Query psy3418
Match_columns 119
No_of_seqs 113 out of 989
Neff 5.6
Searched_HMMs 29240
Date Sat Aug 17 00:31:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3418.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3418hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iuq_A Glycerol-3-phosphate ac 99.1 3.7E-11 1.3E-15 98.8 3.0 73 30-109 259-348 (367)
2 2rq6_A ATP synthase epsilon ch 51.0 52 0.0018 22.6 6.4 82 14-101 20-106 (138)
3 3ry0_A Putative tautomerase; o 48.9 34 0.0012 19.7 4.5 30 69-103 3-32 (65)
4 1ytz_T Troponin T; muscle, THI 42.4 23 0.0008 23.9 3.3 27 74-100 34-60 (107)
5 1use_A VAsp, vasodilator-stimu 37.0 39 0.0013 19.6 3.2 26 81-106 3-28 (45)
6 1otf_A 4-oxalocrotonate tautom 33.7 63 0.0022 17.9 4.5 25 80-104 9-33 (62)
7 1j1d_C Troponin I, TNI; THIN f 31.3 51 0.0018 23.1 3.7 27 74-100 50-76 (133)
8 2opa_A Probable tautomerase YW 30.1 74 0.0025 17.6 4.5 23 81-103 10-32 (61)
9 3hmu_A Aminotransferase, class 30.0 78 0.0027 25.2 5.1 43 69-114 423-465 (472)
10 1e52_A Excinuclease ABC subuni 29.1 42 0.0014 20.5 2.6 33 79-111 14-46 (63)
11 3m20_A 4-oxalocrotonate tautom 28.7 71 0.0024 18.2 3.6 24 80-103 8-31 (62)
12 3mb2_A 4-oxalocrotonate tautom 28.3 94 0.0032 18.2 4.5 23 81-103 11-33 (72)
13 2wuj_A Septum site-determining 28.2 35 0.0012 20.2 2.1 27 79-105 17-43 (57)
14 1otg_A 5-carboxymethyl-2-hydro 27.9 91 0.0031 20.7 4.5 32 68-104 62-93 (125)
15 1j1d_B Troponin T, TNT; THIN f 27.5 24 0.00081 23.9 1.4 26 75-100 35-60 (106)
16 2xok_H ATP synthase; hydrolase 25.8 1.1E+02 0.0037 21.7 4.7 82 14-101 50-137 (160)
17 3m21_A Probable tautomerase HP 25.2 80 0.0028 18.2 3.4 24 81-104 13-36 (67)
18 2x4k_A 4-oxalocrotonate tautom 24.9 91 0.0031 17.0 3.5 24 81-104 13-36 (63)
19 3ej9_A Alpha-subunit of trans- 24.2 1.2E+02 0.0042 18.1 4.5 24 80-103 10-33 (76)
20 1owf_B IHF-beta, integration H 21.6 1.1E+02 0.0037 19.2 3.6 25 80-104 15-39 (94)
21 3mlc_A FG41 malonate semialdeh 21.4 83 0.0028 21.2 3.3 24 80-103 9-32 (136)
22 1jid_A Signal recognition part 21.2 1.6E+02 0.0056 20.3 4.8 78 12-98 19-112 (128)
23 4dsu_A GTPase KRAS, isoform 2B 20.3 1.4E+02 0.0049 19.3 4.2 38 75-112 141-178 (189)
24 4e3q_A Pyruvate transaminase; 20.2 1.5E+02 0.005 24.1 5.0 33 70-105 440-472 (473)
No 1
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=99.08 E-value=3.7e-11 Score=98.84 Aligned_cols=73 Identities=11% Similarity=0.185 Sum_probs=61.5
Q ss_pred eEeeccCCCCCCCCc--EEeEEEcCCcccccCC---------CCCcccceeEEEecCcccCCCCC------hhhHHHHHH
Q psy3418 30 KIVIEASPLTPHVVA--TLPPILCTIPYFTNDK---------TKKFDSGRNVISILPPIPTEGLT------KDNVNDLMD 92 (119)
Q Consensus 30 k~~~~~~~~~ka~vP--IVPVvI~gt~~i~p~k---------~~~~~PG~V~V~IlpPI~t~glt------~edi~~L~e 92 (119)
+|| +++|+| |+||+|. ++++||+. ..++++|.|.|.|++||++++++ .++.++|.+
T Consensus 259 ~LA------~ksg~P~hIvPvaI~-t~~imppp~~ve~~~g~~r~i~~~~V~v~ig~pI~~~~l~~~~e~~~e~~~~l~e 331 (367)
T 1iuq_A 259 RLI------QHSDVPGHLFPLALL-CHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSK 331 (367)
T ss_dssp HHH------HTSSSCEEEEEEEEE-CGGGSCCC----------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHH
T ss_pred HHH------HHcCCCceEEEEEEE-eccccCCcccccccccccceeecccEEEEECCccchhhccccccchHHHHHHHHH
Confidence 776 699999 9999999 66899873 33468999999999999998876 455678999
Q ss_pred HHHHHHHHHHHhhcccC
Q psy3418 93 RTYKAMSEEYEKITKEN 109 (119)
Q Consensus 93 ~vr~~m~~~L~~l~~~~ 109 (119)
.|++.|.+.|.++....
T Consensus 332 ~v~~~I~~~y~~l~~~i 348 (367)
T 1iuq_A 332 ALFDSVAMQYNVLKTAI 348 (367)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999887653
No 2
>2rq6_A ATP synthase epsilon chain; F1FO ATP synthase, F1-ATPase, epsilon subunit, ATP synthesis, CF1, hydrogen ION transport, hydrolase; NMR {Thermosynechococcus elongatus} PDB: 2rq7_A
Probab=50.99 E-value=52 Score=22.63 Aligned_cols=82 Identities=4% Similarity=-0.053 Sum_probs=48.6
Q ss_pred eEEEEecCCCcc---ccceeEeeccCCCCCCCCcEEeEEEcCCcccccCCCCCc--ccceeEEEecCcccCCCCChhhHH
Q psy3418 14 TYILVRSKNASV---PASCKIVIEASPLTPHVVATLPPILCTIPYFTNDKTKKF--DSGRNVISILPPIPTEGLTKDNVN 88 (119)
Q Consensus 14 ~~~~~~~~~~~~---~~~~k~~~~~~~~~ka~vPIVPVvI~gt~~i~p~k~~~~--~PG~V~V~IlpPI~t~glt~edi~ 88 (119)
.++.++..+|.+ |+=+=+++- ...=++=+...|.+..+--..+|+ .+..|+|-.-..+..++++.+..+
T Consensus 20 ~~V~~p~~~Ge~GILp~H~p~it~------L~~G~v~i~~~~~~~~~~v~gGf~ev~~~~vtIla~~A~~~~dID~~~a~ 93 (138)
T 2rq6_A 20 EEVILPSTTGQLGILSNHAPLLTA------LETGVMRVRQDREWVAIALMGGFAEVENNEVTILVNGAERGDTIDLEKAK 93 (138)
T ss_dssp SEEEECCTTSCEEEESSCCSEEEE------ECSEEEEEESSSCEEEEEECSEEEEECSSCEEEEESCEECSTTCCHHHHH
T ss_pred EEEEEECCcCCeEEcCCCcceEeE------eccEEEEEEECCeEEEEEEcCcEEEEECCEEEEEEeeEEEhhhCCHHHHH
Confidence 356677777777 544444422 122222222222222221122233 788899988899999999888888
Q ss_pred HHHHHHHHHHHHH
Q psy3418 89 DLMDRTYKAMSEE 101 (119)
Q Consensus 89 ~L~e~vr~~m~~~ 101 (119)
+..++..+.+.+.
T Consensus 94 ~a~~~Ae~~l~~~ 106 (138)
T 2rq6_A 94 AEFAAAQAALAQA 106 (138)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 8888888877654
No 3
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=48.89 E-value=34 Score=19.75 Aligned_cols=30 Identities=23% Similarity=0.261 Sum_probs=23.6
Q ss_pred eEEEecCcccCCCCChhhHHHHHHHHHHHHHHHHH
Q psy3418 69 NVISILPPIPTEGLTKDNVNDLMDRTYKAMSEEYE 103 (119)
Q Consensus 69 V~V~IlpPI~t~glt~edi~~L~e~vr~~m~~~L~ 103 (119)
|+|.+. +|.+.+...+|.+.+.+.+.+.+.
T Consensus 3 i~I~~~-----~Grs~eqk~~L~~~it~~~~~~lg 32 (65)
T 3ry0_A 3 IRVTLL-----EGRSPQEVAALGEALTAAAHETLG 32 (65)
T ss_dssp EEEEEE-----SCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEc-----CCCCHHHHHHHHHHHHHHHHHHhC
Confidence 445554 367889999999999999998874
No 4
>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1
Probab=42.35 E-value=23 Score=23.92 Aligned_cols=27 Identities=15% Similarity=0.320 Sum_probs=22.4
Q ss_pred cCcccCCCCChhhHHHHHHHHHHHHHH
Q psy3418 74 LPPIPTEGLTKDNVNDLMDRTYKAMSE 100 (119)
Q Consensus 74 lpPI~t~glt~edi~~L~e~vr~~m~~ 100 (119)
.+|.+.++++.+++.++..+.+++|..
T Consensus 34 ~~pL~id~l~~~~L~e~~keLh~~I~~ 60 (107)
T 1ytz_T 34 RKPLNIDHLNEDKLRDKAKELWDWLYQ 60 (107)
T ss_dssp CCCCCCSSSCSSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 388999999999988888888887754
No 5
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=36.98 E-value=39 Score=19.59 Aligned_cols=26 Identities=8% Similarity=0.224 Sum_probs=18.1
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhhc
Q psy3418 81 GLTKDNVNDLMDRTYKAMSEEYEKIT 106 (119)
Q Consensus 81 glt~edi~~L~e~vr~~m~~~L~~l~ 106 (119)
+.+..|++.|++++-+-|...+.++.
T Consensus 3 ~~~~~dle~~KqEIL~E~RkElqK~K 28 (45)
T 1use_A 3 SSDYSDLQRVKQELLEEVKKELQKVK 28 (45)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777787777777777776654
No 6
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=33.67 E-value=63 Score=17.90 Aligned_cols=25 Identities=24% Similarity=0.425 Sum_probs=20.3
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHh
Q psy3418 80 EGLTKDNVNDLMDRTYKAMSEEYEK 104 (119)
Q Consensus 80 ~glt~edi~~L~e~vr~~m~~~L~~ 104 (119)
.|.+.+..++|.+.+.+.+.+.+..
T Consensus 9 ~grs~e~k~~l~~~i~~~l~~~lg~ 33 (62)
T 1otf_A 9 EGRTDEQKETLIRQVSEAMANSLDA 33 (62)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 3667788999999999999888743
No 7
>1j1d_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.2
Probab=31.33 E-value=51 Score=23.09 Aligned_cols=27 Identities=19% Similarity=0.304 Sum_probs=21.8
Q ss_pred cCcccCCCCChhhHHHHHHHHHHHHHH
Q psy3418 74 LPPIPTEGLTKDNVNDLMDRTYKAMSE 100 (119)
Q Consensus 74 lpPI~t~glt~edi~~L~e~vr~~m~~ 100 (119)
.+|.+.++++.+++.++..+.+++|..
T Consensus 50 ~~pL~id~ls~~~L~e~~keLh~~I~~ 76 (133)
T 1j1d_C 50 AQPLELAGLGFAELQDLARQLHARVDK 76 (133)
T ss_dssp TCCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 378889999988888888888887744
No 8
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=30.10 E-value=74 Score=17.59 Aligned_cols=23 Identities=22% Similarity=0.390 Sum_probs=19.3
Q ss_pred CCChhhHHHHHHHHHHHHHHHHH
Q psy3418 81 GLTKDNVNDLMDRTYKAMSEEYE 103 (119)
Q Consensus 81 glt~edi~~L~e~vr~~m~~~L~ 103 (119)
|.+.+...+|.+.+.+.+.+.+.
T Consensus 10 grs~eqk~~l~~~i~~~l~~~lg 32 (61)
T 2opa_A 10 GRTDEQKRNLVEKVTEAVKETTG 32 (61)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHhC
Confidence 66778888999999999988764
No 9
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=29.99 E-value=78 Score=25.17 Aligned_cols=43 Identities=23% Similarity=0.433 Sum_probs=33.1
Q ss_pred eEEEecCcccCCCCChhhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy3418 69 NVISILPPIPTEGLTKDNVNDLMDRTYKAMSEEYEKITKENTPPGE 114 (119)
Q Consensus 69 V~V~IlpPI~t~glt~edi~~L~e~vr~~m~~~L~~l~~~~~~~~~ 114 (119)
-.++|.||.- .+.++++++.+.+.+.+.+...++..+.....+
T Consensus 423 ~~iRi~p~~~---~t~e~i~~~l~~l~~~l~~~~~~~~~~~~~~~~ 465 (472)
T 3hmu_A 423 DRMIISPPLV---ITPAEIDEMFVRIRKSLDEAQAEIEKQGLMKSE 465 (472)
T ss_dssp TEEEECCCTT---CCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBT
T ss_pred CEEEEECCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 4678888874 367899999999999988888777777665443
No 10
>1e52_A Excinuclease ABC subunit; DNA excision repair, UVRB, DNA repair, UVRC binding domain; NMR {Escherichia coli} SCOP: a.2.9.1 PDB: 1qoj_A
Probab=29.08 E-value=42 Score=20.48 Aligned_cols=33 Identities=6% Similarity=0.108 Sum_probs=26.5
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy3418 79 TEGLTKDNVNDLMDRTYKAMSEEYEKITKENTP 111 (119)
Q Consensus 79 t~glt~edi~~L~e~vr~~m~~~L~~l~~~~~~ 111 (119)
.+.++.+++..+.+.+++.|.++-.++..|.++
T Consensus 14 ~~~ls~~~~~~~i~~Le~~M~~AA~~leFE~AA 46 (63)
T 1e52_A 14 PMDMSPKALQQKIHELEGLMMQHAQNLEFEEAA 46 (63)
T ss_dssp SCCSCCSHHHHHHHHHHHHHHHHHHTTCHHHHT
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence 345666788999999999999999888876443
No 11
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=28.66 E-value=71 Score=18.25 Aligned_cols=24 Identities=17% Similarity=0.268 Sum_probs=20.0
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHH
Q psy3418 80 EGLTKDNVNDLMDRTYKAMSEEYE 103 (119)
Q Consensus 80 ~glt~edi~~L~e~vr~~m~~~L~ 103 (119)
.|.+.+...+|.+.+.+.+.+.+.
T Consensus 8 ~grt~eqK~~L~~~it~~~~~~lg 31 (62)
T 3m20_A 8 PKLDVGKKREFVERLTSVAAEIYG 31 (62)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhC
Confidence 367888899999999999988774
No 12
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=28.31 E-value=94 Score=18.22 Aligned_cols=23 Identities=13% Similarity=0.284 Sum_probs=19.9
Q ss_pred CCChhhHHHHHHHHHHHHHHHHH
Q psy3418 81 GLTKDNVNDLMDRTYKAMSEEYE 103 (119)
Q Consensus 81 glt~edi~~L~e~vr~~m~~~L~ 103 (119)
|.+.+...+|.+.+.+.+.+.+.
T Consensus 11 grs~eqK~~L~~~it~~l~~~lg 33 (72)
T 3mb2_A 11 GRSTEQKAELARALSAAAAAAFD 33 (72)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHhC
Confidence 67888999999999999998874
No 13
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=28.25 E-value=35 Score=20.18 Aligned_cols=27 Identities=22% Similarity=0.316 Sum_probs=21.9
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHhh
Q psy3418 79 TEGLTKDNVNDLMDRTYKAMSEEYEKI 105 (119)
Q Consensus 79 t~glt~edi~~L~e~vr~~m~~~L~~l 105 (119)
-.||..++++++.++|.+.+...+.+.
T Consensus 17 ~rGY~~~EVD~FLd~v~~~~~~l~~e~ 43 (57)
T 2wuj_A 17 FRGYDEDEVNEFLAQVRKDYEIVLRKK 43 (57)
T ss_dssp TTEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 358999999999999988887766553
No 14
>1otg_A 5-carboxymethyl-2-hydroxymuconate isomerase; 2.10A {Escherichia coli} SCOP: d.80.1.2
Probab=27.95 E-value=91 Score=20.70 Aligned_cols=32 Identities=6% Similarity=0.165 Sum_probs=27.1
Q ss_pred eeEEEecCcccCCCCChhhHHHHHHHHHHHHHHHHHh
Q psy3418 68 RNVISILPPIPTEGLTKDNVNDLMDRTYKAMSEEYEK 104 (119)
Q Consensus 68 ~V~V~IlpPI~t~glt~edi~~L~e~vr~~m~~~L~~ 104 (119)
.|.|+++ +|.+.+..++|.+.+.+.+.+.+..
T Consensus 62 hi~i~i~-----~GRs~eqK~~L~~~v~~~l~~~l~~ 93 (125)
T 1otg_A 62 HMTLKIG-----AGRSLESRQQAGEMLFELIKTHFAA 93 (125)
T ss_dssp EEEEEEC-----TTCCHHHHHHHHHHHHHHHHHHTHH
T ss_pred EEEEEEC-----CCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 5677777 3889999999999999999998864
No 15
>1j1d_B Troponin T, TNT; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.1 PDB: 1j1e_B
Probab=27.50 E-value=24 Score=23.86 Aligned_cols=26 Identities=8% Similarity=0.281 Sum_probs=21.3
Q ss_pred CcccCCCCChhhHHHHHHHHHHHHHH
Q psy3418 75 PPIPTEGLTKDNVNDLMDRTYKAMSE 100 (119)
Q Consensus 75 pPI~t~glt~edi~~L~e~vr~~m~~ 100 (119)
+|.+.++++.+++.++..+.++.|..
T Consensus 35 kpL~id~l~~~~L~e~~keLh~~I~~ 60 (106)
T 1j1d_B 35 KVLAIDHLNEDQLREKAKELWQTIYN 60 (106)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 68889999998888888888887744
No 16
>2xok_H ATP synthase; hydrolase, ATP-binding, F(O), F(1), mitochondr inner membrane, transmembrane; HET: ANP; 3.01A {Saccharomyces cerevisiae}
Probab=25.81 E-value=1.1e+02 Score=21.71 Aligned_cols=82 Identities=11% Similarity=0.131 Sum_probs=46.3
Q ss_pred eEEEEecCCCcc---ccceeEeeccCCCCCCCCcEEeEEEcCCcccccCCCCCc--ccc-eeEEEecCcccCCCCChhhH
Q psy3418 14 TYILVRSKNASV---PASCKIVIEASPLTPHVVATLPPILCTIPYFTNDKTKKF--DSG-RNVISILPPIPTEGLTKDNV 87 (119)
Q Consensus 14 ~~~~~~~~~~~~---~~~~k~~~~~~~~~ka~vPIVPVvI~gt~~i~p~k~~~~--~PG-~V~V~IlpPI~t~glt~edi 87 (119)
..+.++..+|.+ |+=.=+++- ...=++=+...|.++.+--..+++ .+. .|+|-.-..+..++++.+..
T Consensus 50 ~~V~~p~~~Ge~GILp~H~Plit~------L~~G~v~i~~~g~~~~~aV~gGf~eV~~~n~VtIla~~A~~~~dID~~~A 123 (160)
T 2xok_H 50 TQVNLPAKSGRIGVLANHVPTVEQ------LLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENI 123 (160)
T ss_dssp SEEEEECSSSEEEEESSCCCCEEE------ECSSCEEECSSSCCEEECCCCEEEEECTTSCEEEEESCC-CCTTTC-CHH
T ss_pred EEEEEECCccCeEecCCCccceeE------ecceEEEEEECCEEEEEEEcCeEEEEeCCCeEEEEeeeeEehhhCCHHHH
Confidence 456777777776 555444422 111111111133322222223333 565 89999999999999988887
Q ss_pred HHHHHHHHHHHHHH
Q psy3418 88 NDLMDRTYKAMSEE 101 (119)
Q Consensus 88 ~~L~e~vr~~m~~~ 101 (119)
++..++..+.+.+.
T Consensus 124 ~~a~~~Ae~~l~~~ 137 (160)
T 2xok_H 124 KNLLAEAKKNVSSS 137 (160)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcC
Confidence 77888887776543
No 17
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=25.21 E-value=80 Score=18.21 Aligned_cols=24 Identities=21% Similarity=0.324 Sum_probs=20.3
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHh
Q psy3418 81 GLTKDNVNDLMDRTYKAMSEEYEK 104 (119)
Q Consensus 81 glt~edi~~L~e~vr~~m~~~L~~ 104 (119)
+.+.+...+|.+.+.+.+.+.+..
T Consensus 13 grs~eqK~~l~~~lt~~l~~~lg~ 36 (67)
T 3m21_A 13 GPTNEQKQQLIEGVSDLMVKVLNK 36 (67)
T ss_dssp BSCHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCc
Confidence 678889999999999999988743
No 18
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=24.87 E-value=91 Score=17.02 Aligned_cols=24 Identities=13% Similarity=0.306 Sum_probs=19.6
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHh
Q psy3418 81 GLTKDNVNDLMDRTYKAMSEEYEK 104 (119)
Q Consensus 81 glt~edi~~L~e~vr~~m~~~L~~ 104 (119)
|.+.+...+|.+.+.+.+.+.+..
T Consensus 13 g~s~e~k~~l~~~l~~~l~~~lg~ 36 (63)
T 2x4k_A 13 GRSDEQLKNLVSEVTDAVEKTTGA 36 (63)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCc
Confidence 567788899999999999987743
No 19
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=24.18 E-value=1.2e+02 Score=18.12 Aligned_cols=24 Identities=21% Similarity=0.208 Sum_probs=20.3
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHH
Q psy3418 80 EGLTKDNVNDLMDRTYKAMSEEYE 103 (119)
Q Consensus 80 ~glt~edi~~L~e~vr~~m~~~L~ 103 (119)
+|.+.+...+|.+.+.+.+.+.+.
T Consensus 10 ~Grs~eqK~~L~~~it~~l~~~lg 33 (76)
T 3ej9_A 10 YGRTDEQKRALSAGLLRVISEATG 33 (76)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHC
Confidence 367889999999999999988774
No 20
>1owf_B IHF-beta, integration HOST factor beta-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ouz_B 2ht0_B 1ihf_B 1owg_B
Probab=21.57 E-value=1.1e+02 Score=19.16 Aligned_cols=25 Identities=12% Similarity=0.260 Sum_probs=22.2
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHh
Q psy3418 80 EGLTKDNVNDLMDRTYKAMSEEYEK 104 (119)
Q Consensus 80 ~glt~edi~~L~e~vr~~m~~~L~~ 104 (119)
.+++..|.....+.+.+.|.++|.+
T Consensus 15 ~~ls~~~~~~~l~~~~~~i~~~L~~ 39 (94)
T 1owf_B 15 SHIPAKTVEDAVKEMLEHMASTLAQ 39 (94)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4789999999999999999999865
No 21
>3mlc_A FG41 malonate semialdehyde decarboxylase; tautomerase superfamily, malonate semialdehyde decarboxylase alpha-beta-motif; 2.22A {Coryneform bacterium} SCOP: d.80.1.0 PDB: 3mjz_A
Probab=21.39 E-value=83 Score=21.23 Aligned_cols=24 Identities=13% Similarity=0.198 Sum_probs=21.3
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHH
Q psy3418 80 EGLTKDNVNDLMDRTYKAMSEEYE 103 (119)
Q Consensus 80 ~glt~edi~~L~e~vr~~m~~~L~ 103 (119)
+|++.+.+.+|.+.+++.+.+.+.
T Consensus 9 ~Grs~e~k~~L~~~it~al~e~~~ 32 (136)
T 3mlc_A 9 SDRSREQRRAIADAVHDALVEVLA 32 (136)
T ss_dssp TTSCSHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhC
Confidence 578889999999999999999874
No 22
>1jid_A Signal recognition particle 19 kDa protein; signal recognition particle (SRP), protein-RNA complex, GGAG tetraloop, signaling protein/RNA complex; HET: 5BU A23; 1.80A {Homo sapiens} SCOP: d.201.1.1 PDB: 3ktv_B* 1mfq_B* 1ry1_B* 2go5_B 2j37_B
Probab=21.22 E-value=1.6e+02 Score=20.28 Aligned_cols=78 Identities=10% Similarity=0.063 Sum_probs=41.4
Q ss_pred cceEE---EEecCCCccccc-------eeEeeccCCCCCCCCcEEeEEEcCCcccccCCCC--CcccceeEEEe----cC
Q psy3418 12 IPTYI---LVRSKNASVPAS-------CKIVIEASPLTPHVVATLPPILCTIPYFTNDKTK--KFDSGRNVISI----LP 75 (119)
Q Consensus 12 ~~~~~---~~~~~~~~~~~~-------~k~~~~~~~~~ka~vPIVPVvI~gt~~i~p~k~~--~~~PG~V~V~I----lp 75 (119)
-|.|| +.|+.|-+||-+ ++-+++| +.+.|++. .+... +.+|...+ ++.+|+|+|.+ +.
T Consensus 19 yP~Y~Ds~~tr~eGRRV~k~~aVenPt~~EI~~a--~~~Lgl~~---~vE~~-K~yPr~w~~~~~~~GRVrV~lk~~dG~ 92 (128)
T 1jid_A 19 YPAYLNNKKTIAEGRRIPISKAVENPTATEIQDV--CSAVGLNV---FLEKN-KMYSREWNRDVQYRGRVRVQLKQEDGS 92 (128)
T ss_dssp CGGGGBTTSCTTTTCCSCTTTCBSSCCHHHHHHH--HHHTTCCE---EEETT-CCCTTCCCCCGGGCCEEEECCBCTTSC
T ss_pred CcccccCCCChhhcCccCHHHhccCCCHHHHHHH--HHHcCCCe---EEecC-CCCCccchhhcCCCCEEEEEEeCCCCC
Confidence 45565 346666566332 2333332 35677754 44433 56776432 34799999997 34
Q ss_pred cccCCCCChhhHHHHHHHHHHHH
Q psy3418 76 PIPTEGLTKDNVNDLMDRTYKAM 98 (119)
Q Consensus 76 PI~t~glt~edi~~L~e~vr~~m 98 (119)
|+.++-- ...+|+..+-+.|
T Consensus 93 ~~n~~~~---sK~~Ll~~IA~~I 112 (128)
T 1jid_A 93 LCLVQFP---SRKSVMLYAAEMI 112 (128)
T ss_dssp BSCTTCS---SHHHHHHHHHHHG
T ss_pred ccCCcCC---CHHHHHHHHHHHH
Confidence 5554322 3344666554443
No 23
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=20.31 E-value=1.4e+02 Score=19.27 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=27.7
Q ss_pred CcccCCCCChhhHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy3418 75 PPIPTEGLTKDNVNDLMDRTYKAMSEEYEKITKENTPP 112 (119)
Q Consensus 75 pPI~t~glt~edi~~L~e~vr~~m~~~L~~l~~~~~~~ 112 (119)
+.++++..+.+.++++.+.+.+.+.........+....
T Consensus 141 ~~~~~Sa~~g~gi~~l~~~l~~~~~~~~~~~~~~~~~~ 178 (189)
T 4dsu_A 141 PFIETSAKTRQGVDDAFYTLVREIRKHKEKMSKDGKKK 178 (189)
T ss_dssp CEEECCTTTCTTHHHHHHHHHHHHHHHHHHHHHCSSTT
T ss_pred eEEEEeCCCCCCHHHHHHHHHHHHHHhhhhcccccccc
Confidence 45667777778899999988888887777666554433
No 24
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=20.24 E-value=1.5e+02 Score=24.13 Aligned_cols=33 Identities=21% Similarity=0.566 Sum_probs=26.1
Q ss_pred EEEecCcccCCCCChhhHHHHHHHHHHHHHHHHHhh
Q psy3418 70 VISILPPIPTEGLTKDNVNDLMDRTYKAMSEEYEKI 105 (119)
Q Consensus 70 ~V~IlpPI~t~glt~edi~~L~e~vr~~m~~~L~~l 105 (119)
.|++.||.- .+.++++++.+.+.+.+.+.+.++
T Consensus 440 ~i~l~PPL~---it~~eid~~~~~l~~al~~v~ael 472 (473)
T 4e3q_A 440 SVVLCPPFI---LTEAQMDEMFDKLEKALDKVFAEV 472 (473)
T ss_dssp EEEECCCTT---CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCC---CCHHHHHHHHHHHHHHHHHHHHHh
Confidence 477999974 367899999998888888877664
Done!