BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3415
(176 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q15X84|ARLY_PSEA6 Argininosuccinate lyase OS=Pseudoalteromonas atlantica (strain T6c
/ ATCC BAA-1087) GN=argH PE=3 SV=1
Length = 458
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 132 DTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTMIKHLTKN 176
D RKLHTGRSRND + TD RL+TR+H+D+++E + +I L N
Sbjct: 98 DVARKLHTGRSRNDQVATDFRLWTREHVDLLVEDVEAVIASLVGN 142
>sp|C5CRT0|ARLY_VARPS Argininosuccinate lyase OS=Variovorax paradoxus (strain S110)
GN=argH PE=3 SV=1
Length = 465
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 107 KLESSALSEEMDSSSLSSGGQLRCC----DTGRKLHTGRSRNDMIVTDLRLYTRKHIDII 162
++ES A ++D + + R D G++LHTGRSRND + TD+RL+ R ID+I
Sbjct: 77 EIESGAFEWKLDLEDVHLNIEARLTQLVGDAGKRLHTGRSRNDQVATDVRLWLRGEIDLI 136
Query: 163 IELLLTM 169
ELL+ +
Sbjct: 137 AELLVAL 143
>sp|Q6FFB2|ARLY_ACIAD Argininosuccinate lyase OS=Acinetobacter sp. (strain ADP1) GN=argH
PE=3 SV=1
Length = 477
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTMIKHL 173
R TG+KLHTGRSRND + TD+RLY R ID I+ +LL + K L
Sbjct: 110 RIGITGKKLHTGRSRNDQVATDIRLYLRDEIDDILTILLRLQKGL 154
>sp|Q2SQ67|ARLY_HAHCH Argininosuccinate lyase OS=Hahella chejuensis (strain KCTC 2396)
GN=argH PE=3 SV=1
Length = 468
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 133 TGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTMIKHLT 174
TG+KLHTGRSRND + TD+RLY R +D+I LL +I L
Sbjct: 105 TGKKLHTGRSRNDQVATDIRLYLRDEVDVIAAELLRLIAALA 146
>sp|B4S0H4|ARLY_ALTMD Argininosuccinate lyase OS=Alteromonas macleodii (strain DSM 17117
/ Deep ecotype) GN=argH PE=3 SV=1
Length = 460
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 13/70 (18%)
Query: 104 NIHKLESSALSEEMDSSSLSSGGQLRCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIII 163
+IH +AL E++ D GRKLHTGRSRND + TD RL+ R+HI +
Sbjct: 83 DIHSFVEAALIEKLG-------------DIGRKLHTGRSRNDQVATDFRLWVREHIASLR 129
Query: 164 ELLLTMIKHL 173
+L +IK L
Sbjct: 130 ADVLGVIKSL 139
>sp|Q2L1J6|ARLY_BORA1 Argininosuccinate lyase OS=Bordetella avium (strain 197N) GN=argH
PE=3 SV=1
Length = 470
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 29/35 (82%)
Query: 132 DTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELL 166
D G++LHTGRSRND + TD+RL+ R ID++I+LL
Sbjct: 111 DAGKRLHTGRSRNDQVATDIRLWLRDEIDLLIDLL 145
>sp|B0VMC7|ARLY_ACIBS Argininosuccinate lyase OS=Acinetobacter baumannii (strain SDF)
GN=argH PE=3 SV=1
Length = 477
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTMIKHL 173
R TG+KLHTGRSRND + TD+RLY R ID I+ LL + K L
Sbjct: 110 RIGITGKKLHTGRSRNDQVATDIRLYLRDEIDDILGLLERLQKGL 154
>sp|B2I1W9|ARLY_ACIBC Argininosuccinate lyase OS=Acinetobacter baumannii (strain ACICU)
GN=argH PE=3 SV=1
Length = 477
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTMIKHL 173
R TG+KLHTGRSRND + TD+RLY R ID I+ LL + K L
Sbjct: 110 RIGITGKKLHTGRSRNDQVATDIRLYLRDEIDDILGLLERLQKGL 154
>sp|B0VDE4|ARLY_ACIBY Argininosuccinate lyase OS=Acinetobacter baumannii (strain AYE)
GN=argH PE=3 SV=1
Length = 477
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTMIKHL 173
R TG+KLHTGRSRND + TD+RLY R ID I+ LL + K L
Sbjct: 110 RIGITGKKLHTGRSRNDQVATDIRLYLRDEIDDILGLLERLQKGL 154
>sp|B7I338|ARLY_ACIB5 Argininosuccinate lyase OS=Acinetobacter baumannii (strain AB0057)
GN=argH PE=3 SV=1
Length = 477
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTMIKHL 173
R TG+KLHTGRSRND + TD+RLY R ID I+ LL + K L
Sbjct: 110 RIGITGKKLHTGRSRNDQVATDIRLYLRDEIDDILGLLERLQKGL 154
>sp|B7H1L9|ARLY_ACIB3 Argininosuccinate lyase OS=Acinetobacter baumannii (strain
AB307-0294) GN=argH PE=3 SV=1
Length = 477
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTMIKHL 173
R TG+KLHTGRSRND + TD+RLY R ID I+ LL + K L
Sbjct: 110 RIGITGKKLHTGRSRNDQVATDIRLYLRDEIDDILGLLERLQKGL 154
>sp|A2BTV0|ARLY_PROM5 Argininosuccinate lyase OS=Prochlorococcus marinus (strain MIT
9515) GN=argH PE=3 SV=1
Length = 459
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 132 DTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELL 166
DTG+KLHTGRSRND + TD+RL+ RK ID I LL
Sbjct: 98 DTGKKLHTGRSRNDQVGTDIRLWLRKKIDTIDNLL 132
>sp|A1TNJ5|ARLY_ACIAC Argininosuccinate lyase OS=Acidovorax citrulli (strain AAC00-1)
GN=argH PE=3 SV=1
Length = 485
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 106 HKLESSALSEEMDSSSLSSGGQLRCC----DTGRKLHTGRSRNDMIVTDLRLYTRKHIDI 161
++ES A ++D + + R D G++LHTGRSRND + TD+RL+ R ID+
Sbjct: 84 QEIESGAFEWKLDLEDVHLNIEARLTQLVGDAGKRLHTGRSRNDQVATDVRLWLRGEIDM 143
Query: 162 IIELL 166
I +LL
Sbjct: 144 IADLL 148
>sp|A1AX52|ARLY_RUTMC Argininosuccinate lyase OS=Ruthia magnifica subsp. Calyptogena
magnifica GN=argH PE=3 SV=1
Length = 480
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 25/29 (86%)
Query: 132 DTGRKLHTGRSRNDMIVTDLRLYTRKHID 160
DTG+KLHTGRSRND IVTD+RLY R +D
Sbjct: 121 DTGKKLHTGRSRNDQIVTDIRLYLRDQVD 149
>sp|B0K4D9|ARLY_THEPX Argininosuccinate lyase OS=Thermoanaerobacter sp. (strain X514)
GN=argH PE=3 SV=1
Length = 441
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 30/45 (66%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTMIKHL 173
+ D GRKLHTGRSRND + TD RLY R ID I E L+ +I L
Sbjct: 91 KIGDVGRKLHTGRSRNDQVATDERLYLRDEIDKIKEDLIKLIDTL 135
>sp|B0KBW6|ARLY_THEP3 Argininosuccinate lyase OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=argH PE=3 SV=1
Length = 441
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 30/45 (66%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTMIKHL 173
+ D GRKLHTGRSRND + TD RLY R ID I E L+ +I L
Sbjct: 91 KIGDVGRKLHTGRSRNDQVATDERLYLRDEIDKIKEDLIKLIDTL 135
>sp|B8GSV2|ARLY_THISH Argininosuccinate lyase OS=Thioalkalivibrio sp. (strain HL-EbGR7)
GN=argH PE=3 SV=1
Length = 467
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 112 ALSEEMDSSSLSSGGQL--RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIE 164
A S E++ ++ +L R D G+KLHTGRSRND + TD+RLY R+ ID +++
Sbjct: 82 AWSVELEDVHMNVEARLIERIGDVGKKLHTGRSRNDQVATDIRLYLREAIDALMQ 136
>sp|Q8R7C3|ARLY_THETN Argininosuccinate lyase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=argH PE=3
SV=1
Length = 439
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 30/45 (66%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTMIKHL 173
+ D GRKLHTGRSRND + TD RLY R ID I E L+ +I L
Sbjct: 91 KIGDVGRKLHTGRSRNDQVATDERLYLRDEIDKIKEDLIKLIDTL 135
>sp|Q82TN0|ARLY_NITEU Argininosuccinate lyase OS=Nitrosomonas europaea (strain ATCC 19718
/ NBRC 14298) GN=argH PE=3 SV=1
Length = 461
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 132 DTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
D G+KLHT RSRND + TD+RLY R ID II+L+ T+
Sbjct: 101 DAGKKLHTARSRNDQVATDIRLYLRTAIDEIIDLIHTL 138
>sp|Q474V6|ARLY_CUPPJ Argininosuccinate lyase OS=Cupriavidus pinatubonensis (strain
JMP134 / LMG 1197) GN=argH PE=3 SV=1
Length = 470
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 132 DTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELL 166
D G++LHTGRSRND + TD+RL+ R ID II LL
Sbjct: 106 DAGKRLHTGRSRNDQVATDIRLWLRSEIDNIIALL 140
>sp|Q8CT81|ARLY_STAES Argininosuccinate lyase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=argH PE=3 SV=1
Length = 463
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R + G KLHTGRSRND + TD+ LYT++ + IIEL+ +
Sbjct: 96 RIGEAGGKLHTGRSRNDQVATDMHLYTKEQVQYIIELIASF 136
>sp|Q5HQK1|ARLY_STAEQ Argininosuccinate lyase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=argH PE=3 SV=1
Length = 463
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R + G KLHTGRSRND + TD+ LYT++ + IIEL+ +
Sbjct: 96 RIGEAGGKLHTGRSRNDQVATDMHLYTKEQVQYIIELIASF 136
>sp|A8G1Z9|ARLY_PROM2 Argininosuccinate lyase OS=Prochlorococcus marinus (strain MIT
9215) GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
Query: 132 DTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLT 168
+TG+KLHTGRSRND + TD+RL+ RK ID IE+L+T
Sbjct: 98 ETGKKLHTGRSRNDQVGTDIRLWLRKEID-KIEILIT 133
>sp|Q49W99|ARLY_STAS1 Argininosuccinate lyase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=argH
PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTMIKHLTKN 176
R D G +LHTGRSRND + TD+ LYT+ ++ +IE L+T +H N
Sbjct: 96 RIGDAGGRLHTGRSRNDQVATDMHLYTKAEVNALIE-LITQFQHTIVN 142
>sp|Q7VVG6|ARLY_BORPE Argininosuccinate lyase OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=argH PE=3 SV=1
Length = 473
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 132 DTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELL 166
D G++LHTGRSRND + TD+RL+ R ID +++LL
Sbjct: 112 DAGKRLHTGRSRNDQVATDIRLWLRDEIDTLVDLL 146
>sp|Q7WAE4|ARLY_BORPA Argininosuccinate lyase OS=Bordetella parapertussis (strain 12822 /
ATCC BAA-587 / NCTC 13253) GN=argH PE=3 SV=2
Length = 473
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 132 DTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELL 166
D G++LHTGRSRND + TD+RL+ R ID +++LL
Sbjct: 112 DAGKRLHTGRSRNDQVATDIRLWLRDEIDTLVDLL 146
>sp|Q7WJI7|ARLY_BORBR Argininosuccinate lyase OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=argH PE=3 SV=1
Length = 473
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 132 DTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELL 166
D G++LHTGRSRND + TD+RL+ R ID +++LL
Sbjct: 112 DAGKRLHTGRSRNDQVATDIRLWLRDEIDTLVDLL 146
>sp|Q1IIZ3|ARLY_KORVE Argininosuccinate lyase OS=Koribacter versatilis (strain Ellin345)
GN=argH PE=3 SV=1
Length = 464
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 132 DTGRKLHTGRSRNDMIVTDLRLYTRKHID 160
+ GRKLHTGRSRN+ I TDLRLY R+ ID
Sbjct: 95 EVGRKLHTGRSRNEQIATDLRLYVREQID 123
>sp|P63583|ARLY_STAAN Argininosuccinate lyase OS=Staphylococcus aureus (strain N315)
GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|P63582|ARLY_STAAM Argininosuccinate lyase OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|A6QFH1|ARLY_STAAE Argininosuccinate lyase OS=Staphylococcus aureus (strain Newman)
GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|Q5HHC5|ARLY_STAAC Argininosuccinate lyase OS=Staphylococcus aureus (strain COL)
GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|A5IRD8|ARLY_STAA9 Argininosuccinate lyase OS=Staphylococcus aureus (strain JH9)
GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|Q2FZU2|ARLY_STAA8 Argininosuccinate lyase OS=Staphylococcus aureus (strain NCTC 8325)
GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|A6U067|ARLY_STAA2 Argininosuccinate lyase OS=Staphylococcus aureus (strain JH1)
GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|A7X0H4|ARLY_STAA1 Argininosuccinate lyase OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|Q8NXF3|ARLY_STAAW Argininosuccinate lyase OS=Staphylococcus aureus (strain MW2)
GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|A8Z066|ARLY_STAAT Argininosuccinate lyase OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|Q6GAW6|ARLY_STAAS Argininosuccinate lyase OS=Staphylococcus aureus (strain MSSA476)
GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|Q2FIB5|ARLY_STAA3 Argininosuccinate lyase OS=Staphylococcus aureus (strain USA300)
GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|Q2YWS5|ARLY_STAAB Argininosuccinate lyase OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=argH PE=3 SV=1
Length = 459
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|Q6GIC8|ARLY_STAAR Argininosuccinate lyase OS=Staphylococcus aureus (strain MRSA252)
GN=argH PE=3 SV=1
Length = 459
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R D G KLHTGRSRND + TD+ LYT+K + II L+ ++
Sbjct: 96 RIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSL 136
>sp|A1WVT8|ARLY_HALHL Argininosuccinate lyase OS=Halorhodospira halophila (strain DSM 244
/ SL1) GN=argH PE=3 SV=1
Length = 465
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 18/69 (26%)
Query: 94 TPQTSTIHHNNIHKLESSALSEEMDSSSLSSGGQLRCCDTGRKLHTGRSRNDMIVTDLRL 153
+PQ +H N H+L R + G+KLHTGRSRND I TD+RL
Sbjct: 86 SPQLEDVHMNIEHRLTQ------------------RIGEAGKKLHTGRSRNDQIATDVRL 127
Query: 154 YTRKHIDII 162
+ R+ ID I
Sbjct: 128 FLREAIDTI 136
>sp|Q1LJQ2|ARLY_RALME Argininosuccinate lyase OS=Ralstonia metallidurans (strain CH34 /
ATCC 43123 / DSM 2839) GN=argH PE=3 SV=1
Length = 469
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 107 KLESSALSEEMDSSSLSSGGQLRCC----DTGRKLHTGRSRNDMIVTDLRLYTRKHIDII 162
++ES A ++D + + R D G++LHTGRSRND + TD+RL+ R ID I
Sbjct: 76 EIESGAFEWKLDLEDVHLNIEARLTALVGDAGKRLHTGRSRNDQVATDIRLWLRSEIDSI 135
Query: 163 IELL 166
+ LL
Sbjct: 136 VGLL 139
>sp|Q1I314|ARLY_PSEE4 Argininosuccinate lyase OS=Pseudomonas entomophila (strain L48)
GN=argH PE=3 SV=1
Length = 464
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIII 163
R TG+KLHTGRSRND + TD+RL+ R IDII+
Sbjct: 100 RIGITGKKLHTGRSRNDQVATDIRLWLRDEIDIIL 134
>sp|B8I1A0|ARLY_CLOCE Argininosuccinate lyase OS=Clostridium cellulolyticum (strain ATCC
35319 / DSM 5812 / JCM 6584 / H10) GN=argH PE=3 SV=1
Length = 459
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTMIKHLTK 175
R DTG+KLHTGRSRND + D+R+Y R I I E++ ++ L K
Sbjct: 94 RIGDTGKKLHTGRSRNDQVALDIRMYLRDEIISIKEMVAVLLNTLVK 140
>sp|Q31DH2|ARLY_PROM9 Argininosuccinate lyase OS=Prochlorococcus marinus (strain MIT
9312) GN=argH PE=3 SV=1
Length = 459
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
Query: 132 DTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLT 168
+TG+KLHTGRSRND + TDLRL+ RK ID +E+L+T
Sbjct: 98 ETGKKLHTGRSRNDQVGTDLRLWLRKEID-NLEILIT 133
>sp|A2SET3|ARLY_METPP Argininosuccinate lyase OS=Methylibium petroleiphilum (strain PM1)
GN=argH PE=3 SV=1
Length = 467
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 105 IHKLESSALSEEMDSSSLSSGGQLRCC----DTGRKLHTGRSRNDMIVTDLRLYTRKHID 160
+ ++ES A ++D + + R D G++LHTGRSRND + TD+RL+ R ID
Sbjct: 76 VAEIESGAFEWKLDLEDVHLNIEARLTQLVGDAGKRLHTGRSRNDQVATDVRLWLRGEID 135
Query: 161 IIIELLLTMIKHLT 174
I LL + + L
Sbjct: 136 AIGALLSALQRALV 149
>sp|Q609I6|ARLY_METCA Argininosuccinate lyase OS=Methylococcus capsulatus (strain ATCC
33009 / NCIMB 11132 / Bath) GN=argH PE=3 SV=1
Length = 465
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIIIELLLTM 169
R + G+KLHTGRSRND + TD+RLY R ID I ++L +
Sbjct: 98 RIGEAGKKLHTGRSRNDQVATDVRLYLRTEIDRICGMILRL 138
>sp|A4XNY5|ARLY_PSEMY Argininosuccinate lyase OS=Pseudomonas mendocina (strain ymp)
GN=argH PE=3 SV=1
Length = 464
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 129 RCCDTGRKLHTGRSRNDMIVTDLRLYTRKHIDIII 163
R TG+KLHTGRSRND + TD+RL+ R ID+I+
Sbjct: 100 RIGVTGKKLHTGRSRNDQVATDIRLWLRDEIDVIL 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.130 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,140,354
Number of Sequences: 539616
Number of extensions: 3014294
Number of successful extensions: 7916
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 7323
Number of HSP's gapped (non-prelim): 621
length of query: 176
length of database: 191,569,459
effective HSP length: 110
effective length of query: 66
effective length of database: 132,211,699
effective search space: 8725972134
effective search space used: 8725972134
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)