Query psy3426
Match_columns 360
No_of_seqs 335 out of 2955
Neff 9.5
Searched_HMMs 29240
Date Sat Aug 17 00:45:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3426.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3426hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qq8_A TBC1 domain family memb 100.0 2.5E-42 8.5E-47 318.2 18.2 199 2-204 112-312 (334)
2 4hl4_A TBC1 domain family memb 100.0 2.9E-42 1E-46 312.2 16.7 200 2-207 85-292 (292)
3 1fkm_A Protein (GYP1P), ORF YO 100.0 1.7E-41 5.8E-46 318.7 18.8 204 2-209 89-387 (396)
4 2qfz_A TBC1 domain family memb 100.0 5.5E-41 1.9E-45 311.2 19.7 201 2-207 107-339 (345)
5 3hzj_A Rabgap1L, RAB GTPase-ac 100.0 4.9E-41 1.7E-45 307.0 16.0 196 2-201 72-275 (310)
6 3qye_A TBC1 domain family memb 100.0 3.2E-40 1.1E-44 304.5 19.6 195 2-201 106-308 (331)
7 3qwl_A TBC1 domain family memb 100.0 8.1E-29 2.8E-33 221.9 16.5 155 44-204 131-286 (294)
8 3iwh_A Rhodanese-like domain p 99.9 4.9E-25 1.7E-29 167.0 7.6 102 237-358 2-103 (103)
9 3eme_A Rhodanese-like domain p 99.9 6.4E-24 2.2E-28 161.6 8.4 101 237-357 2-102 (103)
10 3foj_A Uncharacterized protein 99.9 6.2E-24 2.1E-28 160.7 7.9 99 237-355 2-100 (100)
11 3gk5_A Uncharacterized rhodane 99.9 2E-23 6.9E-28 160.1 5.1 101 236-359 3-103 (108)
12 1qxn_A SUD, sulfide dehydrogen 99.9 1.9E-22 6.5E-27 161.4 6.9 106 234-357 20-129 (137)
13 1gmx_A GLPE protein; transfera 99.9 8.6E-23 2.9E-27 156.7 4.5 101 236-357 4-104 (108)
14 2hhg_A Hypothetical protein RP 99.9 2.3E-22 7.8E-27 161.7 7.2 116 234-359 19-135 (139)
15 3hix_A ALR3790 protein; rhodan 99.9 6.7E-23 2.3E-27 156.7 3.7 99 243-359 2-101 (106)
16 3ilm_A ALR3790 protein; rhodan 99.9 1.3E-22 4.4E-27 163.1 5.2 102 238-358 1-104 (141)
17 3d1p_A Putative thiosulfate su 99.9 5.7E-22 2E-26 159.3 8.2 115 234-357 20-138 (139)
18 1tq1_A AT5G66040, senescence-a 99.9 3.5E-22 1.2E-26 158.3 6.1 114 232-356 13-128 (129)
19 1wv9_A Rhodanese homolog TT165 99.9 1.5E-22 5.2E-27 151.2 3.7 93 237-352 2-94 (94)
20 3nhv_A BH2092 protein; alpha-b 99.8 9.9E-22 3.4E-26 158.5 6.7 106 236-359 15-122 (144)
21 3flh_A Uncharacterized protein 99.8 3.9E-22 1.3E-26 156.9 4.0 110 231-359 9-121 (124)
22 2k0z_A Uncharacterized protein 99.8 1.2E-21 4.2E-26 150.6 6.5 91 254-359 14-104 (110)
23 1t3k_A Arath CDC25, dual-speci 99.8 3.4E-21 1.2E-25 156.8 6.2 108 234-359 25-143 (152)
24 2fsx_A RV0390, COG0607: rhodan 99.8 2.6E-20 8.8E-25 151.2 6.9 111 236-358 4-140 (148)
25 2jtq_A Phage shock protein E; 99.8 3.9E-20 1.3E-24 135.4 4.9 80 256-350 1-80 (85)
26 3i2v_A Adenylyltransferase and 99.8 1.5E-20 5E-25 148.6 2.7 108 238-354 2-122 (127)
27 1vee_A Proline-rich protein fa 99.8 3.5E-19 1.2E-23 141.9 9.3 108 236-358 4-125 (134)
28 1e0c_A Rhodanese, sulfurtransf 99.8 2.7E-19 9.1E-24 160.1 8.3 120 236-359 8-131 (271)
29 3hzu_A Thiosulfate sulfurtrans 99.8 3.7E-19 1.3E-23 162.5 7.3 115 237-358 40-160 (318)
30 1c25_A CDC25A; hydrolase, cell 99.8 2.3E-19 7.9E-24 147.7 5.3 113 235-358 21-148 (161)
31 3g5j_A Putative ATP/GTP bindin 99.8 2E-19 6.8E-24 143.4 4.3 107 236-353 4-132 (134)
32 1urh_A 3-mercaptopyruvate sulf 99.8 8.5E-19 2.9E-23 157.6 8.8 118 237-359 4-136 (280)
33 2j6p_A SB(V)-AS(V) reductase; 99.8 1.1E-18 3.6E-23 142.1 8.4 111 236-356 4-121 (152)
34 4f67_A UPF0176 protein LPG2838 99.8 8.5E-19 2.9E-23 154.2 8.0 106 234-353 119-224 (265)
35 1e0c_A Rhodanese, sulfurtransf 99.8 8.6E-19 2.9E-23 156.8 8.0 112 237-357 147-271 (271)
36 3aay_A Putative thiosulfate su 99.8 9.5E-19 3.2E-23 157.0 7.3 116 237-358 6-126 (277)
37 2ouc_A Dual specificity protei 99.7 8.5E-19 2.9E-23 141.1 6.2 117 238-356 2-137 (142)
38 2a2k_A M-phase inducer phospha 99.7 9.6E-19 3.3E-23 146.0 6.6 111 235-355 22-147 (175)
39 1qb0_A Protein (M-phase induce 99.7 8E-19 2.7E-23 150.7 6.1 109 234-356 41-168 (211)
40 2vsw_A Dual specificity protei 99.7 7.8E-19 2.7E-23 143.3 4.0 116 236-355 3-131 (153)
41 3op3_A M-phase inducer phospha 99.7 1.6E-18 5.6E-23 148.3 6.1 104 234-352 54-177 (216)
42 3olh_A MST, 3-mercaptopyruvate 99.7 4.5E-18 1.5E-22 154.2 9.0 122 237-358 22-158 (302)
43 1rhs_A Sulfur-substituted rhod 99.7 4E-18 1.4E-22 154.3 7.9 122 237-358 8-143 (296)
44 1uar_A Rhodanese; sulfurtransf 99.7 1.3E-18 4.4E-23 156.8 3.9 116 237-358 8-128 (285)
45 1urh_A 3-mercaptopyruvate sulf 99.7 5.8E-18 2E-22 152.2 7.4 111 237-357 152-278 (280)
46 3f4a_A Uncharacterized protein 99.7 2.2E-18 7.4E-23 142.5 3.7 121 229-357 23-158 (169)
47 1rhs_A Sulfur-substituted rhod 99.7 4.9E-18 1.7E-22 153.8 6.0 113 237-358 160-289 (296)
48 3tg1_B Dual specificity protei 99.7 8.3E-18 2.8E-22 137.8 6.5 119 235-354 9-145 (158)
49 1yt8_A Thiosulfate sulfurtrans 99.7 5.3E-18 1.8E-22 165.8 6.2 106 236-358 6-111 (539)
50 3aay_A Putative thiosulfate su 99.7 1.5E-17 5.2E-22 149.2 8.0 111 238-359 145-277 (277)
51 1uar_A Rhodanese; sulfurtransf 99.7 2.1E-17 7.1E-22 148.9 8.8 117 237-359 146-284 (285)
52 3olh_A MST, 3-mercaptopyruvate 99.7 2.8E-18 9.6E-23 155.6 2.4 110 237-355 175-299 (302)
53 3tp9_A Beta-lactamase and rhod 99.7 1.4E-17 4.8E-22 160.7 5.6 103 235-357 372-474 (474)
54 1okg_A Possible 3-mercaptopyru 99.7 1.3E-17 4.4E-22 155.2 4.8 114 236-358 13-144 (373)
55 3hzu_A Thiosulfate sulfurtrans 99.7 3.5E-17 1.2E-21 149.4 7.3 112 237-359 179-310 (318)
56 1hzm_A Dual specificity protei 99.7 1E-17 3.5E-22 136.8 2.8 114 234-351 13-142 (154)
57 2eg4_A Probable thiosulfate su 99.7 3.3E-17 1.1E-21 142.8 6.2 99 237-356 121-229 (230)
58 1yt8_A Thiosulfate sulfurtrans 99.7 5.1E-17 1.7E-21 158.8 7.8 102 236-358 376-478 (539)
59 2wlr_A Putative thiosulfate su 99.6 1.5E-16 5.2E-21 151.0 7.2 118 237-358 124-251 (423)
60 2wlr_A Putative thiosulfate su 99.6 1.4E-16 4.6E-21 151.4 6.5 118 237-359 272-408 (423)
61 1whb_A KIAA0055; deubiqutinati 99.6 7.8E-16 2.7E-20 125.8 8.7 115 235-355 13-144 (157)
62 2gwf_A Ubiquitin carboxyl-term 99.6 8.1E-16 2.8E-20 125.6 5.4 114 234-354 17-148 (157)
63 3ntd_A FAD-dependent pyridine 99.6 8.4E-16 2.9E-20 151.5 5.4 95 235-352 471-565 (565)
64 3utn_X Thiosulfate sulfurtrans 99.6 6.2E-15 2.1E-19 133.9 10.5 123 234-358 25-161 (327)
65 3ics_A Coenzyme A-disulfide re 99.6 9.2E-16 3.2E-20 151.9 4.6 100 231-352 483-582 (588)
66 3tp9_A Beta-lactamase and rhod 99.6 3.1E-15 1.1E-19 144.2 7.4 107 232-359 268-374 (474)
67 2eg4_A Probable thiosulfate su 99.5 7E-15 2.4E-19 128.1 6.9 92 253-355 3-101 (230)
68 3r2u_A Metallo-beta-lactamase 99.5 1.3E-15 4.5E-20 146.3 0.0 82 253-350 384-465 (466)
69 1okg_A Possible 3-mercaptopyru 99.5 3E-15 1E-19 139.3 0.3 97 255-356 173-293 (373)
70 3utn_X Thiosulfate sulfurtrans 99.4 6.6E-14 2.2E-18 127.1 5.3 111 238-353 185-318 (327)
71 3r2u_A Metallo-beta-lactamase 99.0 1.2E-10 4E-15 111.8 5.1 79 254-348 294-374 (466)
72 2f46_A Hypothetical protein; s 96.9 0.0014 4.8E-08 52.5 5.6 87 238-336 29-129 (156)
73 1v8c_A MOAD related protein; r 89.9 0.057 1.9E-06 43.5 -0.1 25 257-285 122-146 (168)
74 4erc_A Dual specificity protei 84.6 3.7 0.00013 31.5 7.8 87 240-336 24-117 (150)
75 2img_A Dual specificity protei 79.3 6.3 0.00021 30.2 7.2 75 256-336 37-118 (151)
76 2nt2_A Protein phosphatase sli 71.0 11 0.00038 28.7 6.6 29 308-336 80-110 (145)
77 2hcm_A Dual specificity protei 70.1 8.5 0.00029 30.1 5.9 29 308-336 88-118 (164)
78 1wrm_A Dual specificity phosph 67.5 12 0.00042 29.2 6.3 29 308-336 82-112 (165)
79 2e0t_A Dual specificity phosph 66.4 10 0.00036 29.0 5.6 29 308-336 84-114 (151)
80 3f81_A Dual specificity protei 66.1 13 0.00045 29.5 6.3 28 309-336 115-144 (183)
81 1xri_A AT1G05000; structural g 62.9 13 0.00044 28.5 5.5 29 308-336 91-120 (151)
82 1yz4_A DUSP15, dual specificit 60.2 17 0.00057 28.2 5.8 29 308-336 83-113 (160)
83 3ezz_A Dual specificity protei 60.2 26 0.00087 26.5 6.8 29 308-336 80-110 (144)
84 2esb_A Dual specificity protei 59.5 20 0.00069 28.8 6.3 29 308-336 96-126 (188)
85 2wgp_A Dual specificity protei 56.3 23 0.00078 28.5 6.1 29 308-336 102-132 (190)
86 3v0d_A Voltage-sensor containi 53.8 32 0.0011 30.7 7.0 91 238-335 49-146 (339)
87 2pq5_A Dual specificity protei 53.5 28 0.00095 28.4 6.2 29 308-336 130-160 (205)
88 3s4e_A Dual specificity protei 53.2 30 0.001 26.1 6.1 29 308-336 80-110 (144)
89 3rof_A Low molecular weight pr 52.6 17 0.00059 28.5 4.6 40 310-349 7-50 (158)
90 3rz2_A Protein tyrosine phosph 52.5 54 0.0018 26.1 7.8 30 307-336 115-145 (189)
91 2c5s_A THII, probable thiamine 51.1 17 0.00057 33.5 4.9 113 188-336 93-213 (413)
92 2hjv_A ATP-dependent RNA helic 49.7 21 0.00071 27.7 4.7 41 304-346 30-70 (163)
93 2g6z_A Dual specificity protei 48.9 39 0.0013 27.8 6.4 29 308-336 82-112 (211)
94 1ywf_A Phosphotyrosine protein 48.0 27 0.00091 30.5 5.5 35 231-269 48-82 (296)
95 2rb4_A ATP-dependent RNA helic 47.4 25 0.00084 27.6 4.8 37 308-346 33-69 (175)
96 2cwd_A Low molecular weight ph 47.2 14 0.00048 29.1 3.2 42 309-350 4-50 (161)
97 1t5i_A C_terminal domain of A 47.2 27 0.00091 27.4 5.0 41 304-346 26-66 (172)
98 1u2p_A Ptpase, low molecular w 47.0 22 0.00076 27.9 4.4 40 310-349 5-49 (163)
99 1fuk_A Eukaryotic initiation f 44.8 30 0.001 26.7 5.0 41 304-346 25-65 (165)
100 2q05_A Late protein H1, dual s 44.2 43 0.0015 26.9 5.9 29 308-336 124-154 (195)
101 2gi4_A Possible phosphotyrosin 44.0 25 0.00086 27.4 4.3 39 311-349 3-46 (156)
102 4etn_A LMPTP, low molecular we 43.3 13 0.00046 30.0 2.6 40 309-349 34-77 (184)
103 1jl3_A Arsenate reductase; alp 43.0 25 0.00085 26.7 4.0 38 310-347 4-41 (139)
104 1vbk_A Hypothetical protein PH 42.1 28 0.00097 30.5 4.8 114 188-336 82-204 (307)
105 2jgn_A DBX, DDX3, ATP-dependen 41.2 27 0.00094 27.8 4.2 37 308-346 45-81 (185)
106 3n8i_A Low molecular weight ph 41.2 28 0.00095 27.2 4.1 41 309-349 5-50 (157)
107 1d1q_A Tyrosine phosphatase (E 40.6 17 0.00057 28.6 2.7 40 310-349 8-53 (161)
108 3n0a_A Tyrosine-protein phosph 40.1 93 0.0032 28.0 7.9 88 240-335 48-142 (361)
109 1fpz_A Cyclin-dependent kinase 40.0 44 0.0015 27.2 5.4 25 308-332 132-157 (212)
110 3rgo_A Protein-tyrosine phosph 39.0 30 0.001 26.4 4.0 29 308-336 88-118 (157)
111 1zzw_A Dual specificity protei 38.9 33 0.0011 26.0 4.2 29 308-336 82-112 (149)
112 1p8a_A Protein tyrosine phosph 38.6 7.2 0.00025 30.2 0.2 40 310-349 5-44 (146)
113 1jzt_A Hypothetical 27.5 kDa p 38.2 38 0.0013 28.6 4.8 31 310-341 59-91 (246)
114 1jf8_A Arsenate reductase; ptp 38.0 39 0.0013 25.4 4.4 38 310-347 4-41 (131)
115 3jvi_A Protein tyrosine phosph 37.5 24 0.00081 27.7 3.2 40 310-349 5-49 (161)
116 3rh0_A Arsenate reductase; oxi 36.9 35 0.0012 26.3 4.0 38 310-347 21-58 (148)
117 3cm3_A Late protein H1, dual s 36.9 47 0.0016 26.1 5.0 28 309-336 108-137 (176)
118 3d3k_A Enhancer of mRNA-decapp 36.1 38 0.0013 28.9 4.5 31 310-341 86-118 (259)
119 3eaq_A Heat resistant RNA depe 36.0 41 0.0014 27.4 4.6 41 304-346 26-66 (212)
120 2l17_A Synarsc, arsenate reduc 35.4 45 0.0015 25.1 4.4 36 311-346 6-41 (134)
121 3d3j_A Enhancer of mRNA-decapp 35.2 39 0.0013 29.7 4.5 31 310-341 133-165 (306)
122 1ohe_A CDC14B, CDC14B2 phospha 34.9 58 0.002 29.1 5.7 30 307-336 267-298 (348)
123 2r0b_A Serine/threonine/tyrosi 34.7 35 0.0012 26.0 3.7 29 308-336 89-119 (154)
124 4h3k_B RNA polymerase II subun 34.7 48 0.0017 27.1 4.5 33 311-344 27-59 (214)
125 2o8n_A APOA-I binding protein; 33.6 43 0.0015 28.7 4.4 31 310-341 80-112 (265)
126 2hxp_A Dual specificity protei 32.0 46 0.0016 25.5 4.0 29 308-336 84-114 (155)
127 3to5_A CHEY homolog; alpha(5)b 31.5 47 0.0016 24.9 3.9 40 309-349 12-51 (134)
128 2i6j_A Ssoptp, sulfolobus solf 31.0 65 0.0022 24.5 4.8 13 313-325 93-105 (161)
129 1zud_1 Adenylyltransferase THI 30.9 72 0.0025 26.8 5.4 40 307-348 26-65 (251)
130 2p6n_A ATP-dependent RNA helic 29.1 69 0.0024 25.5 4.8 36 309-346 54-89 (191)
131 2oud_A Dual specificity protei 29.0 51 0.0018 25.9 3.9 29 308-336 86-116 (177)
132 1rxd_A Protein tyrosine phosph 28.9 79 0.0027 23.8 5.0 30 307-336 94-124 (159)
133 3czc_A RMPB; alpha/beta sandwi 27.6 45 0.0015 24.1 3.0 28 309-336 18-49 (110)
134 4fak_A Ribosomal RNA large sub 27.1 49 0.0017 26.0 3.3 42 308-349 73-118 (163)
135 3fbt_A Chorismate mutase and s 27.1 76 0.0026 27.4 4.9 33 308-342 121-153 (282)
136 3tum_A Shikimate dehydrogenase 26.8 65 0.0022 27.6 4.4 33 308-342 124-156 (269)
137 1vkr_A Mannitol-specific PTS s 26.8 51 0.0017 24.6 3.2 27 309-335 13-43 (125)
138 3emu_A Leucine rich repeat and 26.6 67 0.0023 24.8 4.2 29 308-336 86-116 (161)
139 2wmy_A WZB, putative acid phos 26.3 80 0.0027 24.2 4.5 37 310-347 9-45 (150)
140 4ea9_A Perosamine N-acetyltran 26.3 72 0.0024 26.0 4.5 44 309-354 12-55 (220)
141 1tvm_A PTS system, galactitol- 26.0 52 0.0018 23.9 3.1 27 310-336 22-52 (113)
142 3rui_A Ubiquitin-like modifier 25.2 69 0.0024 28.5 4.3 40 307-348 32-71 (340)
143 1puz_A Conserved hypothetical 24.7 1.5E+02 0.0052 20.1 5.1 28 93-120 42-69 (82)
144 1npy_A Hypothetical shikimate 24.6 90 0.0031 26.7 4.9 33 308-342 118-150 (271)
145 2y96_A Dual specificity phosph 23.3 74 0.0025 26.1 4.0 29 308-336 138-168 (219)
146 2wja_A Putative acid phosphata 23.2 93 0.0032 24.4 4.4 37 310-347 27-63 (168)
147 3gxh_A Putative phosphatase (D 23.0 1.3E+02 0.0044 23.0 5.2 89 237-336 26-124 (157)
148 1ns5_A Hypothetical protein YB 22.9 74 0.0025 24.8 3.6 40 309-349 66-109 (155)
149 3t4e_A Quinate/shikimate dehyd 22.8 78 0.0027 27.8 4.2 33 308-342 147-179 (312)
150 1oyw_A RECQ helicase, ATP-depe 22.8 94 0.0032 29.4 5.1 41 304-346 231-271 (523)
151 1to0_A Hypothetical UPF0247 pr 22.7 60 0.0021 25.6 3.1 41 309-349 70-114 (167)
152 1y1l_A Arsenate reductase (ARS 22.6 56 0.0019 24.1 2.8 36 311-347 1-36 (124)
153 2fek_A Low molecular weight pr 22.5 1.1E+02 0.0037 24.0 4.6 37 310-347 23-59 (167)
154 2j16_A SDP-1, tyrosine-protein 22.3 80 0.0027 25.1 3.9 29 308-336 116-146 (182)
155 3jyo_A Quinate/shikimate dehyd 22.3 88 0.003 26.9 4.4 33 308-342 126-158 (283)
156 3s4o_A Protein tyrosine phosph 22.2 95 0.0032 23.6 4.3 28 309-336 109-138 (167)
157 3pwz_A Shikimate dehydrogenase 21.9 90 0.0031 26.7 4.3 33 308-342 119-151 (272)
158 1xti_A Probable ATP-dependent 21.2 1.2E+02 0.0042 26.6 5.4 41 304-346 245-285 (391)
159 3tnl_A Shikimate dehydrogenase 21.1 87 0.003 27.5 4.1 33 308-342 153-185 (315)
160 3nbm_A PTS system, lactose-spe 20.7 84 0.0029 22.7 3.3 30 309-340 6-39 (108)
161 4etm_A LMPTP, low molecular we 20.6 1.2E+02 0.004 24.0 4.5 39 311-349 20-63 (173)
162 3h8v_A Ubiquitin-like modifier 20.5 88 0.003 27.2 4.0 40 307-348 34-73 (292)
163 3i32_A Heat resistant RNA depe 20.3 1E+02 0.0036 26.7 4.5 39 306-346 25-63 (300)
164 1s2m_A Putative ATP-dependent 20.2 1.3E+02 0.0043 26.8 5.2 40 305-346 254-293 (400)
165 3h5n_A MCCB protein; ubiquitin 20.1 84 0.0029 28.1 3.9 41 306-348 115-155 (353)
No 1
>2qq8_A TBC1 domain family member 14; structural genomics consortium, RAB-GAP, SGC, GTPase activation, hydrolase activator; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-42 Score=318.16 Aligned_cols=199 Identities=22% Similarity=0.385 Sum_probs=184.4
Q ss_pred ceeccCCccCCCCcccCCh-hhHHHHHHHHHHHHHHcCCCCCcccCChhHHHHHHHHHhcCChhHHHHHHHHHHHhhhhc
Q psy3426 2 FCYFGFNLCHQYNELLSSK-TGHTKLKRVLKAWVTSHPQFDFVYWQGLDSLCAPFVFLNFNDEATAYACFSTFIPKYLHN 80 (360)
Q Consensus 2 ~I~~Dv~Rt~~~~~~f~~~-~~~~~L~~iL~~~~~~~p~~~i~Y~QGm~~i~~~ll~~~~~~e~~~f~~~~~l~~~~~~~ 80 (360)
+|++||+||+|.+++|+.. .+++.|+|||.+|+.+||+ +|||||||+||++|++.. +|++|||||+++|+++.+.
T Consensus 112 ~I~~Dv~RT~p~~~~F~~~~~~~~~L~rIL~aya~~~p~--vgY~QGm~~iaa~lLl~~--~E~~aF~~~~~l~~~~~~~ 187 (334)
T 2qq8_A 112 LIKLDISRTFPNLCIFQQGGPYHDMLHSILGAYTCYRPD--VGYVQGMSFIAAVLILNL--DTADAFIAFSNLLNKPCQM 187 (334)
T ss_dssp HHHHHHHTSSGGGCSSSTTSTTHHHHHHHHHHHHHHCTT--TCCCTTHHHHHHHHHHHS--CHHHHHHHHHHHHTSHHHH
T ss_pred HHHHHHhhcCCCchhhcCCCchHHHHHHHHHHHHHhCCC--CCcchhHHHHHHHHHhcC--CHHHHHHHHHHHHHhhhHH
Confidence 6899999999999999864 6789999999999999999 999999999999998764 8999999999999886554
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHcHHHHHHHHhcCCCCccchHHHHHHHhcccCCHHHHHHHHHHHhhCCCchHHHHHH
Q psy3426 81 FFLRDNSAVVREYLSKFSHLIAFHDAELANHMSEINFIPELFAIPWFLTMFSHVLPLHKIFHLWDKLLLGDASFPLFIGV 160 (360)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~lL~~~dp~L~~hL~~~~~~~~~~~~~W~~~lF~~~l~~~~~~~iwD~~l~~~~~~~~~v~~ 160 (360)
.++..+.+++...+..++.+|+.++|+||+||.+.++.+..|+++||+|+|++++|++.++||||.++++|..+++++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~ll~~~~P~L~~hL~~~~i~~~~~~~~W~ltlF~~~lp~~~~lriWD~~l~eg~~~l~~val 267 (334)
T 2qq8_A 188 AFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCRDGEEFLFRTAL 267 (334)
T ss_dssp HHHSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHHTTTTTTSCHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred hccCCChHHHHHHHHHHHHHHHHHCHHHHHHHHHcCCCccchHHHHHHHHhcccCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 44445678889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHhcCCHHHHHHHhcCCCC-CCHHHHHHHHHHhHhhC
Q psy3426 161 SILKQLRETLLSSGFNECILLFSDLPE-VDIEQSVTDSIDIYCVT 204 (360)
Q Consensus 161 ail~~~~~~ll~~~~~~~l~~l~~~~~-~d~~~li~~A~~l~~~~ 204 (360)
|+|...+++|+++|+++++.+++++|. +|++.+++.|..+.-++
T Consensus 268 aiL~~~~~~Ll~~d~~~il~~L~~lp~~~d~~~l~~~a~~l~~~~ 312 (334)
T 2qq8_A 268 GILKLFEDILTKMDFIHMAQFLTRLPEDLPAEELFASIATIQMQS 312 (334)
T ss_dssp HHHHHTHHHHHTCCHHHHHHHHHSCCTTCCHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhCCCcCCHHHHHHHHHHccCcH
Confidence 999999999999999999999999985 89999999999987443
No 2
>4hl4_A TBC1 domain family member 20; rabgap, RAB1B, hydrolase activator, catalytic domain, F GTPase-activating proteins, RAB GTP-binding protein, GTP HY; 2.20A {Homo sapiens} PDB: 4hlq_A*
Probab=100.00 E-value=2.9e-42 Score=312.22 Aligned_cols=200 Identities=19% Similarity=0.341 Sum_probs=182.2
Q ss_pred ceeccCCccCCCCcccCC----hhhHHHHHHHHHHHHHHcCCCCCcccCChhHHHHHHHHHhcCChhHHHHHHHHHHHhh
Q psy3426 2 FCYFGFNLCHQYNELLSS----KTGHTKLKRVLKAWVTSHPQFDFVYWQGLDSLCAPFVFLNFNDEATAYACFSTFIPKY 77 (360)
Q Consensus 2 ~I~~Dv~Rt~~~~~~f~~----~~~~~~L~~iL~~~~~~~p~~~i~Y~QGm~~i~~~ll~~~~~~e~~~f~~~~~l~~~~ 77 (360)
+|++||+||+|.++.|.+ ..+++.|+|||.+|+.+||+ +|||||||+||++|+++. +|++|||||+++++++
T Consensus 85 qI~~Dv~RT~~~~~~~~~~~~~~~~~~~L~~iL~ay~~~~p~--vgY~QGm~~iaa~lLl~~--~e~~aF~~l~~l~~~~ 160 (292)
T 4hl4_A 85 QVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQ--LHYYQGYHDIVVTFLLVV--GERLATSLVEKLSTHH 160 (292)
T ss_dssp HHHHHHHTTGGGSCTTSCHHHHHHHHHHHHHHHHHHHHHCTT--CCCCTTHHHHHHHHHHHH--CHHHHHHHHHHHHHTT
T ss_pred HHHHhhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHCCC--CCeeccHHHHHHHHHHHc--CHHHHHHHHHHHHHHH
Confidence 689999999999998864 34567899999999999999 999999999999999776 7999999999999987
Q ss_pred hhccCCCCChHHHHHHHHHHHHHHHHHcHHHHHHHHhcCCCCccchHHHHHHHhcccCC-HHHHHHHHHHHhhCCCchHH
Q psy3426 78 LHNFFLRDNSAVVREYLSKFSHLIAFHDAELANHMSEINFIPELFAIPWFLTMFSHVLP-LHKIFHLWDKLLLGDASFPL 156 (360)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~lL~~~dp~L~~hL~~~~~~~~~~~~~W~~~lF~~~l~-~~~~~~iwD~~l~~~~~~~~ 156 (360)
+++++.+ +..++...+..++.+|+.++|+||+||.+.++ ..+|+++||+|+|++++| ++.++||||.++++|+.+++
T Consensus 161 l~~~~~~-~~~~~~~~~~~l~~ll~~~~P~L~~hL~~~~i-~~~~~~~W~ltlF~~~l~~~~~~~rlWD~~l~~g~~~~~ 238 (292)
T 4hl4_A 161 LRDFMDP-TMDNTKHILNYLMPIIDQVNPELHDFMQSAEV-GTIFALSWLITWFGHVLSDFRHVVRLYDFFLACHPLMPI 238 (292)
T ss_dssp TTGGGCS-SSCTTTGGGGGHHHHHHHHCHHHHHHHC-CCC-CSGGGHHHHHTTTTTTSCCHHHHHHHHHHHHHSCTTHHH
T ss_pred HHHhccc-chHHHHHHHHHHHHHHHHHCHHHHHHHHHcCC-CcchHHHHHHHHHhhhcCcHHHHHHHHHHHHHcCCcHHH
Confidence 8776654 56677888899999999999999999999999 469999999999999996 99999999999999999999
Q ss_pred HHHHHHHHHhHHHHhcC--CHHHHHHHhcCCC-CCCHHHHHHHHHHhHhhCCCc
Q psy3426 157 FIGVSILKQLRETLLSS--GFNECILLFSDLP-EVDIEQSVTDSIDIYCVTPRS 207 (360)
Q Consensus 157 ~v~~ail~~~~~~ll~~--~~~~~l~~l~~~~-~~d~~~li~~A~~l~~~~P~s 207 (360)
++++|++...|++|++. ++++++.+++++| .+|++.+++.|..++++.|+|
T Consensus 239 ~v~~ail~~~~~~Ll~~~~d~~~l~~~l~~lp~~~d~~~li~~A~~l~~~~pp~ 292 (292)
T 4hl4_A 239 YFAAVIVLYREQEVLDCDCDMASVHHLLSQIPQDLPYETLISRAGDLFVQFPPS 292 (292)
T ss_dssp HHHHHHHHHTHHHHHTSCCSTTHHHHHHHSCCSSCCHHHHHHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHCCCC
Confidence 99999999999999995 7888888999999 799999999999999999986
No 3
>1fkm_A Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein, vesicular trafficking, endocytosis, hydrolase, GTPase activation; 1.90A {Saccharomyces cerevisiae} SCOP: a.69.2.1 a.69.2.1 PDB: 2g77_A*
Probab=100.00 E-value=1.7e-41 Score=318.73 Aligned_cols=204 Identities=20% Similarity=0.385 Sum_probs=183.8
Q ss_pred ceeccCCccCCCCcccCChhhHHHHHHHHHHHHHHcCCCCCcccCChhHHHHHHHHHhcC-----------------C--
Q psy3426 2 FCYFGFNLCHQYNELLSSKTGHTKLKRVLKAWVTSHPQFDFVYWQGLDSLCAPFVFLNFN-----------------D-- 62 (360)
Q Consensus 2 ~I~~Dv~Rt~~~~~~f~~~~~~~~L~~iL~~~~~~~p~~~i~Y~QGm~~i~~~ll~~~~~-----------------~-- 62 (360)
+|++||+||+|.+++|+++.+++.|+|||.+|+.+||+ +|||||||+|+++|++++.. +
T Consensus 89 qI~~Dv~RT~p~~~~F~~~~~~~~L~rIL~aya~~np~--iGY~QGmn~i~a~ll~v~~~~~~~~~~~~~~~~~~~~~~l 166 (396)
T 1fkm_A 89 QIEIDIPRTNPHIPLYQFKSVQNSLQRILYLWAIRHPA--SGYVQGINDLVTPFFETFLTEYLPPSQIDDVEIKDPSTYM 166 (396)
T ss_dssp HHHHHGGGSSTTSGGGGSHHHHHHHHHHHHHHHHHCTT--TCSCTTHHHHHHHHHHHHHGGGSCGGGGGGTTTSCGGGTC
T ss_pred HHHHHhhhhCCCcccccCchHHHHHHHHHHHHHHHCCC--CCcccCcHHHHHHHHHHHHHhhccccccccccccchhhcc
Confidence 58999999999999999999999999999999999999 99999999999999987521 1
Q ss_pred --------hhHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHHHHHHcHHHHHHHHhcCCCCccchHHHHHHHhccc
Q psy3426 63 --------EATAYACFSTFIPKYLHNFFLRDNSAVVREYLSKFSHLIAFHDAELANHMSEINFIPELFAIPWFLTMFSHV 134 (360)
Q Consensus 63 --------e~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~dp~L~~hL~~~~~~~~~~~~~W~~~lF~~~ 134 (360)
|++|||||+++|+++ ..+|.. +.+++...+..++.+|+.+||+||+||.+.++.+..|+++||++||+++
T Consensus 167 ~~~~~~~~E~daF~~f~~lm~~~-~~~f~~-~~~~i~~~~~~l~~LL~~~dP~L~~hL~~~~i~~~~f~~rW~l~LF~~~ 244 (396)
T 1fkm_A 167 VDEQITDLEADTFWCLTKLLEQI-TDNYIH-GQPGILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCLLMRE 244 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHHGGG-GGGSST-TCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCTHHHHHHHHHTTTGGG
T ss_pred chhhhhhhHHHHHHHHHHHHHHH-HHHHhh-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh
Confidence 899999999999984 555544 5789999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhCC---------------------------------------------------C-----------
Q psy3426 135 LPLHKIFHLWDKLLLGD---------------------------------------------------A----------- 152 (360)
Q Consensus 135 l~~~~~~~iwD~~l~~~---------------------------------------------------~----------- 152 (360)
+|++.++||||.+|++| .
T Consensus 245 ~p~~~vlrlWD~~l~eg~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (396)
T 1fkm_A 245 FQMGTVIRMWDTYLSETSQEVTSSYSMSSNDIKPPVTPTEPRVASFVTPTKDFQSPTTALSNMTPNNAVEDSGKMRQSSL 324 (396)
T ss_dssp SCHHHHHHHHHHHHHHHC------------------------------------------------------------CH
T ss_pred CCHHHHHHHHHHHHHCCCccccchhhhhcccccCCccccccccccccccccccccccccccccccccccccchhccccch
Confidence 99999999999999977 2
Q ss_pred -chHHHHHHHHHHHhHHHHhcCCHHHHHHHhcCCCC-----CCHHHHHHHHHHhHhhCCCccc
Q psy3426 153 -SFPLFIGVSILKQLRETLLSSGFNECILLFSDLPE-----VDIEQSVTDSIDIYCVTPRSIT 209 (360)
Q Consensus 153 -~~~~~v~~ail~~~~~~ll~~~~~~~l~~l~~~~~-----~d~~~li~~A~~l~~~~P~s~~ 209 (360)
.+++++|+|+|...|++|+++|+++++.+|+++|. .|++.++..|..+...-|++..
T Consensus 325 ~~~~~~v~~AlL~~~r~~Ll~~df~~~l~~L~~~p~~~~~~~di~~ll~~A~~l~~~~~~~~~ 387 (396)
T 1fkm_A 325 NEFHVFVCAAFLIKWSDQLMEMDFQETITFLQNPPTKDWTETDIEMLLSEAFIWQSLYKDATS 387 (396)
T ss_dssp HHHHHHHHHHHHHHTHHHHTTCCHHHHHHHHTSCSCTTCCHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHhcCCCCCcccccHHHHHHHHHHHHHHHhccHH
Confidence 57889999999999999999999999999999996 3799999999988766665533
No 4
>2qfz_A TBC1 domain family member 22A; RAB-GAP, GTPase activator, structural genomics, structural genomics consortium, SGC, hydrolase activator; 2.10A {Homo sapiens} PDB: 3dzx_A
Probab=100.00 E-value=5.5e-41 Score=311.20 Aligned_cols=201 Identities=20% Similarity=0.375 Sum_probs=182.9
Q ss_pred ceeccCCccCCCCcccCChhhHHHHHHHHHHHHHHcCCCCCcccCChhHHHHHHHHHhcC--------------------
Q psy3426 2 FCYFGFNLCHQYNELLSSKTGHTKLKRVLKAWVTSHPQFDFVYWQGLDSLCAPFVFLNFN-------------------- 61 (360)
Q Consensus 2 ~I~~Dv~Rt~~~~~~f~~~~~~~~L~~iL~~~~~~~p~~~i~Y~QGm~~i~~~ll~~~~~-------------------- 61 (360)
+|++||+||+|. ++|+++.+++.|+|||.+|+.+||+ +|||||||+|+++|++++..
T Consensus 107 ~I~~Dv~RT~p~-~~F~~~~~~~~L~rIL~~ya~~~p~--vgY~QGm~~i~a~ll~v~~~~~~~~~~~~~~~~~~l~~~~ 183 (345)
T 2qfz_A 107 QIHIDIPRMSPE-ALILQPKVTEIFERILFIWAIRHPA--SGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEV 183 (345)
T ss_dssp HHHHHGGGCSCH-HHHTSHHHHHHHHHHHHHHHHHCTT--TCCCTTHHHHHHHHHHHHHGGGCC-----CCCCTTSCHHH
T ss_pred HHHHhCcccCCc-cccCCchHHHHHHHHHHHHHHHCCC--CCcccChHHHHHHHHHHHHhhhcccccccccchhhhhhhh
Confidence 589999999999 9999999999999999999999999 99999999999999987632
Q ss_pred ---ChhHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHHHHHHcHHHHHHHHhcCCCCccchHHHHHHHhcccCCHH
Q psy3426 62 ---DEATAYACFSTFIPKYLHNFFLRDNSAVVREYLSKFSHLIAFHDAELANHMSEINFIPELFAIPWFLTMFSHVLPLH 138 (360)
Q Consensus 62 ---~e~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~dp~L~~hL~~~~~~~~~~~~~W~~~lF~~~l~~~ 138 (360)
+|++|||||+++|+++ +.+|. .+.+++...+..++.+|+.++|+|++||.+.++.+..|+++||+++|++++|++
T Consensus 184 ~~~~E~daF~~f~~lm~~~-~~~y~-~~~~~i~~~~~~l~~ll~~~dP~L~~hL~~~~i~~~~f~~~W~~~lF~~~~p~~ 261 (345)
T 2qfz_A 184 LCNIEADTYWCMSKLLDGI-QDNYT-FAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNLLMREVPLR 261 (345)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGSS-TTCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCHHHHHHHHHHTTTTTTSCHH
T ss_pred hhhHHHHHHHHHHHHHHcc-ccccc-cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhHHHHHHHHHHcccCCHH
Confidence 3899999999999985 45444 357899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCc---hHHHHHHHHHHHhHHHHhc-CCHHHHHHHhcCCCCC-----CHHHHHHHHHHhHhhCCCc
Q psy3426 139 KIFHLWDKLLLGDAS---FPLFIGVSILKQLRETLLS-SGFNECILLFSDLPEV-----DIEQSVTDSIDIYCVTPRS 207 (360)
Q Consensus 139 ~~~~iwD~~l~~~~~---~~~~v~~ail~~~~~~ll~-~~~~~~l~~l~~~~~~-----d~~~li~~A~~l~~~~P~s 207 (360)
.++||||.++++|.. +++++++|+|...|++|++ .|+++++.+|+++|.. |++.+++.|..+......+
T Consensus 262 ~~lrlWD~~l~~g~~~~~~~~~v~~AiL~~~~~~ll~~~d~~~il~~L~~~p~~~~~~~di~~ll~~A~~l~~~~~~~ 339 (345)
T 2qfz_A 262 CTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLFLQNLPTAHWDDEDISLLLAEAYRLKFAFADA 339 (345)
T ss_dssp HHHHHHHHHTTSTTTTTTHHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTSCSCTTCCHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHcCCCcCCchhHHHHHHHHHHHHHHHHHhh
Confidence 999999999999875 6889999999999999995 8999999999999965 6999999999998776544
No 5
>3hzj_A Rabgap1L, RAB GTPase-activating protein 1-like; structural genomics consortium, SGC, alternative splicing, GTPase activation, phosphoprotein; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=307.01 Aligned_cols=196 Identities=22% Similarity=0.394 Sum_probs=180.1
Q ss_pred ceeccCCccCCCCcccCCh--hhHHHHHHHHHHHHHHcCCCCCcccCChhHHHHHHHHHhcCChhHHHHHHHHHHHhhhh
Q psy3426 2 FCYFGFNLCHQYNELLSSK--TGHTKLKRVLKAWVTSHPQFDFVYWQGLDSLCAPFVFLNFNDEATAYACFSTFIPKYLH 79 (360)
Q Consensus 2 ~I~~Dv~Rt~~~~~~f~~~--~~~~~L~~iL~~~~~~~p~~~i~Y~QGm~~i~~~ll~~~~~~e~~~f~~~~~l~~~~~~ 79 (360)
+|++||+||+|.+++|+++ .+++.|+|||.+|+.+||+ +|||||||+||++|++++ +|++|||||+++|.++..
T Consensus 72 ~I~~Dv~Rt~p~~~~f~~~~~~~~~~L~~IL~ay~~~~p~--igY~QGm~~iaa~lL~~~--~e~~aF~~l~~l~~~~~~ 147 (310)
T 3hzj_A 72 VITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYSVYDED--IGYCQGQSFLAAVLLLHM--PEEQAFCVLVKIMYDYGL 147 (310)
T ss_dssp HHHHHHTTSSTTSTTTSSTTSHHHHHHHHHHHHHHHHCTT--TCSCTTHHHHHHHHHHHS--CHHHHHHHHHHHHHTSCG
T ss_pred HHHHHHHhhCCCchhhcCCCchhHHHHHHHHHHHHHHCCC--CCccCCHHHHHHHHHHhC--CHHHHHHHHHHHHhcccc
Confidence 6899999999999999865 6889999999999999999 999999999999999876 899999999999987633
Q ss_pred ccCCCCChHHHHHHHHHHHHHHHHHcHHHHHHHHhcCCCCccchHHHHHHHhcccCCHHHHHHHHHHHhhCCCchHHHHH
Q psy3426 80 NFFLRDNSAVVREYLSKFSHLIAFHDAELANHMSEINFIPELFAIPWFLTMFSHVLPLHKIFHLWDKLLLGDASFPLFIG 159 (360)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~lL~~~dp~L~~hL~~~~~~~~~~~~~W~~~lF~~~l~~~~~~~iwD~~l~~~~~~~~~v~ 159 (360)
..++.++.+++...+..++.+|+.++|+||+||.+.|+.+..|+.+||+|+|++++|++.++||||.++++|..++++++
T Consensus 148 ~~~~~~~~~~~~~~~~~l~~ll~~~~p~L~~hL~~~~i~~~~~~~~W~ltlF~~~lp~~~~~riwD~~l~~g~~~l~~v~ 227 (310)
T 3hzj_A 148 RDLYRNNFEDLHCKFYQLERLMQEQLPDLHSHFSDLNLEAHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFHVA 227 (310)
T ss_dssp GGGTHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTCCGGGTSHHHHHHTTTTTSCHHHHHHHHHHHHHHCTTHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHHHHHhChHHHHHHHHcCCChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHCCcHHHHHHH
Confidence 33445567888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHhcCCHHHHHHHhc-CCC-----CCCHHHHHHHHHHhH
Q psy3426 160 VSILKQLRETLLSSGFNECILLFS-DLP-----EVDIEQSVTDSIDIY 201 (360)
Q Consensus 160 ~ail~~~~~~ll~~~~~~~l~~l~-~~~-----~~d~~~li~~A~~l~ 201 (360)
+|++...|++|++.|+++++.+|+ ++| +.|++.+++.|..+.
T Consensus 228 lail~~~~~~Ll~~d~~~~l~~l~~~lp~~~~~~~d~~~ll~~A~~l~ 275 (310)
T 3hzj_A 228 LALLKTSKEDLLQADFEGALKFFRVQLPKRYRAEENARRLMEQACNIK 275 (310)
T ss_dssp HHHHHHTHHHHHTCCHHHHHHHHHTHHHHTTCSHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHhCcccccccccHHHHHHHHHhcC
Confidence 999999999999999999999986 455 358999999998883
No 6
>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase activator; 2.20A {Homo sapiens} PDB: 3qyb_A
Probab=100.00 E-value=3.2e-40 Score=304.51 Aligned_cols=195 Identities=20% Similarity=0.389 Sum_probs=179.3
Q ss_pred ceeccCCccCCCCcccCCh--hhHHHHHHHHHHHHHHcCCCCCcccCChhHHHHHHHHHhcCChhHHHHHHHHHHHhh-h
Q psy3426 2 FCYFGFNLCHQYNELLSSK--TGHTKLKRVLKAWVTSHPQFDFVYWQGLDSLCAPFVFLNFNDEATAYACFSTFIPKY-L 78 (360)
Q Consensus 2 ~I~~Dv~Rt~~~~~~f~~~--~~~~~L~~iL~~~~~~~p~~~i~Y~QGm~~i~~~ll~~~~~~e~~~f~~~~~l~~~~-~ 78 (360)
+|++||+||+|.+++|+++ .+++.|+|||.+|+.+||+ +|||||||+|+++|+++. +|++|||||+++|+++ +
T Consensus 106 ~I~~Dv~Rt~~~~~~f~~~~~~~~~~L~~IL~ay~~~~p~--igY~QGm~~i~a~ll~~~--~E~~aF~~l~~l~~~~~~ 181 (331)
T 3qye_A 106 AILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQE--VGYCQGLSFVAGILLLHM--SEEEAFKMLKFLMFDMGL 181 (331)
T ss_dssp HHHHHHTTSSTTSTTTCSTTCHHHHHHHHHHHHHHHHCTT--TSSCTTHHHHHHHHHTTS--CHHHHHHHHHHHHTTTCG
T ss_pred HHHHhhcccCCCchhhcCCCcccHHHHHHHHHHHHHHCCC--ccccccHHHHHHHHHHHh--hHHHHHHHHHHHHHhcCc
Confidence 5899999999999999865 7889999999999999999 999999999999988764 8999999999999886 4
Q ss_pred hccCCCCChHHHHHHHHHHHHHHHHHcHHHHHHHHhcCCCCccchHHHHHHHhcccCCHHHHHHHHHHHhhCCCchHHHH
Q psy3426 79 HNFFLRDNSAVVREYLSKFSHLIAFHDAELANHMSEINFIPELFAIPWFLTMFSHVLPLHKIFHLWDKLLLGDASFPLFI 158 (360)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~lL~~~dp~L~~hL~~~~~~~~~~~~~W~~~lF~~~l~~~~~~~iwD~~l~~~~~~~~~v 158 (360)
+.+|. ++.+++...+..++.+|+.++|+||+||.+.++.+..|+.+||+|+|++++|++.++||||.++++|..+++++
T Consensus 182 ~~~~~-~~~~~~~~~~~~l~~ll~~~~p~L~~hL~~~~i~~~~~~~~W~l~lF~~~lp~~~~lrlwD~~l~~g~~~l~~v 260 (331)
T 3qye_A 182 RKQYR-PDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTMFASQFPLGFVARVFDMIFLQGTEVIFKV 260 (331)
T ss_dssp GGGGS-TTCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCGGGTSHHHHHSTTTTTSCHHHHHHHHHHHHHHCTTHHHHH
T ss_pred hhcCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHCCcHHHHHH
Confidence 45444 46788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHhcC-CHHHHHHHhcC-CCCC---CHHHHHHHHHHhH
Q psy3426 159 GVSILKQLRETLLSS-GFNECILLFSD-LPEV---DIEQSVTDSIDIY 201 (360)
Q Consensus 159 ~~ail~~~~~~ll~~-~~~~~l~~l~~-~~~~---d~~~li~~A~~l~ 201 (360)
++|+|...|++|++. ++++++.++++ +|.+ |++.+++.|..+.
T Consensus 261 alaiL~~~~~~ll~~~~~~~il~~l~~~~p~~~~~di~~li~~A~~l~ 308 (331)
T 3qye_A 261 ALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTINQVFEMD 308 (331)
T ss_dssp HHHHHHHTHHHHHTCCSHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHhhCCCCCHHHHHHHHHHHHhCC
Confidence 999999999999995 89999999987 5554 7889999998773
No 7
>3qwl_A TBC1 domain family member 7; RAB GTPase activation, structural genomics consortium, TBC D SGC, hydrolase activator; 1.90A {Homo sapiens}
Probab=99.96 E-value=8.1e-29 Score=221.94 Aligned_cols=155 Identities=17% Similarity=0.343 Sum_probs=140.4
Q ss_pred ccCChhHHHHHHHHHhcCChhHHHHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHHHHHHcHHHHHHHHhcCCCCccch
Q psy3426 44 YWQGLDSLCAPFVFLNFNDEATAYACFSTFIPKYLHNFFLRDNSAVVREYLSKFSHLIAFHDAELANHMSEINFIPELFA 123 (360)
Q Consensus 44 Y~QGm~~i~~~ll~~~~~~e~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~dp~L~~hL~~~~~~~~~~~ 123 (360)
++|||..||+++++++ .+|++|||||+++|++ +..+|.. +.++++.. ++.+|+.+||+|++||.+.|+.+.+++
T Consensus 131 ~~~~~~~Iaa~ll~l~-~~E~dAFW~f~~Lm~~-l~~~f~~-~~~gl~~~---l~~LL~~~dP~L~~HL~~~~i~~~~~~ 204 (294)
T 3qwl_A 131 DDEVFLAIAKAMEEMV-EDSVDCYWITRRFVNQ-LNTKYRD-SLPQLPKA---FEQYLNLEDGRLLTHLRMCSAAPKLPY 204 (294)
T ss_dssp HHHHHHHHHHHHHHHC-CSHHHHHHHHHHHHHH-HHTTTTT-TGGGHHHH---HHHHHHHHCHHHHHHHHHTTCGGGSCH
T ss_pred chhhHHHHHHHHHHHh-CCHHHHHHHHHHHHHH-HHHhhCC-ChhHHHHH---HHHHHHHHHHHHHHHHHHCCCCchhHH
Confidence 4599999999999876 8999999999999998 4555544 57777654 589999999999999999999887777
Q ss_pred HHHHHHHhcccCCHHHHHHHHHHHhhCCCchHHHHHHHHHHHhHHHHhcCCH-HHHHHHhcCCCCCCHHHHHHHHHHhHh
Q psy3426 124 IPWFLTMFSHVLPLHKIFHLWDKLLLGDASFPLFIGVSILKQLRETLLSSGF-NECILLFSDLPEVDIEQSVTDSIDIYC 202 (360)
Q Consensus 124 ~~W~~~lF~~~l~~~~~~~iwD~~l~~~~~~~~~v~~ail~~~~~~ll~~~~-~~~l~~l~~~~~~d~~~li~~A~~l~~ 202 (360)
.+||+++|++++|++.++||||.++++|..+++++|+|+|+..|++|++.++ ++++.+|+++|..|++.+++.|..+++
T Consensus 205 ~rWfl~lF~~~~p~~~vlRlWD~~~~~~~~~l~~valAiL~~~r~~Ll~~~~~~~il~~Lq~lp~~di~~ll~~A~~l~~ 284 (294)
T 3qwl_A 205 DLWFKRCFAGCLPESSLQRVWDKVVSGSCKILVFVAVEILLTFKIKVMALNSAEKITKFLENIPQDSSDAIVSKAIDLWH 284 (294)
T ss_dssp HHHHTSTTTTTSCHHHHHHHHHHHHTTCSTHHHHHHHHHHHHTHHHHHHCCSHHHHHHHHTTCCSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHcCCcccHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999887 888999999999999999999999987
Q ss_pred hC
Q psy3426 203 VT 204 (360)
Q Consensus 203 ~~ 204 (360)
+.
T Consensus 285 ~~ 286 (294)
T 3qwl_A 285 KH 286 (294)
T ss_dssp HH
T ss_pred Hc
Confidence 54
No 8
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.91 E-value=4.9e-25 Score=166.98 Aligned_cols=102 Identities=25% Similarity=0.350 Sum_probs=86.5
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEEc
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIVG 316 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c 316 (360)
..||++++.+.+. +++++++||||++.||+.||||||+|+|++.+. ..+ .. .+++++||+||
T Consensus 2 k~Is~~el~~~l~---~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~-------~~~------~~--l~~~~~ivv~C 63 (103)
T 3iwh_A 2 KSITTDELKNKLL---ESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIP-------DNL------NS--FNKNEIYYIVC 63 (103)
T ss_dssp CEECHHHHHHGGG---SSSCCEEEECSCHHHHTTCBCTTCEECCGGGGG-------GCG------GG--CCTTSEEEEEC
T ss_pred CCcCHHHHHHHHh---CCCCeEEEECCChhHHhcCccCCcccCcccchh-------hhh------hh--hcCCCeEEEEC
Confidence 5689999998872 456789999999999999999999999998774 111 11 24678999999
Q ss_pred CCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCC
Q psy3426 317 GEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGI 358 (360)
Q Consensus 317 ~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~ 358 (360)
.+|. ||..++..|.+.||+++ .|.||+.+|+++|+|++.+
T Consensus 64 ~~G~-rS~~aa~~L~~~G~~~~-~l~GG~~~W~~~g~pvesi 103 (103)
T 3iwh_A 64 AGGV-RSAKVVEYLEANGIDAV-NVEGGMHAWGDEGLEIKSI 103 (103)
T ss_dssp SSSS-HHHHHHHHHHTTTCEEE-EETTHHHHHCSSSCBCCC-
T ss_pred CCCH-HHHHHHHHHHHcCCCEE-EecChHHHHHHCCCcceeC
Confidence 9999 99999999999999765 6999999999999999864
No 9
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.90 E-value=6.4e-24 Score=161.59 Aligned_cols=101 Identities=24% Similarity=0.335 Sum_probs=87.6
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEEc
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIVG 316 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c 316 (360)
+.|+++++.++++ +++++++||||++.||..||||||+|+|+..+. .. ... .+++++||+||
T Consensus 2 ~~is~~el~~~l~---~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~-------~~------~~~--l~~~~~iv~yC 63 (103)
T 3eme_A 2 KSITTDELKNKLL---ESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIP-------DN------LNS--FNKNEIYYIVC 63 (103)
T ss_dssp CEECHHHHHHGGG---SSSCCEEEECSCHHHHTTCBCTTCEECCGGGGG-------GC------GGG--CCTTSEEEEEC
T ss_pred CccCHHHHHHHHh---cCCCCEEEECCCHHHHhcCcCCCCEEcCHHHHH-------HH------HHh--CCCCCeEEEEC
Confidence 5689999999872 356789999999999999999999999998774 11 112 24678999999
Q ss_pred CCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCC
Q psy3426 317 GEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPG 357 (360)
Q Consensus 317 ~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~ 357 (360)
.+|. +|..+++.|.+.|| +|++|+||+.+|+++|+++++
T Consensus 64 ~~g~-rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 64 AGGV-RSAKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp SSSS-HHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred CCCh-HHHHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 9999 99999999999999 999999999999999999876
No 10
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.90 E-value=6.2e-24 Score=160.74 Aligned_cols=99 Identities=23% Similarity=0.368 Sum_probs=85.6
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEEc
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIVG 316 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c 316 (360)
+.|+++++.++++ +++++++||||++.||..||||||+|+|++.+. ..+ .. .+++++||+||
T Consensus 2 ~~is~~el~~~l~---~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~-------~~~------~~--l~~~~~ivvyC 63 (100)
T 3foj_A 2 ESITVTELKEKIL---DANPVNIVDVRTDQETAMGIIPGAETIPMNSIP-------DNL------NY--FNDNETYYIIC 63 (100)
T ss_dssp CEECHHHHHHGGG---SSSCCEEEECSCHHHHTTCBCTTCEECCGGGGG-------GCG------GG--SCTTSEEEEEC
T ss_pred CccCHHHHHHHHh---cCCCcEEEECCCHHHHhcCcCCCCEECCHHHHH-------HHH------Hh--CCCCCcEEEEc
Confidence 5689999999882 356799999999999999999999999998774 111 11 24678999999
Q ss_pred CCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccC
Q psy3426 317 GEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLG 355 (360)
Q Consensus 317 ~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~ 355 (360)
.+|. +|..+++.|.+.|| +|++|+||+.+|+++|+++
T Consensus 64 ~~g~-rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 64 KAGG-RSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp SSSH-HHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred CCCc-hHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 9999 99999999999999 9999999999999999975
No 11
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.88 E-value=2e-23 Score=160.11 Aligned_cols=101 Identities=25% Similarity=0.345 Sum_probs=86.9
Q ss_pred ccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEE
Q psy3426 236 CSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIV 315 (360)
Q Consensus 236 ~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 315 (360)
++.|+++++.+++ ++ +++||||++.||..||||||+|+|+..+. ..... .+++++||+|
T Consensus 3 ~~~is~~el~~~l----~~--~~iiDvR~~~e~~~ghIpgA~~ip~~~l~-------------~~~~~--l~~~~~ivvy 61 (108)
T 3gk5_A 3 YRSINAADLYENI----KA--YTVLDVREPFELIFGSIANSINIPISELR-------------EKWKI--LERDKKYAVI 61 (108)
T ss_dssp CCEECHHHHHHTT----TT--CEEEECSCHHHHTTCBCTTCEECCHHHHH-------------HHGGG--SCTTSCEEEE
T ss_pred ccEeCHHHHHHHH----cC--CEEEECCCHHHHhcCcCCCCEEcCHHHHH-------------HHHHh--CCCCCeEEEE
Confidence 5689999999988 33 89999999999999999999999998764 00111 2467899999
Q ss_pred cCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCCC
Q psy3426 316 GGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGIP 359 (360)
Q Consensus 316 c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~~ 359 (360)
|.+|. ||..+++.|.+.|| +|++|+||+.+|+++|+++...+
T Consensus 62 C~~G~-rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~ 103 (108)
T 3gk5_A 62 CAHGN-RSAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEH 103 (108)
T ss_dssp CSSSH-HHHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC-
T ss_pred cCCCc-HHHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCC
Confidence 99999 99999999999999 99999999999999999987653
No 12
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.86 E-value=1.9e-22 Score=161.39 Aligned_cols=106 Identities=17% Similarity=0.233 Sum_probs=90.4
Q ss_pred ccccccCHHHHHHHhhhcCC-CCCEEEEEcCCccchhh-cc--ccccccccCCCcccCccCCCCCCCCChhhhhHHhcCC
Q psy3426 234 EFCSSLSSTDLLDLINTRFK-KPKVLVIDIRDNEEYVA-ES--IIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKG 309 (360)
Q Consensus 234 ~~~~~is~~~l~~~~~~~~~-~~~~~iiDvR~~~e~~~-gh--IpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (360)
.....|+++++.+++ + ++++++||||++.||.. || ||||+|+|+..+. ........+++
T Consensus 20 ~~~~~is~~el~~~l----~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~-------------~~~~~~~l~~~ 82 (137)
T 1qxn_A 20 ADMVMLSPKDAYKLL----QENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLE-------------PLLAKSGLDPE 82 (137)
T ss_dssp HSSEEECHHHHHHHH----HHCTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSH-------------HHHHHHCCCTT
T ss_pred ccCcccCHHHHHHHH----hcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhh-------------hHHhhccCCCC
Confidence 446789999999998 3 56789999999999999 99 9999999998774 00011123467
Q ss_pred CeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCC
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPG 357 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~ 357 (360)
++||+||.+|. ||..+++.|.+.||++|++|+||+.+|.++|+++++
T Consensus 83 ~~ivvyC~~G~-rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 129 (137)
T 1qxn_A 83 KPVVVFCKTAA-RAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLD 129 (137)
T ss_dssp SCEEEECCSSS-CHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEEC
T ss_pred CeEEEEcCCCc-HHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCccc
Confidence 89999999999 999999999999999999999999999999998764
No 13
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.86 E-value=8.6e-23 Score=156.73 Aligned_cols=101 Identities=10% Similarity=0.218 Sum_probs=86.7
Q ss_pred ccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEE
Q psy3426 236 CSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIV 315 (360)
Q Consensus 236 ~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 315 (360)
++.|+++++.+++ +++++++||||++.||..||||||+|+|+..+. ..... .+++++||+|
T Consensus 4 ~~~i~~~~l~~~~----~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~-------------~~~~~--l~~~~~ivvy 64 (108)
T 1gmx_A 4 FECINVADAHQKL----QEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLG-------------AFMRD--NDFDTPVMVM 64 (108)
T ss_dssp CEEECHHHHHHHH----HTTCCEEEECSCHHHHHHCEETTCEECCHHHHH-------------HHHHH--SCTTSCEEEE
T ss_pred ccccCHHHHHHHH----hCCCCEEEEcCCHHHHHhCCCccCEeCCHHHHH-------------HHHHh--cCCCCCEEEE
Confidence 5689999999988 445689999999999999999999999988663 11111 2467899999
Q ss_pred cCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCC
Q psy3426 316 GGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPG 357 (360)
Q Consensus 316 c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~ 357 (360)
|.+|. +|..+++.|.+.||++|++|+||+.+|+++ ++++.
T Consensus 65 c~~g~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~ 104 (108)
T 1gmx_A 65 CYHGN-SSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEV 104 (108)
T ss_dssp CSSSS-HHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGE
T ss_pred cCCCc-hHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCccc
Confidence 99999 999999999999999999999999999998 77653
No 14
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.86 E-value=2.3e-22 Score=161.66 Aligned_cols=116 Identities=18% Similarity=0.144 Sum_probs=90.3
Q ss_pred ccccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhh-ccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeE
Q psy3426 234 EFCSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVA-ESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSII 312 (360)
Q Consensus 234 ~~~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~-ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 312 (360)
..++.|+++++.++++. .++++++||||++.||.. ||||||+|+|+..+.... ...... .....+++++|
T Consensus 19 ~~~~~is~~~l~~~l~~--~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l~~~~--~~~~~~-----~~~~~~~~~~i 89 (139)
T 2hhg_A 19 SSIETLTTADAIALHKS--GASDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWI--DPQSPY-----AKPIFQEDKKF 89 (139)
T ss_dssp TTSEEECHHHHHHHHHT--TCTTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHH--CTTSTT-----CCGGGGSSSEE
T ss_pred HhcCccCHHHHHHHHhc--cCCCeEEEECCCHHHHHhCCCCCCeEECChHHHHHhc--Cccchh-----hhccCCCCCeE
Confidence 44678999999999821 146799999999999999 999999999998663100 000000 01122467899
Q ss_pred EEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCCC
Q psy3426 313 VIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGIP 359 (360)
Q Consensus 313 v~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~~ 359 (360)
|+||.+|. +|..+++.|.+.||++|++|+||+.+|.++|++++..+
T Consensus 90 vvyC~~G~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~ 135 (139)
T 2hhg_A 90 VFYCAGGL-RSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWA 135 (139)
T ss_dssp EEECSSSH-HHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC---
T ss_pred EEECCCCh-HHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCC
Confidence 99999999 99999999999999999999999999999999987653
No 15
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.86 E-value=6.7e-23 Score=156.67 Aligned_cols=99 Identities=17% Similarity=0.311 Sum_probs=77.2
Q ss_pred HHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhh-HHhcCCCeEEEEcCCCch
Q psy3426 243 DLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNI-LFNNKGSIIVIVGGEDSM 321 (360)
Q Consensus 243 ~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~iv~~c~~g~~ 321 (360)
++.++++ ..++++++||||++.||..||||||+|+|+..+. ... -...++++||+||.+|.
T Consensus 2 el~~~l~--~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~---------------~~~~~~l~~~~~ivvyc~~g~- 63 (106)
T 3hix_A 2 VLKSRLE--WGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLV---------------DRASSSLEKSRDIYVYGAGDE- 63 (106)
T ss_dssp -------------CCEEEECSCHHHHHTCEETTCEECCGGGHH---------------HHHHHHSCTTSCEEEECSSHH-
T ss_pred hHHHHHH--cCCCCeEEEECCCHHHHhcCcCCCCEeCCHHHHH---------------HHHHhcCCCCCeEEEEECCCC-
Confidence 4555551 1245689999999999999999999999998764 011 12346789999999999
Q ss_pred hHHHHHHHHHHcCCCcEEEecccccccccCcccCCCCC
Q psy3426 322 RQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGIP 359 (360)
Q Consensus 322 ~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~~ 359 (360)
+|..+++.|.+.||++|++|+||+.+|+++|++++..+
T Consensus 64 rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~ 101 (106)
T 3hix_A 64 QTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTELEH 101 (106)
T ss_dssp HHHHHHHHHHHTTCSCEEECTTHHHHHHHTTCCEEECC
T ss_pred hHHHHHHHHHHcCCcCEEEecCCHHHHHHCCCCCCCCC
Confidence 99999999999999999999999999999999987654
No 16
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.86 E-value=1.3e-22 Score=163.07 Aligned_cols=102 Identities=19% Similarity=0.346 Sum_probs=87.1
Q ss_pred ccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhH--HhcCCCeEEEE
Q psy3426 238 SLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNIL--FNNKGSIIVIV 315 (360)
Q Consensus 238 ~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~iv~~ 315 (360)
.||++++.++++. ..+++++||||++.||..||||||+|+|+..+. ... ..+++++||+|
T Consensus 1 mIs~~el~~~l~~--~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~----------------~~~~~~l~~~~~ivvy 62 (141)
T 3ilm_A 1 MSDAHVLKSRLEW--GEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLV----------------DRASSSLEKSRDIYVY 62 (141)
T ss_dssp -CCHHHHHHHHHH--SCSCEEEEECSCHHHHHHCEETTCEECCGGGHH----------------HHHHTTSCTTSEEEEE
T ss_pred CCCHHHHHHHHhc--CCCCEEEEECCCHHHHhCCCCCCCEEcCHHHHH----------------HHHHhcCCCCCeEEEE
Confidence 3789999998831 234699999999999999999999999998764 111 23467899999
Q ss_pred cCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCC
Q psy3426 316 GGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGI 358 (360)
Q Consensus 316 c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~ 358 (360)
|.+|. +|..+++.|.+.||++|++|+||+.+|+++|+++++.
T Consensus 63 C~~g~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~ 104 (141)
T 3ilm_A 63 GAGDE-QTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGI 104 (141)
T ss_dssp CSSHH-HHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEE
T ss_pred ECCCh-HHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccC
Confidence 99998 9999999999999999999999999999999998764
No 17
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.86 E-value=5.7e-22 Score=159.30 Aligned_cols=115 Identities=17% Similarity=0.258 Sum_probs=91.0
Q ss_pred ccccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCC-hhhhhH---HhcCC
Q psy3426 234 EFCSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESS-PEMNIL---FNNKG 309 (360)
Q Consensus 234 ~~~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~ 309 (360)
...+.|+++++.++++. .++++++||||++.||..||||||+|+|+..+.+ ...... ...+.+ ..+++
T Consensus 20 ~~~~~is~~el~~~l~~--~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~------~~~~~~~~~~~~~~~~~~~~~ 91 (139)
T 3d1p_A 20 SNIQSYSFEDMKRIVGK--HDPNVVLVDVREPSEYSIVHIPASINVPYRSHPD------AFALDPLEFEKQIGIPKPDSA 91 (139)
T ss_dssp CCCEECCHHHHHHHHHH--TCTTEEEEECSCHHHHHHCCCTTCEECCTTTCTT------GGGSCHHHHHHHHSSCCCCTT
T ss_pred CCcceecHHHHHHHHhC--CCCCeEEEECcCHHHHhCCCCCCcEEcCHHHhhh------hccCCHHHHHHHHhccCCCCC
Confidence 34678999999998831 1367999999999999999999999999997741 100000 001111 12467
Q ss_pred CeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCC
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPG 357 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~ 357 (360)
++||+||.+|. ||..++..|.+.||++|++|+||+.+|.++|+++..
T Consensus 92 ~~ivvyC~~G~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 92 KELIFYCASGK-RGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp SEEEEECSSSH-HHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred CeEEEECCCCc-hHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 89999999999 999999999999999999999999999999998754
No 18
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.85 E-value=3.5e-22 Score=158.32 Aligned_cols=114 Identities=20% Similarity=0.223 Sum_probs=89.8
Q ss_pred hcccccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhH--HhcCC
Q psy3426 232 LSEFCSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNIL--FNNKG 309 (360)
Q Consensus 232 ~~~~~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 309 (360)
.....+.|+++++.+++ + +++++||||++.||..||||||+|+|+..+.. .+.+......... ..+++
T Consensus 13 ~~~~~~~is~~e~~~~l----~-~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~-----~~~~~~~~~~~~~~~~l~~~ 82 (129)
T 1tq1_A 13 ESRVPSSVSVTVAHDLL----L-AGHRYLDVRTPEEFSQGHACGAINVPYMNRGA-----SGMSKNTDFLEQVSSHFGQS 82 (129)
T ss_dssp CSCCCEEEEHHHHHHHH----H-HTCCEEEESCHHHHHHCCBTTBEECCSCCCST-----TTCCCTTTHHHHHTTTCCTT
T ss_pred hcCCCcccCHHHHHHHh----c-CCCEEEECCCHHHHhcCCCCCcEECcHhhccc-----ccccCCHHHHHHHHhhCCCC
Confidence 34456789999999988 2 46789999999999999999999999965531 1111111111111 12467
Q ss_pred CeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCC
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGP 356 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~ 356 (360)
++||+||.+|. ||..+++.|.+.||++|++|+||+.+|.++|++++
T Consensus 83 ~~ivvyC~~G~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (129)
T 1tq1_A 83 DNIIVGCQSGG-RSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK 128 (129)
T ss_dssp SSEEEEESSCS-HHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred CeEEEECCCCc-HHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence 89999999999 99999999999999999999999999999999875
No 19
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.85 E-value=1.5e-22 Score=151.23 Aligned_cols=93 Identities=15% Similarity=0.218 Sum_probs=74.6
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEEc
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIVG 316 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c 316 (360)
+.|+++++.+++ ++ ++++||||++.||..||||||+|+|+..+. ..+ ..+ ++ ++||+||
T Consensus 2 ~~is~~~l~~~~----~~-~~~liDvR~~~e~~~ghi~gAi~ip~~~l~-------~~~------~~l--~~-~~ivvyC 60 (94)
T 1wv9_A 2 RKVRPEELPALL----EE-GVLVVDVRPADRRSTPLPFAAEWVPLEKIQ-------KGE------HGL--PR-RPLLLVC 60 (94)
T ss_dssp CEECGGGHHHHH----HT-TCEEEECCCC--CCSCCSSCCEECCHHHHT-------TTC------CCC--CS-SCEEEEC
T ss_pred CcCCHHHHHHHH----HC-CCEEEECCCHHHHhcccCCCCEECCHHHHH-------HHH------HhC--CC-CCEEEEc
Confidence 468999999988 33 689999999999999999999999998764 111 111 35 7899999
Q ss_pred CCCchhHHHHHHHHHHcCCCcEEEecccccccccCc
Q psy3426 317 GEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYG 352 (360)
Q Consensus 317 ~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~g 352 (360)
.+|. +|..+++.|.+.||+ |++|+||+.+|.++|
T Consensus 61 ~~g~-rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 61 EKGL-LSQVAALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp SSSH-HHHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred CCCC-hHHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 9999 999999999999999 999999999999886
No 20
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.85 E-value=9.9e-22 Score=158.51 Aligned_cols=106 Identities=22% Similarity=0.200 Sum_probs=88.2
Q ss_pred ccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEE
Q psy3426 236 CSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIV 315 (360)
Q Consensus 236 ~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 315 (360)
...|+++++.++++. ..+++++||||++.||..||||||+|+|+..+. ...+ . ..+++++||+|
T Consensus 15 ~~~is~~el~~~l~~--~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~------~~~~------~--~l~~~~~ivvy 78 (144)
T 3nhv_A 15 SYETDIADLSIDIKK--GYEGIIVVDVRDAEAYKECHIPTAISIPGNKIN------EDTT------K--RLSKEKVIITY 78 (144)
T ss_dssp HTEEEHHHHHHHHHT--TCCSEEEEECSCHHHHHHCBCTTCEECCGGGCS------TTTT------T--TCCTTSEEEEE
T ss_pred CcccCHHHHHHHHHc--CCCCEEEEECcCHHHHhcCCCCCCEECCHHHHh------HHHH------h--hCCCCCeEEEE
Confidence 357899999998831 124799999999999999999999999998764 1111 1 12457899999
Q ss_pred cCCC--chhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCCC
Q psy3426 316 GGED--SMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGIP 359 (360)
Q Consensus 316 c~~g--~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~~ 359 (360)
|.+| . +|..+++.|...|| +|++|+||+.+|+++|+++++.+
T Consensus 79 C~~g~~~-rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~~ 122 (144)
T 3nhv_A 79 CWGPACN-GATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTL 122 (144)
T ss_dssp CSCTTCC-HHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSSS
T ss_pred ECCCCcc-HHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCCC
Confidence 9999 6 99999999999999 69999999999999999988653
No 21
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.84 E-value=3.9e-22 Score=156.91 Aligned_cols=110 Identities=11% Similarity=0.142 Sum_probs=88.8
Q ss_pred hhcccccccCHHHHHHHhhhcCCCCCEEEEEcCCccch-hhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCC
Q psy3426 231 ALSEFCSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEY-VAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKG 309 (360)
Q Consensus 231 ~~~~~~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~-~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (360)
+.......|+++++.++++. ..+++++||||++.|| ..||||||+|+|+..+. .... ..+++
T Consensus 9 ~~~~~~~~is~~el~~~l~~--~~~~~~liDvR~~~e~~~~ghIpgA~nip~~~l~-------------~~~~--~l~~~ 71 (124)
T 3flh_A 9 LTTYLSLYIDHHTVLADMQN--ATGKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLA-------------TRIG--ELDPA 71 (124)
T ss_dssp HHHHHTTEECHHHHHHHHHH--TCCCEEEEECCCSCHHHHCCEETTCEECCHHHHH-------------HHGG--GSCTT
T ss_pred HHHhccceecHHHHHHHHHc--CCCCEEEEECCCHHHHHhcCcCCCCEECCHHHHH-------------HHHh--cCCCC
Confidence 33444568999999998831 1245999999999998 99999999999998764 0011 12457
Q ss_pred CeEEEEcCCCchh--HHHHHHHHHHcCCCcEEEecccccccccCcccCCCCC
Q psy3426 310 SIIVIVGGEDSMR--QAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGIP 359 (360)
Q Consensus 310 ~~iv~~c~~g~~~--s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~~ 359 (360)
++||+||.+|. + |..+++.|.+.||+ |++|+||+.+|+++|.++...|
T Consensus 72 ~~ivvyC~~g~-r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~~ 121 (124)
T 3flh_A 72 KTYVVYDWTGG-TTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHHH 121 (124)
T ss_dssp SEEEEECSSSS-CSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC--
T ss_pred CeEEEEeCCCC-chHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCccc
Confidence 89999999999 8 89999999999997 9999999999999999887655
No 22
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.84 E-value=1.2e-21 Score=150.65 Aligned_cols=91 Identities=20% Similarity=0.264 Sum_probs=78.5
Q ss_pred CCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEEcCCCchhHHHHHHHHHHc
Q psy3426 254 KPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIVGGEDSMRQAKFARFIVRL 333 (360)
Q Consensus 254 ~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~~s~~~~~~L~~~ 333 (360)
++++++||||++.||..||||||+|+|+..+. ........+++++||+||.+|. ||..+++.|.+.
T Consensus 14 ~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~-------------~~~~~~~~~~~~~ivvyC~~G~-rs~~aa~~L~~~ 79 (110)
T 2k0z_A 14 FNDFIVVDVRELDEYEELHLPNATLISVNDQE-------------KLADFLSQHKDKKVLLHCRAGR-RALDAAKSMHEL 79 (110)
T ss_dssp GGGSEEEEEECHHHHHHSBCTTEEEEETTCHH-------------HHHHHHHSCSSSCEEEECSSSH-HHHHHHHHHHHT
T ss_pred cCCeEEEECCCHHHHhcCcCCCCEEcCHHHHH-------------HHHHhcccCCCCEEEEEeCCCc-hHHHHHHHHHHC
Confidence 35689999999999999999999999999774 1112223457889999999999 999999999999
Q ss_pred CCCcEEEecccccccccCcccCCCCC
Q psy3426 334 GFPKVTYVHEHVNSFECYGVLGPGIP 359 (360)
Q Consensus 334 G~~~v~~l~GG~~~w~~~gl~~~~~~ 359 (360)
||++ ++|+||+.+|.++|++++..+
T Consensus 80 G~~~-~~l~GG~~~W~~~g~p~~~~~ 104 (110)
T 2k0z_A 80 GYTP-YYLEGNVYDFEKYGFRMVYDD 104 (110)
T ss_dssp TCCC-EEEESCGGGTTTTTCCCBCCC
T ss_pred CCCE-EEecCCHHHHHHCCCcEecCC
Confidence 9999 999999999999999988654
No 23
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.83 E-value=3.4e-21 Score=156.80 Aligned_cols=108 Identities=24% Similarity=0.354 Sum_probs=88.9
Q ss_pred ccccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHH-h-cCCCe
Q psy3426 234 EFCSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILF-N-NKGSI 311 (360)
Q Consensus 234 ~~~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 311 (360)
..++.|+++++.+++ +++++++||||++.||..||||||+|+|+..+. .. ...+. . +++++
T Consensus 25 ~~~~~Is~~el~~~l----~~~~~~lIDvR~~~ey~~ghIpgAinip~~~l~-------~~------~~~l~~~~~~~~~ 87 (152)
T 1t3k_A 25 RSISYITSTQLLPLH----RRPNIAIIDVRDEERNYDGHIAGSLHYASGSFD-------DK------ISHLVQNVKDKDT 87 (152)
T ss_dssp SSSEEECTTTTTTCC----CCTTEEEEEESCSHHHHSSCCCSSEEECCSSSS-------TT------HHHHHHTCCSCCE
T ss_pred CCCceECHHHHHHHh----cCCCEEEEECCChhhccCccCCCCEECCHHHHH-------HH------HHHHHHhcCCCCE
Confidence 345789999998887 567899999999999999999999999998764 11 12221 1 46789
Q ss_pred EEEEcC-CCchhHHHHHHHHHH--------cCCCcEEEecccccccccCcccCCCCC
Q psy3426 312 IVIVGG-EDSMRQAKFARFIVR--------LGFPKVTYVHEHVNSFECYGVLGPGIP 359 (360)
Q Consensus 312 iv~~c~-~g~~~s~~~~~~L~~--------~G~~~v~~l~GG~~~w~~~gl~~~~~~ 359 (360)
||+||. +|. ++..++..|.+ .||++|++|+||+.+|+++|++++..+
T Consensus 88 iVvyC~~~G~-rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 143 (152)
T 1t3k_A 88 LVFHSALSQV-RGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCA 143 (152)
T ss_dssp EEESSSCCSS-SHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCS
T ss_pred EEEEcCCCCc-chHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCC
Confidence 999999 888 89888887753 799999999999999999999988654
No 24
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.81 E-value=2.6e-20 Score=151.15 Aligned_cols=111 Identities=11% Similarity=0.184 Sum_probs=85.3
Q ss_pred ccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhh-ccc------cccccccCCCcccCccCCCCCCCCChhhhhH----
Q psy3426 236 CSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVA-ESI------IGSINIPLARIPDLESTDLGSMESSPEMNIL---- 304 (360)
Q Consensus 236 ~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~-ghI------pgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~---- 304 (360)
.+.|+++++.++++ +++++++||||++.||.. ||| |||+|+|+.... ..... .....+
T Consensus 4 ~~~is~~el~~~l~---~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~~~-------~~~~~-~~~~~l~~~l 72 (148)
T 2fsx_A 4 AGDITPLQAWEMLS---DNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWATSD-------GTHND-NFLAELRDRI 72 (148)
T ss_dssp SEEECHHHHHHHHH---HCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBCTT-------SCBCT-THHHHHHHHC
T ss_pred cccCCHHHHHHHHh---cCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeeccc-------cccCH-HHHHHHHHHH
Confidence 45799999999882 135789999999999997 999 999999998621 10000 001112
Q ss_pred ---HhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccc------------cccccCcccCCCC
Q psy3426 305 ---FNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHV------------NSFECYGVLGPGI 358 (360)
Q Consensus 305 ---~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~------------~~w~~~gl~~~~~ 358 (360)
..+++++||+||.+|. ||..+++.|.+.||++|++|+||+ .+|+++|++++..
T Consensus 73 ~~~~~~~~~~ivvyC~~G~-rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~ 140 (148)
T 2fsx_A 73 PADADQHERPVIFLCRSGN-RSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQG 140 (148)
T ss_dssp C-------CCEEEECSSSS-THHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC
T ss_pred hhccCCCCCEEEEEcCCCh-hHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCcc
Confidence 1256789999999999 999999999999999999999999 7899999987653
No 25
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.79 E-value=3.9e-20 Score=135.39 Aligned_cols=80 Identities=19% Similarity=0.356 Sum_probs=68.7
Q ss_pred CEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEEcCCCchhHHHHHHHHHHcCC
Q psy3426 256 KVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIVGGEDSMRQAKFARFIVRLGF 335 (360)
Q Consensus 256 ~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~ 335 (360)
++++||||++.||+.||||||+|+|++.+. .....+..+++++||+||.+|. +|..+++.|.+.||
T Consensus 1 ~~~liDvR~~~e~~~ghIpgA~~ip~~~l~-------------~~~~~l~~~~~~~ivv~C~~g~-rs~~aa~~L~~~G~ 66 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQGAINIPLKEVK-------------ERIATAVPDKNDTVKVYCNAGR-QSGQAKEILSEMGY 66 (85)
T ss_dssp CEEEEECSCHHHHTTEEETTCEECCHHHHH-------------HHHHHHCCCTTSEEEEEESSSH-HHHHHHHHHHHTTC
T ss_pred CCEEEECCCHHHHHhCCCCCCEEcCHHHHH-------------HHHHHhCCCCCCcEEEEcCCCc-hHHHHHHHHHHcCC
Confidence 468999999999999999999999998664 1122333356889999999999 99999999999999
Q ss_pred CcEEEeccccccccc
Q psy3426 336 PKVTYVHEHVNSFEC 350 (360)
Q Consensus 336 ~~v~~l~GG~~~w~~ 350 (360)
++|+++ ||+.+|..
T Consensus 67 ~~v~~l-GG~~~w~~ 80 (85)
T 2jtq_A 67 THVENA-GGLKDIAM 80 (85)
T ss_dssp SSEEEE-EETTTCCS
T ss_pred CCEEec-cCHHHHhc
Confidence 999999 99999965
No 26
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.79 E-value=1.5e-20 Score=148.62 Aligned_cols=108 Identities=16% Similarity=0.120 Sum_probs=82.2
Q ss_pred ccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCC-------C
Q psy3426 238 SLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKG-------S 310 (360)
Q Consensus 238 ~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 310 (360)
.|+++++.++++ +++++++||||++.||..||||||+|+|+..+.. ...... ......+...++ +
T Consensus 2 ~is~~el~~~l~---~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~----~~~~~~-~~~~~~l~~~~~~~~~~~~~ 73 (127)
T 3i2v_A 2 RVSVTDYKRLLD---SGAFHLLLDVRPQVEVDICRLPHALHIPLKHLER----RDAESL-KLLKEAIWEEKQGTQEGAAV 73 (127)
T ss_dssp EECHHHHHHHHH---HTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHT----TCHHHH-HHHHHHHHHHHTTC---CCE
T ss_pred CCCHHHHHHHHh---CCCCeEEEECCCHHHhhheecCCceeCChHHHhh----hhhhhH-HHHHHHHhhhcccccCCCCC
Confidence 589999999883 2346899999999999999999999999987641 000000 000111222223 4
Q ss_pred eEEEEcCCCchhHHHHHHHHHHc------CCCcEEEecccccccccCccc
Q psy3426 311 IIVIVGGEDSMRQAKFARFIVRL------GFPKVTYVHEHVNSFECYGVL 354 (360)
Q Consensus 311 ~iv~~c~~g~~~s~~~~~~L~~~------G~~~v~~l~GG~~~w~~~gl~ 354 (360)
+||+||.+|. +|..+++.|.+. |+.+|++|+||+.+|.+++-+
T Consensus 74 ~ivv~C~~G~-rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~ 122 (127)
T 3i2v_A 74 PIYVICKLGN-DSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG 122 (127)
T ss_dssp EEEEECSSSS-HHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred eEEEEcCCCC-cHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence 9999999999 999999999998 689999999999999988765
No 27
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.78 E-value=3.5e-19 Score=141.90 Aligned_cols=108 Identities=12% Similarity=0.080 Sum_probs=85.9
Q ss_pred ccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhh-ccc------cccccccCCCcccCccCCCCCCCCChhhhhHHh--
Q psy3426 236 CSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVA-ESI------IGSINIPLARIPDLESTDLGSMESSPEMNILFN-- 306 (360)
Q Consensus 236 ~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~-ghI------pgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 306 (360)
...|+++++.++++ +++++++||||++.||.. +|+ |||+|+|+..+. ... ....+..
T Consensus 4 ~~~is~~e~~~~l~---~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~~------~~~-----~~~~l~~~~ 69 (134)
T 1vee_A 4 GSSGSAKNAYTKLG---TDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGED------KPG-----FLKKLSLKF 69 (134)
T ss_dssp SCBCCHHHHHHHHH---HCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGG------HHH-----HHHHHHTTC
T ss_pred CCccCHHHHHHHHH---hCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeeccccc------Chh-----HHHHHHHHh
Confidence 46799999999882 146789999999999986 444 699999987542 000 0112211
Q ss_pred --cCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccc---cccccCcccCCCC
Q psy3426 307 --NKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHV---NSFECYGVLGPGI 358 (360)
Q Consensus 307 --~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~---~~w~~~gl~~~~~ 358 (360)
+++++||+||.+|. ||..++..|.+.||++|++|.||+ .+|+++|++++..
T Consensus 70 ~~~~~~~ivv~C~sG~-RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~ 125 (134)
T 1vee_A 70 KDPENTTLYILDKFDG-NSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEP 125 (134)
T ss_dssp SCGGGCEEEEECSSST-THHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECC
T ss_pred CCCCCCEEEEEeCCCC-cHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCC
Confidence 46789999999999 999999999999999999999999 7899999998754
No 28
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.78 E-value=2.7e-19 Score=160.15 Aligned_cols=120 Identities=13% Similarity=0.156 Sum_probs=92.1
Q ss_pred ccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCC----hhhhhHHhcCCCe
Q psy3426 236 CSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESS----PEMNILFNNKGSI 311 (360)
Q Consensus 236 ~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 311 (360)
.+.|+++++.+++ +++++++||||++.||..||||||+|+|+..+..........+... .....+...++++
T Consensus 8 ~~~is~~~l~~~l----~~~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 83 (271)
T 1e0c_A 8 PLVIEPADLQARL----SAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAV 83 (271)
T ss_dssp CSEECHHHHHTTT----TCTTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCE
T ss_pred CceeeHHHHHHhc----cCCCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCe
Confidence 3589999999988 5678999999999999999999999999987642110000001000 1122222357889
Q ss_pred EEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCCC
Q psy3426 312 IVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGIP 359 (360)
Q Consensus 312 iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~~ 359 (360)
||+||++|..+|.++++.|...||++|++|+||+.+|+++|++++..+
T Consensus 84 vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~ 131 (271)
T 1e0c_A 84 YVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSREL 131 (271)
T ss_dssp EEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCC
T ss_pred EEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCC
Confidence 999999876589999999999999999999999999999999887643
No 29
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.77 E-value=3.7e-19 Score=162.49 Aligned_cols=115 Identities=12% Similarity=0.095 Sum_probs=88.9
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccc-hhhccccccccccCCC-cccCccCCCCCCCCC----hhhhhHHhcCCC
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEE-YVAESIIGSINIPLAR-IPDLESTDLGSMESS----PEMNILFNNKGS 310 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e-~~~ghIpgA~~i~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 310 (360)
..|+++++.+++ ++++++|||||++.| |..||||||+|+|+.. +.+. ....+... ...+.+...+++
T Consensus 40 ~~is~~~l~~~l----~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~---~~~~~~~~~~~~~~l~~lgi~~~~ 112 (318)
T 3hzu_A 40 RLVTADWLSAHM----GAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDP---RVRDYINGEQFAELMDRKGIARDD 112 (318)
T ss_dssp GEECHHHHHHHT----TCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCS---SSSSBCCHHHHHHHHHHTTCCTTC
T ss_pred ceecHHHHHHhc----cCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccC---cccCCCCHHHHHHHHHHcCCCCCC
Confidence 579999999998 667899999999876 9999999999999742 1100 00111110 111222234688
Q ss_pred eEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCC
Q psy3426 311 IIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGI 358 (360)
Q Consensus 311 ~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~ 358 (360)
+||+||.+|..+|.++++.|+..||++|++|+||+.+|+++|++++..
T Consensus 113 ~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~ 160 (318)
T 3hzu_A 113 TVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLD 160 (318)
T ss_dssp EEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCC
T ss_pred eEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccC
Confidence 999999987658999999999999999999999999999999998763
No 30
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.76 E-value=2.3e-19 Score=147.71 Aligned_cols=113 Identities=16% Similarity=0.211 Sum_probs=84.7
Q ss_pred cccccCHHHHHHHhhhcC--CCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeE
Q psy3426 235 FCSSLSSTDLLDLINTRF--KKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSII 312 (360)
Q Consensus 235 ~~~~is~~~l~~~~~~~~--~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 312 (360)
..+.|+++++.++++.+. ..+++++||||++.||..||||||+|+|...+.. ..... ...+ ..+++++
T Consensus 21 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~~~~------~~~~~---~~~~-~~~~~~i 90 (161)
T 1c25_A 21 DLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVE------DFLLK---KPIV-PTDGKRV 90 (161)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHH------HHTTT---SCCC-CCTTSEE
T ss_pred CcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChhHHHH------HHHhh---hhhc-cCCCCCe
Confidence 457899999999982100 0147899999999999999999999999986530 00000 0001 1346665
Q ss_pred --EEEcC-CCchhHHHHHHHHHHc----------CCCcEEEecccccccccCcccCCCC
Q psy3426 313 --VIVGG-EDSMRQAKFARFIVRL----------GFPKVTYVHEHVNSFECYGVLGPGI 358 (360)
Q Consensus 313 --v~~c~-~g~~~s~~~~~~L~~~----------G~~~v~~l~GG~~~w~~~gl~~~~~ 358 (360)
|+||. +|. |+..++..|.+. ||++|++|+||+.+|.++|.+....
T Consensus 91 vvv~yC~~sg~-rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~ 148 (161)
T 1c25_A 91 IVVFHCEFSSE-RGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEP 148 (161)
T ss_dssp EEEEECSSSSS-HHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEES
T ss_pred EEEEEcCCCCc-chHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCC
Confidence 67899 888 999999999864 9999999999999999999876543
No 31
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.76 E-value=2e-19 Score=143.39 Aligned_cols=107 Identities=19% Similarity=0.238 Sum_probs=77.4
Q ss_pred ccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCcc-------------------CCCCCCC
Q psy3426 236 CSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLES-------------------TDLGSME 296 (360)
Q Consensus 236 ~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~-------------------~~~~~~~ 296 (360)
++.|+++++.+ .+++++||||++.||..||||||+|+|+..+..... ...+.+.
T Consensus 4 ~~~i~~~el~~-------~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (134)
T 3g5j_A 4 MSVIKIEKALK-------LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLK 76 (134)
T ss_dssp -CEECHHHHTT-------CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHH
T ss_pred ccccCHHHHHh-------cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHH
Confidence 45778887653 467999999999999999999999999975420000 0000000
Q ss_pred CChhhhhH-HhcCC-CeEEEEc-CCCchhHHHHHHHHHHcCCCcEEEecccccccccCcc
Q psy3426 297 SSPEMNIL-FNNKG-SIIVIVG-GEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGV 353 (360)
Q Consensus 297 ~~~~~~~~-~~~~~-~~iv~~c-~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl 353 (360)
.....+ ...++ ++||+|| .+|. +|..+++.|...|| +|++|+||+.+|++..+
T Consensus 77 --~~~~~~~~~~~~~~~ivvyC~~~G~-rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~~~ 132 (134)
T 3g5j_A 77 --DIYLQAAELALNYDNIVIYCARGGM-RSGSIVNLLSSLGV-NVYQLEGGYKAYRNFVL 132 (134)
T ss_dssp --HHHHHHHHHHTTCSEEEEECSSSSH-HHHHHHHHHHHTTC-CCEEETTHHHHHHHHHT
T ss_pred --HHHHHHHHhccCCCeEEEEECCCCh-HHHHHHHHHHHcCC-ceEEEeCcHHHHHHHhh
Confidence 001111 12356 8999999 5888 99999999999999 99999999999987544
No 32
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.76 E-value=8.5e-19 Score=157.61 Aligned_cols=118 Identities=16% Similarity=0.180 Sum_probs=90.6
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcC----------CccchhhccccccccccCCCcccCccCCCCCCCCC----hhhh
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIR----------DNEEYVAESIIGSINIPLARIPDLESTDLGSMESS----PEMN 302 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR----------~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~----~~~~ 302 (360)
+.|+++++.+++ +++++++|||| ++.||..||||||+|+|+..+.+........+... ....
T Consensus 4 ~~is~~~l~~~l----~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~ 79 (280)
T 1urh_A 4 WFVGADWLAEHI----DDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMR 79 (280)
T ss_dssp CEECHHHHHTTT----TCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHH
T ss_pred ceeeHHHHHHhc----CCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHH
Confidence 578999999988 55789999999 67899999999999999987642110000000000 1112
Q ss_pred hHHhcCCCeEEEEcCCCchh-HHHHHHHHHHcCCCcEEEecccccccccCcccCCCCC
Q psy3426 303 ILFNNKGSIIVIVGGEDSMR-QAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGIP 359 (360)
Q Consensus 303 ~~~~~~~~~iv~~c~~g~~~-s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~~ 359 (360)
.+...++++||+||.+|. + |.++++.|...||++|++|+||+.+|+++|++++..+
T Consensus 80 ~~gi~~~~~ivvyc~~g~-~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~ 136 (280)
T 1urh_A 80 ELGVNQDKHLIVYDEGNL-FSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGA 136 (280)
T ss_dssp HTTCCTTSEEEEECSSSC-SSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSC
T ss_pred HcCCCCCCeEEEECCCCC-ccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCC
Confidence 222356889999999998 8 9999999999999999999999999999999887643
No 33
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.76 E-value=1.1e-18 Score=142.15 Aligned_cols=111 Identities=23% Similarity=0.220 Sum_probs=80.9
Q ss_pred ccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEE
Q psy3426 236 CSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIV 315 (360)
Q Consensus 236 ~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 315 (360)
++.|+++++.++++.+...++++|||||++ ||..||||||+|+|+..+. ...+. ...+.+.....+.||+|
T Consensus 4 ~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~------~~~~~--~l~~~l~~~~~~~vV~y 74 (152)
T 2j6p_A 4 YTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCT------EEMYE--KLAKTLFEEKKELAVFH 74 (152)
T ss_dssp CEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCC------HHHHH--HHHHHHHHTTCCEEEEE
T ss_pred cCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhh------HHHHH--HHHHHhcccCCCEEEEE
Confidence 568999999998821000037999999999 9999999999999998763 10110 11122222223467778
Q ss_pred c-CCCchhHHHHH----HHHHHcCC--CcEEEecccccccccCcccCC
Q psy3426 316 G-GEDSMRQAKFA----RFIVRLGF--PKVTYVHEHVNSFECYGVLGP 356 (360)
Q Consensus 316 c-~~g~~~s~~~~----~~L~~~G~--~~v~~l~GG~~~w~~~gl~~~ 356 (360)
| .+|. |+..++ +.|.+.|| ++|++|+||+.+|.++|.+..
T Consensus 75 C~~sg~-rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~ 121 (152)
T 2j6p_A 75 CAQSLV-RAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVR 121 (152)
T ss_dssp CSSSSS-HHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTC
T ss_pred cCCCCC-ccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCC
Confidence 9 6888 888887 77788897 599999999999999987654
No 34
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.76 E-value=8.5e-19 Score=154.18 Aligned_cols=106 Identities=20% Similarity=0.281 Sum_probs=88.0
Q ss_pred ccccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEE
Q psy3426 234 EFCSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIV 313 (360)
Q Consensus 234 ~~~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv 313 (360)
...+.|+++++.+++ +++++++||||++.||+.||||||+|+|+..+.+ ... .....+...++++||
T Consensus 119 ~~~~~Is~~el~~ll----~~~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~~-------~~~--~l~~~l~~~kdk~IV 185 (265)
T 4f67_A 119 NAGTYLSPEEWHQFI----QDPNVILLDTRNDYEYELGTFKNAINPDIENFRE-------FPD--YVQRNLIDKKDKKIA 185 (265)
T ss_dssp CTTCEECHHHHHHHT----TCTTSEEEECSCHHHHHHEEETTCBCCCCSSGGG-------HHH--HHHHHTGGGTTSCEE
T ss_pred CCCceECHHHHHHHh----cCCCeEEEEeCCchHhhcCcCCCCEeCCHHHHHh-------hHH--HHHHhhhhCCCCeEE
Confidence 446789999999999 6678999999999999999999999999987640 000 001123346788999
Q ss_pred EEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcc
Q psy3426 314 IVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGV 353 (360)
Q Consensus 314 ~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl 353 (360)
+||.+|. ||..+++.|.+.||++|++|+||+.+|.++.-
T Consensus 186 vyC~~G~-RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~ 224 (265)
T 4f67_A 186 MFCTGGI-RCEKTTAYMKELGFEHVYQLHDGILNYLESIP 224 (265)
T ss_dssp EECSSSH-HHHHHHHHHHHHTCSSEEEETTHHHHHHHHSC
T ss_pred EEeCCCh-HHHHHHHHHHHcCCCCEEEecCHHHHHHHhcC
Confidence 9999999 99999999999999999999999999987643
No 35
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.76 E-value=8.6e-19 Score=156.81 Aligned_cols=112 Identities=17% Similarity=0.125 Sum_probs=89.7
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccchh--------hccccccccccCCCcccCccCCCCCCC-CChhhhhH---
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYV--------AESIIGSINIPLARIPDLESTDLGSME-SSPEMNIL--- 304 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~--------~ghIpgA~~i~~~~~~~~~~~~~~~~~-~~~~~~~~--- 304 (360)
..|+++++.+.+ +++++++||||++.||. .||||||+|+|+..+.+.. +.+. .....+.+
T Consensus 147 ~~i~~~~l~~~l----~~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~----~~~~~~~~l~~~~~~~ 218 (271)
T 1e0c_A 147 PTASRDYLLGRL----GAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPS----RALRIRTDIAGRLEEL 218 (271)
T ss_dssp TBCCHHHHHHHT----TCTTEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGG----GTTEECTTHHHHHHHT
T ss_pred ccccHHHHHHHh----cCCCcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCC----CCCCCHHHHHHHHHHc
Confidence 468999999988 56779999999999999 8999999999998764111 0110 00111222
Q ss_pred HhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccC-cccCCC
Q psy3426 305 FNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECY-GVLGPG 357 (360)
Q Consensus 305 ~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~-gl~~~~ 357 (360)
..+++++||+||.+|. ||..++..|...||++|++|+||+.+|.++ |+++++
T Consensus 219 ~~~~~~~ivvyC~~G~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~~ 271 (271)
T 1e0c_A 219 GITPDKEIVTHCQTHH-RSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL 271 (271)
T ss_dssp TCCTTSEEEEECSSSS-HHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred CCCCCCCEEEECCchH-HHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence 2356889999999999 999999999999999999999999999998 998763
No 36
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.75 E-value=9.5e-19 Score=157.05 Aligned_cols=116 Identities=14% Similarity=0.137 Sum_probs=88.9
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCC-ccchhhccccccccccCCCcccCccCCCCCCCCC----hhhhhHHhcCCCe
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRD-NEEYVAESIIGSINIPLARIPDLESTDLGSMESS----PEMNILFNNKGSI 311 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~-~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 311 (360)
+.|+++++.+++ +++++++||||+ +.||..||||||+|+|+..+.... . ...+... .....+...++++
T Consensus 6 ~~is~~~l~~~l----~~~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~-~-~~~~~~~~~~~~~~~~~gi~~~~~ 79 (277)
T 3aay_A 6 VLVSADWAESNL----HAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDP-V-KRDFVDAQQFSKLLSERGIANEDT 79 (277)
T ss_dssp HEECHHHHHTTT----TCTTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCS-S-SSSBCCHHHHHHHHHHHTCCTTSE
T ss_pred ceEcHHHHHHHh----CCCCEEEEEcCCChhhHhhCCCCCcEEecccccccCC-C-CCCCCCHHHHHHHHHHcCCCCCCe
Confidence 468999999988 556799999998 899999999999999987642100 0 0111000 1112222456789
Q ss_pred EEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCC
Q psy3426 312 IVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGI 358 (360)
Q Consensus 312 iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~ 358 (360)
||+||.+|..+|.++++.|...||++|++|+||+.+|+++|++++..
T Consensus 80 vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~ 126 (277)
T 3aay_A 80 VILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSD 126 (277)
T ss_dssp EEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCC
T ss_pred EEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccC
Confidence 99999987536899999999999999999999999999999988764
No 37
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.75 E-value=8.5e-19 Score=141.12 Aligned_cols=117 Identities=15% Similarity=0.107 Sum_probs=78.2
Q ss_pred ccCHHHHHHHhhh----cCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhh------hhHHhc
Q psy3426 238 SLSSTDLLDLINT----RFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEM------NILFNN 307 (360)
Q Consensus 238 ~is~~~l~~~~~~----~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 307 (360)
.|+++++.+.+.. .-.++++++||||++.||..||||||+|+|+..+........+........ ......
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRI 81 (142)
T ss_dssp EECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHHH
T ss_pred ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhcc
Confidence 5789999883311 004567899999999999999999999999987531000000111000000 011001
Q ss_pred CCCeEEEEcCCCchhH---------HHHHHHHHHcCCCcEEEecccccccccCcccCC
Q psy3426 308 KGSIIVIVGGEDSMRQ---------AKFARFIVRLGFPKVTYVHEHVNSFECYGVLGP 356 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s---------~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~ 356 (360)
++++||+||.+|. ++ ..++..|...|| +|++|+||+.+|.++|.++.
T Consensus 82 ~~~~ivvyc~~g~-~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~ 137 (142)
T 2ouc_A 82 FSKEIIVYDENTN-EPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLC 137 (142)
T ss_dssp HHSCEEEECSSCC-CGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGE
T ss_pred CCCcEEEEECCCC-chhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhh
Confidence 2578999999998 64 568888999999 99999999999999998754
No 38
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.75 E-value=9.6e-19 Score=146.02 Aligned_cols=111 Identities=19% Similarity=0.251 Sum_probs=81.2
Q ss_pred cccccCHHHHHHHhhhcC--CCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeE
Q psy3426 235 FCSSLSSTDLLDLINTRF--KKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSII 312 (360)
Q Consensus 235 ~~~~is~~~l~~~~~~~~--~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 312 (360)
..+.|+++++.++++.+. ..+++++||||++.||..||||||+|+|+..+.. .... ....+...++++|
T Consensus 22 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~------~~~~---~~~~~~~~~~~~i 92 (175)
T 2a2k_A 22 DLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAE------SFLL---KSPIAPCSLDKRV 92 (175)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHH------HHHH---SSCCCC----CEE
T ss_pred CCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChhHHHH------Hhhh---hhhhccccCCCCe
Confidence 467899999999982100 0047899999999999999999999999986530 0000 0001111246677
Q ss_pred EE--EcC-CCchhHHHHHHHHHH----------cCCCcEEEecccccccccCcccC
Q psy3426 313 VI--VGG-EDSMRQAKFARFIVR----------LGFPKVTYVHEHVNSFECYGVLG 355 (360)
Q Consensus 313 v~--~c~-~g~~~s~~~~~~L~~----------~G~~~v~~l~GG~~~w~~~gl~~ 355 (360)
|+ ||. +|. +|..+++.|.+ .||++|++|+||+.+|.++|.+.
T Consensus 93 vvv~yC~~~g~-rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~ 147 (175)
T 2a2k_A 93 ILIFHSEFSSE-RGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF 147 (175)
T ss_dssp EEEEECSSSSS-HHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred EEEEECCCCCC-ccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccc
Confidence 44 698 888 99999999985 49999999999999999999875
No 39
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.75 E-value=8e-19 Score=150.72 Aligned_cols=109 Identities=18% Similarity=0.204 Sum_probs=85.3
Q ss_pred ccccccCHHHHHHHhhhcCCC------CCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhc
Q psy3426 234 EFCSSLSSTDLLDLINTRFKK------PKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNN 307 (360)
Q Consensus 234 ~~~~~is~~~l~~~~~~~~~~------~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (360)
...+.|+++++.+++ ++ +++++||||++.||..||||||+|+|+..+. ...+ .....+...
T Consensus 41 ~~~~~Is~~el~~~l----~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~~l~------~~~~---~~~~~l~~~ 107 (211)
T 1qb0_A 41 QDLKYISPETMVALL----TGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDA------ESFL---LKSPIAPCS 107 (211)
T ss_dssp TTSCEECHHHHHHHH----TTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHH------HHHH---HTTTCCCSS
T ss_pred CCCCeeCHHHHHHHH----hcccccCCCCEEEEECCCHHHHccCcCCCCEECCchHHH------HHhh---hhhhhcccc
Confidence 346789999999998 33 4789999999999999999999999997653 0000 000011122
Q ss_pred CCCeE--EEEcC-CCchhHHHHHHHHHH----------cCCCcEEEecccccccccCcccCC
Q psy3426 308 KGSII--VIVGG-EDSMRQAKFARFIVR----------LGFPKVTYVHEHVNSFECYGVLGP 356 (360)
Q Consensus 308 ~~~~i--v~~c~-~g~~~s~~~~~~L~~----------~G~~~v~~l~GG~~~w~~~gl~~~ 356 (360)
++++| |+||. +|. ++..+++.|.+ .||++|++|+||+.+|.++|.+..
T Consensus 108 ~d~~ivvVvyC~~sG~-rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~ 168 (211)
T 1qb0_A 108 LDKRVILIFHCEFSSE-RGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFC 168 (211)
T ss_dssp TTSEEEEEEECSSSSS-HHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGE
T ss_pred CCCCeEEEEECCCCCc-cHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCcccc
Confidence 56776 78899 899 99999999986 699999999999999999998763
No 40
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.74 E-value=7.8e-19 Score=143.29 Aligned_cols=116 Identities=16% Similarity=0.154 Sum_probs=80.8
Q ss_pred ccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChh-----hhhHHhcCCC
Q psy3426 236 CSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPE-----MNILFNNKGS 310 (360)
Q Consensus 236 ~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 310 (360)
.+.|+++++.++++. .+++++|||||++.||..||||||+|+|+..+... ....+....... ...+...+++
T Consensus 3 ~~~Is~~~l~~~l~~--~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~-~~~~~~~~~~~ll~~~~~~~~~~~~~~ 79 (153)
T 2vsw_A 3 GTQIVTERLVALLES--GTEKVLLIDSRPFVEYNTSHILEAININCSKLMKR-RLQQDKVLITELIQHSAKHKVDIDCSQ 79 (153)
T ss_dssp CEEECHHHHHHHHTS--TTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHH-HHHTTSSCHHHHHHHSCSSCCCCCTTS
T ss_pred CccccHHHHHHHHhc--CCCCEEEEECCCHHHhccCccCCCeeeChHHHHHh-hhhcCCcCHHHhcCchhhhhhccCCCC
Confidence 367899999999821 13679999999999999999999999999875200 000011000000 0011224678
Q ss_pred eEEEEcCCCchhHHHH------HHHHH--HcCCCcEEEecccccccccCcccC
Q psy3426 311 IIVIVGGEDSMRQAKF------ARFIV--RLGFPKVTYVHEHVNSFECYGVLG 355 (360)
Q Consensus 311 ~iv~~c~~g~~~s~~~------~~~L~--~~G~~~v~~l~GG~~~w~~~gl~~ 355 (360)
+||+||.+|. ++..+ ++.|. +.||++|++|+||+.+|.+++.+.
T Consensus 80 ~iVvyc~~g~-~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~ 131 (153)
T 2vsw_A 80 KVVVYDQSSQ-DVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGL 131 (153)
T ss_dssp EEEEECSSCC-CGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGG
T ss_pred eEEEEeCCCC-cccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhh
Confidence 9999999998 76655 46666 349999999999999998876443
No 41
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.73 E-value=1.6e-18 Score=148.29 Aligned_cols=104 Identities=18% Similarity=0.186 Sum_probs=78.9
Q ss_pred ccccccCHHHHHHHhhhcCCCC------CEEEEEcCCccchhhccccccccccCCC-cccCccCCCCCCCCChhhhhHHh
Q psy3426 234 EFCSSLSSTDLLDLINTRFKKP------KVLVIDIRDNEEYVAESIIGSINIPLAR-IPDLESTDLGSMESSPEMNILFN 306 (360)
Q Consensus 234 ~~~~~is~~~l~~~~~~~~~~~------~~~iiDvR~~~e~~~ghIpgA~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 306 (360)
..++.|+++++.+++ +++ +++|||||++.||+.||||||+|+|..+ +. ..+.. ......
T Consensus 54 ~~~~~Is~~eL~~~l----~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~~~l~-------~~l~~---~~~~~~ 119 (216)
T 3op3_A 54 QDLKYVNPETVAALL----SGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQEELF-------NFFLK---KPIVPL 119 (216)
T ss_dssp SSSEEECHHHHHHHH----TTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSHHHHH-------HHHTS---SCCCCS
T ss_pred CCCCEeCHHHHHHHH----hCCCccccCCEEEEEeCcHHHHhcCCccCCEECChHHHHH-------HHHhh---cccccc
Confidence 346789999999999 333 7899999999999999999999999874 21 00000 001111
Q ss_pred cCCC--eEEEEcC-CCchhHHHHHHHHHHc----------CCCcEEEecccccccccCc
Q psy3426 307 NKGS--IIVIVGG-EDSMRQAKFARFIVRL----------GFPKVTYVHEHVNSFECYG 352 (360)
Q Consensus 307 ~~~~--~iv~~c~-~g~~~s~~~~~~L~~~----------G~~~v~~l~GG~~~w~~~g 352 (360)
.+++ .||+||. +|. |+..++..|.+. ||++|++|+||+.+|.++.
T Consensus 120 ~~~k~~~VVvyC~~SG~-Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~ 177 (216)
T 3op3_A 120 DTQKRIIIVFHCEFSSE-RGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEY 177 (216)
T ss_dssp STTSEEEEEEECCC--C-CHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTC
T ss_pred ccCCCCEEEEEeCCCCh-HHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhC
Confidence 1233 5999999 899 999999999886 8999999999999999875
No 42
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.73 E-value=4.5e-18 Score=154.24 Aligned_cols=122 Identities=11% Similarity=0.063 Sum_probs=88.5
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcC---------CccchhhccccccccccCCCcccCccCCCCCCCCC----hhhhh
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIR---------DNEEYVAESIIGSINIPLARIPDLESTDLGSMESS----PEMNI 303 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR---------~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~----~~~~~ 303 (360)
+.|+++++.+.++....+++++||||| ++.||..||||||+|+|++.+.+........+... ...+.
T Consensus 22 ~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 101 (302)
T 3olh_A 22 SMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAGR 101 (302)
T ss_dssp CEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHHHHH
T ss_pred CccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHHHHH
Confidence 679999999998311112489999999 77899999999999999987642211101111100 11222
Q ss_pred HHhcCCCeEEEEcCC--CchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCC
Q psy3426 304 LFNNKGSIIVIVGGE--DSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGI 358 (360)
Q Consensus 304 ~~~~~~~~iv~~c~~--g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~ 358 (360)
+...++++||+||++ |..+|.++++.|+..||++|++|+||+.+|+++|++++..
T Consensus 102 lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~ 158 (302)
T 3olh_A 102 LGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSG 158 (302)
T ss_dssp TTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCS
T ss_pred cCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccC
Confidence 233578899999964 2227999999999999999999999999999999988765
No 43
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.73 E-value=4e-18 Score=154.34 Aligned_cols=122 Identities=15% Similarity=0.134 Sum_probs=88.7
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcC--------CccchhhccccccccccCCCcccCccCCCCCCCCC-hh---hhhH
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIR--------DNEEYVAESIIGSINIPLARIPDLESTDLGSMESS-PE---MNIL 304 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR--------~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~-~~---~~~~ 304 (360)
+.|+++++.++++.....+++++|||| ++.||..||||||+|+|+..+.+........+... .. ...+
T Consensus 8 ~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~l 87 (296)
T 1rhs_A 8 ALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSL 87 (296)
T ss_dssp SEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHHT
T ss_pred ceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHHc
Confidence 579999999988210001579999999 57899999999999999987642110000000000 11 1122
Q ss_pred HhcCCCeEEEEcCC--CchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCC
Q psy3426 305 FNNKGSIIVIVGGE--DSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGI 358 (360)
Q Consensus 305 ~~~~~~~iv~~c~~--g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~ 358 (360)
...++++||+||.+ |...+.++++.|...||++|++|+||+.+|+++|++++..
T Consensus 88 gi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~ 143 (296)
T 1rhs_A 88 GISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSE 143 (296)
T ss_dssp TCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCS
T ss_pred CCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccC
Confidence 23567899999998 7613889999999999999999999999999999988764
No 44
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.72 E-value=1.3e-18 Score=156.84 Aligned_cols=116 Identities=16% Similarity=0.106 Sum_probs=87.8
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcC-CccchhhccccccccccCCCcccCccCCCCCCCCC-hhhhhHH---hcCCCe
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIR-DNEEYVAESIIGSINIPLARIPDLESTDLGSMESS-PEMNILF---NNKGSI 311 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR-~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~ 311 (360)
+.|+++++.+++ +++++++|||| ++.||..||||||+|+|+....... . ...+... .....+. ..++++
T Consensus 8 ~~is~~~l~~~l----~~~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~-~-~~~~~~~~~~~~~~~~~gi~~~~~ 81 (285)
T 1uar_A 8 VLVSTDWVQEHL----EDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDP-V-VRDFISEEEFAKLMERLGISNDTT 81 (285)
T ss_dssp GEECHHHHHTTT----TCTTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCS-S-SSSBCCHHHHHHHHHHTTCCTTCE
T ss_pred ceEcHHHHHHhc----CCCCEEEEEcCCCcchhhcCcCCCCEECCchhhccCC-c-ccCCCCHHHHHHHHHHcCCCCCCe
Confidence 479999999988 55689999999 6899999999999999987421000 0 0011000 1112222 356889
Q ss_pred EEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCC
Q psy3426 312 IVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGI 358 (360)
Q Consensus 312 iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~ 358 (360)
||+||++|..+|.++++.|...||++|++|+||+.+|+++|++++..
T Consensus 82 ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~ 128 (285)
T 1uar_A 82 VVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTE 128 (285)
T ss_dssp EEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCC
T ss_pred EEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCC
Confidence 99999987635889999999999999999999999999999988763
No 45
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.72 E-value=5.8e-18 Score=152.15 Aligned_cols=111 Identities=17% Similarity=0.249 Sum_probs=80.8
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccch-----------hhccccccccccCCCcccCccCCCCCCCCChhhh-hH
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEEY-----------VAESIIGSINIPLARIPDLESTDLGSMESSPEMN-IL 304 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~-----------~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~-~~ 304 (360)
..|+++++.+++ +++++++||||++.|| ..||||||+|+|+..+.. .+.+....... .+
T Consensus 152 ~~i~~~e~~~~~----~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~-----~~~~~~~~~l~~~~ 222 (280)
T 1urh_A 152 AVVKVTDVLLAS----HENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-----EGELKTTDELDAIF 222 (280)
T ss_dssp GBCCHHHHHHHH----HHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBS-----SSSBCCHHHHHHHH
T ss_pred cEEcHHHHHHHh----cCCCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhc-----CCccCCHHHHHHHH
Confidence 479999999988 3456899999999999 689999999999988751 11111111111 11
Q ss_pred ---HhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccccccc-CcccCCC
Q psy3426 305 ---FNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFEC-YGVLGPG 357 (360)
Q Consensus 305 ---~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~-~gl~~~~ 357 (360)
..+++++||+||.+|. ||..++..|...||++|++|+||+.+|.+ .|+|++.
T Consensus 223 ~~~~~~~~~~ivv~C~~G~-rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~ 278 (280)
T 1urh_A 223 FGRGVSYDKPIIVSCGSGV-TAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEP 278 (280)
T ss_dssp HTTTCCSSSCEEEECCSSS-THHHHHHHHHHTTCSSCEEECCSCCC-----------
T ss_pred HHcCCCCCCCEEEECChHH-HHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCcee
Confidence 2256789999999999 99999999999999999999999999987 5898765
No 46
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.71 E-value=2.2e-18 Score=142.49 Aligned_cols=121 Identities=12% Similarity=0.111 Sum_probs=84.6
Q ss_pred hhhhcccccccCHHHHHHHhhhcC---CCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHH
Q psy3426 229 NQALSEFCSSLSSTDLLDLINTRF---KKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILF 305 (360)
Q Consensus 229 ~~~~~~~~~~is~~~l~~~~~~~~---~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (360)
.......++.|+++++.++++.+. ..++++|||||+ .||..||||||+|+|+..+.. ....+. ...+.+.
T Consensus 23 ~~~~~~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~----~~~~l~--~l~~~~~ 95 (169)
T 3f4a_A 23 DSYSITNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQ----DPEYLR--ELKHRLL 95 (169)
T ss_dssp ---CCCSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHH----CHHHHH--HHHHHHH
T ss_pred hhcccCCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhc----ccccHH--HHHHHHH
Confidence 344555678999999999984321 124699999999 999999999999999987641 000010 0011111
Q ss_pred h-----cCCCeEEEEcCCC-chhHHHHHHHHHH----cC--CCcEEEecccccccccCcccCCC
Q psy3426 306 N-----NKGSIIVIVGGED-SMRQAKFARFIVR----LG--FPKVTYVHEHVNSFECYGVLGPG 357 (360)
Q Consensus 306 ~-----~~~~~iv~~c~~g-~~~s~~~~~~L~~----~G--~~~v~~l~GG~~~w~~~gl~~~~ 357 (360)
. .++++||+||.+| . |+..++..|.+ .| +.+|++|+||+.+|+++|.+.+.
T Consensus 96 ~~~~~~~~~~~IVvyC~sG~~-Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~ 158 (169)
T 3f4a_A 96 EKQADGRGALNVIFHCMLSQQ-RGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDES 158 (169)
T ss_dssp HHHHTSSSCEEEEEECSSSSS-HHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTT
T ss_pred hhcccccCCCeEEEEeCCCCC-cHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCccc
Confidence 1 1136899999987 6 88888877754 36 57899999999999999877654
No 47
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.71 E-value=4.9e-18 Score=153.79 Aligned_cols=113 Identities=14% Similarity=0.111 Sum_probs=89.7
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccch------------hhccccccccccCCCcccCccCCCCCCCCChhh-hh
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEEY------------VAESIIGSINIPLARIPDLESTDLGSMESSPEM-NI 303 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~------------~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~-~~ 303 (360)
..|+++++.+.+ +++++++||||++.|| ..||||||+|+|+.++.+ ..+.+...... +.
T Consensus 160 ~~i~~~e~~~~~----~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~----~~~~~~~~~~l~~~ 231 (296)
T 1rhs_A 160 LLKTYEQVLENL----ESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLT----EDGFEKSPEELRAM 231 (296)
T ss_dssp GEECHHHHHHHH----HHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBC----TTSCBCCHHHHHHH
T ss_pred eEEcHHHHHHHh----cCCCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcC----CCCcCCCHHHHHHH
Confidence 578999999988 3456899999999999 789999999999987741 11222111111 12
Q ss_pred HH---hcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccccccc-CcccCCCC
Q psy3426 304 LF---NNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFEC-YGVLGPGI 358 (360)
Q Consensus 304 ~~---~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~-~gl~~~~~ 358 (360)
+. .+++++||+||.+|. ||..++..|...||++|++|+||+.+|.+ .|++++..
T Consensus 232 ~~~~~~~~~~~ivv~C~sG~-rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~ 289 (296)
T 1rhs_A 232 FEAKKVDLTKPLIATCRKGV-TACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVS 289 (296)
T ss_dssp HHHTTCCTTSCEEEECSSSS-THHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEB
T ss_pred HHHcCCCCCCCEEEECCcHH-HHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccC
Confidence 22 256789999999999 99999999999999999999999999988 79887643
No 48
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.71 E-value=8.3e-18 Score=137.83 Aligned_cols=119 Identities=14% Similarity=0.077 Sum_probs=80.6
Q ss_pred cccccCHHHHHHHhhhcC----CCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCC---CC---hhhhhH
Q psy3426 235 FCSSLSSTDLLDLINTRF----KKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSME---SS---PEMNIL 304 (360)
Q Consensus 235 ~~~~is~~~l~~~~~~~~----~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~---~~---~~~~~~ 304 (360)
.+..|+++++.++++.+. .++++++||||++.||..||||||+|+|+..+........+.+. .. .....+
T Consensus 9 ~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (158)
T 3tg1_B 9 SIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSF 88 (158)
T ss_dssp --CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHTCCCCSSCSS
T ss_pred CCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhcCCHHHHHHH
Confidence 457899999999982100 03568999999999999999999999999975200000111110 00 000111
Q ss_pred HhcCCCeEEEEcCCCc--------hhHHHHHHHHHHcCCCcEEEecccccccccCccc
Q psy3426 305 FNNKGSIIVIVGGEDS--------MRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVL 354 (360)
Q Consensus 305 ~~~~~~~iv~~c~~g~--------~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~ 354 (360)
...++++||+||.+|. .++..++..|.+.|| +|++|+||+.+|.++.-.
T Consensus 89 ~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~~p~ 145 (158)
T 3tg1_B 89 KRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHEN 145 (158)
T ss_dssp TTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSSCGG
T ss_pred hccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHHhhh
Confidence 1224779999999994 158999999999999 699999999999887543
No 49
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.71 E-value=5.3e-18 Score=165.79 Aligned_cols=106 Identities=13% Similarity=0.220 Sum_probs=90.5
Q ss_pred ccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEE
Q psy3426 236 CSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIV 315 (360)
Q Consensus 236 ~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 315 (360)
.+.|+++++.++++ +++++++||||++.||..||||||+|+|++.+. .....+...++++||+|
T Consensus 6 ~~~is~~~l~~~l~---~~~~~~liDvR~~~e~~~ghIpgAv~ip~~~~~-------------~~~~~l~~~~~~~iVvy 69 (539)
T 1yt8_A 6 IAVRTFHDIRAALL---ARRELALLDVREEDPFAQAHPLFAANLPLSRLE-------------LEIHARVPRRDTPITVY 69 (539)
T ss_dssp CEEECHHHHHHHHH---HTCCBEEEECSCHHHHTTSBCTTCEECCGGGHH-------------HHHHHHSCCTTSCEEEE
T ss_pred CcccCHHHHHHHHh---CCCCeEEEECCCHHHHhcCcCCCCEECCHHHHH-------------HHHHhhCCCCCCeEEEE
Confidence 56899999999882 234789999999999999999999999998664 11223333468899999
Q ss_pred cCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCC
Q psy3426 316 GGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGI 358 (360)
Q Consensus 316 c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~ 358 (360)
|.+|. +|.++++.|.+.||++|++|+||+.+|+++|++++..
T Consensus 70 c~~g~-~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~ 111 (539)
T 1yt8_A 70 DDGEG-LAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRD 111 (539)
T ss_dssp CSSSS-HHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCS
T ss_pred ECCCC-hHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccC
Confidence 99999 9999999999999999999999999999999998654
No 50
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.70 E-value=1.5e-17 Score=149.19 Aligned_cols=111 Identities=18% Similarity=0.228 Sum_probs=86.4
Q ss_pred ccCHHHHHHHhhhcCCCCCEEEEEcCCccchhh----------------ccccccccccCCCcccCccCCCCCCCCChh-
Q psy3426 238 SLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVA----------------ESIIGSINIPLARIPDLESTDLGSMESSPE- 300 (360)
Q Consensus 238 ~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~----------------ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~- 300 (360)
.++++++.+.+ .+.+ +||||++.||.. ||||||+|+|+..+. ...+.+.....
T Consensus 145 ~~~~~el~~~~----~~~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~----~~~~~~~~~~~l 214 (277)
T 3aay_A 145 RAFRDEVLAAI----NVKN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAA----NEDGTFKSDEEL 214 (277)
T ss_dssp EECHHHHHHTT----TTSE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGB----CTTSCBCCHHHH
T ss_pred hcCHHHHHHhc----CCCC--EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhc----CCCCcCCCHHHH
Confidence 47899999888 4444 999999999986 999999999988653 11122221111
Q ss_pred hhhH---HhcCCCeEEEEcCCCchhHHHHHHHHHH-cCCCcEEEeccccccccc-CcccCCCCC
Q psy3426 301 MNIL---FNNKGSIIVIVGGEDSMRQAKFARFIVR-LGFPKVTYVHEHVNSFEC-YGVLGPGIP 359 (360)
Q Consensus 301 ~~~~---~~~~~~~iv~~c~~g~~~s~~~~~~L~~-~G~~~v~~l~GG~~~w~~-~gl~~~~~~ 359 (360)
.+.+ ..+++++||+||.+|. +|..++..|.+ .||++|++|+||+.+|.+ +|++++.++
T Consensus 215 ~~~~~~~~~~~~~~iv~yC~~G~-rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g~ 277 (277)
T 3aay_A 215 AKLYADAGLDNSKETIAYCRIGE-RSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELGS 277 (277)
T ss_dssp HHHHHHHTCCTTSCEEEECSSHH-HHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCCC
T ss_pred HHHHHHcCCCCCCCEEEEcCcHH-HHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccCC
Confidence 1222 2356889999999999 99999999986 899999999999999999 999988653
No 51
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.70 E-value=2.1e-17 Score=148.88 Aligned_cols=117 Identities=25% Similarity=0.256 Sum_probs=89.3
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccchh----------------hccccccccccCCCcccCccCCCCCCCCChh
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYV----------------AESIIGSINIPLARIPDLESTDLGSMESSPE 300 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~----------------~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~ 300 (360)
..|+++++.+.++.. ...+..+||||++.||. .||||||+|+|+..+.+ ..+.+.....
T Consensus 146 ~~i~~~el~~~l~~~-~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~----~~~~~~~~~~ 220 (285)
T 1uar_A 146 IRAYRDDVLEHIIKV-KEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVN----PDGTFKSAEE 220 (285)
T ss_dssp GEECHHHHHHHHHHH-HTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBC----TTSCBCCHHH
T ss_pred eEEcHHHHHHHHhhc-ccCCCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcC----CCCcCCCHHH
Confidence 468999999887200 01334799999999997 79999999999987641 1122211111
Q ss_pred -hhhHH---hcCCCeEEEEcCCCchhHHHHHHHHH-HcCCCcEEEecccccccc-cCcccCCCCC
Q psy3426 301 -MNILF---NNKGSIIVIVGGEDSMRQAKFARFIV-RLGFPKVTYVHEHVNSFE-CYGVLGPGIP 359 (360)
Q Consensus 301 -~~~~~---~~~~~~iv~~c~~g~~~s~~~~~~L~-~~G~~~v~~l~GG~~~w~-~~gl~~~~~~ 359 (360)
...+. .+++++||+||.+|. +|..+++.|. ..||++|++|+||+.+|. .+|++++..+
T Consensus 221 l~~~~~~~g~~~~~~ivvyC~~G~-rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g~ 284 (285)
T 1uar_A 221 LRALYEPLGITKDKDIVVYCRIAE-RSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGE 284 (285)
T ss_dssp HHHHHGGGTCCTTSEEEEECSSHH-HHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCSC
T ss_pred HHHHHHHcCCCCCCCEEEECCchH-HHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccCC
Confidence 12222 356789999999999 9999999999 899999999999999998 8999998765
No 52
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.70 E-value=2.8e-18 Score=155.60 Aligned_cols=110 Identities=16% Similarity=0.164 Sum_probs=87.8
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccch-----------hhccccccccccCCCcccCccCCCCCCCCChh-hhhH
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEEY-----------VAESIIGSINIPLARIPDLESTDLGSMESSPE-MNIL 304 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~-----------~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~-~~~~ 304 (360)
..++++++.+.+ +++++++||||++.|| ..||||||+|+|+.++.+ ..+.+..... .+.+
T Consensus 175 ~~i~~~e~~~~~----~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~----~~~~~~~~~~l~~~~ 246 (302)
T 3olh_A 175 FIKTYEDIKENL----ESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLS----QEGLEKSPEEIRHLF 246 (302)
T ss_dssp GEECHHHHHHHH----HHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBC----SSSCBCCHHHHHHHH
T ss_pred ceecHHHHHHhh----cCCCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcC----CCCccCCHHHHHHHH
Confidence 468999999888 4567899999999999 789999999999987741 1122211111 1222
Q ss_pred ---HhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccC
Q psy3426 305 ---FNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLG 355 (360)
Q Consensus 305 ---~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~ 355 (360)
..+++++||+||.+|. ||..++..|...||++|++|+||+.+|.++|++.
T Consensus 247 ~~~~~~~~~~iv~yC~sG~-rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 247 QEKKVDLSKPLVATCGSGV-TACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp HHTTCCTTSCEEEECSSSS-TTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred HhcCCCCCCCEEEECCChH-HHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence 2346789999999999 9999999999999999999999999999999875
No 53
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.68 E-value=1.4e-17 Score=160.67 Aligned_cols=103 Identities=13% Similarity=0.226 Sum_probs=89.4
Q ss_pred cccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEE
Q psy3426 235 FCSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVI 314 (360)
Q Consensus 235 ~~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 314 (360)
..+.++++++.+.+ .+++.++||+|++.||..||||||+|+|+.++. ..+ . ..+++++||+
T Consensus 372 ~~~~i~~~~l~~~~----~~~~~~lvDvR~~~e~~~ghIpgA~~ip~~~l~-------~~~------~--~l~~~~~vvv 432 (474)
T 3tp9_A 372 SYANVSPDEVRGAL----AQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKLA-------AHI------H--DVPRDGSVCV 432 (474)
T ss_dssp CCEEECHHHHHHTT----TTTCCEEEECSCHHHHHHCBCTTCEECCHHHHT-------TTG------G--GSCSSSCEEE
T ss_pred cccccCHHHHHHHh----cCCCcEEEECCCHHHHhcCcCCCCEECCHHHHH-------HHH------h--cCCCCCEEEE
Confidence 35689999999988 557899999999999999999999999998764 111 1 1246789999
Q ss_pred EcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCC
Q psy3426 315 VGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPG 357 (360)
Q Consensus 315 ~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~ 357 (360)
||.+|. +|..++..|...||++|++|+||+.+|.++|++++.
T Consensus 433 ~C~~G~-ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 433 YCRTGG-RSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp ECSSSH-HHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred ECCCCH-HHHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence 999999 999999999999999999999999999999998763
No 54
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.68 E-value=1.3e-17 Score=155.21 Aligned_cols=114 Identities=11% Similarity=0.073 Sum_probs=85.4
Q ss_pred ccccCHHHHHHHhhhcCCCCCEEEEEcCC--------ccchhhccccccccccCCC-cccCccCCCCCCCCCh-------
Q psy3426 236 CSSLSSTDLLDLINTRFKKPKVLVIDIRD--------NEEYVAESIIGSINIPLAR-IPDLESTDLGSMESSP------- 299 (360)
Q Consensus 236 ~~~is~~~l~~~~~~~~~~~~~~iiDvR~--------~~e~~~ghIpgA~~i~~~~-~~~~~~~~~~~~~~~~------- 299 (360)
.+.|+++++.+++ ++ ++|||||+ +.||..||||||+|+|+.. +.+... ........+
T Consensus 13 ~~~Is~~el~~~l----~~--~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~-~~~~~~~lp~~~~f~~ 85 (373)
T 1okg_A 13 KVFLDPSEVADHL----AE--YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVP-TSTARHPLPPXAEFID 85 (373)
T ss_dssp CCEECHHHHTTCG----GG--SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCT-TCCCSSCCCCHHHHHH
T ss_pred CcEEcHHHHHHHc----CC--cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccc-cCCccccCCCHHHHHH
Confidence 3689999999888 33 89999998 5899999999999999986 641100 000001111
Q ss_pred hhhhHHhcCCCeEEEEc-CCCchhHH-HHHHHHHHcCCCcEEEecccccccccCcccCCCC
Q psy3426 300 EMNILFNNKGSIIVIVG-GEDSMRQA-KFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGI 358 (360)
Q Consensus 300 ~~~~~~~~~~~~iv~~c-~~g~~~s~-~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~ 358 (360)
..+.+...++++||+|| .+|. +++ ++++.|+..|| +|++|+||+.+|+++|++++..
T Consensus 86 ~l~~~gi~~d~~VVvYc~~~G~-rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~ 144 (373)
T 1okg_A 86 WCMANGMAGELPVLCYDDECGA-MGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESG 144 (373)
T ss_dssp HHHHTTCSSSSCEEEECSSTTT-TTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECS
T ss_pred HHHHcCCCCCCeEEEEeCCCCc-hHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccC
Confidence 11222335688999999 6676 675 99999999999 9999999999999999987654
No 55
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.68 E-value=3.5e-17 Score=149.41 Aligned_cols=112 Identities=20% Similarity=0.245 Sum_probs=87.8
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccchhh----------------ccccccccccCCCcccCccCCCCCCCCChh
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVA----------------ESIIGSINIPLARIPDLESTDLGSMESSPE 300 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~----------------ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~ 300 (360)
..++++++.+.+ ++. ++||||++.||.. ||||||+|+|+..+. ..++.+.....
T Consensus 179 ~~i~~~el~~~l----~~~--~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~----~~~g~~~~~~~ 248 (318)
T 3hzu_A 179 IRAFRDDVLAIL----GAQ--PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAA----DESGRFRSREE 248 (318)
T ss_dssp TBCCHHHHHHHT----TTS--CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGB----CTTSCBCCHHH
T ss_pred ccccHHHHHHhh----cCC--eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhc----CCCCcCCCHHH
Confidence 368899999988 333 8999999999998 999999999998764 12222221111
Q ss_pred h-hhH-HhcCCCeEEEEcCCCchhHHHHHHHHHH-cCCCcEEEecccccccc-cCcccCCCCC
Q psy3426 301 M-NIL-FNNKGSIIVIVGGEDSMRQAKFARFIVR-LGFPKVTYVHEHVNSFE-CYGVLGPGIP 359 (360)
Q Consensus 301 ~-~~~-~~~~~~~iv~~c~~g~~~s~~~~~~L~~-~G~~~v~~l~GG~~~w~-~~gl~~~~~~ 359 (360)
. +.+ ...++++||+||.+|. ||..++..|.+ .||++|++|+||+.+|. ..|++++.++
T Consensus 249 l~~~~~~l~~~~~ivvyC~sG~-rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~ 310 (318)
T 3hzu_A 249 LERLYDFINPDDQTVVYCRIGE-RSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGE 310 (318)
T ss_dssp HHHHTTTCCTTCCCEEECSSSH-HHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSS
T ss_pred HHHHhcCCCCCCcEEEEcCChH-HHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence 1 111 2246789999999999 99999999997 89999999999999999 4799988764
No 56
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.67 E-value=1e-17 Score=136.76 Aligned_cols=114 Identities=17% Similarity=0.253 Sum_probs=77.6
Q ss_pred ccccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcc--cCccC--CC-CCCCCChhhhhH-Hhc
Q psy3426 234 EFCSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIP--DLEST--DL-GSMESSPEMNIL-FNN 307 (360)
Q Consensus 234 ~~~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~--~~~~~--~~-~~~~~~~~~~~~-~~~ 307 (360)
.....|+++++.++++. ...++++||||++.||..||||||+|+|+..+. +.... .. ..+........+ ...
T Consensus 13 ~~~~~is~~~l~~~l~~--~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 90 (154)
T 1hzm_A 13 EMAISKTVAWLNEQLEL--GNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRC 90 (154)
T ss_dssp CCSSBSCCCCHHHHHHH--CSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHHST
T ss_pred ccccccCHHHHHHHHhC--CCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHhccC
Confidence 34678999999988831 113789999999999999999999999998642 00000 00 011000011122 224
Q ss_pred CCCeEEEEcCCCchhH-------HHHHHHHHHc---CCCcEEEecccccccccC
Q psy3426 308 KGSIIVIVGGEDSMRQ-------AKFARFIVRL---GFPKVTYVHEHVNSFECY 351 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s-------~~~~~~L~~~---G~~~v~~l~GG~~~w~~~ 351 (360)
++++||+||.+|. ++ .++++.|... ||+ |++|+||+.+|.++
T Consensus 91 ~~~~iVvyc~~g~-~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 91 GTDTVVLYDESSS-DWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp TSSCEEECCCSSS-SSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred CCCeEEEEeCCCC-ccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 5789999999987 54 4446666654 998 99999999999875
No 57
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.67 E-value=3.3e-17 Score=142.85 Aligned_cols=99 Identities=19% Similarity=0.174 Sum_probs=81.5
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccchhh----------ccccccccccCCCcccCccCCCCCCCCChhhhhHHh
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVA----------ESIIGSINIPLARIPDLESTDLGSMESSPEMNILFN 306 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~----------ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (360)
..++++++.+ ++++||||++.||.+ ||||||+|+|+..+. ... ........
T Consensus 121 ~~i~~~e~~~---------~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~------~~~----e~~~~~~~ 181 (230)
T 2eg4_A 121 WLLTADEAAR---------HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFL------SPE----GLLERLGL 181 (230)
T ss_dssp GBCCHHHHHT---------CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGG------CCT----THHHHHTC
T ss_pred ceeCHHHHhh---------CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhC------ChH----HHHHhcCC
Confidence 4677777653 568999999999999 999999999998774 110 01122234
Q ss_pred cCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCC
Q psy3426 307 NKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGP 356 (360)
Q Consensus 307 ~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~ 356 (360)
+++++||+||.+|. +|..++..|.+.| .+|++|+||+.+|.++|++++
T Consensus 182 ~~~~~iv~~C~~G~-rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~ 229 (230)
T 2eg4_A 182 QPGQEVGVYCHSGA-RSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTE 229 (230)
T ss_dssp CTTCEEEEECSSSH-HHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCB
T ss_pred CCCCCEEEEcCChH-HHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCC
Confidence 56889999999999 9999999999999 999999999999999999876
No 58
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.67 E-value=5.1e-17 Score=158.84 Aligned_cols=102 Identities=15% Similarity=0.153 Sum_probs=90.4
Q ss_pred ccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhH-HhcCCCeEEE
Q psy3426 236 CSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNIL-FNNKGSIIVI 314 (360)
Q Consensus 236 ~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~iv~ 314 (360)
...|+++++.+++ .+++.++||||++.||..||||||+|+|...+. ..+ ..+++++||+
T Consensus 376 ~~~i~~~~l~~~l----~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~----------------~~l~~l~~~~~ivv 435 (539)
T 1yt8_A 376 ADTIDPTTLADWL----GEPGTRVLDFTASANYAKRHIPGAAWVLRSQLK----------------QALERLGTAERYVL 435 (539)
T ss_dssp CCEECHHHHHHHT----TSTTEEEEECSCHHHHHHCBCTTCEECCGGGHH----------------HHHHHHCCCSEEEE
T ss_pred CCccCHHHHHHHh----cCCCeEEEEeCCHHHhhcCcCCCchhCCHHHHH----------------HHHHhCCCCCeEEE
Confidence 4679999999998 567899999999999999999999999988764 122 2356789999
Q ss_pred EcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCC
Q psy3426 315 VGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGI 358 (360)
Q Consensus 315 ~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~ 358 (360)
||.+|. +|..++..|...||++|++|+||+.+|.++|++++..
T Consensus 436 ~C~sG~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~~ 478 (539)
T 1yt8_A 436 TCGSSL-LARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDG 478 (539)
T ss_dssp ECSSSH-HHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBCS
T ss_pred EeCCCh-HHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCCcccC
Confidence 999999 9999999999999999999999999999999998864
No 59
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.64 E-value=1.5e-16 Score=151.05 Aligned_cols=118 Identities=15% Similarity=0.117 Sum_probs=89.7
Q ss_pred cccCHHHHHHHhhhcC----CCCCEEEEEcC--CccchhhccccccccccCCCcccCccCCCCCCCCChh-hhhH---Hh
Q psy3426 237 SSLSSTDLLDLINTRF----KKPKVLVIDIR--DNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPE-MNIL---FN 306 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~----~~~~~~iiDvR--~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~-~~~~---~~ 306 (360)
..++++++.+++.... .++++++||+| ++.||..||||||+|+|+..+... ....+..... .+.+ ..
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~---~~~~~~~~~~l~~~~~~~gi 200 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESE---PLWNKVSDEQLKAMLAKHGI 200 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEET---TTTEECCHHHHHHHHHHTTC
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccC---CCCCCCCHHHHHHHHHHcCC
Confidence 4678888888872110 03578999999 999999999999999999876410 1111211111 1222 22
Q ss_pred cCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCC
Q psy3426 307 NKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGI 358 (360)
Q Consensus 307 ~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~ 358 (360)
+++++||+||.+|. +|..+++.|...||++|++|+||+.+|.++|++++.+
T Consensus 201 ~~~~~ivvyC~~G~-~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g 251 (423)
T 2wlr_A 201 RHDTTVILYGRDVY-AAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERG 251 (423)
T ss_dssp CTTSEEEEECSSHH-HHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCS
T ss_pred CCCCeEEEECCCch-HHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccC
Confidence 46789999999998 9999999999999999999999999999999988763
No 60
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.64 E-value=1.4e-16 Score=151.36 Aligned_cols=118 Identities=12% Similarity=0.063 Sum_probs=88.5
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccch-----------hhccccccccccCCC--cccCcc-CCCCCCCCChh-h
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEEY-----------VAESIIGSINIPLAR--IPDLES-TDLGSMESSPE-M 301 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~-----------~~ghIpgA~~i~~~~--~~~~~~-~~~~~~~~~~~-~ 301 (360)
..|+++++.+.+ +.++.++||||++.|| ..||||||+|+|+.. +.-... ...+.+..... .
T Consensus 272 ~~i~~~e~~~~l----~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~ 347 (423)
T 2wlr_A 272 LMLDMEQARGLL----HRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDIT 347 (423)
T ss_dssp GEECHHHHHTTT----TCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHH
T ss_pred heecHHHHHHHh----cCCCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHHH
Confidence 358899999888 5577999999999999 789999999999862 110000 01111211111 1
Q ss_pred hhH---HhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccccccc-CcccCCCCC
Q psy3426 302 NIL---FNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFEC-YGVLGPGIP 359 (360)
Q Consensus 302 ~~~---~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~-~gl~~~~~~ 359 (360)
+.+ ..+++++||+||.+|. ||..++..|...||++|++|+||+.+|.+ .|++++..+
T Consensus 348 ~~~~~~~~~~~~~ivvyC~sG~-rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~~ 408 (423)
T 2wlr_A 348 AMWKAWNIKPEQQVSFYCGTGW-RASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGE 408 (423)
T ss_dssp HHHHTTTCCTTSEEEEECSSSH-HHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEECSS
T ss_pred HHHHHcCCCCCCcEEEECCcHH-HHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcccCC
Confidence 222 2246789999999999 99999999999999999999999999998 898887543
No 61
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.62 E-value=7.8e-16 Score=125.85 Aligned_cols=115 Identities=10% Similarity=0.135 Sum_probs=75.7
Q ss_pred cccccCHHHHHHHhhhcCCCC--CEEEEEcCCccchhhccccccccccCCCcccCccCC--CCCCCCChhhhhHHhc-CC
Q psy3426 235 FCSSLSSTDLLDLINTRFKKP--KVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTD--LGSMESSPEMNILFNN-KG 309 (360)
Q Consensus 235 ~~~~is~~~l~~~~~~~~~~~--~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~ 309 (360)
....|+++++.+++ ++. ++++||||++.||+.||||||+|+|...+....... ...+.. .....+... +.
T Consensus 13 ~~~~i~~~~l~~~l----~~~~~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~-~~~~~~~~~~~~ 87 (157)
T 1whb_A 13 EKGAITAKELYTMM----TDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPD-DSKDTWKKRGNV 87 (157)
T ss_dssp CCSEECHHHHHHHH----TCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCT-THHHHHHGGGTS
T ss_pred cCCccCHHHHHHHH----hcCCCCeEEEECCCHHHHHhccccCCcccCHHHccCCCcHHHHHHHCCh-HHHHHHHhcCCC
Confidence 35689999999998 444 799999999999999999999999998663110000 000100 001111111 24
Q ss_pred CeEEEEcCCCch---hHHHHHHHHHH----c----CCCc-EEEecccccccccCcccC
Q psy3426 310 SIIVIVGGEDSM---RQAKFARFIVR----L----GFPK-VTYVHEHVNSFECYGVLG 355 (360)
Q Consensus 310 ~~iv~~c~~g~~---~s~~~~~~L~~----~----G~~~-v~~l~GG~~~w~~~gl~~ 355 (360)
+.||+||.++.. ++..+++.|.+ . |+.+ |++|+|||.+|++. ++.
T Consensus 88 ~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~ 144 (157)
T 1whb_A 88 EYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQ 144 (157)
T ss_dssp SEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGG
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-Chh
Confidence 569999988762 24556666662 2 4543 99999999999875 543
No 62
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.59 E-value=8.1e-16 Score=125.65 Aligned_cols=114 Identities=11% Similarity=0.180 Sum_probs=73.4
Q ss_pred ccccccCHHHHHHHhhhcCCCC--CEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCC-CChh-h-hhHHhc-
Q psy3426 234 EFCSSLSSTDLLDLINTRFKKP--KVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSME-SSPE-M-NILFNN- 307 (360)
Q Consensus 234 ~~~~~is~~~l~~~~~~~~~~~--~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~-~~~~-~-~~~~~~- 307 (360)
.....|+++++.+++ +++ ++++||||++.||+.||||||+|+|...+..... ...+. ..+. . ..+...
T Consensus 17 ~~~~~is~~~l~~~l----~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~~--~~~l~~~lp~~~~~l~~~~~ 90 (157)
T 2gwf_A 17 RGSGAITAKELYTMM----TDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVT--ASWIEAHLPDDSKDTWKKRG 90 (157)
T ss_dssp --CCEECHHHHHHHH----HSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCC--HHHHHHTSCHHHHHHHHTTT
T ss_pred CCCCccCHHHHHHHH----hcCCCCeEEEECCCHHHHHhcCccCCcccCHHHcCCCCc--HHHHHHHcCHHHHHHHHhcC
Confidence 345789999999988 333 7999999999999999999999999876531000 00000 0010 1 111111
Q ss_pred CCCeEEEEcCCCch---hHHHHHHHHH----Hc----CCCc-EEEecccccccccCccc
Q psy3426 308 KGSIIVIVGGEDSM---RQAKFARFIV----RL----GFPK-VTYVHEHVNSFECYGVL 354 (360)
Q Consensus 308 ~~~~iv~~c~~g~~---~s~~~~~~L~----~~----G~~~-v~~l~GG~~~w~~~gl~ 354 (360)
+.+.||+||.++.. ++..+++.|. +. |+.+ |++|+|||.+|++. ++
T Consensus 91 ~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p 148 (157)
T 2gwf_A 91 NVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YP 148 (157)
T ss_dssp TSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CG
T ss_pred CCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-Ch
Confidence 23468999988762 2344556654 22 4543 99999999999874 44
No 63
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.58 E-value=8.4e-16 Score=151.53 Aligned_cols=95 Identities=18% Similarity=0.279 Sum_probs=77.7
Q ss_pred cccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEE
Q psy3426 235 FCSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVI 314 (360)
Q Consensus 235 ~~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 314 (360)
..+.|+++++.++ ++++++||||++.||+.||||||+|+|++++. ..+ .. .+++++||+
T Consensus 471 ~~~~i~~~~~~~~------~~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~-------~~~------~~--~~~~~~iv~ 529 (565)
T 3ntd_A 471 DATPIHFDQIDNL------SEDQLLLDVRNPGELQNGGLEGAVNIPVDELR-------DRM------HE--LPKDKEIII 529 (565)
T ss_dssp SCCEECTTTTTSC------CTTEEEEECSCGGGGGGCCCTTCEECCGGGTT-------TSG------GG--SCTTSEEEE
T ss_pred ccceeeHHHHHhC------CCCcEEEEeCCHHHHhcCCCCCcEECCHHHHH-------HHH------hh--cCCcCeEEE
Confidence 3445555554432 46789999999999999999999999998774 111 11 246789999
Q ss_pred EcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCc
Q psy3426 315 VGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYG 352 (360)
Q Consensus 315 ~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~g 352 (360)
||.+|. ||..+++.|.+.|| +|++|+||+.+|+++|
T Consensus 530 ~c~~g~-rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 530 FSQVGL-RGNVAYRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp ECSSSH-HHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred EeCCch-HHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 999999 99999999999999 9999999999999886
No 64
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.57 E-value=6.2e-15 Score=133.90 Aligned_cols=123 Identities=19% Similarity=0.249 Sum_probs=90.3
Q ss_pred ccccccCHHHHHHHhhhcCCCCCEEEEEcC--------Cc-cch-hhccccccccccCCCcccCccCCCCCCC----CCh
Q psy3426 234 EFCSSLSSTDLLDLINTRFKKPKVLVIDIR--------DN-EEY-VAESIIGSINIPLARIPDLESTDLGSME----SSP 299 (360)
Q Consensus 234 ~~~~~is~~~l~~~~~~~~~~~~~~iiDvR--------~~-~e~-~~ghIpgA~~i~~~~~~~~~~~~~~~~~----~~~ 299 (360)
..++.|||+++.+++..+ ...++++||++ +. .|| ++||||||++++++.+.+..+--...+. +..
T Consensus 25 ~~~~LIsp~~l~~ll~~~-~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~ 103 (327)
T 3utn_X 25 PLFDLISPKAFVKLVASE-KVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDD 103 (327)
T ss_dssp CSCEEECHHHHHHHHHHC-SSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHH
T ss_pred ccccccCHHHHHHHHhCC-CCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHH
Confidence 455689999999998533 24569999996 22 366 7899999999999876532221000111 112
Q ss_pred hhhhHHhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCC
Q psy3426 300 EMNILFNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGI 358 (360)
Q Consensus 300 ~~~~~~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~ 358 (360)
..+.+...++++||+|++.+...|++++|.|+..|+++|++|+|| .+|+++|++++..
T Consensus 104 ~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~ 161 (327)
T 3utn_X 104 AMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSS 161 (327)
T ss_dssp HHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCC
T ss_pred HHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccC
Confidence 234444557889999998876579999999999999999999988 8999999988653
No 65
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.57 E-value=9.2e-16 Score=151.92 Aligned_cols=100 Identities=21% Similarity=0.271 Sum_probs=84.4
Q ss_pred hhcccccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCC
Q psy3426 231 ALSEFCSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGS 310 (360)
Q Consensus 231 ~~~~~~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (360)
......+.|+++++.+++ + ++.++||||++.||+.||||||+|+|++.+. ..+ .. .++++
T Consensus 483 ~~~~~~~~i~~~~~~~~~----~-~~~~~iDvR~~~e~~~ghi~ga~~ip~~~l~-------~~~------~~--l~~~~ 542 (588)
T 3ics_A 483 IVDGFVDTVQWHEIDRIV----E-NGGYLIDVREPNELKQGMIKGSINIPLDELR-------DRL------EE--VPVDK 542 (588)
T ss_dssp HHTTSCCEECTTTHHHHH----H-TTCEEEECSCGGGGGGCBCTTEEECCHHHHT-------TCG------GG--SCSSS
T ss_pred ccccccceecHHHHHHHh----c-CCCEEEEcCCHHHHhcCCCCCCEECCHHHHH-------HHH------hh--CCCCC
Confidence 445567889999999988 2 4589999999999999999999999998764 111 11 24678
Q ss_pred eEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCc
Q psy3426 311 IIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYG 352 (360)
Q Consensus 311 ~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~g 352 (360)
+||+||.+|. ||..+++.|.+.||+ |++|+||+.+|+++.
T Consensus 543 ~iv~~C~~g~-rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~~ 582 (588)
T 3ics_A 543 DIYITCQLGM-RGYVAARMLMEKGYK-VKNVDGGFKLYGTVL 582 (588)
T ss_dssp CEEEECSSSH-HHHHHHHHHHHTTCC-EEEETTHHHHHHHHC
T ss_pred eEEEECCCCc-HHHHHHHHHHHcCCc-EEEEcchHHHHHhhh
Confidence 9999999999 999999999999999 999999999998764
No 66
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.56 E-value=3.1e-15 Score=144.20 Aligned_cols=107 Identities=13% Similarity=0.122 Sum_probs=87.0
Q ss_pred hcccccccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCe
Q psy3426 232 LSEFCSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSI 311 (360)
Q Consensus 232 ~~~~~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (360)
.....+.|+++++.+++ .+ + ++||+|++.+|..||||||+|+|.+... ....+.+. .++++
T Consensus 268 ~~~~~~~is~~~l~~~l----~~-~-~iiD~R~~~~y~~ghIpGA~~i~~~~~~------------~~~~~~l~-~~~~~ 328 (474)
T 3tp9_A 268 GAPERVDLPPERVRAWR----EG-G-VVLDVRPADAFAKRHLAGSLNIPWNKSF------------VTWAGWLL-PADRP 328 (474)
T ss_dssp CCCEECCCCGGGHHHHH----HT-S-EEEECSCHHHHHHSEETTCEECCSSTTH------------HHHHHHHC-CSSSC
T ss_pred ccCCCceeCHHHHHHHh----CC-C-EEEECCChHHHhccCCCCeEEECcchHH------------HHHHHhcC-CCCCe
Confidence 35567899999999998 33 4 9999999999999999999999987421 02233443 56789
Q ss_pred EEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcccCCCCC
Q psy3426 312 IVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVLGPGIP 359 (360)
Q Consensus 312 iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~~~~~ 359 (360)
||+||+.+. +.++++.|...||++|+++.+|+.+|+++|.++...+
T Consensus 329 vvvy~~~~~--~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~~ 374 (474)
T 3tp9_A 329 IHLLAADAI--APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYA 374 (474)
T ss_dssp EEEECCTTT--HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECCE
T ss_pred EEEEECCCc--HHHHHHHHHHcCCcceEEecCcHHHHHhccccccccc
Confidence 999999877 6669999999999999997779999999998776543
No 67
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.53 E-value=7e-15 Score=128.06 Aligned_cols=92 Identities=18% Similarity=0.175 Sum_probs=67.4
Q ss_pred CCCCEEEEEcCCccchhhccccccccccCC--CcccCccCCCCCCCCC----hhhhhHHh-cCCCeEEEEcCCCchhHHH
Q psy3426 253 KKPKVLVIDIRDNEEYVAESIIGSINIPLA--RIPDLESTDLGSMESS----PEMNILFN-NKGSIIVIVGGEDSMRQAK 325 (360)
Q Consensus 253 ~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~--~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~iv~~c~~g~~~s~~ 325 (360)
.++++++||||++.||..||||||+|+|+. .+. ........ .....+.. ..+++||+||.+|..+|.+
T Consensus 3 ~~~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyc~~g~~~s~~ 77 (230)
T 2eg4_A 3 LPEDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLR-----LREEAELKALEGGLTELFQTLGLRSPVVLYDEGLTSRLCR 77 (230)
T ss_dssp CCTTCEEEECSCHHHHHHCBCTTCEECCCCSCCCC-----CCSHHHHHHHHHHHHHHHHHTTCCSSEEEECSSSCHHHHH
T ss_pred CCCCEEEEECCChhhHhhCcCCCCEECCccchhcc-----cCCCCCcCCCHHHHHHHHHhcCCCCEEEEEcCCCCccHHH
Confidence 356789999999999999999999999998 442 00000000 00111111 1268999999987657899
Q ss_pred HHHHHHHcCCCcEEEecccccccccCcccC
Q psy3426 326 FARFIVRLGFPKVTYVHEHVNSFECYGVLG 355 (360)
Q Consensus 326 ~~~~L~~~G~~~v~~l~GG~~~w~~~gl~~ 355 (360)
+++.|. .||++|++|+|| |++ +++
T Consensus 78 a~~~L~-~G~~~v~~l~GG---W~~--~p~ 101 (230)
T 2eg4_A 78 TAFFLG-LGGLEVQLWTEG---WEP--YAT 101 (230)
T ss_dssp HHHHHH-HTTCCEEEECSS---CGG--GCC
T ss_pred HHHHHH-cCCceEEEeCCC---Ccc--Ccc
Confidence 999999 999999999999 977 555
No 68
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.51 E-value=1.3e-15 Score=146.25 Aligned_cols=82 Identities=13% Similarity=0.256 Sum_probs=0.0
Q ss_pred CCCCEEEEEcCCccchhhccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEEcCCCchhHHHHHHHHHH
Q psy3426 253 KKPKVLVIDIRDNEEYVAESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIVGGEDSMRQAKFARFIVR 332 (360)
Q Consensus 253 ~~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~~s~~~~~~L~~ 332 (360)
+++++++||||++.||..||||||+|+|+.++. ..+ .. .+++++||+||.+|. ||..+++.|.+
T Consensus 384 ~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~-------~~~------~~--l~~~~~iv~~C~~G~-rs~~a~~~L~~ 447 (466)
T 3r2u_A 384 TGNESHILDVRNDNEWNNGHLSQAVHVPHGKLL-------ETD------LP--FNKNDVIYVHCQSGI-RSSIAIGILEH 447 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hCCCcEEEEeCCHHHHhcCcCCCCEECCHHHHH-------HHH------hh--CCCCCeEEEECCCCh-HHHHHHHHHHH
Confidence 456789999999999999999999999999874 111 11 235789999999999 99999999999
Q ss_pred cCCCcEEEeccccccccc
Q psy3426 333 LGFPKVTYVHEHVNSFEC 350 (360)
Q Consensus 333 ~G~~~v~~l~GG~~~w~~ 350 (360)
.||++|++|+||+.+|++
T Consensus 448 ~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 448 KGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp ------------------
T ss_pred cCCCCEEEecChHHHHhh
Confidence 999999999999999975
No 69
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.48 E-value=3e-15 Score=139.28 Aligned_cols=97 Identities=14% Similarity=0.176 Sum_probs=73.1
Q ss_pred CCEEEEEcCCccchh-----------hccccccccccCCCcc--cCccCCCCC-CCCCh-hhhhHH-----hcC---CCe
Q psy3426 255 PKVLVIDIRDNEEYV-----------AESIIGSINIPLARIP--DLESTDLGS-MESSP-EMNILF-----NNK---GSI 311 (360)
Q Consensus 255 ~~~~iiDvR~~~e~~-----------~ghIpgA~~i~~~~~~--~~~~~~~~~-~~~~~-~~~~~~-----~~~---~~~ 311 (360)
.+.++||||++.||. .||||||+|+|+.++. +. .+. +.... ..+.+. .++ +++
T Consensus 173 ~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~----~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ 248 (373)
T 1okg_A 173 PQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRG----DGKVLRSEEEIRHNIMTVVQGAGDAADLSS 248 (373)
T ss_dssp TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCS----SSCEECCHHHHHHHHHTTCC-----CCCTT
T ss_pred cCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCC----CCCccCCHHHHHHHHHhhhcCCCcccCCCC
Confidence 467899999999999 9999999999998762 10 111 11111 111121 145 789
Q ss_pred EEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccccccc-CcccCC
Q psy3426 312 IVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFEC-YGVLGP 356 (360)
Q Consensus 312 iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~-~gl~~~ 356 (360)
||+||.+|. ||..++..|...||++|++|+||+.+|.. .|++++
T Consensus 249 ivvyC~sG~-rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~ 293 (373)
T 1okg_A 249 FVFSCGSGV-TACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIM 293 (373)
T ss_dssp SEEECSSSS-THHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHH
T ss_pred EEEECCchH-HHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcc
Confidence 999999999 99999999999999999999999999987 677643
No 70
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.43 E-value=6.6e-14 Score=127.14 Aligned_cols=111 Identities=12% Similarity=0.120 Sum_probs=80.7
Q ss_pred ccCHHHHHHHhhhcCCCCCEEEEEcCCccchh-----------hccccccccccCCCcccCccCCCCCCCCC--hh----
Q psy3426 238 SLSSTDLLDLINTRFKKPKVLVIDIRDNEEYV-----------AESIIGSINIPLARIPDLESTDLGSMESS--PE---- 300 (360)
Q Consensus 238 ~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~-----------~ghIpgA~~i~~~~~~~~~~~~~~~~~~~--~~---- 300 (360)
.++.+++.+.++.+...+++++||+|++.+|. .||||||+|+|+..+.+. ++..... ..
T Consensus 185 v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~----~~~~~~~~~e~l~~~ 260 (327)
T 3utn_X 185 IVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDP----ETKTYPEAGEAIHAT 260 (327)
T ss_dssp EECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCT----TTCCCCCTTHHHHHH
T ss_pred eecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCC----CCCCCCCcHHHHHHH
Confidence 46788888877322222467999999999885 499999999999887421 1111110 10
Q ss_pred h-hhH-----HhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCcc
Q psy3426 301 M-NIL-----FNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGV 353 (360)
Q Consensus 301 ~-~~~-----~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl 353 (360)
. +.+ ..+++++||+||.+|. +|..++..|...|+++|.+|+|++.+|....-
T Consensus 261 l~~~~~~~~~gid~~k~vI~yCgsGv-tA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~ 318 (327)
T 3utn_X 261 LEKALKDFHCTLDPSKPTICSCGTGV-SGVIIKTALELAGVPNVRLYDGSWTEWVLKSG 318 (327)
T ss_dssp HHHHHHHTTCCCCTTSCEEEECSSSH-HHHHHHHHHHHTTCCSEEEESSHHHHHHHHHC
T ss_pred HHHHHHHhhcCCCCCCCEEEECChHH-HHHHHHHHHHHcCCCCceeCCCcHHHhccccC
Confidence 1 111 1235689999999999 99999999999999999999999999986543
No 71
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.04 E-value=1.2e-10 Score=111.77 Aligned_cols=79 Identities=20% Similarity=0.315 Sum_probs=60.5
Q ss_pred CCCEEEEEcCCccchhhccccccccccCCC-cccCccCCCCCCCCChhhhhHHhcCCCeEEEEcCCCchhHHHHHHHHHH
Q psy3426 254 KPKVLVIDIRDNEEYVAESIIGSINIPLAR-IPDLESTDLGSMESSPEMNILFNNKGSIIVIVGGEDSMRQAKFARFIVR 332 (360)
Q Consensus 254 ~~~~~iiDvR~~~e~~~ghIpgA~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~~s~~~~~~L~~ 332 (360)
++++++||+|++.+|.+||||||+|+|... +. ...+.+. .++++||+||+ +. ++.++++.|.+
T Consensus 294 ~~~~~ilD~R~~~~y~~gHIpGAv~ip~~~~~~-------------~~~~~~~-~~~~~vvly~~-~~-~a~~a~~~L~~ 357 (466)
T 3r2u_A 294 NTNRLTFDLRSKEAYHGGHIEGTINIPYDKNFI-------------NQIGWYL-NYDQEINLIGD-YH-LVSKATHTLQL 357 (466)
T ss_dssp CCCSEEEECSCHHHHHHSCCTTCEECCSSTTHH-------------HHHTTTC-CTTSCEEEESC-HH-HHHHHHHHHHT
T ss_pred CCCeEEEECCCHHHHhhCCCCCcEECCccHHHH-------------HHHHhcc-CCCCeEEEEEC-Cc-hHHHHHHHhhh
Confidence 467899999999999999999999999874 22 1112222 46789999999 55 79999999999
Q ss_pred cCCCcEEE-eccccccc
Q psy3426 333 LGFPKVTY-VHEHVNSF 348 (360)
Q Consensus 333 ~G~~~v~~-l~GG~~~w 348 (360)
.||++|+. ++||...|
T Consensus 358 ~G~~~v~~~l~g~~~~~ 374 (466)
T 3r2u_A 358 IGYDDIAGYQLPQSKIQ 374 (466)
T ss_dssp TTCCCEEEEECCC----
T ss_pred hhcccccccccCccccc
Confidence 99999998 56654443
No 72
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=96.86 E-value=0.0014 Score=52.53 Aligned_cols=87 Identities=14% Similarity=0.185 Sum_probs=50.4
Q ss_pred ccCHHHHHHHhhhcCCCCCEEEEEcCCccc------------hhhc-cccccccccCCCcccCccCCCCCCCCChhhhhH
Q psy3426 238 SLSSTDLLDLINTRFKKPKVLVIDIRDNEE------------YVAE-SIIGSINIPLARIPDLESTDLGSMESSPEMNIL 304 (360)
Q Consensus 238 ~is~~~l~~~~~~~~~~~~~~iiDvR~~~e------------~~~g-hIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (360)
.++++++..+. +.+-..|||+|++.| +..+ +|+|.+|+|..... ....... .....+
T Consensus 29 ~~~~~d~~~L~----~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~~----~~~~~~~--~~~~~l 98 (156)
T 2f46_A 29 QLTKADAEQIA----QLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTARD----IQKHDVE--TFRQLI 98 (156)
T ss_dssp CCCGGGHHHHH----HHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTTT----CCHHHHH--HHHHHH
T ss_pred CCCHHHHHHHH----HCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCCC----CCHHHHH--HHHHHH
Confidence 45777776655 222347999998765 2234 58889999987421 1110000 111222
Q ss_pred HhcCCCeEEEEcCCCchhHHHHHHHH-HHcCCC
Q psy3426 305 FNNKGSIIVIVGGEDSMRQAKFARFI-VRLGFP 336 (360)
Q Consensus 305 ~~~~~~~iv~~c~~g~~~s~~~~~~L-~~~G~~ 336 (360)
...+.+|+++|.+|. |+..++..+ ...|.+
T Consensus 99 -~~~~~pVlvHC~sG~-Rs~~l~al~l~~~g~~ 129 (156)
T 2f46_A 99 -GQAEYPVLAYCRTGT-RCSLLWGFRRAAEGMP 129 (156)
T ss_dssp -HTSCSSEEEECSSSH-HHHHHHHHHHHHTTCC
T ss_pred -HhCCCCEEEECCCCC-CHHHHHHHHHHHcCCC
Confidence 234779999999999 877443332 445654
No 73
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=89.86 E-value=0.057 Score=43.54 Aligned_cols=25 Identities=32% Similarity=0.547 Sum_probs=22.4
Q ss_pred EEEEEcCCccchhhccccccccccCCCcc
Q psy3426 257 VLVIDIRDNEEYVAESIIGSINIPLARIP 285 (360)
Q Consensus 257 ~~iiDvR~~~e~~~ghIpgA~~i~~~~~~ 285 (360)
.++||||++.||. |||+|+|...+.
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg~lE 146 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQLRVE 146 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChhHHH
Confidence 4999999999998 999999988664
No 74
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=84.63 E-value=3.7 Score=31.51 Aligned_cols=87 Identities=9% Similarity=0.067 Sum_probs=44.4
Q ss_pred CHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccc--cccccCCCcccCccCCCCCCCCC-hhhhhHHh--cCCCeEEE
Q psy3426 240 SSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIG--SINIPLARIPDLESTDLGSMESS-PEMNILFN--NKGSIIVI 314 (360)
Q Consensus 240 s~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpg--A~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~iv~ 314 (360)
+++++..+. +.+=..|||+|+..+......+| -+++|+.+.. .+..... .....+.. .++.+|+|
T Consensus 24 ~~~~~~~L~----~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~~------~~~~~~~~~~~~~i~~~~~~~~~vlV 93 (150)
T 4erc_A 24 LPAHYQFLL----DLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFC------PPAPDQIDRFVQIVDEANARGEAVGV 93 (150)
T ss_dssp SHHHHHHHH----HTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTS------CCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHH----HCCCCEEEEcCCCCCCcccccCCceEEEEecCCCC------CCCHHHHHHHHHHHHHHHHCCCCEEE
Confidence 455555544 23334799999976644333344 2345554332 1111111 11122211 24679999
Q ss_pred EcCCCchhHH-HHHHHH-HHcCCC
Q psy3426 315 VGGEDSMRQA-KFARFI-VRLGFP 336 (360)
Q Consensus 315 ~c~~g~~~s~-~~~~~L-~~~G~~ 336 (360)
+|..|..|+. .++-.| ...|.+
T Consensus 94 HC~~G~~Rsg~~~a~~l~~~~~~~ 117 (150)
T 4erc_A 94 HCALGFGRTGTMLACYLVKERGLA 117 (150)
T ss_dssp ECSSSSHHHHHHHHHHHHHHHTCC
T ss_pred ECCCCCCHHHHHHHHHHHHHcCCC
Confidence 9999986666 333333 445664
No 75
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=79.30 E-value=6.3 Score=30.15 Aligned_cols=75 Identities=9% Similarity=0.093 Sum_probs=38.4
Q ss_pred CEEEEEcCCccchhhcccc--ccccccCCCcccCccCCCCCCCCC-hhhhhHHh--cCCCeEEEEcCCCchhHHHH-HHH
Q psy3426 256 KVLVIDIRDNEEYVAESII--GSINIPLARIPDLESTDLGSMESS-PEMNILFN--NKGSIIVIVGGEDSMRQAKF-ARF 329 (360)
Q Consensus 256 ~~~iiDvR~~~e~~~ghIp--gA~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~iv~~c~~g~~~s~~~-~~~ 329 (360)
=..|||+|+..|+.....+ +-.++|+.+.. ....... .....+.. ..+.+|+|+|..|..|+..+ +-.
T Consensus 37 i~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~------~p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~~Rsg~~~~~~ 110 (151)
T 2img_A 37 VRHLVSLTERGPPHSDSCPGLTLHRLRIPDFC------PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACY 110 (151)
T ss_dssp EEEEEECSSSCCTTGGGCTTSEEEECCCCTTC------CCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHH
T ss_pred CCEEEECCCCCCCCHHHHhhCCeEEEeCCCCC------CCCHHHHHHHHHHHHHHHhCCCcEEEECCCCCChHHHHHHHH
Confidence 3479999988665433332 24556655432 1111111 11122221 24679999999987565543 333
Q ss_pred HHHc-CCC
Q psy3426 330 IVRL-GFP 336 (360)
Q Consensus 330 L~~~-G~~ 336 (360)
|... |.+
T Consensus 111 l~~~~~~~ 118 (151)
T 2img_A 111 LVKERGLA 118 (151)
T ss_dssp HHHHHCCC
T ss_pred HHHHhCcC
Confidence 3333 653
No 76
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=70.98 E-value=11 Score=28.67 Aligned_cols=29 Identities=21% Similarity=0.247 Sum_probs=20.6
Q ss_pred CCCeEEEEcCCCchhHHH--HHHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAK--FARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~--~~~~L~~~G~~ 336 (360)
.+.+|+++|..|..|+.. +|+.+...|.+
T Consensus 80 ~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~~ 110 (145)
T 2nt2_A 80 HGSKCLVHSKMGVSRSASTVIAYAMKEYGWN 110 (145)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHhCCC
Confidence 467999999999657754 35556656753
No 77
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=70.07 E-value=8.5 Score=30.12 Aligned_cols=29 Identities=17% Similarity=0.233 Sum_probs=20.7
Q ss_pred CCCeEEEEcCCCchhHHHH--HHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAKF--ARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~--~~~L~~~G~~ 336 (360)
.+.+|+++|..|..|+..+ |+.+...|.+
T Consensus 88 ~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~~ 118 (164)
T 2hcm_A 88 DGGSCLVYCKNGRSRSAAVCTAYLMRHRGHS 118 (164)
T ss_dssp TTCEEEEEESSSSHHHHHHHHHHHHHHSCCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHhCCC
Confidence 4679999999996677643 4555566754
No 78
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=67.49 E-value=12 Score=29.23 Aligned_cols=29 Identities=14% Similarity=0.154 Sum_probs=19.9
Q ss_pred CCCeEEEEcCCCchhHHH--HHHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAK--FARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~--~~~~L~~~G~~ 336 (360)
.+.+|+|+|..|..|+.. +|..+...|.+
T Consensus 82 ~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~~ 112 (165)
T 1wrm_A 82 RGESCLVHCLAGVSRSVTLVIAYIMTVTDFG 112 (165)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSSCC
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHHcCCC
Confidence 577999999999657776 34444445653
No 79
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=66.42 E-value=10 Score=29.04 Aligned_cols=29 Identities=17% Similarity=0.193 Sum_probs=20.2
Q ss_pred CCCeEEEEcCCCchhHH-H-HHHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQA-K-FARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~-~-~~~~L~~~G~~ 336 (360)
.+.+|+++|..|..|+. . +|..+...|.+
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~ 114 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHLT 114 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 46799999999965776 3 34445556754
No 80
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=66.15 E-value=13 Score=29.54 Aligned_cols=28 Identities=14% Similarity=0.213 Sum_probs=19.3
Q ss_pred CCeEEEEcCCCchhHHH--HHHHHHHcCCC
Q psy3426 309 GSIIVIVGGEDSMRQAK--FARFIVRLGFP 336 (360)
Q Consensus 309 ~~~iv~~c~~g~~~s~~--~~~~L~~~G~~ 336 (360)
+.+|+|+|..|..|+.. ++..+...|.+
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~~ 144 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKMD 144 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCCC
Confidence 67899999999766665 34444556764
No 81
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=62.91 E-value=13 Score=28.51 Aligned_cols=29 Identities=10% Similarity=-0.001 Sum_probs=19.4
Q ss_pred CCCeEEEEcCCCchhHHHHH-HHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAKFA-RFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~~-~~L~~~G~~ 336 (360)
++.+|+++|..|..|+..++ ..|...|.+
T Consensus 91 ~~~~vlvHC~aG~~RTg~~~a~~l~~~g~~ 120 (151)
T 1xri_A 91 KNHPVLIHCKRGKHRTGCLVGCLRKLQKWC 120 (151)
T ss_dssp GGCSEEEECSSSSSHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 46799999999975665444 344445654
No 82
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=60.24 E-value=17 Score=28.23 Aligned_cols=29 Identities=14% Similarity=0.108 Sum_probs=20.1
Q ss_pred CCCeEEEEcCCCchhHHH--HHHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAK--FARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~--~~~~L~~~G~~ 336 (360)
.+.+|+|+|..|..|+.. +|..+...|.+
T Consensus 83 ~~~~VlVHC~aG~~RSg~~~~aylm~~~~~~ 113 (160)
T 1yz4_A 83 NGGNCLVHSFAGISRSTTIVTAYVMTVTGLG 113 (160)
T ss_dssp TTCCEEEEETTSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 467899999999657764 34444556764
No 83
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=60.24 E-value=26 Score=26.49 Aligned_cols=29 Identities=10% Similarity=0.133 Sum_probs=19.4
Q ss_pred CCCeEEEEcCCCchhHHH--HHHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAK--FARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~--~~~~L~~~G~~ 336 (360)
++.+|+|+|..|..|+.. ++..+...|.+
T Consensus 80 ~~~~VlVHC~~G~~RS~~~~~aylm~~~~~~ 110 (144)
T 3ezz_A 80 CRGRVLVHSQAGISRSATICLAYLMMKKRVR 110 (144)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHTCC
T ss_pred cCCeEEEECCCCCChhHHHHHHHHHHHcCCC
Confidence 467899999999766653 34444556663
No 84
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=59.48 E-value=20 Score=28.77 Aligned_cols=29 Identities=14% Similarity=0.111 Sum_probs=20.6
Q ss_pred CCCeEEEEcCCCchhHHH--HHHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAK--FARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~--~~~~L~~~G~~ 336 (360)
.+.+|+|+|..|..|+.. +|..+...|.+
T Consensus 96 ~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~s 126 (188)
T 2esb_A 96 KQGRTLLHCAAGVSRSAALCLAYLMKYHAMS 126 (188)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 477999999999657764 35555566754
No 85
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=56.34 E-value=23 Score=28.53 Aligned_cols=29 Identities=14% Similarity=0.048 Sum_probs=20.4
Q ss_pred CCCeEEEEcCCCchhHHH--HHHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAK--FARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~--~~~~L~~~G~~ 336 (360)
.+.+|+|+|..|..|+.. +|+.+...|.+
T Consensus 102 ~~~~VlVHC~aG~~RSgtvv~ayLm~~~~~s 132 (190)
T 2wgp_A 102 KHGATLVHCAAGVSRSATLCIAYLMKFHNVC 132 (190)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCCEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 467899999999657763 35555656754
No 86
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=53.76 E-value=32 Score=30.74 Aligned_cols=91 Identities=8% Similarity=0.099 Sum_probs=51.1
Q ss_pred ccCHHHHHHHhhhcCCCCCEEEEEcCCccchhhccccc-cccccCCCcccCccCCCCCCCCC-----hhhhhHHhcCCCe
Q psy3426 238 SLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIG-SINIPLARIPDLESTDLGSMESS-----PEMNILFNNKGSI 311 (360)
Q Consensus 238 ~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpg-A~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 311 (360)
.-..+++...++.+. ...+.+++.+++..|......+ -.++|+.+.. .+..+.. ....++...++..
T Consensus 49 Rn~i~dv~~~L~~~h-~~~y~V~NL~sE~~Yd~~~f~~~v~~~p~pD~~------~P~~~~l~~~~~~v~~~l~~~~~~~ 121 (339)
T 3v0d_A 49 RNPIGEVSRFFKTKH-PDKFRIYNLCSERGYDETKFDNHVYRVMIDDHN------VPTLVDLLKFIDDAKVWMTSDPDHV 121 (339)
T ss_dssp SEEHHHHHHHHHHHS-TTCEEEEEEETTCCCCGGGGTTCEEEEEECTTS------CCCHHHHHHHHHHHHHHHHTCTTCE
T ss_pred cCCHHHHHHHHHHhC-CCceEEEECCCCCCCChHHcCCeEEEeccCCCC------CCCHHHHHHHHHHHHHHHhcCCCCe
Confidence 346778888776544 3579999998666665544333 3355555432 1111111 1112333344579
Q ss_pred EEEEcCCCchhHH-HHHHHHHHcCC
Q psy3426 312 IVIVGGEDSMRQA-KFARFIVRLGF 335 (360)
Q Consensus 312 iv~~c~~g~~~s~-~~~~~L~~~G~ 335 (360)
|+|+|..|.+|+. .+|-.|...|.
T Consensus 122 v~vHC~~G~gRtg~~ia~~Li~~~~ 146 (339)
T 3v0d_A 122 IAIHSKGGKGRTGTLVSSWLLEDGK 146 (339)
T ss_dssp EEEECSSSSHHHHHHHHHHHHHTTS
T ss_pred EEEEeCCCCcchHHHHHHHHHHhcC
Confidence 9999999886554 44555555543
No 87
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=53.50 E-value=28 Score=28.38 Aligned_cols=29 Identities=10% Similarity=0.121 Sum_probs=20.0
Q ss_pred CCCeEEEEcCCCchhHHHH--HHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAKF--ARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~--~~~L~~~G~~ 336 (360)
.+.+|+|+|..|..||..+ |+.+...|.+
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s 160 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIYENMT 160 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHHcCCC
Confidence 4678999999996576643 4455556653
No 88
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=53.17 E-value=30 Score=26.10 Aligned_cols=29 Identities=10% Similarity=0.147 Sum_probs=19.6
Q ss_pred CCCeEEEEcCCCchhHHH--HHHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAK--FARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~--~~~~L~~~G~~ 336 (360)
.+.+|+|+|..|..||.. ++..+...|.+
T Consensus 80 ~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~~ 110 (144)
T 3s4e_A 80 KDGVVLVHSNAGVSRAAAIVIGFLMNSEQTS 110 (144)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEEcCCCCchHHHHHHHHHHHHcCCC
Confidence 467899999999766543 34444556664
No 89
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=52.65 E-value=17 Score=28.47 Aligned_cols=40 Identities=8% Similarity=0.032 Sum_probs=30.2
Q ss_pred CeEEEEcCCCchhHHHHHHHHHH----cCCCcEEEecccccccc
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVR----LGFPKVTYVHEHVNSFE 349 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~----~G~~~v~~l~GG~~~w~ 349 (360)
..|+|+|.+..+||..|...+++ .|..++.+...|..+|.
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~~ 50 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWN 50 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCCS
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCcc
Confidence 36999999887777766665544 46666888889999885
No 90
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=52.45 E-value=54 Score=26.10 Aligned_cols=30 Identities=17% Similarity=0.123 Sum_probs=20.0
Q ss_pred cCCCeEEEEcCCCchhHHH-HHHHHHHcCCC
Q psy3426 307 NKGSIIVIVGGEDSMRQAK-FARFIVRLGFP 336 (360)
Q Consensus 307 ~~~~~iv~~c~~g~~~s~~-~~~~L~~~G~~ 336 (360)
.++.+|+|.|..|.+|+.. ++..|...|.+
T Consensus 115 ~~~~~VlVHC~aG~gRSg~~va~~L~~~g~~ 145 (189)
T 3rz2_A 115 EPGCCIAVHCVAGLGRAPVLVALALIEGGMK 145 (189)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHHHHTTTCC
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHHHHcCCC
Confidence 4577999999999766554 44444445553
No 91
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=51.09 E-value=17 Score=33.55 Aligned_cols=113 Identities=14% Similarity=0.279 Sum_probs=61.3
Q ss_pred CCHHHHHHHHHHhHhhC---CCccccccccccchhhhhhhhhhhhhhhccccccc---CHHHHHHHhhhcCCCCC-EEEE
Q psy3426 188 VDIEQSVTDSIDIYCVT---PRSITFRMHESESTLLEGALLQRHNQALSEFCSSL---SSTDLLDLINTRFKKPK-VLVI 260 (360)
Q Consensus 188 ~d~~~li~~A~~l~~~~---P~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---s~~~l~~~~~~~~~~~~-~~ii 260 (360)
-|++++.+.|..++... ..+|..+-.|..-.++. ++.++.+.....| .+ .+.--+ .+++ .+-+
T Consensus 93 ~dle~I~~~~~~~~~~~~~~~~tF~V~~kR~~k~f~~-----~S~ei~r~vG~~i~~~~~-~~~Vdl----~~Pdi~i~v 162 (413)
T 2c5s_A 93 SELEDIKKGALAAFLQVKGDVKTFKITVHRSYKHFPM-----RTMELLPEIGGHILENTE-DITVDV----HNPDVNVRV 162 (413)
T ss_dssp SSHHHHHHHHHHHHHTCCSCCCEEEEEEEECCTTCSS-----CHHHHHHHHHHHHHTTSS-SCEECS----SSCSEEEEE
T ss_pred CCHHHHHHHHHHHHHhhccCCCcEEEEEEECCCCCCC-----ChHHHHHHHHHHHHHhCC-CCeecc----CCCCeEEEE
Confidence 47999999999998863 34777776666643221 0111111110000 00 000001 2333 3467
Q ss_pred EcCCccchhhcc-ccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEEcCCCchhHHHHHHHHHHcCCC
Q psy3426 261 DIRDNEEYVAES-IIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIVGGEDSMRQAKFARFIVRLGFP 336 (360)
Q Consensus 261 DvR~~~e~~~gh-IpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~ 336 (360)
++|....|-... ++|.-.+|... +..+++..++|. .|..+++.+.+.|++
T Consensus 163 EI~~~~~~i~~~~~~g~gglpi~~-------------------------~~kvlvalSGGv-DS~vll~ll~~~G~~ 213 (413)
T 2c5s_A 163 EIRSGYSYIMCDERMGAGGLPVGV-------------------------GGKVMVLLSGGI-DSPVAAYLTMKRGVS 213 (413)
T ss_dssp EECSSEEEEEEEEEECCCSBCTTT-------------------------TEEEEEECCSSS-HHHHHHHHHHHBTEE
T ss_pred EEEeceeEEEEecccCCCCCccCC-------------------------CCeEEEEeCCCC-hHHHHHHHHHHcCCc
Confidence 777666664433 56665555431 235777777777 788888888878764
No 92
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=49.72 E-value=21 Score=27.70 Aligned_cols=41 Identities=15% Similarity=0.276 Sum_probs=32.7
Q ss_pred HHhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccc
Q psy3426 304 LFNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVN 346 (360)
Q Consensus 304 ~~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~ 346 (360)
+...++.+++++|.+.. .+..++..|.+.|+. +..+.|++.
T Consensus 30 l~~~~~~~~lVF~~~~~-~~~~l~~~L~~~~~~-~~~~hg~~~ 70 (163)
T 2hjv_A 30 LMTENPDSCIIFCRTKE-HVNQLTDELDDLGYP-CDKIHGGMI 70 (163)
T ss_dssp HHHHCCSSEEEECSSHH-HHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred HHhcCCCcEEEEECCHH-HHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 33345667899999988 899999999999985 777888864
No 93
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=48.87 E-value=39 Score=27.76 Aligned_cols=29 Identities=17% Similarity=0.274 Sum_probs=20.5
Q ss_pred CCCeEEEEcCCCchhHHH--HHHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAK--FARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~--~~~~L~~~G~~ 336 (360)
.+.+|+|+|..|..|+.. +|+.+...|.+
T Consensus 82 ~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~s 112 (211)
T 2g6z_A 82 KGGKVLVHSEAGISRSPTICMAYLMKTKQFR 112 (211)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEECCCCCCcHHHHHHHHHHHHcCCC
Confidence 467899999999657763 45555656753
No 94
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=47.97 E-value=27 Score=30.52 Aligned_cols=35 Identities=23% Similarity=0.102 Sum_probs=22.6
Q ss_pred hhcccccccCHHHHHHHhhhcCCCCCEEEEEcCCccchh
Q psy3426 231 ALSEFCSSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYV 269 (360)
Q Consensus 231 ~~~~~~~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~ 269 (360)
+++.....++++++..+. +-.=-.|||.|++.|..
T Consensus 48 yRS~~l~~lt~~d~~~L~----~lGI~tVIDLR~~~E~~ 82 (296)
T 1ywf_A 48 FRSSELSRLDDAGRATLR----RLGITDVADLRSSREVA 82 (296)
T ss_dssp EEESCCTTCCHHHHHHHH----HHTCCEEEECCCHHHHH
T ss_pred eccCCcccCCHHHHHHHH----hCCCCEEEECcChhhhh
Confidence 444455678888876654 11224799999987743
No 95
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=47.38 E-value=25 Score=27.62 Aligned_cols=37 Identities=8% Similarity=0.071 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccc
Q psy3426 308 KGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVN 346 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~ 346 (360)
++.+++++|.+.. .+..++..|.+.|+. +..+.|++.
T Consensus 33 ~~~~~lVF~~~~~-~~~~l~~~L~~~~~~-~~~~~g~~~ 69 (175)
T 2rb4_A 33 TIGQAIIFCQTRR-NAKWLTVEMIQDGHQ-VSLLSGELT 69 (175)
T ss_dssp CCSEEEEECSCHH-HHHHHHHHHHTTTCC-EEEECSSCC
T ss_pred CCCCEEEEECCHH-HHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 4568999999988 899999999999985 777888864
No 96
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=47.24 E-value=14 Score=29.06 Aligned_cols=42 Identities=10% Similarity=0.116 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCchhHHHHHHHHHHc----CC-CcEEEeccccccccc
Q psy3426 309 GSIIVIVGGEDSMRQAKFARFIVRL----GF-PKVTYVHEHVNSFEC 350 (360)
Q Consensus 309 ~~~iv~~c~~g~~~s~~~~~~L~~~----G~-~~v~~l~GG~~~w~~ 350 (360)
...|+|+|.+..+||..|...+++. |. .++.+...|..+|..
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~ 50 (161)
T 2cwd_A 4 PVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHV 50 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCcc
Confidence 3479999998877887766666543 66 478888999999863
No 97
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=47.23 E-value=27 Score=27.43 Aligned_cols=41 Identities=22% Similarity=0.230 Sum_probs=33.0
Q ss_pred HHhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccc
Q psy3426 304 LFNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVN 346 (360)
Q Consensus 304 ~~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~ 346 (360)
+...++.+++++|.+.. .+..++..|.+.|+. +..+.|++.
T Consensus 26 l~~~~~~~~lVF~~~~~-~~~~l~~~L~~~~~~-~~~~hg~~~ 66 (172)
T 1t5i_A 26 LDVLEFNQVVIFVKSVQ-RCIALAQLLVEQNFP-AIAIHRGMP 66 (172)
T ss_dssp HHHSCCSSEEEECSSHH-HHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred HHhCCCCcEEEEECCHH-HHHHHHHHHHhcCCC-EEEEECCCC
Confidence 33445668999999988 899999999999986 667888864
No 98
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=47.02 E-value=22 Score=27.87 Aligned_cols=40 Identities=10% Similarity=0.152 Sum_probs=30.3
Q ss_pred CeEEEEcCCCchhHHHHHHHHHHc----CCC-cEEEecccccccc
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVRL----GFP-KVTYVHEHVNSFE 349 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~~----G~~-~v~~l~GG~~~w~ 349 (360)
..|+|+|.+..+||..|...+++. |.. ++.+...|..+|.
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~ 49 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWH 49 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTT
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCc
Confidence 479999998877887766666554 553 5888899999885
No 99
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=44.85 E-value=30 Score=26.75 Aligned_cols=41 Identities=10% Similarity=0.037 Sum_probs=32.4
Q ss_pred HHhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccc
Q psy3426 304 LFNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVN 346 (360)
Q Consensus 304 ~~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~ 346 (360)
+...++.+++++|.+.. .+..++..|.+.|+. +..+.|++.
T Consensus 25 l~~~~~~~~lVF~~~~~-~~~~l~~~L~~~~~~-~~~~~~~~~ 65 (165)
T 1fuk_A 25 YDSISVTQAVIFCNTRR-KVEELTTKLRNDKFT-VSAIYSDLP 65 (165)
T ss_dssp HHHTTCSCEEEEESSHH-HHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred HHhCCCCCEEEEECCHH-HHHHHHHHHHHcCCC-EEEEECCCC
Confidence 33335667899999988 899999999999985 777888864
No 100
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=44.17 E-value=43 Score=26.94 Aligned_cols=29 Identities=7% Similarity=0.093 Sum_probs=18.5
Q ss_pred CCCeEEEEcCCCchhHHHH--HHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAKF--ARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~--~~~L~~~G~~ 336 (360)
.+.+|+|+|..|..|+..+ +..+...|.+
T Consensus 124 ~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~~ 154 (195)
T 2q05_A 124 RNEPVLVHCAAGVNRSGAMILAYLMSKNKES 154 (195)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred cCCcEEEEcCCCCChHHHHHHHHHHHHhCCC
Confidence 4678999999996565543 3333345554
No 101
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=44.04 E-value=25 Score=27.39 Aligned_cols=39 Identities=5% Similarity=-0.057 Sum_probs=29.3
Q ss_pred eEEEEcCCCchhHHHHHHHHHH----cCCC-cEEEecccccccc
Q psy3426 311 IIVIVGGEDSMRQAKFARFIVR----LGFP-KVTYVHEHVNSFE 349 (360)
Q Consensus 311 ~iv~~c~~g~~~s~~~~~~L~~----~G~~-~v~~l~GG~~~w~ 349 (360)
.|+|+|.+..+||..|...+++ .|.. ++.+...|..+|.
T Consensus 3 ~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~~ 46 (156)
T 2gi4_A 3 KILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGEH 46 (156)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCSS
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCcc
Confidence 6899999887788776666654 3664 5788899999884
No 102
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=43.31 E-value=13 Score=29.97 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=29.9
Q ss_pred CCeEEEEcCCCchhHHHHHHHHHHc----CCCcEEEecccccccc
Q psy3426 309 GSIIVIVGGEDSMRQAKFARFIVRL----GFPKVTYVHEHVNSFE 349 (360)
Q Consensus 309 ~~~iv~~c~~g~~~s~~~~~~L~~~----G~~~v~~l~GG~~~w~ 349 (360)
...|+|+|.+..+||..|...+++. |. ++.+...|..+|.
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~-~~~v~SAGt~~~~ 77 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAEREGL-NVNVRSAGVFASP 77 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTC-CEEEEEEETTCCT
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHhcCC-cEEEEeeecCCcC
Confidence 3579999998877887766666543 42 5888889998885
No 103
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=42.99 E-value=25 Score=26.72 Aligned_cols=38 Identities=11% Similarity=0.017 Sum_probs=30.3
Q ss_pred CeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccc
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNS 347 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~ 347 (360)
+.|+|+|.+...||..|...+.+..-.++.+...|..+
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~~ 41 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEA 41 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESSC
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCCC
Confidence 36999999887799988888887754568888888765
No 104
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=42.07 E-value=28 Score=30.52 Aligned_cols=114 Identities=10% Similarity=0.130 Sum_probs=57.7
Q ss_pred CCHHHHHHHHHHhHhhC----CC---ccccccccccchhhhhhhhhhhhhhhcccccccCHHHHHHHhhhcCCCCC-EEE
Q psy3426 188 VDIEQSVTDSIDIYCVT----PR---SITFRMHESESTLLEGALLQRHNQALSEFCSSLSSTDLLDLINTRFKKPK-VLV 259 (360)
Q Consensus 188 ~d~~~li~~A~~l~~~~----P~---s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~l~~~~~~~~~~~~-~~i 259 (360)
-|++++.+.|..++... .. +|..+-.|..-.++. ++.+..+.....|-..- -++-+-.+++ .+-
T Consensus 82 ~dle~I~~~~~~~~~~~~~~~~~~~~tF~Vr~kR~~k~~~~-----~S~ei~r~vG~~i~~~~---~~~Vdl~~PD~~i~ 153 (307)
T 1vbk_A 82 ASLEKINRTALLMFRKKAKEVGKERPKFRVTARRITKEFPL-----DSLEIQAKVGEYILNNE---NCEVDLKNYDIEIG 153 (307)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCSSCEEEEEEEESSSCSSS-----CHHHHHHHHHHHHHHHS---SCEECSSSCSEEEE
T ss_pred CCHHHHHHHHHHHHHHhhcccCCCCceEEEEEEeCCCCCCC-----ChHHHHHHHHHHHHHHh---CCceeeeCCCEEEE
Confidence 47999999998887653 23 776666666621111 11122211111110000 0000113444 467
Q ss_pred EEcCCccchhh-ccccccccccCCCcccCccCCCCCCCCChhhhhHHhcCCCeEEEEcCCCchhHHHHHHHHHHcCCC
Q psy3426 260 IDIRDNEEYVA-ESIIGSINIPLARIPDLESTDLGSMESSPEMNILFNNKGSIIVIVGGEDSMRQAKFARFIVRLGFP 336 (360)
Q Consensus 260 iDvR~~~e~~~-ghIpgA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~ 336 (360)
|++|...-|-. ..+||.=-+|... ..++++..++ . .|..+++.|.+.|++
T Consensus 154 VEi~~~~~yv~~~~~~g~GGlP~g~-------------------------~~kvlvllSG-v-DS~vaa~ll~~~G~~ 204 (307)
T 1vbk_A 154 IEIMQGKAYIYTEKIKGWGGLPIGT-------------------------EGRMIGILHD-E-LSALAIFLMMKRGVE 204 (307)
T ss_dssp EEEETTEEEEESCCEECCCSBCTTT-------------------------TCEEEEECSS-H-HHHHHHHHHHHBTCE
T ss_pred EEEEcCeEEEEEeccccCCCCCcCC-------------------------CCcEEEEEeC-C-cHHHHHHHHHhCCCe
Confidence 89988655543 3456666666551 1134444444 4 677777777777764
No 105
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=41.24 E-value=27 Score=27.79 Aligned_cols=37 Identities=16% Similarity=0.327 Sum_probs=28.3
Q ss_pred CCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccc
Q psy3426 308 KGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVN 346 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~ 346 (360)
++.+++++|.+.. .+..++..|...|+. +..+.||+.
T Consensus 45 ~~~k~lVF~~~~~-~~~~l~~~L~~~g~~-~~~lhg~~~ 81 (185)
T 2jgn_A 45 KDSLTLVFVETKK-GADSLEDFLYHEGYA-CTSIHGDRS 81 (185)
T ss_dssp CCSCEEEEESCHH-HHHHHHHHHHHTTCC-EEEEC----
T ss_pred CCCeEEEEECCHH-HHHHHHHHHHHcCCc-eEEEeCCCC
Confidence 4567999999988 899999999999985 777888865
No 106
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=41.21 E-value=28 Score=27.19 Aligned_cols=41 Identities=7% Similarity=0.035 Sum_probs=30.5
Q ss_pred CCeEEEEcCCCchhHHHHHHHHHH----cCCC-cEEEecccccccc
Q psy3426 309 GSIIVIVGGEDSMRQAKFARFIVR----LGFP-KVTYVHEHVNSFE 349 (360)
Q Consensus 309 ~~~iv~~c~~g~~~s~~~~~~L~~----~G~~-~v~~l~GG~~~w~ 349 (360)
...|+|+|.+..+||..|...+++ .|.. ++.+...|..+|.
T Consensus 5 ~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~ 50 (157)
T 3n8i_A 5 TKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYE 50 (157)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTT
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccc
Confidence 347999999887788776655544 4665 6888899998884
No 107
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=40.55 E-value=17 Score=28.59 Aligned_cols=40 Identities=3% Similarity=-0.021 Sum_probs=29.7
Q ss_pred CeEEEEcCCCchhHHHHHHHHHHc----CCC-c-EEEecccccccc
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVRL----GFP-K-VTYVHEHVNSFE 349 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~~----G~~-~-v~~l~GG~~~w~ 349 (360)
.+|+|+|.+..+||..|...+++. |.. + +.+...|..+|.
T Consensus 8 ~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~ 53 (161)
T 1d1q_A 8 ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYH 53 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCc
Confidence 479999998877887666665543 554 4 888889998884
No 108
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=40.06 E-value=93 Score=27.96 Aligned_cols=88 Identities=10% Similarity=0.132 Sum_probs=48.7
Q ss_pred CHHHHHHHhhhcCCCCCEEEEEcCCccchhhcccccc-ccccCCCcccCccCCCCCCCCC-----hhhhhHHhcCCCeEE
Q psy3426 240 SSTDLLDLINTRFKKPKVLVIDIRDNEEYVAESIIGS-INIPLARIPDLESTDLGSMESS-----PEMNILFNNKGSIIV 313 (360)
Q Consensus 240 s~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgA-~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~iv 313 (360)
..+++...++.+. ...+.|++.++ ..|......+. .++|+.+-. .+.++.. ....++...++..++
T Consensus 48 ~i~~v~~~L~~~H-~~~y~V~NLse-~~Yd~~~f~~~V~~~~~pD~~------~P~l~~l~~~~~~i~~~l~~~~~~~v~ 119 (361)
T 3n0a_A 48 QVDDIRSFLDSRH-LDHYTVYNLSP-KSYRTAKFHSRVSECSWPIRQ------APSLHNLFAVCRNMYNWLLQNPKNVCV 119 (361)
T ss_dssp -CHHHHHHHHHHH-TTCEEEEECSS-SCCGGGSCGGGEEECCCCSSS------CCCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CHHHHHHHHHHhC-CCeEEEEECCC-CCCChhhcCCcEEEeecCCCC------CCCHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 3466777765444 35799999965 56665544442 345555432 1112111 112333344567899
Q ss_pred EEcCCCchhHH-HHHHHHHHcCC
Q psy3426 314 IVGGEDSMRQA-KFARFIVRLGF 335 (360)
Q Consensus 314 ~~c~~g~~~s~-~~~~~L~~~G~ 335 (360)
++|..|.+|+. .+|-.|...|.
T Consensus 120 VHC~aG~GRtg~~ia~~Li~~~~ 142 (361)
T 3n0a_A 120 VHCLDGRAASSILVGAMFIFCNL 142 (361)
T ss_dssp EEECSCTHHHHHHHHHHHHHTTS
T ss_pred EEeCCCCccHHHHHHHHHHHhcC
Confidence 99999886543 44555555544
No 109
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=39.97 E-value=44 Score=27.19 Aligned_cols=25 Identities=12% Similarity=-0.080 Sum_probs=17.2
Q ss_pred CCCeEEEEcCCCchhHHH-HHHHHHH
Q psy3426 308 KGSIIVIVGGEDSMRQAK-FARFIVR 332 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~-~~~~L~~ 332 (360)
.+.+|+|+|..|..|+.. ++..|..
T Consensus 132 ~~~~VlVHC~aG~gRTg~~~a~~L~~ 157 (212)
T 1fpz_A 132 NYRKTLIHSYGGLGRSCLVAACLLLY 157 (212)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 467899999999766554 3444444
No 110
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=39.05 E-value=30 Score=26.40 Aligned_cols=29 Identities=17% Similarity=0.194 Sum_probs=20.0
Q ss_pred CCCeEEEEcCCCchhHHHH--HHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAKF--ARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~--~~~L~~~G~~ 336 (360)
.+.+|+|+|..|..|+..+ +..+...|.+
T Consensus 88 ~~~~vlVHC~~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 88 LGQCVYVHCKAGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp TTCEEEEESSSSSSHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 4679999999998676654 3444445664
No 111
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=38.86 E-value=33 Score=25.98 Aligned_cols=29 Identities=17% Similarity=0.146 Sum_probs=20.1
Q ss_pred CCCeEEEEcCCCchhHHHH--HHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAKF--ARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~--~~~L~~~G~~ 336 (360)
.+.+|+++|..|..|+..+ ++.+...|.+
T Consensus 82 ~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~~ 112 (149)
T 1zzw_A 82 CGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 112 (149)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 4679999999996577653 3444556653
No 112
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=38.61 E-value=7.2 Score=30.17 Aligned_cols=40 Identities=10% Similarity=0.032 Sum_probs=29.6
Q ss_pred CeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccc
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFE 349 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~ 349 (360)
..|+|+|.+...||..|...+++..-+++.+...|..+|.
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~ 44 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFH 44 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCcc
Confidence 4699999987778877777777664444667788888874
No 113
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=38.22 E-value=38 Score=28.62 Aligned_cols=31 Identities=13% Similarity=0.241 Sum_probs=24.9
Q ss_pred CeEEEEcCCCc--hhHHHHHHHHHHcCCCcEEEe
Q psy3426 310 SIIVIVGGEDS--MRQAKFARFIVRLGFPKVTYV 341 (360)
Q Consensus 310 ~~iv~~c~~g~--~~s~~~~~~L~~~G~~~v~~l 341 (360)
++|+++|..|+ +.+-.+|+.|...|++ |.++
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 91 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVF 91 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 57899998876 2778999999999996 5554
No 114
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=38.03 E-value=39 Score=25.36 Aligned_cols=38 Identities=8% Similarity=-0.018 Sum_probs=30.0
Q ss_pred CeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccc
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNS 347 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~ 347 (360)
+.|+|+|.+...||..|...+.+..-.++.+...|..+
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~~ 41 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIET 41 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSC
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCCC
Confidence 36999999887799988888887754567788888765
No 115
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=37.53 E-value=24 Score=27.71 Aligned_cols=40 Identities=10% Similarity=0.035 Sum_probs=29.7
Q ss_pred CeEEEEcCCCchhHHHHHHHHHH----cCC-CcEEEecccccccc
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVR----LGF-PKVTYVHEHVNSFE 349 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~----~G~-~~v~~l~GG~~~w~ 349 (360)
..|+|+|.+..+||..|...+++ .|. .++.+...|..+|.
T Consensus 5 ~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~ 49 (161)
T 3jvi_A 5 MKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYH 49 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTT
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcc
Confidence 47999999887777766655544 465 36888889999885
No 116
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=36.91 E-value=35 Score=26.33 Aligned_cols=38 Identities=8% Similarity=0.012 Sum_probs=29.7
Q ss_pred CeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccc
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNS 347 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~ 347 (360)
..|+|+|.+...||..|...+++..-.++.+...|...
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~ 58 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGTKP 58 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEESSC
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEecccCC
Confidence 47999999887799988888888765667777777653
No 117
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=36.86 E-value=47 Score=26.06 Aligned_cols=28 Identities=7% Similarity=0.097 Sum_probs=18.8
Q ss_pred CCeEEEEcCCCchhHHH--HHHHHHHcCCC
Q psy3426 309 GSIIVIVGGEDSMRQAK--FARFIVRLGFP 336 (360)
Q Consensus 309 ~~~iv~~c~~g~~~s~~--~~~~L~~~G~~ 336 (360)
+.+|+|+|..|..|+.. ++..+...|.+
T Consensus 108 ~~~VlVHC~aG~~RSg~~v~aylm~~~~~~ 137 (176)
T 3cm3_A 108 NEPVLVHSAAGVNRSGAMILAYLMSKNKES 137 (176)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred CCcEEEECCcCCCHHHHHHHHHHHHHhCCC
Confidence 67899999999656654 34444555654
No 118
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=36.08 E-value=38 Score=28.91 Aligned_cols=31 Identities=10% Similarity=0.203 Sum_probs=24.8
Q ss_pred CeEEEEcCCCc--hhHHHHHHHHHHcCCCcEEEe
Q psy3426 310 SIIVIVGGEDS--MRQAKFARFIVRLGFPKVTYV 341 (360)
Q Consensus 310 ~~iv~~c~~g~--~~s~~~~~~L~~~G~~~v~~l 341 (360)
.+|+++|..|+ +.+-.+|+.|...|++ |.++
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 118 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 118 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 47899998876 2778999999999996 5544
No 119
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=36.02 E-value=41 Score=27.41 Aligned_cols=41 Identities=17% Similarity=0.353 Sum_probs=32.8
Q ss_pred HHhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccc
Q psy3426 304 LFNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVN 346 (360)
Q Consensus 304 ~~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~ 346 (360)
+....+..++++|.+-. .+..++..|.+.|+. +..+.|++.
T Consensus 26 l~~~~~~~~lVF~~~~~-~~~~l~~~L~~~~~~-~~~lhg~~~ 66 (212)
T 3eaq_A 26 LYVASPDRAMVFTRTKA-ETEEIAQGLLRLGHP-AQALHGDLS 66 (212)
T ss_dssp HHHHCCSCEEEECSSHH-HHHHHHHHHHHHTCC-EEEECSSSC
T ss_pred HHhCCCCeEEEEeCCHH-HHHHHHHHHHHcCCC-EEEEECCCC
Confidence 33345678999999888 889999999999986 667888864
No 120
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=35.41 E-value=45 Score=25.09 Aligned_cols=36 Identities=19% Similarity=0.212 Sum_probs=28.9
Q ss_pred eEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccc
Q psy3426 311 IIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVN 346 (360)
Q Consensus 311 ~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~ 346 (360)
+|+|+|.+...||..|...+.+..-+++.+...|..
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 699999988889998888888776556777777765
No 121
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=35.22 E-value=39 Score=29.68 Aligned_cols=31 Identities=10% Similarity=0.203 Sum_probs=24.9
Q ss_pred CeEEEEcCCCc--hhHHHHHHHHHHcCCCcEEEe
Q psy3426 310 SIIVIVGGEDS--MRQAKFARFIVRLGFPKVTYV 341 (360)
Q Consensus 310 ~~iv~~c~~g~--~~s~~~~~~L~~~G~~~v~~l 341 (360)
.+|+++|..|+ +.+-.+|+.|...|++ |.++
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 165 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 165 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 47899998876 3778999999999995 5554
No 122
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=34.87 E-value=58 Score=29.08 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=19.3
Q ss_pred cCCCeEEEEcCCCchhHHH-HHHHHHH-cCCC
Q psy3426 307 NKGSIIVIVGGEDSMRQAK-FARFIVR-LGFP 336 (360)
Q Consensus 307 ~~~~~iv~~c~~g~~~s~~-~~~~L~~-~G~~ 336 (360)
.++.+|+|+|..|.+|+.. ++-.|.. .|.+
T Consensus 267 ~~~~~VLVHC~aG~gRTGtvvaayLm~~~g~s 298 (348)
T 1ohe_A 267 NAEGAIAVHSKAGLGRTGTLIACYIMKHYRMT 298 (348)
T ss_dssp SCSSEEEEECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred hCCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 3577999999999766553 3333333 5653
No 123
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=34.75 E-value=35 Score=26.04 Aligned_cols=29 Identities=24% Similarity=0.448 Sum_probs=19.9
Q ss_pred CCCeEEEEcCCCchhHHHH--HHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAKF--ARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~--~~~L~~~G~~ 336 (360)
.+.+|+++|..|..|+..+ +..+...|.+
T Consensus 89 ~~~~vlvHC~aG~~RS~~~~~ayl~~~~~~~ 119 (154)
T 2r0b_A 89 MGGKVLVHGNAGISRSAAFVIAYIMETFGMK 119 (154)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHTCC
T ss_pred cCCCEEEEcCCCCChHHHHHHHHHHHHcCCC
Confidence 4679999999996577743 4444456754
No 124
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=34.69 E-value=48 Score=27.07 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=26.7
Q ss_pred eEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccc
Q psy3426 311 IIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEH 344 (360)
Q Consensus 311 ~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG 344 (360)
.+.++|.+.+.||+.|=..|.+.|| +|.-+--|
T Consensus 27 r~avVCaSN~NRSMEAH~~L~k~Gf-~V~SfGTG 59 (214)
T 4h3k_B 27 RVAVVSSSNQNRSMEAHNILSKRGF-SVRSFGTG 59 (214)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHTTC-EEEEEECS
T ss_pred eEEEECCCCcchhHHHHHHHHHCCC-ceEeecCC
Confidence 5889999876699999999999999 56655433
No 125
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=33.57 E-value=43 Score=28.72 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=24.9
Q ss_pred CeEEEEcCCCc--hhHHHHHHHHHHcCCCcEEEe
Q psy3426 310 SIIVIVGGEDS--MRQAKFARFIVRLGFPKVTYV 341 (360)
Q Consensus 310 ~~iv~~c~~g~--~~s~~~~~~L~~~G~~~v~~l 341 (360)
++|+++|..|+ +.+-.+|+.|...|++ |.++
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 112 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGYQ-PTIY 112 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 47889998876 2778999999999995 6554
No 126
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=32.02 E-value=46 Score=25.53 Aligned_cols=29 Identities=10% Similarity=0.159 Sum_probs=19.7
Q ss_pred CCCeEEEEcCCCchhHHHH--HHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAKF--ARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~--~~~L~~~G~~ 336 (360)
++.+|+|+|..|..|+..+ |..+...|.+
T Consensus 84 ~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~~ 114 (155)
T 2hxp_A 84 QNCGVLVHSLAGVSRSVTVTVAYLMQKLHLS 114 (155)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHTCC
T ss_pred cCCcEEEECCCCCchhHHHHHHHHHHHcCCC
Confidence 4679999999996577643 4444455653
No 127
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=31.53 E-value=47 Score=24.93 Aligned_cols=40 Identities=15% Similarity=0.248 Sum_probs=28.8
Q ss_pred CCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccc
Q psy3426 309 GSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFE 349 (360)
Q Consensus 309 ~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~ 349 (360)
+-+|.++.+... ....+...|.+.||..|.....|..++.
T Consensus 12 ~~rILiVDD~~~-~r~~l~~~L~~~G~~~v~~a~~g~~al~ 51 (134)
T 3to5_A 12 NMKILIVDDFST-MRRIVKNLLRDLGFNNTQEADDGLTALP 51 (134)
T ss_dssp TCCEEEECSCHH-HHHHHHHHHHHTTCCCEEEESSHHHHHH
T ss_pred CCEEEEEeCCHH-HHHHHHHHHHHcCCcEEEEECCHHHHHH
Confidence 346777777766 5666777888889987777777776654
No 128
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=31.00 E-value=65 Score=24.47 Aligned_cols=13 Identities=8% Similarity=-0.077 Sum_probs=10.1
Q ss_pred EEEcCCCchhHHH
Q psy3426 313 VIVGGEDSMRQAK 325 (360)
Q Consensus 313 v~~c~~g~~~s~~ 325 (360)
+|+|..|..|+..
T Consensus 93 lVHC~aG~~Rtg~ 105 (161)
T 2i6j_A 93 LVHCVGGIGRTGT 105 (161)
T ss_dssp EEECSSSSHHHHH
T ss_pred EEECCCCCCHHHH
Confidence 9999999656554
No 129
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=30.89 E-value=72 Score=26.83 Aligned_cols=40 Identities=13% Similarity=0.141 Sum_probs=32.2
Q ss_pred cCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccccc
Q psy3426 307 NKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSF 348 (360)
Q Consensus 307 ~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w 348 (360)
.++.+|++++.+|. +..++..|...|..++.++++..-..
T Consensus 26 l~~~~VlvvG~Ggl--G~~va~~La~~Gvg~i~lvD~d~v~~ 65 (251)
T 1zud_1 26 LLDSQVLIIGLGGL--GTPAALYLAGAGVGTLVLADDDDVHL 65 (251)
T ss_dssp HHTCEEEEECCSTT--HHHHHHHHHHTTCSEEEEECCCBCCG
T ss_pred HhcCcEEEEccCHH--HHHHHHHHHHcCCCeEEEEeCCCccc
Confidence 34678888888777 66889999999999999998875443
No 130
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=29.11 E-value=69 Score=25.53 Aligned_cols=36 Identities=8% Similarity=0.212 Sum_probs=30.0
Q ss_pred CCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccc
Q psy3426 309 GSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVN 346 (360)
Q Consensus 309 ~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~ 346 (360)
+.+++++|.+.. .+..++..|.+.|+. +..+.|++.
T Consensus 54 ~~~~lVF~~~~~-~~~~l~~~L~~~g~~-~~~lhg~~~ 89 (191)
T 2p6n_A 54 PPPVLIFAEKKA-DVDAIHEYLLLKGVE-AVAIHGGKD 89 (191)
T ss_dssp CSCEEEECSCHH-HHHHHHHHHHHHTCC-EEEECTTSC
T ss_pred CCCEEEEECCHH-HHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 457899999988 899999999999986 667888864
No 131
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=28.99 E-value=51 Score=25.91 Aligned_cols=29 Identities=17% Similarity=0.146 Sum_probs=19.9
Q ss_pred CCCeEEEEcCCCchhHHHH--HHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAKF--ARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~--~~~L~~~G~~ 336 (360)
.+.+|+++|..|..|+..+ ++.+...|.+
T Consensus 86 ~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~~ 116 (177)
T 2oud_A 86 CGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 116 (177)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSCCC
T ss_pred cCCcEEEEcCCCCCchHHHHHHHHHHHcCCC
Confidence 4679999999996577653 3444445654
No 132
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=28.86 E-value=79 Score=23.83 Aligned_cols=30 Identities=17% Similarity=0.123 Sum_probs=19.7
Q ss_pred cCCCeEEEEcCCCchhHHH-HHHHHHHcCCC
Q psy3426 307 NKGSIIVIVGGEDSMRQAK-FARFIVRLGFP 336 (360)
Q Consensus 307 ~~~~~iv~~c~~g~~~s~~-~~~~L~~~G~~ 336 (360)
.++.+|+|+|..|.+|+.. ++..|...|.+
T Consensus 94 ~~~~~vlVHC~aG~~Rtg~~~a~~l~~~~~~ 124 (159)
T 1rxd_A 94 EPGCCIAVHCVAGLGRAPVLVALALIEGGMK 124 (159)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHHHHHTTCC
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 3467999999999766554 44444445653
No 133
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=27.61 E-value=45 Score=24.08 Aligned_cols=28 Identities=11% Similarity=0.099 Sum_probs=19.4
Q ss_pred CCeEEEEcCCCchhHHHHH----HHHHHcCCC
Q psy3426 309 GSIIVIVGGEDSMRQAKFA----RFIVRLGFP 336 (360)
Q Consensus 309 ~~~iv~~c~~g~~~s~~~~----~~L~~~G~~ 336 (360)
-+.|+++|++|...|..++ ..+.+.|++
T Consensus 18 ~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 18 MVKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 4579999999985555555 345566876
No 134
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=27.13 E-value=49 Score=26.02 Aligned_cols=42 Identities=14% Similarity=0.196 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCCch-hHHHHHHHHHH---cCCCcEEEecccccccc
Q psy3426 308 KGSIIVIVGGEDSM-RQAKFARFIVR---LGFPKVTYVHEHVNSFE 349 (360)
Q Consensus 308 ~~~~iv~~c~~g~~-~s~~~~~~L~~---~G~~~v~~l~GG~~~w~ 349 (360)
++..+|+.+..|.. .|...|..|.+ .|..++..+-||-.|..
T Consensus 73 ~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~Gl~ 118 (163)
T 4fak_A 73 PQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLH 118 (163)
T ss_dssp TTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTTBCC
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCCccC
Confidence 35678888887763 78888888876 58889999999966543
No 135
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=27.13 E-value=76 Score=27.39 Aligned_cols=33 Identities=15% Similarity=0.212 Sum_probs=26.4
Q ss_pred CCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEec
Q psy3426 308 KGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVH 342 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~ 342 (360)
+++++++++.+|. +..++..|.+.|.++|.+..
T Consensus 121 ~~k~vlvlGaGGa--araia~~L~~~G~~~v~v~n 153 (282)
T 3fbt_A 121 KNNICVVLGSGGA--ARAVLQYLKDNFAKDIYVVT 153 (282)
T ss_dssp TTSEEEEECSSTT--HHHHHHHHHHTTCSEEEEEE
T ss_pred cCCEEEEECCcHH--HHHHHHHHHHcCCCEEEEEe
Confidence 4678888888665 77888899999998888664
No 136
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=26.78 E-value=65 Score=27.58 Aligned_cols=33 Identities=15% Similarity=0.295 Sum_probs=26.5
Q ss_pred CCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEec
Q psy3426 308 KGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVH 342 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~ 342 (360)
+++++++.+.+|. +..++..|.+.|..++.+..
T Consensus 124 ~~~~~lilGaGGa--arai~~aL~~~g~~~i~i~n 156 (269)
T 3tum_A 124 AGKRALVIGCGGV--GSAIAYALAEAGIASITLCD 156 (269)
T ss_dssp TTCEEEEECCSHH--HHHHHHHHHHTTCSEEEEEC
T ss_pred ccCeEEEEecHHH--HHHHHHHHHHhCCCeEEEeC
Confidence 4678888887776 77788889999999888764
No 137
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=26.77 E-value=51 Score=24.55 Aligned_cols=27 Identities=15% Similarity=0.048 Sum_probs=18.4
Q ss_pred CCeEEEEcCCCchhHHHHHHHH----HHcCC
Q psy3426 309 GSIIVIVGGEDSMRQAKFARFI----VRLGF 335 (360)
Q Consensus 309 ~~~iv~~c~~g~~~s~~~~~~L----~~~G~ 335 (360)
-+.|+++|++|.+.|..++..| .+.|+
T Consensus 13 ~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 13 VRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred ccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 3579999999985555545444 45677
No 138
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=26.63 E-value=67 Score=24.78 Aligned_cols=29 Identities=10% Similarity=0.198 Sum_probs=20.2
Q ss_pred CCCeEEEEcCCCchhHHH--HHHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAK--FARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~--~~~~L~~~G~~ 336 (360)
++..|+|+|..|..||.. +|+.+...|.+
T Consensus 86 ~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s 116 (161)
T 3emu_A 86 RKEGVLIISGTGVNKAPAIVIAFLMYYQRLS 116 (161)
T ss_dssp TTCEEEEEESSSSSHHHHHHHHHHHHHTTCC
T ss_pred cCCeEEEEcCCCCcHHHHHHHHHHHHHhCCC
Confidence 467999999999766543 45555566754
No 139
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=26.33 E-value=80 Score=24.20 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=28.1
Q ss_pred CeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccc
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNS 347 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~ 347 (360)
++|+|+|.+...||..|...+++.. ..+.+...|..+
T Consensus 9 ~~VLFVC~gN~cRSpmAEal~r~~~-~~~~v~SAGt~~ 45 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA 45 (150)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTSEEEEEETTC
T ss_pred CEEEEEcCCchHHHHHHHHHHHHhc-CCCEEEeccccC
Confidence 3799999988779998888887764 336677777755
No 140
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=26.32 E-value=72 Score=26.00 Aligned_cols=44 Identities=18% Similarity=0.145 Sum_probs=29.4
Q ss_pred CCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccccccCccc
Q psy3426 309 GSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSFECYGVL 354 (360)
Q Consensus 309 ~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w~~~gl~ 354 (360)
.+++++|+.+|. +..++..|.+.||+-+..++.....+.-.|++
T Consensus 12 ~k~v~IiGAGg~--g~~v~~~l~~~~~~~vgfiDd~~~~~~~~g~~ 55 (220)
T 4ea9_A 12 IGGVVIIGGGGH--AKVVIESLRACGETVAAIVDADPTRRAVLGVP 55 (220)
T ss_dssp SSCEEEECCSHH--HHHHHHHHHHTTCCEEEEECSCC---CBTTBC
T ss_pred CCCEEEEcCCHH--HHHHHHHHHhCCCEEEEEEeCCcccCcCCCee
Confidence 357999998887 77788888888988777777654333233443
No 141
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=26.01 E-value=52 Score=23.92 Aligned_cols=27 Identities=19% Similarity=0.187 Sum_probs=18.3
Q ss_pred CeEEEEcCCCchhHHHHHHHH----HHcCCC
Q psy3426 310 SIIVIVGGEDSMRQAKFARFI----VRLGFP 336 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L----~~~G~~ 336 (360)
+.|++.|++|...|..++..+ .+.|++
T Consensus 22 kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp EEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 479999999984444445544 456775
No 142
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=25.21 E-value=69 Score=28.53 Aligned_cols=40 Identities=20% Similarity=0.398 Sum_probs=32.7
Q ss_pred cCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccccc
Q psy3426 307 NKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSF 348 (360)
Q Consensus 307 ~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w 348 (360)
.++.+|++++.+|- +..++..|...|+.++.+++++....
T Consensus 32 L~~~~VlIvGaGGl--Gs~va~~La~aGVg~ItlvD~D~Ve~ 71 (340)
T 3rui_A 32 IKNTKVLLLGAGTL--GCYVSRALIAWGVRKITFVDNGTVSY 71 (340)
T ss_dssp HHTCEEEEECCSHH--HHHHHHHHHHTTCCEEEEECCCBCCT
T ss_pred HhCCEEEEECCCHH--HHHHHHHHHHcCCCEEEEecCCEecc
Confidence 35678888888777 77789999999999999999876443
No 143
>1puz_A Conserved hypothetical protein; NMA1147, MR19, structural genomics, PSI, protein structure initiative; NMR {Neisseria meningitidis} SCOP: a.218.1.1
Probab=24.72 E-value=1.5e+02 Score=20.12 Aligned_cols=28 Identities=29% Similarity=0.407 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHcHHHHHHHHhcCCCCc
Q psy3426 93 YLSKFSHLIAFHDAELANHMSEINFIPE 120 (360)
Q Consensus 93 ~~~~~~~lL~~~dp~L~~hL~~~~~~~~ 120 (360)
....|+.+|...||+||..+....-.|.
T Consensus 42 el~~f~~LL~~~D~DL~~w~~g~~~~p~ 69 (82)
T 1puz_A 42 ELSEFSEILEFQDQELLALINGHSETDK 69 (82)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHTCSCCSC
T ss_pred HHHHHHHHHcCCCHHHHHHHhCCCCCCC
Confidence 5577899999999999999998776655
No 144
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=24.64 E-value=90 Score=26.67 Aligned_cols=33 Identities=15% Similarity=0.246 Sum_probs=25.7
Q ss_pred CCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEec
Q psy3426 308 KGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVH 342 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~ 342 (360)
.++++++++.+|. +..++..|.+.|.++|.+..
T Consensus 118 ~~~~vlvlGaGga--arav~~~L~~~G~~~i~v~n 150 (271)
T 1npy_A 118 KNAKVIVHGSGGM--AKAVVAAFKNSGFEKLKIYA 150 (271)
T ss_dssp TTSCEEEECSSTT--HHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEEECCcHH--HHHHHHHHHHCCCCEEEEEe
Confidence 3467888887776 77778888899998888764
No 145
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=23.26 E-value=74 Score=26.15 Aligned_cols=29 Identities=17% Similarity=0.177 Sum_probs=20.0
Q ss_pred CCCeEEEEcCCCchhHHH--HHHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAK--FARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~--~~~~L~~~G~~ 336 (360)
.+.+|+|+|..|..|+.. +|+.+...|.+
T Consensus 138 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s 168 (219)
T 2y96_A 138 DHSKILVHCVMGRSRSATLVLAYLMIHKDMT 168 (219)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 467899999999657664 34455556653
No 146
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=23.16 E-value=93 Score=24.43 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=28.2
Q ss_pred CeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccc
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNS 347 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~ 347 (360)
+.|+|+|.+..+||..|...+++.. +++.+...|..+
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~-~~~~v~SAGt~~ 63 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA 63 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHS-TTSEEEEEETTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecCC
Confidence 4799999988779998888887764 346677777754
No 147
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=23.00 E-value=1.3e+02 Score=23.01 Aligned_cols=89 Identities=13% Similarity=0.093 Sum_probs=42.5
Q ss_pred cccCHHHHHHHhhhcCCCCCEEEEEcCCccchhh-----ccc--cc--cccccCCCcccCccCCCCCCCCC-hhhhhHHh
Q psy3426 237 SSLSSTDLLDLINTRFKKPKVLVIDIRDNEEYVA-----ESI--IG--SINIPLARIPDLESTDLGSMESS-PEMNILFN 306 (360)
Q Consensus 237 ~~is~~~l~~~~~~~~~~~~~~iiDvR~~~e~~~-----ghI--pg--A~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 306 (360)
..++++.+..+. ..+--++|+.|+..+-.. ..+ .| ++++|.+ +. ....+.. .....+..
T Consensus 26 ~~p~~a~a~~La----~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~D-v~------~~~~~~v~~~~~~i~~ 94 (157)
T 3gxh_A 26 GLPNEQQFSLLK----QAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVD-WQ------NPKVEDVEAFFAAMDQ 94 (157)
T ss_dssp BCCCHHHHHHHH----HTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCC-TT------SCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHH----HcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCC-CC------CCCHHHHHHHHHHHHh
Confidence 356777776665 223346778886543210 011 12 4556653 21 1100111 11223333
Q ss_pred cCCCeEEEEcCCCchhHHHHHHHHHHcCCC
Q psy3426 307 NKGSIIVIVGGEDSMRQAKFARFIVRLGFP 336 (360)
Q Consensus 307 ~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~ 336 (360)
..+++|+|.|.++..++...+..+...|.+
T Consensus 95 ~~G~dVLVnnAgg~r~~~l~~~~~~~~G~~ 124 (157)
T 3gxh_A 95 HKGKDVLVHCLANYRASAFAYLYQLKQGQN 124 (157)
T ss_dssp TTTSCEEEECSBSHHHHHHHHHHHHHTTCC
T ss_pred cCCCCEEEECCCCCCHHHHHHHHHHHcCCC
Confidence 234489999998872333334444556654
No 148
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=22.92 E-value=74 Score=24.76 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=29.6
Q ss_pred CCeEEEEcCCCch-hHHHHHHHHHHc---CCCcEEEecccccccc
Q psy3426 309 GSIIVIVGGEDSM-RQAKFARFIVRL---GFPKVTYVHEHVNSFE 349 (360)
Q Consensus 309 ~~~iv~~c~~g~~-~s~~~~~~L~~~---G~~~v~~l~GG~~~w~ 349 (360)
+..+|+.+..|.. .|...|..|.+. | .++..+-||-.++.
T Consensus 66 ~~~vi~Ld~~Gk~~sS~~fA~~l~~~~~~g-~~i~FvIGG~~Gl~ 109 (155)
T 1ns5_A 66 KNRIVTLDIPGKPWDTPQLAAELERWKLDG-RDVSLLIGGPEGLS 109 (155)
T ss_dssp TSEEEEEEEEEECCCHHHHHHHHHHHHHHC-SCEEEEECBTTBCC
T ss_pred CCcEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECCCCCC
Confidence 3468888887763 777788777654 8 78999999976654
No 149
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=22.78 E-value=78 Score=27.76 Aligned_cols=33 Identities=12% Similarity=0.307 Sum_probs=25.6
Q ss_pred CCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEec
Q psy3426 308 KGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVH 342 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~ 342 (360)
+++++++.+.+| .+..++..|.+.|.++|.+..
T Consensus 147 ~gk~~lVlGAGG--aaraia~~L~~~G~~~v~v~n 179 (312)
T 3t4e_A 147 RGKTMVLLGAGG--AATAIGAQAAIEGIKEIKLFN 179 (312)
T ss_dssp TTCEEEEECCSH--HHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCEEEEECcCH--HHHHHHHHHHHcCCCEEEEEE
Confidence 467888887744 478888999999998888764
No 150
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=22.76 E-value=94 Score=29.35 Aligned_cols=41 Identities=12% Similarity=0.157 Sum_probs=33.8
Q ss_pred HHhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccc
Q psy3426 304 LFNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVN 346 (360)
Q Consensus 304 ~~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~ 346 (360)
+...++..+++||.+.. .+..++..|.+.|+. +..+.||+.
T Consensus 231 l~~~~~~~~IVf~~sr~-~~e~l~~~L~~~g~~-~~~~h~~l~ 271 (523)
T 1oyw_A 231 VQEQRGKSGIIYCNSRA-KVEDTAARLQSKGIS-AAAYHAGLE 271 (523)
T ss_dssp HHHTTTCCEEEECSSHH-HHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred HHhcCCCcEEEEeCCHH-HHHHHHHHHHHCCCC-EEEecCCCC
Confidence 33445678999999998 899999999999985 777889875
No 151
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=22.65 E-value=60 Score=25.63 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=31.0
Q ss_pred CCeEEEEcCCCch-hHHHHHHHHHH---cCCCcEEEecccccccc
Q psy3426 309 GSIIVIVGGEDSM-RQAKFARFIVR---LGFPKVTYVHEHVNSFE 349 (360)
Q Consensus 309 ~~~iv~~c~~g~~-~s~~~~~~L~~---~G~~~v~~l~GG~~~w~ 349 (360)
+..+|+.+..|.. .|...|..|.+ .|..++..+-||-.|+.
T Consensus 70 ~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~~i~FvIGGa~Gl~ 114 (167)
T 1to0_A 70 DAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGGSLGLS 114 (167)
T ss_dssp TSEEEEEEEEEEECCHHHHHHHHHHHHTTTCCEEEEEECCSSCCC
T ss_pred CCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCceEEEEEECCCCCC
Confidence 3457888887763 78888888876 57788999999976654
No 152
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=22.57 E-value=56 Score=24.11 Aligned_cols=36 Identities=8% Similarity=0.014 Sum_probs=25.9
Q ss_pred eEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccc
Q psy3426 311 IIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNS 347 (360)
Q Consensus 311 ~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~ 347 (360)
+|+|+|.+...||..|...+.+..- ++.+...|..+
T Consensus 1 ~VLFVC~gN~cRSpmAEa~~~~~~~-~~~v~SAGt~~ 36 (124)
T 1y1l_A 1 KVLFVCIHNTARSVMAEALFNAMAK-SWKAESAGVEK 36 (124)
T ss_dssp CEEEEESSCSSHHHHHHHHHHTTCS-SCCEEEEESSC
T ss_pred CEEEEeCCChhHHHHHHHHHHHhcC-CEEEEecCCCC
Confidence 3788998877789888888877643 55566666654
No 153
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=22.51 E-value=1.1e+02 Score=24.02 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=28.3
Q ss_pred CeEEEEcCCCchhHHHHHHHHHHcCCCcEEEecccccc
Q psy3426 310 SIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNS 347 (360)
Q Consensus 310 ~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~ 347 (360)
+.|+|+|.+..+||..|...+++.. +.+.+...|..+
T Consensus 23 ~~VLFVCtgN~cRSpmAEal~r~~~-~~~~v~SAGt~~ 59 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAERLLQRYH-PELKVESAGLGA 59 (167)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTCEEEEEETTC
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecCC
Confidence 3799999988779998888887764 346777777755
No 154
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=22.31 E-value=80 Score=25.14 Aligned_cols=29 Identities=21% Similarity=0.130 Sum_probs=20.1
Q ss_pred CCCeEEEEcCCCchhHHH--HHHHHHHcCCC
Q psy3426 308 KGSIIVIVGGEDSMRQAK--FARFIVRLGFP 336 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~--~~~~L~~~G~~ 336 (360)
++..|+|+|..|..||.. +|+.+...|.+
T Consensus 116 ~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~s 146 (182)
T 2j16_A 116 KREKILIHAQCGLSRSATLIIAYIMKYHNLS 146 (182)
T ss_dssp TTCCEEEEESSCCSHHHHHHHHHHHHHTTCC
T ss_pred cCCeEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 577899999999766654 44555555653
No 155
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=22.25 E-value=88 Score=26.93 Aligned_cols=33 Identities=24% Similarity=0.223 Sum_probs=25.7
Q ss_pred CCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEec
Q psy3426 308 KGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVH 342 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~ 342 (360)
+++.+++.+.+ . .+..++..|.+.|.++|.+..
T Consensus 126 ~~k~vlVlGaG-G-~g~aia~~L~~~G~~~v~i~~ 158 (283)
T 3jyo_A 126 KLDSVVQVGAG-G-VGNAVAYALVTHGVQKLQVAD 158 (283)
T ss_dssp CCSEEEEECCS-H-HHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEECCc-H-HHHHHHHHHHHCCCCEEEEEE
Confidence 56788888875 4 477788889999998888764
No 156
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=22.23 E-value=95 Score=23.61 Aligned_cols=28 Identities=14% Similarity=-0.028 Sum_probs=18.5
Q ss_pred CCeEEEEcCCCchhHHH-HHHHHHHc-CCC
Q psy3426 309 GSIIVIVGGEDSMRQAK-FARFIVRL-GFP 336 (360)
Q Consensus 309 ~~~iv~~c~~g~~~s~~-~~~~L~~~-G~~ 336 (360)
+.+|+|+|..|.+|+.. ++..|... |.+
T Consensus 109 ~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~ 138 (167)
T 3s4o_A 109 PPTIGVHCVAGLGRAPILVALALVEYGNVS 138 (167)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 67999999999765543 44444444 553
No 157
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=21.90 E-value=90 Score=26.69 Aligned_cols=33 Identities=6% Similarity=0.133 Sum_probs=25.1
Q ss_pred CCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEec
Q psy3426 308 KGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVH 342 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~ 342 (360)
+++.+++.+.+| .+..++..|.+.|..+|.+..
T Consensus 119 ~~k~~lvlGaGg--~~~aia~~L~~~G~~~v~i~~ 151 (272)
T 3pwz_A 119 RNRRVLLLGAGG--AVRGALLPFLQAGPSELVIAN 151 (272)
T ss_dssp TTSEEEEECCSH--HHHHHHHHHHHTCCSEEEEEC
T ss_pred cCCEEEEECccH--HHHHHHHHHHHcCCCEEEEEe
Confidence 467788887754 477788889999988887653
No 158
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=21.22 E-value=1.2e+02 Score=26.63 Aligned_cols=41 Identities=22% Similarity=0.230 Sum_probs=32.9
Q ss_pred HHhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccc
Q psy3426 304 LFNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVN 346 (360)
Q Consensus 304 ~~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~ 346 (360)
+...++.+++++|.+-. .+..++..|.+.|+. +..+.||+.
T Consensus 245 l~~~~~~~~lvf~~~~~-~~~~l~~~L~~~~~~-~~~~~~~~~ 285 (391)
T 1xti_A 245 LDVLEFNQVVIFVKSVQ-RCIALAQLLVEQNFP-AIAIHRGMP 285 (391)
T ss_dssp HHHSCCSEEEEECSCHH-HHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred HHhcCCCcEEEEeCcHH-HHHHHHHHHHhCCCc-EEEEeCCCC
Confidence 33345678999999988 899999999999986 666888764
No 159
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=21.12 E-value=87 Score=27.50 Aligned_cols=33 Identities=12% Similarity=0.176 Sum_probs=25.7
Q ss_pred CCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEec
Q psy3426 308 KGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVH 342 (360)
Q Consensus 308 ~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~ 342 (360)
+++.+++.+.+ . .+..++..|.+.|.++|.+..
T Consensus 153 ~gk~~lVlGaG-G-~g~aia~~L~~~Ga~~V~i~n 185 (315)
T 3tnl_A 153 IGKKMTICGAG-G-AATAICIQAALDGVKEISIFN 185 (315)
T ss_dssp TTSEEEEECCS-H-HHHHHHHHHHHTTCSEEEEEE
T ss_pred cCCEEEEECCC-h-HHHHHHHHHHHCCCCEEEEEE
Confidence 46788888874 4 578888999999998888653
No 160
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=20.74 E-value=84 Score=22.67 Aligned_cols=30 Identities=13% Similarity=0.109 Sum_probs=20.8
Q ss_pred CCeEEEEcCCCchhHHHHHHHHHH----cCCCcEEE
Q psy3426 309 GSIIVIVGGEDSMRQAKFARFIVR----LGFPKVTY 340 (360)
Q Consensus 309 ~~~iv~~c~~g~~~s~~~~~~L~~----~G~~~v~~ 340 (360)
..+|++.|.+|. .+...+..+++ .|.+ +.+
T Consensus 6 ~mkIlL~C~aGm-STsllv~km~~~a~~~gi~-v~i 39 (108)
T 3nbm_A 6 ELKVLVLCAGSG-TSAQLANAINEGANLTEVR-VIA 39 (108)
T ss_dssp CEEEEEEESSSS-HHHHHHHHHHHHHHHHTCS-EEE
T ss_pred CceEEEECCCCC-CHHHHHHHHHHHHHHCCCc-eEE
Confidence 447999999998 66666666654 4775 444
No 161
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=20.62 E-value=1.2e+02 Score=23.96 Aligned_cols=39 Identities=10% Similarity=0.147 Sum_probs=28.5
Q ss_pred eEEEEcCCCchhHHHHHHHHH----HcCCC-cEEEecccccccc
Q psy3426 311 IIVIVGGEDSMRQAKFARFIV----RLGFP-KVTYVHEHVNSFE 349 (360)
Q Consensus 311 ~iv~~c~~g~~~s~~~~~~L~----~~G~~-~v~~l~GG~~~w~ 349 (360)
.|+|+|.+..+||..|-..|+ +.|.. ++.+-..|..+|.
T Consensus 20 kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~ 63 (173)
T 4etm_A 20 SVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWH 63 (173)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTT
T ss_pred EEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccCC
Confidence 799999887668876655554 34664 5788888988885
No 162
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=20.53 E-value=88 Score=27.15 Aligned_cols=40 Identities=18% Similarity=0.170 Sum_probs=31.5
Q ss_pred cCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccccc
Q psy3426 307 NKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSF 348 (360)
Q Consensus 307 ~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w 348 (360)
.++.+|++++.+|- ...++..|...|+.++.++++..-.+
T Consensus 34 L~~~~VlVvGaGGl--Gs~va~~La~aGVG~i~lvD~D~Ve~ 73 (292)
T 3h8v_A 34 IRTFAVAIVGVGGV--GSVTAEMLTRCGIGKLLLFDYDKVEL 73 (292)
T ss_dssp GGGCEEEEECCSHH--HHHHHHHHHHHTCSEEEEECCCBC--
T ss_pred HhCCeEEEECcCHH--HHHHHHHHHHcCCCEEEEECCCccCh
Confidence 34678888888777 67789999999999999999876544
No 163
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=20.32 E-value=1e+02 Score=26.66 Aligned_cols=39 Identities=15% Similarity=0.292 Sum_probs=31.7
Q ss_pred hcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccc
Q psy3426 306 NNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVN 346 (360)
Q Consensus 306 ~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~ 346 (360)
...+.+++++|.+-. .+..++..|.+.|+. +..+.|++.
T Consensus 25 ~~~~~~~LVF~~t~~-~~~~l~~~L~~~g~~-~~~lhg~l~ 63 (300)
T 3i32_A 25 VASPDRAMVFTRTKA-ETEEIAQGLLRLGHP-AQALHGDMS 63 (300)
T ss_dssp HHCCSSEEEECSSHH-HHHHHHHHHHTTTCC-EEEECSCCC
T ss_pred hcCCCCEEEEECCHH-HHHHHHHHHHhCCCC-EEEEeCCCC
Confidence 334678999999988 889999999999985 667888864
No 164
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=20.18 E-value=1.3e+02 Score=26.76 Aligned_cols=40 Identities=20% Similarity=0.297 Sum_probs=32.6
Q ss_pred HhcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccc
Q psy3426 305 FNNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVN 346 (360)
Q Consensus 305 ~~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~ 346 (360)
...++..++++|.+-. .+..++..|.+.|+. +..+.||+.
T Consensus 254 ~~~~~~~~lVf~~~~~-~~~~l~~~L~~~~~~-~~~~~~~~~ 293 (400)
T 1s2m_A 254 SKLQINQAIIFCNSTN-RVELLAKKITDLGYS-CYYSHARMK 293 (400)
T ss_dssp HHSCCSEEEEECSSHH-HHHHHHHHHHHHTCC-EEEECTTSC
T ss_pred hhcCCCcEEEEEecHH-HHHHHHHHHHhcCCC-eEEecCCCC
Confidence 3345678999999988 899999999999985 677888864
No 165
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=20.13 E-value=84 Score=28.06 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=32.7
Q ss_pred hcCCCeEEEEcCCCchhHHHHHHHHHHcCCCcEEEeccccccc
Q psy3426 306 NNKGSIIVIVGGEDSMRQAKFARFIVRLGFPKVTYVHEHVNSF 348 (360)
Q Consensus 306 ~~~~~~iv~~c~~g~~~s~~~~~~L~~~G~~~v~~l~GG~~~w 348 (360)
+.++.+|++++.+|- +..++..|...|..++.++++.....
T Consensus 115 ~L~~~~VlvvG~Ggl--Gs~va~~La~aGvg~i~lvD~D~Ve~ 155 (353)
T 3h5n_A 115 KLKNAKVVILGCGGI--GNHVSVILATSGIGEIILIDNDQIEN 155 (353)
T ss_dssp HHHTCEEEEECCSHH--HHHHHHHHHHHTCSEEEEEECCBCCG
T ss_pred HHhCCeEEEECCCHH--HHHHHHHHHhCCCCeEEEECCCcCcc
Confidence 334678888888776 66789999999999999999876544
Done!