 98.3 5.8E-07 2E-11 74.1 5.0 38 28-66 3-40 (520)
65 3hdq_A UDP-galactopyranose mut 98.3 7.5E-07 2.6E-11 72.1 5.6 40 26-66 26-65 (397)
66 3itj_A Thioredoxin reductase 1 98.3 4.9E-07 1.7E-11 69.5 4.3 37 26-63 19-55 (338)
67 2ivd_A PPO, PPOX, protoporphyr 98.3 5.6E-07 1.9E-11 73.0 4.6 39 27-66 14-52 (478)
68 4a9w_A Monooxygenase; baeyer-v 98.3 6.8E-07 2.3E-11 69.0 4.9 37 28-65 2-38 (357)
69 3i3l_A Alkylhalidase CMLS; fla 98.3 7.3E-07 2.5E-11 75.4 5.4 38 27-65 21-58 (591)
70 3o0h_A Glutathione reductase; 98.3 7.7E-07 2.6E-11 73.0 5.4 33 29-62 26-58 (484)
71 1y0p_A Fumarate reductase flav 98.3 7.2E-07 2.5E-11 74.7 5.2 38 27-65 124-161 (571)
72 3axb_A Putative oxidoreductase 98.3 5.7E-07 2E-11 72.6 4.4 34 28-62 22-56 (448)
73 2yg5_A Putrescine oxidase; oxi 98.3 6.8E-07 2.3E-11 72.0 4.9 38 28-66 4-41 (453)
74 2qa2_A CABE, polyketide oxygen 98.3 8.4E-07 2.9E-11 73.4 5.5 40 25-65 8-47 (499)
75 1qo8_A Flavocytochrome C3 fuma 98.3 7.1E-07 2.4E-11 74.7 5.1 38 27-65 119-156 (566)
76 3ps9_A TRNA 5-methylaminomethy 98.3 9.8E-07 3.3E-11 75.3 6.0 36 29-65 272-307 (676)
77 2vou_A 2,6-dihydroxypyridine h 98.3 8.2E-07 2.8E-11 70.7 5.2 36 28-64 4-39 (397)
78 3l8k_A Dihydrolipoyl dehydroge 98.3 7.6E-07 2.6E-11 72.7 5.0 37 28-65 3-39 (466)
79 3e1t_A Halogenase; flavoprotei 98.3 6.3E-07 2.1E-11 74.1 4.5 37 28-65 6-42 (512)
80 3f8d_A Thioredoxin reductase ( 98.3 9.7E-07 3.3E-11 67.3 5.2 34 28-62 14-47 (323)
81 3nks_A Protoporphyrinogen oxid 98.3 6.5E-07 2.2E-11 72.5 4.4 37 29-66 2-40 (477)
82 2jae_A L-amino acid oxidase; o 98.3 1E-06 3.5E-11 71.8 5.6 39 27-66 9-47 (489)
83 2zbw_A Thioredoxin reductase; 98.3 1.1E-06 3.9E-11 67.7 5.6 37 28-65 4-40 (335)
84 3ihg_A RDME; flavoenzyme, anth 98.2 9.2E-07 3.1E-11 73.3 5.2 37 28-65 4-40 (535)
85 3ab1_A Ferredoxin--NADP reduct 98.2 1.1E-06 3.6E-11 68.8 5.3 39 26-65 11-49 (360)
86 2wdq_A Succinate dehydrogenase 98.2 8.4E-07 2.9E-11 74.9 5.0 36 28-64 6-41 (588)
87 2gmh_A Electron transfer flavo 98.2 8E-07 2.8E-11 74.9 4.7 38 28-65 34-76 (584)
88 3dk9_A Grase, GR, glutathione 98.2 9.3E-07 3.2E-11 72.3 4.9 36 27-63 18-53 (478)
89 3cty_A Thioredoxin reductase; 98.2 1.1E-06 3.6E-11 67.7 5.0 36 26-62 13-48 (319)
90 3nlc_A Uncharacterized protein 98.2 9.2E-07 3.1E-11 74.3 5.0 36 28-64 106-141 (549)
91 1sez_A Protoporphyrinogen oxid 98.2 9.7E-07 3.3E-11 72.2 5.0 40 26-66 10-49 (504)
92 4dna_A Probable glutathione re 98.2 1.1E-06 3.7E-11 71.7 5.0 34 28-62 4-37 (463)
93 3lzw_A Ferredoxin--NADP reduct 98.2 1.2E-06 4E-11 67.2 4.9 37 28-65 6-42 (332)
94 2q7v_A Thioredoxin reductase; 98.2 1.2E-06 4.2E-11 67.5 5.1 35 27-62 6-40 (325)
95 1d5t_A Guanine nucleotide diss 98.2 1.6E-06 5.4E-11 70.4 5.9 39 27-66 4-42 (433)
96 2rgh_A Alpha-glycerophosphate 98.2 1.1E-06 3.9E-11 73.8 5.2 36 28-64 31-66 (571)
97 2vvm_A Monoamine oxidase N; FA 98.2 1.2E-06 4E-11 71.6 5.1 37 29-66 39-75 (495)
98 3ihm_A Styrene monooxygenase A 98.2 9.2E-07 3.1E-11 71.6 4.4 35 28-63 21-55 (430)
99 3lov_A Protoporphyrinogen oxid 98.2 1.1E-06 3.9E-11 71.2 4.9 37 28-65 3-41 (475)
100 3qj4_A Renalase; FAD/NAD(P)-bi 98.2 9.3E-07 3.2E-11 68.9 4.2 35 30-65 2-39 (342)
101 3dgh_A TRXR-1, thioredoxin red 98.2 1.4E-06 4.6E-11 71.4 5.3 35 27-62 7-41 (483)
102 3g3e_A D-amino-acid oxidase; F 98.2 1E-06 3.5E-11 68.8 4.3 34 30-64 1-40 (351)
103 3c4n_A Uncharacterized protein 98.2 1.2E-06 4E-11 70.2 4.6 37 28-64 35-72 (405)
104 4hb9_A Similarities with proba 98.2 1.4E-06 4.9E-11 68.5 5.0 35 30-65 2-36 (412)
105 3d1c_A Flavin-containing putat 98.2 1.5E-06 5.1E-11 67.9 5.0 35 28-63 3-38 (369)
106 2h88_A Succinate dehydrogenase 98.2 1.2E-06 4.1E-11 74.6 4.8 37 27-64 16-52 (621)
107 3qfa_A Thioredoxin reductase 1 98.2 1.8E-06 6.2E-11 71.6 5.6 36 27-63 30-65 (519)
108 2r0c_A REBC; flavin adenine di 98.2 1.5E-06 5E-11 72.6 5.0 37 28-65 25-61 (549)
109 3ic9_A Dihydrolipoamide dehydr 98.2 1.4E-06 5E-11 71.7 4.8 34 29-63 8-41 (492)
110 2ywl_A Thioredoxin reductase r 98.2 2.1E-06 7.3E-11 60.9 5.1 34 30-64 2-35 (180)
111 3pl8_A Pyranose 2-oxidase; sub 98.2 1.7E-06 5.8E-11 73.6 5.3 38 28-66 45-82 (623)
112 3ces_A MNMG, tRNA uridine 5-ca 98.2 1.8E-06 6E-11 73.9 5.3 35 28-63 27-61 (651)
113 2qae_A Lipoamide, dihydrolipoy 98.2 2E-06 7E-11 70.0 5.5 36 29-65 2-37 (468)
114 2aqj_A Tryptophan halogenase, 98.2 1.9E-06 6.6E-11 71.5 5.4 37 28-65 4-43 (538)
115 2e1m_A L-glutamate oxidase; L- 98.2 2.1E-06 7.2E-11 69.0 5.4 38 27-65 42-80 (376)
116 3dgz_A Thioredoxin reductase 2 98.1 1.7E-06 5.8E-11 71.0 4.8 35 27-62 4-38 (488)
117 1ojt_A Surface protein; redox- 98.1 2.1E-06 7.2E-11 70.4 5.3 38 27-65 4-41 (482)
118 1dxl_A Dihydrolipoamide dehydr 98.1 2.8E-06 9.5E-11 69.1 5.8 37 28-65 5-41 (470)
119 1w4x_A Phenylacetone monooxyge 98.1 2.6E-06 9E-11 70.9 5.7 38 27-65 14-51 (542)
120 3r9u_A Thioredoxin reductase; 98.1 1.8E-06 6.3E-11 65.6 4.4 35 27-62 2-37 (315)
121 2weu_A Tryptophan 5-halogenase 98.1 1.4E-06 4.9E-11 71.6 4.0 35 29-64 2-39 (511)
122 2bs2_A Quinol-fumarate reducta 98.1 1.8E-06 6.2E-11 74.0 4.8 36 28-64 4-39 (660)
123 2bry_A NEDD9 interacting prote 98.1 2.8E-06 9.4E-11 70.2 5.7 38 27-65 90-127 (497)
124 1v59_A Dihydrolipoamide dehydr 98.1 2E-06 6.8E-11 70.2 4.8 37 28-65 4-40 (478)
125 1onf_A GR, grase, glutathione 98.1 2.4E-06 8.2E-11 70.4 5.3 34 29-63 2-35 (500)
126 1zmd_A Dihydrolipoyl dehydroge 98.1 2.5E-06 8.6E-11 69.6 5.3 37 28-65 5-41 (474)
127 2zxi_A TRNA uridine 5-carboxym 98.1 2.3E-06 7.9E-11 73.0 5.2 35 28-63 26-60 (637)
128 2yqu_A 2-oxoglutarate dehydrog 98.1 2.7E-06 9.1E-11 69.1 5.4 36 29-65 1-36 (455)
129 2dkh_A 3-hydroxybenzoate hydro 98.1 2.2E-06 7.5E-11 72.8 5.1 37 28-65 31-68 (639)
130 3gyx_A Adenylylsulfate reducta 98.1 2.3E-06 7.7E-11 73.4 5.1 38 28-65 21-63 (662)
131 2bi7_A UDP-galactopyranose mut 98.1 2.8E-06 9.4E-11 68.0 5.3 37 29-66 3-39 (384)
132 2hqm_A GR, grase, glutathione 98.1 2.5E-06 8.5E-11 69.9 5.1 35 28-63 10-44 (479)
133 3s5w_A L-ornithine 5-monooxyge 98.1 2.4E-06 8.2E-11 69.1 5.0 38 28-66 29-71 (463)
134 1trb_A Thioredoxin reductase; 98.1 1.6E-06 5.6E-11 66.3 3.6 34 28-62 4-37 (320)
135 2r9z_A Glutathione amide reduc 98.1 2.8E-06 9.6E-11 69.4 5.2 35 28-63 3-37 (463)
136 1jnr_A Adenylylsulfate reducta 98.1 2.2E-06 7.7E-11 73.0 4.8 37 27-64 20-60 (643)
137 1kf6_A Fumarate reductase flav 98.1 2.7E-06 9.2E-11 72.0 5.2 36 28-64 4-41 (602)
138 2a87_A TRXR, TR, thioredoxin r 98.1 1.9E-06 6.4E-11 66.9 3.9 36 26-62 11-46 (335)
139 1zk7_A HGII, reductase, mercur 98.1 3E-06 1E-10 69.0 5.3 35 28-63 3-37 (467)
140 1chu_A Protein (L-aspartate ox 98.1 2.1E-06 7E-11 71.8 4.4 36 28-65 7-42 (540)
141 1mo9_A ORF3; nucleotide bindin 98.1 3.7E-06 1.3E-10 69.7 5.9 38 26-64 40-77 (523)
142 2a8x_A Dihydrolipoyl dehydroge 98.1 2.3E-06 8E-11 69.6 4.6 33 29-62 3-35 (464)
143 2e4g_A Tryptophan halogenase; 98.1 3.4E-06 1.2E-10 70.4 5.7 37 28-65 24-63 (550)
144 2q0l_A TRXR, thioredoxin reduc 98.1 2.7E-06 9.3E-11 65.0 4.7 32 30-62 2-34 (311)
145 3cp8_A TRNA uridine 5-carboxym 98.1 2.8E-06 9.6E-11 72.6 5.1 37 26-63 18-54 (641)
146 1ges_A Glutathione reductase; 98.1 2.7E-06 9.1E-11 69.2 4.8 35 28-63 3-37 (450)
147 4b1b_A TRXR, thioredoxin reduc 98.1 2.6E-06 8.9E-11 71.4 4.8 34 29-63 42-75 (542)
148 2gv8_A Monooxygenase; FMO, FAD 98.1 4.5E-06 1.5E-10 67.6 6.0 37 28-65 5-43 (447)
149 1pj5_A N,N-dimethylglycine oxi 98.1 2.9E-06 9.9E-11 74.0 5.1 36 28-64 3-39 (830)
150 1ebd_A E3BD, dihydrolipoamide 98.1 3.2E-06 1.1E-10 68.6 5.0 34 28-62 2-35 (455)
151 4ap3_A Steroid monooxygenase; 98.1 3.5E-06 1.2E-10 70.6 5.2 38 27-65 19-56 (549)
152 4dsg_A UDP-galactopyranose mut 98.1 4.5E-06 1.5E-10 68.7 5.7 38 28-66 8-46 (484)
153 2gjc_A Thiazole biosynthetic e 98.1 3.8E-06 1.3E-10 66.4 5.0 39 28-66 64-103 (326)
154 2e5v_A L-aspartate oxidase; ar 98.1 3.4E-06 1.2E-10 69.2 4.8 31 31-62 1-31 (472)
155 2iid_A L-amino-acid oxidase; f 98.1 4E-06 1.4E-10 68.4 5.2 38 28-66 32-69 (498)
156 1vdc_A NTR, NADPH dependent th 98.1 2.4E-06 8.1E-11 65.9 3.6 33 28-61 7-39 (333)
157 2pyx_A Tryptophan halogenase; 98.0 3.5E-06 1.2E-10 69.8 4.8 37 28-65 6-54 (526)
158 1fl2_A Alkyl hydroperoxide red 98.0 3.6E-06 1.2E-10 64.2 4.5 33 29-62 1-33 (310)
159 2eq6_A Pyruvate dehydrogenase 98.0 4.2E-06 1.4E-10 68.3 5.0 34 29-63 6-39 (464)
160 1lvl_A Dihydrolipoamide dehydr 98.0 4.7E-06 1.6E-10 67.9 5.1 34 28-62 4-37 (458)
161 3c4a_A Probable tryptophan hyd 98.0 4.1E-06 1.4E-10 66.4 4.6 36 30-65 1-37 (381)
162 1fec_A Trypanothione reductase 98.0 5.3E-06 1.8E-10 68.2 5.4 32 28-60 2-34 (490)
163 2wpf_A Trypanothione reductase 98.0 5.4E-06 1.8E-10 68.3 5.2 34 27-61 5-39 (495)
164 3k30_A Histamine dehydrogenase 98.0 7E-06 2.4E-10 70.3 6.0 38 27-65 389-426 (690)
165 3uox_A Otemo; baeyer-villiger 98.0 6E-06 2E-10 69.1 5.4 38 27-65 7-44 (545)
166 1pn0_A Phenol 2-monooxygenase; 98.0 5.1E-06 1.7E-10 71.1 5.0 37 28-65 7-48 (665)
167 3gwf_A Cyclohexanone monooxyge 98.0 5.5E-06 1.9E-10 69.2 5.1 37 28-65 7-44 (540)
168 1xdi_A RV3303C-LPDA; reductase 98.0 4.6E-06 1.6E-10 68.6 4.2 35 29-63 2-38 (499)
169 1vg0_A RAB proteins geranylger 98.0 8.7E-06 3E-10 69.7 5.9 42 25-67 4-45 (650)
170 4gut_A Lysine-specific histone 98.0 9.5E-06 3.2E-10 70.7 6.0 39 27-66 334-372 (776)
171 1b37_A Protein (polyamine oxid 97.9 8.6E-06 3E-10 66.2 5.1 38 28-66 3-41 (472)
172 2vdc_G Glutamate synthase [NAD 97.9 1.2E-05 4.1E-10 65.9 5.6 38 27-65 120-157 (456)
173 2x8g_A Thioredoxin glutathione 97.9 9.7E-06 3.3E-10 68.1 4.9 35 27-62 105-139 (598)
174 3g5s_A Methylenetetrahydrofola 97.9 1.2E-05 4.2E-10 65.5 5.2 34 30-64 2-35 (443)
175 3lxd_A FAD-dependent pyridine 97.9 1.5E-05 5E-10 63.9 5.6 38 27-65 7-46 (415)
176 2xve_A Flavin-containing monoo 97.9 1.2E-05 4.3E-10 65.6 5.2 36 29-65 2-43 (464)
177 1d4d_A Flavocytochrome C fumar 97.9 1.1E-05 3.7E-10 67.7 4.7 38 28-66 125-162 (572)
178 1q1r_A Putidaredoxin reductase 97.8 1.7E-05 5.9E-10 64.1 5.2 37 28-65 3-41 (431)
179 2bc0_A NADH oxidase; flavoprot 97.8 1.4E-05 4.8E-10 65.6 4.5 37 28-65 34-73 (490)
180 1hyu_A AHPF, alkyl hydroperoxi 97.8 1.8E-05 6.1E-10 65.6 4.9 35 27-62 210-244 (521)
181 2v3a_A Rubredoxin reductase; a 97.8 1.9E-05 6.7E-10 62.6 4.8 35 28-63 3-39 (384)
182 1ps9_A 2,4-dienoyl-COA reducta 97.8 2.7E-05 9.1E-10 66.4 5.7 37 28-65 372-408 (671)
183 3kd9_A Coenzyme A disulfide re 97.8 2.7E-05 9.4E-10 63.0 5.5 37 29-65 3-40 (449)
184 2cdu_A NADPH oxidase; flavoenz 97.8 2.2E-05 7.5E-10 63.6 4.8 36 30-65 1-37 (452)
185 3oc4_A Oxidoreductase, pyridin 97.8 2.2E-05 7.5E-10 63.7 4.7 37 30-66 3-40 (452)
186 3h28_A Sulfide-quinone reducta 97.8 2.5E-05 8.4E-10 62.9 4.8 37 29-65 2-39 (430)
187 2gqw_A Ferredoxin reductase; f 97.8 3.6E-05 1.2E-09 61.7 5.8 37 28-65 6-44 (408)
188 1o94_A Tmadh, trimethylamine d 97.7 2.9E-05 9.9E-10 67.0 5.4 38 27-65 387-424 (729)
189 3h8l_A NADH oxidase; membrane 97.7 2.4E-05 8.3E-10 62.4 4.6 34 30-64 2-38 (409)
190 2z3y_A Lysine-specific histone 97.7 3.1E-05 1.1E-09 66.1 5.4 39 27-66 105-143 (662)
191 2gag_A Heterotetrameric sarcos 97.7 2.7E-05 9.1E-10 69.2 5.1 38 28-66 127-164 (965)
192 3cgb_A Pyridine nucleotide-dis 97.7 3.3E-05 1.1E-09 63.3 5.0 37 29-65 36-73 (480)
193 1y56_A Hypothetical protein PH 97.7 1.9E-05 6.6E-10 65.0 3.6 36 28-65 107-142 (493)
194 1xhc_A NADH oxidase /nitrite r 97.7 2.6E-05 8.8E-10 61.9 4.2 35 29-65 8-42 (367)
195 3iwa_A FAD-dependent pyridine 97.7 2.3E-05 7.8E-10 63.9 3.9 37 29-65 3-40 (472)
196 1nhp_A NADH peroxidase; oxidor 97.7 3.6E-05 1.2E-09 62.2 5.1 36 30-65 1-37 (447)
197 1m6i_A Programmed cell death p 97.7 3.9E-05 1.3E-09 63.1 5.3 40 27-66 9-49 (493)
198 3fg2_P Putative rubredoxin red 97.7 4.3E-05 1.5E-09 61.0 5.3 35 30-65 2-38 (404)
199 3ef6_A Toluene 1,2-dioxygenase 97.6 6.6E-05 2.3E-09 60.2 5.3 36 30-66 3-40 (410)
200 2xag_A Lysine-specific histone 97.6 7.3E-05 2.5E-09 65.8 5.8 39 27-66 276-314 (852)
201 3sx6_A Sulfide-quinone reducta 97.6 5.3E-05 1.8E-09 61.2 4.4 36 29-65 4-42 (437)
202 3ics_A Coenzyme A-disulfide re 97.6 6E-05 2.1E-09 63.0 4.8 39 27-65 34-73 (588)
203 1gte_A Dihydropyrimidine dehyd 97.6 7.8E-05 2.7E-09 66.6 5.6 37 28-65 186-223 (1025)
204 1cjc_A Protein (adrenodoxin re 97.6 7.9E-05 2.7E-09 61.0 5.1 37 28-65 5-43 (460)
205 1lqt_A FPRA; NADP+ derivative, 97.5 8E-05 2.8E-09 60.9 4.6 38 28-65 2-45 (456)
206 3ntd_A FAD-dependent pyridine 97.5 0.00012 4.2E-09 60.6 5.1 37 30-66 2-39 (565)
207 3klj_A NAD(FAD)-dependent dehy 97.3 0.00023 7.8E-09 56.9 5.1 40 26-66 6-45 (385)
208 4eqs_A Coenzyme A disulfide re 97.3 0.0002 6.8E-09 58.0 4.7 34 31-65 2-37 (437)
209 3vrd_B FCCB subunit, flavocyto 97.3 0.00029 1E-08 55.8 5.0 34 31-64 4-38 (401)
210 3ayj_A Pro-enzyme of L-phenyla 97.2 0.00024 8.1E-09 61.5 4.6 36 29-65 56-100 (721)
211 4b63_A L-ornithine N5 monooxyg 97.2 0.00056 1.9E-08 56.4 6.3 40 26-65 36-88 (501)
212 4g6h_A Rotenone-insensitive NA 97.2 0.00025 8.6E-09 58.6 4.0 36 28-64 41-76 (502)
213 3hyw_A Sulfide-quinone reducta 97.1 0.0005 1.7E-08 55.4 4.8 34 31-64 4-38 (430)
214 1nhp_A NADH peroxidase; oxidor 96.1 0.0068 2.3E-07 48.8 5.2 36 29-65 149-184 (447)
215 3fwz_A Inner membrane protein 96.1 0.011 3.9E-07 40.1 5.6 35 29-64 7-41 (140)
216 3klj_A NAD(FAD)-dependent dehy 95.9 0.011 3.6E-07 47.1 5.1 35 30-65 147-181 (385)
217 3llv_A Exopolyphosphatase-rela 95.8 0.013 4.5E-07 39.5 4.9 33 30-63 7-39 (141)
218 1id1_A Putative potassium chan 95.8 0.016 5.4E-07 39.8 5.2 33 29-62 3-35 (153)
219 4gcm_A TRXR, thioredoxin reduc 95.8 0.0093 3.2E-07 45.2 4.4 34 31-65 147-180 (312)
220 1lss_A TRK system potassium up 95.8 0.014 4.9E-07 38.7 4.8 33 30-63 5-37 (140)
221 1lvl_A Dihydrolipoamide dehydr 95.7 0.013 4.4E-07 47.5 4.9 35 30-65 172-206 (458)
222 1ebd_A E3BD, dihydrolipoamide 95.5 0.017 5.7E-07 46.6 5.2 35 30-65 171-205 (455)
223 2g1u_A Hypothetical protein TM 95.5 0.019 6.6E-07 39.5 4.8 35 29-64 19-53 (155)
224 2yqu_A 2-oxoglutarate dehydrog 95.5 0.016 5.3E-07 46.8 4.9 35 30-65 168-202 (455)
225 2eq6_A Pyruvate dehydrogenase 95.5 0.017 5.7E-07 46.9 5.0 35 30-65 170-204 (464)
226 2v3a_A Rubredoxin reductase; a 95.4 0.021 7.3E-07 44.9 5.2 35 30-65 146-180 (384)
227 1xhc_A NADH oxidase /nitrite r 95.4 0.017 5.8E-07 45.5 4.6 35 30-65 144-178 (367)
228 4a5l_A Thioredoxin reductase; 95.2 0.019 6.6E-07 43.2 4.4 35 30-65 153-187 (314)
229 1v59_A Dihydrolipoamide dehydr 95.2 0.023 7.8E-07 46.0 5.0 35 30-65 184-218 (478)
230 1ges_A Glutathione reductase; 95.0 0.026 8.9E-07 45.5 4.9 35 30-65 168-202 (450)
231 2gqw_A Ferredoxin reductase; f 94.9 0.033 1.1E-06 44.3 5.2 35 30-65 146-180 (408)
232 2bc0_A NADH oxidase; flavoprot 94.8 0.037 1.3E-06 45.1 5.2 35 30-65 195-229 (490)
233 3d1c_A Flavin-containing putat 94.7 0.033 1.1E-06 42.9 4.6 34 31-65 168-201 (369)
234 2hmt_A YUAA protein; RCK, KTN, 94.7 0.04 1.4E-06 36.6 4.3 32 31-63 8-39 (144)
235 2r9z_A Glutathione amide reduc 94.6 0.04 1.4E-06 44.6 5.0 35 30-65 167-201 (463)
236 1ojt_A Surface protein; redox- 94.6 0.041 1.4E-06 44.7 4.9 35 30-65 186-220 (482)
237 3ic5_A Putative saccharopine d 94.5 0.046 1.6E-06 35.0 4.2 33 30-63 6-39 (118)
238 1zmd_A Dihydrolipoyl dehydroge 94.5 0.045 1.5E-06 44.2 5.0 35 30-65 179-213 (474)
239 3l4b_C TRKA K+ channel protien 94.5 0.041 1.4E-06 39.9 4.3 32 31-63 2-33 (218)
240 3cgb_A Pyridine nucleotide-dis 94.5 0.026 9E-07 45.9 3.5 36 29-65 186-221 (480)
241 2a8x_A Dihydrolipoyl dehydroge 94.5 0.046 1.6E-06 44.1 5.0 35 30-65 172-206 (464)
242 4eqs_A Coenzyme A disulfide re 94.4 0.052 1.8E-06 43.7 5.1 34 31-65 149-182 (437)
243 3kd9_A Coenzyme A disulfide re 94.4 0.054 1.9E-06 43.5 5.2 36 30-66 149-184 (449)
244 3ic9_A Dihydrolipoamide dehydr 94.3 0.053 1.8E-06 44.3 5.1 35 30-65 175-209 (492)
245 1q1r_A Putidaredoxin reductase 94.3 0.053 1.8E-06 43.5 5.0 35 30-65 150-184 (431)
246 1dxl_A Dihydrolipoamide dehydr 94.2 0.04 1.4E-06 44.4 4.1 35 30-65 178-212 (470)
247 2q0l_A TRXR, thioredoxin reduc 94.2 0.057 2E-06 40.6 4.7 35 30-65 144-178 (311)
248 1fl2_A Alkyl hydroperoxide red 94.1 0.055 1.9E-06 40.7 4.5 35 30-65 145-179 (310)
249 3c85_A Putative glutathione-re 94.1 0.061 2.1E-06 37.8 4.5 34 29-63 39-73 (183)
250 3ef6_A Toluene 1,2-dioxygenase 94.1 0.061 2.1E-06 42.7 5.0 35 30-65 144-178 (410)
251 2hqm_A GR, grase, glutathione 94.1 0.057 2E-06 43.8 4.8 35 30-65 186-220 (479)
252 1onf_A GR, grase, glutathione 94.0 0.056 1.9E-06 44.2 4.6 35 30-65 177-211 (500)
253 2gv8_A Monooxygenase; FMO, FAD 94.0 0.059 2E-06 43.2 4.7 34 30-64 213-247 (447)
254 2cdu_A NADPH oxidase; flavoenz 94.0 0.067 2.3E-06 42.9 5.0 35 30-65 150-184 (452)
255 2xve_A Flavin-containing monoo 94.0 0.062 2.1E-06 43.6 4.7 35 30-65 198-232 (464)
256 3i83_A 2-dehydropantoate 2-red 93.9 0.072 2.5E-06 41.1 4.9 33 30-63 3-35 (320)
257 1zk7_A HGII, reductase, mercur 93.9 0.075 2.6E-06 42.8 5.1 35 30-65 177-211 (467)
258 3gwf_A Cyclohexanone monooxyge 93.8 0.064 2.2E-06 44.6 4.7 34 30-64 179-212 (540)
259 1vdc_A NTR, NADPH dependent th 93.8 0.067 2.3E-06 40.6 4.5 35 30-65 160-194 (333)
260 3uox_A Otemo; baeyer-villiger 93.7 0.062 2.1E-06 44.7 4.5 36 29-65 185-220 (545)
261 4ap3_A Steroid monooxygenase; 93.7 0.074 2.5E-06 44.3 4.9 34 30-64 192-225 (549)
262 3urh_A Dihydrolipoyl dehydroge 93.7 0.079 2.7E-06 43.0 4.9 34 31-65 200-233 (491)
263 2qae_A Lipoamide, dihydrolipoy 93.7 0.081 2.8E-06 42.7 5.0 35 30-65 175-209 (468)
264 3ntd_A FAD-dependent pyridine 93.6 0.088 3E-06 43.3 5.2 34 31-65 153-186 (565)
265 3hn2_A 2-dehydropantoate 2-red 93.6 0.073 2.5E-06 40.9 4.4 33 30-63 3-35 (312)
266 2a87_A TRXR, TR, thioredoxin r 93.6 0.077 2.6E-06 40.5 4.5 36 29-65 155-190 (335)
267 1ks9_A KPA reductase;, 2-dehyd 93.6 0.1 3.5E-06 39.0 5.0 33 31-64 2-34 (291)
268 3lxd_A FAD-dependent pyridine 93.5 0.1 3.4E-06 41.4 5.2 35 30-65 153-187 (415)
269 2q7v_A Thioredoxin reductase; 93.5 0.083 2.8E-06 40.0 4.6 35 30-65 153-187 (325)
270 2zbw_A Thioredoxin reductase; 93.4 0.069 2.4E-06 40.6 3.9 35 30-65 153-187 (335)
271 1trb_A Thioredoxin reductase; 93.4 0.087 3E-06 39.6 4.4 35 30-65 146-180 (320)
272 3fg2_P Putative rubredoxin red 93.4 0.1 3.5E-06 41.2 5.0 35 30-65 143-177 (404)
273 3l8k_A Dihydrolipoyl dehydroge 93.4 0.099 3.4E-06 42.2 5.0 35 30-65 173-207 (466)
274 3g17_A Similar to 2-dehydropan 93.3 0.1 3.5E-06 39.7 4.6 34 30-64 3-36 (294)
275 2x8g_A Thioredoxin glutathione 93.2 0.1 3.5E-06 43.5 5.0 31 31-62 288-318 (598)
276 3dk9_A Grase, GR, glutathione 93.2 0.1 3.5E-06 42.2 4.9 35 30-65 188-222 (478)
277 3l9w_A Glutathione-regulated p 93.1 0.11 3.8E-06 41.8 4.9 34 30-64 5-38 (413)
278 3itj_A Thioredoxin reductase 1 93.1 0.1 3.5E-06 39.4 4.4 35 30-65 174-208 (338)
279 3cty_A Thioredoxin reductase; 93.0 0.1 3.5E-06 39.5 4.3 35 30-65 156-190 (319)
280 3lad_A Dihydrolipoamide dehydr 93.0 0.13 4.5E-06 41.4 5.2 35 30-65 181-215 (476)
281 4g65_A TRK system potassium up 92.9 0.058 2E-06 44.1 3.0 34 30-64 4-37 (461)
282 3oc4_A Oxidoreductase, pyridin 92.9 0.14 4.7E-06 41.2 5.2 35 30-65 148-182 (452)
283 2raf_A Putative dinucleotide-b 92.8 0.16 5.6E-06 36.7 5.0 35 29-64 19-53 (209)
284 1f0y_A HCDH, L-3-hydroxyacyl-C 92.8 0.13 4.4E-06 39.2 4.6 32 31-63 17-48 (302)
285 3ado_A Lambda-crystallin; L-gu 92.8 0.13 4.3E-06 40.3 4.6 32 31-63 8-39 (319)
286 3ghy_A Ketopantoate reductase 92.7 0.15 5.2E-06 39.5 4.9 32 30-62 4-35 (335)
287 3s5w_A L-ornithine 5-monooxyge 92.7 0.11 3.9E-06 41.5 4.3 37 29-65 227-264 (463)
288 3ab1_A Ferredoxin--NADP reduct 92.6 0.1 3.6E-06 40.1 3.9 35 30-65 164-198 (360)
289 3f8d_A Thioredoxin reductase ( 92.6 0.16 5.6E-06 37.9 4.9 36 30-66 155-190 (323)
290 4e12_A Diketoreductase; oxidor 92.5 0.15 5E-06 38.6 4.6 32 31-63 6-37 (283)
291 2ew2_A 2-dehydropantoate 2-red 92.5 0.15 5E-06 38.5 4.6 32 31-63 5-36 (316)
292 3dgz_A Thioredoxin reductase 2 92.4 0.17 5.9E-06 41.0 5.2 32 31-63 187-218 (488)
293 1mo9_A ORF3; nucleotide bindin 92.4 0.16 5.6E-06 41.6 5.1 35 30-65 215-249 (523)
294 3ics_A Coenzyme A-disulfide re 92.4 0.16 5.4E-06 42.2 5.0 35 30-65 188-222 (588)
295 1hyu_A AHPF, alkyl hydroperoxi 92.4 0.14 5E-06 42.0 4.7 35 30-65 356-390 (521)
296 1z82_A Glycerol-3-phosphate de 92.3 0.16 5.5E-06 39.2 4.7 34 28-62 13-46 (335)
297 3hwr_A 2-dehydropantoate 2-red 92.2 0.16 5.6E-06 39.1 4.6 34 27-62 17-50 (318)
298 1xdi_A RV3303C-LPDA; reductase 92.0 0.2 6.7E-06 40.8 5.1 35 30-65 183-217 (499)
299 3qfa_A Thioredoxin reductase 1 92.0 0.2 6.7E-06 41.2 5.0 31 31-62 212-242 (519)
300 1txg_A Glycerol-3-phosphate de 91.9 0.19 6.5E-06 38.4 4.6 30 31-61 2-31 (335)
301 4b1b_A TRXR, thioredoxin reduc 91.9 0.21 7.2E-06 41.6 5.2 34 30-64 224-257 (542)
302 2wpf_A Trypanothione reductase 91.8 0.19 6.4E-06 41.1 4.7 36 30-65 192-229 (495)
303 1fec_A Trypanothione reductase 91.7 0.19 6.5E-06 40.9 4.6 36 30-65 188-225 (490)
304 4gx0_A TRKA domain protein; me 91.6 0.25 8.5E-06 40.9 5.3 35 30-65 349-383 (565)
305 1bg6_A N-(1-D-carboxylethyl)-L 91.6 0.22 7.5E-06 38.4 4.7 33 30-63 5-37 (359)
306 1lld_A L-lactate dehydrogenase 91.5 0.22 7.6E-06 38.0 4.6 33 30-63 8-42 (319)
307 3ego_A Probable 2-dehydropanto 91.5 0.23 7.7E-06 38.1 4.6 32 30-63 3-34 (307)
308 3o0h_A Glutathione reductase; 91.4 0.23 8E-06 40.2 4.9 35 30-65 192-226 (484)
309 3r9u_A Thioredoxin reductase; 91.4 0.23 7.9E-06 37.0 4.5 35 30-65 148-182 (315)
310 3dgh_A TRXR-1, thioredoxin red 91.2 0.27 9.3E-06 39.8 5.0 33 30-63 188-220 (483)
311 2y0c_A BCEC, UDP-glucose dehyd 91.2 0.25 8.5E-06 40.5 4.8 34 29-63 8-41 (478)
312 4dna_A Probable glutathione re 91.1 0.27 9.4E-06 39.5 5.0 35 30-65 171-205 (463)
313 3lzw_A Ferredoxin--NADP reduct 91.1 0.21 7.3E-06 37.4 4.1 35 30-65 155-189 (332)
314 2dpo_A L-gulonate 3-dehydrogen 90.9 0.28 9.7E-06 38.1 4.6 32 31-63 8-39 (319)
315 3fbs_A Oxidoreductase; structu 90.8 0.21 7.1E-06 36.9 3.7 33 30-64 142-174 (297)
316 1pzg_A LDH, lactate dehydrogen 90.8 0.42 1.4E-05 37.2 5.6 34 30-64 10-44 (331)
317 2vns_A Metalloreductase steap3 90.7 0.38 1.3E-05 34.8 5.0 33 30-63 29-61 (215)
318 1jay_A Coenzyme F420H2:NADP+ o 90.4 0.35 1.2E-05 34.4 4.6 32 31-63 2-34 (212)
319 3iwa_A FAD-dependent pyridine 90.4 0.3 1E-05 39.3 4.6 36 30-65 160-195 (472)
320 4a9w_A Monooxygenase; baeyer-v 90.3 0.33 1.1E-05 36.7 4.5 32 30-63 164-195 (357)
321 1zcj_A Peroxisomal bifunctiona 90.3 0.29 9.9E-06 39.9 4.4 33 30-63 38-70 (463)
322 2aef_A Calcium-gated potassium 90.2 0.14 4.8E-06 37.4 2.3 33 29-63 9-41 (234)
323 1kyq_A Met8P, siroheme biosynt 90.2 0.24 8.3E-06 37.9 3.7 34 29-63 13-46 (274)
324 3gg2_A Sugar dehydrogenase, UD 90.0 0.35 1.2E-05 39.4 4.6 32 31-63 4-35 (450)
325 3dfz_A SIRC, precorrin-2 dehyd 90.0 0.4 1.4E-05 35.5 4.6 33 29-62 31-63 (223)
326 2ewd_A Lactate dehydrogenase,; 90.0 0.49 1.7E-05 36.4 5.3 33 30-63 5-38 (317)
327 4g6h_A Rotenone-insensitive NA 90.0 0.28 9.7E-06 40.2 4.1 36 30-65 218-266 (502)
328 3k6j_A Protein F01G10.3, confi 89.9 0.35 1.2E-05 39.6 4.6 34 30-64 55-88 (460)
329 3dtt_A NADP oxidoreductase; st 89.9 0.44 1.5E-05 35.2 4.8 35 29-64 19-53 (245)
330 3gpi_A NAD-dependent epimerase 89.9 0.51 1.7E-05 35.0 5.2 33 31-64 5-37 (286)
331 1jw9_B Molybdopterin biosynthe 89.8 0.4 1.4E-05 35.8 4.6 34 29-63 31-65 (249)
332 3k96_A Glycerol-3-phosphate de 89.6 0.38 1.3E-05 37.9 4.5 33 30-63 30-62 (356)
333 1mv8_A GMD, GDP-mannose 6-dehy 89.6 0.32 1.1E-05 39.2 4.1 32 31-63 2-33 (436)
334 2vdc_G Glutamate synthase [NAD 89.4 0.44 1.5E-05 38.6 4.9 36 29-65 264-300 (456)
335 1cjc_A Protein (adrenodoxin re 89.1 0.41 1.4E-05 38.8 4.5 35 30-64 146-200 (460)
336 4a7p_A UDP-glucose dehydrogena 89.1 0.54 1.9E-05 38.3 5.2 36 29-65 8-43 (446)
337 3ius_A Uncharacterized conserv 89.1 0.53 1.8E-05 34.8 4.8 34 30-64 6-39 (286)
338 1zej_A HBD-9, 3-hydroxyacyl-CO 89.1 0.46 1.6E-05 36.6 4.5 33 29-63 12-44 (293)
339 3pef_A 6-phosphogluconate dehy 89.0 0.5 1.7E-05 35.5 4.6 33 31-64 3-35 (287)
340 3g0o_A 3-hydroxyisobutyrate de 88.9 0.49 1.7E-05 36.0 4.6 33 30-63 8-40 (303)
341 3doj_A AT3G25530, dehydrogenas 88.9 0.49 1.7E-05 36.2 4.6 34 30-64 22-55 (310)
342 1evy_A Glycerol-3-phosphate de 88.9 0.28 9.5E-06 38.2 3.2 32 31-63 17-48 (366)
343 2a9f_A Putative malic enzyme ( 88.9 1 3.5E-05 36.3 6.5 37 26-63 185-222 (398)
344 1yj8_A Glycerol-3-phosphate de 88.8 0.43 1.5E-05 37.4 4.3 33 31-64 23-62 (375)
345 1o94_A Tmadh, trimethylamine d 88.8 0.37 1.3E-05 41.4 4.1 33 30-63 529-563 (729)
346 2v6b_A L-LDH, L-lactate dehydr 88.8 0.52 1.8E-05 36.1 4.6 32 31-63 2-35 (304)
347 1yqg_A Pyrroline-5-carboxylate 88.8 0.55 1.9E-05 34.6 4.6 32 31-63 2-34 (263)
348 3g79_A NDP-N-acetyl-D-galactos 88.7 0.47 1.6E-05 39.1 4.5 35 30-64 19-54 (478)
349 4ffl_A PYLC; amino acid, biosy 88.7 0.66 2.3E-05 35.9 5.2 33 31-64 3-35 (363)
350 3ew7_A LMO0794 protein; Q8Y8U8 88.7 0.71 2.4E-05 32.5 5.0 32 31-63 2-34 (221)
351 3oj0_A Glutr, glutamyl-tRNA re 88.6 0.22 7.6E-06 33.5 2.2 34 29-63 21-54 (144)
352 1vl6_A Malate oxidoreductase; 88.6 0.91 3.1E-05 36.4 6.0 36 26-62 189-225 (388)
353 3mog_A Probable 3-hydroxybutyr 88.5 0.51 1.7E-05 38.8 4.6 32 31-63 7-38 (483)
354 3pdu_A 3-hydroxyisobutyrate de 88.5 0.47 1.6E-05 35.7 4.2 33 31-64 3-35 (287)
355 1w4x_A Phenylacetone monooxyge 88.5 0.59 2E-05 38.5 5.0 35 30-65 187-221 (542)
356 1m6i_A Programmed cell death p 88.3 0.55 1.9E-05 38.2 4.8 35 30-64 181-218 (493)
357 3h2s_A Putative NADH-flavin re 88.2 0.7 2.4E-05 32.7 4.8 31 32-63 3-34 (224)
358 3qha_A Putative oxidoreductase 88.2 0.46 1.6E-05 36.1 4.0 35 29-64 15-49 (296)
359 1x0v_A GPD-C, GPDH-C, glycerol 88.2 0.41 1.4E-05 37.0 3.7 34 30-64 9-49 (354)
360 2qyt_A 2-dehydropantoate 2-red 88.2 0.41 1.4E-05 36.2 3.6 32 30-61 9-45 (317)
361 2pv7_A T-protein [includes: ch 88.1 0.62 2.1E-05 35.4 4.6 32 31-63 23-55 (298)
362 1nyt_A Shikimate 5-dehydrogena 88.1 0.63 2.1E-05 35.0 4.6 33 30-63 120-152 (271)
363 2f1k_A Prephenate dehydrogenas 88.1 0.63 2.2E-05 34.6 4.6 32 31-63 2-33 (279)
364 2hjr_A Malate dehydrogenase; m 88.0 0.7 2.4E-05 35.9 5.0 34 30-64 15-49 (328)
365 1hdo_A Biliverdin IX beta redu 87.9 0.77 2.6E-05 31.9 4.7 33 31-64 5-38 (206)
366 1a5z_A L-lactate dehydrogenase 87.8 0.64 2.2E-05 35.9 4.6 32 31-63 2-35 (319)
367 1hyh_A L-hicdh, L-2-hydroxyiso 87.8 0.64 2.2E-05 35.5 4.6 32 31-63 3-36 (309)
368 2rcy_A Pyrroline carboxylate r 87.7 0.89 3E-05 33.4 5.2 34 30-64 5-42 (262)
369 4dio_A NAD(P) transhydrogenase 87.7 0.73 2.5E-05 37.2 5.0 35 29-64 190-224 (405)
370 2h78_A Hibadh, 3-hydroxyisobut 87.7 0.55 1.9E-05 35.5 4.1 32 31-63 5-36 (302)
371 3vtf_A UDP-glucose 6-dehydroge 87.5 0.62 2.1E-05 38.0 4.5 34 29-63 21-54 (444)
372 3c7a_A Octopine dehydrogenase; 87.5 0.45 1.6E-05 37.6 3.7 30 31-60 4-33 (404)
373 2uyy_A N-PAC protein; long-cha 87.5 0.74 2.5E-05 35.0 4.7 34 30-64 31-64 (316)
374 1guz_A Malate dehydrogenase; o 87.4 0.83 2.8E-05 35.0 5.0 34 31-64 2-36 (310)
375 2izz_A Pyrroline-5-carboxylate 87.2 0.85 2.9E-05 35.0 4.9 35 29-64 22-60 (322)
376 2eez_A Alanine dehydrogenase; 87.1 0.79 2.7E-05 36.0 4.8 33 30-63 167-199 (369)
377 3l6d_A Putative oxidoreductase 87.1 0.8 2.7E-05 34.9 4.7 34 29-63 9-42 (306)
378 4dll_A 2-hydroxy-3-oxopropiona 87.1 0.62 2.1E-05 35.8 4.1 33 30-63 32-64 (320)
379 3qsg_A NAD-binding phosphogluc 87.0 0.75 2.6E-05 35.2 4.6 32 30-62 25-57 (312)
380 3e8x_A Putative NAD-dependent 87.0 0.89 3.1E-05 32.7 4.8 35 29-64 21-56 (236)
381 4b4o_A Epimerase family protei 87.0 1.1 3.6E-05 33.5 5.3 33 31-64 2-35 (298)
382 3ojo_A CAP5O; rossmann fold, c 86.9 0.5 1.7E-05 38.3 3.6 34 30-64 12-45 (431)
383 3lk7_A UDP-N-acetylmuramoylala 86.8 0.73 2.5E-05 37.2 4.6 33 30-63 10-42 (451)
384 2p4q_A 6-phosphogluconate dehy 86.8 0.83 2.8E-05 37.6 4.9 35 28-63 9-43 (497)
385 2g5c_A Prephenate dehydrogenas 86.7 0.83 2.8E-05 34.0 4.6 32 31-63 3-36 (281)
386 2gag_A Heterotetrameric sarcos 86.7 0.44 1.5E-05 42.3 3.5 35 30-65 285-319 (965)
387 3c24_A Putative oxidoreductase 86.7 0.78 2.7E-05 34.4 4.4 32 31-63 13-45 (286)
388 4ezb_A Uncharacterized conserv 86.6 0.75 2.6E-05 35.4 4.4 33 30-63 25-58 (317)
389 1gte_A Dihydropyrimidine dehyd 86.6 0.72 2.5E-05 41.2 4.8 32 31-63 334-366 (1025)
390 3p2y_A Alanine dehydrogenase/p 86.5 0.8 2.7E-05 36.6 4.6 35 29-64 184-218 (381)
391 2x5o_A UDP-N-acetylmuramoylala 86.5 0.62 2.1E-05 37.5 3.9 34 31-65 7-40 (439)
392 2gf2_A Hibadh, 3-hydroxyisobut 86.4 0.81 2.8E-05 34.3 4.4 32 31-63 2-33 (296)
393 2zyd_A 6-phosphogluconate dehy 86.4 0.81 2.8E-05 37.5 4.7 34 29-63 15-48 (480)
394 1pjc_A Protein (L-alanine dehy 86.4 0.92 3.2E-05 35.6 4.8 33 30-63 168-200 (361)
395 3vps_A TUNA, NAD-dependent epi 86.4 1 3.5E-05 33.6 4.9 34 30-64 8-42 (321)
396 1vpd_A Tartronate semialdehyde 86.3 0.73 2.5E-05 34.6 4.1 33 30-63 6-38 (299)
397 2wtb_A MFP2, fatty acid multif 86.3 0.71 2.4E-05 39.8 4.4 32 31-63 314-345 (725)
398 4huj_A Uncharacterized protein 86.2 0.43 1.5E-05 34.6 2.7 34 30-64 24-58 (220)
399 1pgj_A 6PGDH, 6-PGDH, 6-phosph 86.1 0.88 3E-05 37.2 4.7 31 31-62 3-33 (478)
400 3ggo_A Prephenate dehydrogenas 85.9 0.93 3.2E-05 34.9 4.6 33 30-63 34-68 (314)
401 4e21_A 6-phosphogluconate dehy 85.9 0.94 3.2E-05 35.7 4.7 34 29-63 22-55 (358)
402 2o3j_A UDP-glucose 6-dehydroge 85.9 0.93 3.2E-05 37.1 4.8 34 30-63 10-44 (481)
403 1lqt_A FPRA; NADP+ derivative, 85.8 0.86 2.9E-05 36.8 4.5 35 30-64 148-202 (456)
404 1i36_A Conserved hypothetical 85.7 0.86 2.9E-05 33.6 4.1 30 31-61 2-31 (264)
405 4g65_A TRK system potassium up 85.6 0.8 2.7E-05 37.3 4.2 34 29-64 235-268 (461)
406 1p77_A Shikimate 5-dehydrogena 85.6 0.74 2.5E-05 34.6 3.8 33 30-63 120-152 (272)
407 1x13_A NAD(P) transhydrogenase 85.5 0.97 3.3E-05 36.1 4.6 35 29-64 172-206 (401)
408 1t2d_A LDH-P, L-lactate dehydr 85.5 1.3 4.4E-05 34.3 5.2 33 30-63 5-38 (322)
409 4id9_A Short-chain dehydrogena 85.5 1.3 4.6E-05 33.5 5.3 35 29-64 19-54 (347)
410 1l7d_A Nicotinamide nucleotide 85.5 1.1 3.9E-05 35.3 5.0 35 29-64 172-206 (384)
411 3cky_A 2-hydroxymethyl glutara 85.4 0.89 3.1E-05 34.1 4.2 33 30-63 5-37 (301)
412 2dkn_A 3-alpha-hydroxysteroid 85.4 1.4 4.7E-05 31.7 5.1 32 32-64 4-36 (255)
413 2pgd_A 6-phosphogluconate dehy 85.3 1.1 3.8E-05 36.6 4.9 33 30-63 3-35 (482)
414 3d1l_A Putative NADP oxidoredu 85.2 1.2 4E-05 32.9 4.7 33 30-63 11-44 (266)
415 4gx0_A TRKA domain protein; me 85.2 0.76 2.6E-05 38.0 4.0 36 28-64 126-161 (565)
416 2vhw_A Alanine dehydrogenase; 85.0 1.2 4E-05 35.3 4.8 34 29-63 168-201 (377)
417 3k30_A Histamine dehydrogenase 84.9 0.84 2.9E-05 38.8 4.2 35 31-66 525-561 (690)
418 2hk9_A Shikimate dehydrogenase 84.8 1.2 4E-05 33.5 4.6 33 30-63 130-162 (275)
419 3phh_A Shikimate dehydrogenase 84.8 1.4 4.8E-05 33.5 5.0 35 29-64 118-152 (269)
420 3tl2_A Malate dehydrogenase; c 84.6 1.2 4.1E-05 34.5 4.6 32 30-62 9-41 (315)
421 3ktd_A Prephenate dehydrogenas 84.6 1.2 4E-05 35.0 4.6 32 31-63 10-41 (341)
422 3d4o_A Dipicolinate synthase s 84.4 1.4 4.7E-05 33.4 4.8 34 29-63 155-188 (293)
423 2egg_A AROE, shikimate 5-dehyd 84.4 1.1 3.9E-05 34.1 4.4 34 29-63 141-175 (297)
424 4gwg_A 6-phosphogluconate dehy 84.3 1.4 4.9E-05 36.2 5.2 35 29-64 4-38 (484)
425 1wdk_A Fatty oxidation complex 84.3 0.84 2.9E-05 39.3 4.0 33 30-63 315-347 (715)
426 2i6t_A Ubiquitin-conjugating e 84.3 1.2 4.2E-05 34.2 4.6 34 29-63 14-49 (303)
427 3ko8_A NAD-dependent epimerase 84.2 1.5 5E-05 32.7 4.9 32 32-64 3-35 (312)
428 2rir_A Dipicolinate synthase, 84.2 1.4 4.8E-05 33.4 4.8 34 29-63 157-190 (300)
429 1ur5_A Malate dehydrogenase; o 84.1 1.3 4.3E-05 34.1 4.6 33 30-63 3-36 (309)
430 3ond_A Adenosylhomocysteinase; 84.1 1.2 4.1E-05 36.8 4.6 34 29-63 265-298 (488)
431 2iz1_A 6-phosphogluconate dehy 84.1 1.4 4.9E-05 35.8 5.1 33 30-63 6-38 (474)
432 2z1m_A GDP-D-mannose dehydrata 84.1 1.5 5.2E-05 33.0 5.0 33 31-64 5-38 (345)
433 1dlj_A UDP-glucose dehydrogena 83.9 1 3.5E-05 35.9 4.1 31 31-63 2-32 (402)
434 1lnq_A MTHK channels, potassiu 83.9 0.53 1.8E-05 36.2 2.3 32 31-64 117-148 (336)
435 3o38_A Short chain dehydrogena 83.8 0.94 3.2E-05 33.3 3.6 33 30-63 23-57 (266)
436 1lu9_A Methylene tetrahydromet 83.7 1.5 5.1E-05 33.0 4.8 32 30-62 120-152 (287)
437 3gt0_A Pyrroline-5-carboxylate 83.6 1.5 5.2E-05 32.1 4.7 32 31-63 4-39 (247)
438 3dqp_A Oxidoreductase YLBE; al 83.5 1.3 4.5E-05 31.4 4.2 33 31-64 2-35 (219)
439 1np3_A Ketol-acid reductoisome 83.1 1.7 5.9E-05 33.6 5.0 32 31-63 18-49 (338)
440 3r6d_A NAD-dependent epimerase 83.0 1.7 5.9E-05 30.8 4.7 32 32-64 8-41 (221)
441 2d5c_A AROE, shikimate 5-dehyd 83.0 1.7 5.7E-05 32.3 4.7 32 31-63 118-149 (263)
442 1pjq_A CYSG, siroheme synthase 83.0 1.4 4.8E-05 35.8 4.6 33 29-62 12-44 (457)
443 3dhn_A NAD-dependent epimerase 82.8 1.2 4E-05 31.7 3.7 33 31-64 6-39 (227)
444 3ruf_A WBGU; rossmann fold, UD 82.8 1.9 6.6E-05 32.7 5.1 34 30-64 26-60 (351)
445 2q3e_A UDP-glucose 6-dehydroge 82.6 1.2 4.2E-05 36.1 4.1 34 30-63 6-40 (467)
446 3tri_A Pyrroline-5-carboxylate 82.5 2.1 7.2E-05 32.2 5.2 34 30-64 4-40 (280)
447 2pzm_A Putative nucleotide sug 82.5 2 6.8E-05 32.5 5.1 33 30-63 21-54 (330)
448 1leh_A Leucine dehydrogenase; 82.4 1.6 5.5E-05 34.6 4.6 34 28-62 172-205 (364)
449 1nvt_A Shikimate 5'-dehydrogen 82.3 1.2 4.2E-05 33.6 3.8 31 30-62 129-159 (287)
450 2ydy_A Methionine adenosyltran 82.1 1.5 5.3E-05 32.7 4.3 31 31-62 4-35 (315)
451 3dfu_A Uncharacterized protein 82.0 0.45 1.6E-05 35.5 1.2 32 30-62 7-38 (232)
452 1n7h_A GDP-D-mannose-4,6-dehyd 82.0 2.1 7.3E-05 32.9 5.2 33 31-64 30-63 (381)
453 3u62_A Shikimate dehydrogenase 81.9 2 7E-05 32.1 4.9 32 31-63 110-142 (253)
454 3q2o_A Phosphoribosylaminoimid 81.9 2.1 7.3E-05 33.4 5.2 35 29-64 14-48 (389)
455 4eez_A Alcohol dehydrogenase 1 81.9 2 7E-05 32.8 5.0 35 30-64 165-199 (348)
456 2x4g_A Nucleoside-diphosphate- 81.7 2.2 7.6E-05 32.1 5.1 33 31-64 15-48 (342)
457 3zwc_A Peroxisomal bifunctiona 81.7 1.5 5E-05 38.1 4.4 34 29-63 316-349 (742)
458 3slg_A PBGP3 protein; structur 81.6 2.4 8.2E-05 32.5 5.3 35 30-64 25-60 (372)
459 1y1p_A ARII, aldehyde reductas 81.5 2 6.9E-05 32.2 4.8 32 30-62 12-44 (342)
460 1eq2_A ADP-L-glycero-D-mannohe 81.5 2.2 7.5E-05 31.6 4.9 32 32-64 2-35 (310)
461 3orq_A N5-carboxyaminoimidazol 81.5 2.3 7.9E-05 33.3 5.2 35 29-64 12-46 (377)
462 2bka_A CC3, TAT-interacting pr 81.5 2.6 8.9E-05 30.1 5.2 33 31-64 20-55 (242)
463 1h6d_A Precursor form of gluco 81.4 1.1 3.8E-05 35.9 3.4 36 27-62 81-118 (433)
464 2cvz_A Dehydrogenase, 3-hydrox 81.3 1.6 5.3E-05 32.4 4.0 31 31-63 3-33 (289)
465 2ahr_A Putative pyrroline carb 81.3 1.6 5.6E-05 32.0 4.1 32 31-63 5-36 (259)
466 3i6i_A Putative leucoanthocyan 81.2 2.3 7.8E-05 32.4 5.0 33 30-63 11-44 (346)
467 1yb4_A Tartronic semialdehyde 81.2 1.2 4.1E-05 33.2 3.4 29 31-60 5-33 (295)
468 3pid_A UDP-glucose 6-dehydroge 81.1 1.6 5.6E-05 35.4 4.3 33 30-64 37-69 (432)
469 4fk1_A Putative thioredoxin re 81.0 2.4 8.1E-05 31.7 5.0 34 31-65 148-182 (304)
470 1oju_A MDH, malate dehydrogena 81.0 2 6.8E-05 32.9 4.6 32 31-63 2-35 (294)
471 1sb8_A WBPP; epimerase, 4-epim 80.8 2.4 8.2E-05 32.2 5.0 32 31-63 29-61 (352)
472 3b1f_A Putative prephenate deh 80.7 2.2 7.4E-05 31.8 4.7 33 30-62 7-40 (290)
473 1qyc_A Phenylcoumaran benzylic 80.7 1.9 6.5E-05 32.0 4.3 32 31-63 6-38 (308)
474 2we8_A Xanthine dehydrogenase; 80.6 3.3 0.00011 33.1 5.9 37 28-65 203-239 (386)
475 3c1o_A Eugenol synthase; pheny 80.6 2.1 7.1E-05 32.1 4.6 32 31-63 6-38 (321)
476 3gvi_A Malate dehydrogenase; N 80.6 2.5 8.6E-05 32.8 5.1 35 29-64 7-42 (324)
477 3rui_A Ubiquitin-like modifier 80.6 2.3 8E-05 33.4 4.9 37 28-64 33-69 (340)
478 3p7m_A Malate dehydrogenase; p 80.5 2.7 9.1E-05 32.6 5.2 35 29-64 5-40 (321)
479 2gas_A Isoflavone reductase; N 80.4 2.1 7.2E-05 31.7 4.5 32 31-63 4-36 (307)
480 2bll_A Protein YFBG; decarboxy 80.4 2.7 9.2E-05 31.6 5.1 33 31-63 2-35 (345)
481 2b69_A UDP-glucuronate decarbo 80.3 2.3 7.9E-05 32.2 4.8 33 30-63 28-61 (343)
482 3pqe_A L-LDH, L-lactate dehydr 80.3 2.2 7.4E-05 33.2 4.6 32 30-62 6-39 (326)
483 3ce6_A Adenosylhomocysteinase; 80.2 2 7E-05 35.4 4.6 34 29-63 274-307 (494)
484 1cyd_A Carbonyl reductase; sho 80.1 2.6 8.8E-05 30.2 4.8 32 31-63 9-41 (244)
485 3tnl_A Shikimate dehydrogenase 80.1 2.4 8.4E-05 32.8 4.8 33 29-62 154-187 (315)
486 1ek6_A UDP-galactose 4-epimera 80.0 2.7 9.4E-05 31.7 5.1 31 31-62 4-35 (348)
487 1gpj_A Glutamyl-tRNA reductase 80.0 2.2 7.4E-05 34.0 4.6 34 29-63 167-201 (404)
488 3aw8_A PURK, phosphoribosylami 79.9 2.3 8E-05 32.8 4.7 32 32-64 2-33 (369)
489 2c20_A UDP-glucose 4-epimerase 79.9 2.9 9.8E-05 31.3 5.1 32 31-63 3-35 (330)
490 2c5a_A GDP-mannose-3', 5'-epim 79.9 2.8 9.6E-05 32.4 5.2 33 31-64 31-64 (379)
491 2dbq_A Glyoxylate reductase; D 79.8 2.7 9.2E-05 32.6 5.0 34 30-64 151-184 (334)
492 1y6j_A L-lactate dehydrogenase 79.7 2.5 8.4E-05 32.6 4.7 34 29-63 7-42 (318)
493 2r6j_A Eugenol synthase 1; phe 79.6 2.5 8.4E-05 31.7 4.7 33 31-64 13-46 (318)
494 2wm3_A NMRA-like family domain 79.5 3.1 0.0001 30.9 5.1 33 31-64 7-41 (299)
495 3jyo_A Quinate/shikimate dehyd 79.5 2.5 8.4E-05 32.2 4.6 34 29-63 127-161 (283)
496 2x6t_A ADP-L-glycero-D-manno-h 79.4 3 0.0001 31.8 5.1 34 30-64 47-82 (357)
497 2axq_A Saccharopine dehydrogen 79.4 1.5 5.2E-05 35.8 3.6 33 30-62 24-56 (467)
498 3don_A Shikimate dehydrogenase 79.4 1.8 6.3E-05 32.8 3.9 35 29-64 117-152 (277)
499 1zud_1 Adenylyltransferase THI 79.3 2.3 7.7E-05 31.6 4.3 34 29-63 28-62 (251)
500 1ff9_A Saccharopine reductase; 79.3 1.8 6.3E-05 35.0 4.1 31 31-62 5-35 (450)
No 1
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=99.92 E-value=1.2e-25 Score=186.34 Aligned_cols=109 Identities=40% Similarity=0.653 Sum_probs=93.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC-CCccCcchhhhcccCccccccccCCCccccccCCCCeee
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP-EASELPGYWFNLLKSRQDWAYRTQPDNRMFFGLENRVNH 105 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~-~~~~~p~~~~~~~~~~~~w~~~~~p~~~~~~~~~~~~~~ 105 (146)
.++|||||||+|++|+++|.||++.++++|||||+|+... .....|..+..+..++++|.|.++||+ ...++.+.
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~----~~~~~~~~ 90 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQA----GTAGRAHH 90 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBG----GGTTBCCE
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccC----CCCCCeEe
Confidence 3489999999999999999999996689999999998653 445677777667778899999999998 67888999
Q ss_pred eccccEEeccccc-cceecCCChhhhhhhhHHHHhhcc
Q psy3408 106 WPRGKGLGGFPAT-GLIYSNHVKTGRIELNLIIACSLD 142 (146)
Q Consensus 106 ~~rG~~lGGsS~i-~~~~~R~~~~df~~~~~~~~~~~~ 142 (146)
++||++|||||+| +|+|+|+.+.||+.| ++..+|
T Consensus 91 ~~rG~~lGGsS~in~~~~~R~~~~Dfd~w---~~~~~~ 125 (526)
T 3t37_A 91 WARGRLIGGSSCLHAMGYMRGHPSDFQAW---VDASGD 125 (526)
T ss_dssp ECCBCBTTGGGGTSCCBCCCCCHHHHHHH---HHHHSC
T ss_pred ccCccEECcHHHHhhCEEecCCHHHHHHH---HHhcCC
Confidence 9999999999999 999999999999665 444443
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.90 E-value=2e-24 Score=182.76 Aligned_cols=117 Identities=26% Similarity=0.321 Sum_probs=94.5
Q ss_pred hccccccccCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC---CCccCcchhhhcccCccccccccCCCcc
Q psy3408 18 VVSTAEDNISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP---EASELPGYWFNLLKSRQDWAYRTQPDNR 94 (146)
Q Consensus 18 ~~~~~~~~~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~---~~~~~p~~~~~~~~~~~~w~~~~~p~~~ 94 (146)
+.........++|||||||+|.+|+++|.||++.++.+|||||+|++.. .....|..+.....+.++|.|.++||.
T Consensus 8 ~~~~~~~~~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~- 86 (583)
T 3qvp_A 8 LLTDPKDVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA- 86 (583)
T ss_dssp SBCCGGGTTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-
T ss_pred hccCHhhcCCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-
Confidence 3444455666789999999999999999999987799999999998432 234555555555577899999999986
Q ss_pred ccccCCCCeeeeccccEEeccccc-cceecCCChhhhhhhhHHHHhhcc
Q psy3408 95 MFFGLENRVNHWPRGKGLGGFPAT-GLIYSNHVKTGRIELNLIIACSLD 142 (146)
Q Consensus 95 ~~~~~~~~~~~~~rG~~lGGsS~i-~~~~~R~~~~df~~~~~~~~~~~~ 142 (146)
..++.+.++|||+|||||.+ +|+|.|+++.||+. |+++.+|
T Consensus 87 ----~~~r~~~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~---W~~~g~~ 128 (583)
T 3qvp_A 87 ----TNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDS---WETVFGN 128 (583)
T ss_dssp ----TTSCCCEECCBCSTTGGGGTSCCBCCCCCHHHHHH---HHHTSCC
T ss_pred ----CCCCeeeccCceecCCcCcccceEEEeCCHHHHHH---HHHhCCC
Confidence 46778899999999999999 99999999999965 5555443
No 3
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=99.90 E-value=3.1e-24 Score=181.11 Aligned_cols=107 Identities=34% Similarity=0.512 Sum_probs=93.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC--CCCccCcchhhhcc-cCccccccccCCCccccccCCCCeee
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP--PEASELPGYWFNLL-KSRQDWAYRTQPDNRMFFGLENRVNH 105 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~--~~~~~~p~~~~~~~-~~~~~w~~~~~p~~~~~~~~~~~~~~ 105 (146)
+|||||||+|.+|+++|.+|++.++++|+|||+|+.. .....+|.....+. .++++|.|.++||+ ..+++.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~----~~~~r~~~ 77 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQA----GYNGRSIA 77 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCG----GGTTCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCC----CCCCceEe
Confidence 6999999999999999999999669999999999875 34567787665554 37899999999998 78899999
Q ss_pred eccccEEeccccc-cceecCCChhhhhhhhHHHHhhcc
Q psy3408 106 WPRGKGLGGFPAT-GLIYSNHVKTGRIELNLIIACSLD 142 (146)
Q Consensus 106 ~~rG~~lGGsS~i-~~~~~R~~~~df~~~~~~~~~~~~ 142 (146)
++|||+|||||.+ +|+|.|+++.||+. |++.+|+
T Consensus 78 ~~rGk~lGGsS~iN~m~~~Rg~~~d~d~---W~~~~G~ 112 (566)
T 3fim_B 78 YPRGRMLGGSSSVHYMVMMRGSTEDFDR---YAAVTGD 112 (566)
T ss_dssp CCCBCBTTGGGGTSCCBCCCCCHHHHHH---HHHHHTC
T ss_pred ccCCcEEcCcccccceEEecCCHHHHHH---HHhcCCC
Confidence 9999999999999 99999999999955 5666554
No 4
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.84 E-value=5.8e-22 Score=167.56 Aligned_cols=100 Identities=35% Similarity=0.509 Sum_probs=83.5
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC---CCCccCcchhhhcccCccccccccCCCccccccCCCCe
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP---PEASELPGYWFNLLKSRQDWAYRTQPDNRMFFGLENRV 103 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~---~~~~~~p~~~~~~~~~~~~w~~~~~p~~~~~~~~~~~~ 103 (146)
.++|||||||+|.||+++|.+|++.++.+|||||+|+.. .....+|..+..+..++++|.|.++.+ ++.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~~~--------~r~ 75 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTTMV--------RRD 75 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEEEE--------EET
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEEEC--------Ccc
Confidence 457999999999999999999999755899999999873 234577877766777889999988722 233
Q ss_pred ee------eccccEEeccccc-cceecCCChhhhhhhh
Q psy3408 104 NH------WPRGKGLGGFPAT-GLIYSNHVKTGRIELN 134 (146)
Q Consensus 104 ~~------~~rG~~lGGsS~i-~~~~~R~~~~df~~~~ 134 (146)
+. ++|||+|||||.+ +|+|.|+++.||+.|.
T Consensus 76 ~~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~ 113 (577)
T 3q9t_A 76 DYERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWE 113 (577)
T ss_dssp TEEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTH
T ss_pred ccccccccccccccccCccccCceEeccCCHHHHHHHH
Confidence 33 9999999999999 9999999999997764
No 5
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=99.83 E-value=7.8e-21 Score=160.73 Aligned_cols=109 Identities=29% Similarity=0.362 Sum_probs=88.4
Q ss_pred cccCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC--CCcc-CcchhhhcccCccccccccCCCccccccCC
Q psy3408 24 DNISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP--EASE-LPGYWFNLLKSRQDWAYRTQPDNRMFFGLE 100 (146)
Q Consensus 24 ~~~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~--~~~~-~p~~~~~~~~~~~~w~~~~~p~~~~~~~~~ 100 (146)
...+.+||+||||+|.+|+++|.+|++.++++|+|||+|.... .... +|..+..+..+..+|.|.++| ...
T Consensus 19 ~~~~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p------~~~ 92 (587)
T 1gpe_A 19 KVAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP------LIN 92 (587)
T ss_dssp GTTTCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC------CTT
T ss_pred ccCcccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc------CCC
Confidence 3335689999999999999999999994499999999998653 2234 676655555567899999887 246
Q ss_pred CCeeeeccccEEeccccc-cceecCCChhhhhhhhHHHHhhc
Q psy3408 101 NRVNHWPRGKGLGGFPAT-GLIYSNHVKTGRIELNLIIACSL 141 (146)
Q Consensus 101 ~~~~~~~rG~~lGGsS~i-~~~~~R~~~~df~~~~~~~~~~~ 141 (146)
++.+.+++|++|||+|+| +|+|+|+++.||+. |++.+|
T Consensus 93 ~~~~~~~rGk~lGGsS~in~~~~~R~~~~D~d~---W~~~~G 131 (587)
T 1gpe_A 93 NRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDS---WEKVFG 131 (587)
T ss_dssp SCCCEECCBCSTTGGGGTSCCEECCCCHHHHHH---HHHTTC
T ss_pred CceeeeeccccccccccccceEEecCCHHHHHH---HHHhcC
Confidence 678999999999999999 99999999999966 455434
No 6
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=99.79 E-value=9.5e-20 Score=152.83 Aligned_cols=104 Identities=36% Similarity=0.517 Sum_probs=86.3
Q ss_pred ccCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCCC--CccCcchhhhcccCccccccccCCCccccccCCCC
Q psy3408 25 NISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPE--ASELPGYWFNLLKSRQDWAYRTQPDNRMFFGLENR 102 (146)
Q Consensus 25 ~~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~~--~~~~p~~~~~~~~~~~~w~~~~~p~~~~~~~~~~~ 102 (146)
.....||+||||+|.+|+++|.+|+++++.+|+|||+|..... ....|..+........+|.|.+.|++ . .++
T Consensus 9 ~~~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~----~-~~~ 83 (546)
T 2jbv_A 9 LSDREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQE----N-GNS 83 (546)
T ss_dssp CCCCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCS----S-SCT
T ss_pred cccCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccC----C-CCc
Confidence 3346899999999999999999999966899999999976532 24555544333455789999999988 4 677
Q ss_pred eeeeccccEEeccccc-cceecCCChhhhhhh
Q psy3408 103 VNHWPRGKGLGGFPAT-GLIYSNHVKTGRIEL 133 (146)
Q Consensus 103 ~~~~~rG~~lGGsS~i-~~~~~R~~~~df~~~ 133 (146)
.+.+++|++|||+|.+ +|+|.|+.+.||+.|
T Consensus 84 ~~~~~rGk~lGGsS~in~~~~~R~~~~d~d~w 115 (546)
T 2jbv_A 84 FMRHARAKVMGGCSSHNSCIAFWAPREDLDEW 115 (546)
T ss_dssp TCEECCBCSTTGGGGTSCCBCCCCCHHHHHHH
T ss_pred eEEeecccccccCccccceEEecCCHHHHHHH
Confidence 8999999999999999 999999999999765
No 7
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=99.77 E-value=4.5e-19 Score=147.45 Aligned_cols=106 Identities=18% Similarity=0.148 Sum_probs=81.1
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCCCCccCcc---hhhhc-ccCccccccccCCCccc------
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPG---YWFNL-LKSRQDWAYRTQPDNRM------ 95 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~~~~~~p~---~~~~~-~~~~~~w~~~~~p~~~~------ 95 (146)
...+||+||||+|++|+++|.+|++. +++|+|||+|..... ..|. +.... .....+|.|.++||+..
T Consensus 8 ~~~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~ 84 (507)
T 1coy_A 8 DGDRVPALVIGSGYGGAVAALRLTQA-GIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFG 84 (507)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCC--CCCccccccccccccccccccccccccccccccccc
Confidence 34589999999999999999999995 999999999976431 2332 11111 13357899999887210
Q ss_pred -----cccC------CCCeeeeccccEEeccccc-cceecCCChhhhhhhh
Q psy3408 96 -----FFGL------ENRVNHWPRGKGLGGFPAT-GLIYSNHVKTGRIELN 134 (146)
Q Consensus 96 -----~~~~------~~~~~~~~rG~~lGGsS~i-~~~~~R~~~~df~~~~ 134 (146)
.... .++.+.+++|++|||+|+| +|+|+|+++.||+.|.
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~ 135 (507)
T 1coy_A 85 INKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL 135 (507)
T ss_dssp CCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC
T ss_pred cccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC
Confidence 0122 5668899999999999999 9999999999998874
No 8
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=99.74 E-value=2e-18 Score=143.40 Aligned_cols=104 Identities=20% Similarity=0.217 Sum_probs=79.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCCC---CccCcchhhhcccCccccccccCCCc-----------
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPE---ASELPGYWFNLLKSRQDWAYRTQPDN----------- 93 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~~---~~~~p~~~~~~~~~~~~w~~~~~p~~----------- 93 (146)
.+||+||||+|++|+++|.+|++. +++|+|||+|..... ....+... .......+|.|.++|++
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~~ 81 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA-GVQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVVN 81 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGGC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCCCCCCCcccccccc-cccCcccccccccccccccccccccccc
Confidence 579999999999999999999995 999999999985431 11222211 11233578999888762
Q ss_pred ---ccccc----CCCCeeeeccccEEeccccc-cceecCCChhhhhhh
Q psy3408 94 ---RMFFG----LENRVNHWPRGKGLGGFPAT-GLIYSNHVKTGRIEL 133 (146)
Q Consensus 94 ---~~~~~----~~~~~~~~~rG~~lGGsS~i-~~~~~R~~~~df~~~ 133 (146)
..+.+ ..++.+.+++|++|||+|.+ +|+|.|+++.||+.|
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w 129 (504)
T 1n4w_A 82 RNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEI 129 (504)
T ss_dssp CBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHH
T ss_pred ccccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHh
Confidence 01111 15667899999999999999 999999999999887
No 9
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=99.73 E-value=1.1e-18 Score=146.11 Aligned_cols=98 Identities=28% Similarity=0.405 Sum_probs=74.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC--CCccCcchhhhcccCccccccccCCCccccccCCCCee
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP--EASELPGYWFNLLKSRQDWAYRTQPDNRMFFGLENRVN 104 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~--~~~~~p~~~~~~~~~~~~w~~~~~p~~~~~~~~~~~~~ 104 (146)
..+|||||||+|.+|+++|.+|++ +.+|+|||+|+... .....|..+..... ..+| |.+.||+ ...++.+
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~-~~~~-~~t~~q~----~~~~~~~ 95 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQ-QEDD-GKTPVER----FVSEDGI 95 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHH-SCCC-SSSSEEE----EECTTSC
T ss_pred cCcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhcc-CCCc-CcCCCcc----ccCCCcc
Confidence 457999999999999999999999 89999999997642 22333332222111 1234 5666765 3455678
Q ss_pred eeccccEEeccccc-cceecCCChhhhhh
Q psy3408 105 HWPRGKGLGGFPAT-GLIYSNHVKTGRIE 132 (146)
Q Consensus 105 ~~~rG~~lGGsS~i-~~~~~R~~~~df~~ 132 (146)
.+++|++|||+|.+ +|+|.|+++.||+.
T Consensus 96 ~~~rg~~lGGsS~in~~~~~R~~~~d~~~ 124 (536)
T 1ju2_A 96 DNVRGRVLGGTSIINAGVYARANTSIYSA 124 (536)
T ss_dssp EEEEECBTTGGGGTSCCEECBCCTTSSTT
T ss_pred eeecceeccccccccCeEEEeCCHHHHhh
Confidence 89999999999999 99999999999975
No 10
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=99.58 E-value=3.3e-15 Score=124.80 Aligned_cols=92 Identities=27% Similarity=0.398 Sum_probs=64.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCCC--C---------------ccCcchhhhcccCcccccccc
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPE--A---------------SELPGYWFNLLKSRQDWAYRT 89 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~~--~---------------~~~p~~~~~~~~~~~~w~~~~ 89 (146)
+.+||+||||+|++|+++|.+|+++ |++|+|||+|+.... . ..+|.+... .|.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~-g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~~~--- 74 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEA-GKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFES------LFT--- 74 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGG------GGT---
T ss_pred CCceeEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccccccccccceeeccchhHHH------hhc---
Confidence 4579999999999999999999996 999999999975421 0 011111000 011
Q ss_pred CCCccccccCCCCeeeeccccEEeccccc-cceecCCChhhhhh
Q psy3408 90 QPDNRMFFGLENRVNHWPRGKGLGGFPAT-GLIYSNHVKTGRIE 132 (146)
Q Consensus 90 ~p~~~~~~~~~~~~~~~~rG~~lGGsS~i-~~~~~R~~~~df~~ 132 (146)
.+.. ........+++|++|||+|.+ +|+|+|+.+.||+.
T Consensus 75 ~~~~----~~~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~ 114 (546)
T 1kdg_A 75 DSNP----FWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSS 114 (546)
T ss_dssp CSCC----TTBCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCG
T ss_pred CCCc----cccccccccccceeecccccccceEEecCChHHhcC
Confidence 1110 000113567899999999999 99999999999987
No 11
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.01 E-value=3.5e-10 Score=82.05 Aligned_cols=37 Identities=24% Similarity=0.332 Sum_probs=33.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+++||+|||+|++|+++|..|+++ |++|+|+|+.+.+
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGS 37 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCC
Confidence 468999999999999999999997 9999999998765
No 12
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.90 E-value=9.8e-10 Score=86.17 Aligned_cols=38 Identities=26% Similarity=0.503 Sum_probs=34.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+++|||+|||+|++|+++|+.|+++ |++|+|||+.+..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~-G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKY-GLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCC
Confidence 4579999999999999999999997 9999999998764
No 13
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.77 E-value=6e-09 Score=80.30 Aligned_cols=39 Identities=21% Similarity=0.314 Sum_probs=32.7
Q ss_pred ccCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 25 NISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 25 ~~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
+.+++||++|||+|++|+++|.+|+++ |++|+|+|++..
T Consensus 2 n~M~~yDVvIIGaGpAGlsAA~~lar~-g~~v~lie~~~~ 40 (304)
T 4fk1_A 2 NAMKYIDCAVIGAGPAGLNASLVLGRA-RKQIALFDNNTN 40 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSCC
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 457789999999999999999999996 999999999743
No 14
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.70 E-value=1.4e-08 Score=82.82 Aligned_cols=41 Identities=20% Similarity=0.351 Sum_probs=36.5
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPE 67 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~~ 67 (146)
++.+|+||||||++|+++|++|+++.|++|+|||+.+..+.
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 34799999999999999999999855999999999988753
No 15
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.63 E-value=4.3e-08 Score=76.40 Aligned_cols=39 Identities=36% Similarity=0.492 Sum_probs=34.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHH-hCCCcEEEEecCCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSE-ELDWRVLLIEAGGDPP 66 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~-~~g~~VlvLE~G~~~~ 66 (146)
.++|++|||+|++|+++|++|++ +.|++|+|+|+++.++
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 35799999999999999999986 3599999999987654
No 16
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.61 E-value=3.9e-08 Score=75.66 Aligned_cols=36 Identities=33% Similarity=0.493 Sum_probs=32.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
..||++|||+|+||+.+|.+|++. |++|+|+|++..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~-g~~V~liE~~~~ 40 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA-NLKTVMIERGIP 40 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEecCCC
Confidence 479999999999999999999996 999999999743
No 17
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.60 E-value=3.1e-08 Score=75.88 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=32.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
+.||++|||+|+||+.+|.+|++. |++|+|+|++.
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~-g~~v~liE~~~ 37 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRS-SLKPVMYEGFM 37 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 469999999999999999999996 99999999975
No 18
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.58 E-value=5.1e-08 Score=75.81 Aligned_cols=36 Identities=31% Similarity=0.518 Sum_probs=33.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|++|||+|++|+++|++|+++ |++|+|||+++.
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~-G~~V~vlE~~~~ 38 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAG-GHEVLVAEAAEG 38 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCC
Confidence 468999999999999999999996 999999999864
No 19
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.55 E-value=6.6e-08 Score=76.08 Aligned_cols=41 Identities=24% Similarity=0.494 Sum_probs=34.7
Q ss_pred ccccCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 23 EDNISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 23 ~~~~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
++..+..+|++|||+|++|+.+|++|+++ |++|+|||++..
T Consensus 11 ~~~~~~~~dvvIIGgG~~Gl~~A~~La~~-G~~V~llE~~~~ 51 (382)
T 1ryi_A 11 IRAMKRHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGTM 51 (382)
T ss_dssp ---CCSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSST
T ss_pred hhccCCCCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCC
Confidence 34455689999999999999999999996 999999999754
No 20
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.54 E-value=7.9e-08 Score=76.72 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=33.9
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..+++|++|||+|++|+++|..|+++ |.+|+|||+.+..
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQS-GIDCDVYEAVKEI 58 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 34579999999999999999999997 9999999998764
No 21
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.52 E-value=1e-07 Score=77.74 Aligned_cols=41 Identities=27% Similarity=0.422 Sum_probs=36.8
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCCC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPE 67 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~~ 67 (146)
.+.++|+||||+|.+|+++|..|+++ |++|+|||+.+..+.
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~-G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGG 48 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCCCCCc
Confidence 34579999999999999999999996 999999999988753
No 22
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.52 E-value=8.4e-08 Score=76.14 Aligned_cols=37 Identities=32% Similarity=0.530 Sum_probs=33.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+.+|++|||+|++|+++|++|+++ |++|+|||++...
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~-G~~V~vlE~~~~~ 39 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAER-GHRVLVLERHTFF 39 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 368999999999999999999996 9999999998653
No 23
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.51 E-value=8.3e-08 Score=75.68 Aligned_cols=37 Identities=27% Similarity=0.529 Sum_probs=34.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+++|++|||+|++|+++|..|+++ |.+|+|||+.+..
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~-G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKY-GLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSST
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCC
Confidence 469999999999999999999996 9999999998754
No 24
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.49 E-value=1.6e-07 Score=75.60 Aligned_cols=37 Identities=24% Similarity=0.403 Sum_probs=34.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~~~ 65 (146)
..+|+||||+|.+|+++|++|+++ |+ +|+|||++...
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~-G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARR-GYTNVTVLDPYPVP 42 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSCSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHc-CCCcEEEEeCCCCC
Confidence 468999999999999999999997 99 99999998764
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.47 E-value=1.6e-07 Score=72.56 Aligned_cols=36 Identities=25% Similarity=0.374 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.+|++|||+|++|+++|..|+++ |.+|+|||+.+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHC-CCcEEEEECCCCC
Confidence 57999999999999999999996 9999999998654
No 26
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.47 E-value=1.2e-07 Score=76.02 Aligned_cols=35 Identities=40% Similarity=0.650 Sum_probs=32.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+|+||||+|++|+++|++|+++ |++|+|||+.+..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-GKKVLLLEGGERL 36 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-CCeEEEEecCCCc
Confidence 7999999999999999999997 9999999997654
No 27
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.45 E-value=1.5e-07 Score=77.75 Aligned_cols=38 Identities=21% Similarity=0.234 Sum_probs=34.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..++|+||||+|.+|+++|.+|+++ |.+|+|||+++..
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~-G~~V~vlEk~~~~ 76 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARA-GADVLVLERTSGW 76 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCC
Confidence 3579999999999999999999996 9999999998765
No 28
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.44 E-value=2.2e-07 Score=72.97 Aligned_cols=35 Identities=17% Similarity=0.291 Sum_probs=32.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
+++|++|||+|.+|+++|++|+++ |++|+|||+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARK-GYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCEEEEEeccC
Confidence 478999999999999999999996 99999999975
No 29
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.43 E-value=1.9e-07 Score=73.44 Aligned_cols=37 Identities=35% Similarity=0.619 Sum_probs=33.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+++|++|||+|++|+.+|++|+++ |++|+|||++...
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~-G~~V~vie~~~~~ 38 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFDPP 38 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCC
Confidence 368999999999999999999996 9999999998643
No 30
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.43 E-value=1.9e-07 Score=74.50 Aligned_cols=37 Identities=30% Similarity=0.588 Sum_probs=33.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+.+|++|||+|++|+++|..|+++ |.+|+|||+.+.+
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~-G~~V~v~E~~~~~ 40 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKS-GFKVKIVEKQKFP 40 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCSS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 368999999999999999999996 9999999998643
No 31
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.42 E-value=1.5e-07 Score=73.78 Aligned_cols=36 Identities=36% Similarity=0.596 Sum_probs=33.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
++|++|||+|++|+.+|++|+++ |++|+|||++...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~-G~~V~vle~~~~~ 37 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA-GLNVLMTDAHMPP 37 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT-TCCEEEECSSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCC
Confidence 68999999999999999999997 9999999998653
No 32
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.42 E-value=2.5e-07 Score=72.81 Aligned_cols=35 Identities=29% Similarity=0.496 Sum_probs=32.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
+++|++|||+|++|+.+|++|+++ |++|+|||++.
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~-G~~V~lle~~~ 38 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKR-GEEVTVIEKRF 38 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 478999999999999999999996 99999999984
No 33
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.40 E-value=2.1e-07 Score=74.25 Aligned_cols=35 Identities=26% Similarity=0.354 Sum_probs=32.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+|+||||+|.+|+++|++|+++ |++|+|||+.+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA-GHEVEVFERLPIT 35 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCceEEEeCCCCC
Confidence 4899999999999999999997 9999999998765
No 34
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.40 E-value=3.3e-07 Score=73.67 Aligned_cols=40 Identities=35% Similarity=0.614 Sum_probs=35.5
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
..++|++|||+|++|+++|.+|++++|++|+|||+.+..+
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIG 44 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 3479999999999999999999995489999999997764
No 35
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.40 E-value=2.3e-07 Score=74.84 Aligned_cols=37 Identities=27% Similarity=0.364 Sum_probs=34.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|++|||+|++|+.+|..|+++ |.+|+|||+++..
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~-G~~V~vlEk~~~~ 39 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGKKI 39 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 468999999999999999999996 9999999998754
No 36
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.40 E-value=2.7e-07 Score=74.92 Aligned_cols=37 Identities=35% Similarity=0.576 Sum_probs=33.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..+|+||||+|++|+.+|..|+++ |.+|+|||+.+..
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~-G~~V~llEk~~~~ 62 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKR-GRRVLVIDHARAP 62 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCC
Confidence 468999999999999999999997 9999999998764
No 37
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.39 E-value=3.4e-07 Score=68.22 Aligned_cols=34 Identities=32% Similarity=0.472 Sum_probs=32.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
++||++|||+|++|+.+|..|++. |.+|+|||+.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~~ 35 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQS 35 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecC
Confidence 468999999999999999999996 9999999997
No 38
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.39 E-value=2.8e-07 Score=72.88 Aligned_cols=37 Identities=35% Similarity=0.466 Sum_probs=34.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHH-hCC-CcEEEEecCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSE-ELD-WRVLLIEAGGD 64 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~-~~g-~~VlvLE~G~~ 64 (146)
..++|++|||+|++|+++|++|++ + | ++|+|||++..
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~-G~~~V~vlE~~~~ 57 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNH-GITNVAVLEKGWL 57 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHH-CCCCEEEECSSST
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhc-CCCcEEEEeCCCC
Confidence 457999999999999999999999 8 8 99999999863
No 39
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.38 E-value=2e-07 Score=76.13 Aligned_cols=36 Identities=33% Similarity=0.458 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
.+|||||+|.+|+++|.+|+++ |++|+|||+.+..+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~-G~~V~VlEa~~~~G 37 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA-GIPVLLLEQRDKPG 37 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT-TCCEEEECCC----
T ss_pred CCEEEECCcHHHHHHHHHHHHC-CCcEEEEccCCCCC
Confidence 3799999999999999999997 99999999987764
No 40
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.37 E-value=3.6e-07 Score=72.39 Aligned_cols=35 Identities=23% Similarity=0.402 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
++|++|||+|++|+.+|..|+++ |.+|+|||+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 58999999999999999999997 999999999764
No 41
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.37 E-value=3.7e-07 Score=70.07 Aligned_cols=38 Identities=34% Similarity=0.530 Sum_probs=34.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|++|||+|++|+.+|..|++.+|.+|+|||+.+..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~ 75 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSP 75 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCC
Confidence 46899999999999999999999438999999998765
No 42
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.36 E-value=3.8e-07 Score=74.47 Aligned_cols=35 Identities=34% Similarity=0.502 Sum_probs=33.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
++||++|||+|++|+.+|.+|++. |++|+|+|+++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH-TCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCEEEEEeCCC
Confidence 579999999999999999999997 99999999986
No 43
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.34 E-value=4.6e-07 Score=74.97 Aligned_cols=41 Identities=22% Similarity=0.318 Sum_probs=36.5
Q ss_pred ccCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 25 NISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 25 ~~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
..+++||+||||+|.+|+++|.+|+++ |++|+|||+++..+
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~-g~~v~~~e~~~~~G 56 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHY-GKKILVLDRNPYYG 56 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSC
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeccCCCC
Confidence 345689999999999999999999996 99999999998764
No 44
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.34 E-value=4.7e-07 Score=72.43 Aligned_cols=37 Identities=27% Similarity=0.394 Sum_probs=33.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCc-EEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWR-VLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~-VlvLE~G~~~ 65 (146)
..+|++|||+|++|+++|..|+++ |.+ |+|||+.+..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQA-GIGKVTLLESSSEI 40 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCCCc
Confidence 468999999999999999999996 999 9999998654
No 45
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.34 E-value=4e-07 Score=76.40 Aligned_cols=37 Identities=24% Similarity=0.392 Sum_probs=33.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
+..||+||||+|++|+.+|..|+++ |.+|+|||+++.
T Consensus 16 ~~~~DVvVIGgGi~Gl~~A~~La~~-G~~V~LlEk~d~ 52 (561)
T 3da1_A 16 EKQLDLLVIGGGITGAGIALDAQVR-GIQTGLVEMNDF 52 (561)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSST
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCcEEEEECCCC
Confidence 3579999999999999999999996 999999999854
No 46
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.34 E-value=4.5e-07 Score=76.33 Aligned_cols=38 Identities=32% Similarity=0.505 Sum_probs=32.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.+.+||+|||+|++|+++|..|+++ |.+|+|||+.+..
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~-G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAG-GVGALVLEKLVEP 84 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHT-TCCEEEEBSCSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEcCCCCC
Confidence 3578999999999999999999997 9999999998664
No 47
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.34 E-value=3.6e-07 Score=71.46 Aligned_cols=37 Identities=32% Similarity=0.545 Sum_probs=33.2
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+..+|++|||+|.+|+++|++|+ + |++|+|||+++..
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~-G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-A-HGRVVVLEREAQP 43 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-T-TSCEEEECSSSST
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-C-CCCEEEEECCCCc
Confidence 34789999999999999999999 5 9999999998654
No 48
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.33 E-value=4.5e-07 Score=72.62 Aligned_cols=36 Identities=17% Similarity=0.346 Sum_probs=32.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
.|+||||+|++|+++|++|+++ |++|+|||+.+..+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~G 36 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARN-GHEIIVLEKSAMIG 36 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCC
Confidence 3899999999999999999996 99999999987653
No 49
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.33 E-value=4.8e-07 Score=71.59 Aligned_cols=38 Identities=29% Similarity=0.394 Sum_probs=33.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+..+|++|||+|++|+.+|..|+++ |.+|+|+|+.+..
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE~~~~~ 46 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQN-GWDVRLHEKSSEL 46 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCCEEEEecCCCC
Confidence 3468999999999999999999996 9999999998665
No 50
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.33 E-value=5.4e-07 Score=73.27 Aligned_cols=37 Identities=35% Similarity=0.618 Sum_probs=33.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+++|+||||+|++|+.+|..|+++ |.+|+|||+.+..
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~-G~~V~llEk~~~~ 61 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEE-GANVLLLDKGNKL 61 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCCEEEEECCCCC
Confidence 468999999999999999999996 9999999998754
No 51
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.33 E-value=3.1e-07 Score=73.93 Aligned_cols=37 Identities=30% Similarity=0.392 Sum_probs=33.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCC------CcEEEEecCCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELD------WRVLLIEAGGDPP 66 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g------~~VlvLE~G~~~~ 66 (146)
.+|++|||+|++|+++|++|+++ | ++|+|||+.+..+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-IKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-ccccCCCCCEEEEECCCCCC
Confidence 58999999999999999999997 7 9999999986653
No 52
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.32 E-value=5.4e-07 Score=73.98 Aligned_cols=38 Identities=24% Similarity=0.413 Sum_probs=32.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+++||++|||+|++|+.+|.+|++. |++|+|+|+.+..
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~~ 60 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQL-GMKVAVVEKRSTY 60 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCC
Confidence 4579999999999999999999996 9999999987654
No 53
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.32 E-value=5.3e-07 Score=71.61 Aligned_cols=37 Identities=32% Similarity=0.518 Sum_probs=33.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+.+|..|+++ |.+|+|+|+.+..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~V~viE~~~~~ 41 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQ-GHRVVVVEQARRE 41 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCCC
Confidence 368999999999999999999996 9999999998654
No 54
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.32 E-value=2.8e-07 Score=74.91 Aligned_cols=36 Identities=36% Similarity=0.604 Sum_probs=33.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
+++|++|||+|++|+.+|..|+++ |.+|+|||+.+.
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~-G~~V~vlE~~~~ 40 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRR-GLKILLVDSKPW 40 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSS-SCCEEEECSSCG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCC
Confidence 368999999999999999999996 999999999865
No 55
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.32 E-value=6.4e-07 Score=74.08 Aligned_cols=40 Identities=28% Similarity=0.374 Sum_probs=35.1
Q ss_pred ccCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 25 NISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 25 ~~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
...+.+||+|||+|++|+++|..|+++ |.+|+|||+.+..
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLA-GVEVVVLERLVER 46 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCCC-
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCC
Confidence 445689999999999999999999996 9999999998664
No 56
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.31 E-value=6.2e-07 Score=71.44 Aligned_cols=37 Identities=27% Similarity=0.453 Sum_probs=33.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+.+|..|+++ |.+|+|+|+.+..
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYERDNDR 61 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSSST
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCc
Confidence 468999999999999999999996 9999999998643
No 57
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.31 E-value=6.9e-07 Score=71.41 Aligned_cols=38 Identities=18% Similarity=0.247 Sum_probs=34.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCC-CcEEEEecCCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELD-WRVLLIEAGGDPP 66 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g-~~VlvLE~G~~~~ 66 (146)
+.+|++|||+|++|+++|.+|+++ | ++|+|+|+.+..+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-GFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEECCCCCC
Confidence 468999999999999999999996 8 9999999987653
No 58
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.31 E-value=5.4e-07 Score=74.32 Aligned_cols=36 Identities=33% Similarity=0.498 Sum_probs=32.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
+.+|++|||+|++|+.+|+.|+++ |++|+|||+++.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~-G~~V~llE~~~~ 37 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGR-GLSVLMLEAQDL 37 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCEEEEECCCC
Confidence 468999999999999999999996 999999999753
No 59
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.30 E-value=7.2e-07 Score=71.01 Aligned_cols=38 Identities=42% Similarity=0.600 Sum_probs=34.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~ 65 (146)
.+||++|||+|++|+.+|.+|+++ +|++|+|||++...
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~ 116 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAP 116 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCcc
Confidence 368999999999999999999995 59999999998765
No 60
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.30 E-value=7.5e-07 Score=76.25 Aligned_cols=37 Identities=32% Similarity=0.337 Sum_probs=33.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..+|+||||+|.+|+++|++|+++ |++|+|||++...
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR-GAVVTLYCADAQP 299 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT-TCCEEEEESSSST
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCcEEEEeCCCcc
Confidence 358999999999999999999996 9999999997543
No 61
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.30 E-value=7.1e-07 Score=67.38 Aligned_cols=35 Identities=43% Similarity=0.671 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.+|++|||+|++|+.+|..|++. |++|+|+|+++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA-RKNILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCc
Confidence 58999999999999999999996 999999998653
No 62
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.30 E-value=4.7e-07 Score=74.70 Aligned_cols=38 Identities=32% Similarity=0.400 Sum_probs=34.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCC-CcEEEEecCCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELD-WRVLLIEAGGDPP 66 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g-~~VlvLE~G~~~~ 66 (146)
..+|++|||+|++|+++|.+|+++ | ++|+|||+.+..+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~-G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN-GIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT-TCCSEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCCCCC
Confidence 468999999999999999999996 8 9999999988764
No 63
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.30 E-value=6.3e-07 Score=71.29 Aligned_cols=37 Identities=43% Similarity=0.609 Sum_probs=33.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
.+|++|||+|++|+++|.+|+++ |++|+|+|+++..+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNHIG 37 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCcEEEEecCCCCC
Confidence 37999999999999999999997 99999999987654
No 64
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.30 E-value=5.8e-07 Score=74.08 Aligned_cols=38 Identities=32% Similarity=0.525 Sum_probs=34.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
+.+|+||||+|.+|+++|.+|+++ |++|+|||+.+..+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~G 40 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRVG 40 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSB
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCC
Confidence 468999999999999999999996 99999999987763
No 65
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.30 E-value=7.5e-07 Score=72.10 Aligned_cols=40 Identities=43% Similarity=0.645 Sum_probs=35.8
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
....+|++|||+|++|+++|.+|+++ |++|+|||+.+..+
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASS-GQRVLIVDRRPHIG 65 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHC-CCceEEEeccCCCC
Confidence 34579999999999999999999996 99999999987654
No 66
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.29 E-value=4.9e-07 Score=69.50 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=32.8
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+.+|++|||+|++|+.+|.+|+++ |++|+|+|+.+
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~vie~~~ 55 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARA-EIKPILYEGMM 55 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSS
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 34579999999999999999999997 99999999954
No 67
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.28 E-value=5.6e-07 Score=73.01 Aligned_cols=39 Identities=23% Similarity=0.431 Sum_probs=33.5
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
...+|++|||+|++|+++|..|+++ |++|+|||+.+..+
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~-g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARLG 52 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTT-TCCEEEECSSSSSB
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCC
Confidence 3468999999999999999999996 99999999987653
No 68
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.28 E-value=6.8e-07 Score=69.00 Aligned_cols=37 Identities=22% Similarity=0.518 Sum_probs=33.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+.+|..|++. |++|+|+|+.+..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie~~~~~ 38 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRS-GLSYVILDAEASP 38 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHS-SCCEEEECCSSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCC
Confidence 468999999999999999999996 9999999998653
No 69
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.28 E-value=7.3e-07 Score=75.43 Aligned_cols=38 Identities=29% Similarity=0.409 Sum_probs=34.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
++.+|++|||+|++|+++|..|+++ |.+|+|||+.+..
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~-G~~V~LiEr~~~~ 58 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKL-GHDVTIYERSAFP 58 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcC-CCCEEEEcCCCCC
Confidence 4479999999999999999999996 9999999998654
No 70
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.28 E-value=7.7e-07 Score=72.99 Aligned_cols=33 Identities=30% Similarity=0.438 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
+||++|||+|++|+.+|.+|++. |++|+|||++
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL-GKRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-cCEEEEEeCC
Confidence 69999999999999999999996 9999999994
No 71
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.28 E-value=7.2e-07 Score=74.71 Aligned_cols=38 Identities=29% Similarity=0.390 Sum_probs=34.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..++||||||+|++|+.+|..|+++ |.+|+|||+.+..
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~-G~~V~vlEk~~~~ 161 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDS-GAKVILIEKEPVI 161 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCC
Confidence 3478999999999999999999996 9999999998765
No 72
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.27 E-value=5.7e-07 Score=72.56 Aligned_cols=34 Identities=35% Similarity=0.608 Sum_probs=31.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCC-CcEEEEecC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELD-WRVLLIEAG 62 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g-~~VlvLE~G 62 (146)
.++|+||||+|.+|+.+|++|+++ | ++|+|||+.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~-G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVW-SGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH-HCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEccC
Confidence 579999999999999999999997 8 999999993
No 73
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.27 E-value=6.8e-07 Score=72.02 Aligned_cols=38 Identities=32% Similarity=0.358 Sum_probs=34.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
.++|++|||+|++|+++|.+|+++ |++|+|||+.+..+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-GLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCC
Confidence 468999999999999999999996 99999999987654
No 74
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.27 E-value=8.4e-07 Score=73.35 Aligned_cols=40 Identities=28% Similarity=0.375 Sum_probs=34.4
Q ss_pred ccCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 25 NISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 25 ~~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.....+||+|||+|++|+++|..|+++ |.+|+|||+.+..
T Consensus 8 ~~~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 8 HHRSDASVIVVGAGPAGLMLAGELRLG-GVDVMVLEQLPQR 47 (499)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCSSC
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCC
Confidence 345689999999999999999999996 9999999998654
No 75
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.27 E-value=7.1e-07 Score=74.72 Aligned_cols=38 Identities=24% Similarity=0.296 Sum_probs=34.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..++|+||||+|++|+.+|..|+++ |.+|+|||+.+..
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~-G~~V~vlEk~~~~ 156 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKA-GANVILVDKAPFS 156 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCC
Confidence 3578999999999999999999997 9999999998765
No 76
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.27 E-value=9.8e-07 Score=75.27 Aligned_cols=36 Identities=39% Similarity=0.585 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.+|+||||+|.+|+++|++|+++ |++|+|||+....
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRR-GWQVTLYCADEAP 307 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCcc
Confidence 48999999999999999999996 9999999996543
No 77
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.27 E-value=8.2e-07 Score=70.71 Aligned_cols=36 Identities=22% Similarity=0.211 Sum_probs=33.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
..+|++|||+|++|+.+|..|+++ |.+|+|+|+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-GVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCC
Confidence 468999999999999999999996 999999999865
No 78
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.26 E-value=7.6e-07 Score=72.70 Aligned_cols=37 Identities=32% Similarity=0.595 Sum_probs=33.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.+||++|||+|++|+.+|.+|++. |++|+|+|+.+..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~-G~~V~liEk~~~~ 39 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA-KYNVLMADPKGEL 39 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECTTSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCC
Confidence 469999999999999999999996 9999999976654
No 79
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.26 E-value=6.3e-07 Score=74.07 Aligned_cols=37 Identities=41% Similarity=0.714 Sum_probs=33.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|++|||+|++|+.+|..|+++ |++|+|||+.+..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liE~~~~~ 42 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMR-GHRVLLLEREAFP 42 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC-CCCEEEEccCCCC
Confidence 468999999999999999999996 9999999998743
No 80
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.26 E-value=9.7e-07 Score=67.29 Aligned_cols=34 Identities=35% Similarity=0.317 Sum_probs=32.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
+.+|++|||+|++|+.+|.+|++. |++|+|+|+.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 47 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARY-MLKTLVIGET 47 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred CccCEEEECccHHHHHHHHHHHHC-CCcEEEEecc
Confidence 478999999999999999999996 9999999996
No 81
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.25 E-value=6.5e-07 Score=72.52 Aligned_cols=37 Identities=24% Similarity=0.429 Sum_probs=33.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCC--cEEEEecCCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDW--RVLLIEAGGDPP 66 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G~~~~ 66 (146)
.+|++|||+|.+|+++|++|+++ |+ +|+|||+.+..+
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~-G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRA-PCPPKVVLVESSERLG 40 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTS-SSCCEEEEECSSSSSB
T ss_pred CceEEEECCcHHHHHHHHHHHhC-CCCCcEEEEeCCCCCC
Confidence 36999999999999999999996 88 999999987653
No 82
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.25 E-value=1e-06 Score=71.83 Aligned_cols=39 Identities=31% Similarity=0.595 Sum_probs=35.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
...+|++|||+|++|+++|++|+++ |++|+|+|+.+..+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~G 47 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKA-GYKVTVLEARTRPG 47 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeccCCCC
Confidence 3478999999999999999999996 99999999987764
No 83
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.25 E-value=1.1e-06 Score=67.73 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=33.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+.+|..|++. |++|+|+|+.+..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~ 40 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMR-GLSFRFVDPLPEP 40 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 468999999999999999999996 9999999998654
No 84
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.25 E-value=9.2e-07 Score=73.25 Aligned_cols=37 Identities=30% Similarity=0.417 Sum_probs=34.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|++|||+|++|+++|..|+++ |.+|+|||+.+..
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~-G~~v~viEr~~~~ 40 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ-GVRVLVVERRPGL 40 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSSSC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCC
Confidence 468999999999999999999997 9999999998754
No 85
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.25 E-value=1.1e-06 Score=68.85 Aligned_cols=39 Identities=23% Similarity=0.287 Sum_probs=33.8
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.+..+|++|||+|++|+.+|..|++. |++|+|||+.+..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~ 49 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMN-NISCRIIESMPQL 49 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCCC
Confidence 34579999999999999999999996 9999999998654
No 86
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.24 E-value=8.4e-07 Score=74.89 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=33.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|+||||+|.+|+.+|.+|+++ |.+|+|||+...
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~-G~~V~vlEK~~~ 41 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQS-GQTCALLSKVFP 41 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCC
Confidence 478999999999999999999996 999999999864
No 87
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.24 E-value=8e-07 Score=74.89 Aligned_cols=38 Identities=39% Similarity=0.540 Sum_probs=33.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHh---C--CCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEE---L--DWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~---~--g~~VlvLE~G~~~ 65 (146)
+++|+||||+|++|+++|.+|++. + |.+|+|||+++..
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~ 76 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHI 76 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSST
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCC
Confidence 368999999999999999999984 1 8999999998764
No 88
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.23 E-value=9.3e-07 Score=72.26 Aligned_cols=36 Identities=31% Similarity=0.600 Sum_probs=33.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
+.+||++|||+|++|+.+|.+|++. |++|+|+|+..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~-G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAEL-GARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecCC
Confidence 4579999999999999999999996 99999999874
No 89
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.23 E-value=1.1e-06 Score=67.66 Aligned_cols=36 Identities=28% Similarity=0.484 Sum_probs=32.5
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
+...+|++|||+|++|+.+|..|++. |++|+|+|+.
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 48 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARS-GFSVAILDKA 48 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeCC
Confidence 34579999999999999999999996 9999999995
No 90
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.23 E-value=9.2e-07 Score=74.33 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=33.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
..+|++|||+|++|+.+|..|++. |.+|+|||+++.
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~-G~kV~VlEr~~~ 141 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQM-GFNPIIVERGKE 141 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHT-TCCCEEECSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCeEEEEEccCc
Confidence 358999999999999999999996 999999999964
No 91
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.23 E-value=9.7e-07 Score=72.15 Aligned_cols=40 Identities=25% Similarity=0.344 Sum_probs=34.5
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
+.+.+|++|||+|++|+++|..|+++ |++|+|+|+.+..+
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~G 49 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIH-GLNVTVFEAEGKAG 49 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTT-SCEEEEECSSSSSC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEeCCCCC
Confidence 34578999999999999999999996 99999999987764
No 92
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.22 E-value=1.1e-06 Score=71.67 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=31.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
.+||++|||+|++|+.+|.+|++. |++|+|||++
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~-G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAAL-GKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 369999999999999999999996 9999999994
No 93
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.22 E-value=1.2e-06 Score=67.23 Aligned_cols=37 Identities=27% Similarity=0.302 Sum_probs=33.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+.+|..|++. |++|+|+|+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~ 42 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMR-QASVKIIESLPQL 42 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCC
Confidence 358999999999999999999996 9999999998754
No 94
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.22 E-value=1.2e-06 Score=67.47 Aligned_cols=35 Identities=31% Similarity=0.608 Sum_probs=32.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
...+|++|||+|++|+.+|.+|++. |++|+|+|+.
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 40 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRA-QLSTLILEKG 40 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHc-CCcEEEEeCC
Confidence 3478999999999999999999996 9999999998
No 95
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.22 E-value=1.6e-06 Score=70.36 Aligned_cols=39 Identities=21% Similarity=0.351 Sum_probs=35.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
...+|++|||+|.+|+++|..|+++ |++|+|+|+.+..+
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPYYG 42 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCcc
Confidence 4578999999999999999999996 99999999987764
No 96
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.22 E-value=1.1e-06 Score=73.79 Aligned_cols=36 Identities=31% Similarity=0.455 Sum_probs=33.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
..+|++|||+|.+|+.+|+.|+++ |.+|+|||+++.
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~r-G~~V~LlE~~~~ 66 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAAS-GIKTGLIEMQDF 66 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCC
Confidence 469999999999999999999997 999999999854
No 97
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.22 E-value=1.2e-06 Score=71.58 Aligned_cols=37 Identities=30% Similarity=0.565 Sum_probs=33.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
++|++|||+|++|+++|.+|+++ |++|+|||+.+..+
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~G 75 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVA-GFKTLLLEARDRIG 75 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSBSB
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCCEEEEeCCCCCC
Confidence 38999999999999999999996 99999999987653
No 98
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.21 E-value=9.2e-07 Score=71.56 Aligned_cols=35 Identities=31% Similarity=0.265 Sum_probs=31.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
+.+|++|||+|++|+++|..|+++ |++|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQH-DVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHT-TCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 458999999999999999999997 99999999976
No 99
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.21 E-value=1.1e-06 Score=71.19 Aligned_cols=37 Identities=30% Similarity=0.396 Sum_probs=33.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCC--CcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELD--WRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g--~~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+++|++|+++ | ++|+|||+.+..
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~-g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERA-FPDLNITLLEAGERL 41 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHH-CTTSEEEEECSSSSS
T ss_pred CcccEEEECCCHHHHHHHHHHHHh-CCCCCEEEEECCCCC
Confidence 468999999999999999999997 8 999999997664
No 100
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.21 E-value=9.3e-07 Score=68.91 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=32.1
Q ss_pred ccEEEECCCHHHHHHHHHHHH---hCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSE---ELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~---~~g~~VlvLE~G~~~ 65 (146)
+|++|||+|++|+++|+.|++ . |++|+|+|+++..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-PLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-CEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-CceEEEEECCCCC
Confidence 599999999999999999999 6 9999999998654
No 101
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.21 E-value=1.4e-06 Score=71.44 Aligned_cols=35 Identities=34% Similarity=0.481 Sum_probs=32.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
..+||++|||+|++|+.+|.+|++. |++|+|+|++
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~-G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLN-GARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCEEEEEEec
Confidence 4579999999999999999999996 9999999953
No 102
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.20 E-value=1e-06 Score=68.81 Aligned_cols=34 Identities=15% Similarity=0.211 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCC------CcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELD------WRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g------~~VlvLE~G~~ 64 (146)
.|++|||+|.+|+++|++|+++ | ++|+|||++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCCC
Confidence 3899999999999999999997 5 99999999853
No 103
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.19 E-value=1.2e-06 Score=70.21 Aligned_cols=37 Identities=35% Similarity=0.569 Sum_probs=32.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~ 64 (146)
..+|++|||+|++|+.+|+.|+++ +|++|+|||++..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 359999999999999999999993 3899999999754
No 104
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.19 E-value=1.4e-06 Score=68.53 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.+|+|||+|++|+++|..|+++ |++|+|+||.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~-G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH-GIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCEEEEecCCCC
Confidence 3699999999999999999997 9999999997654
No 105
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.19 E-value=1.5e-06 Score=67.85 Aligned_cols=35 Identities=29% Similarity=0.474 Sum_probs=32.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~ 63 (146)
.++|++|||+|++|+.+|.+|++. |+ +|+|||+.+
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~-g~~~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDF-GITDVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHc-CCCcEEEEecCC
Confidence 468999999999999999999996 88 999999986
No 106
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.19 E-value=1.2e-06 Score=74.55 Aligned_cols=37 Identities=30% Similarity=0.359 Sum_probs=33.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
...+|+||||+|.+|+.+|.+|+++ |.+|+|||+...
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~~-G~~V~vlEK~~~ 52 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSEA-GFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCG
T ss_pred cccCCEEEECccHHHHHHHHHHHHC-CCcEEEEeccCC
Confidence 4578999999999999999999996 999999999754
No 107
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.18 E-value=1.8e-06 Score=71.58 Aligned_cols=36 Identities=31% Similarity=0.529 Sum_probs=33.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+||++|||+|++|+.+|.+|++. |++|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~-G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQY-GKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeccC
Confidence 4579999999999999999999996 99999999954
No 108
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.18 E-value=1.5e-06 Score=72.58 Aligned_cols=37 Identities=30% Similarity=0.452 Sum_probs=33.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..+||+|||+|++|+++|..|++. |.+|+|||+.+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~-G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR-QVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCC
Confidence 368999999999999999999996 9999999998654
No 109
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.17 E-value=1.4e-06 Score=71.66 Aligned_cols=34 Identities=32% Similarity=0.484 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
+||++|||+|++|+.+|.+|++. |++|+|+|++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~-G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH-TDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-CSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 59999999999999999999996 99999999975
No 110
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.17 E-value=2.1e-06 Score=60.91 Aligned_cols=34 Identities=35% Similarity=0.672 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
||++|||+|++|+.+|..|++. |.+|+|+|+++.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie~~~~ 35 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-GLKVLVLDGGRS 35 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSCC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCC
Confidence 7999999999999999999996 999999999864
No 111
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.17 E-value=1.7e-06 Score=73.56 Aligned_cols=38 Identities=29% Similarity=0.538 Sum_probs=34.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
..||+||||+|++|+.+|..|++. |++|+|||+++..+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~-G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGA-GYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhC-CCcEEEEeccCCCC
Confidence 469999999999999999999996 99999999987654
No 112
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.16 E-value=1.8e-06 Score=73.94 Aligned_cols=35 Identities=34% Similarity=0.488 Sum_probs=32.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+||+||||+|++|+.+|..|++. |.+|+|||++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM-GQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhC-CCCEEEEeecc
Confidence 479999999999999999999996 99999999974
No 113
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.16 E-value=2e-06 Score=70.03 Aligned_cols=36 Identities=22% Similarity=0.502 Sum_probs=33.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+||++|||+|++|+.+|.+|++. |++|+|+|+.+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-GMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCc
Confidence 68999999999999999999996 9999999998654
No 114
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.16 E-value=1.9e-06 Score=71.49 Aligned_cols=37 Identities=35% Similarity=0.517 Sum_probs=33.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHH---hCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSE---ELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~---~~g~~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+++|..|++ . |.+|+|||+....
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~~~ 43 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQ-QANITLIESAAIP 43 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCS-SCEEEEEECSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCC-CCEEEEECCCCCC
Confidence 46899999999999999999999 6 9999999996543
No 115
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.16 E-value=2.1e-06 Score=69.00 Aligned_cols=38 Identities=29% Similarity=0.400 Sum_probs=34.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC-CCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG-GDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G-~~~ 65 (146)
...+|++|||+|++|+++|++|+++ |++|+|+|+. +..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-GHDVTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-SCEEEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-CCcEEEEecccccc
Confidence 3468999999999999999999997 9999999998 654
No 116
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.15 E-value=1.7e-06 Score=70.99 Aligned_cols=35 Identities=26% Similarity=0.483 Sum_probs=32.2
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
..+||++|||+|++|+.+|.+|++. |++|+|+|+.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~-G~~V~liEk~ 38 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQL-GKKVAVADYV 38 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEEec
Confidence 3579999999999999999999996 9999999973
No 117
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.15 E-value=2.1e-06 Score=70.35 Aligned_cols=38 Identities=24% Similarity=0.472 Sum_probs=33.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..++|++|||+|++|..+|.+|++. |++|+|+|+.+..
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~~~ 41 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCC
Confidence 3479999999999999999999996 9999999996543
No 118
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.14 E-value=2.8e-06 Score=69.13 Aligned_cols=37 Identities=30% Similarity=0.500 Sum_probs=34.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|++|||+|++|+.+|.+|++. |++|+|+|+.+..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~-g~~V~liE~~~~~ 41 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCc
Confidence 479999999999999999999997 9999999998654
No 119
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.14 E-value=2.6e-06 Score=70.91 Aligned_cols=38 Identities=34% Similarity=0.497 Sum_probs=34.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..++|++|||+|++|+.+|.+|++. |.+|+|+|+++..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~ 51 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAGDV 51 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 4479999999999999999999996 9999999998653
No 120
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.13 E-value=1.8e-06 Score=65.62 Aligned_cols=35 Identities=26% Similarity=0.466 Sum_probs=32.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEE-EecC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLL-IEAG 62 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~Vlv-LE~G 62 (146)
+..+|++|||+|++|+.+|..|+++ |++|+| +|+.
T Consensus 2 ~~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~li~e~~ 37 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAGLSAGLYATRG-GLKNVVMFEKG 37 (315)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHH-TCSCEEEECSS
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCC
Confidence 3578999999999999999999997 999999 9994
No 121
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.13 E-value=1.4e-06 Score=71.57 Aligned_cols=35 Identities=37% Similarity=0.541 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHH---hCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSE---ELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~---~~g~~VlvLE~G~~ 64 (146)
.+|+||||+|++|+++|..|++ . |.+|+|||+...
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~-G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDD-RIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGG-GSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCC-CCEEEEEecCCC
Confidence 4799999999999999999999 7 999999999754
No 122
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.13 E-value=1.8e-06 Score=73.95 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=33.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|+||||+|.+|+.+|.+|+++ |.+|+|||+...
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~-G~~V~vlEK~~~ 39 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQK-GLSTIVLSLIPV 39 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCG
T ss_pred ccccEEEECchHHHHHHHHHHHHC-CCcEEEEeccCC
Confidence 368999999999999999999996 999999999764
No 123
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.13 E-value=2.8e-06 Score=70.22 Aligned_cols=38 Identities=26% Similarity=0.277 Sum_probs=34.5
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
...+|++|||+|++|+.+|..|++. |.+|+|||+.+..
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liEk~~~~ 127 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL-GARVVLVEKRIKF 127 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCSSC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC-CCeEEEEEecccc
Confidence 4578999999999999999999996 9999999998654
No 124
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.13 E-value=2e-06 Score=70.21 Aligned_cols=37 Identities=30% Similarity=0.502 Sum_probs=33.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|++|||+|++|+.+|.+|++. |++|+|+|+.+..
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCc
Confidence 468999999999999999999996 9999999996543
No 125
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.13 E-value=2.4e-06 Score=70.43 Aligned_cols=34 Identities=35% Similarity=0.676 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
+||++|||+|++|+.+|.+|++. |++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH-NAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 58999999999999999999996 99999999985
No 126
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.12 E-value=2.5e-06 Score=69.60 Aligned_cols=37 Identities=22% Similarity=0.339 Sum_probs=33.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|++|||+|++|+.+|.+|++. |++|+|+|+.+..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQL-GFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCc
Confidence 479999999999999999999996 9999999998654
No 127
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.12 E-value=2.3e-06 Score=73.04 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=32.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+||+||||+|++|+.+|..|++. |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~-G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM-GAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCCEEEEEecc
Confidence 469999999999999999999996 99999999974
No 128
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.12 E-value=2.7e-06 Score=69.12 Aligned_cols=36 Identities=25% Similarity=0.446 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+||++|||+|++|+.+|.+|++. |++|+|+|+.+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 48999999999999999999996 9999999998643
No 129
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.12 E-value=2.2e-06 Score=72.85 Aligned_cols=37 Identities=38% Similarity=0.629 Sum_probs=34.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHH-hCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSE-ELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~-~~g~~VlvLE~G~~~ 65 (146)
..+||+|||+|++|+++|..|++ . |.+|+|||+.+..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~~~ 68 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKEGP 68 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 47899999999999999999999 8 9999999998654
No 130
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.12 E-value=2.3e-06 Score=73.39 Aligned_cols=38 Identities=21% Similarity=0.313 Sum_probs=33.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHh-----CCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEE-----LDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~-----~g~~VlvLE~G~~~ 65 (146)
.++||||||+|.+|+.+|.+|+++ ||.+|+|||++...
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 368999999999999999999985 38999999997643
No 131
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.12 E-value=2.8e-06 Score=68.01 Aligned_cols=37 Identities=30% Similarity=0.495 Sum_probs=34.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
++|++|||+|++|+.+|.+|+++ |++|+|+|+.+..+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEecCCcC
Confidence 57999999999999999999996 99999999987654
No 132
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.12 E-value=2.5e-06 Score=69.92 Aligned_cols=35 Identities=34% Similarity=0.677 Sum_probs=32.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++|++|||+|++|+.+|.+|++. |++|+|+|++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-GAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-SCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 479999999999999999999996 99999999974
No 133
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.11 E-value=2.4e-06 Score=69.14 Aligned_cols=38 Identities=34% Similarity=0.397 Sum_probs=34.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCC-----CcEEEEecCCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELD-----WRVLLIEAGGDPP 66 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g-----~~VlvLE~G~~~~ 66 (146)
..+|++|||+|++|+.+|..|++. | .+|+|||+.+..+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCCCCC
Confidence 468999999999999999999997 7 8999999987543
No 134
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.11 E-value=1.6e-06 Score=66.35 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=31.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
+.+|++|||+|++|+.+|..|++. |++|+|+|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA-NLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT-TCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEccC
Confidence 468999999999999999999996 9999999975
No 135
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.10 E-value=2.8e-06 Score=69.39 Aligned_cols=35 Identities=40% Similarity=0.639 Sum_probs=32.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++|++|||+|++|+.+|.+|++. |++|+|+|++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF-GKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC-CCcEEEEcCCC
Confidence 469999999999999999999995 99999999973
No 136
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.10 E-value=2.2e-06 Score=72.96 Aligned_cols=37 Identities=27% Similarity=0.409 Sum_probs=33.2
Q ss_pred CCcccEEEECCCHHHHHHHHHHH---H-hCCCcEEEEecCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLS---E-ELDWRVLLIEAGGD 64 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~---~-~~g~~VlvLE~G~~ 64 (146)
..++|+||||+|.+|+.+|.+|+ + + |.+|+|||+...
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~-G~~V~vlEK~~~ 60 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLG-GLKVTLVEKAAV 60 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTT-TCCEEEECSSCT
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhC-CCeEEEEeCcCC
Confidence 35789999999999999999999 5 5 999999999864
No 137
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.10 E-value=2.7e-06 Score=72.04 Aligned_cols=36 Identities=28% Similarity=0.276 Sum_probs=33.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCC--CcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELD--WRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g--~~VlvLE~G~~ 64 (146)
.++|+||||+|++|+.+|..|+++ | .+|+|||+...
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~-G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQA-NPNAKIALISKVYP 41 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH-CTTCCEEEEESSCG
T ss_pred ccCCEEEECCCHHHHHHHHHHHhc-CCCCcEEEEeCCCC
Confidence 368999999999999999999997 8 99999999754
No 138
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.10 E-value=1.9e-06 Score=66.89 Aligned_cols=36 Identities=25% Similarity=0.290 Sum_probs=32.7
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
....+|++|||+|++|+.+|..|++. |++|+|+|+.
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 46 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARA-QLAPLVFEGT 46 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHT-TCCCEEECCS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC
Confidence 34579999999999999999999996 9999999975
No 139
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.10 E-value=3e-06 Score=69.02 Aligned_cols=35 Identities=29% Similarity=0.394 Sum_probs=32.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+|++|||+|++|+.+|.+|++. |++|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ-GAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 478999999999999999999996 99999999983
No 140
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.10 E-value=2.1e-06 Score=71.80 Aligned_cols=36 Identities=33% Similarity=0.597 Sum_probs=33.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|+||||+|.+|+.+|.+|++ |.+|+|||+++..
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~--G~~V~vlEk~~~~ 42 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD--QHQVIVLSKGPVT 42 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT--TSCEEEECSSCTT
T ss_pred CCCCEEEECccHHHHHHHHHHhc--CCcEEEEECCCCC
Confidence 46899999999999999999998 8999999998754
No 141
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.10 E-value=3.7e-06 Score=69.75 Aligned_cols=38 Identities=26% Similarity=0.347 Sum_probs=34.5
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
....+|++|||+|++|+.+|.+|++. |++|+|||+++.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~ 77 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAM-GGRQLIVDRWPF 77 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 34579999999999999999999996 999999999874
No 142
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.10 E-value=2.3e-06 Score=69.62 Aligned_cols=33 Identities=24% Similarity=0.501 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
++|++|||+|++|+.+|.+|++. |++|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-GLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 58999999999999999999996 9999999997
No 143
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.10 E-value=3.4e-06 Score=70.37 Aligned_cols=37 Identities=32% Similarity=0.438 Sum_probs=33.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHH---hCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSE---ELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~---~~g~~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+++|..|++ . |.+|+|||+...+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~~~ 63 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQG-TADITLLQAPDIP 63 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTT-SSEEEEEECCCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC-CCcEEEEeCCCCC
Confidence 46899999999999999999999 6 8999999997543
No 144
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.10 E-value=2.7e-06 Score=64.95 Aligned_cols=32 Identities=31% Similarity=0.492 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAG 62 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G 62 (146)
||++|||+|++|+.+|..|++. |+ +|+|+|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-GVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHC-CCCcEEEEcCC
Confidence 7999999999999999999996 99 99999996
No 145
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.09 E-value=2.8e-06 Score=72.60 Aligned_cols=37 Identities=32% Similarity=0.408 Sum_probs=32.9
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
...+||+||||+|.+|+.+|..|++. |.+|+|||+..
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 54 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARG-GLHCLLITSDL 54 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHC-CCcEEEEEecc
Confidence 34579999999999999999999997 99999999974
No 146
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.09 E-value=2.7e-06 Score=69.22 Aligned_cols=35 Identities=37% Similarity=0.581 Sum_probs=32.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++|++|||+|++|..+|.+|++. |++|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY-GQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC-CCeEEEEcCCC
Confidence 469999999999999999999995 99999999974
No 147
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.09 E-value=2.6e-06 Score=71.42 Aligned_cols=34 Identities=29% Similarity=0.617 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.||+||||+|++|..+|.++++. |++|+|||+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~-G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAH-GARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-TCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 48999999999999999999996 99999999754
No 148
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.08 E-value=4.5e-06 Score=67.64 Aligned_cols=37 Identities=35% Similarity=0.491 Sum_probs=33.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCC--cEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDW--RVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G~~~ 65 (146)
+.+|++|||+|++|+.+|..|++. |. +|+|+|+.+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-G~~~~V~v~E~~~~~ 43 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-KAFDQVTLFERRGSP 43 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCCSEEEEECSSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCCCeEEEecCCCC
Confidence 468999999999999999999996 88 99999998654
No 149
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.08 E-value=2.9e-06 Score=73.99 Aligned_cols=36 Identities=25% Similarity=0.569 Sum_probs=32.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~~ 64 (146)
.++|++|||+|.+|+++|++|+++ |+ +|+|||++..
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~-G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTR-GWNNITVLDQGPL 39 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEeCCCC
Confidence 468999999999999999999996 88 9999999875
No 150
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.07 E-value=3.2e-06 Score=68.62 Aligned_cols=34 Identities=29% Similarity=0.457 Sum_probs=32.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
.+||++|||+|++|+.+|.+|++. |++|+|+|+.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~ 35 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKG 35 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECC
Confidence 368999999999999999999996 9999999997
No 151
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.07 E-value=3.5e-06 Score=70.56 Aligned_cols=38 Identities=26% Similarity=0.454 Sum_probs=33.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
...+|++|||+|++|+.+|.+|++. |.+|+|||+++..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~ 56 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQ-GLTVRAFEAASGV 56 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 4578999999999999999999995 9999999997653
No 152
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.07 E-value=4.5e-06 Score=68.67 Aligned_cols=38 Identities=29% Similarity=0.323 Sum_probs=34.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCC-CcEEEEecCCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELD-WRVLLIEAGGDPP 66 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g-~~VlvLE~G~~~~ 66 (146)
..+|++|||+|++|+++|++|+++ | ++|+|+|+.+..+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTPG 46 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCCC
Confidence 468999999999999999999997 6 8999999997654
No 153
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.06 E-value=3.8e-06 Score=66.39 Aligned_cols=39 Identities=36% Similarity=0.497 Sum_probs=34.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDPP 66 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~~ 66 (146)
.++|++|||+|++|+.+|..|+++ +|++|+|+|+.+..+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~g 103 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccc
Confidence 457999999999999999999984 389999999987653
No 154
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.06 E-value=3.4e-06 Score=69.23 Aligned_cols=31 Identities=29% Similarity=0.344 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
|+||||+|++|+.+|.+|+++ |.+|+|||++
T Consensus 1 DVvVIG~G~AGl~aA~~la~~-G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA-GKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC
Confidence 899999999999999999996 9999999998
No 155
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.05 E-value=4e-06 Score=68.43 Aligned_cols=38 Identities=32% Similarity=0.418 Sum_probs=34.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
..+|++|||+|++|+.+|..|+++ |++|+|||+.+..+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~-g~~v~vlE~~~~~g 69 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA-GHQVTVLEASERPG 69 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH-TCEEEEECSSSSSB
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCC
Confidence 467999999999999999999997 99999999987654
No 156
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.05 E-value=2.4e-06 Score=65.88 Aligned_cols=33 Identities=27% Similarity=0.347 Sum_probs=31.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEec
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEA 61 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~ 61 (146)
..+|++|||+|++|+.+|..|++. |++|+|+|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-ELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCeEEEEec
Confidence 468999999999999999999996 999999998
No 157
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.05 E-value=3.5e-06 Score=69.76 Aligned_cols=37 Identities=35% Similarity=0.482 Sum_probs=33.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHH------------hCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSE------------ELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~------------~~g~~VlvLE~G~~~ 65 (146)
..+||+|||+|++|+++|..|++ . |.+|+|||+...+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~-G~~V~liE~~~~~ 54 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSP-KLNITLIESPDVA 54 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSC-SCEEEEEECSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCC-CCeEEEEeCCCCC
Confidence 36899999999999999999999 5 9999999997543
No 158
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.04 E-value=3.6e-06 Score=64.21 Aligned_cols=33 Identities=33% Similarity=0.463 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
+||++|||+|++|+.+|.+|++. |++|+|+|+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~li~~~ 33 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK-GIRTGLMGER 33 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCC
Confidence 48999999999999999999996 9999999863
No 159
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.04 E-value=4.2e-06 Score=68.28 Aligned_cols=34 Identities=35% Similarity=0.614 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
++|++|||+|++|..+|.+|++. |++|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~-g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL-GLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 69999999999999999999996 99999999986
No 160
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=4.7e-06 Score=67.92 Aligned_cols=34 Identities=29% Similarity=0.450 Sum_probs=31.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
.++|++|||+|++|..+|.+|++. |++|+|+|++
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH-TCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEccC
Confidence 468999999999999999999997 9999999994
No 161
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.03 E-value=4.1e-06 Score=66.38 Aligned_cols=36 Identities=25% Similarity=0.635 Sum_probs=32.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~ 65 (146)
.|++|||+|++|+.+|..|+++ +|++|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 3899999999999999999984 38999999998654
No 162
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.02 E-value=5.3e-06 Score=68.23 Aligned_cols=32 Identities=25% Similarity=0.506 Sum_probs=30.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHH-hCCCcEEEEe
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSE-ELDWRVLLIE 60 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~-~~g~~VlvLE 60 (146)
.+||++|||+|++|+.+|.+|++ . |++|+|+|
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH-KKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc-CCEEEEEe
Confidence 36899999999999999999999 8 99999999
No 163
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.01 E-value=5.4e-06 Score=68.35 Aligned_cols=34 Identities=26% Similarity=0.471 Sum_probs=31.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHH-hCCCcEEEEec
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSE-ELDWRVLLIEA 61 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~-~~g~~VlvLE~ 61 (146)
..+||++|||+|++|+.+|.+|++ . |++|+|+|+
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~ 39 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVDV 39 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEES
T ss_pred ccccCEEEECCChhHHHHHHHHHHhc-CCeEEEEec
Confidence 347999999999999999999999 8 999999993
No 164
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.01 E-value=7e-06 Score=70.29 Aligned_cols=38 Identities=32% Similarity=0.498 Sum_probs=34.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
...+|++|||+|++|+.+|..|++. |++|+|+|+++..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~-G~~V~liE~~~~~ 426 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVR-GYDVVLAEAGRDL 426 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCC
Confidence 3568999999999999999999997 9999999998654
No 165
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.01 E-value=6e-06 Score=69.10 Aligned_cols=38 Identities=34% Similarity=0.495 Sum_probs=34.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
...+|++|||+|++|+.+|.+|++. |.+|+|||+++..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~-g~~v~iiE~~~~~ 44 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQA-GMKVLGIEAGEDV 44 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 3478999999999999999999995 9999999998653
No 166
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.00 E-value=5.1e-06 Score=71.08 Aligned_cols=37 Identities=38% Similarity=0.547 Sum_probs=33.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHH-----hCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSE-----ELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~-----~~g~~VlvLE~G~~~ 65 (146)
.++||+|||+|++|+++|..|++ . |.+|+|||+.+..
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCCCC
Confidence 36899999999999999999999 7 9999999997654
No 167
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.00 E-value=5.5e-06 Score=69.24 Aligned_cols=37 Identities=22% Similarity=0.443 Sum_probs=33.3
Q ss_pred CcccEEEECCCHHHHHHHHHHH-HhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLS-EELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~-~~~g~~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+.+|.+|+ + .|.+|+|+|+.+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~-~G~~v~viE~~~~~ 44 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHE-LGLTTVGFDKADGP 44 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEECCCCC
Confidence 4689999999999999999999 6 49999999997654
No 168
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.98 E-value=4.6e-06 Score=68.62 Aligned_cols=35 Identities=29% Similarity=0.387 Sum_probs=32.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHh-C-CCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEE-L-DWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~-~-g~~VlvLE~G~ 63 (146)
.||++|||+|++|+.+|.+|++. + |++|+|+|+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 58999999999999999999984 2 89999999986
No 169
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.97 E-value=8.7e-06 Score=69.66 Aligned_cols=42 Identities=26% Similarity=0.436 Sum_probs=37.7
Q ss_pred ccCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCCC
Q psy3408 25 NISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPE 67 (146)
Q Consensus 25 ~~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~~ 67 (146)
...++|||+|||+|..|+++|..|++. |++||+||+.+..+.
T Consensus 4 ~~~~~~D~~i~GtGl~~~~~a~~~~~~-g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 4 NLPSDFDVIVIGTGLPESIIAAACSRS-GQRVLHVDSRSYYGG 45 (650)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCG
T ss_pred cCCCcCCEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCCcccC
Confidence 345689999999999999999999996 999999999988753
No 170
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.96 E-value=9.5e-06 Score=70.70 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=34.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
...+|++|||+|++|+.+|..|+++ |++|+|||+++..+
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~g 372 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNF-GIKVTVLEAKDRIG 372 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEeccccee
Confidence 3468999999999999999999997 99999999976653
No 171
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.94 E-value=8.6e-06 Score=66.24 Aligned_cols=38 Identities=34% Similarity=0.417 Sum_probs=33.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGGDPP 66 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~~~~ 66 (146)
..+|++|||+|++|+.+|..|++. |. +|+|+|+++..+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~-g~~~v~~~e~~~~~g 41 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA-GITDLLILEATDHIG 41 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT-TCCCEEEECSSSSSB
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc-CCCceEEEeCCCCCC
Confidence 468999999999999999999996 88 899999987653
No 172
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.92 E-value=1.2e-05 Score=65.89 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=34.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
...+|++|||+|++|+.+|..|++. |++|+|+|+.+..
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~-G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAK-GYEVHVYDRYDRM 157 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeccCCC
Confidence 3468999999999999999999997 9999999998764
No 173
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.90 E-value=9.7e-06 Score=68.07 Aligned_cols=35 Identities=20% Similarity=0.433 Sum_probs=32.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
...||++|||+|++|+.+|.+|++. |++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~-g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY-GAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhC-CCeEEEEecc
Confidence 4579999999999999999999996 9999999984
No 174
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.90 E-value=1.2e-05 Score=65.46 Aligned_cols=34 Identities=29% Similarity=0.197 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
+|++|||+|.+|+.+|..|+++ |++|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~-G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL-GVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHC-CCcEEEEeccCC
Confidence 6999999999999999999996 999999999764
No 175
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.89 E-value=1.5e-05 Score=63.93 Aligned_cols=38 Identities=32% Similarity=0.486 Sum_probs=33.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCc--EEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWR--VLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~--VlvLE~G~~~ 65 (146)
.+.+|++|||+|++|+.+|.+|++. |++ |+|+|+.+..
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~-g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQN-GFEGRVLVIGREPEI 46 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT-TCCSCEEEEESSSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHcc-CcCCCEEEEecCCCC
Confidence 3578999999999999999999996 777 9999998764
No 176
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.88 E-value=1.2e-05 Score=65.64 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHH---hCCCc---EEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSE---ELDWR---VLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~---~~g~~---VlvLE~G~~~ 65 (146)
.+|++|||+|++|+.+|..|++ . |.+ |+|+|+.+..
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~-G~~~~~V~v~E~~~~~ 43 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEK-GAEIPELVCFEKQADW 43 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHT-TCCCCEEEEECSSSSS
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhc-CCCCCcEEEEEcCCCC
Confidence 3699999999999999999998 7 899 9999998654
No 177
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.87 E-value=1.1e-05 Score=67.74 Aligned_cols=38 Identities=29% Similarity=0.434 Sum_probs=34.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
..+|++|||+|++|+.+|..|+++ |++|+|||+.+...
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~-g~~v~~~e~~~~~~ 162 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDA-GAKVILLEKEPIPG 162 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSS-SCCEEEECSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEecCCCCC
Confidence 468999999999999999999996 99999999987653
No 178
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.84 E-value=1.7e-05 Score=64.09 Aligned_cols=37 Identities=27% Similarity=0.418 Sum_probs=32.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCC--cEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDW--RVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G~~~ 65 (146)
+.+|++|||+|++|+.+|..|++. |. +|+|+|+.+..
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~-g~~~~V~lie~~~~~ 41 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRAS-GWEGNIRLVGDATVI 41 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSCCSC
T ss_pred CCCcEEEEcCHHHHHHHHHHHHcc-CcCCCEEEEECCCCC
Confidence 468999999999999999999996 77 79999998653
No 179
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.82 E-value=1.4e-05 Score=65.59 Aligned_cols=37 Identities=11% Similarity=0.223 Sum_probs=33.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCC---CcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELD---WRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g---~~VlvLE~G~~~ 65 (146)
+++|++|||+|++|+.+|.+|++. + .+|+|+|+.+..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~-g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTN-YGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-HGGGSEEEEECSSSCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhc-CCCCCeEEEEECCCCC
Confidence 468999999999999999999996 5 999999998753
No 180
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.81 E-value=1.8e-05 Score=65.65 Aligned_cols=35 Identities=31% Similarity=0.441 Sum_probs=31.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
...+|++|||+|++|+.+|..|++. |++|+|+|+.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~-G~~v~lie~~ 244 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK-GIRTGLMGER 244 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC-CCeEEEEECC
Confidence 4579999999999999999999996 9999999973
No 181
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.80 E-value=1.9e-05 Score=62.57 Aligned_cols=35 Identities=31% Similarity=0.436 Sum_probs=30.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCC--CcEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELD--WRVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g--~~VlvLE~G~ 63 (146)
..+|++|||+|++|+.+|.+|++. | .+|+|+|+..
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKL-DGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTT-CSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhh-CCCCCEEEEECCC
Confidence 368999999999999999999986 6 5689999875
No 182
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.78 E-value=2.7e-05 Score=66.44 Aligned_cols=37 Identities=27% Similarity=0.408 Sum_probs=33.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+.+|..|++. |++|+|+|+.+..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~ 408 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAAR-GHQVTLFDAHSEI 408 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCC
Confidence 468999999999999999999996 9999999998654
No 183
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.78 E-value=2.7e-05 Score=63.01 Aligned_cols=37 Identities=32% Similarity=0.500 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~ 65 (146)
.+|++|||+|++|+.+|.+|++. ++.+|+|+|+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 57999999999999999999984 37899999998754
No 184
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.77 E-value=2.2e-05 Score=63.61 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~ 65 (146)
+|++|||+|++|+.+|.+|++. ++++|+|+|+.+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5899999999999999999984 38999999998753
No 185
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.76 E-value=2.2e-05 Score=63.68 Aligned_cols=37 Identities=19% Similarity=0.239 Sum_probs=32.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDPP 66 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~~ 66 (146)
.|++|||+|++|+.+|.+|++. ++.+|+|+|+++..+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 5999999999999999999984 489999999997643
No 186
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.75 E-value=2.5e-05 Score=62.94 Aligned_cols=37 Identities=24% Similarity=0.345 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~ 65 (146)
..|++|||+|++|+.+|.+|++. .+++|+|||+.+..
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 36899999999999999999992 28999999998754
No 187
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.75 E-value=3.6e-05 Score=61.71 Aligned_cols=37 Identities=14% Similarity=0.310 Sum_probs=32.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCC--cEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDW--RVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+.+|.+|++. |. +|+|+|+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQA-GYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHH-TCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-CCCCeEEEEECCCCC
Confidence 468999999999999999999996 76 59999998754
No 188
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.75 E-value=2.9e-05 Score=66.99 Aligned_cols=38 Identities=29% Similarity=0.411 Sum_probs=34.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
...+|++|||+|++|+.+|..|++. |++|+|+|+.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~-G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMES-GYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCc
Confidence 3468999999999999999999996 9999999998764
No 189
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.75 E-value=2.4e-05 Score=62.38 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHH---hCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSE---ELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~---~~g~~VlvLE~G~~ 64 (146)
.|++|||+|++|+.+|..|++ . +++|+|||+.+.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~-g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGS-KADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGG-GSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCC-CCeEEEEeCCCC
Confidence 379999999999999999998 6 899999999875
No 190
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.73 E-value=3.1e-05 Score=66.06 Aligned_cols=39 Identities=28% Similarity=0.321 Sum_probs=34.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
...+|++|||+|++|+.+|..|++. |++|+|+|+.+..+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVG 143 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSB
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC-CCeEEEEecCCCCC
Confidence 3468999999999999999999996 99999999987653
No 191
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.73 E-value=2.7e-05 Score=69.25 Aligned_cols=38 Identities=29% Similarity=0.462 Sum_probs=34.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
.++|++|||+|++|+.+|.+|++. |++|+|+|+.+..+
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~-G~~V~lie~~~~~G 164 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRS-GARVMLLDERAEAG 164 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCCC
Confidence 468999999999999999999996 99999999987653
No 192
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.72 E-value=3.3e-05 Score=63.26 Aligned_cols=37 Identities=24% Similarity=0.446 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~ 65 (146)
.+|++|||+|++|+.+|.+|++. ++.+|+|+|+.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 36999999999999999999984 48999999998764
No 193
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.71 E-value=1.9e-05 Score=64.98 Aligned_cols=36 Identities=39% Similarity=0.410 Sum_probs=32.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|++|||+|++|+.+|.+|++. ++|+|+|+++..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~--~~V~vie~~~~~ 142 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY--LTVALIEERGWL 142 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT--CCEEEECTTSSS
T ss_pred ccCCEEEECccHHHHHHHHHHHhc--CCEEEEeCCCCC
Confidence 357999999999999999999995 999999998765
No 194
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.70 E-value=2.6e-05 Score=61.86 Aligned_cols=35 Identities=34% Similarity=0.484 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..|++|||+|++|..+|.+|++. + +|+|+|+++..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~-g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT-Y-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhc-C-CEEEEECCCCC
Confidence 46999999999999999999986 7 99999998754
No 195
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.70 E-value=2.3e-05 Score=63.86 Aligned_cols=37 Identities=16% Similarity=0.217 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~ 65 (146)
..|++|||+|++|+.+|.+|++. ++.+|+|+|+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 46999999999999999999984 38999999998764
No 196
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.70 E-value=3.6e-05 Score=62.23 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~ 65 (146)
.|++|||+|++|+.+|.+|++. ++++|+|+|+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 3899999999999999999984 38999999998754
No 197
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.70 E-value=3.9e-05 Score=63.14 Aligned_cols=40 Identities=25% Similarity=0.515 Sum_probs=34.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDPP 66 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~~ 66 (146)
+.++|++|||+|++|+.+|..|++. .+.+|+|||+.+..+
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 4579999999999999999999873 488999999987643
No 198
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.69 E-value=4.3e-05 Score=61.05 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC--cEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW--RVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G~~~ 65 (146)
.|++|||+|++|+.+|.+|++. |+ +|+|+|+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~-g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA-KYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhh-CcCCCEEEEeCCCCC
Confidence 4899999999999999999996 77 89999998754
No 199
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.61 E-value=6.6e-05 Score=60.17 Aligned_cols=36 Identities=28% Similarity=0.426 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCc--EEEEecCCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWR--VLLIEAGGDPP 66 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~--VlvLE~G~~~~ 66 (146)
.|++|||+|++|+.+|.+|++. |++ |+|+|+.+..+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-g~~~~V~li~~~~~~~ 40 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-GFEGRISLIGDEPHLP 40 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEEECSSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-CcCCeEEEEECCCCCC
Confidence 4899999999999999999996 777 99999987643
No 200
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.60 E-value=7.3e-05 Score=65.80 Aligned_cols=39 Identities=28% Similarity=0.321 Sum_probs=34.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
...+|++|||+|++|+.+|+.|+++ |++|+|+|+.+..+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~-g~~v~v~E~~~~~G 314 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVG 314 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEecCcCC
Confidence 3467999999999999999999996 99999999987654
No 201
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.58 E-value=5.3e-05 Score=61.17 Aligned_cols=36 Identities=28% Similarity=0.374 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHH---hCCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSE---ELDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~---~~g~~VlvLE~G~~~ 65 (146)
..|++|||+|++|+.+|..|++ . +++|+|||+.+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~-g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGS-GHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGG-GSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCC-cCEEEEEeCCCCC
Confidence 3699999999999999999998 5 8999999998753
No 202
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.57 E-value=6e-05 Score=63.04 Aligned_cols=39 Identities=28% Similarity=0.438 Sum_probs=34.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDP 65 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~ 65 (146)
+...|++|||+|++|+.+|.+|++. ++.+|+|+|+.+..
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 3457999999999999999999984 37899999998764
No 203
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.56 E-value=7.8e-05 Score=66.63 Aligned_cols=37 Identities=16% Similarity=0.198 Sum_probs=33.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+.+|..|++. |+ +|+|+|+.+..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~-G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL-GYSDITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCcEEEEeCCCCC
Confidence 368999999999999999999996 98 79999998654
No 204
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.55 E-value=7.9e-05 Score=60.97 Aligned_cols=37 Identities=27% Similarity=0.267 Sum_probs=32.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCC--CcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELD--WRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g--~~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+.+|..|++. + .+|+|+|+.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKH-HSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH-CSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhc-CCCCCEEEEeCCCcC
Confidence 357999999999999999999996 6 999999998764
No 205
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.51 E-value=8e-05 Score=60.86 Aligned_cols=38 Identities=26% Similarity=0.324 Sum_probs=33.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHH-h-C----CCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSE-E-L----DWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~-~-~----g~~VlvLE~G~~~ 65 (146)
..+|++|||+|++|+.+|..|++ . + +.+|+|+|+.+..
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 35799999999999999999988 5 2 7899999998654
No 206
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.46 E-value=0.00012 Score=60.64 Aligned_cols=37 Identities=24% Similarity=0.341 Sum_probs=32.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDPP 66 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~~ 66 (146)
.|++|||+|++|+.+|.+|++. ++.+|+|+|+.+...
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 4899999999999999999984 378999999997653
No 207
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.33 E-value=0.00023 Score=56.87 Aligned_cols=40 Identities=20% Similarity=0.185 Sum_probs=33.8
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
..+...++|||+|++|+.+|.+|.. .+.+|+|+|+.+..+
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~-~~~~itlie~~~~~~ 45 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALG-KCDDITMINSEKYLP 45 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTT-TCSCEEEECSSSSCC
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhC-CCCEEEEEECCCCCC
Confidence 3457899999999999999999965 599999999987654
No 208
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.33 E-value=0.0002 Score=58.05 Aligned_cols=34 Identities=24% Similarity=0.436 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHhCC--CcEEEEecCCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELD--WRVLLIEAGGDP 65 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g--~~VlvLE~G~~~ 65 (146)
.+||||+|++|..+|.+|++. + .+|+|+|+++..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-DKESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-CSSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCCCcEEEEeCCCCC
Confidence 589999999999999999986 5 579999998654
No 209
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.26 E-value=0.00029 Score=55.77 Aligned_cols=34 Identities=32% Similarity=0.508 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~ 64 (146)
.+||||+|++|..+|.+|++. ++.+|+|||+.+.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 589999999999999999885 2468999999764
No 210
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.25 E-value=0.00024 Score=61.50 Aligned_cols=36 Identities=28% Similarity=0.388 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCC--------CcEEEEecCC-CC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELD--------WRVLLIEAGG-DP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g--------~~VlvLE~G~-~~ 65 (146)
..+++|||+|++|+.+|++|++. | ++|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~-g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL-AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH-HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CcccccCCCceEEEEeccCccc
Confidence 57999999999999999999996 7 8999999987 54
No 211
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.21 E-value=0.00056 Score=56.39 Aligned_cols=40 Identities=20% Similarity=0.232 Sum_probs=31.9
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHh-------------CCCcEEEEecCCCC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEE-------------LDWRVLLIEAGGDP 65 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~-------------~g~~VlvLE~G~~~ 65 (146)
.+..||+||||+|++|+.+|..|.++ ++.+++.+|+.+..
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f 88 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQF 88 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSC
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCC
Confidence 34568999999999999999999874 23467888987653
No 212
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.18 E-value=0.00025 Score=58.63 Aligned_cols=36 Identities=17% Similarity=0.340 Sum_probs=32.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
++..+||||+|++|..+|.+|++. +.+|+|||+.+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~-~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTK-KYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTT-TCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhC-CCcEEEECCCCC
Confidence 356899999999999999999985 899999999754
No 213
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.10 E-value=0.0005 Score=55.41 Aligned_cols=34 Identities=26% Similarity=0.448 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~ 64 (146)
.++|||+|++|..+|.+|++. ++.+|+|||+.+.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 699999999999999999984 3589999999764
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.12 E-value=0.0068 Score=48.76 Aligned_cols=36 Identities=19% Similarity=0.367 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
..+++|||+|+.|+-+|..|++. |.+|.++|+++..
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 184 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKA-GKKVTVIDILDRP 184 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCeEEEEecCccc
Confidence 46899999999999999999996 9999999998764
No 215
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.12 E-value=0.011 Score=40.08 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.-.++|+|.|..|..+|..|.+. |++|+++|+.+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCHH
Confidence 45799999999999999999996 999999998754
No 216
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.85 E-value=0.011 Score=47.11 Aligned_cols=35 Identities=23% Similarity=0.195 Sum_probs=32.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDS-GTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCcc
Confidence 4799999999999999999997 9999999998765
No 217
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.85 E-value=0.013 Score=39.47 Aligned_cols=33 Identities=24% Similarity=0.573 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.++|+|+|..|..+|..|.++ |++|+++|+.+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA-GKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 3699999999999999999996 99999999864
No 218
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.79 E-value=0.016 Score=39.77 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
.-.++|+|+|..|...|..|.+. |++|+++|+.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCCEEEEECC
Confidence 34799999999999999999996 9999999986
No 219
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.79 E-value=0.0093 Score=45.24 Aligned_cols=34 Identities=15% Similarity=0.308 Sum_probs=31.4
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|||+|..|+=+|..|++. +.+|.|+|+++..
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKF-ADKVTIVHRRDEL 180 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEeccccc
Confidence 799999999999999999996 9999999998764
No 220
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.75 E-value=0.014 Score=38.70 Aligned_cols=33 Identities=36% Similarity=0.523 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..++|+|+|..|..+|..|.+. |++|.++|+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK-GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 3689999999999999999996 99999999853
No 221
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.66 E-value=0.013 Score=47.47 Aligned_cols=35 Identities=26% Similarity=0.333 Sum_probs=32.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-+++|||+|..|+-+|..|++. |.+|.|+|+++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKL-GAQVSVVEARERI 206 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCCcc
Confidence 4799999999999999999997 9999999998765
No 222
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.53 E-value=0.017 Score=46.59 Aligned_cols=35 Identities=23% Similarity=0.480 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-+++|||+|..|+-+|..|++. |.+|.|+|+++..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 205 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANF-GTKVTILEGAGEI 205 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCCcc
Confidence 4799999999999999999996 9999999998754
No 223
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.50 E-value=0.019 Score=39.49 Aligned_cols=35 Identities=23% Similarity=0.363 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.-.++|+|+|.-|..+|..|.+. |.+|.++++.+.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHH
Confidence 45799999999999999999996 899999998643
No 224
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.49 E-value=0.016 Score=46.76 Aligned_cols=35 Identities=26% Similarity=0.289 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~-g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRL-GAEVIVLEYMDRI 202 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEecCCcc
Confidence 4799999999999999999996 9999999998764
No 225
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.46 E-value=0.017 Score=46.87 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.|+|+++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 204 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRL-GAEVTLIEYMPEI 204 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEEcCCcc
Confidence 4799999999999999999996 9999999998764
No 226
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.36 E-value=0.021 Score=44.87 Aligned_cols=35 Identities=20% Similarity=0.368 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-+++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 180 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSG-GYQLDVVAPCEQV 180 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCcch
Confidence 4799999999999999999996 9999999998764
No 227
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.35 E-value=0.017 Score=45.47 Aligned_cols=35 Identities=40% Similarity=0.534 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA-GYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT-TCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCee
Confidence 4799999999999999999996 9999999998764
No 228
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.25 E-value=0.019 Score=43.22 Aligned_cols=35 Identities=23% Similarity=0.313 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.|+|+....
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~-G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY-GSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHh-CCeeeeecccccc
Confidence 4799999999999999999996 9999999987654
No 229
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.19 E-value=0.023 Score=46.02 Aligned_cols=35 Identities=23% Similarity=0.298 Sum_probs=32.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 218 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRL-GSKVTVVEFQPQI 218 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCcc
Confidence 4799999999999999999996 9999999998765
No 230
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.04 E-value=0.026 Score=45.51 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 202 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGL-GAKTHLFEMFDAP 202 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCEEEEEEeCCch
Confidence 3799999999999999999996 9999999998664
No 231
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.94 E-value=0.033 Score=44.32 Aligned_cols=35 Identities=31% Similarity=0.387 Sum_probs=32.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTA-GVHVSLVETQPRL 180 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCcc
Confidence 4799999999999999999996 9999999998764
No 232
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.79 E-value=0.037 Score=45.10 Aligned_cols=35 Identities=26% Similarity=0.337 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRK-GKEVVLIDVVDTC 229 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHC-CCeEEEEEcccch
Confidence 4799999999999999999996 9999999998764
No 233
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.73 E-value=0.033 Score=42.87 Aligned_cols=34 Identities=18% Similarity=0.378 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|||+|..|+-+|..|++. +.+|.++|+++..
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~-g~~V~lv~~~~~~ 201 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKN-GSDIALYTSTTGL 201 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECC----
T ss_pred EEEEECCCcCHHHHHHHHHhc-CCeEEEEecCCCC
Confidence 799999999999999999996 9999999998654
No 234
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.69 E-value=0.04 Score=36.58 Aligned_cols=32 Identities=22% Similarity=0.444 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++|+|+|..|..+|..|.+. |.+|.++++..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM-GHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 599999999999999999996 89999999853
No 235
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.62 E-value=0.04 Score=44.61 Aligned_cols=35 Identities=23% Similarity=0.212 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~-G~~Vtlv~~~~~~ 201 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSF-GSEVTVVALEDRL 201 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCcc
Confidence 3799999999999999999996 9999999998654
No 236
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.56 E-value=0.041 Score=44.70 Aligned_cols=35 Identities=23% Similarity=0.292 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.|+|+.+..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-G~~Vtlv~~~~~~ 220 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTL-GSRLDVVEMMDGL 220 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCcc
Confidence 4799999999999999999996 9999999998764
No 237
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.51 E-value=0.046 Score=35.03 Aligned_cols=33 Identities=21% Similarity=0.458 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCC-CcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELD-WRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g-~~VlvLE~G~ 63 (146)
..++|+|+|..|..++..|.+. | ++|.++++.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS-SNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCH
Confidence 4689999999999999999996 7 8999999864
No 238
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.48 E-value=0.045 Score=44.24 Aligned_cols=35 Identities=20% Similarity=0.259 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 213 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRL-GADVTAVEFLGHV 213 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEeccCcc
Confidence 3799999999999999999996 9999999998764
No 239
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.46 E-value=0.041 Score=39.92 Aligned_cols=32 Identities=25% Similarity=0.484 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++|+|+|..|..+|..|.++ |+.|+++|+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-KYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 489999999999999999996 99999999764
No 240
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.46 E-value=0.026 Score=45.88 Aligned_cols=36 Identities=31% Similarity=0.423 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.-+++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 221 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVEL-GKKVRMIERNDHI 221 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHT-TCEEEEECCGGGT
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCch
Confidence 35799999999999999999996 9999999998654
No 241
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=94.46 E-value=0.046 Score=44.06 Aligned_cols=35 Identities=23% Similarity=0.251 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 206 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNY-GVDVTIVEFLPRA 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHc-CCeEEEEEcCCcc
Confidence 4799999999999999999996 9999999998764
No 242
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=94.40 E-value=0.052 Score=43.71 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=31.8
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|||+|..|+-+|..+++. |.+|.|+|+++..
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYER-GLHPTLIHRSDKI 182 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSCC
T ss_pred EEEEECCccchhhhHHHHHhc-CCcceeeeeeccc
Confidence 799999999999999999997 9999999999765
No 243
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=94.38 E-value=0.054 Score=43.47 Aligned_cols=36 Identities=25% Similarity=0.414 Sum_probs=32.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
-+++|||+|..|+-+|..|++. |.+|.++|+++...
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l 184 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQ-GKNVTMIVRGERVL 184 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCccc
Confidence 3899999999999999999996 99999999987653
No 244
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=94.32 E-value=0.053 Score=44.30 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRL-GVIVKVFGRSGSV 209 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHT-TCEEEEECCTTCC
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCcc
Confidence 4799999999999999999996 9999999998765
No 245
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.31 E-value=0.053 Score=43.47 Aligned_cols=35 Identities=20% Similarity=0.414 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~ 184 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKA-NMHVTLLDTAARV 184 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCcc
Confidence 4799999999999999999996 9999999998764
No 246
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.23 E-value=0.04 Score=44.40 Aligned_cols=35 Identities=14% Similarity=0.279 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtli~~~~~~ 212 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRI-GSEVTVVEFASEI 212 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCCcc
Confidence 4789999999999999999996 9999999998764
No 247
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.19 E-value=0.057 Score=40.57 Aligned_cols=35 Identities=23% Similarity=0.231 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++++++..
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 178 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANI-CKKVYLIHRRDGF 178 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEeeCCcc
Confidence 5799999999999999999996 9999999998654
No 248
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.14 E-value=0.055 Score=40.65 Aligned_cols=35 Identities=26% Similarity=0.297 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++|+.+..
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-BSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCEEEEEEeCccc
Confidence 3789999999999999999996 8999999998764
No 249
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.13 E-value=0.061 Score=37.75 Aligned_cols=34 Identities=24% Similarity=0.189 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhC-CCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEEL-DWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~-g~~VlvLE~G~ 63 (146)
.-.++|+|.|..|..+|..|.+ . |++|+++|+.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~-~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA-RYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH-HHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHh-ccCCeEEEEECCH
Confidence 4479999999999999999988 4 89999999864
No 250
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.13 E-value=0.061 Score=42.73 Aligned_cols=35 Identities=31% Similarity=0.508 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKL-GLSVTILEAGDEL 178 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCcc
Confidence 4799999999999999999996 9999999998764
No 251
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.09 E-value=0.057 Score=43.84 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~ 220 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGL-GSETHLVIRGETV 220 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCceEEEEeCCcc
Confidence 4799999999999999999996 9999999998764
No 252
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.03 E-value=0.056 Score=44.20 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~ 211 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRL-GIDSYIFARGNRI 211 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSSSS
T ss_pred CeEEEECChHHHHHHHHHHHHc-CCeEEEEecCCcc
Confidence 3689999999999999999996 9999999998764
No 253
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=94.03 E-value=0.059 Score=43.23 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCc-EEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWR-VLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~-VlvLE~G~~ 64 (146)
-+++|||+|..|+=+|..|++. +.+ |.++++++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~-~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPV-AKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTT-SCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHH-hCCcEEEEeCCCC
Confidence 4799999999999999999996 778 999999864
No 254
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=93.98 E-value=0.067 Score=42.95 Aligned_cols=35 Identities=31% Similarity=0.454 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 184 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQ-NYNVNLIDGHERV 184 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSST
T ss_pred CeEEEECcCHHHHHHHHHHHhc-CCEEEEEEcCCch
Confidence 3799999999999999999996 9999999998764
No 255
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.96 E-value=0.062 Score=43.60 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+=+|..|++. +.+|.++++.+..
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~-g~~V~li~~~~~~ 232 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKY-GAKKLISCYRTAP 232 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT-TCSEEEEECSSCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHh-CCeEEEEEECCCC
Confidence 3799999999999999999996 9999999997653
No 256
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.91 E-value=0.072 Score=41.05 Aligned_cols=33 Identities=15% Similarity=0.425 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+.|||+|.-|...|..|+++ |++|.++.+..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh
Confidence 3689999999999999999996 99999999864
No 257
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=93.86 E-value=0.075 Score=42.84 Aligned_cols=35 Identities=11% Similarity=0.111 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARL-GSKVTVLARNTLF 211 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEEECCcc
Confidence 3789999999999999999996 9999999998754
No 258
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=93.84 E-value=0.064 Score=44.57 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
-.++|||+|..|+-+|..|++. +.+|.++++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPE-VEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-CSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 4799999999999999999996 999999999876
No 259
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=93.82 E-value=0.067 Score=40.57 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++++.+..
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKY-GSKVYIIHRRDAF 194 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-SSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHhc-CCeEEEEecCCcC
Confidence 4799999999999999999996 9999999998654
No 260
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=93.73 E-value=0.062 Score=44.69 Aligned_cols=36 Identities=11% Similarity=0.141 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.-.++|||+|..|+-+|..|++. +.+|.|+++.+..
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~-~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAET-AKELYVFQRTPNW 220 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTT-BSEEEEEESSCCC
T ss_pred CCeEEEECCCccHHHHHHHHHhh-CCEEEEEEcCCCc
Confidence 34799999999999999999996 8999999999863
No 261
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=93.71 E-value=0.074 Score=44.28 Aligned_cols=34 Identities=15% Similarity=0.282 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
-.++|||+|..|+-+|..|++. +.+|.++++.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQ-AEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 4799999999999999999997 899999999876
No 262
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=93.69 E-value=0.079 Score=43.03 Aligned_cols=34 Identities=26% Similarity=0.355 Sum_probs=31.4
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 200 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 200 SMIVVGGGVIGLELGSVWARL-GAKVTVVEFLDTI 233 (491)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCEEEEEeccccc
Confidence 689999999999999999997 9999999998765
No 263
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=93.68 E-value=0.081 Score=42.66 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 209 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARL-GAEVTVVEFAPRC 209 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHh-CCEEEEEecCCcc
Confidence 4789999999999999999996 9999999998764
No 264
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.64 E-value=0.088 Score=43.35 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=31.6
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHL-GIKTTLLELADQV 186 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCcEEEEEcCCcc
Confidence 799999999999999999996 9999999998764
No 265
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.62 E-value=0.073 Score=40.87 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+.|||+|.-|...|..|+++ |++|.++.+..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc
Confidence 4689999999999999999996 99999999864
No 266
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.61 E-value=0.077 Score=40.55 Aligned_cols=36 Identities=22% Similarity=0.299 Sum_probs=32.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.-.++|||+|..|+-+|..|++. +.+|.++++.+..
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~-g~~V~l~~~~~~~ 190 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRF-ARSVTLVHRRDEF 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT-CSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHh-CCeEEEEEcCCcC
Confidence 35799999999999999999996 9999999998654
No 267
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.55 E-value=0.1 Score=38.97 Aligned_cols=33 Identities=15% Similarity=0.184 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.+.|||+|..|..+|..|+++ |++|.++++...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-GHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCCEEEEEcCcc
Confidence 478999999999999999996 999999988754
No 268
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.53 E-value=0.1 Score=41.38 Aligned_cols=35 Identities=29% Similarity=0.314 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKF-GVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEecCCch
Confidence 4689999999999999999996 9999999998765
No 269
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.52 E-value=0.083 Score=40.04 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++++.+..
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 187 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKF-ADEVTVIHRRDTL 187 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEeCCCcC
Confidence 4799999999999999999996 9999999998654
No 270
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.42 E-value=0.069 Score=40.56 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++++++..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~v~~~~~~ 187 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDT-ARRITLIHRRPQF 187 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTT-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEcCCcc
Confidence 4799999999999999999996 9999999998754
No 271
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.39 E-value=0.087 Score=39.64 Aligned_cols=35 Identities=26% Similarity=0.231 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++++.+..
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNI-ASEVHLIHRRDGF 180 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCcc
Confidence 4799999999999999999996 9999999998654
No 272
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.38 E-value=0.1 Score=41.24 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++|+.+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAK-GLEVDVVELAPRV 177 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCcc
Confidence 4699999999999999999996 9999999998765
No 273
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=93.35 E-value=0.099 Score=42.22 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLM-GVQTHIIEMLDRA 207 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCcC
Confidence 4799999999999999999996 9999999998765
No 274
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.25 E-value=0.1 Score=39.71 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
..+.|||+|.-|...|..|+++ |++|.++.|...
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~-g~~V~~~~r~~~ 36 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS-LPHTTLIGRHAK 36 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-CTTCEEEESSCE
T ss_pred cEEEEECCCHHHHHHHHHHHHC-CCeEEEEEeccC
Confidence 3689999999999999999997 899999998743
No 275
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.25 E-value=0.1 Score=43.48 Aligned_cols=31 Identities=13% Similarity=0.121 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
.++|||+|..|+-+|..|++. |.+|.++|+.
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASL-GGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCEEEEEECC
Confidence 699999999999999999996 9999999997
No 276
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.24 E-value=0.1 Score=42.19 Aligned_cols=35 Identities=23% Similarity=0.159 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 222 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSAL-GSKTSLMIRHDKV 222 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHc-CCeEEEEEeCCcc
Confidence 4789999999999999999996 9999999998764
No 277
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.13 E-value=0.11 Score=41.84 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
-.+||||.|..|..+|..|.+. |+.|++||+.+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHH
Confidence 4699999999999999999996 999999998754
No 278
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.10 E-value=0.1 Score=39.36 Aligned_cols=35 Identities=17% Similarity=0.288 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++++.+..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~-g~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKY-GSKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCcc
Confidence 4699999999999999999996 9999999998764
No 279
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.00 E-value=0.1 Score=39.45 Aligned_cols=35 Identities=31% Similarity=0.350 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++++.+..
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~i~~~~~~ 190 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEY-VKNVTIIEYMPKY 190 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-BSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCcEEEEEcCCcc
Confidence 4689999999999999999996 8999999997654
No 280
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=92.97 E-value=0.13 Score=41.42 Aligned_cols=35 Identities=20% Similarity=0.180 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARL-GAEVTVLEAMDKF 215 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEecCCCc
Confidence 3689999999999999999996 9999999998764
No 281
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.93 E-value=0.058 Score=44.11 Aligned_cols=34 Identities=32% Similarity=0.658 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
..+||+|+|.-|..+|..|.+. |++|+|||+.+.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~~ 37 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE-NNDITIVDKDGD 37 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST-TEEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHH
Confidence 4699999999999999999986 999999998753
No 282
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=92.92 E-value=0.14 Score=41.15 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 182 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKM-KKTVHVFESLENL 182 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEEccCcc
Confidence 3689999999999999999996 9999999998764
No 283
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.81 E-value=0.16 Score=36.69 Aligned_cols=35 Identities=14% Similarity=0.307 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
...+.|||.|..|..+|..|+++ |++|.++++...
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~-g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA-GHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHH
Confidence 34689999999999999999996 999999988653
No 284
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.80 E-value=0.13 Score=39.21 Aligned_cols=32 Identities=25% Similarity=0.465 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||+|..|..+|..|+++ |++|.++++..
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 589999999999999999996 99999998753
No 285
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.77 E-value=0.13 Score=40.30 Aligned_cols=32 Identities=31% Similarity=0.458 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.|.|||+|..|...|..++.+ |++|.++|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~-G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 688999999999999999996 99999998754
No 286
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.67 E-value=0.15 Score=39.48 Aligned_cols=32 Identities=28% Similarity=0.447 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
..+.|||+|.-|...|..|+++ |++|.++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~-g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA-GEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT-TCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEECh
Confidence 3689999999999999999996 9999999884
No 287
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=92.66 E-value=0.11 Score=41.46 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~~ 65 (146)
.-.++|||+|..|+-+|..|++. ++.+|.++++.+..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 45899999999999999999984 47899999998754
No 288
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.61 E-value=0.1 Score=40.15 Aligned_cols=35 Identities=26% Similarity=0.333 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++++++..
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~ 198 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKN-AASVTLVHRGHEF 198 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTT-SSEEEEECSSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCCC
Confidence 3799999999999999999996 9999999998654
No 289
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=92.58 E-value=0.16 Score=37.87 Aligned_cols=36 Identities=25% Similarity=0.224 Sum_probs=32.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
-.++|||+|..|+-+|..|++. +.+|.++++++...
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~-g~~v~~~~~~~~~~ 190 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSY-STKVYLIHRRDTFK 190 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCeEEEEEeCCCCC
Confidence 4799999999999999999997 99999999987653
No 290
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.54 E-value=0.15 Score=38.63 Aligned_cols=32 Identities=16% Similarity=0.284 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||+|..|...|..|+++ |++|.+.++..
T Consensus 6 kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 588999999999999999996 99999998764
No 291
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.53 E-value=0.15 Score=38.48 Aligned_cols=32 Identities=28% Similarity=0.340 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||+|..|...|..|+++ |++|.++++.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 588999999999999999996 99999998753
No 292
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=92.43 E-value=0.17 Score=41.03 Aligned_cols=32 Identities=13% Similarity=0.067 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++|||+|..|+-+|..|++. |.+|.++|+..
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 218 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGI-GLDTTVMMRSI 218 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCceEEEEcCc
Confidence 699999999999999999996 99999999874
No 293
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=92.40 E-value=0.16 Score=41.65 Aligned_cols=35 Identities=11% Similarity=0.206 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT-GRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEecCcc
Confidence 5799999999999999999996 9999999998764
No 294
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=92.39 E-value=0.16 Score=42.23 Aligned_cols=35 Identities=26% Similarity=0.422 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 222 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRER-GIEVTLVEMANQV 222 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCcc
Confidence 3799999999999999999996 9999999998764
No 295
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.38 E-value=0.14 Score=42.05 Aligned_cols=35 Identities=26% Similarity=0.297 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++|+++..
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~-g~~Vtlv~~~~~l 390 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAPEM 390 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-BSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCccc
Confidence 3799999999999999999996 8999999998764
No 296
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.32 E-value=0.16 Score=39.24 Aligned_cols=34 Identities=32% Similarity=0.486 Sum_probs=30.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
+...+.|||+|..|..+|..|+++ |++|.++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~-G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHEN-GEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 356899999999999999999996 9999999875
No 297
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.21 E-value=0.16 Score=39.07 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=28.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
.....+.|||+|.-|...|..|+++ |++|.++ +.
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~ 50 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARA-GHEVILI-AR 50 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHT-TCEEEEE-CC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHC-CCeEEEE-Ec
Confidence 3455789999999999999999996 9999998 54
No 298
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.02 E-value=0.2 Score=40.81 Aligned_cols=35 Identities=23% Similarity=0.355 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~ 217 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTEL-GVPVTVVASQDHV 217 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCCcc
Confidence 4789999999999999999996 9999999998764
No 299
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=91.96 E-value=0.2 Score=41.19 Aligned_cols=31 Identities=16% Similarity=0.150 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
.++|||+|..|+-+|..|++. |.+|.++|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~-G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGI-GLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHc-CCeEEEEecc
Confidence 699999999999999999996 9999999985
No 300
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.91 E-value=0.19 Score=38.40 Aligned_cols=30 Identities=23% Similarity=0.332 Sum_probs=27.9
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEec
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEA 61 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~ 61 (146)
.+.|||+|..|...|..|+++ |++|.++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-GNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-CCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEEc
Confidence 378999999999999999997 999999998
No 301
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.88 E-value=0.21 Score=41.61 Aligned_cols=34 Identities=12% Similarity=0.023 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
-.++|||+|..|+=+|..+++. |.+|.|+++...
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~l-G~~VTii~~~~~ 257 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSL-GYDVTVAVRSIV 257 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-TCCEEEEESSCS
T ss_pred ceEEEECCCHHHHHHHHHHHhc-CCeEEEeccccc
Confidence 3799999999999999999996 999999998543
No 302
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=91.83 E-value=0.19 Score=41.08 Aligned_cols=36 Identities=19% Similarity=0.115 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhC--CCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEEL--DWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~--g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++.. |.+|.++|+++..
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc
Confidence 37999999999999999999831 8999999998764
No 303
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=91.68 E-value=0.19 Score=40.91 Aligned_cols=36 Identities=22% Similarity=0.117 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHh--CCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEE--LDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~--~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +|.+|.++|+.+..
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 4799999999999999999883 18999999998764
No 304
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=91.64 E-value=0.25 Score=40.94 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-+++|+|.|..|..+|.+|.+. |+.|+++|+.+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEECChHH
Confidence 5799999999999999999996 9999999987654
No 305
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.57 E-value=0.22 Score=38.38 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+.|||+|..|...|..|+++ |++|.++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-GQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4689999999999999999996 99999998753
No 306
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.53 E-value=0.22 Score=38.01 Aligned_cols=33 Identities=18% Similarity=0.397 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC--cEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW--RVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G~ 63 (146)
..+.|||+|..|..+|..|++. |+ .|.++++..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 4689999999999999999996 88 999998864
No 307
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.51 E-value=0.23 Score=38.12 Aligned_cols=32 Identities=31% Similarity=0.386 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+.|||+|.-|...|..|+ + |++|.++.+..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-c-CCceEEEECCH
Confidence 36899999999999999999 6 99999999875
No 308
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=91.42 E-value=0.23 Score=40.19 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGL-GVKTTLLHRGDLI 226 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHc-CCeEEEEECCCcc
Confidence 4789999999999999999996 9999999998754
No 309
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=91.38 E-value=0.23 Score=36.96 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++++.+..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~-g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANI-CSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTT-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCCCC
Confidence 4799999999999999999996 9999999998764
No 310
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=91.19 E-value=0.27 Score=39.75 Aligned_cols=33 Identities=18% Similarity=0.150 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGL-GYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCC
Confidence 3689999999999999999996 99999999853
No 311
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.16 E-value=0.25 Score=40.54 Aligned_cols=34 Identities=24% Similarity=0.457 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
...+.|||.|..|+.+|..|+++ |++|.++++..
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 45789999999999999999996 99999998754
No 312
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.11 E-value=0.27 Score=39.50 Aligned_cols=35 Identities=26% Similarity=0.321 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGL-GVKTTLIYRGKEI 205 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCCcc
Confidence 4789999999999999999996 9999999998754
No 313
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.08 E-value=0.21 Score=37.44 Aligned_cols=35 Identities=23% Similarity=0.183 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++++++..
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~-~~~v~~~~~~~~~ 189 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPI-AKEVSIIHRRDKF 189 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTT-BSEEEEECSSSSC
T ss_pred CEEEEECCCHhHHHHHHHHHhh-CCeEEEEEecCcC
Confidence 4789999999999999999996 8999999998764
No 314
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.85 E-value=0.28 Score=38.10 Aligned_cols=32 Identities=31% Similarity=0.458 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+-|||+|..|...|..|+++ |++|.+.++.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 588999999999999999996 99999998764
No 315
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=90.80 E-value=0.21 Score=36.90 Aligned_cols=33 Identities=9% Similarity=-0.034 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
-.++|||+|..|+-+|..|++. + +|.++++++.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~-g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDW-G-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGT-S-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhc-C-cEEEEECCCC
Confidence 4789999999999999999997 7 9999998865
No 316
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.77 E-value=0.42 Score=37.25 Aligned_cols=34 Identities=15% Similarity=0.259 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~~ 64 (146)
..+.|||+|..|..+|..|++. ++ +|.++|....
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVKG 44 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECChh
Confidence 4799999999999999999996 87 8999988643
No 317
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.70 E-value=0.38 Score=34.85 Aligned_cols=33 Identities=24% Similarity=0.306 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+.|||.|..|...|..|.+. |++|.++++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~-g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS-GFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999999996 89999998864
No 318
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.42 E-value=0.35 Score=34.44 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=28.4
Q ss_pred cEEEEC-CCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVG-GGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG-~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.||| +|..|...|..|.++ |++|.++++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL-GHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 378999 999999999999996 89999998753
No 319
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=90.41 E-value=0.3 Score=39.32 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-+++|||+|..|+-+|..|++..+.+|.++|+.+..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQI 195 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcc
Confidence 479999999999999999998338999999998754
No 320
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=90.29 E-value=0.33 Score=36.66 Aligned_cols=32 Identities=25% Similarity=0.421 Sum_probs=28.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.++|||+|..|+-+|..|++. + +|.++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~-~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTV-A-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhh-C-CEEEEECCC
Confidence 4799999999999999999996 6 699998874
No 321
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.27 E-value=0.29 Score=39.89 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.+.|||+|..|..+|..|+++ |+.|+++|+..
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV-GISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 3588999999999999999996 99999998754
No 322
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.21 E-value=0.14 Score=37.36 Aligned_cols=33 Identities=15% Similarity=0.142 Sum_probs=28.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.-.++|+|.|..|..+|..|.+. |+ |+++|+.+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS-EV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS-EE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhC-Ce-EEEEECCH
Confidence 44799999999999999999986 88 99999764
No 323
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.20 E-value=0.24 Score=37.86 Aligned_cols=34 Identities=18% Similarity=0.370 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.-.++|||+|..|...+..|.+. |.+|.|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~-Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT-GCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG-TCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCC
Confidence 45799999999999999999996 99999998753
No 324
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.98 E-value=0.35 Score=39.37 Aligned_cols=32 Identities=31% Similarity=0.340 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||.|..|..+|..|+++ |++|.++++.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAEL-GANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhc-CCEEEEEECCH
Confidence 588999999999999999996 99999998864
No 325
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=89.98 E-value=0.4 Score=35.50 Aligned_cols=33 Identities=15% Similarity=0.294 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
.-.++|||+|..|...|..|.+. |.+|.|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQE-GAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGG-CCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEECCC
Confidence 45899999999999999999996 9999999764
No 326
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.97 E-value=0.49 Score=36.38 Aligned_cols=33 Identities=18% Similarity=0.426 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~ 63 (146)
..+.|||+|..|..+|..|+++ |+ +|.++++..
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-NLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCc
Confidence 4689999999999999999997 87 999998864
No 327
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=89.97 E-value=0.28 Score=40.24 Aligned_cols=36 Identities=28% Similarity=0.431 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHh-------------CCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEE-------------LDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~-------------~g~~VlvLE~G~~~ 65 (146)
..++|||+|+.|+=+|.+|++. ...+|.|+|+++..
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i 266 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV 266 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc
Confidence 4699999999999999998752 13689999999875
No 328
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=89.93 E-value=0.35 Score=39.64 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
-.+.|||+|..|...|..|+++ |+.|++.|+.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-GIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEECcHH
Confidence 3688999999999999999996 999999987643
No 329
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.91 E-value=0.44 Score=35.16 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
...+-|||.|..|..+|..|+++ |++|.+.++.+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~-G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADL-GHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCChh
Confidence 45788999999999999999996 999999987643
No 330
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.88 E-value=0.51 Score=35.02 Aligned_cols=33 Identities=27% Similarity=0.434 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|.|+|.-|..++.+|.++ |++|.++.+...
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~~ 37 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQ-GHEVTGLRRSAQ 37 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECTTS
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 589999999999999999996 999999998754
No 331
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.84 E-value=0.4 Score=35.76 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~ 63 (146)
...++|||+|-.|+.+|..|++. |. ++.|++...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence 45899999999999999999997 75 889999875
No 332
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.61 E-value=0.38 Score=37.86 Aligned_cols=33 Identities=30% Similarity=0.345 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+.|||+|.-|..+|..|+++ |++|.+.++.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-GQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4799999999999999999996 99999998863
No 333
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=89.60 E-value=0.32 Score=39.20 Aligned_cols=32 Identities=31% Similarity=0.379 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||.|..|..+|..|+++ |++|.++++.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 478999999999999999996 99999998753
No 334
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=89.44 E-value=0.44 Score=38.62 Aligned_cols=36 Identities=11% Similarity=0.127 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~~~ 65 (146)
.-+++|||+|..|.=+|..+.+. |. +|.++++.+..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~-Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQ-GATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHc-CCCEEEEEEeCCcc
Confidence 34799999999999999998886 65 69999998654
No 335
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=89.15 E-value=0.41 Score=38.78 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHH-------------------hCCC-cEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSE-------------------ELDW-RVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~-------------------~~g~-~VlvLE~G~~ 64 (146)
-.++|||+|..|+-+|..|++ +.+. +|.|+++.+.
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 479999999999999999983 2365 7999999764
No 336
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=89.13 E-value=0.54 Score=38.28 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=32.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
...+-|||.|.-|+.+|..|+++ |++|+++++.+..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCHHH
Confidence 45788999999999999999996 9999999987653
No 337
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.13 E-value=0.53 Score=34.80 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
-.++|.|+|.-|..++.+|.++ |++|.++.|...
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQ-GWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGG-TCEEEEEESCGG
T ss_pred CcEEEECCcHHHHHHHHHHHHC-CCEEEEEEcChh
Confidence 3699999999999999999997 999999988643
No 338
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=89.09 E-value=0.46 Score=36.55 Aligned_cols=33 Identities=18% Similarity=0.398 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
+-.+-|||.|..|...|..|+ + |+.|.+.++.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 557899999999999999999 7 99999998764
No 339
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=89.01 E-value=0.5 Score=35.52 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.+.|||.|..|..+|..|+++ |++|.+.++.+.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCeEEEEcCCHH
Confidence 478999999999999999996 999999988654
No 340
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.95 E-value=0.49 Score=35.96 Aligned_cols=33 Identities=24% Similarity=0.154 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+-|||.|..|..+|..|+++ |++|.+.++.+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-GLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 4688999999999999999996 99999998754
No 341
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.94 E-value=0.49 Score=36.17 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
..+-|||.|..|..+|..|++. |++|.+.++.+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN-GFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCHH
Confidence 4689999999999999999996 999999988654
No 342
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.86 E-value=0.28 Score=38.25 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||+|..|...|..|+++ |++|.++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 689999999999999999996 89999998753
No 343
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=88.86 E-value=1 Score=36.28 Aligned_cols=37 Identities=24% Similarity=0.451 Sum_probs=31.8
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGG 63 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~ 63 (146)
.-..-.++|+|+|.+|..+|.-|... |. +|.++|+..
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~-Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAA-GATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 34467899999999999999999887 77 999999964
No 344
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=88.83 E-value=0.43 Score=37.43 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHhCC-------CcEEEEecCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELD-------WRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g-------~~VlvLE~G~~ 64 (146)
.+.|||+|..|..+|..|+++ | ++|.++++...
T Consensus 23 kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECChh
Confidence 599999999999999999996 8 89999988654
No 345
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=88.79 E-value=0.37 Score=41.37 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=30.4
Q ss_pred ccEEEEC--CCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVG--GGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG--~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.++||| +|..|+-+|..|++. |.+|.++|+++
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~-G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATA-GHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc-CCEEEEEeccc
Confidence 3799998 999999999999996 99999999987
No 346
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=88.78 E-value=0.52 Score=36.14 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=28.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCC--cEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDW--RVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G~ 63 (146)
.+.|||+|..|..+|..|+.+ ++ .|.++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCH
Confidence 478999999999999999996 88 899998753
No 347
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=88.76 E-value=0.55 Score=34.57 Aligned_cols=32 Identities=25% Similarity=0.608 Sum_probs=28.3
Q ss_pred cEEEECCCHHHHHHHHHHHHhCC-CcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELD-WRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g-~~VlvLE~G~ 63 (146)
.+.|||.|..|...|..|.+. | ++|.+.++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-CSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHC-CCCeEEEECCCH
Confidence 378999999999999999996 8 9999998753
No 348
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.71 E-value=0.47 Score=39.05 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~~ 64 (146)
..+.|||.|..|..+|..|++++|+ +|+++++...
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4689999999999999999994489 9999998766
No 349
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=88.67 E-value=0.66 Score=35.93 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=28.6
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|+|+|..|..+|..+.+. |++|++++..++
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~-G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKA-GMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 378999999999999888775 999999998654
No 350
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.65 E-value=0.71 Score=32.50 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=28.4
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++|.|+ |.-|..++.+|.++ |++|.++.|..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR-GHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCc
Confidence 3789995 99999999999997 99999999874
No 351
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.64 E-value=0.22 Score=33.52 Aligned_cols=34 Identities=18% Similarity=0.255 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.-.+.|||+|..|...|..|.+. |.+|.+.++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~-g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP-QYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT-TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 34799999999999999999885 88899998864
No 352
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.58 E-value=0.91 Score=36.44 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=31.5
Q ss_pred cCCcccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecC
Q psy3408 26 ISGKFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAG 62 (146)
Q Consensus 26 ~~~~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G 62 (146)
......++|+|+|.+|..+|..|... |. +|.++++.
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~-G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDL-GVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECC
Confidence 34567999999999999999999987 66 89999997
No 353
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.52 E-value=0.51 Score=38.79 Aligned_cols=32 Identities=25% Similarity=0.465 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||+|..|...|..|+++ |++|.+.|+..
T Consensus 7 kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASH-GHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 588999999999999999996 99999998764
No 354
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.51 E-value=0.47 Score=35.67 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.+-|||.|..|..+|..|+++ |++|.+.++.+.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA-GFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-TCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCHH
Confidence 478999999999999999997 999999988654
No 355
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=88.45 E-value=0.59 Score=38.49 Aligned_cols=35 Identities=11% Similarity=0.259 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. +.+|.++++.+..
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~-~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQ-AAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhc-CceEEEEEcCCcc
Confidence 4789999999999999999997 8999999997654
No 356
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=88.34 E-value=0.55 Score=38.21 Aligned_cols=35 Identities=29% Similarity=0.376 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHh---CCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEE---LDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~---~g~~VlvLE~G~~ 64 (146)
-.++|||+|..|+-+|..|++. .|.+|.++|+.+.
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~ 218 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG 218 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcc
Confidence 4799999999999999999862 2688999998753
No 357
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=88.23 E-value=0.7 Score=32.73 Aligned_cols=31 Identities=19% Similarity=0.391 Sum_probs=28.2
Q ss_pred EEEECC-CHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 32 FIIVGG-GSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 32 ~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
++|.|+ |.-|..++.+|.++ |++|.++.|..
T Consensus 3 ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRR-GHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 789997 99999999999997 99999998864
No 358
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=88.23 E-value=0.46 Score=36.05 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
...+.|||.|..|..+|..|+++ |++|.+.++.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-TTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHH
Confidence 35799999999999999999996 999999998765
No 359
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.21 E-value=0.41 Score=36.97 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCC-------CcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELD-------WRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g-------~~VlvLE~G~~ 64 (146)
..+.|||+|..|...|..|+++ | ++|.++++...
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChh
Confidence 3689999999999999999996 7 89999988654
No 360
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=88.16 E-value=0.41 Score=36.17 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=27.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhC----C-CcEEEEec
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEEL----D-WRVLLIEA 61 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~----g-~~VlvLE~ 61 (146)
..+.|||+|..|...|..|++++ | ++|.++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 36899999999999999999842 7 89999987
No 361
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.12 E-value=0.62 Score=35.43 Aligned_cols=32 Identities=22% Similarity=0.493 Sum_probs=29.2
Q ss_pred cEEEEC-CCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVG-GGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG-~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.||| .|..|..+|..|++. |++|.++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~-G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRAS-GYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhC-CCeEEEEECCc
Confidence 689999 999999999999996 99999998764
No 362
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.12 E-value=0.63 Score=34.97 Aligned_cols=33 Identities=18% Similarity=0.241 Sum_probs=29.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.++|+|+|-.|..+|..|++. |.+|.+..|..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL-DCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 4699999999999999999997 89999997753
No 363
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.09 E-value=0.63 Score=34.60 Aligned_cols=32 Identities=25% Similarity=0.282 Sum_probs=28.3
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||.|..|...|..|.+. |++|.++++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-GHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 378999999999999999996 89999998753
No 364
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.03 E-value=0.7 Score=35.88 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~~ 64 (146)
..+.|||+|..|..+|..|++. |+ +|.++|....
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCHH
Confidence 4799999999999999999996 87 8999988643
No 365
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.87 E-value=0.77 Score=31.89 Aligned_cols=33 Identities=15% Similarity=0.332 Sum_probs=29.2
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|.|+ |.-|..++.+|.++ |++|.++.|...
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~~ 38 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSS 38 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGG
T ss_pred EEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeChh
Confidence 5889998 99999999999997 999999988643
No 366
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=87.85 E-value=0.64 Score=35.85 Aligned_cols=32 Identities=28% Similarity=0.372 Sum_probs=28.2
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCC--cEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDW--RVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G~ 63 (146)
.+.|||+|..|..+|..|+++ |+ .|.++++..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCCh
Confidence 478999999999999999996 88 899998753
No 367
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=87.81 E-value=0.64 Score=35.54 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=28.4
Q ss_pred cEEEECCCHHHHHHHHHHHHhCC--CcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELD--WRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g--~~VlvLE~G~ 63 (146)
.+.|||+|..|..+|..|+++ | ..|.++++..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~-g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQ-GVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEcCCH
Confidence 478999999999999999996 7 7899998854
No 368
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.73 E-value=0.89 Score=33.39 Aligned_cols=34 Identities=15% Similarity=0.293 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCC----CcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELD----WRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g----~~VlvLE~G~~ 64 (146)
..+.|||.|..|...|..|.++ | ++|.+.++...
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~-g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA-NIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-TSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCCCCCeEEEEeCCcc
Confidence 4689999999999999999996 7 79999988654
No 369
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=87.72 E-value=0.73 Score=37.19 Aligned_cols=35 Identities=14% Similarity=0.108 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
...++|||+|..|..+|..+... |.+|++.|+.+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHH
Confidence 45899999999999999988886 999999988754
No 370
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=87.66 E-value=0.55 Score=35.47 Aligned_cols=32 Identities=19% Similarity=0.316 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||.|..|...|..|.+. |++|.+.++..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 588999999999999999996 99999998764
No 371
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=87.52 E-value=0.62 Score=38.04 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
...+.|||.|..|+.+|..++++ |++|+.+|-..
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~-G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL-GHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 45789999999999999999997 99999998653
No 372
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=87.51 E-value=0.45 Score=37.58 Aligned_cols=30 Identities=17% Similarity=0.300 Sum_probs=26.8
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEe
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIE 60 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE 60 (146)
.+.|||+|..|...|..|+++.|++|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 588999999999999999873389999998
No 373
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=87.45 E-value=0.74 Score=34.99 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
..+.|||.|..|...|..|.+. |++|.+.++...
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-g~~V~~~~~~~~ 64 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-GHTVTVWNRTAE 64 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSGG
T ss_pred CeEEEEcccHHHHHHHHHHHhC-CCEEEEEeCCHH
Confidence 4699999999999999999996 899999988643
No 374
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.39 E-value=0.83 Score=35.05 Aligned_cols=34 Identities=29% Similarity=0.541 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHh-CCCcEEEEecCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~-~g~~VlvLE~G~~ 64 (146)
.+.|||+|..|..+|..|++. .++.|.++|+...
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 478999999999999999984 2789999998653
No 375
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=87.15 E-value=0.85 Score=35.05 Aligned_cols=35 Identities=14% Similarity=0.281 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCC----CcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELD----WRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g----~~VlvLE~G~~ 64 (146)
...+.|||.|..|..+|..|.++ | ++|.+.++...
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-GVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-TSSCGGGEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCCCcceEEEECCCcc
Confidence 34699999999999999999996 7 89999988653
No 376
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.11 E-value=0.79 Score=36.02 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.++|+|+|..|..+|..+... |.+|+++++..
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM-GAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 5789999999999999999886 89999998764
No 377
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=87.08 E-value=0.8 Score=34.94 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
...+-|||.|..|..+|..|.++ |++|.+.++.+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQ-GKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 34789999999999999999996 99999998764
No 378
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=87.06 E-value=0.62 Score=35.79 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+.|||.|..|..+|..|++. |++|.+.++..
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-GYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 3689999999999999999996 99999998764
No 379
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=87.05 E-value=0.75 Score=35.21 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAG 62 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G 62 (146)
..+-|||.|..|..+|..|+++ |+ +|.+.++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCC
Confidence 4689999999999999999997 88 99999985
No 380
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.04 E-value=0.89 Score=32.68 Aligned_cols=35 Identities=14% Similarity=0.320 Sum_probs=30.3
Q ss_pred cccEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.-.++|.|+ |.-|..++.+|.++ |++|.++.|...
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~~ 56 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNK-GHEPVAMVRNEE 56 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSGG
T ss_pred CCeEEEECCCChHHHHHHHHHHhC-CCeEEEEECChH
Confidence 346899997 99999999999996 999999988643
No 381
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=86.99 E-value=1.1 Score=33.50 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=29.0
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|.|+ |+-|..++.+|.++ |++|.++-|.+.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~-G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNAR-GHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCC
Confidence 3789998 99999999999997 999999988644
No 382
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=86.86 E-value=0.5 Score=38.35 Aligned_cols=34 Identities=18% Similarity=0.206 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
...-|||.|.-|+.+|..|+++ |++|+++++-+.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCHH
Confidence 4678999999999999999997 999999988654
No 383
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=86.80 E-value=0.73 Score=37.19 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.+.|||.|.+|..+|..|.++ |++|.+.|+..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~-G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL-GAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEEEeCCc
Confidence 4689999999999999999996 99999999865
No 384
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=86.76 E-value=0.83 Score=37.63 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=31.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
+...+-|||.|..|..+|..|+++ |++|.+.++-+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 356899999999999999999996 99999998754
No 385
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=86.73 E-value=0.83 Score=34.04 Aligned_cols=32 Identities=22% Similarity=0.413 Sum_probs=27.9
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCC--cEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDW--RVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G~ 63 (146)
.+.|||.|..|...|..|.+. |+ +|.+.++.+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCCH
Confidence 478999999999999999986 87 899988753
No 386
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=86.73 E-value=0.44 Score=42.30 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
-.++|||+|..|+-+|..|++. |.+|.|+|+.+..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~-G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAAT-GGVVAVIDARSSI 319 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGG-TCCSEEEESCSSC
T ss_pred CeEEEEcCCHHHHHHHHHHHHc-CCcEEEEECCCcc
Confidence 3799999999999999999996 8899999998754
No 387
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.68 E-value=0.78 Score=34.43 Aligned_cols=32 Identities=22% Similarity=0.436 Sum_probs=28.9
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||. |..|..+|..|.++ |++|.+.++..
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDS-AHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 6899999 99999999999996 89999998753
No 388
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=86.64 E-value=0.75 Score=35.39 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCC-CcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELD-WRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g-~~VlvLE~G~ 63 (146)
..+-|||.|..|..+|..|+++ | ++|.+.++.+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-NAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 3589999999999999999996 9 9999999864
No 389
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=86.59 E-value=0.72 Score=41.18 Aligned_cols=32 Identities=25% Similarity=0.301 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~ 63 (146)
.++|||+|..|+=+|..+.+. |. +|.++++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~-G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRC-GARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHc-CCCEEEEEEecC
Confidence 899999999999999999986 75 899999986
No 390
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=86.51 E-value=0.8 Score=36.64 Aligned_cols=35 Identities=11% Similarity=0.074 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.-.++|||+|..|..+|..+... |.+|+++++.+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 45899999999999999998886 899999988653
No 391
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=86.47 E-value=0.62 Score=37.46 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.+.|||.|.+|..+|..|.++ |++|.+.|.....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~-G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLAR-GVTPRVMDTRMTP 40 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTT-TCCCEEEESSSSC
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCEEEEEECCCCc
Confidence 589999999999999888886 9999999987544
No 392
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=86.45 E-value=0.81 Score=34.27 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=28.6
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||.|..|...|..|.+. |++|.+.++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-GYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 478999999999999999996 89999998864
No 393
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=86.41 E-value=0.81 Score=37.47 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
+.++-|||.|..|..+|..|+++ |++|.+.++.+
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-GYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 45899999999999999999996 99999998753
No 394
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.37 E-value=0.92 Score=35.56 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.++|+|+|..|..++..+... |.+|.++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 5799999999999999999886 88999998764
No 395
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=86.36 E-value=1 Score=33.56 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=30.3
Q ss_pred ccEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
-.++|.|+ |.-|..++.+|.++ |++|.++.+...
T Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 42 (321)
T 3vps_A 8 HRILITGGAGFIGGHLARALVAS-GEEVTVLDDLRV 42 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCCEEEECCCSS
T ss_pred CeEEEECCCChHHHHHHHHHHHC-CCEEEEEecCCc
Confidence 46899998 99999999999997 999999998654
No 396
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=86.26 E-value=0.73 Score=34.56 Aligned_cols=33 Identities=12% Similarity=0.296 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+.|||.|..|...|..|.+. |++|.++++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 3689999999999999999996 89999998754
No 397
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=86.26 E-value=0.71 Score=39.82 Aligned_cols=32 Identities=31% Similarity=0.520 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+-|||+|..|..+|..|+++ |+.|++.|+.+
T Consensus 314 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILS-NYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhC-CCEEEEEECCH
Confidence 588999999999999999996 99999998753
No 398
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.15 E-value=0.43 Score=34.60 Aligned_cols=34 Identities=24% Similarity=0.510 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEE-EecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLL-IEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~Vlv-LE~G~~ 64 (146)
..+.|||+|..|...|..|.++ |++|.+ .++...
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r~~~ 58 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-QIPAIIANSRGPA 58 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-TCCEEEECTTCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCCHH
Confidence 4789999999999999999996 899988 776543
No 399
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=86.06 E-value=0.88 Score=37.18 Aligned_cols=31 Identities=32% Similarity=0.471 Sum_probs=28.5
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
++-|||.|..|..+|..|+++ |++|.+.++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-GFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 588999999999999999996 9999999875
No 400
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=85.95 E-value=0.93 Score=34.91 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC--cEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW--RVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G~ 63 (146)
..+.|||.|..|...|..|.+. |+ +|.+.++.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCH
Confidence 4689999999999999999996 88 899998764
No 401
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.93 E-value=0.94 Score=35.68 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
...+.|||.|..|..+|..|+++ |++|.+.++.+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~-G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG-GHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 45789999999999999999996 99999998864
No 402
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=85.90 E-value=0.93 Score=37.06 Aligned_cols=34 Identities=15% Similarity=0.279 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhC-CCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEEL-DWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~-g~~VlvLE~G~ 63 (146)
..+.|||.|..|+.+|..|+++. |++|.++++..
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46999999999999999999963 68999998753
No 403
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=85.77 E-value=0.86 Score=36.83 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHh-------------------CC-CcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEE-------------------LD-WRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~-------------------~g-~~VlvLE~G~~ 64 (146)
-.++|||+|..|+=+|..|++. .+ .+|.|+++.+.
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 4799999999999999999872 13 59999999764
No 404
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=85.65 E-value=0.86 Score=33.58 Aligned_cols=30 Identities=23% Similarity=0.242 Sum_probs=26.8
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEec
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEA 61 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~ 61 (146)
.+-|||.|..|...|..|++. |++|.+.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-GVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC-CCeEEEeCC
Confidence 367999999999999999996 999998766
No 405
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.62 E-value=0.8 Score=37.28 Aligned_cols=34 Identities=44% Similarity=0.629 Sum_probs=29.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.-.++|+|+|-.|..+|..|.+ +++|.+||+...
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~d~~ 268 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ--TYSVKLIERNLQ 268 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHH
T ss_pred ccEEEEEcchHHHHHHHHHhhh--cCceEEEecCHH
Confidence 3479999999999999999965 689999999653
No 406
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=85.59 E-value=0.74 Score=34.61 Aligned_cols=33 Identities=18% Similarity=0.195 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.++|+|+|-+|..+|..|.+. |.+|.|..|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~-G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQA-QQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHT-TCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 4699999999999999999997 79999998764
No 407
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=85.54 E-value=0.97 Score=36.14 Aligned_cols=35 Identities=14% Similarity=0.196 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.-.++|||+|..|..+|..+... |.+|+++++...
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHH
Confidence 34789999999999999988875 889999988654
No 408
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=85.51 E-value=1.3 Score=34.33 Aligned_cols=33 Identities=24% Similarity=0.481 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~ 63 (146)
..+.|||+|..|..+|..|+.. ++ +|.++|.-.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-NLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCH
Confidence 4689999999999999999996 77 899998754
No 409
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=85.48 E-value=1.3 Score=33.51 Aligned_cols=35 Identities=14% Similarity=0.244 Sum_probs=29.9
Q ss_pred cccEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.-.++|.|+ |.-|..++.+|.++ |++|.++.+...
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~ 54 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQ-GRTVRGFDLRPS 54 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHT-TCCEEEEESSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCC
Confidence 457999998 99999999999997 999999998753
No 410
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=85.47 E-value=1.1 Score=35.32 Aligned_cols=35 Identities=14% Similarity=0.126 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.-.++|+|+|..|..++..+... |.+|++.++.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 45799999999999999988875 889999998654
No 411
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=85.41 E-value=0.89 Score=34.11 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+.|||.|..|...|..|.+. |++|.+.++.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-GVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4688999999999999999996 89999998753
No 412
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=85.35 E-value=1.4 Score=31.70 Aligned_cols=32 Identities=28% Similarity=0.422 Sum_probs=27.9
Q ss_pred EEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 32 FIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 32 ~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
++|.|+ |.-|..+|.+|.++ |++|.++.+...
T Consensus 4 vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r~~~ 36 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARA-GHTVIGIDRGQA 36 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred EEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCChh
Confidence 688886 88999999999996 999999988654
No 413
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=85.26 E-value=1.1 Score=36.57 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++-|||.|..|..+|..|+++ |++|.+.++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 3688999999999999999996 99999998854
No 414
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=85.23 E-value=1.2 Score=32.92 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=28.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCc-EEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWR-VLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~-VlvLE~G~ 63 (146)
..+.|||.|..|...|..|.+. |++ |.+.++..
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK-GFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCCH
Confidence 4699999999999999999997 888 88888753
No 415
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=85.19 E-value=0.76 Score=37.98 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=31.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.+-++||+|.|..|..+|.+|.+. ++.|+++|..+.
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~~-~~~vvvid~~~~ 161 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLESR-NHLFVVVTDNYD 161 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTTT-TCCEEEEESCHH
T ss_pred cCCeEEEECCChHHHHHHHHHHHC-CCCEEEEECCHH
Confidence 356899999999999999999996 999999998643
No 416
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.03 E-value=1.2 Score=35.26 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.-.++|+|+|..|..+|..+... |.+|++.++..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM-GATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 34799999999999999999886 88999998753
No 417
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=84.86 E-value=0.84 Score=38.78 Aligned_cols=35 Identities=17% Similarity=0.357 Sum_probs=31.3
Q ss_pred cEEEEC--CCHHHHHHHHHHHHhCCCcEEEEecCCCCC
Q psy3408 31 DFIIVG--GGSAGAVLANRLSEELDWRVLLIEAGGDPP 66 (146)
Q Consensus 31 D~iIIG--~G~aG~~~A~~L~~~~g~~VlvLE~G~~~~ 66 (146)
+++||| +|..|+-+|..|++. +.+|.++|+.+...
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~-g~~Vtlv~~~~~l~ 561 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQK-GYEVSIVTPGAQVS 561 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHT-TCEEEEEESSSSTT
T ss_pred EEEEEcCCCCccHHHHHHHHHhC-CCeeEEEecccccc
Confidence 599999 999999999999996 99999999987643
No 418
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=84.83 E-value=1.2 Score=33.50 Aligned_cols=33 Identities=21% Similarity=0.345 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
..+.|||+|..|..+|..|.+. |.+|.+.++..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~-g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE-GAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 4699999999999999999997 78999998763
No 419
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=84.80 E-value=1.4 Score=33.46 Aligned_cols=35 Identities=20% Similarity=0.371 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.-.++|+|+|-+|..+|..|.+. |.+|.|..|-..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~-G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ-GLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 34789999999999999999997 799999988654
No 420
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=84.64 E-value=1.2 Score=34.54 Aligned_cols=32 Identities=25% Similarity=0.421 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAG 62 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G 62 (146)
-.+.|||+|..|..+|..|+++ ++ .|.++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~-g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK-ELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEecc
Confidence 4689999999999999999996 88 89999886
No 421
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=84.64 E-value=1.2 Score=34.96 Aligned_cols=32 Identities=22% Similarity=0.251 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||.|..|..+|..|.+. |++|.+.++.+
T Consensus 10 kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAA-NHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 588999999999999999996 99999998764
No 422
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=84.39 E-value=1.4 Score=33.41 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.-.+.|||.|..|..+|..|... |.+|++.++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAAL-GAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 45799999999999999999886 89999998764
No 423
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=84.38 E-value=1.1 Score=34.13 Aligned_cols=34 Identities=12% Similarity=0.135 Sum_probs=29.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~ 63 (146)
.-.++|+|+|-+|..+|..|.+. |. +|.|..|-.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~-G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLST-AAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 34699999999999999999996 76 899987753
No 424
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=84.35 E-value=1.4 Score=36.18 Aligned_cols=35 Identities=14% Similarity=0.214 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
..++-|||.|..|..+|..|+++ |++|.+.++.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~-G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH-GFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 45789999999999999999996 999999988653
No 425
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=84.34 E-value=0.84 Score=39.29 Aligned_cols=33 Identities=15% Similarity=0.255 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.+-|||+|..|...|..|+++ |+.|++.|+.+
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASK-GTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhC-CCEEEEEECCH
Confidence 3688999999999999999996 99999998753
No 426
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=84.33 E-value=1.2 Score=34.18 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=29.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCC--cEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDW--RVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G~ 63 (146)
...+.|||+|..|...|..|+.+ +. .+.|+|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAK-GIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCc
Confidence 45799999999999999999986 77 899998864
No 427
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=84.24 E-value=1.5 Score=32.70 Aligned_cols=32 Identities=25% Similarity=0.579 Sum_probs=28.4
Q ss_pred EEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 32 FIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 32 ~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
++|.|+ |.-|..++.+|.++ |++|.++.+...
T Consensus 3 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 35 (312)
T 3ko8_A 3 IVVTGGAGFIGSHLVDKLVEL-GYEVVVVDNLSS 35 (312)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEECCCSS
T ss_pred EEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCC
Confidence 789998 99999999999996 999999987543
No 428
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=84.21 E-value=1.4 Score=33.43 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.-.+.|||.|..|..+|..|... |.+|++.++-.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 44799999999999999999986 89999998754
No 429
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=84.13 E-value=1.3 Score=34.07 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=28.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~ 63 (146)
..+.|||+|..|...|..|+.. ++ +|.++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~-g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK-ELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 3589999999999999999986 75 899998753
No 430
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=84.11 E-value=1.2 Score=36.80 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.-.++|+|+|..|..+|..|+.. |.+|++.|+.+
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~-GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQA-GARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 44689999999999999999996 99999998753
No 431
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=84.07 E-value=1.4 Score=35.82 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++-|||.|..|..+|..|+++ |++|.+.++..
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~-G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR-GYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 5799999999999999999996 99999998753
No 432
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=84.06 E-value=1.5 Score=32.95 Aligned_cols=33 Identities=30% Similarity=0.373 Sum_probs=28.9
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|.|+ |.-|..++.+|.++ |++|.++.+...
T Consensus 5 ~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~ 38 (345)
T 2z1m_A 5 RALITGIRGQDGAYLAKLLLEK-GYEVYGADRRSG 38 (345)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCCS
T ss_pred EEEEECCCChHHHHHHHHHHHC-CCEEEEEECCCc
Confidence 4889997 99999999999996 999999988643
No 433
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=83.93 E-value=1 Score=35.86 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=27.5
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||.|..|..+|..|++ |++|.++++.+
T Consensus 2 kI~VIG~G~vG~~~A~~La~--G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL--QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT--TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC--CCEEEEEECCH
Confidence 47899999999999999997 79999998753
No 434
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=83.90 E-value=0.53 Score=36.22 Aligned_cols=32 Identities=16% Similarity=0.149 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|+|.|..|..+|.+|.++ |+ |+++|+.+.
T Consensus 117 ~viI~G~G~~g~~l~~~L~~~-g~-v~vid~~~~ 148 (336)
T 1lnq_A 117 HVVICGWSESTLECLRELRGS-EV-FVLAEDENV 148 (336)
T ss_dssp EEEEESCCHHHHHHHTTGGGS-CE-EEEESCGGG
T ss_pred CEEEECCcHHHHHHHHHHHhC-Cc-EEEEeCChh
Confidence 699999999999999999986 88 999998653
No 435
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=83.77 E-value=0.94 Score=33.30 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=28.0
Q ss_pred ccEEEECC-CH-HHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGG-GS-AGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~-G~-aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
--++|.|+ |. -|..+|.+|+++ |.+|+++.+..
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~ 57 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHE 57 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCH
Confidence 35889998 75 899999999997 99999998753
No 436
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=83.74 E-value=1.5 Score=33.00 Aligned_cols=32 Identities=22% Similarity=0.226 Sum_probs=28.3
Q ss_pred ccEEEEC-CCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 30 FDFIIVG-GGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 30 ~D~iIIG-~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
-.++|+| +|-.|..+|..|++. |.+|.++.|.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-cCEEEEEECC
Confidence 4689999 899999999999997 8899998775
No 437
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=83.60 E-value=1.5 Score=32.07 Aligned_cols=32 Identities=9% Similarity=0.301 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCC----cEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDW----RVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~----~VlvLE~G~ 63 (146)
.+.|||.|..|...|..|.++ |+ +|.+.++.+
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~-g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINK-NIVSSNQIICSDLNT 39 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TSSCGGGEEEECSCH
T ss_pred eEEEECccHHHHHHHHHHHhC-CCCCCCeEEEEeCCH
Confidence 588999999999999999996 87 999998864
No 438
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=83.53 E-value=1.3 Score=31.36 Aligned_cols=33 Identities=27% Similarity=0.424 Sum_probs=29.0
Q ss_pred cEEEEC-CCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVG-GGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG-~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|.| +|.-|..++.+|.++ |++|.++.|...
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~R~~~ 35 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTT-DYQIYAGARKVE 35 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTS-SCEEEEEESSGG
T ss_pred eEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCcc
Confidence 378999 799999999999996 999999998754
No 439
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=83.15 E-value=1.7 Score=33.64 Aligned_cols=32 Identities=28% Similarity=0.316 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||.|..|...|..|++. |++|.+.++.+
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~-G~~V~~~~~~~ 49 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDS-GVDVTVGLRSG 49 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECCTT
T ss_pred EEEEECchHHHHHHHHHHHHC-cCEEEEEECCh
Confidence 588999999999999999996 89999988754
No 440
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=83.02 E-value=1.7 Score=30.76 Aligned_cols=32 Identities=22% Similarity=0.274 Sum_probs=27.8
Q ss_pred EEEEC-CCHHHHHHHHHHH-HhCCCcEEEEecCCC
Q psy3408 32 FIIVG-GGSAGAVLANRLS-EELDWRVLLIEAGGD 64 (146)
Q Consensus 32 ~iIIG-~G~aG~~~A~~L~-~~~g~~VlvLE~G~~ 64 (146)
++|.| +|.-|..+|.+|. +. |++|.++.|...
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~~ 41 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYT-DMHITLYGRQLK 41 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHC-CCEEEEEESSHH
T ss_pred EEEEeCCcHHHHHHHHHHHhcC-CceEEEEecCcc
Confidence 89999 5999999999999 65 999999988644
No 441
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=83.00 E-value=1.7 Score=32.27 Aligned_cols=32 Identities=25% Similarity=0.369 Sum_probs=28.6
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||+|..|..+|..|.+. |.+|.+.++-.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-GLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 799999999999999999986 77999998753
No 442
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=82.97 E-value=1.4 Score=35.78 Aligned_cols=33 Identities=30% Similarity=0.331 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
.-.++|||+|..|...+..|.+. |.+|.|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~-ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEA-GARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-cCEEEEEcCC
Confidence 34689999999999999999996 9999999874
No 443
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=82.84 E-value=1.2 Score=31.66 Aligned_cols=33 Identities=18% Similarity=0.401 Sum_probs=29.2
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|.|+ |.-|..++.+|.++ |++|.++.|...
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 39 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNR-GFEVTAVVRHPE 39 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCGG
T ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCcc
Confidence 5899995 99999999999996 999999998754
No 444
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=82.76 E-value=1.9 Score=32.67 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=29.7
Q ss_pred ccEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
-.++|.|+ |.-|..++.+|.++ |++|.++.+...
T Consensus 26 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 60 (351)
T 3ruf_A 26 KTWLITGVAGFIGSNLLEKLLKL-NQVVIGLDNFST 60 (351)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSS
T ss_pred CeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 46899995 99999999999996 999999998643
No 445
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=82.65 E-value=1.2 Score=36.09 Aligned_cols=34 Identities=15% Similarity=0.298 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhC-CCcEEEEecCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEEL-DWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~-g~~VlvLE~G~ 63 (146)
..+.|||.|..|..+|..|+++. |++|.++++..
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36899999999999999999953 68999998753
No 446
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=82.52 E-value=2.1 Score=32.21 Aligned_cols=34 Identities=18% Similarity=0.365 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC---cEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW---RVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~---~VlvLE~G~~ 64 (146)
..+.|||+|..|...|..|.++ |+ +|.+.++...
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~-g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN-GYDPNRICVTNRSLD 40 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT-TCCGGGEEEECSSSH
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCCCCeEEEEeCCHH
Confidence 4688999999999999999996 78 8999988653
No 447
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=82.48 E-value=2 Score=32.50 Aligned_cols=33 Identities=24% Similarity=0.473 Sum_probs=28.9
Q ss_pred ccEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.++|.|+ |.-|..++.+|.++ |++|.++.+..
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~-g~~V~~~~r~~ 54 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQ-GHEILVIDNFA 54 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGG-TCEEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 36899987 99999999999997 99999998853
No 448
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=82.43 E-value=1.6 Score=34.56 Aligned_cols=34 Identities=15% Similarity=0.328 Sum_probs=29.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
..-.++|+|.|..|..+|..|.+. |.+|++.++-
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~-GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTE-GAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 345699999999999999999996 9999988753
No 449
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=82.31 E-value=1.2 Score=33.59 Aligned_cols=31 Identities=19% Similarity=0.458 Sum_probs=27.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
-.++|+|+|-.|..+|..|++. | +|.+..|.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~-G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKD-N-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSS-S-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHC-C-CEEEEECC
Confidence 3699999999999999999996 8 99998775
No 450
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=82.14 E-value=1.5 Score=32.69 Aligned_cols=31 Identities=13% Similarity=0.415 Sum_probs=26.5
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
.++|.|+ |.-|..++.+|.++ |++|.++.+.
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~ 35 (315)
T 2ydy_A 4 RVLVTGATGLLGRAVHKEFQQN-NWHAVGCGFR 35 (315)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-TCEEEEEC--
T ss_pred eEEEECCCcHHHHHHHHHHHhC-CCeEEEEccC
Confidence 4889997 99999999999996 9999999864
No 451
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=82.04 E-value=0.45 Score=35.46 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=28.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
..+.|||.|.-|..+|..|.++ |++|..+++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~-G~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSV-GHYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHT-TCEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHC-CCEEEEecCH
Confidence 4689999999999999999996 9999998763
No 452
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=82.00 E-value=2.1 Score=32.91 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=29.1
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|.|+ |.-|..++.+|.++ |++|.++.+...
T Consensus 30 ~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~r~~~ 63 (381)
T 1n7h_A 30 IALITGITGQDGSYLTEFLLGK-GYEVHGLIRRSS 63 (381)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCS
T ss_pred eEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCCc
Confidence 5899997 99999999999996 999999988643
No 453
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=81.93 E-value=2 Score=32.07 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~ 63 (146)
.++|||+|-+|..++..|.+. |. +|.|..|-.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-GVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 899999999999999999996 76 899998864
No 454
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=81.89 E-value=2.1 Score=33.45 Aligned_cols=35 Identities=20% Similarity=0.421 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.-.+.|||+|..|..++..+.+. |.+|++++..++
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~-G~~vi~~d~~~~ 48 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEM-GYKIAVLDPTKN 48 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCCC
Confidence 34799999999999999999986 999999997654
No 455
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=81.88 E-value=2 Score=32.79 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
-.++|+|+|..|..++..+++..+.+|+.++..+.
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~ 199 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQD 199 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHH
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHH
Confidence 36899999999999888887766889999987643
No 456
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=81.73 E-value=2.2 Score=32.07 Aligned_cols=33 Identities=18% Similarity=0.376 Sum_probs=29.2
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|.|+ |.-|..++.+|.++ |++|.++.+...
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 48 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAA-GHDLVLIHRPSS 48 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-TCEEEEEECTTS
T ss_pred EEEEECCCcHHHHHHHHHHHHC-CCEEEEEecChH
Confidence 5899995 99999999999996 999999998654
No 457
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=81.67 E-value=1.5 Score=38.10 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
--.+-|||+|..|.-.|..++.+ |+.|+++|..+
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~a-G~~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARV-GISVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHhC-CCchhcccchH
Confidence 34788999999999999999996 99999998764
No 458
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=81.61 E-value=2.4 Score=32.48 Aligned_cols=35 Identities=31% Similarity=0.578 Sum_probs=30.3
Q ss_pred ccEEEEC-CCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVG-GGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG-~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
-.++|.| +|.-|..++.+|.+++|++|.++.+...
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 60 (372)
T 3slg_A 25 KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTD 60 (372)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChh
Confidence 4699999 5999999999999865899999998754
No 459
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=81.49 E-value=2 Score=32.19 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=28.2
Q ss_pred ccEEEECC-CHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 30 FDFIIVGG-GSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 30 ~D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
-.++|.|+ |.-|..++.+|.++ |++|.++.+.
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~ 44 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEH-GYKVRGTARS 44 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 35899997 99999999999996 9999998774
No 460
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=81.49 E-value=2.2 Score=31.56 Aligned_cols=32 Identities=25% Similarity=0.538 Sum_probs=27.9
Q ss_pred EEEECC-CHHHHHHHHHHHHhCC-CcEEEEecCCC
Q psy3408 32 FIIVGG-GSAGAVLANRLSEELD-WRVLLIEAGGD 64 (146)
Q Consensus 32 ~iIIG~-G~aG~~~A~~L~~~~g-~~VlvLE~G~~ 64 (146)
++|.|+ |.-|..++.+|.++ | ++|.++.+...
T Consensus 2 vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~ 35 (310)
T 1eq2_A 2 IIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKD 35 (310)
T ss_dssp EEEETTTSHHHHHHHHHHHTT-TCCCEEEEECCSS
T ss_pred EEEEcCccHHHHHHHHHHHHC-CCcEEEEEccCCC
Confidence 688997 99999999999996 8 99999987643
No 461
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=81.47 E-value=2.3 Score=33.26 Aligned_cols=35 Identities=23% Similarity=0.522 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
...+.|||+|.-|..++..+.+. |.+|++++..++
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~l-G~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKM-GYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCC
Confidence 44799999999999999999986 999999998654
No 462
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=81.46 E-value=2.6 Score=30.09 Aligned_cols=33 Identities=30% Similarity=0.465 Sum_probs=28.8
Q ss_pred cEEEEC-CCHHHHHHHHHHHHhCCC--cEEEEecCCC
Q psy3408 31 DFIIVG-GGSAGAVLANRLSEELDW--RVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG-~G~aG~~~A~~L~~~~g~--~VlvLE~G~~ 64 (146)
.++|.| +|.-|..++.+|.++ |+ +|.++.+...
T Consensus 20 ~vlVtGasg~iG~~l~~~L~~~-G~~~~V~~~~r~~~ 55 (242)
T 2bka_A 20 SVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKL 55 (242)
T ss_dssp EEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEESSCC
T ss_pred eEEEECCCcHHHHHHHHHHHcC-CCCCEEEEEEcCCC
Confidence 589999 589999999999997 88 9999988654
No 463
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=81.37 E-value=1.1 Score=35.93 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=25.8
Q ss_pred CCcccEEEECCCHHHH-HHHHHHHHhCCCcE-EEEecC
Q psy3408 27 SGKFDFIIVGGGSAGA-VLANRLSEELDWRV-LLIEAG 62 (146)
Q Consensus 27 ~~~~D~iIIG~G~aG~-~~A~~L~~~~g~~V-lvLE~G 62 (146)
+....+.|||.|..|. ..+..|.+.++.++ .|.++.
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~ 118 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGN 118 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSC
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCC
Confidence 4467899999999996 77777776545554 466654
No 464
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=81.28 E-value=1.6 Score=32.45 Aligned_cols=31 Identities=19% Similarity=0.300 Sum_probs=27.5
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||.|..|...|..|.+ |++|.+.++.+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~--g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR--RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT--TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC--CCeEEEEeCCH
Confidence 47899999999999999987 78999998764
No 465
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=81.27 E-value=1.6 Score=31.97 Aligned_cols=32 Identities=13% Similarity=0.246 Sum_probs=28.4
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.+.|||.|..|...|..|.+. |+.|.+.++..
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~-g~~v~~~~~~~ 36 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQT-PHELIISGSSL 36 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTS-SCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEECCCH
Confidence 688999999999999999986 88999998753
No 466
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=81.22 E-value=2.3 Score=32.41 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=29.8
Q ss_pred ccEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.++|.|+ |.-|..++.+|.++ |++|.++.|..
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~ 44 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDA-HRPTYILARPG 44 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHT-TCCEEEEECSS
T ss_pred CeEEEECCCcHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 46999998 99999999999996 89999998865
No 467
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=81.15 E-value=1.2 Score=33.23 Aligned_cols=29 Identities=17% Similarity=0.281 Sum_probs=26.8
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEe
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIE 60 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE 60 (146)
.+.|||.|..|...|..|.+. |++|.+.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARA-GHQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHT-TCEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhC-CCEEEEEc
Confidence 588999999999999999996 99999987
No 468
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=81.11 E-value=1.6 Score=35.36 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
..+.|||.|..|..+|..|++ |++|+++++.+.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ--NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc--CCeEEEEecCHH
Confidence 368899999999999999986 899999988643
No 469
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=81.02 E-value=2.4 Score=31.68 Aligned_cols=34 Identities=9% Similarity=0.189 Sum_probs=24.8
Q ss_pred cEEEECCCHHH-HHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 31 DFIIVGGGSAG-AVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 31 D~iIIG~G~aG-~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
.++|||+|..+ .-+|..+.+ .+.+|++++++...
T Consensus 148 ~~~VIggG~~~~~e~a~~~~~-~~~~v~i~~~~~~~ 182 (304)
T 4fk1_A 148 PLIIISENEDHTLHMTKLVYN-WSTDLVIATNGNEL 182 (304)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TCSCEEEECSSCCC
T ss_pred ceeeecCCCchhhhHHHHHHh-CCceEEEEeccccc
Confidence 67888888654 556666666 48999999988654
No 470
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=81.00 E-value=2 Score=32.91 Aligned_cols=32 Identities=19% Similarity=0.179 Sum_probs=27.7
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCC--cEEEEecCC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDW--RVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G~ 63 (146)
.+.|||+|..|..+|..|++. ++ .+.++|.-.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-LDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-SCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCh
Confidence 478999999999999999996 77 899988754
No 471
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=80.79 E-value=2.4 Score=32.24 Aligned_cols=32 Identities=25% Similarity=0.305 Sum_probs=28.7
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++|.|+ |.-|..++.+|.++ |++|.++.+..
T Consensus 29 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 61 (352)
T 1sb8_A 29 VWLITGVAGFIGSNLLETLLKL-DQKVVGLDNFA 61 (352)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCS
T ss_pred eEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 5899998 99999999999997 99999998854
No 472
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=80.74 E-value=2.2 Score=31.85 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=28.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhC-CCcEEEEecC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEEL-DWRVLLIEAG 62 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~-g~~VlvLE~G 62 (146)
..+.|||.|..|...|..|.++. +.+|.+.++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 46899999999999999999852 5789988764
No 473
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=80.68 E-value=1.9 Score=32.00 Aligned_cols=32 Identities=16% Similarity=0.302 Sum_probs=28.6
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++|+|+ |.-|..++.+|.++ |++|.++.|..
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~ 38 (308)
T 1qyc_A 6 RILLIGATGYIGRHVAKASLDL-GHPTFLLVRES 38 (308)
T ss_dssp CEEEESTTSTTHHHHHHHHHHT-TCCEEEECCCC
T ss_pred EEEEEcCCcHHHHHHHHHHHhC-CCCEEEEECCc
Confidence 5899997 99999999999996 89999998864
No 474
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=80.65 E-value=3.3 Score=33.06 Aligned_cols=37 Identities=16% Similarity=0.113 Sum_probs=32.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~~ 65 (146)
+...++|+|+|.-+..+|.-++.. |++|.|+|..+..
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~l-g~~V~v~D~R~~~ 239 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFL-GYRVTVCDARPVF 239 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHT-TCEEEEEESCTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEECCchhh
Confidence 567999999999999999988885 9999999987654
No 475
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=80.63 E-value=2.1 Score=32.10 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=28.7
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++|.|+ |.-|..++.+|.++ |++|.++.|..
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 38 (321)
T 3c1o_A 6 KIIIYGGTGYIGKFMVRASLSF-SHPTFIYARPL 38 (321)
T ss_dssp CEEEETTTSTTHHHHHHHHHHT-TCCEEEEECCC
T ss_pred EEEEEcCCchhHHHHHHHHHhC-CCcEEEEECCc
Confidence 4899996 99999999999996 89999998875
No 476
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=80.57 E-value=2.5 Score=32.82 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~~ 64 (146)
...+.|||+|..|..+|..|+.. ++ .+.++|.-..
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~-~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK-ELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCch
Confidence 44789999999999999999996 77 8999988653
No 477
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=80.55 E-value=2.3 Score=33.41 Aligned_cols=37 Identities=14% Similarity=0.287 Sum_probs=30.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 28 ~~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
....++|||+|-.|+.+|..|+..+=.++.|++....
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 3568999999999999999999973347788888753
No 478
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=80.48 E-value=2.7 Score=32.58 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=29.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~~ 64 (146)
...+.|||+|..|..+|..|+.. +. .+.++|.-..
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~-~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIK-QLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCceEEEEeCChH
Confidence 34689999999999999999985 66 8999987653
No 479
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=80.36 E-value=2.1 Score=31.75 Aligned_cols=32 Identities=13% Similarity=0.153 Sum_probs=28.5
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++|.|+ |.-|..++.+|.++ |++|.++.|..
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 36 (307)
T 2gas_A 4 KILILGPTGAIGRHIVWASIKA-GNPTYALVRKT 36 (307)
T ss_dssp CEEEESTTSTTHHHHHHHHHHH-TCCEEEEECCS
T ss_pred EEEEECCCchHHHHHHHHHHhC-CCcEEEEECCC
Confidence 4899997 99999999999997 89999998864
No 480
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=80.36 E-value=2.7 Score=31.60 Aligned_cols=33 Identities=30% Similarity=0.473 Sum_probs=28.2
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++|.|+ |.-|..++.+|.+++|++|.++.+..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 35 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS 35 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCC
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3789997 99999999999985479999998864
No 481
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=80.34 E-value=2.3 Score=32.21 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=29.0
Q ss_pred ccEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 30 FDFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 30 ~D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-.++|.|+ |.-|..++.+|.++ |++|.++.+..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 61 (343)
T 2b69_A 28 KRILITGGAGFVGSHLTDKLMMD-GHEVTVVDNFF 61 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCS
T ss_pred CEEEEEcCccHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 46899997 99999999999996 99999998753
No 482
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=80.27 E-value=2.2 Score=33.23 Aligned_cols=32 Identities=19% Similarity=0.367 Sum_probs=27.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCC--cEEEEecC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDW--RVLLIEAG 62 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G 62 (146)
..+.|||+|..|..+|..|++. +. .+.++|.-
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~-~~~~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ-GITDELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCceEEEEecc
Confidence 4689999999999999999986 65 78998864
No 483
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=80.17 E-value=2 Score=35.42 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.-.++|||.|..|..+|..+... |.+|++.|+.+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 44799999999999999999886 89999999754
No 484
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=80.12 E-value=2.6 Score=30.23 Aligned_cols=32 Identities=13% Similarity=0.209 Sum_probs=27.3
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
-++|.|+ |.-|..+|.+|+++ |.+|+++.+..
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~ 41 (244)
T 1cyd_A 9 RALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTN 41 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4788887 78899999999996 99999998753
No 485
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=80.06 E-value=2.4 Score=32.81 Aligned_cols=33 Identities=12% Similarity=0.229 Sum_probs=28.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAG 62 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G 62 (146)
.-.++|+|+|-+|..+|..|++. |. +|.|+.|-
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~-Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALD-GVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHC-CCCEEEEEECC
Confidence 34799999999999999999996 76 89998886
No 486
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=79.99 E-value=2.7 Score=31.70 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=27.1
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
.++|.|+ |.-|..++.+|.++ |++|.++.+.
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~ 35 (348)
T 1ek6_A 4 KVLVTGGAGYIGSHTVLELLEA-GYLPVVIDNF 35 (348)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCCEEEEECS
T ss_pred EEEEECCCCHHHHHHHHHHHHC-CCEEEEEecC
Confidence 4788984 99999999999996 9999999764
No 487
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=79.96 E-value=2.2 Score=33.97 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~ 63 (146)
.-.++|||+|..|..+|..|... |. +|++.++..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~-G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR-GVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH-CCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 34699999999999999999986 77 899998754
No 488
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=79.92 E-value=2.3 Score=32.84 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=27.9
Q ss_pred EEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 32 FIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 32 ~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
++|+|+|..|...+..+.+. |++|++++.++.
T Consensus 2 iliiG~g~~g~~~~~a~~~~-G~~v~~~~~~~~ 33 (369)
T 3aw8_A 2 IGILGGGQLGRMLALAGYPL-GLSFRFLDPSPE 33 (369)
T ss_dssp EEEECCSHHHHHHHHHHTTB-TCCEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHHc-CCEEEEEeCCCC
Confidence 78999999999999998886 999999997643
No 489
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=79.88 E-value=2.9 Score=31.34 Aligned_cols=32 Identities=25% Similarity=0.512 Sum_probs=27.5
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGG 63 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~ 63 (146)
.++|.|+ |.-|..++.+|.++ |++|.++.+..
T Consensus 3 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 35 (330)
T 2c20_A 3 SILICGGAGYIGSHAVKKLVDE-GLSVVVVDNLQ 35 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCS
T ss_pred EEEEECCCcHHHHHHHHHHHhC-CCEEEEEeCCC
Confidence 3788875 99999999999996 99999998753
No 490
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=79.85 E-value=2.8 Score=32.42 Aligned_cols=33 Identities=24% Similarity=0.320 Sum_probs=29.4
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|.|+ |.-|..++.+|.++ |++|.++.+...
T Consensus 31 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 64 (379)
T 2c5a_A 31 KISITGAGGFIASHIARRLKHE-GHYVIASDWKKN 64 (379)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred eEEEECCccHHHHHHHHHHHHC-CCeEEEEECCCc
Confidence 5899998 99999999999996 999999988654
No 491
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=79.79 E-value=2.7 Score=32.59 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
..+.|||.|..|..+|..|+.. |.+|++.++...
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d~~~~ 184 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGF-NMRILYYSRTRK 184 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCEEEEECCCcc
Confidence 4689999999999999999986 999999987643
No 492
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=79.70 E-value=2.5 Score=32.61 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=28.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCC--cEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDW--RVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~--~VlvLE~G~ 63 (146)
...+.|||+|..|..+|..|+.. +. .+.++|.-.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~-~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR-QTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 35799999999999999999996 66 799998754
No 493
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=79.58 E-value=2.5 Score=31.69 Aligned_cols=33 Identities=15% Similarity=0.269 Sum_probs=29.2
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCCCcEEEEecCCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELDWRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g~~VlvLE~G~~ 64 (146)
.++|+|+ |.-|..++.+|.++ |++|.++.|...
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~ 46 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKL-GHPTYVFTRPNS 46 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHT-TCCEEEEECTTC
T ss_pred eEEEECCCchHHHHHHHHHHHC-CCcEEEEECCCC
Confidence 5999996 99999999999996 899999988653
No 494
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=79.51 E-value=3.1 Score=30.85 Aligned_cols=33 Identities=24% Similarity=0.526 Sum_probs=28.9
Q ss_pred cEEEECC-CHHHHHHHHHHHHhCC-CcEEEEecCCC
Q psy3408 31 DFIIVGG-GSAGAVLANRLSEELD-WRVLLIEAGGD 64 (146)
Q Consensus 31 D~iIIG~-G~aG~~~A~~L~~~~g-~~VlvLE~G~~ 64 (146)
.++|.|+ |.-|..++.+|.++ | ++|.++.|.+.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~-g~~~V~~~~R~~~ 41 (299)
T 2wm3_A 7 LVVVFGGTGAQGGSVARTLLED-GTFKVRVVTRNPR 41 (299)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-CSSEEEEEESCTT
T ss_pred EEEEECCCchHHHHHHHHHHhc-CCceEEEEEcCCC
Confidence 5899998 99999999999997 7 99999988643
No 495
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=79.50 E-value=2.5 Score=32.16 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=28.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~ 63 (146)
.-.++|+|+|-+|..++..|++. |. +|.|+.|-.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~-G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTH-GVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCCEEEEEECCH
Confidence 34799999999999999999996 76 699887753
No 496
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=79.43 E-value=3 Score=31.80 Aligned_cols=34 Identities=24% Similarity=0.446 Sum_probs=29.0
Q ss_pred ccEEEECC-CHHHHHHHHHHHHhCC-CcEEEEecCCC
Q psy3408 30 FDFIIVGG-GSAGAVLANRLSEELD-WRVLLIEAGGD 64 (146)
Q Consensus 30 ~D~iIIG~-G~aG~~~A~~L~~~~g-~~VlvLE~G~~ 64 (146)
-.++|.|+ |.-|..++.+|.++ | ++|.++.+...
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~ 82 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKD 82 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHT-TCCCEEEEECCSS
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCcEEEEEecCCC
Confidence 36899998 99999999999997 8 99999987643
No 497
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=79.37 E-value=1.5 Score=35.80 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=28.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 30 ~D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
-.++|+|+|..|..++..|++.++.+|.++.|.
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSTTEEEEEEESS
T ss_pred CEEEEECChHHHHHHHHHHHhCCCCeEEEEECC
Confidence 369999999999999999998657889998875
No 498
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=79.35 E-value=1.8 Score=32.84 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGGD 64 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~~ 64 (146)
.-.++|+|+|-+|..+|..|.+. |. +|.|..|-..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI-VRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT-CCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCHH
Confidence 44799999999999999999996 76 8999887643
No 499
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=79.31 E-value=2.3 Score=31.63 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=29.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhCCC-cEEEEecCC
Q psy3408 29 KFDFIIVGGGSAGAVLANRLSEELDW-RVLLIEAGG 63 (146)
Q Consensus 29 ~~D~iIIG~G~aG~~~A~~L~~~~g~-~VlvLE~G~ 63 (146)
...++|||.|-.|+.+|..|++. |. ++.|++...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 56899999999999999999996 65 778887764
No 500
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=79.30 E-value=1.8 Score=35.00 Aligned_cols=31 Identities=13% Similarity=0.223 Sum_probs=27.8
Q ss_pred cEEEECCCHHHHHHHHHHHHhCCCcEEEEecC
Q psy3408 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62 (146)
Q Consensus 31 D~iIIG~G~aG~~~A~~L~~~~g~~VlvLE~G 62 (146)
.++|+|+|..|...|..|++. |.+|.+.++.
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~-G~~V~v~~R~ 35 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDS-GIKVTVACRT 35 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTT-TCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhC-cCEEEEEECC
Confidence 588999999999999999985 8999998875
Done!