RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3408
(146 letters)
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 104 bits (260), Expect = 4e-28
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 26 ISGK-FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASEL---PGYWFNLLKS 81
++GK +D+II GGG G +A +L+E +VL+IE G + P + + +
Sbjct: 20 VAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGT 79
Query: 82 RQDWAYRTQPDNRMFFGLENRVNHWPRGKGLGGFPA 117
D Y T P + NR N+ GKGLGG
Sbjct: 80 TVDQNYLTVP------LINNRTNNIKAGKGLGGSTL 109
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 101 bits (252), Expect = 5e-27
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 24 DNISGK-FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASEL---PGYWFNLL 79
++SG+ D+II GGG G A RL+E + VL+IE+G + + + ++
Sbjct: 11 KDVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIF 70
Query: 80 KSRQDWAYRTQPDNRMFFGLENRVNHWPRGKGLGGFPAT 118
S D AY T N+ G GLGG
Sbjct: 71 GSSVDHAYETVE-----LATNNQTALIRSGNGLGGSTLV 104
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 90.3 bits (223), Expect = 5e-23
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 13 STVFTVVSTAEDNISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELP 72
S + + + G +D++IVGGG++G LA LSE ++VL++E G P +
Sbjct: 10 SYLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVL 67
Query: 73 GYWFNLLKSRQDWAYRTQPDNRMFFGLENRVNHWPRGK 110
+ +Q+ +T + + RG+
Sbjct: 68 TADGFVYNLQQEDDGKTPVER----FVSEDGIDNVRGR 101
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 83.5 bits (205), Expect = 2e-20
Identities = 13/97 (13%), Positives = 26/97 (26%), Gaps = 1/97 (1%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYR 88
K+D +IVG G G A L ++V + + G + + +
Sbjct: 4 KYDVVIVGSGPIGCTYARELVGA-GYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFV 62
Query: 89 TQPDNRMFFGLENRVNHWPRGKGLGGFPATGLIYSNH 125
++ + A+ N
Sbjct: 63 NVIQGQLMSVSVPVNTLVVDTLSPTSWQASTFFVRNG 99
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 71.6 bits (174), Expect = 3e-16
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELP-----GYWFNLLKSRQD 84
+D+IIVG G G + A+RLSE +VLL+E GG + + L K
Sbjct: 3 YDYIIVGAGPGGIIAADRLSEA-GKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIP 61
Query: 85 WAYRTQPDNRMFFGLENRVNHWPRGKGLGGFPA 117
+ + + + G +GG +
Sbjct: 62 GLFESLFTDSN-PFWWCKDITVFAGCLVGGGTS 93
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 70.3 bits (171), Expect = 1e-15
Identities = 14/105 (13%), Positives = 26/105 (24%), Gaps = 20/105 (19%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELP---------------- 72
+ +++G G GAV A RL++ ++E G
Sbjct: 7 RVPALVIGSGYGGAVAALRLTQA-GIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRSMWL 65
Query: 73 ---GYWFNLLKSRQDWAYRTQPDNRMFFGLENRVNHWPRGKGLGG 114
+ +G+G+GG
Sbjct: 66 ADKTDQPVSNFMGFGINKSIDRYVGVLDSERFSGIKVYQGRGVGG 110
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 67.3 bits (163), Expect = 1e-14
Identities = 20/108 (18%), Positives = 33/108 (30%), Gaps = 21/108 (19%)
Query: 28 GKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD----PPEASELPGYWFNLLKSRQ 83
G +++G G AV A RL E + L++E G P+ + G +S
Sbjct: 1 GYVPAVVIGTGYGAAVSALRLGEA-GVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSW 59
Query: 84 DWAYRTQPDNRMFF----------------GLENRVNHWPRGKGLGGF 115
P + + G+G+GG
Sbjct: 60 FKNRTEAPLGSFLWLDVVNRNIDPYAGVLDRVNYDQMSVYVGRGVGGG 107
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 45.6 bits (106), Expect = 4e-07
Identities = 9/60 (15%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Query: 25 NISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEAS---ELPGYWFNLLKS 81
++ ++D I++G G +L+ +S +VL ++ S + +
Sbjct: 2 HMDEEYDVIVLGTGLTECILSGIMS-VNGKKVLHMDRNPYYGGESSSITPLEELYKRFQL 60
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 44.6 bits (104), Expect = 7e-07
Identities = 13/84 (15%), Positives = 23/84 (27%)
Query: 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWA 86
S +D +++G GS G + RV +I+ +
Sbjct: 1 SRAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKK 60
Query: 87 YRTQPDNRMFFGLENRVNHWPRGK 110
N M E+ W +
Sbjct: 61 LMVTGANYMDTIRESAGFGWELDR 84
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 44.3 bits (103), Expect = 1e-06
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 2/84 (2%)
Query: 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWA 86
S KFD I++G G G V A + + +L + LIE E G + A
Sbjct: 1 SQKFDVIVIGAGPGGYVAAIKSA-QLGLKTALIEK-YKGKEGKTALGGTCLNVGCIPSKA 58
Query: 87 YRTQPDNRMFFGLENRVNHWPRGK 110
+++ G+
Sbjct: 59 LLDSSYKFHEAHESFKLHGISTGE 82
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 43.7 bits (102), Expect = 1e-06
Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Query: 26 ISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDW 85
I+ D +I+GGG AG V A + + +L + +E G G +
Sbjct: 2 INKSHDVVIIGGGPAGYVAAIKAA-QLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSH 60
Query: 86 AYRTQPDNRMFFGLENRVNHW 106
+ G++ +
Sbjct: 61 LFHQMHTEAQKRGIDVNGDIK 81
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 43.7 bits (102), Expect = 1e-06
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYR 88
+D++++GGGS G A R + EL R ++E+ + ++ + +
Sbjct: 3 SYDYLVIGGGSGGLASARRAA-ELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEF 61
Query: 89 TQPDNRMFFGLENRVNHWPRGK 110
F +W K
Sbjct: 62 MHDHADYGFPSCEGKFNWRVIK 83
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 43.5 bits (101), Expect = 2e-06
Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 1/97 (1%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYR 88
+D I++GGG +G + A + E VLL++ G + G + +R
Sbjct: 2 HYDVIVIGGGPSGLMAAIGAA-EEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEI 60
Query: 89 TQPDNRMFFGLENRVNHWPRGKGLGGFPATGLIYSNH 125
+ L + + + + F G+
Sbjct: 61 VKHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEE 97
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 43.6 bits (102), Expect = 2e-06
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEA 61
+D+IIVG G GAV AN L +L+ +VL+IE
Sbjct: 2 YDYIIVGSGLFGAVCANELK-KLNKKVLVIEK 32
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 380
Score = 42.5 bits (99), Expect = 5e-06
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 14/68 (20%)
Query: 12 ISTVFTVVSTAEDNI---------SGKFDFIIVGGGSAGAVLANRLS-----EELDWRVL 57
I+T +T+ +D + + D +IVG G AG A RL E D RV
Sbjct: 6 ITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVC 65
Query: 58 LIEAGGDP 65
L+E
Sbjct: 66 LVEKAAHI 73
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 42.0 bits (97), Expect = 7e-06
Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Query: 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASE--LPGYWFNLLKSRQDWAY 87
FD II+GGGS G A + + D +V++++ P + L G N+ + +
Sbjct: 4 FDLIIIGGGSGGLAAAKEAA-KFDKKVMVLDFVTPTPLGTNWGLGGTCVNVGCIPKKLMH 62
Query: 88 RTQPDNRMFFGLENRVNHWPR 108
+ + N
Sbjct: 63 QAALLGQALKDSRNYGWKLED 83
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 42.0 bits (97), Expect = 7e-06
Identities = 12/69 (17%), Positives = 19/69 (27%)
Query: 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWA 86
S FD +++G GS G A + RV +I+ +
Sbjct: 1 SKIFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKK 60
Query: 87 YRTQPDNRM 95
M
Sbjct: 61 LMVTGAQYM 69
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 297
Score = 41.0 bits (94), Expect = 2e-05
Identities = 14/83 (16%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEAS---ELPGYWFNLLKSRQDW 85
+D I++G G +L+ LS + +VL I+ + L + +Q+
Sbjct: 5 DYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGGEAASVTLSQLYEKF---KQNP 60
Query: 86 AYRTQPDNRMFFGLENRVNHWPR 108
+ + +++ + V+ P+
Sbjct: 61 ISKEERESKFGKDRDWNVDLIPK 83
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4
{Thale cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 40.6 bits (94), Expect = 2e-05
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65
+ D ++VG GSAG A +S+ + +V +IE P
Sbjct: 33 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSP 69
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 221
Score = 40.6 bits (94), Expect = 2e-05
Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWA 86
S + D +I+GGG G V A + + +L ++ IE G G +
Sbjct: 1 SDENDVVIIGGGPGGYVAAIKAA-QLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHM 59
Query: 87 YRTQPDNRMFFGLE 100
Y + G++
Sbjct: 60 YHEAKHSFANHGVK 73
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 40.5 bits (93), Expect = 2e-05
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEAS 69
S FD I+VG GS G +L+++ + LL++A P
Sbjct: 1 STHFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFDPPHTNG 42
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 40.4 bits (93), Expect = 2e-05
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62
+D I++GGGS G A R + + +V L+E
Sbjct: 2 YDLIVIGGGSGGMAAARRAA-RHNAKVALVEKS 33
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO
{Bacillus sp. [TaxId: 1409]}
Length = 276
Score = 39.7 bits (91), Expect = 4e-05
Identities = 10/41 (24%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEAS 69
++ +++GGG G+ +A L++E + L E+G +
Sbjct: 4 HYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGTMGGRTT 43
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 39.5 bits (91), Expect = 4e-05
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62
+D+I +GGGS G NR + + LIEA
Sbjct: 2 HYDYIAIGGGSGGIASINRAA-MYGQKCALIEAK 34
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 39.5 bits (91), Expect = 4e-05
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWA 86
S + II+G G+AG A +L+ +L V + + G + G F + +
Sbjct: 2 SQYSENIIIGAGAAGLFCAAQLA-KLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTP 60
Query: 87 YRTQPDN 93
N
Sbjct: 61 AHYLSQN 67
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide
dehydrogenase {Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 38.8 bits (89), Expect = 6e-05
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62
+ +I+GGG G V A R +L +L+E
Sbjct: 5 QTTLLIIGGGPGGYVAAIRAG-QLGIPTVLVEGQ 37
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 39.2 bits (90), Expect = 6e-05
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
Query: 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYRT 89
D +I+G G AG A + +V+L+E P ++L N +++
Sbjct: 24 TDVVIIGSGGAGLAAAVSARDA-GAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGI 82
Query: 90 QPDNRMFFGLENRVNHW 106
+ ++ +
Sbjct: 83 EDKKQIMIDDTMKGGRN 99
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 288
Score = 39.3 bits (90), Expect = 7e-05
Identities = 12/87 (13%), Positives = 23/87 (26%), Gaps = 1/87 (1%)
Query: 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYRT 89
D +I G G G A L + +V L+E+ + +++ +
Sbjct: 2 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGP 61
Query: 90 QPDNRMFFGLENRVNHWPRGKGLGGFP 116
G + P
Sbjct: 62 ALAATAIP-THELRYIDQSGATVWSEP 87
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter
sp., py2 [TaxId: 35809]}
Length = 261
Score = 39.2 bits (90), Expect = 7e-05
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 18 VVSTAEDNISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD 64
V+ ++N ++D I +GGG+AG + L + R L+++
Sbjct: 31 VIYNVDENDPREYDAIFIGGGAAGRFGSAYLR-AMGGRQLIVDRWPF 76
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 223
Score = 37.9 bits (87), Expect = 2e-04
Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYR 88
+ + ++VG G G V A R + +L +V ++E G + L S +
Sbjct: 3 ETETLVVGAGPGGYVAAIRAA-QLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQ 61
Query: 89 TQPDNRMFFGLENRVNHWPR 108
+ M EN + +
Sbjct: 62 AKHSEEMGIKAENVTIDFAK 81
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 38.0 bits (87), Expect = 2e-04
Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYR 88
++VG GSAG + + V+L++ S + N + ++Q A+
Sbjct: 19 TTQVLVVGAGSAGFNASLAAKKA-GANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHG 77
Query: 89 TQPDNRMFFGLENRVNHW 106
+ F +
Sbjct: 78 VEDKVEWFIEDAMKGGRQ 95
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 37.6 bits (86), Expect = 2e-04
Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGG 63
+D +++GGG G A + + +V ++E
Sbjct: 7 YDVVVLGGGPGGYSAAFAAA-DEGLKVAIVERYK 39
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 37.3 bits (85), Expect = 3e-04
Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
Query: 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYRT 89
D ++VG G AG A + + +V+LIE ++L N + Q A +
Sbjct: 17 VDVVVVGSGGAGFSAAISAT-DSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKI 75
Query: 90 QPDNRMFFGLENRVNHW 106
+ F +
Sbjct: 76 TDSPELMFEDTMKGGQN 92
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 37.1 bits (85), Expect = 4e-04
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 32 FIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62
+IVG G +GAV+ +L+ E +V +I+
Sbjct: 5 ILIVGAGFSGAVIGRQLA-EKGHQVHIIDQR 34
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase
{Soil-living yeast (Trichosporon cutaneum) [TaxId:
5554]}
Length = 360
Score = 35.5 bits (80), Expect = 0.001
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 31 DFIIVGGGSAGAVLANRLSEEL----DWRVLLIEAGGDPPEAS 69
D +IVG G AG + A LSE + D +V +I+
Sbjct: 9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNG 51
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate
hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 35.3 bits (80), Expect = 0.002
Identities = 8/42 (19%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASE 70
K I+G G +G +L L + +++E
Sbjct: 2 KTQVAIIGAGPSGLLLGQLLH-KAGIDNVILERQTPDYVLGR 42
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 34.7 bits (78), Expect = 0.002
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62
+I+G G G LA+ L + +++ G
Sbjct: 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG 34
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 34.1 bits (77), Expect = 0.003
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62
D +I+G G+AG LA RL+++ +V+++ G
Sbjct: 8 CDVLIIGSGAAGLSLALRLADQH--QVIVLSKG 38
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 33.9 bits (76), Expect = 0.003
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 31 DFIIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDPP 66
F+++GGG+A A + RVL++ + P
Sbjct: 6 PFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 42
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 34.0 bits (76), Expect = 0.004
Identities = 7/33 (21%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAG 62
D +++GGG AG A ++ +++
Sbjct: 6 CDSLVIGGGLAGLRAAVATQQK-GLSTIVLSLI 37
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 33.8 bits (75), Expect = 0.004
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65
I+VG G +G A RLSE +L++EA
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 36
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 311
Score = 33.7 bits (76), Expect = 0.005
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 30 FDFIIVGGGSAGAVLANRLSE-ELDWRVLLIEAGGDP 65
D IIVG GS+G A +++ D +V +IE+ P
Sbjct: 51 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 87
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 33.6 bits (75), Expect = 0.005
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPP---EASELPGYWFNL 78
+ +VGGG +G +A+ L +L+E+ L GY
Sbjct: 2 NVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARLGGAVGTHALAGYLVEQ 51
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 33.4 bits (75), Expect = 0.006
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 29 KFDFIIVGGGSAG---AVLANRLSEELDWRVLLIEAG 62
+ D +I+GGG +G A A ++ +V L+E
Sbjct: 21 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKA 57
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase
{Escherichia coli [TaxId: 562]}
Length = 311
Score = 33.4 bits (75), Expect = 0.006
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 29 KFDFIIVGGGSAGAVLANRLSE-ELDWRVLLIEAG 62
+ D IVG G AG A ++ + ++ LI
Sbjct: 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKV 39
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 33.2 bits (74), Expect = 0.007
Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 33 IIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65
+VGG +G A L + V + E P
Sbjct: 8 AVVGGSISGLTAALMLR-DAGVDVDVYERSPQP 39
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 33.2 bits (74), Expect = 0.009
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEA----GGDPPEASELPGYWFNL 78
D ++VGGG +G A L + V+++EA GG + +L
Sbjct: 1 DVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRVGGRTYTLRNQKVKYVDL 51
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 32.8 bits (73), Expect = 0.010
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 33 IIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65
+IVG G AG A L+ +V ++EA P
Sbjct: 34 VIVGAGMAGLSAAYVLA-GAGHQVTVLEASERP 65
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 32.9 bits (74), Expect = 0.010
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIE 60
+FD +++G G AG A ++S+ L+
Sbjct: 7 EFDAVVIGAGGAGMRAALQISQS-GQTCALLS 37
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 32.7 bits (73), Expect = 0.011
Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 6/80 (7%)
Query: 33 IIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASE-----LPGYWFNLLKSRQDWAY 87
+++G G G A L+ + + V ++ +S+ G + + D
Sbjct: 10 VVLGSGVIGLSSALILARK-GYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPR 68
Query: 88 RTQPDNRMFFGLENRVNHWP 107
+ + + F V
Sbjct: 69 QAKWEESTFKKWVELVPTGH 88
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 31.9 bits (72), Expect = 0.016
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 11/77 (14%)
Query: 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGD-------PPEASELPGYWF---NLL 79
+ +IVG G +GA A L+ + RV L+ D PP+ PG
Sbjct: 3 YQVLIVGAGFSGAETAFWLA-QKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDP 61
Query: 80 KSRQDWAYRTQPDNRMF 96
K + WA+ + +
Sbjct: 62 KDERVWAFHARAKYLLE 78
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 31.7 bits (71), Expect = 0.025
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 29 KFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65
+ D ++VG G +G RL E V +IE GD
Sbjct: 7 EVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAGDV 42
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 31.3 bits (69), Expect = 0.032
Identities = 10/75 (13%), Positives = 21/75 (28%)
Query: 33 IIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYRTQPD 92
++G G A A+ L+ + + E S F L ++ D
Sbjct: 8 ALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKD 67
Query: 93 NRMFFGLENRVNHWP 107
+ ++
Sbjct: 68 LGVKIICGKSLSENE 82
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 31.0 bits (68), Expect = 0.036
Identities = 10/76 (13%), Positives = 17/76 (22%), Gaps = 1/76 (1%)
Query: 33 IIVGGGSAGAVLANRLSEEL-DWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYRTQP 91
I++G G L D + E G S + +
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTG 63
Query: 92 DNRMFFGLENRVNHWP 107
+ G+ N
Sbjct: 64 EKMESRGVNVFSNTEI 79
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 31.3 bits (69), Expect = 0.037
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 33 IIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65
++G G +G A +L V + EA G
Sbjct: 5 AVIGAGVSGLAAAYKLK-IHGLNVTVFEAEGKA 36
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 233
Score = 30.8 bits (68), Expect = 0.044
Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 5/80 (6%)
Query: 33 IIVGGGSAGAVLANRLSE--ELDWRVLLIEA---GGDPPEASELPGYWFNLLKSRQDWAY 87
+I+GGG AG A + +V +I+ GG +P F +
Sbjct: 5 VILGGGPAGYEAALVAATSHPETTQVTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELR 64
Query: 88 RTQPDNRMFFGLENRVNHWP 107
R + +++
Sbjct: 65 RAPHLGFHIDFDDAKISLPQ 84
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 30.5 bits (67), Expect = 0.052
Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 2/64 (3%)
Query: 33 IIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYRTQP 91
++VGGG+ GA A + V LIE L + + +
Sbjct: 6 VVVGGGTGGATAAKYIKLADPSIEVTLIEP-NTDYYTCYLSNEVIGGDRKLESIKHGYDG 64
Query: 92 DNRM 95
Sbjct: 65 LRAH 68
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 30.0 bits (66), Expect = 0.090
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 33 IIVGGGSAGAVLANRLSEE-LDWRVLLIEAGGDP 65
I+G G +G V A L E +V L E G P
Sbjct: 8 AIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSP 41
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 449
Score = 29.5 bits (64), Expect = 0.12
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 33 IIVGGGSAGAVLANRLSEELDWRVLLIEAGGDP 65
II+G G +G A +L V L+EA
Sbjct: 9 IIIGSGVSGLAAARQLQ-SFGMDVTLLEARDRV 40
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite
reductase {Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 29.3 bits (64), Expect = 0.13
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 33 IIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYRTQ 90
+IVG G G LA +LS+ + V +I+ P + + ++ R +
Sbjct: 4 VIVGNGPGGFELAKQLSQ--TYEVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSL 59
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 29.0 bits (63), Expect = 0.17
Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Query: 31 DFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYRTQ 90
+ +IVG G AG +A L W + G LP L +
Sbjct: 5 NVVIVGTGLAGVEVAFGLR-ASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYL 63
Query: 91 PDNRMFFGLENRVNHWPR 108
+ ++ +
Sbjct: 64 RTPDAYAAQNIQLLGGTQ 81
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId:
1423]}
Length = 134
Score = 28.4 bits (62), Expect = 0.19
Identities = 5/20 (25%), Positives = 8/20 (40%)
Query: 32 FIIVGGGSAGAVLANRLSEE 51
F ++G G G + L
Sbjct: 3 FAVIGLGRFGGSIVKELHRM 22
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 28.2 bits (61), Expect = 0.29
Identities = 8/58 (13%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Query: 33 IIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYRTQ 90
+++G G A L + ++ L+ G + + P + + R
Sbjct: 7 VVLGAGLASVSFVAELR-QAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLD 63
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 27.9 bits (61), Expect = 0.36
Identities = 7/37 (18%), Positives = 12/37 (32%), Gaps = 1/37 (2%)
Query: 33 IIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEAS 69
+++G G G A + E VL +
Sbjct: 4 VVIGAGVIGLSTALCIHER-YHSVLQPLDVKVYADRF 39
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide
reductase subunit F (AhpF), C-terminal domains
{Escherichia coli [TaxId: 562]}
Length = 184
Score = 27.8 bits (60), Expect = 0.37
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 30 FDFIIVGGGSAGAVLANRLSEELDWRVLLIE 60
+D +IVG G AGA A + R L+
Sbjct: 2 YDVLIVGSGPAGAAAAIYSA-RKGIRTGLMG 31
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis
glycosyltransferase MurG {Escherichia coli [TaxId:
562]}
Length = 351
Score = 28.1 bits (61), Expect = 0.38
Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
Query: 32 FIIVGGGSAGAV-----LANRLSEELDWRVLLIEAGGDPPEASELPGYWFNL 78
+++ GG+ G V +A+ L + W+V + D EA +P + +
Sbjct: 3 LMVMAGGTGGHVFPGLAVAHHLMAQ-GWQVRWLGT-ADRMEADLVPKHGIEI 52
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 132
Score = 26.8 bits (58), Expect = 0.72
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 33 IIVGGGSAGAVLANRLSEE 51
II G G G LA LSE+
Sbjct: 4 IIAGIGRVGYTLAKSLSEK 22
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel
Kch {Escherichia coli [TaxId: 562]}
Length = 153
Score = 26.4 bits (57), Expect = 1.3
Identities = 4/20 (20%), Positives = 8/20 (40%)
Query: 32 FIIVGGGSAGAVLANRLSEE 51
FI+ G +L++
Sbjct: 6 FIVCGHSILAINTILQLNQR 25
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 25.9 bits (56), Expect = 1.5
Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 10/81 (12%)
Query: 31 DFIIVGGGSAG---AVLANRLSEELDWRVLLIEAG---GDPPEASELPGYWFNLLKSRQD 84
+I+G G AG AV A R + + +LI G +E+ + +
Sbjct: 7 KLLILGSGPAGYTAAVYAAR----ANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGP 62
Query: 85 WAYRTQPDNRMFFGLENRVNH 105
++ F E +H
Sbjct: 63 LLMERMHEHATKFETEIIFDH 83
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 192
Score = 26.0 bits (56), Expect = 1.7
Identities = 12/75 (16%), Positives = 20/75 (26%), Gaps = 7/75 (9%)
Query: 29 KFDFIIVGGGSAG---AVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDW 85
IVG G A A+ A R + + LL E A +++ +
Sbjct: 5 NTRLCIVGSGPAAHTAAIYAAR----AELKPLLFEGWMANDIAPGGQLTTTTDVENFPGF 60
Query: 86 AYRTQPDNRMFFGLE 100
+
Sbjct: 61 PEGILGVELTDKFRK 75
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 180
Score = 25.8 bits (55), Expect = 1.9
Identities = 11/75 (14%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Query: 34 IVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWAYRTQPDN 93
I+G G+ G+ L+ L + V + D + + +
Sbjct: 5 ILGAGAMGSALSVPLVDN-GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPE 63
Query: 94 RMFFGLENRVNHWPR 108
++ LEN
Sbjct: 64 QLEKCLENAEVVLLG 78
>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex,
C-terminal domain {Thermus aquaticus [TaxId: 271]}
Length = 126
Score = 25.2 bits (55), Expect = 2.3
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 33 IIVGGGSAGAVLANRLSEELDWRV 56
IVG G G+ LA+ + +
Sbjct: 7 CIVGMGRLGSALADYPGFGESFEL 30
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein
MthK {Archaeon Methanothermobacter thermautotrophicus
[TaxId: 145262]}
Length = 129
Score = 24.8 bits (53), Expect = 3.4
Identities = 6/46 (13%), Positives = 12/46 (26%), Gaps = 3/46 (6%)
Query: 32 FIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFN 77
+I G + L V ++ + + G F
Sbjct: 3 VVICGWSESTLECLRELRGS---EVFVLAEDENVRKKVLRSGANFV 45
>d1j7ja_ c.61.1.1 (A:) Hypoxanthine PRTase {Salmonella typhimurium
[TaxId: 90371]}
Length = 172
Score = 24.9 bits (54), Expect = 3.8
Identities = 5/33 (15%), Positives = 10/33 (30%)
Query: 22 AEDNISGKFDFIIVGGGSAGAVLANRLSEELDW 54
E + ++VG + L E+
Sbjct: 24 TERYKDSGSEMVLVGLLRGSFMFMADLCREVQV 56
>d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum
cardiophyllum) [TaxId: 160510]}
Length = 360
Score = 24.2 bits (51), Expect = 7.3
Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 2/89 (2%)
Query: 8 LLTLISTVFTVVSTAEDNISGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPE 67
L L + + + A+ ++ FD I G S G +L +S + A P
Sbjct: 24 LEFLEGQLQEMDNNADARLADYFDVIG--GTSTGGLLTAMISTPNENNRPFAAAKEIVPF 81
Query: 68 ASELPGYWFNLLKSRQDWAYRTQPDNRMF 96
E FN Y + ++
Sbjct: 82 YFEHGPQIFNPSGQILGPKYDGKYLMQVL 110
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase
{Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Length = 189
Score = 24.0 bits (51), Expect = 7.8
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 34 IVGGGSAGAVLANRLSE 50
+ G G+ G LA LS+
Sbjct: 12 VFGSGAFGTALAMVLSK 28
>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 172
Score = 24.1 bits (51), Expect = 7.9
Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 3/81 (3%)
Query: 27 SGKFDFIIVGGGSAGAVLANRLSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDWA 86
SGKF ++VG G AG+V L + L + E L S +D
Sbjct: 5 SGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSLDEVRQ---ISLEDAL 61
Query: 87 YRTQPDNRMFFGLENRVNHWP 107
+ D + +
Sbjct: 62 RSQEIDVAYICSESSSHEDYI 82
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein
{Human (Homo sapiens) [TaxId: 9606]}
Length = 185
Score = 23.8 bits (51), Expect = 9.1
Identities = 7/38 (18%), Positives = 16/38 (42%)
Query: 48 LSEELDWRVLLIEAGGDPPEASELPGYWFNLLKSRQDW 85
+ +L +E GG+ ++ W N + +D+
Sbjct: 142 SLLQHFPDILPLEYGGEEFSMEDICQEWTNFIMKSEDY 179
>d2enga_ b.52.1.1 (A:) Endoglucanase V (Eng V) {Humicola insolens
[TaxId: 34413]}
Length = 210
Score = 23.6 bits (51), Expect = 9.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 15 VFTVVSTAEDNISGKFDFIIVGGG 38
V ST D S FD I GGG
Sbjct: 105 VVQSTSTGGDLGSNHFDLNIPGGG 128
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.139 0.427
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 557,385
Number of extensions: 25135
Number of successful extensions: 153
Number of sequences better than 10.0: 1
Number of HSP's gapped: 129
Number of HSP's successfully gapped: 82
Length of query: 146
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 69
Effective length of database: 1,350,386
Effective search space: 93176634
Effective search space used: 93176634
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)