RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3428
(682 letters)
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 300
Score = 59.4 bits (143), Expect = 3e-10
Identities = 11/68 (16%), Positives = 34/68 (50%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+ +N + ++ +E ++ E+ E + + +E+E + +E+E+ +E ++E
Sbjct: 227 QRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKES 286
Query: 647 EEEEEEVR 654
+ E++
Sbjct: 287 RIMKNEIQ 294
Score = 59.0 bits (142), Expect = 4e-10
Identities = 12/62 (19%), Positives = 32/62 (51%)
Query: 593 QLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
+ + E++E +E ++ E+ E + ++ +E+E + +E+E+ +E ++E
Sbjct: 226 MQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKE 285
Query: 653 VR 654
R
Sbjct: 286 SR 287
Score = 57.8 bits (139), Expect = 1e-09
Identities = 12/66 (18%), Positives = 32/66 (48%)
Query: 589 ENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEE 648
E + + E++E +E ++ E+ E + + + QE + +E+E+ +E ++
Sbjct: 225 EMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQK 284
Query: 649 EEEEVR 654
E ++
Sbjct: 285 ESRIMK 290
Score = 57.1 bits (137), Expect = 2e-09
Identities = 11/62 (17%), Positives = 32/62 (51%)
Query: 593 QLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
Q R + ++ E+ E + + +E+E ++ +E+E+ +E ++E + E ++
Sbjct: 236 QKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQD 295
Query: 653 VR 654
++
Sbjct: 296 LQ 297
Score = 55.9 bits (134), Expect = 4e-09
Identities = 9/65 (13%), Positives = 29/65 (44%)
Query: 589 ENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEE 648
+ ++ E+ E + + +E+E + + QE+ +E ++E + E ++
Sbjct: 236 QKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQD 295
Query: 649 EEEEV 653
+ ++
Sbjct: 296 LQTKM 300
Score = 55.9 bits (134), Expect = 5e-09
Identities = 15/69 (21%), Positives = 35/69 (50%)
Query: 593 QLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
++ R+ E+ E++E +E ++ E+ E + +E+E + +E+E+ +E ++
Sbjct: 225 EMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQK 284
Query: 653 VRGGGKEEI 661
K EI
Sbjct: 285 ESRIMKNEI 293
Score = 54.4 bits (130), Expect = 1e-08
Identities = 9/66 (13%), Positives = 30/66 (45%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+E + + ++ E+ E + + +E+E + ++E+ +E ++E + E
Sbjct: 233 MMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNE 292
Query: 647 EEEEEE 652
++ +
Sbjct: 293 IQDLQT 298
Score = 54.0 bits (129), Expect = 2e-08
Identities = 10/73 (13%), Positives = 32/73 (43%)
Query: 573 KVWKTSDQDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEE 632
+ ++ E++ QL + E + + +E+E + +E+E+ + ++E
Sbjct: 227 QRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKES 286
Query: 633 EEEEEEEEEEEEE 645
+ E ++ + +
Sbjct: 287 RIMKNEIQDLQTK 299
Score = 53.2 bits (127), Expect = 3e-08
Identities = 13/75 (17%), Positives = 36/75 (48%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+ E+ + + + E+ E++E +E ++ E E + + +E+E +
Sbjct: 212 KAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKL 271
Query: 647 EEEEEEVRGGGKEEI 661
+E+E+ ++ G ++E
Sbjct: 272 QEQEQLLKEGFQKES 286
Score = 52.8 bits (126), Expect = 4e-08
Identities = 14/68 (20%), Positives = 31/68 (45%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
I Q + E+E E E + E + + E + + ++ E++E +E ++ E
Sbjct: 191 AILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTE 250
Query: 647 EEEEEEVR 654
+ E + V+
Sbjct: 251 KMENDRVQ 258
Score = 52.8 bits (126), Expect = 5e-08
Identities = 14/78 (17%), Positives = 34/78 (43%)
Query: 575 WKTSDQDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEE 634
T + EI R++ E + + E+ E++E +E ++ ++ E +
Sbjct: 198 TLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRV 257
Query: 635 EEEEEEEEEEEEEEEEEE 652
+ +E+E + +E+E
Sbjct: 258 QLLKEQERTLALKLQEQE 275
Score = 52.1 bits (124), Expect = 9e-08
Identities = 13/74 (17%), Positives = 32/74 (43%)
Query: 579 DQDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEE 638
D+ + + + I + E + + E + + E+ E++E QE ++ E+ E
Sbjct: 194 QTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKME 253
Query: 639 EEEEEEEEEEEEEE 652
+ + +E+E
Sbjct: 254 NDRVQLLKEQERTL 267
Score = 51.7 bits (123), Expect = 1e-07
Identities = 14/81 (17%), Positives = 35/81 (43%)
Query: 580 QDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEE 639
Q + E I++ R + + E + + E+ E++E +E ++ E+ E
Sbjct: 194 QTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKME 253
Query: 640 EEEEEEEEEEEEEVRGGGKEE 660
+ + +E+E + +E+
Sbjct: 254 NDRVQLLKEQERTLALKLQEQ 274
Score = 50.9 bits (121), Expect = 2e-07
Identities = 12/80 (15%), Positives = 30/80 (37%)
Query: 573 KVWKTSDQDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEE 632
+ +T IE + + E + + E+ E++E +E ++ E
Sbjct: 191 AILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTE 250
Query: 633 EEEEEEEEEEEEEEEEEEEE 652
+ E + + +E+E +
Sbjct: 251 KMENDRVQLLKEQERTLALK 270
Score = 47.8 bits (113), Expect = 2e-06
Identities = 14/64 (21%), Positives = 31/64 (48%)
Query: 589 ENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEE 648
+ I+Q + +E+E E E + E + + E ++ E+ E++E +E ++
Sbjct: 190 DAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLT 249
Query: 649 EEEE 652
E+ E
Sbjct: 250 EKME 253
Score = 44.7 bits (105), Expect = 2e-05
Identities = 13/66 (19%), Positives = 32/66 (48%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
E++ I + ++ E+E+E E E + E + + + E + + E+ E++E +E
Sbjct: 184 SKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQE 243
Query: 647 EEEEEE 652
++
Sbjct: 244 HLKQLT 249
Score = 43.6 bits (102), Expect = 5e-05
Identities = 11/65 (16%), Positives = 30/65 (46%)
Query: 588 IENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEE 647
+++ + + ++ E+E+E E E + E + + E + + E+ E++E
Sbjct: 182 LKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSY 241
Query: 648 EEEEE 652
+E +
Sbjct: 242 QEHLK 246
Score = 41.3 bits (96), Expect = 2e-04
Identities = 11/66 (16%), Positives = 27/66 (40%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+ + + ++ E+E+E E E + E + + E + + E+ E++E
Sbjct: 180 TYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKER 239
Query: 647 EEEEEE 652
+E
Sbjct: 240 SYQEHL 245
Score = 41.3 bits (96), Expect = 2e-04
Identities = 14/80 (17%), Positives = 34/80 (42%)
Query: 573 KVWKTSDQDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEE 632
+ K ++ + E I+Q + + + + ++ E+E+E E E E +
Sbjct: 159 DLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQA 218
Query: 633 EEEEEEEEEEEEEEEEEEEE 652
+ E + + E+ E++E
Sbjct: 219 SAKMLHEMQRKNEQMMEQKE 238
Score = 40.9 bits (95), Expect = 4e-04
Identities = 13/66 (19%), Positives = 28/66 (42%)
Query: 589 ENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEE 648
I +E + + ++ E+E+E E E V+ E + + E + + E+
Sbjct: 174 AEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQM 233
Query: 649 EEEEVR 654
E++ R
Sbjct: 234 MEQKER 239
Score = 40.9 bits (95), Expect = 4e-04
Identities = 11/63 (17%), Positives = 28/63 (44%)
Query: 599 EREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGGK 658
+ +E + + ++ E+E+E E E + E + + E + + E+ E+ +
Sbjct: 183 KSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQ 242
Query: 659 EEI 661
E +
Sbjct: 243 EHL 245
Score = 26.6 bits (58), Expect = 9.3
Identities = 9/69 (13%), Positives = 29/69 (42%), Gaps = 9/69 (13%)
Query: 593 QLIRRGEREEEEEEEEEEEEEEEEEE---------EEEEEEEVQEEEEEEEEEEEEEEEE 643
Q+ ++ + E +E + + E E ++ + Q+E + E++ ++ +
Sbjct: 55 QMGQKVQLPTESLQELLDLHRDSEREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCK 114
Query: 644 EEEEEEEEE 652
+ +E +
Sbjct: 115 QNQEASSDR 123
>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 138
Score = 54.1 bits (130), Expect = 2e-09
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 593 QLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEE--EEEEEEE 650
L + E E E ++ EE + +E+ + E +E E E +E+++
Sbjct: 68 HLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHA 127
Query: 651 EEVR 654
EEVR
Sbjct: 128 EEVR 131
Score = 53.7 bits (129), Expect = 3e-09
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 596 RRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
++ E EE + +E E + E+ E E EV ++ EE + +E+ ++ E
Sbjct: 49 KKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESN 105
Score = 53.0 bits (127), Expect = 5e-09
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 596 RRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
RR +E E + E+ E E E ++ EE + +E+ ++ E +E E
Sbjct: 57 RRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHL 113
Score = 52.6 bits (126), Expect = 6e-09
Identities = 14/74 (18%), Positives = 31/74 (41%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
++E + + E E + E+ E E E ++ EE + +E+ ++ E +E
Sbjct: 50 KLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENR 109
Query: 647 EEEEEEVRGGGKEE 660
E + +E+
Sbjct: 110 EAHLAAMLERLQEK 123
Score = 52.2 bits (125), Expect = 9e-09
Identities = 11/60 (18%), Positives = 26/60 (43%)
Query: 593 QLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
+ + E + +E+ ++ E +E E E +E+++ EE + +E +E
Sbjct: 79 VIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 51.8 bits (124), Expect = 1e-08
Identities = 14/64 (21%), Positives = 27/64 (42%)
Query: 589 ENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEE 648
E I + + E + +E E + E+ E E E + EE + +E+ ++ E
Sbjct: 45 EEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMES 104
Query: 649 EEEE 652
+E
Sbjct: 105 NKEN 108
Score = 51.0 bits (122), Expect = 2e-08
Identities = 13/62 (20%), Positives = 26/62 (41%)
Query: 599 EREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGGK 658
E + E+ E E E ++ EE ++ +E+ ++ E +E E R K
Sbjct: 64 ELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEK 123
Query: 659 EE 660
++
Sbjct: 124 DK 125
Score = 51.0 bits (122), Expect = 2e-08
Identities = 11/60 (18%), Positives = 28/60 (46%)
Query: 593 QLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
++I++ E + +E+ ++ E +E E E +E+++ EE + +E +
Sbjct: 78 EVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELK 137
Score = 50.7 bits (121), Expect = 3e-08
Identities = 12/64 (18%), Positives = 26/64 (40%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+IQ + +E+ ++ E +E E E +E+++ EE + +
Sbjct: 75 HEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNK 134
Query: 647 EEEE 650
E +E
Sbjct: 135 ELKE 138
Score = 49.9 bits (119), Expect = 5e-08
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 596 RRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRG 655
RR EE +++ E EE + +E E + + E+ E E E ++ EE + + +
Sbjct: 39 RRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKL 98
Query: 656 GGKEE 660
K E
Sbjct: 99 AQKME 103
Score = 49.5 bits (118), Expect = 8e-08
Identities = 11/56 (19%), Positives = 25/56 (44%)
Query: 599 EREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVR 654
++ E EE + +E E + E+ E +E ++ EE + +E+ ++
Sbjct: 49 KKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMES 104
Score = 47.6 bits (113), Expect = 3e-07
Identities = 11/60 (18%), Positives = 24/60 (40%)
Query: 593 QLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
+++ E EE + +E E + E+ E E ++ EE + +E+ +
Sbjct: 41 DPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQ 100
Score = 47.2 bits (112), Expect = 5e-07
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 596 RRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
RR + EE +++ E EE + +E E + E+ E E E ++ EE +
Sbjct: 38 RRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMA 94
>d2es4d1 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB)
{Burkholderia glumae [TaxId: 337]}
Length = 280
Score = 48.1 bits (114), Expect = 1e-06
Identities = 4/54 (7%), Positives = 19/54 (35%)
Query: 599 EREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
ER + E++ + + +E ++ +++ + + ++
Sbjct: 141 ERIRIANDTTLSPEQKAARLAALDAQLTPDERAQQAALHAQQDAVTKIADLQKA 194
Score = 41.2 bits (96), Expect = 3e-04
Identities = 3/42 (7%), Positives = 12/42 (28%)
Query: 599 EREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEE 640
ER+ + ++ + + ++ E +
Sbjct: 237 ERDRIAAQGLAPQDRDARIAQLRQQTFTAPGEAIRAASLDRG 278
Score = 30.0 bits (67), Expect = 0.97
Identities = 3/39 (7%), Positives = 9/39 (23%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEE 625
RI + + + ++ E +
Sbjct: 240 RIAAQGLAPQDRDARIAQLRQQTFTAPGEAIRAASLDRG 278
>d1mu2a1 c.55.3.1 (A:430-555) HIV RNase H (Domain of reverse
transcriptase) {Human immunodeficiency virus type 2
[TaxId: 11709]}
Length = 126
Score = 44.9 bits (105), Expect = 2e-06
Identities = 27/119 (22%), Positives = 38/119 (31%), Gaps = 8/119 (6%)
Query: 332 YTDGS--KTPTTTGCAYSVGNVVRSTLLNPVNSIFSAELIAIFLCLEAILDSPSGKFLIV 389
YTDGS + Y + AEL A + L K I+
Sbjct: 11 YTDGSCNRQSKEGKAGYVTDRGKDKVKKLEQTTNQQAELEAFAMALT----DSGPKVNII 66
Query: 390 TDSRSSLAALSNVRFINPLITKVYSTWSYLKLCKKDITFMWCPSHCGIKGNEIVDVAAK 448
DS +K+ + + K+ I W P+H GI GN+ VD
Sbjct: 67 VDS--QYVMGIVASQPTESESKIVNQIIEEMIKKEAIYVAWVPAHKGIGGNQEVDHLVS 123
Score = 37.6 bits (86), Expect = 8e-04
Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 473 MNSEWQNLWDNVPNTNKLKTIRPSIKKDITFMWCPSHCGIKGNELVDVAAK 523
+ + ++ K+ I W P+H GI GN+ VD
Sbjct: 75 IVASQPTESES--KIVNQIIEEMIKKEAIYVAWVPAHKGIGGNQEVDHLVS 123
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 42.7 bits (100), Expect = 1e-04
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 598 GEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEE 640
G+ + + E+ + +E E E E + +E+ + + EEE+ +
Sbjct: 72 GQEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 41.5 bits (97), Expect = 2e-04
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEE 642
+E+ + E+ + +E E E E V EEE+ + + EEE+ +
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 40.8 bits (95), Expect = 3e-04
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 613 EEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRG 655
+E+ + E+ + + E E E +EEE+ + + EEE+V+G
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVKG 115
Score = 40.8 bits (95), Expect = 3e-04
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 608 EEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEE 649
+E+ + E+ + +E E + E E +EEE+ + + EEE+ +
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 40.4 bits (94), Expect = 5e-04
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 602 EEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEE 643
+E+ + E+ + +E E E E + +EEE+ + + EEE+ +
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 40.4 bits (94), Expect = 5e-04
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 612 EEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEE 651
+E+ + E+ + +E+ E E E +EEE+ + + EEE+
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQ 112
Score = 40.4 bits (94), Expect = 5e-04
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 603 EEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEE 644
+E+ + E+ + +E E E E+ +EEE+ + + EEE+ +
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 40.0 bits (93), Expect = 5e-04
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 618 EEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGGKEEI 661
+E+ + E++ + +E E E E +EEE+ + + + I
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVKGI 116
Score = 39.6 bits (92), Expect = 8e-04
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 604 EEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEE 645
+E+ + E+ + +E E E +EEE+ + + EEE+ +
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 39.6 bits (92), Expect = 9e-04
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 605 EEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+E+ + E+ + +E E E + +EEE+ + + EEE+ +
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 39.2 bits (91), Expect = 0.001
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEE 636
+ II + + E+ + +E E E E +EEE+ Q + EEE+ +
Sbjct: 65 QRSRIISGQEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 38.8 bits (90), Expect = 0.001
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 607 EEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEE 648
+E+ + E+ + +E E + E +EEE+ + + EEE+ +
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 38.8 bits (90), Expect = 0.001
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 609 EEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEE 650
+E+ + E+ + +E E E E +EEE+ + + EEE+ +
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 38.8 bits (90), Expect = 0.002
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 611 EEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
+E+ + E+ + +E V+ E E +EEE+ + + EEE+ +
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 38.5 bits (89), Expect = 0.002
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 610 EEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEV 653
+E+ + E+ + +E E E +EEE+ + + EEE+ + +
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVKGI 116
Score = 37.7 bits (87), Expect = 0.003
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 606 EEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEE 647
+E+ + E+ + +E E E +EEE+ + + EEE+ +
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 36.1 bits (83), Expect = 0.009
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 617 EEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGGK 658
+E+ + E+ + +E E E E +EEE+ + + K
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 31.1 bits (70), Expect = 0.40
Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEE-----EEEEEEVQEEEEEEEEEEEEEE 641
++ ++ L E+E + E E E + ++ E+ + +E+ + E+ + +
Sbjct: 26 KLLSLKTLQSELFEVEKEFQVEMFELENKFLQKYKPIWEQRSRIISGQEQPKPEQIAKGQ 85
Query: 642 EEEEEEEEEEE 652
E E E E
Sbjct: 86 EIVESLNETEL 96
Score = 30.4 bits (68), Expect = 0.74
Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Query: 599 EREEEEEEEEEEEEEEEEEEEE------EEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
E E E+E + E E E + + E+ + +E+ + E+ + +E E E E
Sbjct: 36 ELFEVEKEFQVEMFELENKFLQKYKPIWEQRSRIISGQEQPKPEQIAKGQEIVESLNETE 95
Query: 653 VRGGGKEEISLH 664
+ +E+
Sbjct: 96 LLVDEEEKAQND 107
>d1siga_ a.177.1.1 (A:) Sigma70 {Escherichia coli [TaxId: 562]}
Length = 334
Score = 42.6 bits (99), Expect = 1e-04
Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Query: 591 IIQLIRRGEREEEEE-----------EEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEE 639
I L+ + R E EE + EE+ E ++ +++E+E+EE+
Sbjct: 29 ITYLLEQYNRVEAEEARLSDLITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEED 88
Query: 640 EEEEEEEEEEE 650
+++ +++
Sbjct: 89 GDDDSADDDNS 99
Score = 40.7 bits (94), Expect = 4e-04
Identities = 11/79 (13%), Positives = 32/79 (40%)
Query: 591 IIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEE 650
+ LI EE+ E +E+ ++ ++E+EE+ +++ +++ + E
Sbjct: 46 LSDLITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELA 105
Query: 651 EEVRGGGKEEISLHFYVLY 669
E + + + +
Sbjct: 106 REKFAELRAQYVVTRDTIK 124
>d1ofcx3 a.187.1.1 (X:697-798) HAND domain of the nucleosome
remodeling ATPase ISWI {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 102
Score = 39.0 bits (91), Expect = 2e-04
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEE 640
+ E + + + EE+ + +E E + EEE +E+E +
Sbjct: 60 KNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 37.9 bits (88), Expect = 4e-04
Identities = 9/41 (21%), Positives = 20/41 (48%)
Query: 603 EEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEE 643
+ E + + + EE+ + +E + EEE +E+E +
Sbjct: 59 PKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 37.5 bits (87), Expect = 6e-04
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEE 641
+ E + + + EE+ + +E E EEE +E+E +
Sbjct: 59 PKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 37.5 bits (87), Expect = 6e-04
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 604 EEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEE 644
+ E + + + EE+ + + E EEE +E+E +
Sbjct: 59 PKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 37.1 bits (86), Expect = 8e-04
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 606 EEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+ E + + + EE+ ++ E E EEE +E+E +
Sbjct: 59 PKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 37.1 bits (86), Expect = 8e-04
Identities = 9/41 (21%), Positives = 20/41 (48%)
Query: 599 EREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEE 639
+ E + + + EE+ + +E E +EE +E+E +
Sbjct: 59 PKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 36.3 bits (84), Expect = 0.001
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 610 EEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEE 650
+ E + + + E Q + +E E EEE +E+E +
Sbjct: 59 PKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 36.3 bits (84), Expect = 0.002
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 602 EEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEE 642
+ E + + + EE+ + +E EEE +E+E +
Sbjct: 59 PKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 35.6 bits (82), Expect = 0.003
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 609 EEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEE 649
+ E + + + EE ++ +E E EEE +E+E +
Sbjct: 59 PKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 35.6 bits (82), Expect = 0.003
Identities = 9/41 (21%), Positives = 20/41 (48%)
Query: 612 EEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
+ E + + + +E+ + +E E EEE +E+E +
Sbjct: 59 PKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 34.8 bits (80), Expect = 0.005
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 605 EEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEE 645
+ E + + + EE+ + + E EEE +E+E +
Sbjct: 59 PKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 33.3 bits (76), Expect = 0.019
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 582 EIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEE 635
EI R ++ + E + + + EE+ + +E E EEE+QE+E +
Sbjct: 46 EIYYFRKTVGYKVPKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 31.3 bits (71), Expect = 0.094
Identities = 8/40 (20%), Positives = 18/40 (45%)
Query: 597 RGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEE 636
+ + + + EE+ + +E E EE +E+E +
Sbjct: 60 KNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 25.6 bits (56), Expect = 9.3
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 630 EEEEEEEEEEEEEEEEEEEEEEEVRGGGKEEI 661
+ E + + + EE+ + +E +EEI
Sbjct: 59 PKNTELGSDATKVQREEQRKIDEAEPLTEEEI 90
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943)
{Staphylococcus aureus [TaxId: 1280]}
Length = 185
Score = 40.4 bits (93), Expect = 2e-04
Identities = 7/57 (12%), Positives = 31/57 (54%)
Query: 605 EEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGGKEEI 661
+++E + ++ ++ +++EE ++ ++ E +E++++ E+ ++ G +
Sbjct: 3 DKKEIKAYLKQVDKIKDDEEPIKTVGKKIAELDEKKKKLTEDVNSKDTAVRGKAVKD 59
Score = 39.7 bits (91), Expect = 4e-04
Identities = 7/50 (14%), Positives = 29/50 (58%)
Query: 602 EEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEE 651
+++E + ++ ++ +++EE + V ++ E +E++++ E+ ++
Sbjct: 3 DKKEIKAYLKQVDKIKDDEEPIKTVGKKIAELDEKKKKLTEDVNSKDTAV 52
Score = 38.9 bits (89), Expect = 8e-04
Identities = 6/60 (10%), Positives = 29/60 (48%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGGKEE 660
+++E + ++ ++ +++EE + ++ E +E++++ E+ ++ +
Sbjct: 3 DKKEIKAYLKQVDKIKDDEEPIKTVGKKIAELDEKKKKLTEDVNSKDTAVRGKAVKDLIK 62
Score = 38.1 bits (87), Expect = 0.001
Identities = 6/61 (9%), Positives = 28/61 (45%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGGKEE 660
++E + ++ ++ +++EE + + E +E++++ E+ ++ + +
Sbjct: 4 KKEIKAYLKQVDKIKDDEEPIKTVGKKIAELDEKKKKLTEDVNSKDTAVRGKAVKDLIKN 63
Query: 661 I 661
Sbjct: 64 A 64
Score = 33.1 bits (74), Expect = 0.065
Identities = 6/53 (11%), Positives = 25/53 (47%)
Query: 613 EEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGGKEEISLHF 665
+++E + ++ + +++EE + ++ E +E++++ K+
Sbjct: 3 DKKEIKAYLKQVDKIKDDEEPIKTVGKKIAELDEKKKKLTEDVNSKDTAVRGK 55
>d1ulya_ a.4.5.58 (A:) Hypothetical protein PH1932 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 190
Score = 39.6 bits (92), Expect = 5e-04
Identities = 13/65 (20%), Positives = 27/65 (41%)
Query: 594 LIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEV 653
L+ +R ++E + + EE+E+ ++ E+ E E +EE E +
Sbjct: 123 LLNIMDRMSQKEFDATVRISKYIEEKEDALKDFSNEDIIHAIEWLSTAELARDEEYLELL 182
Query: 654 RGGGK 658
+ G
Sbjct: 183 KRLGS 187
>d1qkla_ a.143.1.2 (A:) RPB6 {Human (Homo sapiens) [TaxId: 9606]}
Length = 127
Score = 37.1 bits (86), Expect = 0.001
Identities = 10/48 (20%), Positives = 25/48 (52%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEE 648
+ E+ + ++ ++ EE+E ++ E +EE +E E E + ++
Sbjct: 3 DNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQK 50
Score = 36.7 bits (85), Expect = 0.002
Identities = 11/48 (22%), Positives = 25/48 (52%)
Query: 602 EEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEE 649
+ E+ + ++ ++ EE+E ++ E EEE +E E E + ++
Sbjct: 3 DNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQK 50
Score = 36.3 bits (84), Expect = 0.002
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 603 EEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEE 650
+ E+ + ++ ++ EE+E ++ EEE +E E E + ++
Sbjct: 3 DNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQK 50
Score = 36.3 bits (84), Expect = 0.002
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 606 EEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVR 654
+ E+ + ++ ++ EE+E E EEE +E E E + + R
Sbjct: 3 DNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKR 51
Score = 36.3 bits (84), Expect = 0.002
Identities = 10/48 (20%), Positives = 26/48 (54%)
Query: 604 EEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEE 651
+ E+ + ++ ++ EE+E ++++ EEE +E E E + ++
Sbjct: 3 DNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQK 50
Score = 36.3 bits (84), Expect = 0.002
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 605 EEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
+ E+ + ++ ++ EE+E + E EEE +E E E + ++
Sbjct: 3 DNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQK 50
Score = 35.6 bits (82), Expect = 0.005
Identities = 11/49 (22%), Positives = 22/49 (44%)
Query: 616 EEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGGKEEISLH 664
+ E+ + ++ + EE+E ++ E EEE +E E G +
Sbjct: 3 DNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKR 51
Score = 34.0 bits (78), Expect = 0.016
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 599 EREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEE 644
E + ++ ++ EE+E ++ E EEE QE E E + ++
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQK 50
Score = 33.3 bits (76), Expect = 0.026
Identities = 13/71 (18%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 612 EEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGGKEEISLHFYVLYVL 671
+ E+ + ++ ++ ++E ++ E EEE +E E E ++ I+ + Y
Sbjct: 3 DNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKY-- 60
Query: 672 SKGKIAGLFYL 682
+ ++ G L
Sbjct: 61 ERARVLGTRAL 71
Score = 32.9 bits (75), Expect = 0.040
Identities = 9/48 (18%), Positives = 24/48 (50%)
Query: 599 EREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+ E+ + ++ ++ EE+E ++ E E + +E E E + ++
Sbjct: 3 DNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQK 50
Score = 30.6 bits (69), Expect = 0.22
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 598 GEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEE 638
G+ ++ EE+E ++ E EEE +E E+ E + ++
Sbjct: 10 GDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQK 50
>d1s1ta1 c.55.3.1 (A:430-539) HIV RNase H (Domain of reverse
transcriptase) {Human immunodeficiency virus type 1
[TaxId: 11676]}
Length = 110
Score = 36.5 bits (84), Expect = 0.002
Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 12/107 (11%)
Query: 332 YTDGS--KTPTTTGCAYSVGNVVRSTLLNPVNSIFSAELIAIFLCLEAILDSPSGKFLIV 389
Y DG+ + Y + + + EL AI+L L+ + IV
Sbjct: 12 YVDGAANRETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAIYLALQDS----GLEVNIV 67
Query: 390 TDSRSSLAALSNVRFINPLITKVYSTWSYLKLC--KKDITFMWCPSH 434
TDS+ +L + P ++ ++ K+ + W P+H
Sbjct: 68 TDSQYALGIIQA----QPDQSESELVNQIIEQLIKKEKVYLAWVPAH 110
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 36.8 bits (85), Expect = 0.002
Identities = 8/46 (17%), Positives = 18/46 (39%)
Query: 600 REEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEE 645
+ + + E EEE Q+E + +++ E ++E
Sbjct: 87 KTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQE 132
Score = 36.4 bits (84), Expect = 0.003
Identities = 9/60 (15%), Positives = 26/60 (43%)
Query: 589 ENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEE 648
+ I ++ +E + + + E EEE+ +++E + +++ E ++E
Sbjct: 73 GSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQE 132
Score = 34.1 bits (78), Expect = 0.016
Identities = 8/56 (14%), Positives = 25/56 (44%)
Query: 586 PRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEE 641
++ ++Q + + + E EEE +++E+ + +++ E ++E
Sbjct: 77 SEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQE 132
Score = 33.7 bits (77), Expect = 0.023
Identities = 7/49 (14%), Positives = 20/49 (40%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEE 649
+E + + + E EE +++E + +++ E ++E
Sbjct: 84 QECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQE 132
Score = 33.3 bits (76), Expect = 0.033
Identities = 8/53 (15%), Positives = 23/53 (43%)
Query: 600 REEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
+E +E + + + E +EE +++E + +++ E ++E
Sbjct: 80 KEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQE 132
>d1jl1a_ c.55.3.1 (A:) RNase H (RNase HI) {Escherichia coli [TaxId:
562]}
Length = 152
Score = 36.5 bits (83), Expect = 0.003
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Query: 416 WSYLKLCKKDITFMWCPSHCGIKGNEIVD----VAAKNPTTGTTPFK 458
L + I + W H G NE D AA NPT T ++
Sbjct: 104 RLDAALGQHQIKWEWVKGHAGHPENERADELARAAAMNPTLEDTGYQ 150
Score = 34.2 bits (77), Expect = 0.018
Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 5/66 (7%)
Query: 473 MNSEWQNLWDNVPNTNKLKTIRP-SIKKDITFMWCPSHCGIKGNELVD----VAAKNPTT 527
V N + + + + I + W H G NE D AA NPT
Sbjct: 85 KRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERADELARAAAMNPTL 144
Query: 528 GTTPFK 533
T ++
Sbjct: 145 EDTGYQ 150
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 37.0 bits (85), Expect = 0.007
Identities = 15/67 (22%), Positives = 24/67 (35%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
R I++ +R + +E E E E + + E E + E E E E+
Sbjct: 307 REREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGA 366
Query: 647 EEEEEEV 653
EV
Sbjct: 367 RFVRLEV 373
Score = 32.3 bits (73), Expect = 0.19
Identities = 13/67 (19%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Query: 588 IENIIQLIRRGER-EEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+ + + R + E E E + + E E E E E E+
Sbjct: 312 LRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRL 371
Query: 647 EEEEEEV 653
E EE++
Sbjct: 372 EVTEEDI 378
Score = 30.8 bits (69), Expect = 0.53
Identities = 13/60 (21%), Positives = 23/60 (38%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
R++ + + I ER+ + E E + E E E ++ E EE+ E
Sbjct: 321 RLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAE 380
Score = 30.4 bits (68), Expect = 0.72
Identities = 14/78 (17%), Positives = 26/78 (33%)
Query: 573 KVWKTSDQDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEE 632
W+ + ++ + +RR E + + E E + E EV+ E+
Sbjct: 303 AEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEK 362
Query: 633 EEEEEEEEEEEEEEEEEE 650
E EE+ E
Sbjct: 363 LRGARFVRLEVTEEDIAE 380
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP
module {Pseudomonas putida [TaxId: 303]}
Length = 407
Score = 36.8 bits (84), Expect = 0.009
Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 6/67 (8%)
Query: 593 QLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEE------EEEEEEE 646
LI+ G EEE + E E ++E E+ +E +
Sbjct: 341 HLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAASMFEDVYKEMPDHL 400
Query: 647 EEEEEEV 653
+ +E+
Sbjct: 401 RRQRQEL 407
Score = 28.3 bits (62), Expect = 3.4
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 591 IIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEE 643
I +L + + EEE + E E ++ E+
Sbjct: 335 IARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAAS 387
Score = 27.5 bits (60), Expect = 6.3
Identities = 13/90 (14%), Positives = 25/90 (27%), Gaps = 5/90 (5%)
Query: 560 PNTNKLKTIRPSIKVWKTSDQDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEE 619
T + S K D+ + + I +++ + EEE +
Sbjct: 303 WVTYRAGPHSTSDDPSKYRPADDWSHFPLGDPIARLKQHLIKIGHWSEEEHQ-----ATT 357
Query: 620 EEEEEEVQEEEEEEEEEEEEEEEEEEEEEE 649
E E V ++E E+
Sbjct: 358 AEFEAAVIAAQKEAEQYGTLANGHIPSAAS 387
>d1rila_ c.55.3.1 (A:) RNase H (RNase HI) {Thermus thermophilus
[TaxId: 274]}
Length = 147
Score = 34.9 bits (79), Expect = 0.010
Identities = 25/135 (18%), Positives = 41/135 (30%), Gaps = 19/135 (14%)
Query: 332 YTDGS--KTPTTTGCAYSV---GNVVRSTLLNPVNSIFSAELIAIFLCLEAILDSPSGKF 386
+TDG+ P G A + + + + EL A L+A +
Sbjct: 7 FTDGACLGNPGPGGWAALLRFHAHEKLLSGGEACTTNNRMELKAAIEGLKA--LKEPCEV 64
Query: 387 LIVTDSRSSLAALSNV------------RFINPLITKVYSTWSYLKLCKKDITFMWCPSH 434
+ TDS A + P+ + L + + F + H
Sbjct: 65 DLYTDSHYLKKAFTEGWLEGWRKRGWRTAEGKPVKNRDLWEALLLAMAPHRVRFHFVKGH 124
Query: 435 CGIKGNEIVDVAAKN 449
G NE VD A+
Sbjct: 125 TGHPENERVDREARR 139
Score = 34.5 bits (78), Expect = 0.013
Identities = 13/79 (16%), Positives = 22/79 (27%), Gaps = 10/79 (12%)
Query: 456 PFKLCTPEDFKPFVTALMNSEWQNLWDNVPNTNKLKTIR----------PSIKKDITFMW 505
P ++ D A + T + K ++ + F +
Sbjct: 61 PCEVDLYTDSHYLKKAFTEGWLEGWRKRGWRTAEGKPVKNRDLWEALLLAMAPHRVRFHF 120
Query: 506 CPSHCGIKGNELVDVAAKN 524
H G NE VD A+
Sbjct: 121 VKGHTGHPENERVDREARR 139
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment
(residues 410-1202) {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 760
Score = 36.0 bits (82), Expect = 0.018
Identities = 10/53 (18%), Positives = 27/53 (50%)
Query: 603 EEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRG 655
+E ++ ++++E+E E E ++ ++ + + E +E + + E RG
Sbjct: 708 KERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEARG 760
Score = 34.0 bits (77), Expect = 0.074
Identities = 9/52 (17%), Positives = 25/52 (48%)
Query: 597 RGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEE 648
ER ++ ++++E+E E E + +++ + + E +E + + E
Sbjct: 707 TKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEA 758
Score = 32.5 bits (73), Expect = 0.21
Identities = 9/56 (16%), Positives = 23/56 (41%)
Query: 595 IRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEE 650
I +E ++ ++++E+E E E + + + E +E + + E
Sbjct: 703 IWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEA 758
Score = 31.3 bits (70), Expect = 0.49
Identities = 14/64 (21%), Positives = 23/64 (35%)
Query: 588 IENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEE 647
IIQ + +E + +E E+ + +EE+EE E+ E
Sbjct: 627 RNAIIQELENLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVIN 686
Query: 648 EEEE 651
EE
Sbjct: 687 GPEE 690
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid
dehydrogenase, PP module {Thermus thermophilus [TaxId:
274]}
Length = 362
Score = 35.3 bits (80), Expect = 0.019
Identities = 18/62 (29%), Positives = 25/62 (40%)
Query: 593 QLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
L RG EE EE+ EE E E +E EE E E+ E+ +E
Sbjct: 298 FLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVPPEWMFEDVFAEKPWHLLRQEAL 357
Query: 653 VR 654
++
Sbjct: 358 LK 359
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 268
Score = 35.0 bits (80), Expect = 0.022
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 604 EEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEV 653
+ E+ +EE EE+ E+ + + EE+ E EE + ++E + E
Sbjct: 213 DPEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQETPDPPEA 262
Score = 34.2 bits (78), Expect = 0.038
Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 5/127 (3%)
Query: 523 KNPTTGTTPFKLCTPEDFKPFVTALMNSEWQSLWDNVPNTNKLKTIRPSIKVWKTSDQDE 582
+ TG+ P L + + + LKT R + + K
Sbjct: 138 RENNTGSFPRGLSLMLQSISK--WIYDMDPFEPLKYTEPLKALKT-RIAEEGSKAVFSPL 194
Query: 583 IGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEE--EEEVQEEEEEEEEEEEEE 640
I + N ++ + + E+ +EE EE+ E+ + EE++ E EE + ++
Sbjct: 195 IEKLILNNSHRVTIEMQPDPEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQ 254
Query: 641 EEEEEEE 647
E + E
Sbjct: 255 ETPDPPE 261
Score = 31.1 bits (70), Expect = 0.32
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 603 EEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEE 651
+ E+ +EE EE+ E+ + +E+ E EE + ++E + E
Sbjct: 213 DPEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQETPDPPE 261
>d1rq0a_ e.38.1.1 (A:) Peptide chain release factor 1, RF1
{Thermotoga maritima [TaxId: 2336]}
Length = 333
Score = 35.1 bits (80), Expect = 0.027
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+IE I + +E +E E EE E E E E+ ++E ++ +E E
Sbjct: 31 KIEEIENITN-----RIKETQEFIELLREEGENELEIEKYEKELDQLYQELLFLLSPEAS 85
Query: 647 EEEEEEVRGGGKEEISLHF 665
++ E+R G E + F
Sbjct: 86 DKAIVEIRPGTGGEEAALF 104
Score = 33.6 bits (76), Expect = 0.063
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 602 EEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEE 649
E + EE E +E +E E ++EE E E E E+ E+E ++ +E
Sbjct: 28 EYAKIEEIENITNRIKETQEFIELLREEGENELEIEKYEKELDQLYQE 75
Score = 33.2 bits (75), Expect = 0.090
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 603 EEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEE 650
E + EE E +E +E E+ EE E E E E+ E+E ++ +E
Sbjct: 28 EYAKIEEIENITNRIKETQEFIELLREEGENELEIEKYEKELDQLYQE 75
Score = 32.8 bits (74), Expect = 0.13
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 605 EEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGGKEEISLH 664
E + EE E +E +E ++ EE E E E E+ E+E ++ +E+ E S
Sbjct: 28 EYAKIEEIENITNRIKETQEFIELLREEGENELEIEKYEKELDQLYQELLFLLSPEASDK 87
Query: 665 FYV 667
V
Sbjct: 88 AIV 90
Score = 29.3 bits (65), Expect = 1.6
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+ + I +L+ R + E+ + E + EE E + +E E EE E E E E
Sbjct: 4 KKKEIEKLLARPDLTPEQMKNYGMEYAKIEEIENITNRIKETQEFIELLREEGENELEIE 63
Query: 647 EEEEE 651
+ E+E
Sbjct: 64 KYEKE 68
>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 365
Score = 33.7 bits (76), Expect = 0.063
Identities = 32/255 (12%), Positives = 68/255 (26%), Gaps = 35/255 (13%)
Query: 422 CKKDITFMWCPSHCGIKGNEIVDVAAKNPTTGTTPFKLCTPEDFKPFVTALMNSEWQ-NL 480
+ P + +I + A+ L +T +
Sbjct: 119 SRGHFHGNQIPEGVNVLPPQI-IIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGD 177
Query: 481 WDNVPNTNKLKTIRP--SIKKDITFMWCPSHCGIKGNELVDVAAKNPTTGTTPFKLCTPE 538
+ N ++ + + P L A G +
Sbjct: 178 FYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLA 237
Query: 539 DFKPFVTA----------------LMNSEWQSLWDNVPNTNKLKTIRPSIKVWKTSDQDE 582
+ A ++ + P R + + +D
Sbjct: 238 VYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRY-----RSKELENEWAKKDP 292
Query: 583 IGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEE------EEE 636
+ R L +G EEEE E+ +EE +E ++ +E +++ + EE
Sbjct: 293 L--VRFRK--FLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEEL 348
Query: 637 EEEEEEEEEEEEEEE 651
+E+ E +E+E
Sbjct: 349 PFNLKEQYEIYKEKE 363
>d1gsma2 b.1.1.4 (A:91-206) Mucosal addressin cell adhesion
molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId:
9606]}
Length = 116
Score = 31.5 bits (71), Expect = 0.11
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 597 RGEREEEEEEEEEEEEEEEEEEEEEEEEEV 626
G +E E + E +EEEEE + +E+ +
Sbjct: 41 VGGQELEGAQALGPEVQEEEEEPQGDEDVL 70
Score = 29.1 bits (65), Expect = 0.59
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 620 EEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+E E Q E +EEEEE + +E+
Sbjct: 43 GQELEGAQALGPEVQEEEEEPQGDEDV 69
Score = 28.0 bits (62), Expect = 1.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 613 EEEEEEEEEEEEEVQEEEEEEEEEEEE 639
+E E + EVQEEEEE + +E+
Sbjct: 43 GQELEGAQALGPEVQEEEEEPQGDEDV 69
Score = 28.0 bits (62), Expect = 1.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 627 QEEEEEEEEEEEEEEEEEEEEEEEEEV 653
QE E + E +EEEEE + +E+ +
Sbjct: 44 QELEGAQALGPEVQEEEEEPQGDEDVL 70
Score = 28.0 bits (62), Expect = 1.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 618 EEEEEEEEVQEEEEEEEEEEEEEEEEE 644
+E E + E +EEEEE + +E+
Sbjct: 43 GQELEGAQALGPEVQEEEEEPQGDEDV 69
Score = 27.6 bits (61), Expect = 2.1
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 594 LIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQ 627
L+ G+ E + E +EEEEE + +E+ +
Sbjct: 39 LLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFR 72
Score = 27.2 bits (60), Expect = 3.1
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 617 EEEEEEEEEVQEEEEEEEEEEEEEEEE 643
+E E + + E +EEEEE + +E+
Sbjct: 43 GQELEGAQALGPEVQEEEEEPQGDEDV 69
Score = 26.8 bits (59), Expect = 3.5
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 623 EEEVQEEEEEEEEEEEEEEEEEEEEEE 649
+E++ + E +EEEEE + +E+
Sbjct: 43 GQELEGAQALGPEVQEEEEEPQGDEDV 69
Score = 26.4 bits (58), Expect = 5.2
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 606 EEEEEEEEEEEEEEEEEEEEVQEEEEE 632
+E E + E +EEEEE Q +E+
Sbjct: 43 GQELEGAQALGPEVQEEEEEPQGDEDV 69
Score = 26.4 bits (58), Expect = 6.1
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 628 EEEEEEEEEEEEEEEEEEEEEEEEE 652
+E E + E +EEEEE + +E
Sbjct: 43 GQELEGAQALGPEVQEEEEEPQGDE 67
Score = 25.7 bits (56), Expect = 9.8
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 609 EEEEEEEEEEEEEEEEEVQEEEEEEEE 635
+E E + E +EE +E + +E+
Sbjct: 43 GQELEGAQALGPEVQEEEEEPQGDEDV 69
>d1u8xx2 d.162.1.2 (X:170-445) Maltose-6'-phosphate glucosidase GlvA
{Bacillus subtilis [TaxId: 1423]}
Length = 276
Score = 32.6 bits (74), Expect = 0.11
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 610 EEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGGKEEIS 662
++ ++ EV E E + + E+ E E I
Sbjct: 104 DDMVKKSNPNHTRANEVMEGREAFIFSQCDMITREQSSENSEIKIDDHASYIV 156
>d1p32a_ d.25.1.1 (A:) Acidic mitochondrial matrix protein p32
{Human (Homo sapiens) [TaxId: 9606]}
Length = 209
Score = 31.8 bits (72), Expect = 0.17
Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 21/83 (25%)
Query: 593 QLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEE---------------------VQEEEE 631
+ E +EE + ++ + + E E +
Sbjct: 8 AFVDFLSDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLVRKVAGEKITVTFNINNSIP 67
Query: 632 EEEEEEEEEEEEEEEEEEEEEVR 654
+ EEE + ++ EE+E E+
Sbjct: 68 PTFDGEEEPSQGQKVEEQEPELT 90
Score = 30.7 bits (69), Expect = 0.39
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 18/76 (23%)
Query: 564 KLKTIRPSIKVWKTSDQDEIGSPRIENIIQLIRRGEREE----------EEEEEEEEEEE 613
K KT+ W+ +L+R+ E+ + EEE
Sbjct: 25 KHKTLPKMSGGWELELNG--------TEAKLVRKVAGEKITVTFNINNSIPPTFDGEEEP 76
Query: 614 EEEEEEEEEEEEVQEE 629
+ ++ EE+E E+
Sbjct: 77 SQGQKVEEQEPELTST 92
Score = 29.9 bits (67), Expect = 0.71
Identities = 11/98 (11%), Positives = 29/98 (29%), Gaps = 18/98 (18%)
Query: 602 EEEEEEEEEEEEEEEEEEEEEEEEVQEEEEE------------------EEEEEEEEEEE 643
+E +EE + ++ + + E++ E + E
Sbjct: 14 SDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLVRKVAGEKITVTFNINNSIPPTFDGE 73
Query: 644 EEEEEEEEEVRGGGKEEISLHFYVLYVLSKGKIAGLFY 681
EE + ++ + + +F V + + L
Sbjct: 74 EEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVL 111
Score = 27.6 bits (61), Expect = 4.2
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQEE 629
+ EEE + ++ EE+E E
Sbjct: 68 PTFDGEEEPSQGQKVEEQEPELTSTPNFV 96
>d1us7b_ a.205.1.1 (B:) Hsp90 co-chaperone CDC37 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 201
Score = 31.7 bits (72), Expect = 0.20
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
Query: 576 KTSDQDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEE 635
K+ D I+ +R+ E +E E +E + E+ +E E
Sbjct: 77 KSLKVDPRAC--FRQFFTKIKTADRQYMEGFNDELEAFKERVRGRAKLR--IEKAMKEYE 132
Query: 636 EEEEEEEEEEEEEEEEEV 653
EEE ++ + EV
Sbjct: 133 EEERKKRLGPGGLDPVEV 150
Score = 28.6 bits (64), Expect = 2.0
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 6/60 (10%)
Query: 612 EEEEEEEEEEEEEEVQE------EEEEEEEEEEEEEEEEEEEEEEEEVRGGGKEEISLHF 665
+ + + E +E++ + E+ +E EEEE ++ G E+
Sbjct: 95 KTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDPVEVYESL 154
Score = 28.6 bits (64), Expect = 2.1
Identities = 10/56 (17%), Positives = 21/56 (37%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGG 656
+ + + E +E E +E + E+ +E EEEE ++ +
Sbjct: 95 KTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDPVEV 150
Score = 27.8 bits (62), Expect = 3.6
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 599 EREEEEEEEEEEEEEEEEEEEEEEEEEVQEE 629
E+ +E EEEE ++ + EV E
Sbjct: 123 RIEKAMKEYEEEERKKRLGPGGLDPVEVYES 153
Score = 27.0 bits (60), Expect = 6.6
Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 609 EEEEEEEEEEEEEEEEEVQEE-EEEEEEEEEEEEEEEEEEEEEEEVRGGGKEE 660
+ + + E +E E +E + E+ +E EEEE ++ + GG +
Sbjct: 95 KTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDP 147
>d1e3ha1 a.4.9.1 (A:263-345) Polynucleotide phosphorylase/guanosine
pentaphosphate synthase (PNPase/GPSI), domain 3
{Streptomyces antibioticus [TaxId: 1890]}
Length = 83
Score = 29.4 bits (66), Expect = 0.26
Identities = 9/57 (15%), Positives = 20/57 (35%)
Query: 581 DEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEE 637
P + + + + +RE E + + E+ E E E+E+ +
Sbjct: 10 SAAVRPELSAALTIAGKQDREAELDRVKALAAEKLLPEFEGREKEISAAYRALTKSL 66
Score = 29.0 bits (65), Expect = 0.36
Identities = 11/66 (16%), Positives = 25/66 (37%)
Query: 589 ENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEE 648
+++++ + R E +++ E E + + E+ E E E+E
Sbjct: 3 DDVLEALSAAVRPELSAALTIAGKQDREAELDRVKALAAEKLLPEFEGREKEISAAYRAL 62
Query: 649 EEEEVR 654
+ VR
Sbjct: 63 TKSLVR 68
>d1rype_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 242
Score = 31.6 bits (71), Expect = 0.27
Identities = 24/219 (10%), Positives = 67/219 (30%), Gaps = 19/219 (8%)
Query: 435 CGIKGNEIVDVAAKNPTTG-----TTPFKLCTPEDFKPFVTALMNSEWQNLWDNVP---N 486
GI E V + + T + K+ + + + ++ +++ ++
Sbjct: 30 IGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAV 89
Query: 487 TNKLKTIRPSIKKDITFMWCPSHCGIKGNELVDVAAKNPTTGTTPFKLCTPEDFKPFVTA 546
T+ L + +T C + + G D +
Sbjct: 90 THNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFH 149
Query: 547 LMNSEWQSLWDNVPNTNKLKTIRPSIKVWKTSDQDEIGSPRIENIIQLIRRGEREEEEEE 606
S ++ + + + + S + L+ + ++ EE+
Sbjct: 150 AEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTL------KEAELLVLKILKQVMEEK 203
Query: 607 EEEEEEE-----EEEEEEEEEEEEVQEEEEEEEEEEEEE 640
+E + +++ + + E+ E +E +E+E E
Sbjct: 204 LDENNAQLSCITKQDGFKIYDNEKTAELIKELKEKEAAE 242
>d2e50a1 d.305.1.1 (A:1-222) Protein SET {Human (Homo sapiens)
[TaxId: 9606]}
Length = 222
Score = 31.1 bits (70), Expect = 0.29
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 597 RGEREEEEEEEEEEEEEEEEEEEE--EEEEEVQEEEEEEEEEEEEEEEEEEEE 647
+ ++E + +E E+E++E E +EVQ E + E+ EE + E++
Sbjct: 7 KVSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQK 59
Score = 28.4 bits (63), Expect = 2.5
Identities = 11/50 (22%), Positives = 26/50 (52%)
Query: 603 EEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
++E + +E E+E++E ++ +E + E + E+ EE + E+
Sbjct: 9 SKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQ 58
Score = 28.0 bits (62), Expect = 3.3
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 604 EEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVR 654
++E + +E E+E++E E +E + E + E+ EE + E +
Sbjct: 9 SKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQK 59
Score = 26.8 bits (59), Expect = 6.7
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEE 650
++E + +E E+E++E E + E + E + E+ EE + E++
Sbjct: 10 KKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQK 59
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component
SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 129
Score = 30.1 bits (68), Expect = 0.30
Identities = 7/37 (18%), Positives = 20/37 (54%)
Query: 614 EEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEE 650
+ EE+ ++ +++ E E+E+ E +++E+
Sbjct: 81 GVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKL 117
Score = 28.6 bits (64), Expect = 1.1
Identities = 8/40 (20%), Positives = 21/40 (52%)
Query: 611 EEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEE 650
+ EE+ + + +Q++ E E+E+ E +++E+
Sbjct: 81 GVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRH 120
Score = 28.2 bits (63), Expect = 1.4
Identities = 7/43 (16%), Positives = 22/43 (51%)
Query: 607 EEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEE 649
+ EE+ + + ++++ E E+E+ E +++E+ +
Sbjct: 81 GVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDS 123
Score = 27.8 bits (62), Expect = 2.1
Identities = 7/43 (16%), Positives = 22/43 (51%)
Query: 604 EEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+ EE+ + + +++ EV++E+ E +++E+ +
Sbjct: 81 GVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDS 123
Score = 27.8 bits (62), Expect = 2.2
Identities = 10/52 (19%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 588 IENII-QLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEE 638
I +I L EE+ + + +++ E E+E+ E ++++E+ +
Sbjct: 72 INKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDS 123
Score = 27.4 bits (61), Expect = 2.5
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 623 EEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVR 654
+V EE+ + + +++ E E+E+ E ++
Sbjct: 81 GVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIK 112
Score = 27.4 bits (61), Expect = 3.1
Identities = 7/37 (18%), Positives = 23/37 (62%)
Query: 617 EEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEV 653
+ EE++++ + +++ E E+E+ E +++E++
Sbjct: 81 GVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKL 117
Score = 26.7 bits (59), Expect = 4.8
Identities = 7/37 (18%), Positives = 19/37 (51%)
Query: 615 EEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEE 651
+ EE+ + +++ E E+E+ E +++E+
Sbjct: 81 GVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKL 117
Score = 26.7 bits (59), Expect = 5.3
Identities = 7/42 (16%), Positives = 20/42 (47%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEE 642
+ EE+ + + +++ E E+E E +++E+ +
Sbjct: 82 VDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDS 123
Score = 25.9 bits (57), Expect = 9.6
Identities = 8/39 (20%), Positives = 22/39 (56%)
Query: 616 EEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVR 654
+ EE+ + + +++ E E+E+ E +++E+ +R
Sbjct: 81 GVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMR 119
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid
dehydrogenase, PP module {Human (Homo sapiens) [TaxId:
9606]}
Length = 395
Score = 31.8 bits (71), Expect = 0.31
Identities = 10/71 (14%), Positives = 24/71 (33%), Gaps = 13/71 (18%)
Query: 593 QLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEE-------------EEEEEE 639
L+ +G +EE+E+ ++ + E E+ E + +++E
Sbjct: 317 YLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQES 376
Query: 640 EEEEEEEEEEE 650
+ E
Sbjct: 377 LARHLQTYGEH 387
>d1lr1a_ a.155.1.1 (A:) H1 protein (H-NS) {Escherichia coli [TaxId:
562]}
Length = 57
Score = 27.8 bits (62), Expect = 0.52
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 614 EEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
E EE E+ E V E EEE E EE
Sbjct: 23 ETLEEMLEKLEVVVNERREEESAAAAEVEERTR 55
Score = 26.7 bits (59), Expect = 1.3
Identities = 17/48 (35%), Positives = 20/48 (41%)
Query: 590 NIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEE 637
N I+ +R RE E EE E+ E E EEE E EE
Sbjct: 8 NNIRTLRAQARESTLETLEEMLEKLEVVVNERREEESAAAAEVEERTR 55
Score = 26.7 bits (59), Expect = 1.3
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 613 EEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEE 645
E EE E+ E V E EEE E EE
Sbjct: 23 ETLEEMLEKLEVVVNERREEESAAAAEVEERTR 55
Score = 26.7 bits (59), Expect = 1.5
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 615 EEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEE 647
E EE E+ EV E EEE E EE
Sbjct: 23 ETLEEMLEKLEVVVNERREEESAAAAEVEERTR 55
Score = 26.3 bits (58), Expect = 2.0
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 617 EEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEE 649
E EE E+++ E EEE E EE
Sbjct: 23 ETLEEMLEKLEVVVNERREEESAAAAEVEERTR 55
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato
(Solanum tuberosum) [TaxId: 4113]}
Length = 364
Score = 30.7 bits (68), Expect = 0.53
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 614 EEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEE 648
+E ++ V +E+ + ++EE EE ++E
Sbjct: 330 VSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDE 364
Score = 30.7 bits (68), Expect = 0.63
Identities = 7/35 (20%), Positives = 18/35 (51%)
Query: 618 EEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
+E +++ +E+ + ++EE EE ++E
Sbjct: 330 VSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDE 364
Score = 30.3 bits (67), Expect = 0.82
Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 18/214 (8%)
Query: 428 FMWCPSHCGIKGNEIVDVAAKNPTTGTTPFKLCTPEDFKPFVTALMNSEWQNLWDNVPNT 487
+ I+ ++ T T L + + + + E NL
Sbjct: 165 VTVVSISTYEELKTIIQRGSEQRHTTGT---LMNEQSSRSHLIVSVIIESTNLQTQAIAR 221
Query: 488 NKLKTIRPSIKKDITFMWCPSHCGIKGNELVDVAAKNPTTGTTPFKLCTPEDFKPFVTAL 547
KL + D+ G GN+L + + N + + +
Sbjct: 222 GKLSFV------DLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYR 275
Query: 548 MNSEWQSLWDNVPNTNKLK---TIRPSIKVWKTSDQDE-IGSPRIENIIQLIRRGEREEE 603
+ + D++ K I P+ S+ DE S + ++ I +
Sbjct: 276 NHKLTMLMSDSLGGNAKTLMFVNISPA-----ESNLDETHNSLTYASRVRSIVNDPSKNV 330
Query: 604 EEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEE 637
+E ++ +E+ + +EE EE ++E
Sbjct: 331 SSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDE 364
Score = 29.2 bits (64), Expect = 1.6
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 611 EEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEE 645
+E ++ +E+ + ++EE EE ++E
Sbjct: 330 VSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDE 364
Score = 28.8 bits (63), Expect = 2.4
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 607 EEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEE 641
+E ++ +E+ + ++EE EE ++E
Sbjct: 330 VSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDE 364
Score = 27.6 bits (60), Expect = 5.8
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 612 EEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
+E ++ +E+ + ++EE EE ++E
Sbjct: 330 VSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDE 364
>d2a9ua1 a.118.23.1 (A:6-139) Ubiquitin carboxyl-terminal hydrolase
8, USH8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 134
Score = 29.5 bits (66), Expect = 0.60
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Query: 563 NKLKTIRPSIKVWKTSDQDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEE 622
N +K RP K + +G I+ + E E E + EE E ++ E
Sbjct: 66 NLIKK-RPDFKQQQDYFHSILGPGNIKKAV------EEAERLSESLKLRYEEAEVRKKLE 118
Query: 623 EEEVQEEEEEEEEEEE 638
E++ QEE + +++ +
Sbjct: 119 EKDRQEEAQRLQQKRQ 134
>d1iruc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 250
Score = 30.0 bits (67), Expect = 0.69
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 565 LKTIRPSIKVWK-TSDQDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEE 621
+K + ++ V K ++++ EI + EN +IR +++E E+ ++ EEEE + E E+
Sbjct: 193 IKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKKHEEEEAKAEREK 250
Score = 29.3 bits (65), Expect = 1.3
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 618 EEEEEEEEVQEEEEEEEEEEEEE 640
+++E E+ +++ EEEE + E E+
Sbjct: 228 KQKEVEQLIKKHEEEEAKAEREK 250
Score = 28.5 bits (63), Expect = 2.4
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 622 EEEEVQEEEEEEEEEEEEEEEEE 644
+++EV++ ++ EEEE + E E+
Sbjct: 228 KQKEVEQLIKKHEEEEAKAEREK 250
Score = 27.7 bits (61), Expect = 4.1
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 619 EEEEEEEVQEEEEEEEEEEEEEE 641
+++E E++ ++ EEEE + E E+
Sbjct: 228 KQKEVEQLIKKHEEEEAKAEREK 250
Score = 27.7 bits (61), Expect = 4.4
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 576 KTSDQDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEE 630
KT D ++ + ++E I + R + +++E E+ ++ EEEE + + E+
Sbjct: 198 KTMDVSKLSAEKVE--IATLTRENGKTVIRVLKQKEVEQLIKKHEEEEAKAEREK 250
Score = 27.3 bits (60), Expect = 6.2
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 619 EEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
E + ++ +++E E+ ++ EEEE + E E+
Sbjct: 217 RENGKTVIRVLKQKEVEQLIKKHEEEEAKAEREK 250
Score = 27.0 bits (59), Expect = 7.0
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 617 EEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEE 650
E + V +++E E+ ++ EEEE + E E+
Sbjct: 217 RENGKTVIRVLKQKEVEQLIKKHEEEEAKAEREK 250
>d1fuia2 c.85.1.1 (A:1-355) L-fucose isomerase, N-terminal and
second domains {Escherichia coli [TaxId: 562]}
Length = 355
Score = 30.2 bits (68), Expect = 0.72
Identities = 11/66 (16%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 580 QDEIGSPRIENI--IQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEE 637
+ +G +++ + +L RR +++ +E E E ++ E+E ++ + E+
Sbjct: 198 ESWLG-MKVQAVDMTELRRRIDQKIYDEAELEMALAWADKNFRYGEDENNKQYQRNAEQS 256
Query: 638 EEEEEE 643
E
Sbjct: 257 RAVLRE 262
>d1m5ya1 a.223.1.2 (A:25-164,A:395-427) Porin chaperone SurA,
peptide-binding domain {Escherichia coli [TaxId: 562]}
Length = 173
Score = 29.7 bits (66), Expect = 0.78
Identities = 11/59 (18%), Positives = 20/59 (33%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEE 645
R E II +R E +E E ++ + + + EE +E+
Sbjct: 109 RKEMIISEVRNNEVRRRITILPQEVESLAQQVDRAYRMLMNRKFSEEAASWMQEQRASA 167
>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 216
Score = 29.8 bits (66), Expect = 0.81
Identities = 13/98 (13%), Positives = 36/98 (36%), Gaps = 5/98 (5%)
Query: 587 RIENIIQLIRRGERE----EEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEE 642
I+ ++ + RRG + E E + + + + E + + +E+ + ++
Sbjct: 82 GIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNI 141
Query: 643 EEEEEEEEEEVRGGGKE-EISLHFYVLYVLSKGKIAGL 679
+ + E R G + + + K K+ +
Sbjct: 142 KVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERI 179
>d1h7ca_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 103
Score = 28.5 bits (64), Expect = 0.89
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 23/92 (25%)
Query: 586 PRIENII---QLIRRGEREE---EEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEE-- 637
PR+ I ++RR +E E+E +++EE+ E+ E+ E +++++ E +E
Sbjct: 1 PRVRQIKIKTGVVRRLVKERVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMM 60
Query: 638 ---------------EEEEEEEEEEEEEEEVR 654
+ E E++ EE EE +
Sbjct: 61 IPDCQRRLEAAYLDLQRILENEKDLEEAEEYK 92
Score = 27.3 bits (61), Expect = 2.1
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 23/79 (29%)
Query: 599 EREEEEEEE--EEEEEEEEEEEEEEEEEEVQEEEE---------------------EEEE 635
E+E +++EE E+ E+ E + +++ E+ +E E E+
Sbjct: 24 EKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLDLQRILENEK 83
Query: 636 EEEEEEEEEEEEEEEEEVR 654
+ EE EE +E + V+
Sbjct: 84 DLEEAEEYKEARLVLDSVK 102
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal
domain {Bacillus stearothermophilus [TaxId: 1422]}
Length = 323
Score = 29.9 bits (66), Expect = 0.90
Identities = 7/28 (25%), Positives = 11/28 (39%)
Query: 621 EEEEEVQEEEEEEEEEEEEEEEEEEEEE 648
EE V + E E++ E+ E
Sbjct: 294 EENGRVISVWKVEAEDKTEKLAAALEHH 321
Score = 29.2 bits (64), Expect = 1.7
Identities = 13/64 (20%), Positives = 18/64 (28%), Gaps = 14/64 (21%)
Query: 562 TNKLKTIRPSIKVWKTSDQDEIGSPRIENIIQLIRRGEREE-------EEEEEEEEEEEE 614
T K IKV D R N ++ E E E++ E+
Sbjct: 265 TEKSFIET--IKVGDIRFSD-----RYSNGSFVLDEEENGRVISVWKVEAEDKTEKLAAA 317
Query: 615 EEEE 618
E
Sbjct: 318 LEHH 321
Score = 28.8 bits (63), Expect = 2.4
Identities = 7/28 (25%), Positives = 11/28 (39%)
Query: 618 EEEEEEEEVQEEEEEEEEEEEEEEEEEE 645
EE V + E E++ E+ E
Sbjct: 294 EENGRVISVWKVEAEDKTEKLAAALEHH 321
Score = 27.6 bits (60), Expect = 4.8
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 620 EEEEEEVQEEEEEEEEEEEEEEEEEEEE 647
EE + + E E++ E+ E
Sbjct: 294 EENGRVISVWKVEAEDKTEKLAAALEHH 321
Score = 27.6 bits (60), Expect = 5.0
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 608 EEEEEEEEEEEEEEEE 623
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHH 321
Score = 27.6 bits (60), Expect = 5.0
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 609 EEEEEEEEEEEEEEEE 624
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHH 321
Score = 27.6 bits (60), Expect = 5.0
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 634 EEEEEEEEEEEEEEEE 649
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHH 321
Score = 27.6 bits (60), Expect = 5.0
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 635 EEEEEEEEEEEEEEEE 650
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHH 321
Score = 27.6 bits (60), Expect = 5.0
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 636 EEEEEEEEEEEEEEEE 651
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHH 321
Score = 27.6 bits (60), Expect = 5.0
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 637 EEEEEEEEEEEEEEEE 652
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHH 321
>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate
dehydrogenase (PP module) {Human (Homo sapiens) [TaxId:
9606]}
Length = 361
Score = 29.9 bits (66), Expect = 1.0
Identities = 10/60 (16%), Positives = 20/60 (33%)
Query: 593 QLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
+++ EE +E + E +E E+ + E EE + E +
Sbjct: 294 RMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEVRGANQ 353
Score = 29.1 bits (64), Expect = 1.9
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 608 EEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRG 655
EE +E + E +E E+ Q + E EE + EVRG
Sbjct: 303 VEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEVRG 350
Score = 26.8 bits (58), Expect = 9.7
Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Query: 605 EEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEE------EEEEEEEEEEEEEEEEVR 654
EE +E + E +E E+ + + E EE + E + + +
Sbjct: 303 VEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEVRGANQWIKFK 358
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 124
Score = 28.8 bits (64), Expect = 1.0
Identities = 6/35 (17%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 42 RSKDLDLLLQRFQHTLDEIHKW-SDLNGTIFSTDP 75
R + L+ L ++F+ W + D
Sbjct: 8 RLERLEHLAEKFRQKASTHETWAYGKEQILLQKDY 42
>d1tuga1 c.78.1.1 (A:1-150,A:151-310) Aspartate carbamoyltransferase
catalytic subunit {Escherichia coli [TaxId: 562]}
Length = 310
Score = 29.1 bits (64), Expect = 1.6
Identities = 7/32 (21%), Positives = 12/32 (37%), Gaps = 4/32 (12%)
Query: 419 LKLCKKDITFMWCPSHCGIKGNEIVDVAAKNP 450
L K ++ + H + +EI K P
Sbjct: 254 LHNAKANMKVL----HPLPRVDEIATDVDKTP 281
>d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 146
Score = 28.1 bits (62), Expect = 1.9
Identities = 10/53 (18%), Positives = 12/53 (22%)
Query: 603 EEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRG 655
E E E + EE EE EE E+
Sbjct: 84 ANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFHEKRFLD 136
Score = 27.3 bits (60), Expect = 3.9
Identities = 10/50 (20%), Positives = 12/50 (24%)
Query: 602 EEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEE 651
E E E +EE EE EE E+
Sbjct: 84 ANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFHEKR 133
Score = 26.2 bits (57), Expect = 8.5
Identities = 10/43 (23%), Positives = 12/43 (27%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEE 643
E E E EE EE+ EE E+
Sbjct: 91 AGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFHEKR 133
>d1qsda_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Baker's yeast
(Saccharomyces cerevisiae), Rbl2p [TaxId: 4932]}
Length = 102
Score = 27.3 bits (61), Expect = 2.3
Identities = 8/79 (10%), Positives = 30/79 (37%), Gaps = 24/79 (30%)
Query: 599 EREEEEEEEEEEEEEEEEEEEE---EEEEEVQEEEE---------------------EEE 634
++E +++E + +E++ + +++EEV ++ + +
Sbjct: 21 QQELKDQEAHVAKLKEDKSVDPYDLKKQEEVLDDTKRLLPTLYEKIREFKEDLEQFLKTY 80
Query: 635 EEEEEEEEEEEEEEEEEEV 653
+ E+ + +E+
Sbjct: 81 QGTEDVSDARSAITSAQEL 99
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 107
Score = 27.1 bits (60), Expect = 2.7
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 565 LKTIRPSIKVWKTSDQDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEE 624
L +V+K+S I + E +L + + E + E+ E +EE ++ +
Sbjct: 41 LSRAADDAEVYKSSGNILIRVAKDELTEEL----QEKLETLQLREKTIERQEERVMKKLQ 96
Query: 625 EVQEEEEE 632
E+Q +E
Sbjct: 97 EMQVNIQE 104
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp.,
ksm-k38 [TaxId: 1409]}
Length = 390
Score = 28.5 bits (62), Expect = 2.7
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 458 KLCTPEDFKPFVTALMNSEWQNLWDNVPN 486
K T + + +L +++ D V N
Sbjct: 76 KYGTKAQLERAIGSLKSNDINVYGDVVMN 104
Score = 28.1 bits (61), Expect = 3.6
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 533 KLCTPEDFKPFVTALMNSEWQSLWDNVPN 561
K T + + +L +++ D V N
Sbjct: 76 KYGTKAQLERAIGSLKSNDINVYGDVVMN 104
>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 135
Score = 27.4 bits (60), Expect = 2.8
Identities = 6/74 (8%), Positives = 16/74 (21%)
Query: 581 DEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEE 640
+ + + E E + +++ +EE +
Sbjct: 60 ALVAEMEPGYEKPTVAAPSAYSCDLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHV 119
Query: 641 EEEEEEEEEEEEVR 654
+ E R
Sbjct: 120 FTRAKLAESVHAER 133
>d2crua1 a.5.6.1 (A:8-112) Programmed cell death protein 5 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 27.0 bits (60), Expect = 2.8
Identities = 6/33 (18%), Positives = 14/33 (42%)
Query: 595 IRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQ 627
+RR E + + + + ++E + E E
Sbjct: 1 LRRQRLAELQAKHGDPGDAAQQEAKHREAEMRN 33
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex
aeolicus [TaxId: 63363]}
Length = 77
Score = 26.3 bits (58), Expect = 2.8
Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 584 GSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEE-------EE 636
GS ++ + I+ + +E+ E +EE +E EE+ + ++ EE
Sbjct: 1 GSRQVREKERRIKEVVEKLKEKLGREPTDEEVAKELGISTEELFKTLDKINFSYILSLEE 60
Query: 637 EEEEEEEEEEE 647
+ + E
Sbjct: 61 VFRDFARDYSE 71
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional)
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 368
Score = 28.3 bits (62), Expect = 3.1
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 620 EEEEEEVQEEEEEEEEEEEEEEEEEEEEEEE 650
+ EE+ E++ E E +E+ + E
Sbjct: 2 RQRTEELLRCNEQQAAELETCKEQLFQSNME 32
>d1fcya_ a.123.1.1 (A:) Retinoic acid receptor gamma (RAR-gamma)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 236
Score = 28.1 bits (62), Expect = 3.2
Identities = 5/44 (11%), Positives = 17/44 (38%)
Query: 584 GSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQ 627
SP++E +I + + +E + + + + ++
Sbjct: 1 ASPQLEELITKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLG 44
>d1v64a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 108
Score = 26.8 bits (59), Expect = 3.8
Identities = 9/42 (21%), Positives = 25/42 (59%)
Query: 605 EEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
++E++ ++ ++++++ E E+ E EEE++ EE+
Sbjct: 57 QKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEK 98
Score = 26.5 bits (58), Expect = 4.9
Identities = 9/42 (21%), Positives = 24/42 (57%)
Query: 602 EEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEE 643
++E++ ++ ++++++ E E E EEE++ EE+
Sbjct: 57 QKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEK 98
Score = 26.1 bits (57), Expect = 6.6
Identities = 9/50 (18%), Positives = 25/50 (50%)
Query: 608 EEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGG 657
++E++ ++ ++++++ E E EEE++ EE+ + G
Sbjct: 57 QKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNISGPS 106
Score = 25.7 bits (56), Expect = 9.1
Identities = 8/42 (19%), Positives = 25/42 (59%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEE 642
++E++ ++ ++++++ E E ++ EEE++ EE+
Sbjct: 57 QKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEK 98
>d1izma_ a.199.1.1 (A:) Hypothetical protein HI0817 {Haemophilus
influenzae [TaxId: 727]}
Length = 170
Score = 27.5 bits (61), Expect = 4.0
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 615 EEEEEEEEEEEVQEEEEE-----EEEEEEEEEEEEEEEEEEEEVR 654
E +E+ E E ++ ++ +E++ EEE E EE E VR
Sbjct: 115 ELAKEKGEIGEAVDDLQDICQLGYDEDDNEEELAEALEEIIEYVR 159
Score = 26.3 bits (58), Expect = 8.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 607 EEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEE 648
E +E+ E E ++ ++ Q +E++ EEE E EE E
Sbjct: 115 ELAKEKGEIGEAVDDLQDICQLGYDEDDNEEELAEALEEIIE 156
Score = 26.3 bits (58), Expect = 9.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 614 EEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEV 653
E +E+ E E V + ++ + +E++ EEE E EE+
Sbjct: 115 ELAKEKGEIGEAVDDLQDICQLGYDEDDNEEELAEALEEI 154
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse
gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 248
Score = 27.8 bits (61), Expect = 4.3
Identities = 13/64 (20%), Positives = 25/64 (39%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEE 646
IE+I L + + +E E E +EV+E ++ +E + ++
Sbjct: 107 TIEDIDSLSPQMVKLLAYLYRNVDEIERLLPAVERHIDEVREILKKVMGKERPQAKDVVV 166
Query: 647 EEEE 650
E E
Sbjct: 167 REGE 170
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus
thermophilus [TaxId: 274]}
Length = 343
Score = 28.0 bits (61), Expect = 4.3
Identities = 10/65 (15%), Positives = 17/65 (26%), Gaps = 4/65 (6%)
Query: 601 EEEEEEEEEEEEEEEEEEEEEEEEEVQE----EEEEEEEEEEEEEEEEEEEEEEEEVRGG 656
+ EEEE E + + + + E E +
Sbjct: 267 DLEEEEIEALLKAGPVPAHRVLARLLTAAYALPQIPPRIDRAFYESLGYAWEAFGRDKEA 326
Query: 657 GKEEI 661
G EE+
Sbjct: 327 GPEEV 331
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId:
1422]}
Length = 57
Score = 25.4 bits (56), Expect = 4.3
Identities = 6/42 (14%), Positives = 14/42 (33%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQE 628
++ + IR+ + E + E + E+V
Sbjct: 9 SLKEMGNKIRKAKDELSKTRGRAPTVTEIADHLGISPEDVVL 50
>d1k8kd2 d.198.2.1 (D:121-284) ARPC2 (34 kDa subunit) {Cow (Bos
taurus) [TaxId: 9913]}
Length = 164
Score = 27.4 bits (61), Expect = 4.3
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 289 WSNSPPPVDLSLCDGKKSDSAPVVFQSLFREAINTKYTSHTICY 332
+S+ PP++L D D+ + LF N +TI
Sbjct: 80 FSHREPPLELKDTDAAVGDNIGYITFVLFPRHTNASARDNTINL 123
>d2o9ca2 d.110.3.9 (A:4-130) Bacteriophytochrome BphP {Deinococcus
radiodurans [TaxId: 1299]}
Length = 127
Score = 26.7 bits (59), Expect = 5.4
Identities = 5/18 (27%), Positives = 7/18 (38%)
Query: 285 FTPPWSNSPPPVDLSLCD 302
F PP P + C+
Sbjct: 5 FFPPLYLGGPEITTENCE 22
>d1n3ka_ a.77.1.4 (A:) PEA-15 (phosphoprotein enriched in astrocytes
15 kDa) {Chinese hamster (Cricetulus griseus) [TaxId:
10029]}
Length = 130
Score = 26.7 bits (59), Expect = 5.5
Identities = 11/57 (19%), Positives = 25/57 (43%)
Query: 588 IENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEE 644
IE+I ++ RR + + + EE+E + + ++ ++ + EEE
Sbjct: 63 IEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPSEEE 119
>d2p90a1 c.56.8.1 (A:6-274) Hypothetical protein Cgl1923
{Corynebacterium glutamicum [TaxId: 1718]}
Length = 269
Score = 27.3 bits (60), Expect = 5.7
Identities = 12/53 (22%), Positives = 21/53 (39%)
Query: 587 RIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEE 639
I + L E + E+ + E+ EE E + V E++ + E E
Sbjct: 215 SIADSADLNLPLLALERDAEKVHRQLMEQTEESSEIQRVVGALEQQYDSELER 267
>d1d7qa_ b.40.4.5 (A:) Translation initiation factor-1a, eIF1a
{Human (Homo sapiens) [TaxId: 9606]}
Length = 143
Score = 26.8 bits (59), Expect = 5.8
Identities = 5/47 (10%), Positives = 21/47 (44%)
Query: 579 DQDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEE 625
+ DE S + + + + +++E + ++ +++E+ +
Sbjct: 95 NADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDDDEDID 141
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon
Pyrococcus woesei [TaxId: 2262]}
Length = 361
Score = 27.5 bits (60), Expect = 6.1
Identities = 4/26 (15%), Positives = 9/26 (34%)
Query: 461 TPEDFKPFVTALMNSEWQNLWDNVPN 486
+ E+ + + + D V N
Sbjct: 85 SKEELVRLIQTAHAYGIKVIADVVIN 110
Score = 27.2 bits (59), Expect = 7.2
Identities = 4/26 (15%), Positives = 9/26 (34%)
Query: 536 TPEDFKPFVTALMNSEWQSLWDNVPN 561
+ E+ + + + D V N
Sbjct: 85 SKEELVRLIQTAHAYGIKVIADVVIN 110
>d2fkza1 a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1)
{Azotobacter vinelandii [TaxId: 354]}
Length = 154
Score = 26.6 bits (58), Expect = 6.3
Identities = 10/72 (13%), Positives = 24/72 (33%)
Query: 580 QDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEE 639
+ + + GE +E E + + E+ + + + + E E
Sbjct: 62 ILFLEGLPNLQELGKLLIGEHTKEMLECDLKLEQAGLPDLKAAIAYCESVGDYASRELLE 121
Query: 640 EEEEEEEEEEEE 651
+ E EE+ +
Sbjct: 122 DILESEEDHIDW 133
>d2iaza1 a.281.1.2 (A:1-111) Hypothetical protein SP1372
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 111
Score = 26.2 bits (58), Expect = 7.0
Identities = 5/51 (9%), Positives = 21/51 (41%)
Query: 600 REEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEE 650
+ ++ + E + + +EE+Q+ + + + + + E ++
Sbjct: 25 KAAKDAIAADAEASKIFTDYLAFQEEIQKLAQTGQMPDASFQAKMEGFGKQ 75
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 26.2 bits (57), Expect = 7.0
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 612 EEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEE 652
EE +EE+E + E+ E E+E + E +
Sbjct: 1 EELTDEEKEIINRVIARAEKMETMEQERIGRLVDRLETMRK 41
Score = 25.8 bits (56), Expect = 8.9
Identities = 12/48 (25%), Positives = 17/48 (35%)
Query: 613 EEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGGKEE 660
EE +EE+E V E+ E E+E + E G
Sbjct: 1 EELTDEEKEIINRVIARAEKMETMEQERIGRLVDRLETMRKNVAGDGV 48
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 110
Score = 26.1 bits (57), Expect = 7.4
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 50 LQRFQHTLDEIHKW-SDLNGTIFSTDPGKSV 79
Q F + + W S++ + S D GK +
Sbjct: 4 QQNFNTGIKDFDFWLSEVEALLASEDYGKDL 34
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId:
7242]}
Length = 107
Score = 25.7 bits (56), Expect = 7.5
Identities = 6/33 (18%), Positives = 11/33 (33%), Gaps = 1/33 (3%)
Query: 48 LLLQRFQHTLDEIHKW-SDLNGTIFSTDPGKSV 79
L LQ + + W S + + D +
Sbjct: 3 LDLQLYMRDCELAESWMSAREAFLNADDDANAG 35
>d2ot2a1 b.40.14.1 (A:1-90) Hydrogenase expression/formation protein
HypC {Escherichia coli [TaxId: 562]}
Length = 90
Score = 25.5 bits (56), Expect = 7.9
Identities = 5/31 (16%), Positives = 12/31 (38%)
Query: 612 EEEEEEEEEEEEEEVQEEEEEEEEEEEEEEE 642
E E + + + + + E + EE+
Sbjct: 60 NEAEARDTLDALQNMFDVEPDVGALLYGEEK 90
>d2omoa1 d.58.4.11 (A:1-98) Hypothetical protein NE0621
{Nitrosomonas europaea [TaxId: 915]}
Length = 98
Score = 25.7 bits (56), Expect = 8.2
Identities = 6/35 (17%), Positives = 10/35 (28%)
Query: 260 LCVRYKDITAFDNALESSTFAPYMRFTPPWSNSPP 294
L YK E++ + + W P
Sbjct: 52 LYEAYKTRKDAAAHKETAHYLTWRDTVADWMAEPR 86
>d1v63a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 101
Score = 25.6 bits (56), Expect = 8.8
Identities = 7/60 (11%), Positives = 24/60 (40%)
Query: 598 GEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEEEEEEEEEEEEEEEVRGGG 657
G R + + ++E ++ EE++ + + + + ++ +E + + G
Sbjct: 42 GSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSGPSSG 101
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 243
Score = 26.5 bits (58), Expect = 9.2
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 622 EEEEVQEEEEEEEEEEEEEEEEEE 645
EE+++ E E+E+EE E++++
Sbjct: 220 NPEEIEKYVAEIEKEKEENEKKKQ 243
>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon
Sulfolobus tokodaii [TaxId: 111955]}
Length = 141
Score = 26.2 bits (57), Expect = 9.7
Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 6/83 (7%)
Query: 580 QDEIGSPRIENIIQLIRRGEREEEEEEEEEEEEEEEEEEEEEEEEEVQEEEEEEEEEEEE 639
D I + + G E+ E E E + + +EE E E E
Sbjct: 59 LDFIRQGGLTDPATDKPIGTLEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFE 118
Query: 640 EEEEEEEEEEE------EEVRGG 656
E+ E ++++GG
Sbjct: 119 TLARAEKSHAEKFQNVLKQLKGG 141
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.134 0.401
Gapped
Lambda K H
0.267 0.0568 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,672,910
Number of extensions: 137076
Number of successful extensions: 2389
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1451
Number of HSP's successfully gapped: 272
Length of query: 682
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 591
Effective length of database: 1,158,166
Effective search space: 684476106
Effective search space used: 684476106
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (25.7 bits)