BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3431
(549 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a
(Hsp70-1) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 409
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 28 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 87
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
TVFDAKRLIGRKF DP +Q DMKHWPF V+ND KPK+QV +KGE K F PEEISSMVLT
Sbjct: 88 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 147
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 148 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 207
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
D+ KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H EE
Sbjct: 208 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 266
Query: 243 FKRKCR 248
FKRK +
Sbjct: 267 FKRKHK 272
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 24/40 (60%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
VQ LLQ+FF G+ LN SINPDE IL GD+S
Sbjct: 368 VQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKS 407
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
Complex With Amp-Pnp
Length = 391
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 9 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 68
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
TVFDAKRLIGRKF DP +Q DMKHWPF V+ND KPK+QV +KGE K F PEEISSMVLT
Sbjct: 69 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 128
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 129 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 188
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
D+ KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H EE
Sbjct: 189 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 247
Query: 243 FKRKCR 248
FKRK +
Sbjct: 248 FKRKHK 253
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAI 306
VQ LLQ+FF G+ LN SINPDE IL GD+S +
Sbjct: 349 VQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENV 391
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The
Apo Form
Length = 391
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 9 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 68
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
TVFDAKRLIGRKF DP +Q DMKHWPF V+ND KPK+QV +KGE K F PEEISSMVLT
Sbjct: 69 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 128
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 129 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 188
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
D+ KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H EE
Sbjct: 189 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 247
Query: 243 FKRKCR 248
FKRK +
Sbjct: 248 FKRKHK 253
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAI 306
VQ LLQ+FF G+ LN SINPDE IL GD+S +
Sbjct: 349 VQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENV 391
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3A8Y|B Chain B, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3ATU|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp- And Mg
Ion-Bound State
pdb|3ATV|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-Bound And
Mg Ion-Free State
pdb|3AY9|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-, Mg Ion-,
And K Ion- Bound State
Length = 392
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 10 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 69
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
TVFDAKRLIGRKF DP +Q DMKHWPF V+ND KPK+QV +KGE K F PEEISSMVLT
Sbjct: 70 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 129
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 130 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 189
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
D+ KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H EE
Sbjct: 190 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 248
Query: 243 FKRKCR 248
FKRK +
Sbjct: 249 FKRKHK 254
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAI 306
VQ LLQ+FF G+ LN SINPDE IL GD+S +
Sbjct: 350 VQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENV 392
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 382
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 65
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
TVFDAKRLIGRKF DP +Q DMKHWPF V+ND KPK+QV +KGE K F PEEISSMVLT
Sbjct: 66 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 125
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 126 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 185
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
D+ KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H EE
Sbjct: 186 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 244
Query: 243 FKRKCR 248
FKRK +
Sbjct: 245 FKRKHK 250
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 21/37 (56%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSG 300
VQ LLQ+FF G+ LN SINPDE IL G
Sbjct: 346 VQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG 382
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1
Length = 380
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 4 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 63
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
TVFDAKRLIGRKF DP +Q DMKHWPF V+ND KPK+QV +KGE K F PEEISSMVLT
Sbjct: 64 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 123
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 124 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 183
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
D+ KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H EE
Sbjct: 184 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 242
Query: 243 FKRKCR 248
FKRK +
Sbjct: 243 FKRKHK 248
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 21/37 (56%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSG 300
VQ LLQ+FF G+ LN SINPDE IL G
Sbjct: 344 VQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG 380
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain
Length = 382
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
AIGIDLGTTYSC+ VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 6 AIGIDLGTTYSCIGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 65
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
TVFDAKRLIGRKF DP +Q DMKHWPF V+ND KPK+QV +KGE K F PEEISSMVLT
Sbjct: 66 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLT 125
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
KMKE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 126 KMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 185
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
D+ KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H EE
Sbjct: 186 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 244
Query: 243 FKRKCR 248
FKRK +
Sbjct: 245 FKRKHK 250
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 21/37 (56%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSG 300
VQ LLQ+FF G+ LN SINPDE IL G
Sbjct: 346 VQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG 382
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 554
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 144/209 (68%), Positives = 175/209 (83%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAIQDVLLVDVTPLSLGIET 323
+Q LLQ+FF GK LN SINPDE ILSGD+S +QD+LL+DVTPLSLGIET
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIET 405
Query: 324 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIP 383
AGGVMT LI+RNT IP KQTQTFTTY+DNQP V IQV+EGERAMTKDNNLLG F+LTGIP
Sbjct: 406 AGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIP 465
Query: 384 PAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERY 443
PAPRGVP+I+VTFD+DANGILNV+A D S+GK ITI NDKGRLSKE+I+RM+ +AE+Y
Sbjct: 466 PAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKY 525
Query: 444 KDEDEKQKERISARNNLEAYVFNVKQALD 472
K EDEKQ++++S++N+LE+Y FN+K ++
Sbjct: 526 KAEDEKQRDKVSSKNSLESYAFNMKATVE 554
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2
(Hsp70-2) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 404
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/256 (81%), Positives = 228/256 (89%), Gaps = 5/256 (1%)
Query: 1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 60
MPAIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 23 MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 82
Query: 61 RNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMV 120
NT+FDAKRLIGRKF+D +Q DMKHWPF VV++ KPK+QVE+KGE KTF PEEISSMV
Sbjct: 83 TNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMV 142
Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
LTKMKE AEAYLG V AVITVPAYFND+QRQATKDAG I GLNV+RI+NEPTAAA+AY
Sbjct: 143 LTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAY 202
Query: 181 GLDKN--LKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
GLDK GE+NVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+VSH
Sbjct: 203 GLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVSH 261
Query: 239 LAEEFKRKCRSASDVG 254
LAEEFKRK + D+G
Sbjct: 262 LAEEFKRKHK--KDIG 275
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 22/38 (57%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGD 301
+Q LLQ+FF GK LN SINPDE IL GD
Sbjct: 367 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGD 404
>pdb|2QW9|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QWL|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWL|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWM|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
pdb|2QWM|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
Length = 394
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAIQDVLLV 312
+Q LLQ+FF GK LN SINPDE ILSGD+S +QD+LL+
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
>pdb|3CQX|A Chain A, Chaperone Complex
pdb|3CQX|B Chain B, Chaperone Complex
Length = 386
Score = 430 bits (1106), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 10 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 69
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 70 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 129
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 130 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 189
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 190 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 248
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 249 EFKRKHK 255
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILS 299
+Q LLQ+FF GK LN SINPDE ILS
Sbjct: 351 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 386
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular
Chaperone Hsc70. Ii. Potassium Binds Specifically In The
Atpase Active Site
pdb|1NGI|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|1NGJ|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|3HSC|A Chain A, Three-Dimensional Structure Of The Atpase Fragment Of A
70k Heat-Shock Cognate Protein
Length = 386
Score = 430 bits (1106), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The
Hsc70 Atpase Domain
Length = 400
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 24 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 83
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 84 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 143
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 144 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 203
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 204 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 262
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 263 EFKRKHK 269
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILS 299
+Q LLQ+FF GK LN SINPDE ILS
Sbjct: 365 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 400
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP
pdb|3FZH|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZK|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZL|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZM|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3LDQ|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH SMALL
MOLECULE Inhibitor
pdb|3M3Z|A Chain A, Crystal Structure Of Hsc70/bag1 In Complex With Small
Molecule Inhibitor
Length = 381
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILS 299
+Q LLQ+FF GK LN SINPDE ILS
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A
MUTANT
Length = 554
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/247 (80%), Positives = 222/247 (89%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIAAG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 144/209 (68%), Positives = 175/209 (83%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAIQDVLLVDVTPLSLGIET 323
+Q LLQ+FF GK LN SINPDE ILSGD+S +QD+LL+DVTPLSLGIET
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIET 405
Query: 324 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIP 383
AGGVMT LI+RNT IP KQTQTFTTY+DNQP V IQV+EGERAMTKDNNLLG F+LTGIP
Sbjct: 406 AGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIP 465
Query: 384 PAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERY 443
PAPRGVP+I+VTFD+DANGILNV+A D S+GK ITI NDKGRLSKE+I+RM+ +AE+Y
Sbjct: 466 PAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKY 525
Query: 444 KDEDEKQKERISARNNLEAYVFNVKQALD 472
K EDEKQ++++S++N+LE+Y FN+K ++
Sbjct: 526 KAEDEKQRDKVSSKNSLESYAFNMKATVE 554
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+N+PTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINQPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 386
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLG+TYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGSTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant
Length = 381
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDA+RLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAERLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILS 299
+Q LLQ+FF GK LN SINPDE ILS
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
pdb|2V7Z|B Chain B, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
Length = 543
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 198/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQA KDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQAAKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK ++ ERNVLIFDLGGGTFDVSIL+ ++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVRAERNVLIFDLGGGTFDVSILTTEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 140/198 (70%), Positives = 167/198 (84%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAIQDVLLVDVTPLSLGIET 323
+Q LLQ+FF GK LN SINPDE ILSGD+S +QD+LL+DVTPLSLGIET
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIET 405
Query: 324 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIP 383
AGGVMT LI+RNT IP KQTQTFTTY+DNQP V IQV+EGERAMTKDNNLLG F+LTGIP
Sbjct: 406 AGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIP 465
Query: 384 PAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERY 443
PAPRGVP+I+VTFD+DANGILNV+A D S+GK ITI NDKGRLSKE+I+RM+ +AE+Y
Sbjct: 466 PAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKY 525
Query: 444 KDEDEKQKERISARNNLE 461
K EDEKQ++++S++N+LE
Sbjct: 526 KAEDEKQRDKVSSKNSLE 543
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGG FDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGVFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTF+VSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFNVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIF+LGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFNLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GI+LGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGINLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+N PTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINSPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant
Length = 381
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDA RLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAARLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILS 299
+Q LLQ+FF GK LN SINPDE ILS
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GI LGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGISLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTF VSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFSVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIF LGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFSLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant
Length = 381
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDA RLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAMRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILS 299
+Q LLQ+FF GK LN SINPDE ILS
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGG FDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGEFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70
Length = 381
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLG TYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGGTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILS 299
+Q LLQ+FF GK LN SINPDE ILS
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
1nge 3
Length = 386
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTF VSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFKVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 427 bits (1098), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 2 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 61
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 62 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 121
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+N PTAAA+AYG
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINSPTAAAIAYG 181
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 182 LDKAVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 240
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 241 EFKRKHK 247
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILS 299
+Q LLQ+FF GK LN SINPDE ILS
Sbjct: 343 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 378
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
pdb|2QWO|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 394
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+ I+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLCIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAIQDVLLV 312
+Q LLQ+FF GK LN SINPDE ILSGD+S +QD+LL+
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1-Like Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 408
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/246 (82%), Positives = 224/246 (91%), Gaps = 1/246 (0%)
Query: 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 30 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQN 89
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
TVFDAKRLIGRKF+DP +Q DMK WPF V+N+ KPK+ V +KGE K F PEEISSMVLT
Sbjct: 90 TVFDAKRLIGRKFNDPVVQADMKLWPFQVINEGGKPKVLVSYKGENKAFYPEEISSMVLT 149
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
K+KETAEA+LGH V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 150 KLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 209
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
DK +GER+VLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLVSH EE
Sbjct: 210 DKGGQGERHVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVSHFVEE 268
Query: 243 FKRKCR 248
FKRK +
Sbjct: 269 FKRKHK 274
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQ 302
VQ LLQ++F G+ LN SINPDE IL GD+
Sbjct: 370 VQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDK 408
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
Mutant With Cys 17 Replaced By Lys
Length = 386
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 223/247 (90%), Gaps = 1/247 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYS V VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 PAVGIDLGTTYSKVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 64
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVL 124
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 125 TKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 185 LDKKVGAERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 242 EFKRKCR 248
EFKRK +
Sbjct: 244 EFKRKHK 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQS 303
+Q LLQ+FF GK LN SINPDE ILSGD+S
Sbjct: 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 198/244 (81%), Positives = 220/244 (90%), Gaps = 1/244 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 2 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 61
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR+FDD +Q DMKHWPF VVND PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 62 NTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVSSMVL 121
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 181
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIF LGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 182 LDKAVGAERNVLIFSLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 240
Query: 242 EFKR 245
EFKR
Sbjct: 241 EFKR 244
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILS 299
+Q LLQ+FF GK LN SINPDE ILS
Sbjct: 343 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 378
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 198/244 (81%), Positives = 219/244 (89%), Gaps = 1/244 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PA+GIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 2 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 61
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NTVFDAKRLIGR FDD +Q DMKHWPF VVND PK+QVE+KGE K+F PEE+SSMVL
Sbjct: 62 NTVFDAKRLIGRAFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVSSMVL 121
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYG
Sbjct: 122 TKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 181
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK + ERNVLIFDLGGGTF VSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H
Sbjct: 182 LDKAVGAERNVLIFDLGGGTFSVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 240
Query: 242 EFKR 245
EFKR
Sbjct: 241 EFKR 244
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILS 299
+Q LLQ+FF GK LN SINPDE ILS
Sbjct: 343 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 378
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 382
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/246 (81%), Positives = 221/246 (89%), Gaps = 1/246 (0%)
Query: 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
AIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 65
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
TVFDAKRLIGRKF DP +Q D KHWPF V+ND KPK+QV +KGE K F PEEISS VLT
Sbjct: 66 TVFDAKRLIGRKFGDPVVQSDXKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSXVLT 125
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
K KE AEAYLG+ V +AVITVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 126 KXKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 185
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
D+ KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H EE
Sbjct: 186 DRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEE 244
Query: 243 FKRKCR 248
FKRK +
Sbjct: 245 FKRKHK 250
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 21/37 (56%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSG 300
VQ LLQ+FF G+ LN SINPDE IL G
Sbjct: 346 VQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILXG 382
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|B Chain B, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 403
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 195/244 (79%), Positives = 221/244 (90%), Gaps = 1/244 (0%)
Query: 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
A+GIDLGTTYSCV VFQQG+VEI+ANDQGNRTTPSYVAFTDTERL+GDAAK+Q A+NP N
Sbjct: 26 AVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPHN 85
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
TVFDAKRLIGRKF D +Q DMKHWPF VV++ KPK++V ++GE KTF PEEISSMVL+
Sbjct: 86 TVFDAKRLIGRKFADTTVQSDMKHWPFRVVSEGGKPKVRVCYRGEDKTFYPEEISSMVLS 145
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
KMKETAEAYLG V+ AVITVPAYFND+QRQATKDAGAIAGLNV+RI+NEPTAAA+AYGL
Sbjct: 146 KMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 205
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242
D+ GERNVLIFDLGGGTFDVS+LSID G +FEV++TAGDTHLGGEDFDNRLV+H EE
Sbjct: 206 DRRGAGERNVLIFDLGGGTFDVSVLSIDAG-VFEVKATAGDTHLGGEDFDNRLVNHFMEE 264
Query: 243 FKRK 246
F+RK
Sbjct: 265 FRRK 268
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 22/38 (57%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGD 301
VQ LLQ+FF GK LN SINPDE +L GD
Sbjct: 366 VQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAVLMGD 403
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2)
From Homo Sapiens At 1.80 A Resolution
Length = 387
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/255 (79%), Positives = 222/255 (87%), Gaps = 5/255 (1%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PAIGIDLGTTYSCV VFQ GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA NP
Sbjct: 6 PAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAXNPT 65
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
NT+FDAKRLIGRKF+D +Q D KHWPF VV++ KPK+QVE+KGE KTF PEEISS VL
Sbjct: 66 NTIFDAKRLIGRKFEDATVQSDXKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSXVL 125
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TK KE AEAYLG V AVITVPAYFND+QRQATKDAG I GLNV+RI+NEPTAAA+AYG
Sbjct: 126 TKXKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYG 185
Query: 182 LDKN--LKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL 239
LDK GE+NVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR VSHL
Sbjct: 186 LDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRXVSHL 244
Query: 240 AEEFKRKCRSASDVG 254
AEEFKRK + D+G
Sbjct: 245 AEEFKRKHK--KDIG 257
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQ 302
+Q LLQ+FF GK LN SINPDE IL GD+
Sbjct: 349 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDK 387
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3KVG|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3L4I|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L4I|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L6Q|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
pdb|3L6Q|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
Length = 400
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/248 (74%), Positives = 212/248 (85%), Gaps = 2/248 (0%)
Query: 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPR 61
PAIGIDLGTTYSCV V++ V+I+ NDQGNRTTPSYVAFT+TERLIGDAAKNQVA NP
Sbjct: 20 PAIGIDLGTTYSCVGVWRNDTVDIVPNDQGNRTTPSYVAFTETERLIGDAAKNQVARNPE 79
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVND-RSKPKIQVEFKGERKTFAPEEISSMV 120
NTVFDAKRLIGRKFDD +Q DM HWPF VV + KP I V + GE+K F EEIS+MV
Sbjct: 80 NTVFDAKRLIGRKFDDQAVQSDMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEISAMV 139
Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
L KMKE +EAYLG +++AV+TVPAYFND+QRQATKDAGAIAGLNVMRI+NEPTAAA+AY
Sbjct: 140 LQKMKEISEAYLGRQIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAY 199
Query: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
GLDK GERNVLIFDLGGGTFDVS+L+I++G +FEV++TAGDTHLGGEDFDNRLV
Sbjct: 200 GLDKKGTGERNVLIFDLGGGTFDVSLLTIEDG-IFEVKATAGDTHLGGEDFDNRLVEFCV 258
Query: 241 EEFKRKCR 248
++FKRK R
Sbjct: 259 QDFKRKNR 266
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGD 301
VQ+L+Q FF GK +INPDE IL+G+
Sbjct: 363 VQALIQEFFNGKEPCKAINPDEAVAYGAAVQAAILNGE 400
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
pdb|3IUC|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
Length = 408
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/247 (72%), Positives = 209/247 (84%), Gaps = 4/247 (1%)
Query: 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPR 61
+GIDLGTTYSCV VF+ G+VEIIANDQGNR TPSYVAFT + ERLIGDAAKNQ+ NP
Sbjct: 28 VVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPE 87
Query: 62 NTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKG-ERKTFAPEEISSMV 120
NTVFDAKRLIGR ++DP +QQD+K PF VV ++KP IQV+ G + KTFAPEEIS+MV
Sbjct: 88 NTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISAMV 147
Query: 121 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 180
LTKMKETAEAYLG V AV+TVPAYFNDAQRQATKDAG IAGLNVMRI+NEPTAAA+AY
Sbjct: 148 LTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAY 207
Query: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
GLDK +GE+N+L+FDLGGGTFDVS+L+ID G +FEV +T GDTHLGGEDFD R++ H
Sbjct: 208 GLDKR-EGEKNILVFDLGGGTFDVSLLTIDNG-VFEVVATNGDTHLGGEDFDQRVMEHFI 265
Query: 241 EEFKRKC 247
+ +K+K
Sbjct: 266 KLYKKKT 272
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSGDQ 302
+Q L++ FF GK + INPDE +LSGDQ
Sbjct: 369 IQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQ 407
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDL|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDN|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDN|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDO|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDO|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDP|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
pdb|3LDP|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
Length = 384
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/246 (72%), Positives = 209/246 (84%), Gaps = 4/246 (1%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPRN 62
+GIDLGTTYSCV VF+ G+VEIIANDQGNR TPSYVAFT + ERLIGDAAKNQ+ NP N
Sbjct: 8 VGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPEN 67
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKG-ERKTFAPEEISSMVL 121
TVFDAKRLIGR ++DP +QQD+K PF VV ++KP IQV+ G + KTFAPEEIS+MVL
Sbjct: 68 TVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISAMVL 127
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG 181
TKMKETAEAYLG V AV+TVPAYFNDAQRQATKDAG IAGLNVMRI+NEPTAAA+AYG
Sbjct: 128 TKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYG 187
Query: 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
LDK +GE+N+L+FDLGGGTFDVS+L+ID G +FEV +T GDTHLGGEDFD R++ H +
Sbjct: 188 LDKR-EGEKNILVFDLGGGTFDVSLLTIDNG-VFEVVATNGDTHLGGEDFDQRVMEHFIK 245
Query: 242 EFKRKC 247
+K+K
Sbjct: 246 LYKKKT 251
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILSG 300
+Q L++ FF GK + INPDE +LSG
Sbjct: 348 IQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSG 384
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN
pdb|3QML|A Chain A, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
pdb|3QML|B Chain B, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
Length = 390
Score = 359 bits (921), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 170/243 (69%), Positives = 203/243 (83%), Gaps = 2/243 (0%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
IGIDLGTTYSCVAV + GK EI+AN+QGNR TPSYVAFTD ERLIGDAAKNQVA NP+NT
Sbjct: 17 IGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNT 76
Query: 64 VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTK 123
+FD KRLIG K++D +Q+D+KH PF VVN KP ++V KGE+K F PEEIS M+L K
Sbjct: 77 IFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGK 136
Query: 124 MKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLD 183
MK+ AE YLG V AV+TVPAYFNDAQRQATKDAG IAGLNV+RIVNEPTAAA+AYGLD
Sbjct: 137 MKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLD 196
Query: 184 KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 243
K+ K E ++++DLGGGTFDVS+LSI+ G +FEV++T+GDTHLGGEDFD ++V L + F
Sbjct: 197 KSDK-EHQIIVYDLGGGTFDVSLLSIENG-VFEVQATSGDTHLGGEDFDYKIVRQLIKAF 254
Query: 244 KRK 246
K+K
Sbjct: 255 KKK 257
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILS 299
VQ LL+++F GK + INPDE +LS
Sbjct: 355 VQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 390
>pdb|3QFU|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXED WITH
ADP
Length = 394
Score = 359 bits (921), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 170/243 (69%), Positives = 203/243 (83%), Gaps = 2/243 (0%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
IGIDLGTTYSCVAV + GK EI+AN+QGNR TPSYVAFTD ERLIGDAAKNQVA NP+NT
Sbjct: 21 IGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNT 80
Query: 64 VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTK 123
+FD KRLIG K++D +Q+D+KH PF VVN KP ++V KGE+K F PEEIS M+L K
Sbjct: 81 IFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGK 140
Query: 124 MKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLD 183
MK+ AE YLG V AV+TVPAYFNDAQRQATKDAG IAGLNV+RIVNEPTAAA+AYGLD
Sbjct: 141 MKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLD 200
Query: 184 KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 243
K+ K E ++++DLGGGTFDVS+LSI+ G +FEV++T+GDTHLGGEDFD ++V L + F
Sbjct: 201 KSDK-EHQIIVYDLGGGTFDVSLLSIENG-VFEVQATSGDTHLGGEDFDYKIVRQLIKAF 258
Query: 244 KRK 246
K+K
Sbjct: 259 KKK 261
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 264 VQSLLQNFFCGKSLNLSINPDEXXXXXXXXXXXILS 299
VQ LL+++F GK + INPDE +LS
Sbjct: 359 VQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
pdb|3GL1|B Chain B, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
Length = 387
Score = 352 bits (902), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 170/246 (69%), Positives = 202/246 (82%), Gaps = 3/246 (1%)
Query: 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRN 62
AIGIDLGTTYSCVA ++ VEIIAN+QGNR TPS+VAFT ERLIGDAAKNQ A+NPRN
Sbjct: 12 AIGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPRN 70
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
TVFDAKRLIGR+FDD +Q+DMK WPF V++ P I+V++ E KTF+P+EIS+MVLT
Sbjct: 71 TVFDAKRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEETKTFSPQEISAMVLT 130
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
KMKE AEA +G V AVITVPAYFNDAQRQATKDAGAI+GLNV+RI+NEPTAAA+AYGL
Sbjct: 131 KMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGL 190
Query: 183 DK-NLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241
+ ER+VLIFDLGGGTFDVS+L I G ++ V+ST+G+THLGG+DFD L+ H
Sbjct: 191 GAGKSEKERHVLIFDLGGGTFDVSLLHI-AGGVYTVKSTSGNTHLGGQDFDTNLLEHFKA 249
Query: 242 EFKRKC 247
EFK+K
Sbjct: 250 EFKKKT 255
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE
(1-605) Complexed With Adp And Substrate
Length = 605
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/246 (58%), Positives = 179/246 (72%), Gaps = 8/246 (3%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPRN 62
IGIDLGTT SCVA+ ++ N +G+RTTPS +A+T D E L+G AK Q NP+N
Sbjct: 5 IGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQN 64
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
T+F KRLIGR+F D ++Q+D+ PF ++ VE KG++ AP +IS+ VL
Sbjct: 65 TLFAIKRLIGRRFQDEEVQRDVSIMPFKIIA-ADNGDAWVEVKGQK--MAPPQISAEVLK 121
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
KMK+TAE YLG V +AVITVPAYFNDAQRQATKDAG IAGL V RI+NEPTAAALAYGL
Sbjct: 122 KMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGL 181
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDE---GALFEVRSTAGDTHLGGEDFDNRLVSHL 239
DK G R + ++DLGGGTFD+SI+ IDE FEV +T GDTHLGGEDFD+RL+++L
Sbjct: 182 DKG-TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240
Query: 240 AEEFKR 245
EEFK+
Sbjct: 241 VEEFKK 246
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 173/299 (57%), Gaps = 13/299 (4%)
Query: 229 EDFDNRLVSHLAEEFKRKCRSASDVGDH---HGDAHF-VVQSLLQNFFCGKSLNLSINPD 284
ED NR + L + S SD+ D G +VQ + FF GK +NPD
Sbjct: 310 EDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPD 368
Query: 285 EXXXXXXXXXXXILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQ 344
E +L+GD ++DVLL+DVTPLSLGIET GGVMT LI +NT IP K +Q
Sbjct: 369 EAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQ 424
Query: 345 TFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGIL 404
F+T DNQ AVTI V +GER DN LG F+L GI PAPRG+P+I+VTFD+DA+GIL
Sbjct: 425 VFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGIL 484
Query: 405 NVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYV 464
+V+AKD +SGK Q ITIK G L+++EI +M+ DAE + D K E + RN + +
Sbjct: 485 HVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLL 543
Query: 465 FNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLM 523
+ ++ +++AG+KL +K+ A L DK + K+Q+L + LM
Sbjct: 544 HSTRKQVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLM 599
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe
Bound To The Atpase Domain Of The Molecular Chaperone
Dnak
Length = 383
Score = 278 bits (710), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 144/246 (58%), Positives = 179/246 (72%), Gaps = 8/246 (3%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPRN 62
IGIDLGTT SCVA+ ++ N +G+RTTPS +A+T D E L+G AK Q NP+N
Sbjct: 5 IGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQN 64
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
T+F KRLIGR+F D ++Q+D+ PF ++ VE KG++ AP +IS+ VL
Sbjct: 65 TLFAIKRLIGRRFQDEEVQRDVSIMPFKIIA-ADNGDAWVEVKGQK--MAPPQISAEVLK 121
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
KMK+TAE YLG V +AVITVPAYFNDAQRQATKDAG IAGL V RI+NEPTAAALAYGL
Sbjct: 122 KMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGL 181
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDE---GALFEVRSTAGDTHLGGEDFDNRLVSHL 239
DK G R + ++DLGGGTFD+SI+ IDE FEV +T GDTHLGGEDFD+RL+++L
Sbjct: 182 DKG-TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240
Query: 240 AEEFKR 245
EEFK+
Sbjct: 241 VEEFKK 246
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|B Chain B, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|C Chain C, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|D Chain D, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
Length = 605
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/246 (57%), Positives = 176/246 (71%), Gaps = 8/246 (3%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPRN 62
IGIDLGTT SCVA+ ++ N +G+RTTPS +A+T D L+G AK Q NP+N
Sbjct: 5 IGIDLGTTNSCVAIXDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQN 64
Query: 63 TVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLT 122
T+F KRLIGR+F D ++Q+D+ PF ++ VE KG++ AP +IS+ VL
Sbjct: 65 TLFAIKRLIGRRFQDEEVQRDVSIXPFKIIA-ADNGDAWVEVKGQKX--APPQISAEVLK 121
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
K K+TAE YLG V +AVITVPAYFNDAQRQATKDAG IAGL V RI+NEPTAAALAYGL
Sbjct: 122 KXKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGL 181
Query: 183 DKNLKGERNVLIFDLGGGTFDVSILSIDE---GALFEVRSTAGDTHLGGEDFDNRLVSHL 239
DK G R + ++DLGGG FD+SI+ IDE FEV +T GDTHLGGEDFD+RL+++L
Sbjct: 182 DKG-TGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240
Query: 240 AEEFKR 245
EEFK+
Sbjct: 241 VEEFKK 246
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 168/298 (56%), Gaps = 13/298 (4%)
Query: 229 EDFDNRLVSHLAEEFKRKCRSASDVGDH---HGDAHF-VVQSLLQNFFCGKSLNLSINPD 284
ED NR + L + S SD+ D G VQ + FF GK +NPD
Sbjct: 310 EDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRXPXVQKKVAEFF-GKEPRKDVNPD 368
Query: 285 EXXXXXXXXXXXILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQ 344
E +L+GD ++DVLL+DVTPLSLGIET GGV T LI +NT IP K +Q
Sbjct: 369 EAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETXGGVXTTLIAKNTTIPTKHSQ 424
Query: 345 TFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGIL 404
F+T DNQ AVTI V +GER DN LG F+L GI PAPRG P+I+VTFD+DA+GIL
Sbjct: 425 VFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGXPQIEVTFDIDADGIL 484
Query: 405 NVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYV 464
+V+AKD +SGK Q ITIK G L+++EI + + DAE + D K +E + RN + +
Sbjct: 485 HVSAKDKNSGKEQKITIKASSG-LNEDEIQKXVRDAEANAEADRKCEELVQTRNQGDHLL 543
Query: 465 FNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPL 522
+ ++ +++AG+KL +K+ A L DK + K Q+L + L
Sbjct: 544 HSTRKQVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKXQELAQVSQKL 598
>pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
pdb|7HSC|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
Length = 159
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 119/159 (74%), Positives = 143/159 (89%)
Query: 303 SSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFE 362
S +QD+LL+DVTPLSLGIETAGGVMT LI+RNT IP KQTQTFTTY+DNQP V IQV+E
Sbjct: 1 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 60
Query: 363 GERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIK 422
GERAMTKDNNLLG F+LTGIPPAPRGVP+I+VTFD+DANGILNV+A D S+GK ITI
Sbjct: 61 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 120
Query: 423 NDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE 461
NDKGRLSKE+I+RM+ +AE+YK EDEKQ++++S++N+LE
Sbjct: 121 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From
Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis
State
pdb|4ANI|C Chain C, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|D Chain D, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|G Chain G, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|H Chain H, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
Length = 509
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/243 (53%), Positives = 168/243 (69%), Gaps = 31/243 (12%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
IGIDLGTT SCVAV + G+V++I N +GNRTTPS VAF + ERL+G+ AK Q NP NT
Sbjct: 5 IGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NT 63
Query: 64 VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTK 123
+ KR +G + +VE +G K + P+EIS+++L
Sbjct: 64 IISIKRHMGTDY-------------------------KVEIEG--KQYTPQEISAIILQY 96
Query: 124 MKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLD 183
+K AE YLG V AVITVPAYFNDAQRQATKDAG IAGL V RI+NEPTAAALAYGLD
Sbjct: 97 LKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLD 156
Query: 184 KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 243
K + ++ +L++DLGGGTFDVSIL + +G +FEV++TAGD HLGG+DFD ++ +L +F
Sbjct: 157 K--EEDQTILVYDLGGGTFDVSILELGDG-VFEVKATAGDNHLGGDDFDQVIIDYLVNQF 213
Query: 244 KRK 246
K++
Sbjct: 214 KQE 216
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 128/186 (68%), Gaps = 5/186 (2%)
Query: 273 CGKSLNLSINPDEXXXXXXXXXXXILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLI 332
GK + +NPDE +++G+ ++DV+L+DVTPLSLGIET GGV TKLI
Sbjct: 326 LGKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPLSLGIETMGGVFTKLI 381
Query: 333 ERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKI 392
ERNT IP ++Q FTT ADNQ V I V +GER M DN LG F LTGIPPAPRGVP+I
Sbjct: 382 ERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQI 441
Query: 393 DVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKE 452
+VTFD+DANGI++V AKD + K Q+ITIK+ G LS+EEI RMI +AE + D K+KE
Sbjct: 442 EVTFDIDANGIVHVRAKDLGTNKEQSITIKSSSG-LSEEEIQRMIKEAEENAEADRKRKE 500
Query: 453 RISARN 458
RN
Sbjct: 501 AAELRN 506
>pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein
F44e5.5 From C.Elegans.
pdb|3DOB|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein
F44e5.5 From C.Elegans
Length = 152
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 104/149 (69%), Positives = 134/149 (89%)
Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
DV PLSLGIETAGGVMT LI+RNTRIP K +TFTTYADNQP V+IQV+EGERAMT+DN+
Sbjct: 4 DVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNH 63
Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEE 432
LGTF+L+GIPPAPRGVP+I+VTF++DANGILNV+A+D S+GKS ITI+N+KGRL++ +
Sbjct: 64 RLGTFELSGIPPAPRGVPQIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSD 123
Query: 433 IDRMINDAERYKDEDEKQKERISARNNLE 461
IDRM+++A++++ ED +Q+ER+ ARN LE
Sbjct: 124 IDRMVHEAKQFEKEDGEQRERVQARNQLE 152
>pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2
Protein From Saccharomyces Cerevisiae
Length = 152
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 122/149 (81%)
Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
DV L+LGIET GGVMT LI+RNT IP K++Q F+T DNQP V I+V+EGERAM+KDNN
Sbjct: 4 DVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNN 63
Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEE 432
LLG F+LTGIPPAPRGVP+I+VTF LDANGIL V+A D +GKS++ITI NDKGRL++EE
Sbjct: 64 LLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEE 123
Query: 433 IDRMINDAERYKDEDEKQKERISARNNLE 461
IDRM+ +AE++ ED K ++ +RN LE
Sbjct: 124 IDRMVEEAEKFASEDASIKAKVESRNKLE 152
>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D
Precursor From C.Elegans
Length = 152
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/149 (60%), Positives = 119/149 (79%)
Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
DV PL+LGIET GGVMTKLI RNT IP K++Q F+T AD+Q AV+I ++EGER M DN+
Sbjct: 4 DVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNH 63
Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEE 432
LG FD+TGIPPAPRGVP+I+VTF++D NGIL+V+A+D +G +TI ND RLS E+
Sbjct: 64 KLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPED 123
Query: 433 IDRMINDAERYKDEDEKQKERISARNNLE 461
I+RMINDA+++ +D+ QKE++ +RN LE
Sbjct: 124 IERMINDADKFAADDQAQKEKVESRNELE 152
>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPO|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPP|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPP|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPQ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|E Chain E, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|F Chain F, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3QNJ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|3QNJ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|4E81|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
pdb|4E81|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
Length = 219
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 140/220 (63%), Gaps = 1/220 (0%)
Query: 309 VLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 368
VLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T DNQ AVTI V +GER
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRA 60
Query: 369 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRL 428
DN LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK G L
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-L 119
Query: 429 SKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCRE 488
+++EI +M+ DAE + D K +E + RN + + + ++ +++AG+KL +K+
Sbjct: 120 NEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 179
Query: 489 ECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 528
A L A E +L Q+ + M + + H
Sbjct: 180 ALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHA 219
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1
Selenomethionyl Crystals
Length = 219
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 139/220 (63%), Gaps = 1/220 (0%)
Query: 309 VLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 368
VLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T DNQ AVTI V +GER
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRA 60
Query: 369 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRL 428
DN LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK G L
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-L 119
Query: 429 SKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCRE 488
+++EI +M+ DAE + D K E + RN + + + ++ +++AG+KL +K+
Sbjct: 120 NEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 179
Query: 489 ECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 528
A L A E +L Q+ + M + + H
Sbjct: 180 ALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHA 219
>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKY|B Chain B, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKZ|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1 Native
Crystals
Length = 219
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 140/220 (63%), Gaps = 1/220 (0%)
Query: 309 VLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 368
VLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T DNQ AV+I V +GER
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRA 60
Query: 369 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRL 428
DN LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK G L
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-L 119
Query: 429 SKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCRE 488
+++EI +M+ DAE + D K +E + RN + + + ++ +++AG+KL +K+
Sbjct: 120 NEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIES 179
Query: 489 ECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 528
A L A E +L Q+ + M + + H
Sbjct: 180 ALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHA 219
>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak,
Minimized Average Structure
pdb|2BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, 25
Structures
Length = 191
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 127/173 (73%), Gaps = 1/173 (0%)
Query: 306 IQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGER 365
++DVLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T DNQ AVTI V +GER
Sbjct: 16 VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGER 75
Query: 366 AMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDK 425
DN LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK
Sbjct: 76 KRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASS 135
Query: 426 GRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKL 478
G L+++EI +M+ DAE + D K +E + RN + + + ++ +++AG+KL
Sbjct: 136 G-LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKL 187
>pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda
Prote (Mortalin)
pdb|3N8E|B Chain B, Substrate Binding Domain Of The Human Heat Shock 70kda
Prote (Mortalin)
Length = 182
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 120/161 (74%), Gaps = 1/161 (0%)
Query: 312 VDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDN 371
+DVTPLSLGIET GGV TKLI RNT IP K++Q F+T AD Q V I+V +GER M DN
Sbjct: 23 MDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDN 82
Query: 372 NLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKE 431
LLG F L GIPPAPRGVP+I+VTFD+DANGI++V+AKD +G+ Q I I++ G LSK+
Sbjct: 83 KLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGG-LSKD 141
Query: 432 EIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALD 472
+I+ M+ +AE+Y +ED ++KER+ A N E + + + ++
Sbjct: 142 DIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKME 182
>pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|C Chain C, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|D Chain D, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans
Length = 151
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/149 (59%), Positives = 111/149 (74%), Gaps = 1/149 (0%)
Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
DVTPLSLGIET GG+MTKLI RNT IP K++Q F+T AD Q V I+VF+GER M N
Sbjct: 4 DVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNK 63
Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEE 432
LLG F L GIPPAPRGVP+++VTFD+DANGI+NV+A+D +GK Q I I++ G LSK++
Sbjct: 64 LLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGG-LSKDQ 122
Query: 433 IDRMINDAERYKDEDEKQKERISARNNLE 461
I+ MI +AE+ ED K+KE + N E
Sbjct: 123 IENMIKEAEKNAAEDAKRKELVEVINQAE 151
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 675
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 144/251 (57%), Gaps = 7/251 (2%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
G+DLG S +AV + ++I+ N+ NR+TPS V F R +G+ KN+ N +NT
Sbjct: 5 FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNT 64
Query: 64 VFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLT 122
V + KR+IG + P +Q+ KH+ +V D K +V F GE+ F+ ++++M +
Sbjct: 65 VANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFID 124
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
K+K+T + ++ D I VP ++ + QR DA IAGLN +RIVN+ TAA ++YG+
Sbjct: 125 KVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGI 184
Query: 183 DKN--LKGE---RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237
K +GE R V D+G ++ SI++ +G L +V TA D H GG DFD +
Sbjct: 185 FKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQL-KVLGTACDKHFGGRDFDLAITE 243
Query: 238 HLAEEFKRKCR 248
H A+EFK K +
Sbjct: 244 HFADEFKTKYK 254
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 668
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 144/251 (57%), Gaps = 7/251 (2%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
G+DLG S +AV + ++I+ N+ NR+TPS V F R +G+ KN+ N +NT
Sbjct: 7 FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNT 66
Query: 64 VFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLT 122
V + KR+IG + P +Q+ KH+ +V D K +V F GE+ F+ ++++M +
Sbjct: 67 VANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFID 126
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
K+K+T + ++ D I VP ++ + QR DA IAGLN +RIVN+ TAA ++YG+
Sbjct: 127 KVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGI 186
Query: 183 DKN--LKGE---RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237
K +GE R V D+G ++ SI++ +G L +V TA D H GG DFD +
Sbjct: 187 FKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQL-KVLGTACDKHFGGRDFDLAITE 245
Query: 238 HLAEEFKRKCR 248
H A+EFK K +
Sbjct: 246 HFADEFKTKYK 256
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
pdb|2QXL|B Chain B, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
Length = 658
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 144/251 (57%), Gaps = 7/251 (2%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
G+DLG S +AV + ++I+ N+ NR+TPS V F R +G+ KN+ N +NT
Sbjct: 4 FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNT 63
Query: 64 VFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLT 122
V + KR+IG + P +Q+ KH+ +V D K +V F GE+ F+ ++++M +
Sbjct: 64 VANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFID 123
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
K+K+T + ++ D I VP ++ + QR DA IAGLN +RIVN+ TAA ++YG+
Sbjct: 124 KVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGI 183
Query: 183 DKN--LKGE---RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237
K +GE R V D+G ++ SI++ +G L +V TA D H GG DFD +
Sbjct: 184 FKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQL-KVLGTACDKHFGGRDFDLAITE 242
Query: 238 HLAEEFKRKCR 248
H A+EFK K +
Sbjct: 243 HFADEFKTKYK 253
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 675
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 142/251 (56%), Gaps = 7/251 (2%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
G+DLG S +AV + ++I+ N+ NR+TPS V F R +G+ KN+ N +NT
Sbjct: 5 FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNT 64
Query: 64 VFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLT 122
V + KR+IG + P +Q+ KH+ +V D K +V F GE+ F+ ++++ +
Sbjct: 65 VANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAXFID 124
Query: 123 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 182
K+K+T + ++ D I VP ++ + QR DA IAGLN +RIVN+ TAA ++YG+
Sbjct: 125 KVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGI 184
Query: 183 DKN--LKGE---RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237
K +GE R V D+G ++ SI + +G L +V TA D H GG DFD +
Sbjct: 185 FKTDLPEGEEKPRIVAFVDIGHSSYTCSIXAFKKGQL-KVLGTACDKHFGGRDFDLAITE 243
Query: 238 HLAEEFKRKCR 248
H A+EFK K +
Sbjct: 244 HFADEFKTKYK 254
>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak
Bound To The Peptide Nrllltg
Length = 135
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 89/116 (76%)
Query: 311 LVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKD 370
+VDVTPLSLGIET GGVMT LI +NT IP K +Q F+T DNQ AVTI V +GER D
Sbjct: 19 MVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD 78
Query: 371 NNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 426
N LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK G
Sbjct: 79 NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 134
>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In
The Apo Form
Length = 115
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 87/114 (76%)
Query: 313 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 372
DVTPLSLGIET GGVMT LI +NT IP K +Q F+T DNQ AVTI V +GER DN
Sbjct: 1 DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNK 60
Query: 373 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 426
LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK G
Sbjct: 61 SLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 114
>pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu
Recognition Peptide Elppvkihc
Length = 227
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 113/205 (55%), Gaps = 16/205 (7%)
Query: 312 VDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDN 371
+DV PLSLG+ET GG++ K+I RNT IP + Q FTT+ D Q A++I V +GER + +D
Sbjct: 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDC 60
Query: 372 NLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKE 431
L F L GIP P G I VTF +DA+G+L+VTA + S+G +I +K G L+
Sbjct: 61 RSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG-LTDS 119
Query: 432 EIDRMINDAERYKDEDEKQK----ERISARNNLEAY-----------VFNVKQALDDAGN 476
EI MI D+ Y ++D K + +++ A LE+ +Q +DDA
Sbjct: 120 EIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAAA 179
Query: 477 KLTESEKSRCREECDATLKWLDNNT 501
L+E + + + +K +D T
Sbjct: 180 HLSEVAQGDDVDAIEQAIKNVDKQT 204
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
pdb|4GNI|B Chain B, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
Length = 409
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 127/252 (50%), Gaps = 4/252 (1%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
IGI G + S +A K E+IAN+ G+R P+ +++ D + G AKN + NP+NT
Sbjct: 16 IGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNT 75
Query: 64 VFDAKRLIGRKFD--DPKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVL 121
V + ++G+ F DP H N K + E E T EI++ L
Sbjct: 76 VAYFRDILGQDFKSVDPTHNHASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYL 135
Query: 122 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY- 180
++ A YLG V AVIT+P F + Q+ A A A A L V+++++EP AA LAY
Sbjct: 136 RRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYD 195
Query: 181 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240
+ ++ +++ DLGG DV++L+ G ++ + +T D G D L+ H +
Sbjct: 196 ARPEATISDKIIVVADLGGSRSDVTVLASRSG-MYTILATVHDYEYHGIALDKVLIDHFS 254
Query: 241 EEFKRKCRSASD 252
+EF +K A D
Sbjct: 255 KEFLKKNPGAKD 266
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
pdb|1XQS|D Chain D, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
Length = 191
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/68 (80%), Positives = 62/68 (91%), Gaps = 1/68 (1%)
Query: 179 AYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
A GLD+ KGERNVLIFDLGGGTFDVSIL+ID+G +FEV++TAGDTHLGGEDFDNRLV+H
Sbjct: 2 AMGLDRTGKGERNVLIFDLGGGTFDVSILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNH 60
Query: 239 LAEEFKRK 246
EEFKRK
Sbjct: 61 FVEEFKRK 68
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 18/22 (81%)
Query: 264 VQSLLQNFFCGKSLNLSINPDE 285
VQ LLQ+FF G+ LN SINPDE
Sbjct: 166 VQKLLQDFFNGRDLNKSINPDE 187
>pdb|3LOF|A Chain A, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|B Chain B, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|C Chain C, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|D Chain D, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|E Chain E, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|F Chain F, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b
Length = 113
Score = 72.8 bits (177), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 452 ERISARNNLEAYVFNVKQALDDAG--NKLTESEKSRCREECDATLKWLDNNTLADKEEYQ 509
ER+SA+N LE+Y FN K A++D G K++E++K + ++C + WLD NTLA+K+E++
Sbjct: 6 ERVSAKNALESYAFNXKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFE 65
Query: 510 DKLQQLQKSCMPLMSKMH 527
K ++L++ C P++S ++
Sbjct: 66 HKRKELEQVCNPIISGLY 83
>pdb|2LMG|A Chain A, Solution Structure Of The C-Terminal Domain (537-610) Of
Human Heat Shock Protein 70
Length = 75
Score = 68.6 bits (166), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 455 SARNNLEAYVFNVKQALDDAG--NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKL 512
SA+N LE+Y FN+K A++D G K++E++K + ++C + WLD NTLA+K+E++ K
Sbjct: 2 SAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKR 61
Query: 513 QQLQKSCMPLMSKM 526
++L++ C P++S +
Sbjct: 62 KELEQVCNPIISGL 75
>pdb|2P32|A Chain A, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|B Chain B, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|C Chain C, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|D Chain D, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|E Chain E, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|F Chain F, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
Length = 120
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 460 LEAYVFNVKQALDDAG--NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 517
LE+Y FN+KQ ++D +K++ +K + ++CD LKWLD+N A+KEE++ + + L+
Sbjct: 23 LESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEG 82
Query: 518 SCMPLMSKMH 527
P++SK++
Sbjct: 83 LANPIISKLY 92
>pdb|1JCF|A Chain A, Mreb From Thermotoga Maritima, Trigonal
pdb|1JCG|A Chain A, Mreb From Thermotoga Maritima, Amppnp
pdb|2WUS|A Chain A, Bacterial Actin Mreb Assembles In Complex With Cell Shape
Protein Rodz
pdb|2WUS|B Chain B, Bacterial Actin Mreb Assembles In Complex With Cell Shape
Protein Rodz
Length = 344
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 61/246 (24%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
IGIDLGT + V F +GK I+ N+ PS +A T G+ K
Sbjct: 6 IGIDLGTANTLV--FLRGK-GIVVNE------PSVIAIDSTT---GEILKVG-------- 45
Query: 64 VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEF-----KGERKTFAPEEISS 118
+AK +IG+ K + M+ V+ D + + + + KG F P
Sbjct: 46 -LEAKNMIGKTPATIKAIRPMRDG---VIADYTVALVMLRYFINKAKGGMNLFKPR---- 97
Query: 119 MVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAAL 178
VI VP D +R+A DAG AG + + ++ EP AAA+
Sbjct: 98 --------------------VVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAI 137
Query: 179 AYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
L N++ ++ D+GGGT +V+++S+ +E AGD + D +V +
Sbjct: 138 GSNL--NVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGD------EMDEAIVQY 189
Query: 239 LAEEFK 244
+ E ++
Sbjct: 190 VRETYR 195
>pdb|1UD0|A Chain A, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|B Chain B, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|C Chain C, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|D Chain D, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
Length = 113
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 460 LEAYVFNVKQALDDAG--NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 517
LE+Y FN K ++D K+ + +K + ++C+ + WLD N A+KEE++ + ++L+K
Sbjct: 9 LESYAFNXKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEK 68
Query: 518 SCMPLMSKMH 527
C P+++K++
Sbjct: 69 VCNPIITKLY 78
>pdb|1JCE|A Chain A, Mreb From Thermotoga Maritima
Length = 344
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 102/246 (41%), Gaps = 61/246 (24%)
Query: 4 IGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNT 63
IGIDLGT + V F +GK I+ N+ PS +A T G+ K
Sbjct: 6 IGIDLGTANTLV--FLRGK-GIVVNE------PSVIAIDSTT---GEILKVG-------- 45
Query: 64 VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDRSKPKIQVEF-----KGERKTFAPEEISS 118
+AK IG+ P + ++ V+ D + + + + KG F P
Sbjct: 46 -LEAKNXIGKT---PATIKAIRPXRDGVIADYTVALVXLRYFINKAKGGXNLFKPR---- 97
Query: 119 MVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAAL 178
VI VP D +R+A DAG AG + + ++ EP AAA+
Sbjct: 98 --------------------VVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPXAAAI 137
Query: 179 AYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238
L N++ + D+GGGT +V+++S+ +E AGD + D +V +
Sbjct: 138 GSNL--NVEEPSGNXVVDIGGGTTEVAVISLGSIVTWESIRIAGD------EXDEAIVQY 189
Query: 239 LAEEFK 244
+ E ++
Sbjct: 190 VRETYR 195
>pdb|3H1Q|A Chain A, Crystal Structure Of Ethanolamine Utilization Protein Eutj
From Carboxydothermus Hydrogenoformans
pdb|3H1Q|B Chain B, Crystal Structure Of Ethanolamine Utilization Protein Eutj
From Carboxydothermus Hydrogenoformans
Length = 272
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 14/110 (12%)
Query: 120 VLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALA 179
++ ++K E LG + A +P +A A AGL ++ +V+EP AAA A
Sbjct: 76 IVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARA 135
Query: 180 YGLDKNLKGERNVLIFDLGGGTFDVSILSIDEG---ALFEVRSTAGDTHL 226
G++ ++ D+GGGT +++ I++G A F+ G THL
Sbjct: 136 LGINDG-------IVVDIGGGTTGIAV--IEKGKITATFD--EPTGGTHL 174
>pdb|4DUT|A Chain A, The Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis
pdb|4DUT|B Chain B, The Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis
pdb|4EK2|A Chain A, The Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis Bound To Deoxyadenosine
Monophosphate
pdb|4EK2|B Chain B, The Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis Bound To Deoxyadenosine
Monophosphate
pdb|4HR2|A Chain A, Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis Bound To Adp
pdb|4HR2|B Chain B, Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis Bound To Adp
Length = 145
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 356 VTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTS 412
V IQV EGE A+ K+ +L+G D A +G + D +DAN + A +T+
Sbjct: 76 VMIQVLEGEDAILKNRDLMGATDPKK---AEKGTIRADFADSIDANAVHGSDAPETA 129
>pdb|3CVG|A Chain A, Crystal Structure Of A Periplasmic Putative Metal Binding
Protein
pdb|3CVG|B Chain B, Crystal Structure Of A Periplasmic Putative Metal Binding
Protein
pdb|3CVG|C Chain C, Crystal Structure Of A Periplasmic Putative Metal Binding
Protein
pdb|3CVG|D Chain D, Crystal Structure Of A Periplasmic Putative Metal Binding
Protein
Length = 294
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Query: 6 IDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIG 49
+D+G TYS VA E I+ G +PSY AF D LIG
Sbjct: 75 VDVGITYSPVA-------ERISIKHGISESPSYYAFRDHFXLIG 111
>pdb|3T8Q|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME Family Protein From Hoeflea
Phototrophica
pdb|3T8Q|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME Family Protein From Hoeflea
Phototrophica
Length = 370
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 407 TAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFN 466
T + S ++IT K++ RLS+ DR DA +++ E + + E V
Sbjct: 113 TVRAYGSSMKRDITPKDEAARLSRLR-DRFGFDAFKFRIGAECGRGQDEWPGRTEEIVPT 171
Query: 467 VKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEE 507
++ A+DD+ L ++ E+ K L+ N ++ EE
Sbjct: 172 IRAAMDDSVALLVDANSCYGPEQAIEVGKMLEQNGISHYEE 212
>pdb|3HZ3|A Chain A, Lactobacillus Reuteri N-Terminally Truncated Glucansucrase
Gtf180(D1025n)-Sucrose Complex
Length = 1039
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 409 KDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVK 468
KDT +G + + ++ DKG +S +E R N+A Y D+K E ++ + + + K
Sbjct: 34 KDTGAGTNA-LKLQFDKGTISADEQYRRGNEAYSY---DDKSIENVNGYLTADTW-YRPK 88
Query: 469 QALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMS 524
Q L D G T+S+++ R + W + T A Y + L + +P S
Sbjct: 89 QILKD-GTTWTDSKETDMRPIL--MVWWPNTVTQAYYLNYMKQYGNLLPASLPSFS 141
>pdb|3KLK|A Chain A, Crystal Structure Of Lactobacillus Reuteri N-Terminally
Truncated Glucansucrase Gtf180 In Triclinic Apo- Form
Length = 1039
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 409 KDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVK 468
KDT +G + + ++ DKG +S +E R N+A Y D+K E ++ + + + K
Sbjct: 34 KDTGAGTNA-LKLQFDKGTISADEQYRRGNEAYSY---DDKSIENVNGYLTADTW-YRPK 88
Query: 469 QALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMS 524
Q L D G T+S+++ R + W + T A Y + L + +P S
Sbjct: 89 QILKD-GTTWTDSKETDMRPIL--MVWWPNTVTQAYYLNYMKQYGNLLPASLPSFS 141
>pdb|3KLL|A Chain A, Crystal Structure Of Lactobacillus Reuteri N-Terminally
Truncated Glucansucrase Gtf180-Maltose Complex
Length = 1039
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 409 KDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVK 468
KDT +G + + ++ DKG +S +E R N+A Y D+K E ++ + + + K
Sbjct: 34 KDTGAGTNA-LKLQFDKGTISADEQYRRGNEAYSY---DDKSIENVNGYLTADTW-YRPK 88
Query: 469 QALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMS 524
Q L D G T+S+++ R + W + T A Y + L + +P S
Sbjct: 89 QILKD-GTTWTDSKETDXRPIL--XVWWPNTVTQAYYLNYXKQYGNLLPASLPSFS 141
>pdb|4A61|A Chain A, Parm From Plasmid R1 In Complex With Amppnp
Length = 326
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 173 PTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLG 227
P + Y + + L ++LI DLGG T D+S + G L + GD+ LG
Sbjct: 153 PESIPAGYEVLQELDERDSLLIIDLGGTTLDISQVM---GKLSGISKIYGDSSLG 204
>pdb|3VGU|A Chain A, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGU|B Chain B, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGU|C Chain C, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGU|D Chain D, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGU|E Chain E, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGU|F Chain F, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGU|G Chain G, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGU|H Chain H, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|A Chain A, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|B Chain B, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|C Chain C, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|D Chain D, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|E Chain E, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|F Chain F, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|G Chain G, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|H Chain H, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|I Chain I, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|J Chain J, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|K Chain K, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|L Chain L, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|M Chain M, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|N Chain N, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|O Chain O, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGV|P Chain P, E134a Mutant Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
Length = 141
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 356 VTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGI 403
V +QV EGE A+ + +L+G T A G + D +DAN +
Sbjct: 72 VVVQVLEGENAIAANRDLMGA---TNPKEAEAGTIRADYAQSIDANAV 116
>pdb|3VGS|A Chain A, Wild-Type Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGS|B Chain B, Wild-Type Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGT|A Chain A, Wild-Type Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGT|B Chain B, Wild-Type Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGT|C Chain C, Wild-Type Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGT|D Chain D, Wild-Type Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
pdb|3VGT|E Chain E, Wild-Type Nucleoside Diphosphate Kinase Derived From
Halomonas Sp. 593
Length = 141
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 356 VTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGI 403
V +QV EGE A+ + +L+G T A G + D +DAN +
Sbjct: 72 VVVQVLEGENAIAANRDLMGA---TNPKEAEAGTIRADYAQSIDANAV 116
>pdb|4A62|A Chain A, Parm From R1 Plasmid In Complex With Peptide From C-
Terminus Of Parr
pdb|4A62|B Chain B, Parm From R1 Plasmid In Complex With Peptide From C-
Terminus Of Parr
Length = 320
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 173 PTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLG 227
P + Y + + L ++LI DLGG T D+S + G L + GD+ LG
Sbjct: 147 PESIPAGYEVLQELDEADSLLIIDLGGTTLDISQVM---GKLSGISKIYGDSSLG 198
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,960,378
Number of Sequences: 62578
Number of extensions: 659003
Number of successful extensions: 1594
Number of sequences better than 100.0: 98
Number of HSP's better than 100.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1355
Number of HSP's gapped (non-prelim): 154
length of query: 549
length of database: 14,973,337
effective HSP length: 104
effective length of query: 445
effective length of database: 8,465,225
effective search space: 3767025125
effective search space used: 3767025125
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 54 (25.4 bits)