RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3430
(121 letters)
>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast
(Candida tropicalis) [TaxId: 5482]}
Length = 189
Score = 52.3 bits (124), Expect = 5e-10
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 65 TLEEASTIPVVYATAYYSLIVRGKMRPGESLLVH-AGAGGLGQAAISIALHMGCTVY 120
T+ + +TI V TAY L K+ PG+ + G +G+ A I +
Sbjct: 2 TINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSI 58
>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 51.6 bits (122), Expect = 9e-10
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 65 TLEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
+ E+A+ + T YY L +++P E L HA AGG+G A A +G +
Sbjct: 2 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLI 57
>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide
synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 183
Score = 51.2 bits (121), Expect = 1e-09
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 67 EEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
EA+T V Y TA++SL G++ PGE +L+H+ GG+G AA+SIA +G +Y
Sbjct: 1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIY 54
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus
caballus) [TaxId: 9796]}
Length = 176
Score = 46.9 bits (110), Expect = 4e-08
Identities = 10/56 (17%), Positives = 18/56 (32%)
Query: 66 LEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVYT 121
LE+ I ++T Y S + K+ G + V G + +
Sbjct: 3 LEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIG 58
>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4
12-hydroxydehydrogenase/prostaglandin 15-keto reductase
{Guinea pig (Cavia porcellus) [TaxId: 10141]}
Length = 182
Score = 46.2 bits (108), Expect = 7e-08
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 69 ASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
TI + TAY+ L+ ++ GE++LV A AG +G IA GC V
Sbjct: 7 LGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVV 58
>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP
{Bacillus subtilis [TaxId: 1423]}
Length = 162
Score = 45.6 bits (107), Expect = 1e-07
Identities = 7/54 (12%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Query: 51 LADPSFLWEVPAKWTLEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGL 104
+L +P +L+EA ++ + + +L + G +
Sbjct: 106 SVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVS-LEETPGALKDILQNRIQGRV 158
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo
sapiens), different isozymes [TaxId: 9606]}
Length = 176
Score = 45.3 bits (106), Expect = 2e-07
Identities = 8/56 (14%), Positives = 18/56 (32%)
Query: 66 LEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVYT 121
L++ + +T Y + + K+ PG V G + + +
Sbjct: 3 LDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIG 58
>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol
dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}
Length = 187
Score = 45.0 bits (105), Expect = 2e-07
Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 68 EASTIPVVYATAYYSLIVRGKMRPG--ESLLVHAGAGGLGQAAISIALHMGCTVY 120
I + T+ + +G + G ++++V AG G A I +GC+
Sbjct: 5 FLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRV 59
>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus
thermophilus [TaxId: 274]}
Length = 131
Score = 43.7 bits (102), Expect = 4e-07
Identities = 12/61 (19%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Query: 37 VMGLVAARSLATTVLADPSFLWEVPAKWTLEEASTIPVVYATAYYSLIVRGKMRPGESLL 96
LV LA V L +P + A+ +L+ RG G+ ++
Sbjct: 72 YAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRGH--TGKVVV 129
Query: 97 V 97
Sbjct: 130 R 130
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas
putida [TaxId: 303]}
Length = 195
Score = 44.1 bits (103), Expect = 5e-07
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 66 LEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGC 117
+ + + + + T Y+ V + PG ++ V GAG +G AA + A +G
Sbjct: 1 IRDLTCLSDILPTGYHGA-VTAGVGPGSTVYVA-GAGPVGLAAAASARLLGA 50
>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase
{Yeast (Candida tropicalis) [TaxId: 5482]}
Length = 175
Score = 43.6 bits (101), Expect = 6e-07
Identities = 7/54 (12%), Positives = 13/54 (24%), Gaps = 2/54 (3%)
Query: 58 WEVPAKWTLEEASTIPVVYATAYYSLIV-RGKMRPGESLLVHAGA-GGLGQAAI 109
+ + + T S+ +P L A G+ I
Sbjct: 120 DFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLI 173
>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod
(Gadus callarias) [TaxId: 8053]}
Length = 199
Score = 43.7 bits (102), Expect = 8e-07
Identities = 6/63 (9%), Positives = 25/63 (39%)
Query: 35 RRVMGLVAARSLATTVLADPSFLWEVPAKWTLEEASTIPVVYATAYYSLIVRGKMRPGES 94
R+V+ + + + + + + ++ L+E T + + ++ + + +
Sbjct: 136 RKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRT 195
Query: 95 LLV 97
+L
Sbjct: 196 VLS 198
>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 176
Score = 42.9 bits (100), Expect = 1e-06
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 65 TLEEASTIPVVYATAYYS---LIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVYT 121
TL+EA I TA S L G +LV GG+G A+S+ G TV
Sbjct: 2 TLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEA 61
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus
musculus), class II [TaxId: 10090]}
Length = 174
Score = 43.0 bits (100), Expect = 1e-06
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 66 LEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVYT 121
LE I +++ Y + I K+ PG + V G G +G +AI G +
Sbjct: 3 LERVCLIGCGFSSGYGAAINTAKVTPGSTCAVF-GLGCVGLSAIIGCKIAGASRII 57
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 174
Score = 42.7 bits (99), Expect = 1e-06
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 65 TLEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
++ + I + Y TAY +LI ++ GES+LVH +GG+G AA IA G +
Sbjct: 2 DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKIL 57
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo
sapiens), different isozymes [TaxId: 9606]}
Length = 176
Score = 42.2 bits (98), Expect = 2e-06
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 66 LEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
E+ I ++T Y + + GK++PG + +V G GG+G + I G +
Sbjct: 4 PEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVF-GLGGVGLSVIMGCKSAGASRI 57
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga
maritima [TaxId: 2336]}
Length = 182
Score = 41.8 bits (97), Expect = 3e-06
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 66 LEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
L+ + ATAY++ + G+++++ GAG LG + IA +G
Sbjct: 3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQ-GAGPLGLFGVVIARSLGAENV 56
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana
perezi) [TaxId: 8403]}
Length = 174
Score = 41.4 bits (96), Expect = 4e-06
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 68 EASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVYT 121
E+ I +AT Y + + K+ PG + V G GG+G +AI G +
Sbjct: 4 ESCLIGCGFATGYGAAVNTAKVTPGSTCAVF-GLGGVGFSAIVGCKAAGASRII 56
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus
callarias) [TaxId: 8053]}
Length = 175
Score = 41.2 bits (95), Expect = 4e-06
Identities = 7/56 (12%), Positives = 17/56 (30%)
Query: 66 LEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVYT 121
L+ + +T + + + K+ PG + V A + +
Sbjct: 3 LDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIA 58
>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus
thermophilus [TaxId: 274]}
Length = 171
Score = 41.2 bits (95), Expect = 6e-06
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 65 TLEEASTIPVVYATAYYSLIVRGKMRPGESLLVH 98
+ EEA+ PV + TAY +L R + RPGE +LV
Sbjct: 2 SPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQ 34
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol
dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}
Length = 174
Score = 40.3 bits (93), Expect = 1e-05
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 66 LEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
LE A I + T ++ + G S++V G G +G I+ A G
Sbjct: 3 LENAVMITDMMTTGFHGA-ELADIEMGSSVVVI-GIGAVGLMGIAGAKLRGAGRI 55
>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 201
Score = 40.3 bits (93), Expect = 1e-05
Identities = 13/69 (18%), Positives = 17/69 (24%), Gaps = 6/69 (8%)
Query: 48 TTVLADPSFLWEVPAKWTLEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQA 107
V L ++P + E I V SL GE AG +
Sbjct: 138 VLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYGE-----FDAGVPKKF 191
Query: 108 AISIALHMG 116
I
Sbjct: 192 VIDPHKTFS 200
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase
{Acinetobacter calcoaceticus [TaxId: 471]}
Length = 174
Score = 39.9 bits (92), Expect = 1e-05
Identities = 11/57 (19%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Query: 66 LEEASTIPVVYATAYYSLIVRGKMRPGESLLVH-AGAGGLGQAAISIALHMGCTVYT 121
+E + T + I K+ P S + AGA GL + +
Sbjct: 3 IELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAV 59
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 168
Score = 39.3 bits (90), Expect = 3e-05
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 65 TLEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
+ EEA+ I T Y +L +PGE + ++ G G A+ A MG V
Sbjct: 2 SFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGL-GHVAVQYAKAMGLNVV 55
>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus
subtilis [TaxId: 1423]}
Length = 167
Score = 38.0 bits (87), Expect = 7e-05
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 77 ATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVYT 121
A + + L G S+LV GG+G A+S+ G V
Sbjct: 9 ALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVA 53
>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol
dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 185
Score = 38.0 bits (87), Expect = 8e-05
Identities = 6/57 (10%), Positives = 16/57 (28%), Gaps = 3/57 (5%)
Query: 47 ATTVLADPSFLWEVPAKWTLEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGG 103
+ +F +++P P+ A + K G +++
Sbjct: 129 CRFYKHNAAFCYKLPDNVKPLVTHRFPLEKALEAFE---TFKKGLGLKIMLKCDPSD 182
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 166
Score = 37.7 bits (86), Expect = 8e-05
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 66 LEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
E + I T Y L + RPG+ + + G GGLG A+ A MG V
Sbjct: 3 FAEIAPILCAGVTVYKGL-KQTNARPGQWVAIS-GIGGLGHVAVQYARAMGLHVA 55
>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol
dehydrogenase, ADH6 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 192
Score = 37.5 bits (86), Expect = 1e-04
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 50 VLADPSFLWEVPAKWTLEEASTIPVVYATAYYSLIVRGKMRPGESLLV 97
V F+ +P +E A + + +G +R +L+
Sbjct: 139 VRVHEHFVVPIPENIWVETLPVGEAGVHEA-FERMEKGDVRYRFTLVG 185
>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human
(Homo sapiens), different isozymes [TaxId: 9606]}
Length = 197
Score = 37.5 bits (86), Expect = 1e-04
Identities = 2/53 (3%), Positives = 18/53 (33%)
Query: 45 SLATTVLADPSFLWEVPAKWTLEEASTIPVVYATAYYSLIVRGKMRPGESLLV 97
+ + + + ++ ++E T + + + + + +++
Sbjct: 144 TFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVK 196
>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 152
Score = 36.4 bits (83), Expect = 3e-04
Identities = 9/53 (16%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 45 SLATTVLADPSFLWEVPAKWTLEEASTIPVVYATAYYSLIVRGKMRPGESLLV 97
+ +L +P A I + I+RG++R G +++
Sbjct: 100 GYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVR 150
>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon
Aeropyrum pernix [TaxId: 56636]}
Length = 172
Score = 36.1 bits (82), Expect = 4e-04
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 62 AKWTLEEASTIPVVYATAYYSLIVRGKM-RPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
++ L E + + TAY ++ + PG + + G GGLG A+ + M
Sbjct: 2 SREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIV-GVGGLGHIAVQLLKVMTPATV 60
>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase
{Escherichia coli [TaxId: 562]}
Length = 147
Score = 35.8 bits (81), Expect = 4e-04
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 45 SLATTVLADPSFLWEVPAKWTLEEASTIPVVYATAYYSLIVRGKMRPGESLLV 97
S ++AD + + K + E P+ A + + + + G SLL+
Sbjct: 95 SSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEI-LESRATQGSSLLI 146
>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon
Sulfolobus solfataricus [TaxId: 2287]}
Length = 170
Score = 35.9 bits (81), Expect = 5e-04
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 65 TLEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
EA+ + T Y ++ + + P ++LLV GGLG A+ IA +
Sbjct: 2 NAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATI 56
>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol
dehydrogenase) {Silverleaf whitefly (Bemisia
argentifolii) [TaxId: 77855]}
Length = 178
Score = 35.7 bits (81), Expect = 5e-04
Identities = 3/43 (6%), Positives = 13/43 (30%), Gaps = 1/43 (2%)
Query: 58 WEVPAKWTLEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAG 100
++P +++ T + + + ++ V
Sbjct: 134 HKLPDNCNVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS 175
>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia
coli [TaxId: 562]}
Length = 77
Score = 34.2 bits (78), Expect = 6e-04
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 65 TLEEASTIPVVYATAYYSLI---VRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVYT 121
+A I TA ++ G ++V +GG+G A+++ +G V
Sbjct: 2 DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61
>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 150
Score = 34.3 bits (77), Expect = 0.001
Identities = 8/45 (17%), Positives = 18/45 (40%)
Query: 53 DPSFLWEVPAKWTLEEASTIPVVYATAYYSLIVRGKMRPGESLLV 97
++++P K S P+ + I+ G G+ +L+
Sbjct: 105 ADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILL 149
>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase
{Acinetobacter calcoaceticus [TaxId: 471]}
Length = 194
Score = 34.5 bits (78), Expect = 0.001
Identities = 14/99 (14%), Positives = 26/99 (26%), Gaps = 6/99 (6%)
Query: 21 CVLGLEFSGRDTKGRRVMGLVAARSLATTVLADPSFLWEVPAKWTLEEASTIPVVYATAY 80
C G + GR G + + A A+ + +
Sbjct: 97 CNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSR------E 150
Query: 81 YSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTV 119
+ + K P + L+ + QAAI +
Sbjct: 151 NNTVKVTKDFPFDQLVKFYAFDEINQAAIDSRKGITLKP 189
>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase
{Archaeon Aeropyrum pernix [TaxId: 56636]}
Length = 171
Score = 34.3 bits (77), Expect = 0.002
Identities = 10/78 (12%), Positives = 23/78 (29%), Gaps = 2/78 (2%)
Query: 20 DCVLGLEFSGRDTKGRRVMGLVAARSLATTVLADPSFLWEVPAKWTLEEASTIPVVYATA 79
C+ + GL A + + ++P +E
Sbjct: 95 TCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDV 154
Query: 80 YYSLIVRGKMRPGESLLV 97
L +G++ G ++L+
Sbjct: 155 LERL-EKGEV-LGRAVLI 170
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 168
Score = 33.8 bits (76), Expect = 0.002
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 66 LEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVYT 121
A+ + T Y L VR PG+ + + G GG+G I+ MG Y
Sbjct: 3 SHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIV-GLGGIGSMGTLISKAMGAETYV 56
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol
dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 171
Score = 33.3 bits (75), Expect = 0.003
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 65 TLEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
T EE + I + ++ RG + G +LV GAG +G + +A MG
Sbjct: 2 TFEEGALIEP-LSVGIHA-CRRGGVTLGHKVLVC-GAGPIGMVTLLVAKAMGAAQV 54
>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia
coli [TaxId: 562]}
Length = 177
Score = 32.5 bits (73), Expect = 0.007
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 65 TLEEASTIPVVYATAYYS---LIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVYT 121
+A I TA L G ++V +GG+G A+++ +G V
Sbjct: 2 DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61
>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436
{Thermotoga maritima [TaxId: 2336]}
Length = 184
Score = 31.0 bits (69), Expect = 0.022
Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 8/56 (14%)
Query: 45 SLATTVLADP-SFLWEVPAKWTLEEASTIPVVYATAYYSLIVRGKMRPGESLLVHA 99
++ ++ DP + + +V K T A +L + R ++++
Sbjct: 135 CYSSHIVLDPETDVLKVSEKITHRLP------LKEANKAL-ELMESREALKVILYP 183
>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 175
Score = 30.3 bits (67), Expect = 0.042
Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 2/48 (4%)
Query: 50 VLADPSFLWEVPAKWTLEEASTIPVVYATAYYSLIVRGKMRPGESLLV 97
VLADP+++ +P + R G +L
Sbjct: 129 VLADPNYVGILPKNVKATIHPGKLDDINQILDQM--RAGQIEGRIVLE 174
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol
dehydrogenase) {Silverleaf whitefly (Bemisia
argentifolii) [TaxId: 77855]}
Length = 170
Score = 29.9 bits (66), Expect = 0.045
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 65 TLEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
+LEE + + + + ++ R ++ G ++LV GAG +G ++ A G V
Sbjct: 2 SLEEGALLEPL-SVGVHAC-RRAGVQLGTTVLVI-GAGPIGLVSVLAAKAYGAFVV 54
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia
coli [TaxId: 562]}
Length = 168
Score = 29.2 bits (64), Expect = 0.096
Identities = 8/52 (15%), Positives = 13/52 (25%), Gaps = 1/52 (1%)
Query: 66 LEEASTIPVVYATAYYSLIVRGKMRPGESLLVHAGAGGLGQAAISIALHMGC 117
L + + T Y L + PG+ + V G
Sbjct: 6 LAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAH 56
>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH
{Escherichia coli [TaxId: 562]}
Length = 146
Score = 28.3 bits (62), Expect = 0.15
Identities = 6/39 (15%), Positives = 9/39 (23%)
Query: 45 SLATTVLADPSFLWEVPAKWTLEEASTIPVVYATAYYSL 83
LA +L +P +E S
Sbjct: 97 GLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN 135
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide
transhydrogenase dI component {Rhodospirillum rubrum
[TaxId: 1085]}
Length = 183
Score = 25.3 bits (55), Expect = 1.8
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 87 GKMRPGESLLVHAGAGGLGQAAISIALHMGCTVY 120
G + P ++ G G G AI+ A +G V
Sbjct: 25 GTVPPAR--VLVFGVGVAGLQAIATAKRLGAVVM 56
>d2btva_ e.28.1.1 (A:) BTV vp3 {Bluetongue virus, strain 1 [TaxId:
40051]}
Length = 845
Score = 25.2 bits (55), Expect = 2.9
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 46 LATTVLADPSFLWEVP 61
LA + +P +W+VP
Sbjct: 211 LALQLPVNPQVVWDVP 226
>d1st6a4 a.24.9.1 (A:372-488) Vinculin {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 117
Score = 23.5 bits (51), Expect = 5.6
Identities = 5/25 (20%), Positives = 10/25 (40%)
Query: 85 VRGKMRPGESLLVHAGAGGLGQAAI 109
+ K+ ++ L G G+ I
Sbjct: 13 IAKKIDAAQNWLADPNGGSEGEEHI 37
>d1hhsa_ e.8.1.6 (A:) dsRNA phage RNA-dependent RNA-polymerase
{Bacteriophage PHI-6 [TaxId: 10879]}
Length = 664
Score = 23.8 bits (51), Expect = 7.0
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Query: 24 GLEFSGRDTKGRRVMGLVAARSLATTVLADPSFLWEVPAKWTLEE 68
LE S R GL + VLADP+ L KWT +
Sbjct: 595 TLELSRYVASMARQAGLAELTPIDLEVLADPNKLQY---KWTEAD 636
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.410
Gapped
Lambda K H
0.267 0.0522 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 437,036
Number of extensions: 17211
Number of successful extensions: 128
Number of sequences better than 10.0: 1
Number of HSP's gapped: 112
Number of HSP's successfully gapped: 54
Length of query: 121
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 46
Effective length of database: 1,377,846
Effective search space: 63380916
Effective search space used: 63380916
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.4 bits)