Your job contains 1 sequence.
>psy3409
MANRYYFVMVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMYLK
TIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTPIN
STYFDSKVNFLGRKFLTGN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3409
(139 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P0DI81 - symbol:TRAPPC2 "Trafficking protein pa... 401 2.4e-37 1
UNIPROTKB|P0DI82 - symbol:TRAPPC2P1 "Trafficking protein ... 401 2.4e-37 1
UNIPROTKB|Q3T0F2 - symbol:TRAPPC2 "Trafficking protein pa... 398 4.9e-37 1
UNIPROTKB|E2QV03 - symbol:TRAPPC2 "Trafficking protein pa... 398 4.9e-37 1
UNIPROTKB|F1SRI0 - symbol:TRAPPC2 "Trafficking protein pa... 398 4.9e-37 1
ZFIN|ZDB-GENE-060929-1266 - symbol:trappc2 "trafficking p... 398 4.9e-37 1
RGD|1306925 - symbol:Trappc2 "trafficking protein particl... 396 8.0e-37 1
RGD|6499350 - symbol:LOC100910318 "trafficking protein pa... 395 1.0e-36 1
FB|FBgn0263604 - symbol:l(3)72Dh "lethal (3) 72Dh" specie... 391 2.7e-36 1
UNIPROTKB|G5EA75 - symbol:TRAPPC2 "Trafficking protein pa... 385 1.2e-35 1
UNIPROTKB|G1K394 - symbol:TRAPPC2 "Trafficking protein pa... 382 2.4e-35 1
UNIPROTKB|Q5ZKP4 - symbol:TRAPPC2 "Trafficking protein pa... 381 3.1e-35 1
DICTYBASE|DDB_G0282887 - symbol:trappc2 "trafficking prot... 342 4.2e-31 1
TAIR|locus:2198983 - symbol:AT1G80500 "AT1G80500" species... 317 1.9e-28 1
WB|WBGene00021046 - symbol:sedl-1 species:6239 "Caenorhab... 316 2.4e-28 1
UNIPROTKB|O02173 - symbol:sedl-1 "Probable trafficking pr... 316 2.4e-28 1
UNIPROTKB|F5H785 - symbol:TRAPPC2 "Trafficking protein pa... 301 9.4e-27 1
POMBASE|SPBC11G11.04 - symbol:trs20 "TRAPP complex subuni... 294 5.2e-26 1
CGD|CAL0004070 - symbol:orf19.3314 species:5476 "Candida ... 264 7.8e-23 1
UNIPROTKB|Q5A920 - symbol:TRS20 "Putative uncharacterized... 264 7.8e-23 1
SGD|S000000458 - symbol:TRS20 "Subunit of the transport p... 183 1.4e-22 2
ASPGD|ASPL0000007051 - symbol:AN11500 species:162425 "Eme... 155 1.2e-21 2
UNIPROTKB|E5RFG0 - symbol:TRAPPC2 "Trafficking protein pa... 192 3.3e-15 1
DICTYBASE|DDB_G0292690 - symbol:trappc2l "trafficking pro... 163 3.9e-12 1
UNIPROTKB|E1BYR2 - symbol:TRAPPC2L "Uncharacterized prote... 144 4.1e-10 1
UNIPROTKB|A6H7F7 - symbol:TRAPPC2L "Trafficking protein p... 138 1.8e-09 1
RGD|1304906 - symbol:Trappc2l "trafficking protein partic... 138 1.8e-09 1
UNIPROTKB|E2RB28 - symbol:TRAPPC2L "Uncharacterized prote... 135 3.6e-09 1
MGI|MGI:1916295 - symbol:Trappc2l "trafficking protein pa... 133 5.9e-09 1
UNIPROTKB|Q9UL33 - symbol:TRAPPC2L "Trafficking protein p... 131 9.7e-09 1
UNIPROTKB|F1MIB4 - symbol:TRAPPC2L "Trafficking protein p... 129 1.6e-08 1
UNIPROTKB|H3BP13 - symbol:TRAPPC2L "Trafficking protein p... 126 6.9e-08 1
WB|WBGene00044604 - symbol:T10F2.5 species:6239 "Caenorha... 120 1.4e-07 1
UNIPROTKB|F1S6M0 - symbol:TRAPPC2L "Uncharacterized prote... 119 1.8e-07 1
FB|FBgn0033605 - symbol:CG9067 species:7227 "Drosophila m... 116 3.8e-07 1
DICTYBASE|DDB_G0280827 - symbol:trappc4 "trafficking prot... 112 1.0e-06 1
UNIPROTKB|H3BUK6 - symbol:TRAPPC2L "Trafficking protein p... 109 2.1e-06 1
FB|FBgn0260861 - symbol:Trs23 species:7227 "Drosophila me... 109 4.4e-06 1
TAIR|locus:2051457 - symbol:AT2G20930 "AT2G20930" species... 105 5.5e-06 1
ZFIN|ZDB-GENE-040426-1734 - symbol:trappc4 "trafficking p... 106 9.7e-06 1
UNIPROTKB|Q2TBL9 - symbol:TRAPPC4 "Trafficking protein pa... 103 2.1e-05 1
UNIPROTKB|E2RSA9 - symbol:TRAPPC4 "Uncharacterized protei... 103 2.1e-05 1
UNIPROTKB|F2Z5G7 - symbol:TRAPPC4 "Uncharacterized protei... 103 2.1e-05 1
MGI|MGI:1926211 - symbol:Trappc4 "trafficking protein par... 103 2.1e-05 1
RGD|1302991 - symbol:Trappc4 "trafficking protein particl... 103 2.1e-05 1
UNIPROTKB|F1NU38 - symbol:TRAPPC4 "Uncharacterized protei... 102 2.4e-05 1
UNIPROTKB|F1NXY8 - symbol:TRAPPC4 "Uncharacterized protei... 102 2.7e-05 1
UNIPROTKB|B4DME1 - symbol:TRAPPC4 "Trafficking protein pa... 100 4.9e-05 1
UNIPROTKB|E9PQE8 - symbol:TRAPPC4 "Trafficking protein pa... 100 6.7e-05 1
UNIPROTKB|E9PKS9 - symbol:TRAPPC4 "Trafficking protein pa... 92 0.00013 1
UNIPROTKB|Q9Y296 - symbol:TRAPPC4 "Trafficking protein pa... 100 0.00014 1
WB|WBGene00018088 - symbol:F36D4.2 species:6239 "Caenorha... 98 0.00050 1
UNIPROTKB|Q20100 - symbol:F36D4.2 "Protein F36D4.2" speci... 98 0.00050 1
>UNIPROTKB|P0DI81 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0044325 "ion channel binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 GO:GO:0006355
GO:GO:0006351 GO:GO:0001501 GO:GO:0006888 SUPFAM:SSF64356
EMBL:AC003037 EMBL:AF157065 EMBL:AF157062 EMBL:AF157063
EMBL:AF157064 EMBL:AK310542 EMBL:DA542477 EMBL:DB101396
EMBL:BC016915 EMBL:BC052618 IPI:IPI00005119 IPI:IPI00940542
IPI:IPI01025157 RefSeq:NP_001011658.1 RefSeq:NP_001122307.2
RefSeq:NP_055378.1 UniGene:Hs.592238 UniGene:Hs.622292
ProteinModelPortal:P0DI81 SMR:P0DI81 IntAct:P0DI81 PRIDE:P0DI81
DNASU:6399 Ensembl:ENST00000358231 Ensembl:ENST00000359680
Ensembl:ENST00000380579 Ensembl:ENST00000419678
Ensembl:ENST00000458511 GeneID:6399 KEGG:hsa:6399 UCSC:uc010nem.2
UCSC:uc022btf.1 CTD:6399 GeneCards:GC0XM013640 HGNC:HGNC:23068
HPA:CAB004665 MIM:300202 MIM:313400 neXtProt:NX_P0DI81 OMA:VGHNDNP
ChiTaRS:TRAPPC2 GenomeRNAi:6399 NextBio:24860 ArrayExpress:P0DI81
Bgee:P0DI81 CleanEx:HS_TRAPPC2 Genevestigator:O14582
GermOnline:ENSG00000196459 PANTHER:PTHR12403 Uniprot:P0DI81
Length = 140
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 71/138 (51%), Positives = 107/138 (77%)
Query: 1 MANRYYFVMVGREDNPLYQRGF--SCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMY 58
M+ +YFV+VG DNP+++ F + K + +++++ +FIAHA+LDL+DE +W +++MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 59 LKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTP 118
LKT+DKFN+ VSAFVT ++F+M+HD + E+GIK FFT VY+L+IK+S+NPFY+ N+P
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSP 120
Query: 119 INSTYFDSKVNFLGRKFL 136
I S+ FD KV FLG+K L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>UNIPROTKB|P0DI82 [details] [associations]
symbol:TRAPPC2P1 "Trafficking protein particle complex
subunit 2 protein TRAPPC2P1" species:9606 "Homo sapiens"
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005634 GO:GO:0005794 GO:GO:0048471
GO:GO:0006351 GO:GO:0006888 SUPFAM:SSF64356 IPI:IPI00005119
RefSeq:NP_001011658.1 RefSeq:NP_055378.1 UniGene:Hs.592238
UniGene:Hs.622292 DNASU:6399 GeneID:6399 KEGG:hsa:6399 CTD:6399
HPA:CAB004665 GenomeRNAi:6399 NextBio:24860 CleanEx:HS_TRAPPC2
PANTHER:PTHR12403 EMBL:AF291676 EMBL:AF058918 EMBL:AC003002
EMBL:BC008889 EMBL:BC032809 UniGene:Hs.446620
ProteinModelPortal:P0DI82 SMR:P0DI82 STRING:O14582 PRIDE:P0DI82
Ensembl:ENST00000543226 GeneCards:GC19P057874 HGNC:HGNC:10710
neXtProt:NX_P0DI82 ArrayExpress:P0DI82 Bgee:P0DI82 Uniprot:P0DI82
Length = 140
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 71/138 (51%), Positives = 107/138 (77%)
Query: 1 MANRYYFVMVGREDNPLYQRGF--SCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMY 58
M+ +YFV+VG DNP+++ F + K + +++++ +FIAHA+LDL+DE +W +++MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 59 LKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTP 118
LKT+DKFN+ VSAFVT ++F+M+HD + E+GIK FFT VY+L+IK+S+NPFY+ N+P
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSP 120
Query: 119 INSTYFDSKVNFLGRKFL 136
I S+ FD KV FLG+K L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>UNIPROTKB|Q3T0F2 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9913 "Bos taurus" [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 OMA:VGHNDNP PANTHER:PTHR12403
EMBL:BC102418 IPI:IPI00696352 RefSeq:NP_001029968.1
UniGene:Bt.13900 ProteinModelPortal:Q3T0F2 SMR:Q3T0F2 STRING:Q3T0F2
PRIDE:Q3T0F2 Ensembl:ENSBTAT00000014509 GeneID:616748
KEGG:bta:616748 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 HOVERGEN:HBG006717 InParanoid:Q3T0F2
OrthoDB:EOG49GKHT NextBio:20900300 Uniprot:Q3T0F2
Length = 140
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 70/138 (50%), Positives = 107/138 (77%)
Query: 1 MANRYYFVMVGREDNPLYQRGF--SCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMY 58
M+ +YFV+VG DNP+++ F + K + +++++ +FIAHA+LDL+DE +W +++MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 59 LKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTP 118
LKT+DKFN+ VSAFVT ++F+M+HD + E+GIK FFT VY+L+IK+++NPFY+ N+P
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120
Query: 119 INSTYFDSKVNFLGRKFL 136
I S+ FD KV FLG+K L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>UNIPROTKB|E2QV03 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9615 "Canis lupus familiaris" [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 PANTHER:PTHR12403 Uniprot:E2QV03
Length = 140
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 70/138 (50%), Positives = 107/138 (77%)
Query: 1 MANRYYFVMVGREDNPLYQRGF--SCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMY 58
M+ +YFV+VG DNP+++ F + K + +++++ +FIAHA+LDL+DE +W +++MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 59 LKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTP 118
LKT+DKFN+ VSAFVT ++F+M+HD + E+GIK FFT VY+L+IK+++NPFY+ N+P
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120
Query: 119 INSTYFDSKVNFLGRKFL 136
I S+ FD KV FLG+K L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>UNIPROTKB|F1SRI0 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9823 "Sus scrofa" [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 PANTHER:PTHR12403
GeneTree:ENSGT00510000047168 EMBL:AY610478 EMBL:AK344004
EMBL:CU633939 RefSeq:NP_001231738.1 UniGene:Ssc.8205
ProteinModelPortal:F1SRI0 SMR:F1SRI0 PRIDE:F1SRI0
Ensembl:ENSSSCT00000033348 Ensembl:ENSSSCT00000034259
GeneID:100513447 KEGG:ssc:100513447 Uniprot:F1SRI0
Length = 140
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 70/138 (50%), Positives = 107/138 (77%)
Query: 1 MANRYYFVMVGREDNPLYQRGF--SCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMY 58
M+ +YFV+VG DNP+++ F + K + +++++ +FIAHA+LDL+DE +W +++MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 59 LKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTP 118
LKT+DKFN+ VSAFVT ++F+M+HD + E+GIK FFT VY+L+IK+++NPFY+ N+P
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120
Query: 119 INSTYFDSKVNFLGRKFL 136
I S+ FD KV FLG+K L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>ZFIN|ZDB-GENE-060929-1266 [details] [associations]
symbol:trappc2 "trafficking protein particle
complex 2" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 ZFIN:ZDB-GENE-060929-1266
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 PANTHER:PTHR12403 eggNOG:COG5603
GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
HOVERGEN:HBG006717 OrthoDB:EOG49GKHT EMBL:BC124169 IPI:IPI00806101
RefSeq:NP_001070243.1 UniGene:Dr.16486 ProteinModelPortal:Q08CN0
SMR:Q08CN0 STRING:Q08CN0 Ensembl:ENSDART00000099693 GeneID:767808
KEGG:dre:767808 InParanoid:Q08CN0 NextBio:20918186
ArrayExpress:Q08CN0 Bgee:Q08CN0 Uniprot:Q08CN0
Length = 140
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 69/138 (50%), Positives = 105/138 (76%)
Query: 1 MANRYYFVMVGREDNPLYQRGF--SCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMY 58
M+ +YFVMVG DNP+++ F K + +++++ +FIAHA+LDL+DE +W +++MY
Sbjct: 1 MSGSFYFVMVGHHDNPVFELEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 59 LKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTP 118
LKT+DKFN+ VSAFVT ++F+M+HD + E+GIK FF VY+L++K+++NPFY++N P
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFNDVYDLYVKFAMNPFYEVNAP 120
Query: 119 INSTYFDSKVNFLGRKFL 136
I ST F+ KV FLG+K L
Sbjct: 121 IRSTAFERKVQFLGKKHL 138
>RGD|1306925 [details] [associations]
symbol:Trappc2 "trafficking protein particle complex 2"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0030008 "TRAPP
complex" evidence=ISO] [GO:0044325 "ion channel binding"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
RGD:1306925 GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 CTD:6399
PANTHER:PTHR12403 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 HOVERGEN:HBG006717 OrthoDB:EOG49GKHT
EMBL:CH474014 EMBL:BC091429 IPI:IPI00212787 RefSeq:NP_001020136.1
UniGene:Rn.8274 SMR:Q5BJL8 STRING:Q5BJL8 Ensembl:ENSRNOT00000068113
GeneID:501550 KEGG:rno:501550 UCSC:RGD:1306925 InParanoid:Q5BJL8
NextBio:709167 Genevestigator:Q5BJL8 Uniprot:Q5BJL8
Length = 140
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 70/138 (50%), Positives = 106/138 (76%)
Query: 1 MANRYYFVMVGREDNPLYQRGF--SCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMY 58
M+ +YFV+VG DNP+++ F K + +++++ +FIAHA+LDL+DE +W +++MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 59 LKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTP 118
LKT+DKFN+ VSAFVT ++F+M+HD + E+GIK FFT VY+L+IK+++NPFY+ N+P
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120
Query: 119 INSTYFDSKVNFLGRKFL 136
I S+ FD KV FLG+K L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>RGD|6499350 [details] [associations]
symbol:LOC100910318 "trafficking protein particle complex
subunit 2-like" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 GO:GO:0006351
GO:GO:0006888 SUPFAM:SSF64356 EMBL:CH473948 OMA:VGHNDNP
PANTHER:PTHR12403 GeneTree:ENSGT00510000047168 OrthoDB:EOG49GKHT
EMBL:AC105470 IPI:IPI00817107 RefSeq:NP_001258040.1
RefSeq:NP_001258041.1 Ensembl:ENSRNOT00000006006 GeneID:100910318
KEGG:rno:100910318 Uniprot:D3ZVF4
Length = 140
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 70/138 (50%), Positives = 106/138 (76%)
Query: 1 MANRYYFVMVGREDNPLYQRGF--SCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMY 58
M+ +YFV+VG DNP+++ F + K + +E+++ +FIAHA+LDL+DE +W +++MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKTESKDEHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 59 LKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTP 118
LKT+DKFN+ VSAFVT ++ +M+HD + E+GIK FFT VY+L+IK+++NPFY+ N+P
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRLIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120
Query: 119 INSTYFDSKVNFLGRKFL 136
I ST F+ KV FLG+K L
Sbjct: 121 IRSTAFERKVQFLGKKHL 138
>FB|FBgn0263604 [details] [associations]
symbol:l(3)72Dh "lethal (3) 72Dh" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IGI] [GO:0033227 "dsRNA transport"
evidence=IMP] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 EMBL:AE014296
GO:GO:0006888 GO:GO:0033227 SUPFAM:SSF64356 GO:GO:0007224
OMA:VGHNDNP PANTHER:PTHR12403 eggNOG:COG5603
GeneTree:ENSGT00510000047168 HSSP:Q9CQP2 EMBL:AY071561
RefSeq:NP_648841.1 UniGene:Dm.18901 ProteinModelPortal:Q9VUZ1
IntAct:Q9VUZ1 MINT:MINT-822446 STRING:Q9VUZ1 PaxDb:Q9VUZ1
EnsemblMetazoa:FBtr0075491 GeneID:39769 KEGG:dme:Dmel_CG5161
UCSC:CG5161-RA FlyBase:FBgn0036573 InParanoid:Q9VUZ1
OrthoDB:EOG43BK56 PhylomeDB:Q9VUZ1 GenomeRNAi:39769 NextBio:815287
Bgee:Q9VUZ1 Uniprot:Q9VUZ1
Length = 139
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 69/134 (51%), Positives = 100/134 (74%)
Query: 5 YYFVMVGREDNPLYQRGFSC--KEANDNENKYYYEFIAHASLDLLDEQVWQTDHMYLKTI 62
YYFV+VG+ DNP+Y++ FS KE ++++ +FIAHA+LDL+DE W+T +M LK+I
Sbjct: 4 YYFVIVGQNDNPIYEKEFSTVNKELRKEDHRHLTQFIAHAALDLVDEHKWKTANMQLKSI 63
Query: 63 DKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTPINST 122
D+FN VSAF+T + ++F++VHD+KN+EGIK FF +Y+ +IK S+N FY+INTPI S
Sbjct: 64 DRFNQWFVSAFITASQIRFIIVHDNKNDEGIKNFFNEMYDTYIKNSMNAFYRINTPIKSP 123
Query: 123 YFDSKVNFLGRKFL 136
F+ K GRK+L
Sbjct: 124 MFEKKSEIFGRKYL 137
>UNIPROTKB|G5EA75 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9823 "Sus scrofa" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006722 InterPro:IPR011012
Pfam:PF04628 GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356
OMA:VGHNDNP PANTHER:PTHR12403 GeneTree:ENSGT00510000047168
EMBL:CU633939 Ensembl:ENSSSCT00000013263 Uniprot:G5EA75
Length = 144
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 70/142 (49%), Positives = 107/142 (75%)
Query: 1 MANRYYFVMVGREDNPLYQRGF--SCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMY 58
M+ +YFV+VG DNP+++ F + K + +++++ +FIAHA+LDL+DE +W +++MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 59 LKTIDKFNDMMVSAFVTPTGV----KFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYK 114
LKT+DKFN+ VSAFVT + +F+M+HD + E+GIK FFT VY+L+IK+++NPFY+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHILIYMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYE 120
Query: 115 INTPINSTYFDSKVNFLGRKFL 136
N+PI S+ FD KV FLG+K L
Sbjct: 121 PNSPIRSSAFDRKVQFLGKKHL 142
>UNIPROTKB|G1K394 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC003037
HGNC:HGNC:23068 ChiTaRS:TRAPPC2 PANTHER:PTHR12403
ProteinModelPortal:G1K394 SMR:G1K394 PRIDE:G1K394
Ensembl:ENST00000453655 ArrayExpress:G1K394 Bgee:G1K394
Uniprot:G1K394
Length = 147
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 71/145 (48%), Positives = 107/145 (73%)
Query: 1 MANRYYFVMVGREDNPLYQRGF--SCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMY 58
M+ +YFV+VG DNP+++ F + K + +++++ +FIAHA+LDL+DE +W +++MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 59 LKTIDKFNDMMVSAFVTPTGV-------KFLMVHDSKNEEGIKKFFTSVYELFIKYSLNP 111
LKT+DKFN+ VSAFVT + +F+M+HD + E+GIK FFT VY+L+IK+S+NP
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHILTFLVKMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNP 120
Query: 112 FYKINTPINSTYFDSKVNFLGRKFL 136
FY+ N+PI S+ FD KV FLG+K L
Sbjct: 121 FYEPNSPIRSSAFDRKVQFLGKKHL 145
>UNIPROTKB|Q5ZKP4 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9031 "Gallus gallus" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 OMA:VGHNDNP PANTHER:PTHR12403
eggNOG:COG5603 GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
HOVERGEN:HBG006717 OrthoDB:EOG49GKHT EMBL:AJ720040
EMBL:AADN02011353 IPI:IPI00570779 RefSeq:NP_001006263.1
UniGene:Gga.7014 STRING:Q5ZKP4 Ensembl:ENSGALT00000026761
GeneID:418634 KEGG:gga:418634 InParanoid:Q5ZKP4 NextBio:20821790
Uniprot:Q5ZKP4
Length = 140
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 66/138 (47%), Positives = 104/138 (75%)
Query: 1 MANRYYFVMVGREDNPLYQRGF--SCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMY 58
M+ +YFV+VG DNP+++ F K + +++++ +FIAHA+LDL+DE +W +++MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 59 LKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTP 118
LKT+DKFN+ VSAF ++F+M+HD + E+GIK FF VY+L+IK+++NPFY++N+P
Sbjct: 61 LKTVDKFNEWFVSAFAFVLHMRFIMLHDVRQEDGIKNFFNDVYDLYIKFAMNPFYELNSP 120
Query: 119 INSTYFDSKVNFLGRKFL 136
I S+ F+ KV FLG+K L
Sbjct: 121 IRSSAFERKVQFLGKKHL 138
>DICTYBASE|DDB_G0282887 [details] [associations]
symbol:trappc2 "trafficking protein particle complex
subunit 2" species:44689 "Dictyostelium discoideum" [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 dictyBase:DDB_G0282887
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 HSSP:Q9CQP2 RefSeq:XP_639381.1
ProteinModelPortal:Q54RV6 STRING:Q54RV6 EnsemblProtists:DDB0266387
GeneID:8623820 KEGG:ddi:DDB_G0282887 Uniprot:Q54RV6
Length = 133
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 60/131 (45%), Positives = 93/131 (70%)
Query: 5 YYFVMVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMYLKTIDK 64
+ F+++G+ DNPLY+ F + Y ++IAH SLD+++E VW++++MYLK IDK
Sbjct: 4 FTFLIIGKNDNPLYEIEFPITV--QKKETYVLQYIAHGSLDIVEEHVWKSNNMYLKIIDK 61
Query: 65 FNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTPINSTYF 124
FN + +S+FVT +KFL++H+ K+E+ IK FF V++L++K LNPFY+ N PI ST F
Sbjct: 62 FNKVQISSFVTAGHIKFLLLHEKKDEDAIKNFFVEVHDLYLKILLNPFYEYNKPITSTAF 121
Query: 125 DSKVNFLGRKF 135
D+KV +G K+
Sbjct: 122 DAKVRKIGTKY 132
>TAIR|locus:2198983 [details] [associations]
symbol:AT1G80500 "AT1G80500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 EMBL:CP002684 GO:GO:0005622
GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP PANTHER:PTHR12403
IPI:IPI00548390 RefSeq:NP_178165.2 UniGene:At.43306
ProteinModelPortal:F4HTY0 SMR:F4HTY0 PRIDE:F4HTY0
EnsemblPlants:AT1G80500.1 GeneID:844389 KEGG:ath:AT1G80500
Uniprot:F4HTY0
Length = 135
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 59/136 (43%), Positives = 90/136 (66%)
Query: 1 MANRYYFVMVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMYLK 60
MAN F++VGR D P+Y+ A + ++FI HA+LD++ + W T M+LK
Sbjct: 1 MANTACFIIVGRNDIPIYEAEVG-SAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLK 59
Query: 61 TIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTPIN 120
++D+FND++VS +VT + +++HDS+NE+GIK FF V+EL+IK LNP Y + I
Sbjct: 60 SVDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRIT 119
Query: 121 STYFDSKVNFLGRKFL 136
S++FD+KV L RK+L
Sbjct: 120 SSHFDTKVRALARKYL 135
>WB|WBGene00021046 [details] [associations]
symbol:sedl-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] InterPro:IPR006722 InterPro:IPR011012
Pfam:PF04628 GO:GO:0005783 GO:GO:0005794 GO:GO:0048471
GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP PANTHER:PTHR12403
eggNOG:COG5603 GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
EMBL:FO080991 PIR:T29507 RefSeq:NP_508272.1 HSSP:Q9CQP2
ProteinModelPortal:O02173 SMR:O02173 IntAct:O02173 STRING:O02173
PaxDb:O02173 EnsemblMetazoa:W05H7.3 GeneID:180478
KEGG:cel:CELE_W05H7.3 UCSC:W05H7.3 CTD:180478 WormBase:W05H7.3
InParanoid:O02173 NextBio:909558 Uniprot:O02173
Length = 141
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 58/141 (41%), Positives = 92/141 (65%)
Query: 1 MANR-YYFVMVGREDNPLYQRGFSCKEANDNEN---KYYYEFIAHASLDLLDEQVWQTDH 56
MA + +YF ++G D P+++ F E E+ ++ +I HA+LD++DE T
Sbjct: 1 MATKEFYFAIIGHCDQPIFEMDFPVGEKKTKESEGTRHLNHYIGHAALDIVDEHALTTSQ 60
Query: 57 MYLKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKIN 116
MYLK +DKFN+ VSAFVT + ++F+M+H + +EGIK+FF +YE +IK+++NPFY+I+
Sbjct: 61 MYLKMVDKFNEWYVSAFVTASRIRFIMLHTHRADEGIKQFFQEMYETYIKHAMNPFYEID 120
Query: 117 TPINSTYFDSKVNFLGRKFLT 137
I S F+ K GRK+L+
Sbjct: 121 DVIESPAFEQKATLYGRKYLS 141
>UNIPROTKB|O02173 [details] [associations]
symbol:sedl-1 "Probable trafficking protein particle
complex subunit 2" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005794
GO:GO:0048471 GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 EMBL:FO080991 PIR:T29507 RefSeq:NP_508272.1
HSSP:Q9CQP2 ProteinModelPortal:O02173 SMR:O02173 IntAct:O02173
STRING:O02173 PaxDb:O02173 EnsemblMetazoa:W05H7.3 GeneID:180478
KEGG:cel:CELE_W05H7.3 UCSC:W05H7.3 CTD:180478 WormBase:W05H7.3
InParanoid:O02173 NextBio:909558 Uniprot:O02173
Length = 141
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 58/141 (41%), Positives = 92/141 (65%)
Query: 1 MANR-YYFVMVGREDNPLYQRGFSCKEANDNEN---KYYYEFIAHASLDLLDEQVWQTDH 56
MA + +YF ++G D P+++ F E E+ ++ +I HA+LD++DE T
Sbjct: 1 MATKEFYFAIIGHCDQPIFEMDFPVGEKKTKESEGTRHLNHYIGHAALDIVDEHALTTSQ 60
Query: 57 MYLKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKIN 116
MYLK +DKFN+ VSAFVT + ++F+M+H + +EGIK+FF +YE +IK+++NPFY+I+
Sbjct: 61 MYLKMVDKFNEWYVSAFVTASRIRFIMLHTHRADEGIKQFFQEMYETYIKHAMNPFYEID 120
Query: 117 TPINSTYFDSKVNFLGRKFLT 137
I S F+ K GRK+L+
Sbjct: 121 DVIESPAFEQKATLYGRKYLS 141
>UNIPROTKB|F5H785 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC003037
HGNC:HGNC:23068 ChiTaRS:TRAPPC2 PANTHER:PTHR12403 IPI:IPI00979652
ProteinModelPortal:F5H785 SMR:F5H785 Ensembl:ENST00000519885
ArrayExpress:F5H785 Bgee:F5H785 Uniprot:F5H785
Length = 113
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 53/108 (49%), Positives = 83/108 (76%)
Query: 1 MANRYYFVMVGREDNPLYQRGF--SCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMY 58
M+ +YFV+VG DNP+++ F + K + +++++ +FIAHA+LDL+DE +W +++MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 59 LKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIK 106
LKT+DKFN+ VSAFVT ++F+M+HD + E+GIK FFT VY+L+IK
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIK 108
>POMBASE|SPBC11G11.04 [details] [associations]
symbol:trs20 "TRAPP complex subunit Trs20 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005801 "cis-Golgi network" evidence=IC] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0030008 "TRAPP complex" evidence=ISO] [GO:0032313
"regulation of Rab GTPase activity" evidence=IC] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
PomBase:SPBC11G11.04 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006888
GO:GO:0032313 SUPFAM:SSF64356 GO:GO:0030008 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 HOGENOM:HOG000214139 HSSP:Q9CQP2
PIR:T39331 RefSeq:NP_595722.1 ProteinModelPortal:Q9USZ5
STRING:Q9USZ5 EnsemblFungi:SPBC11G11.04.1 GeneID:2539833
KEGG:spo:SPBC11G11.04 OrthoDB:EOG479JHG NextBio:20800981
Uniprot:Q9USZ5
Length = 136
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 52/133 (39%), Positives = 90/133 (67%)
Query: 6 YFVMVGREDNPLYQRGFS-CKEANDNE-NKYYYEFIAHASLDLLDEQVWQTDHMYLKTID 63
Y ++G +DNP+Y+ E D N + +FI H+SLD++D+ W ++ Y+KTID
Sbjct: 4 YAAIIGTKDNPVYELEMGPINEKLDRSLNSHLNQFIVHSSLDIVDQLQWTSNAFYMKTID 63
Query: 64 KFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTPINSTY 123
+F++M +SA+VTP+ ++F+++H +++ + IK FF ++EL+IK ++PFY+ N PI S
Sbjct: 64 QFHEMYISAYVTPSNMRFMLLHQNQSADNIKLFFQELHELYIKTLMSPFYQPNQPIRSQA 123
Query: 124 FDSKVNFLGRKFL 136
FD KV + R++L
Sbjct: 124 FDLKVRSIARRYL 136
>CGD|CAL0004070 [details] [associations]
symbol:orf19.3314 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030008
"TRAPP complex" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 CGD:CAL0004070 GO:GO:0005622
GO:GO:0006888 EMBL:AACQ01000045 EMBL:AACQ01000042 SUPFAM:SSF64356
PANTHER:PTHR12403 eggNOG:COG5603 HOGENOM:HOG000214139
RefSeq:XP_718137.1 RefSeq:XP_718406.1 ProteinModelPortal:Q5A920
STRING:Q5A920 GeneID:3639907 GeneID:3640214 KEGG:cal:CaO19.10824
KEGG:cal:CaO19.3314 Uniprot:Q5A920
Length = 150
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 61/150 (40%), Positives = 91/150 (60%)
Query: 1 MANRYYFVMVGREDNPLYQRGFSC-KEAN----DN---------ENKYYYEFIAHASLDL 46
M++ YYF ++G +DNPLY+ FS K AN DN K FIA++SLDL
Sbjct: 1 MSSSYYFSIIGTKDNPLYELEFSSFKSANISTTDNVPGKSQFPQSTKELLPFIANSSLDL 60
Query: 47 LDEQVWQTDHMYLKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIK 106
+D+Q + T+ + L ID+F + ++A+V + VKF++ ++SK E IK+FF V EL+ K
Sbjct: 61 IDDQAFTTNVLNLGKIDQFYGLSINAYVLQSQVKFILCYNSKEESTIKQFFQEVNELYTK 120
Query: 107 YSLNPFYKINTPINSTYFDSKVNFLGRKFL 136
+NPFY ++ I S FD K+ L RK+L
Sbjct: 121 CLMNPFYNVDDAIVSPDFDLKIKQLARKYL 150
>UNIPROTKB|Q5A920 [details] [associations]
symbol:TRS20 "Putative uncharacterized protein TRS20"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 CGD:CAL0004070 GO:GO:0005622
GO:GO:0006888 EMBL:AACQ01000045 EMBL:AACQ01000042 SUPFAM:SSF64356
PANTHER:PTHR12403 eggNOG:COG5603 HOGENOM:HOG000214139
RefSeq:XP_718137.1 RefSeq:XP_718406.1 ProteinModelPortal:Q5A920
STRING:Q5A920 GeneID:3639907 GeneID:3640214 KEGG:cal:CaO19.10824
KEGG:cal:CaO19.3314 Uniprot:Q5A920
Length = 150
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 61/150 (40%), Positives = 91/150 (60%)
Query: 1 MANRYYFVMVGREDNPLYQRGFSC-KEAN----DN---------ENKYYYEFIAHASLDL 46
M++ YYF ++G +DNPLY+ FS K AN DN K FIA++SLDL
Sbjct: 1 MSSSYYFSIIGTKDNPLYELEFSSFKSANISTTDNVPGKSQFPQSTKELLPFIANSSLDL 60
Query: 47 LDEQVWQTDHMYLKTIDKFNDMMVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIK 106
+D+Q + T+ + L ID+F + ++A+V + VKF++ ++SK E IK+FF V EL+ K
Sbjct: 61 IDDQAFTTNVLNLGKIDQFYGLSINAYVLQSQVKFILCYNSKEESTIKQFFQEVNELYTK 120
Query: 107 YSLNPFYKINTPINSTYFDSKVNFLGRKFL 136
+NPFY ++ I S FD K+ L RK+L
Sbjct: 121 CLMNPFYNVDDAIVSPDFDLKIKQLARKYL 150
>SGD|S000000458 [details] [associations]
symbol:TRS20 "Subunit of the transport protein particle
(TRAPP) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0000407
"pre-autophagosomal structure" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA;IGI;IMP] [GO:0030008
"TRAPP complex" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016192 "vesicle-mediated transport" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 SGD:S000000458
GO:GO:0005783 GO:GO:0006914 EMBL:BK006936 GO:GO:0006888 EMBL:X70529
SUPFAM:SSF64356 GO:GO:0000407 GO:GO:0030008 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 OrthoDB:EOG479JHG EMBL:Z36123 PIR:S32957
RefSeq:NP_009813.1 ProteinModelPortal:P38334 SMR:P38334
DIP:DIP-1711N IntAct:P38334 MINT:MINT-407365 STRING:P38334
PaxDb:P38334 EnsemblFungi:YBR254C GeneID:852556 KEGG:sce:YBR254C
CYGD:YBR254c NextBio:971655 Genevestigator:P38334
GermOnline:YBR254C Uniprot:P38334
Length = 175
Score = 183 (69.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 38/99 (38%), Positives = 61/99 (61%)
Query: 46 LLDEQVWQTDHMYLKTIDKFNDMMVSAFVTPTGVKFLMVH-DSKN------EEGIKKFFT 98
L V TD+ YL +D F + ++A+++ +G+KF+M+H +S N + ++ F+
Sbjct: 76 LRSRAVNNTDNCYLGKVDHFYGLAITAYISYSGMKFVMIHGNSANSSVVIDDNNMRSFYQ 135
Query: 99 SVYELFIKYSLNPFYKINTPINSTYFDSKVNFLGRKFLT 137
V+EL++K +NPFYKI PI S FDS+V L RK L+
Sbjct: 136 EVHELYVKTLMNPFYKITDPIRSPAFDSRVRTLARKHLS 174
Score = 93 (37.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 6 YFVMVGREDNPLYQRGFSCKEANDN---ENKYYYEFIAHASLDLLDEQVWQ 53
YF ++G++DNP+Y+ F+ E + K FI HASLD++++ WQ
Sbjct: 4 YFAIIGKKDNPVYEIEFTNAENPQGFPQDLKELNPFILHASLDIVEDLQWQ 54
>ASPGD|ASPL0000007051 [details] [associations]
symbol:AN11500 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030008 "TRAPP complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 EMBL:BN001301
GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403
HOGENOM:HOG000214139 EnsemblFungi:CADANIAT00006889 OMA:MYLKHID
Uniprot:C8V2D4
Length = 207
Score = 155 (59.6 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 36/94 (38%), Positives = 52/94 (55%)
Query: 5 YYFVMVGREDNPLYQRGF-SCKEANDN----------ENKYYYEFIAHASLDLLDEQVWQ 53
YYF ++ D PL+ F + K D +N Y +FI H+SLD+L+E W
Sbjct: 3 YYFTILSPTDVPLFNIAFGTSKSGGDGIARFRFPDAAQNTYMTQFIIHSSLDMLEEAQWM 62
Query: 54 TDHMYLKTIDKFN--DMMVSAFVTPTGVKFLMVH 85
+MYLK ID + VSAF+TP+G +FL++H
Sbjct: 63 GGNMYLKHIDTYPPASAYVSAFLTPSGTRFLLLH 96
Score = 112 (44.5 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 88 KNEEGIKKFFTSVYELFIKYSLNPFYKINTPINSTYFDSKVNFLGRKFL 136
+ EE +++F T VYE ++K ++PFY+ I S F SKV+ GRK+L
Sbjct: 159 QTEEAVRQFMTEVYEAYVKTVMSPFYRRGMEIRSPVFRSKVSAAGRKWL 207
>UNIPROTKB|E5RFG0 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC003037
HGNC:HGNC:23068 ChiTaRS:TRAPPC2 PANTHER:PTHR12403 IPI:IPI00641353
ProteinModelPortal:E5RFG0 SMR:E5RFG0 Ensembl:ENST00000518847
ArrayExpress:E5RFG0 Bgee:E5RFG0 Uniprot:E5RFG0
Length = 74
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 34/74 (45%), Positives = 56/74 (75%)
Query: 1 MANRYYFVMVGREDNPLYQRGF--SCKEANDNENKYYYEFIAHASLDLLDEQVWQTDHMY 58
M+ +YFV+VG DNP+++ F + K + +++++ +FIAHA+LDL+DE +W +++MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 59 LKTIDKFNDMMVSA 72
LKT+DKFN+ VSA
Sbjct: 61 LKTVDKFNEWFVSA 74
>DICTYBASE|DDB_G0292690 [details] [associations]
symbol:trappc2l "trafficking protein particle complex
subunit 2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
dictyBase:DDB_G0292690 GenomeReviews:CM000155_GR EMBL:AAFI02000194
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403
eggNOG:NOG238004 RefSeq:XP_629573.1 ProteinModelPortal:Q54CU7
PRIDE:Q54CU7 EnsemblProtists:DDB0266384 GeneID:8628834
KEGG:ddi:DDB_G0292690 OMA:CNPFYIP ProtClustDB:CLSZ2728724
Uniprot:Q54CU7
Length = 140
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 43/131 (32%), Positives = 71/131 (54%)
Query: 9 MVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVWQT----DHMYLKTIDK 64
+VG+ +NPL+ + FS ++N+ K +Y I H SLD+++++ MYL +
Sbjct: 9 IVGKGNNPLFIQDFSSSITDENKLKLHY--IVHCSLDIIEDKPGSNKKLPSDMYLGLLYP 66
Query: 65 FNDMMVSAFVTPTGVKFLMV----HDSKNEEGIKKFFTSVYELFIKYSLNPFYKINTPIN 120
D V ++T T +KF++V D K+ + +K FF + LFI + NPFYK N+ +
Sbjct: 67 TEDYKVYGYLTNTKIKFIIVVLDTSDIKDSD-LKLFFKRLQTLFINTTSNPFYKPNSKVE 125
Query: 121 STYFDSKVNFL 131
S F +V L
Sbjct: 126 SKKFLQEVTNL 136
>UNIPROTKB|E1BYR2 [details] [associations]
symbol:TRAPPC2L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005737
GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403 CTD:51693
OMA:CNPFYIP GeneTree:ENSGT00510000047505 EMBL:AADN02054103
IPI:IPI00575042 RefSeq:XP_414207.1 Ensembl:ENSGALT00000010103
GeneID:415847 KEGG:gga:415847 NextBio:20819390 Uniprot:E1BYR2
Length = 139
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 42/132 (31%), Positives = 65/132 (49%)
Query: 9 MVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVW-----QTDH--MYLKT 61
++ +E+ PLY R +NE K++Y H SLD++DE++ D +YL
Sbjct: 7 VIAKENYPLYIRSVP----TENELKFHYT--VHTSLDVVDEKISAMGKAMVDQRELYLGL 60
Query: 62 IDKFNDMMVSAFVTPTGVKFLMVHDSKN----EEGIKKFFTSVYELFIKYSLNPFYKINT 117
+ D V +VT + VKF+MV DS N + I+ F ++ + NPFY
Sbjct: 61 LYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDIMCNPFYNPGD 120
Query: 118 PINSTYFDSKVN 129
I+S FD+ VN
Sbjct: 121 RIHSRAFDNMVN 132
>UNIPROTKB|A6H7F7 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9913 "Bos taurus" [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 PANTHER:PTHR12403 EMBL:BC146228 IPI:IPI00854544
RefSeq:NP_001092390.1 UniGene:Bt.2967 ProteinModelPortal:A6H7F7
STRING:A6H7F7 GeneID:509955 KEGG:bta:509955 CTD:51693
eggNOG:NOG238004 HOGENOM:HOG000230646 HOVERGEN:HBG056603
InParanoid:A6H7F7 OrthoDB:EOG4N8R62 NextBio:20869211 Uniprot:A6H7F7
Length = 139
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 41/131 (31%), Positives = 63/131 (48%)
Query: 9 MVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVWQ-----TDH--MYLKT 61
++ +E+ PLY R +NE K++Y + H SLD++DE++ D +YL
Sbjct: 7 VIAKENYPLYIRSIP----TENELKFHY--MVHTSLDVVDEKISAMGKALVDQRELYLGL 60
Query: 62 IDKFNDMMVSAFVTPTGVKFLMVHDSKN----EEGIKKFFTSVYELFIKYSLNPFYKINT 117
+ D V +VT + VKF+MV DS N + I+ F ++ + NPFY
Sbjct: 61 LYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGD 120
Query: 118 PINSTYFDSKV 128
I S FD V
Sbjct: 121 RIQSRAFDGMV 131
>RGD|1304906 [details] [associations]
symbol:Trappc2l "trafficking protein particle complex 2-like"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 RGD:1304906 GO:GO:0005783
GO:GO:0005794 GO:GO:0048471 GO:GO:0006888 EMBL:CH473972
SUPFAM:SSF64356 PANTHER:PTHR12403 CTD:51693 eggNOG:NOG238004
HOGENOM:HOG000230646 OrthoDB:EOG4N8R62 OMA:CNPFYIP
GeneTree:ENSGT00510000047505 EMBL:BC166907 EMBL:BC166917
EMBL:BC168734 IPI:IPI00363736 RefSeq:NP_001099663.1
UniGene:Rn.24899 ProteinModelPortal:B2RYU6 STRING:B2RYU6
Ensembl:ENSRNOT00000019740 GeneID:292074 KEGG:rno:292074
UCSC:RGD:1304906 NextBio:633712 Genevestigator:B2RYU6
Uniprot:B2RYU6
Length = 139
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 41/131 (31%), Positives = 64/131 (48%)
Query: 9 MVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVWQ-----TDH--MYLKT 61
++ +E+ PLY R +NE K++Y + H SLD++DE++ D +YL
Sbjct: 7 VIAKENYPLYIRS----TPTENELKFHY--MVHTSLDVVDEKISAMGKALVDQRELYLGL 60
Query: 62 IDKFNDMMVSAFVTPTGVKFLMVHDSKN----EEGIKKFFTSVYELFIKYSLNPFYKINT 117
+ D V +VT + VKF+MV DS N + I+ F ++ + NPFY
Sbjct: 61 LYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGD 120
Query: 118 PINSTYFDSKV 128
I S FD+ V
Sbjct: 121 RIQSRAFDTMV 131
>UNIPROTKB|E2RB28 [details] [associations]
symbol:TRAPPC2L "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005737
GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403 OMA:CNPFYIP
GeneTree:ENSGT00510000047505 EMBL:AAEX03003965
Ensembl:ENSCAFT00000037607 Uniprot:E2RB28
Length = 140
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 9 MVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVWQ-----TDH--MYLKT 61
++ +E+ PLY R +NE K++Y + H SLD++DE++ D +YL
Sbjct: 7 VIAKENYPLYIRSIP----TENELKFHY--MVHTSLDVVDEKISAMGKALVDQRELYLGL 60
Query: 62 IDKFNDMMVS-AFVTPTGVKFLMVHDSKN----EEGIKKFFTSVYELFIKYSLNPFYKIN 116
+ D + +VT + VKF+MV DS N + I+ F ++ + NPFY
Sbjct: 61 LYPTEDYKIKYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPG 120
Query: 117 TPINSTYFDSKV 128
I+S FDS V
Sbjct: 121 DRIHSRAFDSMV 132
>MGI|MGI:1916295 [details] [associations]
symbol:Trappc2l "trafficking protein particle complex
2-like" species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 MGI:MGI:1916295 GO:GO:0005783
GO:GO:0005794 GO:GO:0048471 GO:GO:0006888 SUPFAM:SSF64356
PANTHER:PTHR12403 CTD:51693 eggNOG:NOG238004 HOGENOM:HOG000230646
HOVERGEN:HBG056603 OrthoDB:EOG4N8R62 OMA:CNPFYIP EMBL:AB030200
EMBL:AK007526 EMBL:BC028502 EMBL:BC114968 IPI:IPI00125570
RefSeq:NP_067477.1 UniGene:Mm.38746 ProteinModelPortal:Q9JME7
SMR:Q9JME7 IntAct:Q9JME7 STRING:Q9JME7 PhosphoSite:Q9JME7
PaxDb:Q9JME7 PRIDE:Q9JME7 DNASU:59005 Ensembl:ENSMUST00000015157
GeneID:59005 KEGG:mmu:59005 UCSC:uc009ntj.2
GeneTree:ENSGT00510000047505 InParanoid:Q9JME7 NextBio:314530
Bgee:Q9JME7 CleanEx:MM_TRAPPC2L Genevestigator:Q9JME7
Uniprot:Q9JME7
Length = 139
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 40/131 (30%), Positives = 64/131 (48%)
Query: 9 MVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVWQ-----TDH--MYLKT 61
++ +E+ PLY R ++E K++Y + H SLD++DE++ D +YL
Sbjct: 7 VIAKENYPLYIRS----TPTESELKFHY--MVHTSLDVVDEKISAMGKALVDQRELYLGL 60
Query: 62 IDKFNDMMVSAFVTPTGVKFLMVHDSKN----EEGIKKFFTSVYELFIKYSLNPFYKINT 117
+ D V +VT + VKF+MV DS N + I+ F ++ + NPFY
Sbjct: 61 LYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGD 120
Query: 118 PINSTYFDSKV 128
I S FD+ V
Sbjct: 121 RIQSRAFDTMV 131
>UNIPROTKB|Q9UL33 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783
GO:GO:0005794 GO:GO:0005737 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 CTD:51693
eggNOG:NOG238004 HOGENOM:HOG000230646 HOVERGEN:HBG056603
OrthoDB:EOG4N8R62 OMA:CNPFYIP EMBL:AF089106 EMBL:AF161524
EMBL:AK126779 EMBL:AK311885 EMBL:BC011369 EMBL:BC018024
EMBL:BC105809 IPI:IPI00007819 IPI:IPI00644084 RefSeq:NP_057293.1
UniGene:Hs.461722 ProteinModelPortal:Q9UL33 SMR:Q9UL33
IntAct:Q9UL33 STRING:Q9UL33 PhosphoSite:Q9UL33 DMDM:74721024
PaxDb:Q9UL33 PRIDE:Q9UL33 Ensembl:ENST00000301021 GeneID:51693
KEGG:hsa:51693 UCSC:uc002fmc.3 UCSC:uc002fmd.3
GeneCards:GC16P088923 H-InvDB:HIX0019527 HGNC:HGNC:30887
HPA:HPA041714 MIM:610970 neXtProt:NX_Q9UL33 PharmGKB:PA145147879
InParanoid:Q9UL33 PhylomeDB:Q9UL33 GenomeRNAi:51693 NextBio:55706
Bgee:Q9UL33 CleanEx:HS_TRAPPC2L Genevestigator:Q9UL33
Uniprot:Q9UL33
Length = 140
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 9 MVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVWQ-----TDH--MYLKT 61
++ +E+ PLY R +NE K++Y + H SLD++DE++ D +YL
Sbjct: 7 VIAKENYPLYIRS----TPTENELKFHY--MVHTSLDVVDEKISAMGKALVDQRELYLGL 60
Query: 62 IDKFNDMMVSAFVTPTGVKFLMVHDSKN----EEGIKKFFTSVYELFIKYSLNPFYKINT 117
+ D V +VT + VKF+MV DS N + I+ F ++ + NPFY
Sbjct: 61 LYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGD 120
Query: 118 PINSTY-FDSKV 128
I S+ FD+ V
Sbjct: 121 RIQSSRAFDNMV 132
>UNIPROTKB|F1MIB4 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9913 "Bos taurus" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] InterPro:IPR006722 InterPro:IPR011012
Pfam:PF04628 GO:GO:0005737 GO:GO:0006888 SUPFAM:SSF64356
PANTHER:PTHR12403 IPI:IPI00854544 OMA:CNPFYIP
GeneTree:ENSGT00510000047505 EMBL:DAAA02046256
Ensembl:ENSBTAT00000025533 Uniprot:F1MIB4
Length = 139
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 40/127 (31%), Positives = 60/127 (47%)
Query: 13 EDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVWQ-----TDH--MYLKTIDKF 65
++ PLY R +NE K++Y + H SLD++DE++ D +YL +
Sbjct: 11 QNYPLYIRSIP----TENELKFHY--MVHTSLDVVDEKISAMGKALVDQRELYLGLLYPT 64
Query: 66 NDMMVSAFVTPTGVKFLMVHDSKN----EEGIKKFFTSVYELFIKYSLNPFYKINTPINS 121
D V +VT + VKF+MV DS N + I+ F ++ + NPFY I S
Sbjct: 65 EDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQS 124
Query: 122 TYFDSKV 128
FD V
Sbjct: 125 RAFDGMV 131
>UNIPROTKB|H3BP13 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 HGNC:HGNC:30887
ProteinModelPortal:H3BP13 SMR:H3BP13 PRIDE:H3BP13
Ensembl:ENST00000565504 Bgee:H3BP13 Uniprot:H3BP13
Length = 241
Score = 126 (49.4 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 38/126 (30%), Positives = 61/126 (48%)
Query: 9 MVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVWQ-----TDH--MYLKT 61
++ +E+ PLY R +NE K++Y + H SLD++DE++ D +YL
Sbjct: 7 VIAKENYPLYIRS----TPTENELKFHY--MVHTSLDVVDEKISAMGKALVDQRELYLGL 60
Query: 62 IDKFNDMMVSAFVTPTGVKFLMVHDSKN----EEGIKKFFTSVYELFIKYSLNPFYKINT 117
+ D V +VT + VKF+MV DS N + I+ F ++ + NPFY
Sbjct: 61 LYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGD 120
Query: 118 PINSTY 123
I S +
Sbjct: 121 RIQSRW 126
>WB|WBGene00044604 [details] [associations]
symbol:T10F2.5 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] InterPro:IPR006722 InterPro:IPR011012
Pfam:PF04628 GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356
EMBL:FO081201 EMBL:FO081619 PANTHER:PTHR12403
GeneTree:ENSGT00510000047505 RefSeq:NP_001033370.1
UniGene:Cel.32560 ProteinModelPortal:G4SNB8 SMR:G4SNB8
EnsemblMetazoa:T10F2.5 GeneID:3896754 KEGG:cel:CELE_T10F2.5
CTD:3896754 WormBase:T10F2.5 OMA:EIRLIFK NextBio:958833
Uniprot:G4SNB8
Length = 137
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 37 EFIAHASLDLLDEQVWQTDHMYLKTIDKFNDMMVSAF--VTPTGVKFLMVHD-----SKN 89
E SLD++DE+ + M+L + +ND +F +T TGV+ ++V D S
Sbjct: 33 EMFTFCSLDIVDEKSTKASEMFLGQL--YNDQKWRSFGYITNTGVRMILVLDATSAASLK 90
Query: 90 EEGIKKFFTSVYELFIKYSLNPFYKINTPINSTYFDSKVNFL 131
++ I+ F + + NPFY+I TP+ S + D +N L
Sbjct: 91 DQEIRLIFKRFHGHYCNTISNPFYEIGTPMQSKWLDEGINDL 132
>UNIPROTKB|F1S6M0 [details] [associations]
symbol:TRAPPC2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005737 GO:GO:0006888
SUPFAM:SSF64356 PANTHER:PTHR12403 OMA:CNPFYIP
GeneTree:ENSGT00510000047505 EMBL:FP102571
Ensembl:ENSSSCT00000002936 Uniprot:F1S6M0
Length = 141
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 9 MVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVWQ-----TDH--MYLKT 61
++ +E+ PLY R EN+ + ++ H SLD++DE++ D +YL
Sbjct: 7 VIAKENYPLYIRSVP------TENELQFHYMLHTSLDVVDEKISAMGKALVDQRELYLGL 60
Query: 62 IDKFNDMMVSAF--VTPTGVKFLMVHDSKN----EEGIKKFFTSVYELFIKYSLNPFYKI 115
+ D ++ VT + VKF+MV DS N + I+ F ++ + NPFY
Sbjct: 61 LYPTEDYKRCSYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHSSYTDVMCNPFYTP 120
Query: 116 NTPINSTYFDSKV 128
I S FDS V
Sbjct: 121 GDRIQSRAFDSMV 133
>FB|FBgn0033605 [details] [associations]
symbol:CG9067 species:7227 "Drosophila melanogaster"
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 EMBL:AE013599 GO:GO:0005622
GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403 eggNOG:NOG238004
OMA:CNPFYIP GeneTree:ENSGT00510000047505 RefSeq:NP_610662.1
UniGene:Dm.16172 ProteinModelPortal:A1Z8I0 SMR:A1Z8I0 STRING:A1Z8I0
PRIDE:A1Z8I0 EnsemblMetazoa:FBtr0088182 GeneID:36197
KEGG:dme:Dmel_CG9067 UCSC:CG9067-RA FlyBase:FBgn0033605
InParanoid:A1Z8I0 OrthoDB:EOG4J6Q79 PhylomeDB:A1Z8I0
GenomeRNAi:36197 NextBio:797298 Bgee:A1Z8I0 Uniprot:A1Z8I0
Length = 138
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 35/137 (25%), Positives = 66/137 (48%)
Query: 5 YYFVMVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQVW------QTDHMY 58
+ ++G+++ PLY +D E + ++ +A+LD+++E+ ++ +Y
Sbjct: 3 FCIAVIGKDNAPLYLT------TSDMEQELELQYHVNAALDVVEEKCLIGKGAPESKELY 56
Query: 59 LKTIDKFNDMMVSAFVTPTGVKFLMVHDSKN----EEGIKKFFTSVYELFIKYSLNPFYK 114
L + + + FVT T VKF++V DS N E ++ F +++ L+ NPFY
Sbjct: 57 LGLLYSTENHKIYGFVTNTRVKFIVVIDSSNVALRENEVRAIFRNLHLLYTDAICNPFYI 116
Query: 115 INTPINSTYFDSKVNFL 131
+ S FD V L
Sbjct: 117 PGESLTSKKFDRAVQKL 133
>DICTYBASE|DDB_G0280827 [details] [associations]
symbol:trappc4 "trafficking protein particle complex
subunit 4" species:44689 "Dictyostelium discoideum" [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005801 "cis-Golgi network"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR007233
InterPro:IPR011012 Pfam:PF04099 dictyBase:DDB_G0280827
GO:GO:0005783 GO:GO:0005794 GenomeReviews:CM000152_GR GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0005801 PANTHER:PTHR23249 EMBL:AAFI02000025
eggNOG:COG5122 RefSeq:XP_641000.1 ProteinModelPortal:Q54UU1
PRIDE:Q54UU1 EnsemblProtists:DDB0252669 GeneID:8621803
KEGG:ddi:DDB_G0280827 OMA:HLLWIIN Uniprot:Q54UU1
Length = 135
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 70 VSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKV 128
+ F T TG+KF ++ D N + +++ VYEL+ Y L NPFY+I I FD K+
Sbjct: 69 LQCFQTHTGIKFYVIADP-NHQQLEELLHGVYELYTDYVLKNPFYEIEMQIRCDLFDYKL 127
Query: 129 NFL 131
N L
Sbjct: 128 NRL 130
>UNIPROTKB|H3BUK6 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 HGNC:HGNC:30887
ProteinModelPortal:H3BUK6 SMR:H3BUK6 Ensembl:ENST00000567895
Bgee:H3BUK6 Uniprot:H3BUK6
Length = 109
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 39 IAHASLDLLDEQVWQ-----TDH--MYLKTIDKFNDMMVSAFVTPTGVKFLMVHDSKN-- 89
+ H SLD++DE++ D +YL + D V +VT + VKF+MV DS N
Sbjct: 1 MVHTSLDVVDEKISAMGKALVDQRELYLGLLYPTEDYKVYGYVTNSKVKFVMVVDSSNTA 60
Query: 90 --EEGIKKFFTSVYELFIKYSLNPFYKINTPINSTYFDSKV 128
+ I+ F ++ + NPFY I S FD+ V
Sbjct: 61 LRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQSRAFDNMV 101
>FB|FBgn0260861 [details] [associations]
symbol:Trs23 species:7227 "Drosophila melanogaster"
[GO:0030008 "TRAPP complex" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 EMBL:AE014134 GO:GO:0016192 GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249 eggNOG:COG5122
GeneTree:ENSGT00510000047061 OMA:VYIVSKS EMBL:BT120293
RefSeq:NP_609247.1 UniGene:Dm.18211 SMR:Q9VLI9 STRING:Q9VLI9
EnsemblMetazoa:FBtr0079730 GeneID:34197 KEGG:dme:Dmel_CG9298
UCSC:CG9298-RA CTD:34197 FlyBase:FBgn0260861 InParanoid:Q9VLI9
OrthoDB:EOG4TQJRZ GenomeRNAi:34197 NextBio:787364 Uniprot:Q9VLI9
Length = 219
Score = 109 (43.4 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 13 EDNPLYQRGFSCKEANDNENKY----YYEFIAHASLDLLDEQVWQTDHMYLKTIDKFNDM 68
E+ P+ + FS + NE + +Y A AS L E ++ + + D F
Sbjct: 90 ENYPINLK-FSRPKMTTNEKIFLASMFYPLFAIAS-QLSPEP--KSSGIEILEADTFT-- 143
Query: 69 MVSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSK 127
+ F T TG+KF+++ ++ GI VYEL+ Y L NPFY + PI FD+K
Sbjct: 144 -LHCFQTLTGIKFIIISET-GLNGIDLLLRKVYELYSDYVLKNPFYSLEMPIRCELFDNK 201
Query: 128 VNFL 131
+ L
Sbjct: 202 LQEL 205
>TAIR|locus:2051457 [details] [associations]
symbol:AT2G20930 "AT2G20930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 EMBL:CP002685 GO:GO:0005622
GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC006234 PANTHER:PTHR12403
OMA:CNPFYIP EMBL:BT025606 EMBL:AK317476 IPI:IPI00519884 PIR:A84595
RefSeq:NP_565493.1 UniGene:At.39634 ProteinModelPortal:Q9SKS7
SMR:Q9SKS7 STRING:Q9SKS7 PRIDE:Q9SKS7 EnsemblPlants:AT2G20930.1
GeneID:816627 KEGG:ath:AT2G20930 TAIR:At2g20930 InParanoid:Q9SKS7
PhylomeDB:Q9SKS7 ProtClustDB:CLSN2688290 ArrayExpress:Q9SKS7
Genevestigator:Q9SKS7 Uniprot:Q9SKS7
Length = 140
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 9 MVGREDNPLYQRGFSCKEANDNENKYYYEFIAHASLDLLDEQV-------WQTDHMYLKT 61
+VG ++NPLY + F+ +A+D ++ I H SLD+++E+V + +L
Sbjct: 7 VVGHQNNPLYIQSFT--DADDALKLHH---IVHCSLDVIEERVNNPKKSGTTLNEAFLGL 61
Query: 62 IDKFNDMMVSAFVTPTGVKFLMVHDSKN--EEGIKKFFTSVYELFIKYSLNPFYKINTPI 119
+ + V ++T T VKF++V + + ++ FF + ++ NPF+ I
Sbjct: 62 LYPTVNYKVYGYLTNTKVKFILVTTDLDVRDTDVRSFFRKFHAAYVDAVSNPFHVPGKKI 121
Query: 120 NSTYFDSKV-NFLG 132
S F V N +G
Sbjct: 122 TSRTFAQTVSNIVG 135
>ZFIN|ZDB-GENE-040426-1734 [details] [associations]
symbol:trappc4 "trafficking protein particle
complex 4" species:7955 "Danio rerio" [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099
ZFIN:ZDB-GENE-040426-1734 GO:GO:0006888 SUPFAM:SSF64356
GO:GO:0005801 PANTHER:PTHR23249 eggNOG:COG5122 CTD:51399
HOGENOM:HOG000165618 HOVERGEN:HBG054226 OrthoDB:EOG4JT06F
EMBL:BC059594 IPI:IPI00502097 RefSeq:NP_957058.1 UniGene:Dr.82687
ProteinModelPortal:Q6PBT2 SMR:Q6PBT2 STRING:Q6PBT2 DNASU:393737
GeneID:393737 KEGG:dre:393737 InParanoid:Q6PBT2 NextBio:20814738
ArrayExpress:Q6PBT2 Uniprot:Q6PBT2
Length = 219
Score = 106 (42.4 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 67 DMM-VSAFVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYF 124
DM + F T TG+KF+++ D + + GI +YE++ ++L NPFY + PI F
Sbjct: 140 DMFKLHCFQTLTGIKFIVLADPR-QSGIDALLRKIYEIYSDFALKNPFYSLEMPIRCELF 198
Query: 125 DSKV 128
D +
Sbjct: 199 DQNL 202
>UNIPROTKB|Q2TBL9 [details] [associations]
symbol:TRAPPC4 "Trafficking protein particle complex
subunit 4" species:9913 "Bos taurus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0030008 "TRAPP complex" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA] [GO:0005795 "Golgi stack" evidence=IEA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0005783
GO:GO:0030425 GO:GO:0008021 GO:GO:0005795 GO:GO:0016358
GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249
eggNOG:COG5122 EMBL:BC109939 IPI:IPI00693822 RefSeq:NP_001033591.1
RefSeq:NP_001178133.1 UniGene:Bt.15766 UniGene:Bt.88065
STRING:Q2TBL9 PRIDE:Q2TBL9 Ensembl:ENSBTAT00000010619 GeneID:504391
GeneID:785345 KEGG:bta:504391 KEGG:bta:785345 CTD:51399
GeneTree:ENSGT00510000047061 HOGENOM:HOG000165618
HOVERGEN:HBG054226 InParanoid:Q2TBL9 OMA:VYIVSKS OrthoDB:EOG4JT06F
NextBio:20866638 Uniprot:Q2TBL9
Length = 219
Score = 103 (41.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 73 FVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKV 128
F T TG+KF+++ D + + GI +YE++ ++L NPFY + PI FD +
Sbjct: 147 FQTLTGIKFVVLADPR-QAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNL 202
>UNIPROTKB|E2RSA9 [details] [associations]
symbol:TRAPPC4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0030425 "dendrite" evidence=IEA]
[GO:0030008 "TRAPP complex" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA] [GO:0005795 "Golgi stack" evidence=IEA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0030425
GO:GO:0008021 GO:GO:0005795 GO:GO:0016358 GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249 CTD:51399
GeneTree:ENSGT00510000047061 OMA:VYIVSKS EMBL:AAEX03003442
RefSeq:XP_860256.2 Ensembl:ENSCAFT00000019671 GeneID:479411
KEGG:cfa:479411 NextBio:20854598 Uniprot:E2RSA9
Length = 219
Score = 103 (41.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 73 FVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKV 128
F T TG+KF+++ D + + GI +YE++ ++L NPFY + PI FD +
Sbjct: 147 FQTLTGIKFVVLADPR-QAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNL 202
>UNIPROTKB|F2Z5G7 [details] [associations]
symbol:TRAPPC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030425 "dendrite" evidence=IEA] [GO:0030008 "TRAPP
complex" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0005795 "Golgi stack" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR007233
InterPro:IPR011012 Pfam:PF04099 GO:GO:0030425 GO:GO:0008021
GO:GO:0005795 GO:GO:0016358 GO:GO:0006888 SUPFAM:SSF64356
GO:GO:0030008 PANTHER:PTHR23249 GeneTree:ENSGT00510000047061
OMA:VYIVSKS EMBL:CU695209 RefSeq:XP_003129966.1 UniGene:Ssc.54303
PRIDE:F2Z5G7 Ensembl:ENSSSCT00000016470 GeneID:100516212
KEGG:ssc:100516212 Uniprot:F2Z5G7
Length = 219
Score = 103 (41.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 73 FVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKV 128
F T TG+KF+++ D + + GI +YE++ ++L NPFY + PI FD +
Sbjct: 147 FQTLTGIKFVVLADPR-QAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNL 202
>MGI|MGI:1926211 [details] [associations]
symbol:Trappc4 "trafficking protein particle complex 4"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005795 "Golgi
stack" evidence=IDA] [GO:0005801 "cis-Golgi network" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=TAS] [GO:0016358 "dendrite development"
evidence=IDA] [GO:0030008 "TRAPP complex" evidence=IDA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0045202 "synapse" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0045212 "neurotransmitter receptor
biosynthetic process" evidence=TAS] InterPro:IPR007233
InterPro:IPR011012 Pfam:PF04099 MGI:MGI:1926211 GO:GO:0005783
GO:GO:0005886 GO:GO:0016192 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0008021 GO:GO:0005795 GO:GO:0016358
GO:GO:0045212 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008
PANTHER:PTHR23249 eggNOG:COG5122 CTD:51399
GeneTree:ENSGT00510000047061 HOGENOM:HOG000165618
HOVERGEN:HBG054226 OMA:VYIVSKS OrthoDB:EOG4JT06F ChiTaRS:TRAPPC4
EMBL:AF233340 EMBL:BC038898 EMBL:AK005276 IPI:IPI00112785
RefSeq:NP_068561.1 UniGene:Mm.29814 ProteinModelPortal:Q9ES56
SMR:Q9ES56 IntAct:Q9ES56 STRING:Q9ES56 PhosphoSite:Q9ES56
PaxDb:Q9ES56 PRIDE:Q9ES56 DNASU:60409 Ensembl:ENSMUST00000034623
GeneID:60409 KEGG:mmu:60409 InParanoid:Q9ES56 NextBio:314853
Bgee:Q9ES56 CleanEx:MM_TRAPPC4 Genevestigator:Q9ES56
GermOnline:ENSMUSG00000032112 Uniprot:Q9ES56
Length = 219
Score = 103 (41.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 73 FVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKV 128
F T TG+KF+++ D + + GI +YE++ ++L NPFY + PI FD +
Sbjct: 147 FQTLTGIKFVVLADPR-QAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNL 202
>RGD|1302991 [details] [associations]
symbol:Trappc4 "trafficking protein particle complex 4"
species:10116 "Rattus norvegicus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005795 "Golgi stack"
evidence=IEA;ISO] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA;ISO] [GO:0016358 "dendrite development"
evidence=IEA;ISO] [GO:0030008 "TRAPP complex" evidence=IEA;ISO]
[GO:0030425 "dendrite" evidence=IEA;ISO] [GO:0045202 "synapse"
evidence=ISO] InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099
RGD:1302991 GO:GO:0005783 GO:GO:0030425 GO:GO:0008021 GO:GO:0005795
GO:GO:0016358 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008
PANTHER:PTHR23249 eggNOG:COG5122 CTD:51399
GeneTree:ENSGT00510000047061 HOGENOM:HOG000165618
HOVERGEN:HBG054226 OrthoDB:EOG4JT06F EMBL:AY373378 EMBL:BC098628
IPI:IPI00650101 RefSeq:NP_001003708.1 UniGene:Rn.9580
ProteinModelPortal:Q69BT7 SMR:Q69BT7 STRING:Q69BT7
Ensembl:ENSRNOT00000016145 GeneID:367073 KEGG:rno:367073
UCSC:RGD:1302991 InParanoid:Q69BT7 NextBio:690592
Genevestigator:Q69BT7 Uniprot:Q69BT7
Length = 219
Score = 103 (41.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 73 FVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKV 128
F T TG+KF+++ D + + GI +YE++ ++L NPFY + PI FD +
Sbjct: 147 FQTLTGIKFVVLADPR-QAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNL 202
>UNIPROTKB|F1NU38 [details] [associations]
symbol:TRAPPC4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005801 "cis-Golgi network" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0005801 PANTHER:PTHR23249
GeneTree:ENSGT00510000047061 EMBL:AADN02058035 EMBL:AADN02058036
IPI:IPI00571421 Ensembl:ENSGALT00000012488 ArrayExpress:F1NU38
Uniprot:F1NU38
Length = 210
Score = 102 (41.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 73 FVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKV 128
F T TG+KF+++ D + + GI +YE++ ++L NPFY + PI FD +
Sbjct: 138 FQTLTGIKFVVLADPR-QAGIDALLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNL 193
>UNIPROTKB|F1NXY8 [details] [associations]
symbol:TRAPPC4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0005795 "Golgi stack" evidence=IEA]
[GO:0008021 "synaptic vesicle" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0030008 "TRAPP complex"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0030425
GO:GO:0008021 GO:GO:0005795 GO:GO:0006888 SUPFAM:SSF64356
GO:GO:0030008 PANTHER:PTHR23249 GeneTree:ENSGT00510000047061
OMA:VYIVSKS EMBL:AADN02058035 EMBL:AADN02058036 IPI:IPI00820567
Ensembl:ENSGALT00000040575 ArrayExpress:F1NXY8 Uniprot:F1NXY8
Length = 218
Score = 102 (41.0 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 73 FVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKV 128
F T TG+KF+++ D + + GI +YE++ ++L NPFY + PI FD +
Sbjct: 146 FQTLTGIKFVVLADPR-QAGIDALLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNL 201
>UNIPROTKB|B4DME1 [details] [associations]
symbol:TRAPPC4 "Trafficking protein particle complex
subunit 4" species:9606 "Homo sapiens" [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801
PANTHER:PTHR23249 HOGENOM:HOG000165618 HOVERGEN:HBG054226
UniGene:Hs.132760 HGNC:HGNC:19943 ChiTaRS:TRAPPC4 EMBL:AP003392
EMBL:AK297422 IPI:IPI00910488 SMR:B4DME1 STRING:B4DME1
Ensembl:ENST00000434101 UCSC:uc010ryp.2 Uniprot:B4DME1
Length = 165
Score = 100 (40.3 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 73 FVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKV 128
+ T TG+KF+++ D + + GI +YE++ ++L NPFY + PI FD +
Sbjct: 93 YQTLTGIKFVVLADPR-QAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNL 148
>UNIPROTKB|E9PQE8 [details] [associations]
symbol:TRAPPC4 "Trafficking protein particle complex
subunit 4" species:9606 "Homo sapiens" [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801
PANTHER:PTHR23249 HGNC:HGNC:19943 ChiTaRS:TRAPPC4 EMBL:AP003392
IPI:IPI00982028 ProteinModelPortal:E9PQE8 SMR:E9PQE8
Ensembl:ENST00000528230 ArrayExpress:E9PQE8 Bgee:E9PQE8
Uniprot:E9PQE8
Length = 176
Score = 100 (40.3 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 73 FVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKV 128
+ T TG+KF+++ D + + GI +YE++ ++L NPFY + PI FD +
Sbjct: 104 YQTLTGIKFVVLADPR-QAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNL 159
>UNIPROTKB|E9PKS9 [details] [associations]
symbol:TRAPPC4 "Trafficking protein particle complex
subunit 4" species:9606 "Homo sapiens" [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801
PANTHER:PTHR23249 HGNC:HGNC:19943 ChiTaRS:TRAPPC4 EMBL:AP003392
IPI:IPI00978646 ProteinModelPortal:E9PKS9 SMR:E9PKS9
Ensembl:ENST00000525303 ArrayExpress:E9PKS9 Bgee:E9PKS9
Uniprot:E9PKS9
Length = 126
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 78 GVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKV 128
G+KF+++ D + + GI +YE++ ++L NPFY + PI FD +
Sbjct: 59 GIKFVVLADPR-QAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNL 109
>UNIPROTKB|Q9Y296 [details] [associations]
symbol:TRAPPC4 "Trafficking protein particle complex
subunit 4" species:9606 "Homo sapiens" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0030008 "TRAPP
complex" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005795 "Golgi stack" evidence=ISS] [GO:0008021
"synaptic vesicle" evidence=ISS] [GO:0016358 "dendrite development"
evidence=ISS] [GO:0030425 "dendrite" evidence=ISS] [GO:0045202
"synapse" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0005783
EMBL:CH471065 Pathway_Interaction_DB:syndecan_2_pathway
GO:GO:0030425 GO:GO:0008021 GO:GO:0005795 GO:GO:0016358
GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249
PDB:2J3T PDBsum:2J3T eggNOG:COG5122 CTD:51399 HOGENOM:HOG000165618
HOVERGEN:HBG054226 OMA:VYIVSKS OrthoDB:EOG4JT06F EMBL:AF105025
EMBL:AF078862 EMBL:AF161520 EMBL:AF151862 EMBL:AK290520
EMBL:BC010866 IPI:IPI00007691 RefSeq:NP_057230.1 UniGene:Hs.132760
PDB:2JSN PDB:2ZMV PDBsum:2JSN PDBsum:2ZMV ProteinModelPortal:Q9Y296
SMR:Q9Y296 DIP:DIP-37871N IntAct:Q9Y296 MINT:MINT-1424006
STRING:Q9Y296 PhosphoSite:Q9Y296 DMDM:20178121 PaxDb:Q9Y296
PRIDE:Q9Y296 DNASU:51399 Ensembl:ENST00000533632 GeneID:51399
KEGG:hsa:51399 UCSC:uc010ryn.2 GeneCards:GC11P118889
HGNC:HGNC:19943 HPA:HPA039752 HPA:HPA041371 MIM:610971
neXtProt:NX_Q9Y296 PharmGKB:PA134906910 InParanoid:Q9Y296
PhylomeDB:Q9Y296 ChiTaRS:TRAPPC4 EvolutionaryTrace:Q9Y296
GenomeRNAi:51399 NextBio:54937 ArrayExpress:Q9Y296 Bgee:Q9Y296
CleanEx:HS_TRAPPC4 Genevestigator:Q9Y296 GermOnline:ENSG00000196655
Uniprot:Q9Y296
Length = 219
Score = 100 (40.3 bits), Expect = 0.00014, P = 0.00014
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 73 FVTPTGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKV 128
+ T TG+KF+++ D + + GI +YE++ ++L NPFY + PI FD +
Sbjct: 147 YQTLTGIKFVVLADPR-QAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNL 202
>WB|WBGene00018088 [details] [associations]
symbol:F36D4.2 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801
PANTHER:PTHR23249 eggNOG:COG5122 GeneTree:ENSGT00510000047061
HOGENOM:HOG000165618 OMA:VYIVSKS EMBL:FO081027 PIR:T29312
RefSeq:NP_505435.1 UniGene:Cel.3721 ProteinModelPortal:Q20100
SMR:Q20100 DIP:DIP-27425N IntAct:Q20100 MINT:MINT-1054082
STRING:Q20100 PaxDb:Q20100 EnsemblMetazoa:F36D4.2 GeneID:185357
KEGG:cel:CELE_F36D4.2 UCSC:F36D4.2 CTD:185357 WormBase:F36D4.2
InParanoid:Q20100 NextBio:927984 Uniprot:Q20100
Length = 224
Score = 98 (39.6 bits), Expect = 0.00050, P = 0.00050
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 77 TGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKVNFL 131
TGVKF+++ + + + +YEL+ ++L NPFY I+ PI + FD + L
Sbjct: 156 TGVKFVVITSAASNIAADSLLSKMYELYTDFALKNPFYSIDMPIRAQKFDEAIKTL 211
>UNIPROTKB|Q20100 [details] [associations]
symbol:F36D4.2 "Protein F36D4.2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099
GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0005801 PANTHER:PTHR23249
eggNOG:COG5122 GeneTree:ENSGT00510000047061 HOGENOM:HOG000165618
OMA:VYIVSKS EMBL:FO081027 PIR:T29312 RefSeq:NP_505435.1
UniGene:Cel.3721 ProteinModelPortal:Q20100 SMR:Q20100
DIP:DIP-27425N IntAct:Q20100 MINT:MINT-1054082 STRING:Q20100
PaxDb:Q20100 EnsemblMetazoa:F36D4.2 GeneID:185357
KEGG:cel:CELE_F36D4.2 UCSC:F36D4.2 CTD:185357 WormBase:F36D4.2
InParanoid:Q20100 NextBio:927984 Uniprot:Q20100
Length = 224
Score = 98 (39.6 bits), Expect = 0.00050, P = 0.00050
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 77 TGVKFLMVHDSKNEEGIKKFFTSVYELFIKYSL-NPFYKINTPINSTYFDSKVNFL 131
TGVKF+++ + + + +YEL+ ++L NPFY I+ PI + FD + L
Sbjct: 156 TGVKFVVITSAASNIAADSLLSKMYELYTDFALKNPFYSIDMPIRAQKFDEAIKTL 211
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 139 139 0.00091 102 3 11 22 0.40 31
30 0.46 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 53
No. of states in DFA: 583 (62 KB)
Total size of DFA: 146 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.91u 0.10s 15.01t Elapsed: 00:00:04
Total cpu time: 14.92u 0.10s 15.02t Elapsed: 00:00:04
Start: Thu Aug 15 15:27:31 2013 End: Thu Aug 15 15:27:35 2013