BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3429
(192 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q03372|HMSH_DROME Muscle segmentation homeobox OS=Drosophila melanogaster GN=Dr PE=2
SV=2
Length = 515
Score = 166 bits (419), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/97 (83%), Positives = 87/97 (89%), Gaps = 2/97 (2%)
Query: 21 SDSNKGDPPKLNVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHL 80
D+N +PP++ NLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSL L
Sbjct: 403 GDAN--EPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRL 460
Query: 81 TETQVKIWFQNRRAKAKRLQEAEIEKIKMSAIAAARP 117
TETQVKIWFQNRRAKAKRLQEAEIEKIKM+A+ P
Sbjct: 461 TETQVKIWFQNRRAKAKRLQEAEIEKIKMAALGRGAP 497
>sp|P15857|HM17_APIME Homeobox protein H17 (Fragment) OS=Apis mellifera PE=3 SV=1
Length = 79
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/79 (92%), Positives = 77/79 (97%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHKPNRKPRTPFTTQQLLSLEKKFREKQYL+IAERAEFSSSLHLTETQVKIWFQNR
Sbjct: 1 CTLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLTIAERAEFSSSLHLTETQVKIWFQNR 60
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAEIEK+++SA
Sbjct: 61 RAKAKRLQEAEIEKLRLSA 79
>sp|Q03357|MSXA_DANRE Homeobox protein MSH-A OS=Danio rerio GN=msxa PE=2 SV=2
Length = 257
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 105/165 (63%), Gaps = 18/165 (10%)
Query: 15 LSSPLLSDSNKGDPPKLNVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEF 74
++ P LS S + P + LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEF
Sbjct: 97 INKPRLSTSPRSQSPTI-CPLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEF 155
Query: 75 SSSLHLTETQVKIWFQNRRAKAKRLQEAEIEKIKMSAIAAARPHPLYGPGPSPHLHQYFQ 134
SSSL LTETQVKIWFQNRRAKAKRLQEAE+E+ KM++ P+ PG +
Sbjct: 156 SSSLSLTETQVKIWFQNRRAKAKRLQEAELERFKMAS------KPILHPGLTL------- 202
Query: 135 HASPEALLHHPHPFSALLGR-HPAMAHFMPAAPMPQNSPPGGSDM 178
P L P + + G+ P H +P AP+ S P G M
Sbjct: 203 ---PFPLCTQPQTAALVCGQSFPFSRHMLPFAPIGIYSTPMGYSM 244
>sp|P35993|HOX7P_XENLA Homeobox protein XHOX-7.1' (Fragment) OS=Xenopus laevis PE=2 SV=1
Length = 291
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 76/80 (95%)
Query: 32 NVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQN 91
+ LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL+LTETQVKIWFQN
Sbjct: 151 SCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQN 210
Query: 92 RRAKAKRLQEAEIEKIKMSA 111
RRAKAKRLQEAEIEK+KM+A
Sbjct: 211 RRAKAKRLQEAEIEKLKMAA 230
>sp|P50223|HMGX7_CHICK Homeobox protein GHOX-7 OS=Gallus gallus GN=GHOX-7 PE=2 SV=1
Length = 288
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 153 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 212
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 213 RAKAKRLQEAELEKLKMAA 231
>sp|Q2VL80|MSX1_PERPO Homeobox protein MSX-1 OS=Perodicticus potto edwarsi GN=MSX1 PE=3
SV=1
Length = 297
Score = 143 bits (360), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|P23410|MSX2_COTJA Homeobox protein MSX-2 OS=Coturnix coturnix japonica GN=MSX2 PE=2
SV=1
Length = 259
Score = 143 bits (360), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/81 (85%), Positives = 76/81 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL+LTETQVKIWFQNR
Sbjct: 126 CTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNR 185
Query: 93 RAKAKRLQEAEIEKIKMSAIA 113
RAKAKRLQEAE+EK+KM+A A
Sbjct: 186 RAKAKRLQEAELEKLKMAANA 206
>sp|Q9GK08|MSX2_CANFA Homeobox protein MSX-2 OS=Canis familiaris GN=MSX2 PE=2 SV=1
Length = 267
Score = 143 bits (360), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 75/80 (93%)
Query: 32 NVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQN 91
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL+LTETQVKIWFQN
Sbjct: 133 TCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQN 192
Query: 92 RRAKAKRLQEAEIEKIKMSA 111
RRAKAKRLQEAE+EK+KM+A
Sbjct: 193 RRAKAKRLQEAELEKLKMAA 212
>sp|Q2VL86|MSX1_SAIBB Homeobox protein MSX-1 OS=Saimiri boliviensis boliviensis GN=MSX1
PE=3 SV=1
Length = 297
Score = 143 bits (360), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|Q2VL82|MSX1_SAGOE Homeobox protein MSX-1 OS=Saguinus oedipus GN=MSX1 PE=3 SV=1
Length = 297
Score = 142 bits (359), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|Q2VL79|MSX1_DAUMA Homeobox protein MSX-1 OS=Daubentonia madagascariensis GN=MSX1 PE=3
SV=1
Length = 297
Score = 142 bits (359), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|Q2VL77|MSX1_LEPED Homeobox protein MSX-1 OS=Lepilemur edwardsi GN=MSX1 PE=3 SV=1
Length = 297
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|Q2VL78|MSX1_LEMCA Homeobox protein MSX-1 OS=Lemur catta GN=MSX1 PE=3 SV=1
Length = 297
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|Q03358|MSX2_MOUSE Homeobox protein MSX-2 OS=Mus musculus GN=Msx2 PE=1 SV=2
Length = 267
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 75/80 (93%)
Query: 32 NVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQN 91
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL+LTETQVKIWFQN
Sbjct: 133 TCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQN 192
Query: 92 RRAKAKRLQEAEIEKIKMSA 111
RRAKAKRLQEAE+EK+KM+A
Sbjct: 193 RRAKAKRLQEAELEKLKMAA 212
>sp|P13297|MSX1_MOUSE Homeobox protein MSX-1 OS=Mus musculus GN=Msx1 PE=1 SV=3
Length = 297
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|Q04281|HOX71_XENLA Homeobox protein XHOX-7.1 (Fragment) OS=Xenopus laevis PE=2 SV=1
Length = 295
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 75/77 (97%)
Query: 35 LRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNRRA 94
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL+LTETQVKIWFQNRRA
Sbjct: 164 LRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRA 223
Query: 95 KAKRLQEAEIEKIKMSA 111
KAKRLQEAE+EK+KM+A
Sbjct: 224 KAKRLQEAELEKLKMAA 240
>sp|A1YG93|MSX2_PANPA Homeobox protein MSX-2 OS=Pan paniscus GN=MSX2 PE=3 SV=1
Length = 267
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 75/80 (93%)
Query: 32 NVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQN 91
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL+LTETQVKIWFQN
Sbjct: 133 TCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQN 192
Query: 92 RRAKAKRLQEAEIEKIKMSA 111
RRAKAKRLQEAE+EK+KM+A
Sbjct: 193 RRAKAKRLQEAELEKLKMAA 212
>sp|P35548|MSX2_HUMAN Homeobox protein MSX-2 OS=Homo sapiens GN=MSX2 PE=1 SV=3
Length = 267
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 75/80 (93%)
Query: 32 NVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQN 91
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL+LTETQVKIWFQN
Sbjct: 133 TCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQN 192
Query: 92 RRAKAKRLQEAEIEKIKMSA 111
RRAKAKRLQEAE+EK+KM+A
Sbjct: 193 RRAKAKRLQEAELEKLKMAA 212
>sp|A1YF16|MSX2_GORGO Homeobox protein MSX-2 OS=Gorilla gorilla gorilla GN=MSX2 PE=3 SV=1
Length = 267
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 75/80 (93%)
Query: 32 NVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQN 91
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL+LTETQVKIWFQN
Sbjct: 133 TCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQN 192
Query: 92 RRAKAKRLQEAEIEKIKMSA 111
RRAKAKRLQEAE+EK+KM+A
Sbjct: 193 RRAKAKRLQEAELEKLKMAA 212
>sp|Q2VL83|MSX1_LEORO Homeobox protein MSX-1 OS=Leontopithecus rosalia GN=MSX1 PE=3 SV=1
Length = 297
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|Q2VL85|MSX1_CALGO Homeobox protein MSX-1 OS=Callimico goeldii GN=MSX1 PE=3 SV=1
Length = 297
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|O02786|MSX1_BOVIN Homeobox protein MSX-1 OS=Bos taurus GN=MSX1 PE=2 SV=1
Length = 297
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|Q2VL84|MSX1_CALJA Homeobox protein MSX-1 OS=Callithrix jacchus GN=MSX1 PE=3 SV=1
Length = 297
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|Q0P5C3|MSX2_BOVIN Homeobox protein MSX-2 OS=Bos taurus GN=MSX2 PE=2 SV=1
Length = 267
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 75/80 (93%)
Query: 32 NVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQN 91
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL+LTETQVKIWFQN
Sbjct: 133 TCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQN 192
Query: 92 RRAKAKRLQEAEIEKIKMSA 111
RRAKAKRLQEAE+EK+KM+A
Sbjct: 193 RRAKAKRLQEAELEKLKMAA 212
>sp|Q2VL76|MSX1_PROCO Homeobox protein MSX-1 OS=Propithecus coquereli GN=MSX1 PE=3 SV=1
Length = 297
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|P52953|MSX2_RAT Homeobox protein MSX-2 (Fragment) OS=Rattus norvegicus GN=Msx2 PE=3
SV=1
Length = 139
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 75/80 (93%)
Query: 32 NVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQN 91
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL+LTETQVKIWFQN
Sbjct: 5 TCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQN 64
Query: 92 RRAKAKRLQEAEIEKIKMSA 111
RRAKAKRLQEAE+EK+KM+A
Sbjct: 65 RRAKAKRLQEAELEKLKMAA 84
>sp|Q2VL88|MSX1_PANTR Homeobox protein MSX-1 OS=Pan troglodytes GN=MSX1 PE=3 SV=1
Length = 297
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|P28360|MSX1_HUMAN Homeobox protein MSX-1 OS=Homo sapiens GN=MSX1 PE=1 SV=2
Length = 297
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|Q2VL87|MSX1_MACMU Homeobox protein MSX-1 OS=Macaca mulatta GN=MSX1 PE=3 SV=1
Length = 297
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 158 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 217
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 218 RAKAKRLQEAELEKLKMAA 236
>sp|P28362|MSX2_CHICK Homeobox protein MSX-2 OS=Gallus gallus GN=MSX2 PE=2 SV=2
Length = 259
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 75/79 (94%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL+LTETQVKIWFQNR
Sbjct: 126 CTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNR 185
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 186 RAKAKRLQEAELEKLKMAA 204
>sp|P28361|MSX1_CHICK Homeobox protein MSX-1 OS=Gallus gallus GN=MSX1 PE=2 SV=1
Length = 249
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNR
Sbjct: 114 CTLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNR 173
Query: 93 RAKAKRLQEAEIEKIKMSA 111
RAKAKRLQEAE+EK+KM+A
Sbjct: 174 RAKAKRLQEAELEKLKMAA 192
>sp|Q01703|MSXC_DANRE Homeobox protein MSH-C OS=Danio rerio GN=msxc PE=2 SV=1
Length = 273
Score = 140 bits (354), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/107 (69%), Positives = 83/107 (77%), Gaps = 13/107 (12%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFS+SL+LTETQVKIWFQNR
Sbjct: 143 CTLRKHKNNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSNSLNLTETQVKIWFQNR 202
Query: 93 RAKAKRLQEAEIEKIKMSAI----AAARPH---------PLYGPGPS 126
RAKAKRLQEAE+EK+K++ A A P PLYGP S
Sbjct: 203 RAKAKRLQEAELEKLKLATKPLLPAFAFPFPLGTHVGSPPLYGPSSS 249
>sp|Q01704|MSXD_DANRE Homeobox protein MSH-D OS=Danio rerio GN=msxd PE=2 SV=1
Length = 226
Score = 140 bits (353), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/84 (82%), Positives = 77/84 (91%)
Query: 35 LRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNRRA 94
LRKHK NRKPRTPFTT QLL+LE+KFR+KQYLSIAERAEFSSSL LTETQVKIWFQNRRA
Sbjct: 94 LRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLTLTETQVKIWFQNRRA 153
Query: 95 KAKRLQEAEIEKIKMSAIAAARPH 118
KAKRLQEAE+EK+K++A A P+
Sbjct: 154 KAKRLQEAELEKLKLTAKPALHPN 177
>sp|Q623D4|VAB15_CAEBR Homeobox protein vab-15 OS=Caenorhabditis briggsae GN=vab-15 PE=3
SV=1
Length = 226
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 81/98 (82%), Gaps = 5/98 (5%)
Query: 22 DSNKGDPPKLNVNL-----RKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSS 76
DS D K+ + L RKHK NRKPRTPF+TQQL+SLE+KF+ KQYLSIAERAEFS+
Sbjct: 111 DSPTSDDAKIQIGLTKCMLRKHKNNRKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSA 170
Query: 77 SLHLTETQVKIWFQNRRAKAKRLQEAEIEKIKMSAIAA 114
SL LTETQVKIWFQNRRAK+KRLQEAE+EK+K + ++A
Sbjct: 171 SLQLTETQVKIWFQNRRAKSKRLQEAEVEKVKFAQVSA 208
>sp|Q03356|MSXB_DANRE Homeobox protein MSH-B OS=Danio rerio GN=msxb PE=2 SV=3
Length = 257
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/101 (69%), Positives = 78/101 (77%), Gaps = 10/101 (9%)
Query: 33 VNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNR 92
LRKHK NRKPRTPF+T QLLSLE+KFR+KQYLSIAERAEFS+SL+LTETQVKIWFQNR
Sbjct: 131 CTLRKHKTNRKPRTPFSTSQLLSLERKFRQKQYLSIAERAEFSNSLNLTETQVKIWFQNR 190
Query: 93 RAKAKRLQEAEIEKIKMSA----------IAAARPHPLYGP 123
RAKAKRLQEAE+EK K ++ P LYGP
Sbjct: 191 RAKAKRLQEAELEKFKCASKPLLAPFALPFPLGSPSSLYGP 231
>sp|P70354|MSX3_MOUSE Homeobox protein MSX-3 OS=Mus musculus GN=Msx3 PE=1 SV=1
Length = 204
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 78/92 (84%), Gaps = 5/92 (5%)
Query: 34 NLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNRR 93
LRKHK NRKPRTPFTT QLL+LE+KF +KQYLSIAERAEFSSSL LTETQVKIWFQNRR
Sbjct: 80 TLRKHKTNRKPRTPFTTAQLLALERKFHQKQYLSIAERAEFSSSLSLTETQVKIWFQNRR 139
Query: 94 AKAKRLQEAEIEKIKMSA-----IAAARPHPL 120
AKAKRLQEAE+EK+K++A A A P PL
Sbjct: 140 AKAKRLQEAELEKLKLAAKPLLPAAFALPFPL 171
>sp|A2T764|MSX2_PANTR Homeobox protein MSX-2 OS=Pan troglodytes GN=MSX2 PE=3 SV=1
Length = 267
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/80 (82%), Positives = 73/80 (91%)
Query: 32 NVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQN 91
LRKHK NRKPR FTT QLL+LE+KFR+KQYLSIAERAEFSSSL+LTETQVKIWFQN
Sbjct: 133 TCTLRKHKTNRKPRXXFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQN 192
Query: 92 RRAKAKRLQEAEIEKIKMSA 111
RRAKAKRLQEAE+EK+KM+A
Sbjct: 193 RRAKAKRLQEAELEKLKMAA 212
>sp|Q09604|VAB15_CAEEL Homeobox protein vab-15 OS=Caenorhabditis elegans GN=vab-15 PE=2
SV=1
Length = 225
Score = 136 bits (343), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 77/93 (82%), Gaps = 5/93 (5%)
Query: 22 DSNKGDPPKLNVNL-----RKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSS 76
DS D K+ + L RKHK NRKPRTPF+TQQL+SLE+KF+ KQYLSIAERAEFS+
Sbjct: 105 DSPTSDDAKIQIGLSKCMLRKHKNNRKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSA 164
Query: 77 SLHLTETQVKIWFQNRRAKAKRLQEAEIEKIKM 109
SL LTETQVKIWFQNRRAK+KRLQEAE+EK+K
Sbjct: 165 SLQLTETQVKIWFQNRRAKSKRLQEAEVEKVKF 197
>sp|Q26656|HMX_STRPU Homeobox protein Hmx (Fragment) OS=Strongylocentrotus purpuratus
GN=HMX PE=2 SV=1
Length = 405
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 61/106 (57%)
Query: 39 KPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNRRAKAKR 98
K +K RT F+ Q+ LE F K+YLS +ERA +++LHLTETQVKIWFQNRR K KR
Sbjct: 251 KKKKKTRTVFSRSQVFQLESTFEVKRYLSSSERAGLAANLHLTETQVKIWFQNRRNKWKR 310
Query: 99 LQEAEIEKIKMSAIAAARPHPLYGPGPSPHLHQYFQHASPEALLHH 144
AE+E ++ A R + H+H Y Q +L+H
Sbjct: 311 QMAAELESANLAHAAQIRAQANLAQVSAVHVHAYAQRMVRVPILYH 356
>sp|Q90XN9|HMX3B_ORYLA Homeobox protein HMX3-B OS=Oryzias latipes GN=hmx3b PE=2 SV=1
Length = 290
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 64/120 (53%), Gaps = 24/120 (20%)
Query: 42 RKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNRRAKAKRLQE 101
+K RT F+ Q+ LE F K+YLS +ERA ++SLHLTETQVKIWFQNRR K KR
Sbjct: 167 KKTRTVFSRSQVFQLESTFDIKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLA 226
Query: 102 AEIEKIKMSAIAAAR-------------PHPLYGPGPS----------PHLHQYFQHASP 138
AE+E MS AA R P GPG + PH H Y+ +A P
Sbjct: 227 AELEAANMSHAAAQRIVRVPILYHDSGAPEATGGPGTNSPGGQPLLSFPH-HMYYSNAVP 285
>sp|Q0P4W6|HMX3_XENTR Homeobox protein HMX3 OS=Xenopus tropicalis GN=hmx3 PE=2 SV=1
Length = 306
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 22 DSNKGDPPKLNVNLRKHKPNRKP------RTPFTTQQLLSLEKKFREKQYLSIAERAEFS 75
+ K D + R+ P++KP RT F+ Q+ LE F K+YLS +ERA +
Sbjct: 153 EEGKKDDSGEDWKKREESPDKKPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLA 212
Query: 76 SSLHLTETQVKIWFQNRRAKAKRLQEAEIEKIKMSAIAAAR 116
+SLHLTETQVKIWFQNRR K KR AE+E +S AA R
Sbjct: 213 ASLHLTETQVKIWFQNRRNKWKRQLAAELEAANLSHAAAQR 253
>sp|Q8JJ64|HMX3_XENLA Homeobox protein HMX3 OS=Xenopus laevis GN=hmx3 PE=1 SV=1
Length = 306
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 22 DSNKGDPPKLNVNLRKHKPNRKP------RTPFTTQQLLSLEKKFREKQYLSIAERAEFS 75
+ K D + R+ P++KP RT F+ Q+ LE F K+YLS +ERA +
Sbjct: 153 EEGKKDDSGEDWKKREDSPDKKPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLA 212
Query: 76 SSLHLTETQVKIWFQNRRAKAKRLQEAEIEKIKMSAIAAAR 116
+SLHLTETQVKIWFQNRR K KR AE+E +S AA R
Sbjct: 213 ASLHLTETQVKIWFQNRRNKWKRQLAAELEAANLSHAAAQR 253
>sp|P50574|DLX2A_DANRE Homeobox protein Dlx2a OS=Danio rerio GN=dlx2a PE=2 SV=1
Length = 270
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Query: 15 LSSPLLSDSNKGD-PPKLNVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAE 73
SSP +D+ K + P++ + K K RKPRT ++T QL +L+++F++ QYL++ ERAE
Sbjct: 96 CSSPTPADAEKEEREPEIRMVNGKPKKVRKPRTIYSTFQLAALQRRFQKTQYLALPERAE 155
Query: 74 FSSSLHLTETQVKIWFQNRRAKAKRL-QEAEIEKIKMSAIAAARPHP 119
++SL LT+TQVKIWFQNRR+K K+L + EI + A + PHP
Sbjct: 156 LAASLGLTQTQVKIWFQNRRSKFKKLWKSGEIPPEQHVASGESPPHP 202
>sp|P56177|DLX1_HUMAN Homeobox protein DLX-1 OS=Homo sapiens GN=DLX1 PE=2 SV=3
Length = 255
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 59/80 (73%)
Query: 37 KHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNRRAKA 96
K K RKPRT +++ QL +L ++F++ QYL++ ERAE ++SL LT+TQVKIWFQN+R+K
Sbjct: 124 KGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKF 183
Query: 97 KRLQEAEIEKIKMSAIAAAR 116
K+L + ++ SA+A R
Sbjct: 184 KKLMKQGGAALEGSALANGR 203
>sp|Q64317|DLX1_MOUSE Homeobox protein DLX-1 OS=Mus musculus GN=Dlx1 PE=2 SV=1
Length = 255
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 59/80 (73%)
Query: 37 KHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNRRAKA 96
K K RKPRT +++ QL +L ++F++ QYL++ ERAE ++SL LT+TQVKIWFQN+R+K
Sbjct: 124 KGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKF 183
Query: 97 KRLQEAEIEKIKMSAIAAAR 116
K+L + ++ SA+A R
Sbjct: 184 KKLMKQGGAALEGSALANGR 203
>sp|Q98875|DLX1A_DANRE Homeobox protein Dlx1a OS=Danio rerio GN=dlx1a PE=2 SV=1
Length = 252
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 58/80 (72%)
Query: 37 KHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNRRAKA 96
K K RKPRT +++ QL +L ++F++ QYL++ ERAE ++SL LT+TQVKIWFQN+R+K
Sbjct: 124 KGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKF 183
Query: 97 KRLQEAEIEKIKMSAIAAAR 116
K+L + I +A+A R
Sbjct: 184 KKLMKQGGGTIDTNALANGR 203
>sp|Q14549|GBX1_HUMAN Homeobox protein GBX-1 OS=Homo sapiens GN=GBX1 PE=2 SV=2
Length = 363
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 15 LSSPLLSDSNKGDPPKLNVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEF 74
L L + + +G P V K R+ RT FT++QLL LEK+F K+YLS+ ER++
Sbjct: 236 LKGSLGTGAEEGAPVTAGVTAPGGKSRRR-RTAFTSEQLLELEKEFHCKKYLSLTERSQI 294
Query: 75 SSSLHLTETQVKIWFQNRRAKAKRLQEAEI 104
+ +L L+E QVKIWFQNRRAK KR++ +
Sbjct: 295 AHALKLSEVQVKIWFQNRRAKWKRIKAGNV 324
>sp|P40764|DLX2_MOUSE Homeobox protein DLX-2 OS=Mus musculus GN=Dlx2 PE=2 SV=1
Length = 332
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 16 SSPLLSDSNKGD-PPKLNVNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEF 74
SSP+ ++ +K D P++ + K K RKPRT +++ QL +L+++F++ QYL++ ERAE
Sbjct: 129 SSPVNNEPDKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAEL 188
Query: 75 SSSLHLTETQVKIWFQNRRAKAKRLQEA 102
++SL LT+TQVKIWFQNRR+K K++ ++
Sbjct: 189 AASLGLTQTQVKIWFQNRRSKFKKMWKS 216
>sp|O57601|HMX3_CHICK Homeobox protein HMX3 OS=Gallus gallus GN=HMX3 PE=2 SV=1
Length = 308
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 11 EILILSSPLLSDSNKGDPPKLNVNLRKHKPNRKP------RTPFTTQQLLSLEKKFREKQ 64
EI++ S S+ K + + R+ P +KP RT F+ Q+ LE F K+
Sbjct: 147 EIVLEESD--SEEGKKEGGAEDWKKREESPEKKPCRKKKTRTVFSRSQVFQLESTFDMKR 204
Query: 65 YLSIAERAEFSSSLHLTETQVKIWFQNRRAKAKRLQEAEIEKIKMSAIAAAR 116
YLS +ERA ++SLHLTETQVKIWFQNRR K KR AE+E +S AA R
Sbjct: 205 YLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAAELEAANLSHAAAQR 256
>sp|Q504H8|HMX3_DANRE Homeobox protein HMX3 OS=Danio rerio GN=hmx3 PE=2 SV=1
Length = 297
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 51/75 (68%)
Query: 42 RKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLHLTETQVKIWFQNRRAKAKRLQE 101
+K RT F+ Q+ LE F K+YLS +ERA ++SLHLTETQVKIWFQNRR K KR
Sbjct: 171 KKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLA 230
Query: 102 AEIEKIKMSAIAAAR 116
AE+E +S AA R
Sbjct: 231 AELEAANLSHAAAQR 245
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,033,148
Number of Sequences: 539616
Number of extensions: 3537108
Number of successful extensions: 18993
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 332
Number of HSP's that attempted gapping in prelim test: 16413
Number of HSP's gapped (non-prelim): 2698
length of query: 192
length of database: 191,569,459
effective HSP length: 111
effective length of query: 81
effective length of database: 131,672,083
effective search space: 10665438723
effective search space used: 10665438723
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)