Query psy3431
Match_columns 549
No_of_seqs 349 out of 2337
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 16:33:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3431.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3431hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 7.1E-94 2.4E-98 777.4 55.9 513 1-528 1-604 (605)
2 3d2f_A Heat shock protein homo 100.0 9.5E-94 3.2E-98 781.3 54.6 522 1-530 2-628 (675)
3 2kho_A Heat shock protein 70; 100.0 1.6E-91 5.3E-96 759.0 50.8 512 2-528 3-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 3.3E-87 1.1E-91 718.6 35.5 469 2-471 5-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 6.5E-76 2.2E-80 626.3 39.3 423 2-461 3-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 8.2E-54 2.8E-58 445.2 28.9 299 1-300 23-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 6.6E-52 2.2E-56 429.7 27.7 296 2-299 19-394 (394)
8 4gni_A Putative heat shock pro 100.0 1.4E-50 4.7E-55 421.4 25.0 297 1-300 13-403 (409)
9 1dkg_D Molecular chaperone DNA 100.0 1.9E-48 6.4E-53 402.0 23.3 291 2-299 3-383 (383)
10 4e81_A Chaperone protein DNAK; 100.0 9.8E-42 3.3E-46 318.4 26.5 215 310-528 2-216 (219)
11 1u00_A HSC66, chaperone protei 100.0 1.1E-38 3.7E-43 301.1 28.6 215 312-530 1-215 (227)
12 3n8e_A Stress-70 protein, mito 100.0 9E-35 3.1E-39 262.1 16.6 165 306-471 17-181 (182)
13 3h0x_A 78 kDa glucose-regulate 100.0 4.1E-32 1.4E-36 238.7 17.3 151 311-461 2-152 (152)
14 3dob_A Heat shock 70 kDa prote 100.0 2.9E-32 9.8E-37 239.2 14.8 151 311-461 2-152 (152)
15 3dqg_A Heat shock 70 kDa prote 100.0 4.8E-32 1.6E-36 237.4 11.6 150 311-461 2-151 (151)
16 1jce_A ROD shape-determining p 100.0 2.1E-31 7.1E-36 270.4 13.8 242 2-299 4-327 (344)
17 2op6_A Heat shock 70 kDa prote 100.0 1.1E-29 3.8E-34 224.8 15.7 151 311-461 2-152 (152)
18 1q5l_A Chaperone protein DNAK; 99.9 8.9E-24 3E-28 181.7 13.5 119 306-424 14-132 (135)
19 2fsj_A Hypothetical protein TA 99.9 1.5E-23 5E-28 211.8 8.3 133 110-245 94-243 (346)
20 3h1q_A Ethanolamine utilizatio 99.8 8.2E-19 2.8E-23 171.5 13.6 168 114-295 70-272 (272)
21 2fxu_A Alpha-actin-1, actin, a 99.7 8.5E-18 2.9E-22 171.9 13.9 186 2-242 6-196 (375)
22 2ych_A Competence protein PILM 99.7 1.1E-18 3.6E-23 179.1 5.4 200 3-239 15-234 (377)
23 2zgy_A Plasmid segregation pro 99.7 2.9E-18 9.8E-23 171.6 8.2 178 109-295 72-319 (320)
24 3lof_A Heat shock 70 kDa prote 99.7 1.2E-16 4E-21 133.4 11.1 101 449-549 3-113 (113)
25 1k8k_A ARP3, actin-like protei 99.7 6.2E-17 2.1E-21 168.1 11.4 104 136-243 107-212 (418)
26 4ehu_A Activator of 2-hydroxyi 99.6 5.2E-15 1.8E-19 144.7 8.5 131 161-299 68-256 (276)
27 2p32_A Heat shock 70 kDa prote 99.5 9.5E-15 3.2E-19 123.0 6.9 100 450-549 13-120 (120)
28 1ud0_A HSC70, 70 kDa heat-shoc 99.5 5.9E-14 2E-18 117.2 6.8 96 453-549 2-113 (113)
29 4a2a_A Cell division protein F 99.4 1E-12 3.5E-17 135.4 12.7 83 150-240 168-250 (419)
30 1k8k_B ARP2, actin-like protei 99.4 4.8E-14 1.7E-18 144.8 1.0 95 137-242 105-200 (394)
31 3js6_A Uncharacterized PARM pr 99.4 9.9E-13 3.4E-17 132.5 8.8 103 137-243 114-233 (355)
32 4apw_A ALP12; actin-like prote 99.2 3.4E-12 1.2E-16 127.5 1.8 156 136-299 105-326 (329)
33 3qb0_A Actin-related protein 4 99.0 6.9E-10 2.4E-14 115.6 11.6 178 2-241 24-209 (498)
34 3dwl_A Actin-related protein 3 98.8 5.9E-09 2E-13 107.4 8.9 103 137-243 124-228 (427)
35 4fo0_A Actin-related protein 8 98.6 5.4E-07 1.8E-11 97.5 15.7 118 113-242 170-294 (593)
36 4am6_A Actin-like protein ARP8 98.0 1.9E-05 6.4E-10 83.4 10.2 96 137-242 222-318 (655)
37 1hux_A Activator of (R)-2-hydr 97.5 0.004 1.4E-07 59.7 17.9 34 264-298 224-257 (270)
38 1t6c_A Exopolyphosphatase; alp 97.3 0.0014 4.9E-08 64.2 11.5 77 153-235 101-177 (315)
39 2d0o_A DIOL dehydratase-reacti 97.3 0.00024 8.1E-09 72.9 5.8 83 148-240 366-451 (610)
40 1nbw_A Glycerol dehydratase re 97.1 0.00033 1.1E-08 72.0 4.6 80 151-240 371-453 (607)
41 3mdq_A Exopolyphosphatase; str 96.4 0.016 5.4E-07 56.8 10.7 76 153-234 93-169 (315)
42 3cer_A Possible exopolyphospha 95.1 0.14 4.9E-06 50.5 11.5 81 153-235 106-191 (343)
43 1u6z_A Exopolyphosphatase; alp 94.7 0.11 3.7E-06 54.4 10.0 75 154-235 101-176 (513)
44 3bex_A Type III pantothenate k 93.9 0.43 1.5E-05 44.7 11.2 22 1-22 3-24 (249)
45 3vov_A Glucokinase, hexokinase 93.4 0.44 1.5E-05 46.1 10.8 45 161-207 97-141 (302)
46 3djc_A Type III pantothenate k 92.7 0.6 2E-05 44.1 10.2 21 2-22 3-23 (266)
47 3vgl_A Glucokinase; ROK family 92.2 0.81 2.8E-05 44.6 10.9 45 162-208 96-140 (321)
48 4db3_A Glcnac kinase, N-acetyl 91.2 1.3 4.5E-05 43.2 11.1 44 162-207 120-163 (327)
49 4htl_A Beta-glucoside kinase; 90.5 1.7 5.7E-05 41.7 11.0 44 162-207 97-140 (297)
50 2ch5_A NAGK protein; transfera 90.0 6.7 0.00023 38.2 15.2 82 113-201 45-132 (347)
51 1iv0_A Hypothetical protein; r 89.3 0.25 8.4E-06 38.9 3.2 21 1-21 1-21 (98)
52 2e2o_A Hexokinase; acetate and 89.3 3.1 0.00011 39.8 11.9 58 136-201 60-118 (299)
53 2qm1_A Glucokinase; alpha-beta 87.9 2 6.9E-05 41.6 9.6 44 162-207 108-151 (326)
54 3hi0_A Putative exopolyphospha 87.7 1.4 4.8E-05 45.9 8.6 74 152-233 103-177 (508)
55 3r8e_A Hypothetical sugar kina 87.0 1.2 4.2E-05 43.2 7.4 43 163-207 119-161 (321)
56 3epq_A Putative fructokinase; 86.3 3.7 0.00013 39.4 10.3 44 162-207 97-140 (302)
57 2ap1_A Putative regulator prot 86.2 3.9 0.00013 39.7 10.5 44 162-207 120-163 (327)
58 2aa4_A Mannac kinase, putative 85.3 3.6 0.00012 39.0 9.6 43 162-207 96-138 (289)
59 2gup_A ROK family protein; sug 84.6 1.9 6.7E-05 41.1 7.3 43 161-207 93-135 (292)
60 2yhx_A Hexokinase B; transfera 83.8 1.9 6.5E-05 44.1 7.1 56 150-209 164-221 (457)
61 1z05_A Transcriptional regulat 82.7 5.6 0.00019 40.3 10.3 44 162-207 208-251 (429)
62 1woq_A Inorganic polyphosphate 82.4 16 0.00053 34.1 12.6 44 162-207 114-158 (267)
63 3mcp_A Glucokinase; structural 82.3 8.3 0.00028 38.1 11.0 44 162-207 108-164 (366)
64 1vhx_A Putative holliday junct 82.1 0.62 2.1E-05 39.8 2.3 20 1-20 3-22 (150)
65 3o8m_A Hexokinase; rnaseh-like 82.0 4.1 0.00014 41.9 8.8 59 148-210 184-244 (485)
66 2hoe_A N-acetylglucosamine kin 81.6 15 0.00052 36.3 12.8 42 162-207 188-229 (380)
67 1z6r_A MLC protein; transcript 80.0 9.5 0.00033 38.2 10.8 44 162-207 186-229 (406)
68 1hjr_A Holliday junction resol 77.9 2.4 8.1E-05 36.5 4.6 19 1-19 1-19 (158)
69 2yhw_A Bifunctional UDP-N-acet 77.8 16 0.00056 35.4 11.5 44 162-207 131-174 (343)
70 2ivn_A O-sialoglycoprotein end 77.4 45 0.0015 32.2 14.4 22 1-22 1-22 (330)
71 1nu0_A Hypothetical protein YQ 75.0 2.3 7.8E-05 35.7 3.6 20 2-21 4-23 (138)
72 4ep4_A Crossover junction endo 74.0 2.1 7.1E-05 37.1 3.2 19 1-19 1-19 (166)
73 3aap_A Ectonucleoside triphosp 73.4 3.2 0.00011 40.9 4.8 43 166-208 110-158 (353)
74 1sz2_A Glucokinase, glucose ki 72.8 26 0.0009 33.8 11.4 42 160-201 99-150 (332)
75 2zqm_A Prefoldin beta subunit 68.6 27 0.00092 27.8 8.7 51 478-532 63-113 (117)
76 3cj1_A Ectonucleoside triphosp 67.8 5.3 0.00018 40.8 5.1 44 165-208 150-208 (456)
77 1bdg_A Hexokinase; phosphotran 67.3 19 0.00066 36.5 9.2 58 148-209 171-230 (451)
78 4fla_A Regulation of nuclear P 62.9 69 0.0024 27.0 10.4 102 427-528 21-146 (152)
79 2ews_A Pantothenate kinase; PA 60.0 5.4 0.00018 38.0 3.2 21 2-22 21-41 (287)
80 1cza_N Hexokinase type I; stru 58.0 36 0.0012 38.1 10.0 57 148-208 182-241 (917)
81 3zx3_A Ectonucleoside triphosp 55.2 11 0.00039 38.2 4.8 44 165-208 150-199 (452)
82 3o8m_A Hexokinase; rnaseh-like 54.3 24 0.00082 36.2 7.1 31 188-218 78-108 (485)
83 2w40_A Glycerol kinase, putati 54.3 7.1 0.00024 40.4 3.3 18 3-20 6-23 (503)
84 3ll3_A Gluconate kinase; xylul 54.3 7.3 0.00025 40.4 3.4 18 3-20 6-23 (504)
85 3i8b_A Xylulose kinase; strain 53.7 8.1 0.00028 40.2 3.6 20 3-22 7-28 (515)
86 2dpn_A Glycerol kinase; thermu 52.9 6.7 0.00023 40.5 2.8 18 3-20 4-21 (495)
87 1cza_N Hexokinase type I; stru 52.4 38 0.0013 37.9 9.0 58 148-209 630-690 (917)
88 3cet_A Conserved archaeal prot 52.0 10 0.00035 36.7 3.7 36 169-208 110-145 (334)
89 3g25_A Glycerol kinase; IDP007 51.4 8 0.00027 40.1 3.1 18 3-20 8-25 (501)
90 3ifr_A Carbohydrate kinase, FG 50.6 10 0.00036 39.2 3.9 19 3-21 9-27 (508)
91 3f9m_A Glucokinase; hexokinase 50.4 37 0.0013 34.5 7.7 54 188-244 75-136 (470)
92 3ezw_A Glycerol kinase; glycer 50.2 8.4 0.00029 40.2 3.1 17 3-19 6-22 (526)
93 3f9m_A Glucokinase; hexokinase 49.8 67 0.0023 32.7 9.5 58 148-209 183-243 (470)
94 3jvp_A Ribulokinase; PSI-II, N 49.3 10 0.00035 40.0 3.6 19 2-20 6-24 (572)
95 2zf5_O Glycerol kinase; hypert 49.3 9.2 0.00031 39.5 3.2 18 3-20 5-22 (497)
96 2a01_A Apolipoprotein A-I; fou 49.2 15 0.00051 33.9 4.3 76 453-528 134-216 (243)
97 4e1j_A Glycerol kinase; struct 49.2 9.1 0.00031 39.9 3.1 18 3-20 28-45 (520)
98 3l0q_A Xylulose kinase; xlylul 48.5 9.8 0.00034 39.9 3.3 18 3-20 7-24 (554)
99 3h3n_X Glycerol kinase; ATP-bi 47.8 11 0.00036 39.2 3.4 18 3-20 7-24 (506)
100 1zbs_A Hypothetical protein PG 47.5 14 0.00047 35.0 3.9 60 135-201 59-120 (291)
101 4bc3_A Xylulose kinase; transf 47.1 11 0.00039 39.3 3.5 18 3-20 12-29 (538)
102 2uyt_A Rhamnulokinase; rhamnos 46.1 11 0.00037 38.9 3.1 18 2-19 5-22 (489)
103 1nfn_A Apolipoprotein E3; lipi 46.1 87 0.003 27.5 8.6 66 450-530 105-170 (191)
104 2p3r_A Glycerol kinase; glycer 45.9 10 0.00035 39.3 2.9 19 2-20 4-22 (510)
105 3hm8_A Hexokinase-3; glucose, 45.9 1.9E+02 0.0065 29.0 12.1 58 148-209 159-219 (445)
106 3h6e_A Carbohydrate kinase, FG 44.7 9.1 0.00031 39.4 2.3 18 3-20 8-25 (482)
107 1msz_A DNA-binding protein smu 43.7 23 0.0008 26.7 3.8 28 139-166 34-61 (86)
108 2h3g_X Biosynthetic protein; p 43.6 18 0.00061 33.9 3.9 22 2-23 1-22 (268)
109 2itm_A Xylulose kinase, xylulo 43.0 12 0.00041 38.5 2.8 20 3-22 2-22 (484)
110 3hz6_A Xylulokinase; xylulose, 42.1 12 0.00041 38.8 2.7 19 2-20 6-24 (511)
111 1zc6_A Probable N-acetylglucos 41.5 16 0.00055 34.8 3.4 56 137-202 77-134 (305)
112 3cet_A Conserved archaeal prot 41.0 17 0.00057 35.2 3.2 38 2-39 1-43 (334)
113 2d4w_A Glycerol kinase; alpha 40.7 14 0.00046 38.3 2.8 18 3-20 4-21 (504)
114 2yhx_A Hexokinase B; transfera 38.6 95 0.0032 31.4 8.7 56 188-243 59-119 (457)
115 2dfs_A Myosin-5A; myosin-V, in 38.6 1.5E+02 0.0051 33.7 11.1 22 224-245 442-463 (1080)
116 3lay_A Zinc resistance-associa 37.9 2E+02 0.0067 24.8 10.0 65 426-498 66-130 (175)
117 1gs9_A Apolipoprotein E, APOE4 37.9 1.7E+02 0.0056 25.0 8.8 64 426-495 83-146 (165)
118 1saz_A Probable butyrate kinas 37.0 28 0.00095 34.4 4.4 21 1-21 1-22 (381)
119 1zxo_A Conserved hypothetical 36.2 15 0.0005 34.9 2.0 59 136-201 58-118 (291)
120 3tso_C RAB11 family-interactin 34.4 1.3E+02 0.0045 21.8 6.4 43 425-473 11-53 (75)
121 2f9w_A Pantothenate kinase; CO 34.2 30 0.001 32.4 3.8 21 2-22 24-45 (271)
122 3eno_A Putative O-sialoglycopr 32.6 3.3E+02 0.011 25.9 15.3 22 1-22 6-27 (334)
123 1kcf_A Hypothetical 30.2 KD pr 31.5 50 0.0017 30.6 4.7 32 2-43 41-72 (258)
124 1bdg_A Hexokinase; phosphotran 31.4 87 0.003 31.7 7.0 24 188-211 66-89 (451)
125 3r2p_A Apolipoprotein A-I; amp 30.8 87 0.003 27.2 6.1 96 427-528 67-173 (185)
126 1kae_A HDH, histidinol dehydro 28.9 56 0.0019 32.6 4.8 71 135-209 153-244 (434)
127 3en9_A Glycoprotease, O-sialog 28.8 4.9E+02 0.017 26.6 14.4 91 135-233 72-165 (540)
128 4ep4_A Crossover junction endo 26.5 3E+02 0.01 23.4 9.6 88 191-300 2-99 (166)
129 1fxk_A Prefoldin; archaeal pro 26.4 2.2E+02 0.0075 21.8 10.3 49 478-530 58-106 (107)
130 1h7c_A Tubulin-specific chaper 26.3 1.5E+02 0.0051 23.3 6.0 40 478-517 63-103 (108)
131 1f5n_A Interferon-induced guan 26.2 2E+02 0.0068 30.2 8.8 62 457-525 521-582 (592)
132 3nuw_A 2-OXO-3-deoxygalactonat 26.0 77 0.0026 30.0 5.1 20 3-22 8-27 (295)
133 4gic_A HDH, histidinol dehydro 25.0 83 0.0028 31.2 5.2 73 136-209 160-250 (423)
134 3s84_A Apolipoprotein A-IV; fo 24.2 3.4E+02 0.012 25.1 9.2 100 430-529 87-195 (273)
135 3r2p_A Apolipoprotein A-I; amp 23.3 3.2E+02 0.011 23.5 8.4 50 449-498 109-165 (185)
136 3nmd_A CGMP dependent protein 22.5 2.2E+02 0.0076 20.5 6.1 36 438-473 30-65 (72)
137 3mxz_A Tubulin-specific chaper 22.2 3E+02 0.01 21.9 7.6 38 480-517 66-106 (116)
138 2q2r_A Glucokinase 1, putative 22.1 49 0.0017 32.4 3.1 19 2-20 30-48 (373)
139 3tif_A Uncharacterized ABC tra 22.1 55 0.0019 29.7 3.2 34 143-176 142-175 (235)
140 1hjr_A Holliday junction resol 21.8 3.6E+02 0.012 22.6 9.7 43 191-235 2-44 (158)
141 2a01_A Apolipoprotein A-I; fou 21.8 2.2E+02 0.0076 25.8 7.3 71 452-522 111-188 (243)
142 1ji0_A ABC transporter; ATP bi 21.7 66 0.0023 29.2 3.7 33 144-176 137-169 (240)
143 2pcj_A ABC transporter, lipopr 21.6 52 0.0018 29.6 2.9 34 143-176 137-170 (224)
144 2hc5_A ORF 99, hypothetical pr 20.7 1.4E+02 0.0048 23.8 4.9 44 393-444 57-101 (117)
145 3ghg_A Fibrinogen alpha chain; 20.6 2.2E+02 0.0076 28.9 7.3 20 454-473 77-96 (562)
146 2qm1_A Glucokinase; alpha-beta 20.5 2.5E+02 0.0085 26.3 7.8 52 190-242 6-57 (326)
147 2h3g_X Biosynthetic protein; p 20.4 59 0.002 30.3 3.1 29 135-166 56-85 (268)
148 3hm8_A Hexokinase-3; glucose, 20.3 2.2E+02 0.0075 28.6 7.4 25 188-212 57-81 (445)
149 2pfu_A Biopolymer transport EX 20.1 1.8E+02 0.0061 21.8 5.4 41 135-175 56-96 (99)
150 1nbw_A Glycerol dehydratase re 20.0 59 0.002 33.8 3.1 30 138-167 132-161 (607)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=7.1e-94 Score=777.37 Aligned_cols=513 Identities=52% Similarity=0.821 Sum_probs=475.3
Q ss_pred CC-EEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC-ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCCh
Q psy3431 1 MP-AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDP 78 (549)
Q Consensus 1 m~-vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~-~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~ 78 (549)
|+ +||||||||||+||++.+|.+++++|..|++.+||+|+|.++ ++++|..|+.++.++|.++++++|||||+.++++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 54 999999999999999999999999999999999999999854 8999999999999999999999999999999999
Q ss_pred HHHhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHH
Q psy3431 79 KIQQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKD 157 (549)
Q Consensus 79 ~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~ 157 (549)
.++...+.+||.+.. .++.+.+. ..+ ..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~~~--~~~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~ 156 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAADNGDAWVE--VKG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp HHHHHHTTCSSEEEECTTSBEEEE--ETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCceEEE--ECC--EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 999999999999986 45555544 455 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeC----CcEEEEEEecCCCCCCcchHHH
Q psy3431 158 AGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDE----GALFEVRSTAGDTHLGGEDFDN 233 (549)
Q Consensus 158 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~----~~~~~v~~~~~d~~lGG~~iD~ 233 (549)
|++.|||+++++|+||+|||++|++... ..+.++||||+||||||+|++++.+ + .++++++.++.++||.+||.
T Consensus 157 Aa~~AGl~v~~li~EP~AAAlaygl~~~-~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~-~~evla~~gd~~lGG~d~D~ 234 (605)
T 4b9q_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGAFDISIIEIDEVDGEK-TFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHHHTTSC-CSSEEEEEEEECSSCEEEEEEEEEESSSCE-EEEEEEEEEETTCSHHHHHH
T ss_pred HHHHcCCceEEEeCcHHHHHHHhhhhcc-CCCCEEEEEECCCCeEEEEEEEEecCCCCc-eEEEEEecCCCCcChHHHHH
Confidence 9999999999999999999999998764 3578999999999999999999987 6 99999999999999999999
Q ss_pred HHHHHHHHHHHhccc--------------cccccCC--------------------------------------------
Q psy3431 234 RLVSHLAEEFKRKCR--------------SASDVGD-------------------------------------------- 255 (549)
Q Consensus 234 ~l~~~l~~~~~~~~~--------------~~~e~~K-------------------------------------------- 255 (549)
+|++||.++|+.+++ .+||++|
T Consensus 235 ~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~ 314 (605)
T 4b9q_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (605)
T ss_dssp HHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHH
Confidence 999999999987654 5567666
Q ss_pred ---------------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCccccee
Q psy3431 256 ---------------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDV 309 (549)
Q Consensus 256 ---------------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~ 309 (549)
+..+|+.| |++.|+++| +..+..+.||++|||+|||++|+.+++ ..+++
T Consensus 315 ~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~----~~~~~ 389 (605)
T 4b9q_A 315 RSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTG----DVKDV 389 (605)
T ss_dssp HTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHT----SSCSE
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcC----CCCce
Confidence 22233333 999999999 678889999999999999999999998 35789
Q ss_pred EEEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCC
Q psy3431 310 LLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGV 389 (549)
Q Consensus 310 ~~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~ 389 (549)
.+.|++|++||++..+|.|.+|||+|+++|++++.+|++..|+|+.+.|++|||++..+.+|..||+|.|.++||.|+|.
T Consensus 390 ~l~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~ 469 (605)
T 4b9q_A 390 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 469 (605)
T ss_dssp EEECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred EEEeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHH
Q psy3431 390 PKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQ 469 (549)
Q Consensus 390 ~~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~ 469 (549)
++|+|+|++|.||+|+|++.++.||++.+++|.+. .+||++|+++|+++++++.++|+..+++.++||+||+|+|++++
T Consensus 470 ~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~ 548 (605)
T 4b9q_A 470 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRK 548 (605)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTCCEECCEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEcCCcEEEEEEEecCCCcEEEEEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887 57999999999999999999999999999999999999999999
Q ss_pred HhhhccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431 470 ALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 528 (549)
Q Consensus 470 ~l~~~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e 528 (549)
.|++...++++++++.+...++++++||+.+ +.++|++++++|++.++|+..++++
T Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 549 QVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHhhhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9986447899999999999999999999976 6899999999999999999999865
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=9.5e-94 Score=781.33 Aligned_cols=522 Identities=27% Similarity=0.468 Sum_probs=477.6
Q ss_pred CCEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431 1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI 80 (549)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 80 (549)
|++||||||||||+||++.+|.+++|+|+.|++.+||+|+|.+++++||..|+.++.++|.++++++||+||+.++++.+
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 81 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDF 81 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTH
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431 81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG 159 (549)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa 159 (549)
+...+++||.+.. .+|.+.+.+.+.|+...++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|+
T Consensus 82 ~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa 161 (675)
T 3d2f_A 82 EQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA 161 (675)
T ss_dssp HHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 9999999999986 578888888888877899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeEeecchhHHHHhhhcccC-C----CCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHH
Q psy3431 160 AIAGLNVMRIVNEPTAAALAYGLDKN-L----KGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNR 234 (549)
Q Consensus 160 ~~AGl~~~~li~Ep~Aaal~y~~~~~-~----~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~ 234 (549)
+.|||++++||+||+|||++|++.+. . ..+.++||||+||||||+|++++.+| .++++++.|+.++||.+||++
T Consensus 162 ~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g-~~~V~a~~gd~~lGG~d~D~~ 240 (675)
T 3d2f_A 162 RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKG-QLKVLGTACDKHFGGRDFDLA 240 (675)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETT-EEEEEEEEEETTCSHHHHHHH
T ss_pred HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCC-eEEEEEEcCCCCccHHHHHHH
Confidence 99999999999999999999998653 1 35788999999999999999999988 899999999999999999999
Q ss_pred HHHHHHHHHHhccc--------------cccccCC---------------------------------------------
Q psy3431 235 LVSHLAEEFKRKCR--------------SASDVGD--------------------------------------------- 255 (549)
Q Consensus 235 l~~~l~~~~~~~~~--------------~~~e~~K--------------------------------------------- 255 (549)
|++|+.++|+++++ .+||++|
T Consensus 241 l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~ 320 (675)
T 3d2f_A 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEP 320 (675)
T ss_dssp HHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHH
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 99999999877654 5566666
Q ss_pred ----------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEe
Q psy3431 256 ----------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDV 314 (549)
Q Consensus 256 ----------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~ 314 (549)
++++|+.| |++.|++.| +..+..+.||++|||+|||++|+.+++ .++++++.+.|+
T Consensus 321 i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~--~~~v~~~~l~Dv 397 (675)
T 3d2f_A 321 VTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSP--TLRVRPFKFEDI 397 (675)
T ss_dssp HHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCS--SCCCCCCEEEEE
T ss_pred HHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCC--CCcccceEEEee
Confidence 22333333 999999999 577888999999999999999999998 567889999999
Q ss_pred ccccceEEeeCC----eeeEEEccCCCCCcccceeeeeccCCCCcEEEEE-eecCccccc-CCceeeEEEecCCCCCCCC
Q psy3431 315 TPLSLGIETAGG----VMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQV-FEGERAMTK-DNNLLGTFDLTGIPPAPRG 388 (549)
Q Consensus 315 ~~~~igi~~~~~----~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~i-y~ge~~~~~-~~~~ig~~~i~~i~~~~~g 388 (549)
+|++||+++.++ .+.+|||+|++||++++.+|++..++ .+.+ |+|++.++. +|..||+|.|+|+||.|+|
T Consensus 398 ~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~----~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g 473 (675)
T 3d2f_A 398 HPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDF----SMAASYTDITQLPPNTPEQIANWEITGVQLPEGQ 473 (675)
T ss_dssp ECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCE----EEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSC
T ss_pred eecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCc----eEEEEEcCCcccccccCceeeEEEecCcCCCCCC
Confidence 999999999877 49999999999999999999886543 4555 679998887 9999999999999999999
Q ss_pred CC-eEEEEEEeCCCccEEEEEE----------ecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHh
Q psy3431 389 VP-KIDVTFDLDANGILNVTAK----------DTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISAR 457 (549)
Q Consensus 389 ~~-~i~v~~~~d~~g~l~v~~~----------~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~ 457 (549)
.+ +|+|+|.+|.||+|+|++. ++.||+...++|++...+||++++++++++++++..+|+.++++.++|
T Consensus 474 ~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~ 553 (675)
T 3d2f_A 474 DSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRK 553 (675)
T ss_dssp SCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 85 9999999999999999995 688999999999987668999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhcc-CccChhHHHHHHHHHHHHHHHhhcC-CcCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy3431 458 NNLEAYVFNVKQALDDAG-NKLTESEKSRCREECDATLKWLDNN-TLADKEEYQDKLQQLQKSCMPLMSKMHGGA 530 (549)
Q Consensus 458 N~LE~~iy~~r~~l~~~~-~~~~~~e~~~i~~~l~~~~~Wl~~~-~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~ 530 (549)
|+||+|+|++|+.|++.. .++++++++++...|+++++|||++ .+++.++|++|+++|+++++||..|++|+.
T Consensus 554 n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~ 628 (675)
T 3d2f_A 554 NTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKE 628 (675)
T ss_dssp HHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999997644 7899999999999999999999865 578999999999999999999999988763
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=1.6e-91 Score=759.03 Aligned_cols=512 Identities=53% Similarity=0.827 Sum_probs=471.2
Q ss_pred CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeC-CceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI 80 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 80 (549)
.+||||||||||+||++.+|.+++++|+.|++.+||+|+|.. ++++||..|+.+...+|.++++++||+||+.++++.+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 489999999999999999999999999999999999999964 5899999999999999999999999999999999999
Q ss_pred HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431 81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG 159 (549)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa 159 (549)
+...+.+||.++. .++.+.+.+ .| ..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~--~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~ 158 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEECCCCceEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence 9888899999874 566555554 55 689999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEee----CCcEEEEEEecCCCCCCcchHHHHH
Q psy3431 160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSID----EGALFEVRSTAGDTHLGGEDFDNRL 235 (549)
Q Consensus 160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~----~~~~~~v~~~~~d~~lGG~~iD~~l 235 (549)
+.|||+++++++||+|||++|++... ..+..+||||+||||||+|++++. ++ .++++++.|+.++||.+||++|
T Consensus 159 ~~AGl~v~~li~EP~AAAlay~l~~~-~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g-~~~v~a~~gd~~lGG~d~D~~l 236 (605)
T 2kho_A 159 RIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDISIIEIDEVDGEK-TFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTTTSS-SSEEEEEEEEECSSCEEEEEEEEECTTTSC-EEEEEEEEEESSCSGGGTHHHH
T ss_pred HHcCCceEEEecCHHHHHHHhhhccc-CCCCEEEEEECCCCeEEEEEEEEEecCCCC-eEEEEEECCCCCccHHHHHHHH
Confidence 99999999999999999999998754 257889999999999999999998 67 9999999999999999999999
Q ss_pred HHHHHHHHHhccc--------------cccccCC----------------------------------------------
Q psy3431 236 VSHLAEEFKRKCR--------------SASDVGD---------------------------------------------- 255 (549)
Q Consensus 236 ~~~l~~~~~~~~~--------------~~~e~~K---------------------------------------------- 255 (549)
++|+.++|+++++ .+||++|
T Consensus 237 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i 316 (605)
T 2kho_A 237 INYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRS 316 (605)
T ss_dssp HHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGG
T ss_pred HHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHH
Confidence 9999999876543 4455554
Q ss_pred -------------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEE
Q psy3431 256 -------------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLL 311 (549)
Q Consensus 256 -------------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~ 311 (549)
++.+|+.| |++.|++.| +..+..+.||++|||+|||++|+.+++ .++++.+
T Consensus 317 ~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~----~~~~~~l 391 (605)
T 2kho_A 317 IEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTG----DVKDVLL 391 (605)
T ss_dssp TSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTT----SCCCCCC
T ss_pred HHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcC----CccCceE
Confidence 12334443 999999999 567889999999999999999999987 2577889
Q ss_pred EEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCe
Q psy3431 312 VDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPK 391 (549)
Q Consensus 312 ~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~ 391 (549)
.|++|++||+++.+|.|.+|||+|+++|++++.+|++..|+|+.+.|++|||++..+.+|..||+|.|.++|+.|+|.++
T Consensus 392 ~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~ 471 (605)
T 2kho_A 392 LDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQ 471 (605)
T ss_dssp SBCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSC
T ss_pred EeeeeeeccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHh
Q psy3431 392 IDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQAL 471 (549)
Q Consensus 392 i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l 471 (549)
|+|+|.+|.||+|+|++.+..||+...++|++. .+||++|+++++++++++..+|+..+++.++||+||+|+|++|+.|
T Consensus 472 i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 550 (605)
T 2kho_A 472 IEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQV 550 (605)
T ss_dssp EEEEEEECTTSCEEEEEEETTTCCEEEEEECTT-SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCceeEEEEEcCCCceeecccccc-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988 7899999999999999999999999999999999999999999999
Q ss_pred hhccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431 472 DDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 528 (549)
Q Consensus 472 ~~~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e 528 (549)
++...++++++++.+.+.++++++||+++ +.++|++++++|++.++||..|++.
T Consensus 551 ~~~~~~~~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 551 EEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred HhhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 87447899999999999999999999954 8899999999999999999999864
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=3.3e-87 Score=718.60 Aligned_cols=469 Identities=76% Similarity=1.171 Sum_probs=437.8
Q ss_pred CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHHH
Q psy3431 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQ 81 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~ 81 (549)
.+||||||||||+||++.+|.+++++|+.|++++||+|+|.+++++||..|+.++.++|.++++++|||||+.++++.++
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 84 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQ 84 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHHH
T ss_pred CEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHH
Q psy3431 82 QDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAI 161 (549)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~ 161 (549)
..++.+||.++..++.+.+.+.+.+..+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++.
T Consensus 85 ~~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~~ 164 (554)
T 1yuw_A 85 SDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTI 164 (554)
T ss_dssp HHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHT
T ss_pred HHhhcCCeEEEecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999999778888888988888789999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHH
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~ 241 (549)
||++++++++||+|||++|++.+....+..+||||+||||||+|++++.++ .++++++.++.++||.+||++|++|+.+
T Consensus 165 AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g-~~~v~a~~g~~~lGG~d~d~~l~~~l~~ 243 (554)
T 1yuw_A 165 AGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAG-IFEVKSTAGDTHLGGEDFDNRMVNHFIA 243 (554)
T ss_dssp TTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred cCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCC-cEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999998765345789999999999999999999988 9999999999999999999999999999
Q ss_pred HHHhccc--------------cccccCC----------------------------------------------------
Q psy3431 242 EFKRKCR--------------SASDVGD---------------------------------------------------- 255 (549)
Q Consensus 242 ~~~~~~~--------------~~~e~~K---------------------------------------------------- 255 (549)
+|+++++ .+||++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~~ 323 (554)
T 1yuw_A 244 EFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRD 323 (554)
T ss_dssp HHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8876654 4566665
Q ss_pred ---CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEeccccceE
Q psy3431 256 ---HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGI 321 (549)
Q Consensus 256 ---~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~~~igi 321 (549)
++.+|+.| |++.|++.|++.++..+.||++|||+|||++|+.+++...++++++.+.|++|++||+
T Consensus 324 a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~slgi 403 (554)
T 1yuw_A 324 AKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGI 403 (554)
T ss_dssp TTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCEEE
T ss_pred cCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeEEEE
Confidence 11233333 9999999997788889999999999999999999988544567888999999999999
Q ss_pred EeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEEEeCCC
Q psy3431 322 ETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDAN 401 (549)
Q Consensus 322 ~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~~~d~~ 401 (549)
++.+|.+.+|||+|+++|++++.+|++..|+|+.+.|++|||++..+.+|..||+|.|.++|+.|+|.++|+|+|.+|.|
T Consensus 404 ~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~ 483 (554)
T 1yuw_A 404 ETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDAN 483 (554)
T ss_dssp EETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTT
T ss_pred EecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHh
Q psy3431 402 GILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQAL 471 (549)
Q Consensus 402 g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l 471 (549)
|+|+|++.++.||+...++|++...+||++|+++++++++++..+|+..+++.++||+||+|+|++|+.|
T Consensus 484 gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 484 GILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp CCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred ceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998877899999999999999999999999999999999999999998765
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=6.5e-76 Score=626.31 Aligned_cols=423 Identities=57% Similarity=0.917 Sum_probs=384.5
Q ss_pred CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHHH
Q psy3431 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQ 81 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~ 81 (549)
.+||||||||||+||++.+|.+++++|+.|++++||+|+|.+++++||..|+.+...+| ++++++||+||+++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~----- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK----- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-----
Confidence 48999999999999999999999999999999999999998778999999999999999 999999999998542
Q ss_pred hhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHH
Q psy3431 82 QDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAI 161 (549)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~ 161 (549)
+..+| ..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++.
T Consensus 77 --------------------~~~~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~ 134 (509)
T 2v7y_A 77 --------------------VEIEG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRI 134 (509)
T ss_dssp --------------------EEETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred --------------------EEECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 12244 47899999999999999999999999999999999999999999999999999
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHH
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~ 241 (549)
||++++++++||+|||++|++... .+.++||||+||||||++++++.++ .++++++.++.++||.+||+.|++|+.+
T Consensus 135 AGl~~~~li~Ep~AAAlay~~~~~--~~~~vlV~D~GgGT~Dvsv~~~~~g-~~~v~a~~g~~~lGG~d~d~~l~~~l~~ 211 (509)
T 2v7y_A 135 AGLEVERIINEPTAAALAYGLDKE--EDQTILVYDLGGGTFDVSILELGDG-VFEVKATAGDNHLGGDDFDQVIIDYLVN 211 (509)
T ss_dssp TTCEEEEEEEHHHHHHHHTTGGGS--CSEEEEEEEECSSCEEEEEEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred cCCCeEEEecCHHHHHHHHhhccC--CCCEEEEEECCCCeEEEEEEEEcCC-eEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999998764 6789999999999999999999888 9999999999999999999999999999
Q ss_pred HHHhccc--------------cccccCC----------------------------------------------------
Q psy3431 242 EFKRKCR--------------SASDVGD---------------------------------------------------- 255 (549)
Q Consensus 242 ~~~~~~~--------------~~~e~~K---------------------------------------------------- 255 (549)
+|+++++ .+||++|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~ 291 (509)
T 2v7y_A 212 QFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQ 291 (509)
T ss_dssp HHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHH
Confidence 9876543 4556555
Q ss_pred -------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcCCCCcccceeEEEEeccc
Q psy3431 256 -------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPL 317 (549)
Q Consensus 256 -------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~~~~~~~~~~~~~d~~~~ 317 (549)
.+.+|+.| |++.|++.| +..+..+.||++|||+|||++|+.+++. .+++.+.|++|+
T Consensus 292 ~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~p~ 366 (509)
T 2v7y_A 292 ALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPL 366 (509)
T ss_dssp HHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCBCSS
T ss_pred HHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEEEeecc
Confidence 11122222 999999999 5678889999999999999999999872 567889999999
Q ss_pred cceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCeEEEEEE
Q psy3431 318 SLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFD 397 (549)
Q Consensus 318 ~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~~~ 397 (549)
+||+++.+|.+.+|||+|+++|++++..|++..|+|+.+.|++|||++..+.+|..||+|.|.++|+.|+|.++|+|+|+
T Consensus 367 slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~ 446 (509)
T 2v7y_A 367 SLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFD 446 (509)
T ss_dssp EEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEE
T ss_pred ccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHH
Q psy3431 398 LDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE 461 (549)
Q Consensus 398 ~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE 461 (549)
+|.||+|+|++.+..||+...++|++. .+||++|+++++++++++..+|+..+++.++||+||
T Consensus 447 id~~gil~v~a~~~~~g~~~~~~i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 447 IDANGIVHVRAKDLGTNKEQSITIKSS-SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp ECTTSCEEEEEEETTTCCEEEEEECSS-CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred EcCCceEEEEEEEcCCCcEEEEEEEec-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 999999999999999999999999988 779999999999999999999999999999999987
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=8.2e-54 Score=445.24 Aligned_cols=299 Identities=80% Similarity=1.196 Sum_probs=275.4
Q ss_pred CCEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431 1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI 80 (549)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 80 (549)
|++||||||||||+||++.+|.+++++|+.|++++||+|+|.++++++|..|+.++.++|.++++++||++|+.++++.+
T Consensus 23 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~~ 102 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATV 102 (404)
T ss_dssp CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHHH
T ss_pred CCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHH
Q psy3431 81 QQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGA 160 (549)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~ 160 (549)
+...+.+||.+...++.+.+.+.+.++...++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|++
T Consensus 103 ~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~ 182 (404)
T 3i33_A 103 QSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGT 182 (404)
T ss_dssp HHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 99999999999988899999999998888999999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeEeecchhHHHHhhhcccCCC--CCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHH
Q psy3431 161 IAGLNVMRIVNEPTAAALAYGLDKNLK--GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSH 238 (549)
Q Consensus 161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~--~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~ 238 (549)
.||++++.+++||+|||++|+...... .+..+||||+||||+|++++++.++ .++++++.++..+||.+||+.|.++
T Consensus 183 ~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~-~~~v~~~~~~~~lGG~~~d~~l~~~ 261 (404)
T 3i33_A 183 ITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVSH 261 (404)
T ss_dssp HHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETT-EEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCC-eEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 999999999999999999998876533 6789999999999999999999988 9999999999999999999999999
Q ss_pred HHHHHHhccc--------------cccccCC-------------------------------------------------
Q psy3431 239 LAEEFKRKCR--------------SASDVGD------------------------------------------------- 255 (549)
Q Consensus 239 l~~~~~~~~~--------------~~~e~~K------------------------------------------------- 255 (549)
+.++|+.+++ .+||++|
T Consensus 262 l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~ 341 (404)
T 3i33_A 262 LAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKA 341 (404)
T ss_dssp HHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHH
T ss_pred HHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998876543 4566655
Q ss_pred ------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHcC
Q psy3431 256 ------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG 300 (549)
Q Consensus 256 ------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~~ 300 (549)
...+|+.| |++.|++.|++.++..+.||++|||+|||++|+++++
T Consensus 342 l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 342 LRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 11222222 9999999998888999999999999999999999876
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=6.6e-52 Score=429.68 Aligned_cols=296 Identities=66% Similarity=1.037 Sum_probs=272.5
Q ss_pred CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHHH
Q psy3431 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQ 81 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~ 81 (549)
.+||||||||||++|++.+|.+++++|+.|++++||+|+|.++++++|..|+.+..++|.++++++|+++|+.++++.++
T Consensus 19 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 98 (394)
T 3qfu_A 19 TVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQ 98 (394)
T ss_dssp SCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHH
T ss_pred CEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHH
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHH
Q psy3431 82 QDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAI 161 (549)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~ 161 (549)
...+.+||.+...++.+.+.+.+.++...++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~ 178 (394)
T 3qfu_A 99 KDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTI 178 (394)
T ss_dssp HHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999999888899999988888889999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHH
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~ 241 (549)
||++++.+++||+|||++|++... ..+..++|||+||||+|++++++.++ .++++++.++..+||.+||+.|.+++.+
T Consensus 179 aGl~~~~li~Ep~Aaa~~~~~~~~-~~~~~vlV~D~Gggt~dvsv~~~~~~-~~~~~~~~~~~~lGG~~~d~~l~~~l~~ 256 (394)
T 3qfu_A 179 AGLNVLRIVNEPTAAAIAYGLDKS-DKEHQIIVYDLGGGTFDVSLLSIENG-VFEVQATSGDTHLGGEDFDYKIVRQLIK 256 (394)
T ss_dssp TTCEEEEEEEHHHHHHHHTTTTSC-SSCEEEEEEEECSSCEEEEEEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred cCCceEEEecCHHHHHHHHhhccC-CCCceEEEEEcCCCceeEEEEEEeCC-EEEEEEEcCCCCCChHHHHHHHHHHHHH
Confidence 999999999999999999987754 45789999999999999999999988 9999999999999999999999999999
Q ss_pred HHHhccc--------------cccccCC----------------------------------------------------
Q psy3431 242 EFKRKCR--------------SASDVGD---------------------------------------------------- 255 (549)
Q Consensus 242 ~~~~~~~--------------~~~e~~K---------------------------------------------------- 255 (549)
+|..+++ .+||++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~ 336 (394)
T 3qfu_A 257 AFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQD 336 (394)
T ss_dssp HHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8876554 4566665
Q ss_pred ---CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHc
Q psy3431 256 ---HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 299 (549)
Q Consensus 256 ---~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~ 299 (549)
...+|+.| |++.|++.|++.++..+.||++|||+|||++|++++
T Consensus 337 ~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 337 SGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred cCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 11222222 999999999888899999999999999999999874
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.4e-50 Score=421.43 Aligned_cols=297 Identities=29% Similarity=0.473 Sum_probs=257.4
Q ss_pred CCEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431 1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI 80 (549)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 80 (549)
|.+||||||||||+||++.+|.+++++|+.|++++||+|+|.++++++|..|..+..++|.++++++|+++|+.++++.+
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999887765
Q ss_pred HhhcccCCeEEeecCCCceEEEEEc----CceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHH
Q psy3431 81 QQDMKHWPFTVVNDRSKPKIQVEFK----GERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATK 156 (549)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~ 156 (549)
+.. .+++.+...++.+.+.+... ++...++|+++++++|++|++.++.+++.++.++|||||++|++.||++++
T Consensus 93 ~~~--~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~ 170 (409)
T 4gni_A 93 THN--HASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALI 170 (409)
T ss_dssp GGG--TTSCCCEEETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHH
T ss_pred hhh--ccccceecCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHH
Confidence 543 33444455667777766654 355799999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCceeEeecchhHHHHhhhccc-CCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHH
Q psy3431 157 DAGAIAGLNVMRIVNEPTAAALAYGLDK-NLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRL 235 (549)
Q Consensus 157 ~Aa~~AGl~~~~li~Ep~Aaal~y~~~~-~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l 235 (549)
+|++.|||+++.+++||+|||++|+... ....+..+||||+||||+|++++++.++ .++++++.++..+||.+||+.|
T Consensus 171 ~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~-~~~v~~~~~~~~lGG~~~d~~i 249 (409)
T 4gni_A 171 AAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSG-MYTILATVHDYEYHGIALDKVL 249 (409)
T ss_dssp HHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETT-EEEEEEEEEESSSSHHHHHHHH
T ss_pred HHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCC-eEEEEEecCCCCcCHHHHHHHH
Confidence 9999999999999999999999998875 2346889999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHHHHhccc----------------cccccCC--------------------------------------------
Q psy3431 236 VSHLAEEFKRKCR----------------SASDVGD-------------------------------------------- 255 (549)
Q Consensus 236 ~~~l~~~~~~~~~----------------~~~e~~K-------------------------------------------- 255 (549)
++++.++|..+++ .+||++|
T Consensus 250 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~ 329 (409)
T 4gni_A 250 IDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNR 329 (409)
T ss_dssp HHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHH
Confidence 9999999986543 3677777
Q ss_pred -----------CCCChHHH-----------HHHHHHhhhCCC-CC------CCCCChhhHHHccHHHHHHHHcC
Q psy3431 256 -----------HHGDAHFV-----------VQSLLQNFFCGK-SL------NLSINPDEAVAYGAAVQAAILSG 300 (549)
Q Consensus 256 -----------~~~~i~~V-----------i~~~l~~~f~~~-~~------~~~~~~~eava~Gaa~~a~~l~~ 300 (549)
...+|+.| |++.|++.|+.. .+ ..++||++|||+|||++|+....
T Consensus 330 ~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~ 403 (409)
T 4gni_A 330 LVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQE 403 (409)
T ss_dssp HHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhh
Confidence 11223333 999999999654 34 67899999999999999998754
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.9e-48 Score=401.99 Aligned_cols=291 Identities=57% Similarity=0.896 Sum_probs=253.7
Q ss_pred CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeC-CceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHH
Q psy3431 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKI 80 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 80 (549)
.+||||||||||+||++.+|.+++++|+.|++++||+|+|.+ +++++|..|+.+..++|.++++++|++||+.++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 489999999999999999999999999999999999999975 5789999999999999999999999999999999999
Q ss_pred HhhcccCCeEEee-cCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHH
Q psy3431 81 QQDMKHWPFTVVN-DRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG 159 (549)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa 159 (549)
+...+.+||.+.. .++...+.+ +| ..++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 158 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 9888899999874 455555444 55 589999999999999999999999989999999999999999999999999
Q ss_pred HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEee----CCcEEEEEEecCCCCCCcchHHHHH
Q psy3431 160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSID----EGALFEVRSTAGDTHLGGEDFDNRL 235 (549)
Q Consensus 160 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~----~~~~~~v~~~~~d~~lGG~~iD~~l 235 (549)
+.||++++.+++||+|||++|+.... ..+..+||||+||||+|++++++. ++ .++++++.++..+||.+||+.|
T Consensus 159 ~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lVvD~Gggttdvsv~~~~~~~~~~-~~~v~~~~~~~~lGG~~id~~l 236 (383)
T 1dkg_D 159 RIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDISIIEIDEVDGEK-TFEVLATNGDTHLGGEDFDSRL 236 (383)
T ss_dssp HHTTCEESCCCBHHHHHHHHHTCCC--CCEEEEEEEEECSSCEEEEEEEEEC----C-CCEEEEEEEESSCSHHHHHHHH
T ss_pred HHcCCceEEEeccHHHHHHHHHhccC-CCCcEEEEEEcCCCeEEEEEEEEEecCCCC-eEEEEEEeCCCCCCHHHHHHHH
Confidence 99999999999999999999987643 357899999999999999999997 56 7889998898999999999999
Q ss_pred HHHHHHHHHhccc--------------cccccCC----------------------------------------------
Q psy3431 236 VSHLAEEFKRKCR--------------SASDVGD---------------------------------------------- 255 (549)
Q Consensus 236 ~~~l~~~~~~~~~--------------~~~e~~K---------------------------------------------- 255 (549)
.+++.++|..+++ .+||++|
T Consensus 237 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i 316 (383)
T 1dkg_D 237 INYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRS 316 (383)
T ss_dssp HHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHH
Confidence 9999998865432 3444444
Q ss_pred -------------CCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHc
Q psy3431 256 -------------HHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 299 (549)
Q Consensus 256 -------------~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~ 299 (549)
...+|+.| |++.|++.| +.++..+.||++|||+|||++|++|+
T Consensus 317 ~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 317 IELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 11222222 999999999 56788899999999999999998764
No 10
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=9.8e-42 Score=318.38 Aligned_cols=215 Identities=47% Similarity=0.728 Sum_probs=205.7
Q ss_pred EEEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCC
Q psy3431 310 LLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGV 389 (549)
Q Consensus 310 ~~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~ 389 (549)
++.|++|+||||++.+|.|.+|||||++||++++.+|+|..|||+.+.|+||||++..+.+|..||+|.|.|+||+|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHH
Q psy3431 390 PKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQ 469 (549)
Q Consensus 390 ~~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~ 469 (549)
++|+|+|.+|.||+|+|++.+..||+...++|.+. .+||++|+++|+++++++..+|++.|++.++||.||+|+|.+|+
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~-~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~ 160 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK 160 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTT-CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeecc-ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999886 56999999999999999999999999999999999999999999
Q ss_pred HhhhccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431 470 ALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 528 (549)
Q Consensus 470 ~l~~~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e 528 (549)
.|.+...++++++++.+...+.++++||+++ +.++|++++++|++.+.||..|+++
T Consensus 161 ~l~~~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 161 QVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHhhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9987447899999999999999999999986 7899999999999999999999876
No 11
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=1.1e-38 Score=301.11 Aligned_cols=215 Identities=32% Similarity=0.524 Sum_probs=204.4
Q ss_pred EEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCCe
Q psy3431 312 VDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPK 391 (549)
Q Consensus 312 ~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~~ 391 (549)
.|++|++|||++.+|.|.+|||+|++||++++.+|++..|+|+.+.|++|||++..+.+|..||+|.|.|+|++|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHh
Q psy3431 392 IDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQAL 471 (549)
Q Consensus 392 i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l 471 (549)
|+|+|.+|.||+|+|++.+..||+...++|... .+||++++++++++++++..+|+..+++.++||+||+|+|.+|+.|
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~-~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l 159 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGAL 159 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCC-SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEec-cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887 5699999999999999999999999999999999999999999999
Q ss_pred hhccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy3431 472 DDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGA 530 (549)
Q Consensus 472 ~~~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~ 530 (549)
.+...++++++++.+...|+++++||+.+ +.++|++++++|++++.||..|++.++
T Consensus 160 ~~~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 160 AADAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp HHHGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87447899999999999999999999954 689999999999999999999876543
No 12
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=100.00 E-value=9e-35 Score=262.05 Aligned_cols=165 Identities=54% Similarity=0.874 Sum_probs=154.7
Q ss_pred cceeEEEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCC
Q psy3431 306 IQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPA 385 (549)
Q Consensus 306 ~~~~~~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~ 385 (549)
...+.+.|++|++|||++.+|.|.+|||||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHH
Q psy3431 386 PRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVF 465 (549)
Q Consensus 386 ~~g~~~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy 465 (549)
|+|.++|+|+|.+|.||+|+|++.+++||++..++|.+. .+||++|+++|+++++++.++|++.+++.++||.||+|+|
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy 175 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIH 175 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988 8899999999999999999999999999999999999999
Q ss_pred HHHHHh
Q psy3431 466 NVKQAL 471 (549)
Q Consensus 466 ~~r~~l 471 (549)
.+|+.|
T Consensus 176 ~~~~~l 181 (182)
T 3n8e_A 176 DTETKM 181 (182)
T ss_dssp CCSCCC
T ss_pred HHHHhh
Confidence 998765
No 13
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=100.00 E-value=4.1e-32 Score=238.69 Aligned_cols=151 Identities=65% Similarity=1.038 Sum_probs=146.7
Q ss_pred EEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCC
Q psy3431 311 LVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVP 390 (549)
Q Consensus 311 ~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~ 390 (549)
+.|++|++||+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.+|||++..+.+|.+||+|.|.|+||+|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHH
Q psy3431 391 KIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE 461 (549)
Q Consensus 391 ~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE 461 (549)
+|+|+|.+|.||+|+|++.+..||+...++|.+....||++|+++|++++++|..+|+..+++.++||+||
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999987889999999999999999999999999999999986
No 14
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.98 E-value=2.9e-32 Score=239.15 Aligned_cols=151 Identities=69% Similarity=1.117 Sum_probs=142.4
Q ss_pred EEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCC
Q psy3431 311 LVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVP 390 (549)
Q Consensus 311 ~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~ 390 (549)
+.|++|++||+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.+|||++..+.+|.+||+|.|.|+||+|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHH
Q psy3431 391 KIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE 461 (549)
Q Consensus 391 ~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE 461 (549)
+|+|+|.+|.||+|+|++.++.||+...++|.+....||++|+++|+++++++.++|+..+++.++||+||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999887789999999999999999999999999999999875
No 15
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.97 E-value=4.8e-32 Score=237.45 Aligned_cols=150 Identities=59% Similarity=0.935 Sum_probs=144.6
Q ss_pred EEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCC
Q psy3431 311 LVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVP 390 (549)
Q Consensus 311 ~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~ 390 (549)
+.|++|++||+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.+|||++..+.+|.+||+|.|.|+||+|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHH
Q psy3431 391 KIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE 461 (549)
Q Consensus 391 ~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE 461 (549)
+|+|+|.+|.||+|+|++.++.||++..++|.+. .+||++|+++|+++++++.++|+..+++.++||+||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999988 899999999999999999999999999999999875
No 16
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.97 E-value=2.1e-31 Score=270.41 Aligned_cols=242 Identities=28% Similarity=0.381 Sum_probs=176.7
Q ss_pred CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC--c-eEEcHhhHHhhhcCCCchHHHhHHhhCCCCCCh
Q psy3431 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT--E-RLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDP 78 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~--~-~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~ 78 (549)
.+|||||||+||++++..++ .++ .+||+|+|..+ . .++|.+|+.+..++|.++...
T Consensus 4 ~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~------------ 62 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI------------ 62 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE------------
T ss_pred ceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE------------
Confidence 58999999999999875443 222 37999999875 3 479999998877777664310
Q ss_pred HHHhhcccCCeEEeecCCCceEEEEEcCceeee-CHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHH
Q psy3431 79 KIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTF-APEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKD 157 (549)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~ 157 (549)
+|+. + |....+ .++++++++|++++.. ..++ ...+|||||++|++.||+++++
T Consensus 63 --------~p~~----~----------g~i~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~~ 116 (344)
T 1jce_A 63 --------RPMR----D----------GVIADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAILD 116 (344)
T ss_dssp --------CCEE----T----------TEESSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHHH
T ss_pred --------ecCC----C----------CeeCChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHHH
Confidence 1221 1 100112 3566777777665542 1233 4789999999999999999999
Q ss_pred HHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHH
Q psy3431 158 AGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237 (549)
Q Consensus 158 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~ 237 (549)
|++.||++++.+++||+|||++|+.... .+..++|||+||||||+++++... .+ ..++..+||.+||+.|.+
T Consensus 117 a~~~aG~~~~~li~ep~Aaa~~~~~~~~--~~~~~lVvDiGggttdvsv~~~~~--~~----~~~~~~lGG~~id~~l~~ 188 (344)
T 1jce_A 117 AGLEAGASKVFLIEEPMAAAIGSNLNVE--EPSGNMVVDIGGGTTEVAVISLGS--IV----TWESIRIAGDEMDEAIVQ 188 (344)
T ss_dssp HHHHTTCSEEEEEEHHHHHHHHTTCCTT--SSSCEEEEEECSSCEEEEEEETTE--EE----EEEEESCSHHHHHHHHHH
T ss_pred HHHHcCCCeEeccCCHHHHHHhcCCCCC--CCceEEEEEeCCCeEEEEEEEcCC--EE----eeCCCCccChhHHHHHHH
Confidence 9999999999999999999999987643 567899999999999999998632 22 235688999999999999
Q ss_pred HHHHHHHhccc-cccccCC------------------------------------------------------------C
Q psy3431 238 HLAEEFKRKCR-SASDVGD------------------------------------------------------------H 256 (549)
Q Consensus 238 ~l~~~~~~~~~-~~~e~~K------------------------------------------------------------~ 256 (549)
++.++++.... ..||++| .
T Consensus 189 ~l~~~~~~~~~~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~ 268 (344)
T 1jce_A 189 YVRETYRVAIGERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKT 268 (344)
T ss_dssp HHHHHHCEECCHHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHhCcccCHHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99876542211 1111111 1
Q ss_pred C----CC-h-HHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHc
Q psy3431 257 H----GD-A-HFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 299 (549)
Q Consensus 257 ~----~~-i-~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~ 299 (549)
. .+ + +.| |++.|++.| +.++..+.||+++||+||+++|+.++
T Consensus 269 ~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 269 PPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp CHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred CchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence 1 01 1 233 899999999 45677788999999999999998654
No 17
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.96 E-value=1.1e-29 Score=224.79 Aligned_cols=151 Identities=60% Similarity=0.989 Sum_probs=145.5
Q ss_pred EEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCCCCCCC
Q psy3431 311 LVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVP 390 (549)
Q Consensus 311 ~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~~~g~~ 390 (549)
+.|++|++||+++.+|.|.+|||+|++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|+.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHH
Q psy3431 391 KIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLE 461 (549)
Q Consensus 391 ~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE 461 (549)
+|+|+|.+|.||+|+|++.+..+|+...++|.+....||+++++++++++++|..+|+..+++.++||+||
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999886779999999999999999999999999999999875
No 18
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.91 E-value=8.9e-24 Score=181.66 Aligned_cols=119 Identities=62% Similarity=0.949 Sum_probs=109.7
Q ss_pred cceeEEEEeccccceEEeeCCeeeEEEccCCCCCcccceeeeeccCCCCcEEEEEeecCcccccCCceeeEEEecCCCCC
Q psy3431 306 IQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPA 385 (549)
Q Consensus 306 ~~~~~~~d~~~~~igi~~~~~~~~~li~~~~~lp~~~~~~~~~~~~~q~~~~i~iy~ge~~~~~~~~~ig~~~i~~i~~~ 385 (549)
.+++.+.|++|++||+++.+|.|.+|||||+++|++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|+.
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEeCCCccEEEEEEecCCCCceeEEEecC
Q psy3431 386 PRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKND 424 (549)
Q Consensus 386 ~~g~~~i~v~~~~d~~g~l~v~~~~~~t~~~~~i~i~~~ 424 (549)
|+|.++|+|+|++|.||+|+|++.++.||++..++|++.
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~ 132 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS 132 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecC
Confidence 999999999999999999999999999999999999876
No 19
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.88 E-value=1.5e-23 Score=211.85 Aligned_cols=133 Identities=20% Similarity=0.138 Sum_probs=103.1
Q ss_pred eeCHHHHHHHHHHHHHHHHHHHhCCCcceEE--EEecCCCCHHHHHHHHHHHHHc--------C------CceeEeecch
Q psy3431 110 TFAPEEISSMVLTKMKETAEAYLGHSVRDAV--ITVPAYFNDAQRQATKDAGAIA--------G------LNVMRIVNEP 173 (549)
Q Consensus 110 ~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~v--itVPa~f~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep 173 (549)
.+.++...++++..|+..++...+.+ .++| |+||++|+..||+++++|+..+ | ++.+.+++||
T Consensus 94 ~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep 172 (346)
T 2fsj_A 94 RLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQG 172 (346)
T ss_dssp CTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETT
T ss_pred cccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccH
Confidence 34557777788877776652222333 5699 9999999999999999998776 4 3568999999
Q ss_pred hHHHHhhhcccCCC-CCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHHHh
Q psy3431 174 TAAALAYGLDKNLK-GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR 245 (549)
Q Consensus 174 ~Aaal~y~~~~~~~-~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~~~ 245 (549)
+|||++|....... ...+++|||+||||||++++++.++ . .+.+..++..+||.+|++.|.+++.+++..
T Consensus 173 ~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g-~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g~ 243 (346)
T 2fsj_A 173 VGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDM-E-PVVELSFSLQIGVGDAISALSRKIAKETGF 243 (346)
T ss_dssp HHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTT-E-ECGGGCEEESCCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCC-E-EEeecCCCcchhHHHHHHHHHHHHHHHhCC
Confidence 99999882221122 3478999999999999999998777 5 556556778999999999999999988765
No 20
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.78 E-value=8.2e-19 Score=171.52 Aligned_cols=168 Identities=24% Similarity=0.365 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHHHHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEE
Q psy3431 114 EEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL 193 (549)
Q Consensus 114 ~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vl 193 (549)
.+....+|+++++.++...+.....+++|+|++|+..+|++++++++.+|+++..++.||+|++++|+.. ..+
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~-------~~~ 142 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN-------DGI 142 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS-------SEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC-------CEE
Confidence 4556788899999999888888899999999999999999999999999999999999999999988753 259
Q ss_pred EEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH------HHHHhccc--------------ccc--
Q psy3431 194 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA------EEFKRKCR--------------SAS-- 251 (549)
Q Consensus 194 v~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~------~~~~~~~~--------------~~~-- 251 (549)
|+|+||||++++++. .+ ... ......+||.+||+.|.+++. ++++.++. ..+
T Consensus 143 viDiGggst~~~~~~--~g-~~~---~~~~~~~Gg~~~~~~l~~~l~~~~~~ae~~k~~~~~~~~~~~~~~~~~~~i~~~ 216 (272)
T 3h1q_A 143 VVDIGGGTTGIAVIE--KG-KIT---ATFDEPTGGTHLSLVLAGSYKIPFEEAETIKKDFSRHREIMRVVRPVIEKMALI 216 (272)
T ss_dssp EEEECSSCEEEEEEE--TT-EEE---EECCBSCCHHHHHHHHHHHHTCCHHHHHHHHHSSTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCcEEEEEEE--CC-EEE---EEecCCCcHHHHHHHHHHHhCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999986 34 322 335689999999999998873 22222211 000
Q ss_pred --ccCCCCCChHHH-----------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHH
Q psy3431 252 --DVGDHHGDAHFV-----------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQA 295 (549)
Q Consensus 252 --e~~K~~~~i~~V-----------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a 295 (549)
+.++...+++.| +++.+++.| +.++..+.||++++|+|||++|
T Consensus 217 i~~~l~~~~~~~~ivL~GG~a~~~~l~~~l~~~l-~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 217 VKEVIKNYDQTLPVYVVGGTAYLTGFSEEFSRFL-GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHTTTSCSSCCEEEESGGGGSTTHHHHHHHHH-SSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHHHHhcCCCCEEEEECCccchhhHHHHHHHHh-CCCccccCChHHHHHHHHHhcC
Confidence 001111124444 899999999 6778889999999999999864
No 21
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.74 E-value=8.5e-18 Score=171.90 Aligned_cols=186 Identities=15% Similarity=0.177 Sum_probs=119.2
Q ss_pred CEEEEEcCccceEEEEEECCeEE-EEeCCCCCcccee-EEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChH
Q psy3431 2 PAIGIDLGTTYSCVAVFQQGKVE-IIANDQGNRTTPS-YVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPK 79 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~g~~~-ii~~~~g~~~~Ps-~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~ 79 (549)
..|+||+||+++++++..++.|. ++++--|....++ .+.+.....++|++|.... .. ..+
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~~------------ 67 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LTL------------ 67 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----TS--EEE------------
T ss_pred ceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcC----cc--cce------------
Confidence 57999999999999987665543 3333222222221 1122223567888886541 00 000
Q ss_pred HHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCC--cceEEEEecCCCCHHHHHHHHH
Q psy3431 80 IQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHS--VRDAVITVPAYFNDAQRQATKD 157 (549)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~--~~~~vitVPa~f~~~qr~~l~~ 157 (549)
.+|+. .| .... -+.+..+++++.. +.++.. ...++||+|++++..+|+++.+
T Consensus 68 ------~~Pi~--------------~G--~i~d-~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~e 121 (375)
T 2fxu_A 68 ------KYPIE--------------HG--IITN-WDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMTQ 121 (375)
T ss_dssp ------ECSEE--------------TT--EECC-HHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHHH
T ss_pred ------ecccc--------------CC--cccC-HHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHHHH
Confidence 11211 11 1111 1233444444432 233322 3469999999999999998887
Q ss_pred HH-HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHH
Q psy3431 158 AG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLV 236 (549)
Q Consensus 158 Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~ 236 (549)
++ +.+|++.+.+++||+|||++|+. .+.+|+|+|+||||++.+. +| . .+........+||++||+.|.
T Consensus 122 ~~fe~~g~~~~~~~~e~~aaa~a~g~-------~~~lVvDiG~gtt~v~~v~--~G-~-~~~~~~~~~~~GG~~lt~~l~ 190 (375)
T 2fxu_A 122 IMFETFNVPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVTHNVPIY--EG-Y-ALPHAIMRLDLAGRDLTDYLM 190 (375)
T ss_dssp HHHHTTCCSEEEEEEHHHHHHHHTTC-------SSEEEEEECSSCEEEEEEE--TT-E-ECGGGCEEESCCHHHHHHHHH
T ss_pred HHHHhcCcceEEEccchheeeeecCC-------CeEEEEEcCCCceEEeEeE--CC-E-EeccceEEeccCHHHHHHHHH
Confidence 65 77899999999999999999875 3679999999999987764 45 3 233334457899999999999
Q ss_pred HHHHHH
Q psy3431 237 SHLAEE 242 (549)
Q Consensus 237 ~~l~~~ 242 (549)
++|..+
T Consensus 191 ~~l~~~ 196 (375)
T 2fxu_A 191 KILTER 196 (375)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 998754
No 22
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.73 E-value=1.1e-18 Score=179.06 Aligned_cols=200 Identities=16% Similarity=0.189 Sum_probs=133.1
Q ss_pred EEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCCceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCChHHHh
Q psy3431 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDDPKIQQ 82 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~~ 82 (549)
++|||+||+++++++.++|.+.+ +..|...+||.+. +.....++..+...+|+++++. ..
T Consensus 15 ~vgiDiGt~~i~~~~~~~~~~~i--~~~g~~~~ps~~~------------~~g~i~d~~~~~~~ik~~~~~~------~~ 74 (377)
T 2ych_A 15 ALGLEIGASALKLVEVSGNPPAL--KALASRPTPPGLL------------MEGMVAEPAALAQEIKELLLEA------RT 74 (377)
T ss_dssp CEEEEECSSEEEEEEEETTTTEE--EEEEEEECCTTSE------------ETTEESCHHHHHHHHHHHHHHH------TC
T ss_pred eEEEEeCCCeEEEEEEeCCceEE--EEEEeEECCCCcc------------cCCCcCCHHHHHHHHHHHHHHc------CC
Confidence 78999999999999887666443 2234445555321 1223346777888888888751 00
Q ss_pred hcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCCCCHHH-----------
Q psy3431 83 DMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQ----------- 151 (549)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~f~~~q----------- 151 (549)
..+.. .+.-.+...+...... ..++++++... ++..++.+++.++.+++|.+|. .+.+
T Consensus 75 ~~~~v---~~~i~~~~~~~~~~~~--~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~~v 143 (377)
T 2ych_A 75 RKRYV---VTALSNLAVILRPIQV--PKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQVQV 143 (377)
T ss_dssp CCCEE---EEEECGGGCEEEEEEE--ECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEEEE
T ss_pred CcceE---EEEecCCcEEEEEEEC--CCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCcceeEE
Confidence 01111 1111221111111111 35778887653 3446777888899999999983 2222
Q ss_pred ---------HHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecC
Q psy3431 152 ---------RQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAG 222 (549)
Q Consensus 152 ---------r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~ 222 (549)
.+++++|++.|||++..++.||+|||++|+.......+..++|+|+||||||+++++. | .+. ..+
T Consensus 144 ~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~--g-~~~---~~~ 217 (377)
T 2ych_A 144 MVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRG--D-KPL---AVR 217 (377)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEET--T-EEE---EEE
T ss_pred EEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEEC--C-EEE---EEE
Confidence 3889999999999999999999999999875433234677999999999999999973 4 322 234
Q ss_pred CCCCCcchHHHHHHHHH
Q psy3431 223 DTHLGGEDFDNRLVSHL 239 (549)
Q Consensus 223 d~~lGG~~iD~~l~~~l 239 (549)
+..+||.+||+.|.+.+
T Consensus 218 ~~~~GG~~i~~~i~~~~ 234 (377)
T 2ych_A 218 VLTLSGKDFTEAIARSF 234 (377)
T ss_dssp EESCSHHHHHHHHHHHT
T ss_pred eeechHHHHHHHHHHHh
Confidence 57899999999998743
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.73 E-value=2.9e-18 Score=171.58 Aligned_cols=178 Identities=17% Similarity=0.205 Sum_probs=116.2
Q ss_pred eeeCHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecCC-CCHH--HH--HHHHH--------H----HHHcCCceeEeec
Q psy3431 109 KTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAY-FNDA--QR--QATKD--------A----GAIAGLNVMRIVN 171 (549)
Q Consensus 109 ~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~vitVPa~-f~~~--qr--~~l~~--------A----a~~AGl~~~~li~ 171 (549)
..+++..+++.+ ..|+. + .......++|+++|.. |... || .++.+ + ++.+++..+.+++
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~--~~~~~~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-S--GLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-H--SCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-c--CCCCceEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 467777777654 44442 1 1111224699999987 6531 21 11211 1 2345567899999
Q ss_pred chhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH-----------
Q psy3431 172 EPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA----------- 240 (549)
Q Consensus 172 Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~----------- 240 (549)
||.||+++|... ...+..++|+|+||||+|+++++ ++ .+.+....++..+||.+||+.|.+++.
T Consensus 148 e~~aa~~~~~~~--~~~~~~~~vvDiGggttd~~v~~--~g-~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~~i~~~~a 222 (320)
T 2zgy_A 148 ESIPAGYEVLQE--LDELDSLLIIDLGGTTLDISQVM--GK-LSGISKIYGDSSLGVSLVTSAVKDALSLARTKGSSYLA 222 (320)
T ss_dssp SSHHHHHHHHHH--SCTTCEEEEEEECSSCEEEEEEE--GG-GCCEEEEEEECSCCTHHHHHHHHHHTTCCSBGGGHHHH
T ss_pred CcHHHHHhhhcc--ccCCCCEEEEEcCCCeEEEEEEe--CC-eeEEeeecCCccccHHHHHHHHHHHHHHcCCCCCHHHH
Confidence 999999988743 23567999999999999999998 34 445666677789999999999999983
Q ss_pred HHH-Hhccc--------------------------c----ccccCCCCCChHHH---------HHHHHHhhhCCC--CCC
Q psy3431 241 EEF-KRKCR--------------------------S----ASDVGDHHGDAHFV---------VQSLLQNFFCGK--SLN 278 (549)
Q Consensus 241 ~~~-~~~~~--------------------------~----~~e~~K~~~~i~~V---------i~~~l~~~f~~~--~~~ 278 (549)
+++ +.... + ..+.++...+++.| +++.|++.|+.. ++.
T Consensus 223 e~~lk~~~~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~~~~~~vvl~GGga~ll~~~l~~~~~~~~~~~~ 302 (320)
T 2zgy_A 223 DDIIIHRKDNNYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEFSGYTHVMVIGGGAELICDAVKKHTQIRDERFF 302 (320)
T ss_dssp HHHHHTTTCHHHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEESTTHHHHHHHHHHTSCCCGGGEE
T ss_pred HHHHHHhhhhhcccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEECChHHHHHHHHHHHhCCCCCcee
Confidence 222 11100 0 00000011233333 888899988532 467
Q ss_pred CCCChhhHHHccHHHHH
Q psy3431 279 LSINPDEAVAYGAAVQA 295 (549)
Q Consensus 279 ~~~~~~eava~Gaa~~a 295 (549)
...||++|+|+||++++
T Consensus 303 ~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 303 KTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCSCGGGHHHHHHHHHH
T ss_pred eCCCcHHHHHHHHHHhc
Confidence 78999999999999875
No 24
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.69 E-value=1.2e-16 Score=133.45 Aligned_cols=101 Identities=43% Similarity=0.841 Sum_probs=75.5
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhhhc--cCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Q psy3431 449 KQKERISARNNLEAYVFNVKQALDDA--GNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKM 526 (549)
Q Consensus 449 ~~~~~~~a~N~LE~~iy~~r~~l~~~--~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~ 526 (549)
++|++.++||+||+|||.++..|.+. ..++++++++.|...++++.+||+.+.+++.++|+.++++|++.+.||..|+
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~ 82 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL 82 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999763 2789999999999999999999999888899999999999999999999999
Q ss_pred hcCCCCCCCCCC-------C-CCCCCCCCCC
Q psy3431 527 HGGAGGASAGDM-------P-RGGPTVEEVD 549 (549)
Q Consensus 527 ~e~~~~~~~~~~-------~-~~~~~~~~~~ 549 (549)
++.+|+++.+|| + ..||+|||||
T Consensus 83 y~~~~~~~~~~~~~~~~~~~~~~gp~~eevd 113 (113)
T 3lof_A 83 YQGAGGPGPGGFGAQGPKGGSGSGPTIEEVD 113 (113)
T ss_dssp HHC----------------------------
T ss_pred HHhccCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 986442222222 1 2489999998
No 25
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.69 E-value=6.2e-17 Score=168.13 Aligned_cols=104 Identities=16% Similarity=0.129 Sum_probs=82.6
Q ss_pred cceEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHh-hhcccCCCCCceEEEEEcCCCceeeeEEEeeCCc
Q psy3431 136 VRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALA-YGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGA 213 (549)
Q Consensus 136 ~~~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~-y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~ 213 (549)
...++||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |........+.+.+|+|+|+||||++++. .|
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~--~G- 183 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVA--EG- 183 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEE--TT-
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeE--CC-
Confidence 457999999999999999999999 88999999999999999987 42111101122679999999999999985 34
Q ss_pred EEEEEEecCCCCCCcchHHHHHHHHHHHHH
Q psy3431 214 LFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 243 (549)
Q Consensus 214 ~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~ 243 (549)
. .+.....+..+||++||+.|.++|.+++
T Consensus 184 ~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~ 212 (418)
T 1k8k_A 184 Y-VIGSCIKHIPIAGRDITYFIQQLLRDRE 212 (418)
T ss_dssp E-ECGGGCEEESCSHHHHHHHHHHHHHTTC
T ss_pred E-EcccceEEEeCcHHHHHHHHHHHHHhcC
Confidence 3 2333335578999999999999988654
No 26
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.55 E-value=5.2e-15 Score=144.72 Aligned_cols=131 Identities=15% Similarity=0.084 Sum_probs=96.6
Q ss_pred HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHH
Q psy3431 161 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240 (549)
Q Consensus 161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~ 240 (549)
.++...+..|+||+|+++++.+..+ ....|+|+|||+++++++. .+| .++.....++...|+.+|++.+.++|.
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~~----~~~~vl~lgG~~~~~~~~~-~~g-~~~~~~~~~~~~~g~G~f~d~~a~~l~ 141 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFIIP----ETRTIIDIGGQDAKVLKLD-NNG-RLLNFLMNDKCAAGTGRFLDVMAKIIE 141 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHST----TCCEEEEECSSCEEEEEEC-TTS-CEEEEEEECSCSTTSHHHHHHHHHHHT
T ss_pred HHhhCCCcccchHHHHHHHHHHhCC----CCCeEEEEcCCCceEEEEE-ecC-ceEEEEeCCCcCcchhhHHHHHHHHhc
Confidence 4667788999999999988766543 3457899999999999885 455 788888888899999999999998876
Q ss_pred HHHHhccccccccCC----------------------CCC-------------------------ChHHH----------
Q psy3431 241 EEFKRKCRSASDVGD----------------------HHG-------------------------DAHFV---------- 263 (549)
Q Consensus 241 ~~~~~~~~~~~e~~K----------------------~~~-------------------------~i~~V---------- 263 (549)
-.+..... ....++ ... .++.|
T Consensus 142 ~~~~~~~~-~~~~a~~~~~i~~~~~~f~~s~~~~~~~~~~~~~di~a~~~~~v~~~l~~~~~~~~~~~~vvl~GGva~n~ 220 (276)
T 4ehu_A 142 VDVSELGS-ISMNSQNEVSISSTCTVFAESEVISHLSENAKIEDIVAGIHTSVAKRVSSLVKRIGVQRNVVMVGGVARNS 220 (276)
T ss_dssp CCGGGHHH-HHTTCSSCCCCCCCSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHCCCSSEEEESGGGGCH
T ss_pred cChhhhHH-HHhcCCCCCCcCCccchhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHhcccCCeEEEecCccchH
Confidence 44432111 011111 001 11111
Q ss_pred -HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHc
Q psy3431 264 -VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 299 (549)
Q Consensus 264 -i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~ 299 (549)
|++.+++.| +.++..+.+|++++|+|||++|....
T Consensus 221 ~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 221 GIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 999999999 67888899999999999999997544
No 27
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.53 E-value=9.5e-15 Score=122.98 Aligned_cols=100 Identities=39% Similarity=0.704 Sum_probs=72.4
Q ss_pred HHHHHHHhhhHHHHHHHHHHHhhh--ccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHh
Q psy3431 450 QKERISARNNLEAYVFNVKQALDD--AGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMH 527 (549)
Q Consensus 450 ~~~~~~a~N~LE~~iy~~r~~l~~--~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~ 527 (549)
+|++.++||+||+|||.++..|.+ ....+++++++.|...+.++.+||+++.+++.++|+.++++|++++.||..|++
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y 92 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY 92 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999976 237899999999999999999999976678999999999999999999999998
Q ss_pred cCCCCCCCC------CCCCCCCCCCCCC
Q psy3431 528 GGAGGASAG------DMPRGGPTVEEVD 549 (549)
Q Consensus 528 e~~~~~~~~------~~~~~~~~~~~~~ 549 (549)
..+|+..++ |++..||+|+|||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~ee~d 120 (120)
T 2p32_A 93 QSAGGAPPGAAPGGAAGGAGGPTIEEVD 120 (120)
T ss_dssp CC--------------------------
T ss_pred HhccCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 643321111 1223479999998
No 28
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.46 E-value=5.9e-14 Score=117.17 Aligned_cols=96 Identities=36% Similarity=0.754 Sum_probs=69.8
Q ss_pred HHHHhhhHHHHHHHHHHHhhh--ccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy3431 453 RISARNNLEAYVFNVKQALDD--AGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGA 530 (549)
Q Consensus 453 ~~~a~N~LE~~iy~~r~~l~~--~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~ 530 (549)
+.++||+||+|||.++..|.+ ....+++++++.|...+.++.+||+++.+++.++|++++++|++++.||..|+++..
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~~ 81 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 81 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 467899999999999999973 237899999999999999999999865557889999999999999999999998653
Q ss_pred CCCCCCCC--------------CCCCCCCCCCC
Q psy3431 531 GGASAGDM--------------PRGGPTVEEVD 549 (549)
Q Consensus 531 ~~~~~~~~--------------~~~~~~~~~~~ 549 (549)
++ ++++| +..||+|+|||
T Consensus 82 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ee~d 113 (113)
T 1ud0_A 82 GG-MPGGMPGGFPGGGAPPSGGASSGPTIEEVD 113 (113)
T ss_dssp CC-CCCC--------------------------
T ss_pred cC-CCCCCCCCCCCcccCCCCCCCCCCCcccCC
Confidence 32 22221 12478999997
No 29
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.40 E-value=1e-12 Score=135.36 Aligned_cols=83 Identities=10% Similarity=0.003 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcc
Q psy3431 150 AQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGE 229 (549)
Q Consensus 150 ~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~ 229 (549)
...+.+.+|++.|||++..++.||.|||++|..... .+..++++|+||||||+++++ +| .+.. .++..+||.
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~--~~~gv~vvDiGggttdisi~~--~g-~~~~---~~~i~~GG~ 239 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE--KDRGVVVVNLGYNFTGLIAYK--NG-VPIK---ISYVPVGMK 239 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH--HHHCEEEEEECSSSEEEEEEE--TT-EEEE---EEEESCCHH
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc--ccCCEEEEEECCCcEEEEEEE--CC-EEEE---EEecccHHH
Confidence 456789999999999999999999999998864422 456799999999999999987 45 4332 335789999
Q ss_pred hHHHHHHHHHH
Q psy3431 230 DFDNRLVSHLA 240 (549)
Q Consensus 230 ~iD~~l~~~l~ 240 (549)
+||+.|...+.
T Consensus 240 ~it~dIa~~l~ 250 (419)
T 4a2a_A 240 HVIKDVSAVLD 250 (419)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHC
Confidence 99999998664
No 30
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.38 E-value=4.8e-14 Score=144.80 Aligned_cols=95 Identities=16% Similarity=0.210 Sum_probs=35.4
Q ss_pred ceEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEE
Q psy3431 137 RDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALF 215 (549)
Q Consensus 137 ~~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~ 215 (549)
..++||+|+.++..+|+++.+++ +.+|++.+.+++||.||+++++. .+.+|+|+|+|||+++.+. .| ..
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~-------~~~lVVDiG~g~T~v~pv~--~G-~~ 174 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL-------LTGVVVDSGDGVTHICPVY--EG-FS 174 (394)
T ss_dssp --------------------------------------------------------CCEEEECSSCEEEECEE--TT-EE
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC-------ceEEEEEcCCCceEeeeeE--CC-EE
Confidence 45899999999999999998865 77899999999999999988875 3569999999999998774 34 22
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHHHH
Q psy3431 216 EVRSTAGDTHLGGEDFDNRLVSHLAEE 242 (549)
Q Consensus 216 ~v~~~~~d~~lGG~~iD~~l~~~l~~~ 242 (549)
+........+||+++|+.|.++|..+
T Consensus 175 -~~~~~~~~~~GG~~lt~~l~~~l~~~ 200 (394)
T 1k8k_B 175 -LPHLTRRLDIAGRDITRYLIKLLLLR 200 (394)
T ss_dssp -CSTTCEEESCCHHHHHHHHHHHHHHT
T ss_pred -cccceEEeeccHHHHHHHHHHHHHhc
Confidence 21112336899999999999998764
No 31
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.36 E-value=9.9e-13 Score=132.52 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=78.2
Q ss_pred ceEEEEecCCCCHHHH-HHHHHHHHHcCC------------ceeEeecchhHHHHhhhcccCCC----CCceEEEEEcCC
Q psy3431 137 RDAVITVPAYFNDAQR-QATKDAGAIAGL------------NVMRIVNEPTAAALAYGLDKNLK----GERNVLIFDLGG 199 (549)
Q Consensus 137 ~~~vitVPa~f~~~qr-~~l~~Aa~~AGl------------~~~~li~Ep~Aaal~y~~~~~~~----~~~~vlv~D~Gg 199 (549)
..+++.+|..+...+| +++++++..++- ..+.+++||.||+++++...... .+..++|+|+||
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 4789999999888887 589999886543 57899999999999997654211 478899999999
Q ss_pred CceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHHH
Q psy3431 200 GTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 243 (549)
Q Consensus 200 gt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~ 243 (549)
||+|++++. ++ .+ +...++...+||..+++.+.+++.+++
T Consensus 194 gTtd~~v~~--~~-~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~ 233 (355)
T 3js6_A 194 GTTIIDTYQ--NM-KR-VEEESFVINKGTIDFYKRIASHVSKKS 233 (355)
T ss_dssp SCEEEEEEE--TT-EE-CGGGCEEESCCHHHHHHHHHHHTC---
T ss_pred CcEEEEEEc--CC-EE-ccccccCcchHHHHHHHHHHHHHHHhc
Confidence 999999993 44 22 111233467999999999999998874
No 32
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.19 E-value=3.4e-12 Score=127.54 Aligned_cols=156 Identities=12% Similarity=0.070 Sum_probs=106.4
Q ss_pred cceEEEEecCCCCH--HHHHHHHHHHHHc--------C------CceeEeecchhHHHHhhhcccCCCCCceEEEEEcCC
Q psy3431 136 VRDAVITVPAYFND--AQRQATKDAGAIA--------G------LNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGG 199 (549)
Q Consensus 136 ~~~~vitVPa~f~~--~qr~~l~~Aa~~A--------G------l~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gg 199 (549)
...+++++|..+.. .+|+.+++....- | +..+.+++||.+|.+.+. .......++|+|+||
T Consensus 105 ~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~~~~~~~v~vvDiGg 181 (329)
T 4apw_A 105 KVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---ENFKNKNVAVIDFGG 181 (329)
T ss_dssp EEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---CCCTTCEEEEEEECS
T ss_pred eEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---hhhccCCEEEEEeCC
Confidence 35789999976653 4677777766621 1 245788999998886652 123578999999999
Q ss_pred CceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHH-HHHhccc-cccccCCC---------------------
Q psy3431 200 GTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE-EFKRKCR-SASDVGDH--------------------- 256 (549)
Q Consensus 200 gt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~-~~~~~~~-~~~e~~K~--------------------- 256 (549)
||+|++++. ++ .+ +....+...+||..+++.+.+++.. ++....+ ..+|++|.
T Consensus 182 gTtd~~v~~--~g-~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~g~~i~~~~~e~i~~~g~~~~g~~~~~~~~~~i~~~ 257 (329)
T 4apw_A 182 LNMGFSLYR--NC-VV-NPSERFIEEHGVKDLIIRVGDALTDLNNGNLITNEQAESALNNGYMKKGGEIDTESSTVIKKV 257 (329)
T ss_dssp SCEEEEEEE--TT-EE-CGGGCEEESCCHHHHHHHHHTSSSSCSSCSCTTSBTTTTCSSSCSSCEECTTCCSTTHHHHHH
T ss_pred CcEEEEEEE--CC-EE-eeccccchhhHHHHHHHHHHHHHHhhccCCCCCHHHHHHHHhcCCcccCCcchhHHHHHHHHH
Confidence 999999998 34 32 2223345779999999999998887 5544333 34444430
Q ss_pred ------------------CCChHHH---------HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHHc
Q psy3431 257 ------------------HGDAHFV---------VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 299 (549)
Q Consensus 257 ------------------~~~i~~V---------i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l~ 299 (549)
++.++.| +.+.|++.|+ ..+....||..|+|+|+..++....
T Consensus 258 ~~e~~~~I~~~i~~~~~~~~~~~~IvltGGGA~l~~~~l~~~~~-~~v~v~~~P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 258 KEKFLKDAIKLIEKRGFKLDQLDSLIFIGGTTQKLKEQISKTYP-NNSIITNNSQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp HHHHHHHHHHHHHHHTCCTTSCSEEEEESTTHHHHHHHHHHHST-TCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEEECChHHHHHHHHHHHcC-CCCEecCCChhhHHHHHHHHHhhhh
Confidence 1111111 6777777774 3456678999999999998876543
No 33
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.04 E-value=6.9e-10 Score=115.60 Aligned_cols=178 Identities=14% Similarity=0.168 Sum_probs=118.3
Q ss_pred CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeCC----ceEEcHhhHHhhhcCCCchHHHhHHhhCCCCCC
Q psy3431 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT----ERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFDD 77 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~----~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~ 77 (549)
..|+||+||.++++++..++.|. ..+||+|+.... ..++|++|.... +.+ .
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~--------~v~PSvVg~~~~~~~~~~~vG~e~~~~~---r~~--l------------ 78 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQ--------SILPSVYGKYTADEGNKKIFSEQSIGIP---RKD--Y------------ 78 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCS--------EEEESEEEEESSCSSCCEECCTTGGGSC---CTT--E------------
T ss_pred CeEEEECCCcEEEEEECCCCCee--------eecCceeEEeccCCCccEEEecHHHhcC---cCc--e------------
Confidence 46899999999999987655442 246999988543 467787532210 000 0
Q ss_pred hHHHhhcccCCeEEeecCCCceEEEEEcCceeeeCHHHHHHHHHHHHHHHHHHHhCC--Ccc-eEEEEecCCCCHHHHHH
Q psy3431 78 PKIQQDMKHWPFTVVNDRSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGH--SVR-DAVITVPAYFNDAQRQA 154 (549)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~--~~~-~~vitVPa~f~~~qr~~ 154 (549)
.-.+|+. .| .+.-=+.+..+++|+... .++. ... .++||.|+......|+.
T Consensus 79 ------~l~~Pi~--------------~G---vI~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re~ 132 (498)
T 3qb0_A 79 ------ELKPIIE--------------NG---LVIDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRKK 132 (498)
T ss_dssp ------EEEESEE--------------TT---EESCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHHH
T ss_pred ------EEeccCc--------------CC---EEccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHHH
Confidence 0001110 12 222234445555555432 2332 223 58999999999999999
Q ss_pred HHHHH-HHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHH
Q psy3431 155 TKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDN 233 (549)
Q Consensus 155 l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~ 233 (549)
+.+.+ +.+|++.+.++.+|.+|+++++.. +-||+|+|+|+++++.+. .| .. +.....-..+||+++|+
T Consensus 133 ~~eilFE~f~vpav~l~~~~vlalya~G~~-------tglVVDiG~g~T~vvPI~--~G-~~-l~~ai~rl~vgG~~lt~ 201 (498)
T 3qb0_A 133 SLEVLLEGMQFEACYLAPTSTCVSFAAGRP-------NCLVVDIGHDTCSVSPIV--DG-MT-LSKSTRRNFIAGKFINH 201 (498)
T ss_dssp HHHHHHTTSCCSEEEEEEHHHHHHHHHTCS-------SEEEEEECSSCEEEEEEE--TT-EE-CGGGCEEESCSHHHHHH
T ss_pred HHHHHHhhcCCCeEeecchHHHHHHHcCCC-------eEEEEEcCCCcEEEEEEe--CC-EE-ccccceeccccHHHHHH
Confidence 99975 779999999999999999887652 249999999999999985 34 11 11111125799999999
Q ss_pred HHHHHHHH
Q psy3431 234 RLVSHLAE 241 (549)
Q Consensus 234 ~l~~~l~~ 241 (549)
.|.++|.+
T Consensus 202 ~L~~lL~~ 209 (498)
T 3qb0_A 202 LIKKALEP 209 (498)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHHh
Confidence 99999864
No 34
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.83 E-value=5.9e-09 Score=107.36 Aligned_cols=103 Identities=17% Similarity=0.146 Sum_probs=78.7
Q ss_pred ceEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHhhhcccCCC-CCceEEEEEcCCCceeeeEEEeeCCcE
Q psy3431 137 RDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLK-GERNVLIFDLGGGTFDVSILSIDEGAL 214 (549)
Q Consensus 137 ~~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~-~~~~vlv~D~Gggt~dvsv~~~~~~~~ 214 (549)
..+++|.|+..+...|+.+.+.+ +.+|++.+.++.+|.+|+++.+...... ...+-||+|+|+|+|+++.+. .| .
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~--~G-~ 200 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVA--EG-Y 200 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEE--TT-E
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEE--CC-E
Confidence 47899999999999999999988 6899999999999999998887542211 145689999999999999984 24 1
Q ss_pred EEEEEecCCCCCCcchHHHHHHHHHHHHH
Q psy3431 215 FEVRSTAGDTHLGGEDFDNRLVSHLAEEF 243 (549)
Q Consensus 215 ~~v~~~~~d~~lGG~~iD~~l~~~l~~~~ 243 (549)
. +........+||+++|+.|.++|..+.
T Consensus 201 ~-l~~~~~rl~~gG~~lt~~L~~lL~~~~ 228 (427)
T 3dwl_A 201 V-IGSSIKTMPLAGRDVTYFVQSLLRDRN 228 (427)
T ss_dssp E-CGGGCEEESCCHHHHHHHHHHTTC---
T ss_pred E-ehhhheeccccHHHHHHHHHHHHHHcC
Confidence 1 111111257999999999999887665
No 35
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=98.59 E-value=5.4e-07 Score=97.47 Aligned_cols=118 Identities=17% Similarity=0.263 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHH-HHHhCCCcc-----eEEEEecCCCCHHHHHHHHHHH-HHcCCceeEeecchhHHHHhhhcccC
Q psy3431 113 PEEISSMVLTKMKETA-EAYLGHSVR-----DAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKN 185 (549)
Q Consensus 113 ~~~v~~~~L~~l~~~a-~~~~~~~~~-----~~vitVPa~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~ 185 (549)
..+.... +..|++++ ...++-... .+++|.|..++...|+.|.+.+ +..|++.+.++.++.+|++++|..
T Consensus 170 ~~~~wdd-~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~-- 246 (593)
T 4fo0_A 170 LTAVLAD-IEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS-- 246 (593)
T ss_dssp HHHHHHH-HHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS--
T ss_pred hhcCHHH-HHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC--
Confidence 3444433 33444444 345665443 4999999999999999887765 456999999999999999887653
Q ss_pred CCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHH
Q psy3431 186 LKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242 (549)
Q Consensus 186 ~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~ 242 (549)
+-+|+|+|.+.|.|+-|. +| .. +....-...+||.++++.|.++|..+
T Consensus 247 -----tglVVDiG~~~T~v~PV~--dG-~~-l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 247 -----STCIVDVGDQKTSVCCVE--DG-VS-HRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp -----EEEEEEECSSCEEEEEEE--SS-CB-CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred -----ceEEEEeCCCceeeeeeE--CC-EE-ehhheEEecccHHHHHHHHHHHHHhc
Confidence 569999999999988775 23 11 11111125799999999999888754
No 36
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=98.00 E-value=1.9e-05 Score=83.36 Aligned_cols=96 Identities=16% Similarity=0.300 Sum_probs=77.4
Q ss_pred ceEEEEecCCCCHHHHHHHHHHHH-HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEE
Q psy3431 137 RDAVITVPAYFNDAQRQATKDAGA-IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALF 215 (549)
Q Consensus 137 ~~~vitVPa~f~~~qr~~l~~Aa~-~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~ 215 (549)
..+++|.|+.++...|+.|.+.+- ..|++.+.++.+|.+|++++|. ..+-||+|+|+|+|+++.+. .| .
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl------~ttGLVVDiG~g~T~VvPV~--eG-~- 291 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI------STSTCVVNIGAAETRIACVD--EG-T- 291 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC------SSCEEEEEECSSCEEEEEEE--TT-E-
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC------CCceEEEcCCCceEEEEEEe--CC-E-
Confidence 469999999999999999999885 5899999999999999987764 24579999999999999884 34 1
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHHHH
Q psy3431 216 EVRSTAGDTHLGGEDFDNRLVSHLAEE 242 (549)
Q Consensus 216 ~v~~~~~d~~lGG~~iD~~l~~~l~~~ 242 (549)
-+.....-..+||++++..|.++|..+
T Consensus 292 vl~~ai~rL~iGG~dLT~yL~kLL~~r 318 (655)
T 4am6_A 292 VLEHSAITLDYGGDDITRLFALFLLQS 318 (655)
T ss_dssp ECGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred EEhhheeeecchHHHHHHHHHHHHHHc
Confidence 111111125799999999999998865
No 37
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.54 E-value=0.004 Score=59.69 Aligned_cols=34 Identities=26% Similarity=0.162 Sum_probs=27.6
Q ss_pred HHHHHHhhhCCCCCCCCCChhhHHHccHHHHHHHH
Q psy3431 264 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAIL 298 (549)
Q Consensus 264 i~~~l~~~f~~~~~~~~~~~~eava~Gaa~~a~~l 298 (549)
+++.+.+.+ +.++..+.+++.+.|+|||++|...
T Consensus 224 ~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 224 VRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence 778888888 5667777778889999999999764
No 38
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=97.29 E-value=0.0014 Score=64.23 Aligned_cols=77 Identities=18% Similarity=0.154 Sum_probs=49.7
Q ss_pred HHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHH
Q psy3431 153 QATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFD 232 (549)
Q Consensus 153 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD 232 (549)
..+..+-+..|+++-.|=.|.+|...+.+...........+|+|+|||||.+++.+ ++ .+. . ..+-.+|+..+.
T Consensus 101 ~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~-~~~--~-~~Sl~~G~v~l~ 174 (315)
T 1t6c_A 101 EFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GY-KVR--E-VISLPIGIVNLT 174 (315)
T ss_dssp HHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TT-EEE--E-EEEECCCHHHHH
T ss_pred HHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CC-cee--e-EEEEeccHHHHH
Confidence 34455555789987655566666655444443322356799999999999999975 34 321 1 122678888877
Q ss_pred HHH
Q psy3431 233 NRL 235 (549)
Q Consensus 233 ~~l 235 (549)
+.+
T Consensus 175 e~~ 177 (315)
T 1t6c_A 175 ETF 177 (315)
T ss_dssp HHH
T ss_pred HHh
Confidence 665
No 39
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=97.29 E-value=0.00024 Score=72.89 Aligned_cols=83 Identities=19% Similarity=0.176 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHHHHc-CC--ceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCC
Q psy3431 148 NDAQRQATKDAGAIA-GL--NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDT 224 (549)
Q Consensus 148 ~~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~ 224 (549)
...+-+.+.+|.+.+ |+ .+-. -||.||+++...... .+..++++||||||||++++.-..- ..... .
T Consensus 366 ~~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE--~eLGvaiIDmGGGTTd~sVf~~G~l--v~a~~----i 435 (610)
T 2d0o_A 366 DRLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG--TTRPLAILDLGAGSTDASIINPKGD--IIATH----L 435 (610)
T ss_dssp SCCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT--CCSSEEEEEECSSEEEEEEECTTCC--EEEEE----E
T ss_pred CHHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC--CcCCeEEEEeCCCcceEEEEcCCcE--EEEEE----e
Confidence 344577889999999 99 6666 999999998876543 6778999999999999999964322 22212 4
Q ss_pred CCCcchHHHHHHHHHH
Q psy3431 225 HLGGEDFDNRLVSHLA 240 (549)
Q Consensus 225 ~lGG~~iD~~l~~~l~ 240 (549)
..||.+++..|..-|.
T Consensus 436 p~gG~~VT~DIA~~Lg 451 (610)
T 2d0o_A 436 AGAGDMVTMIIARELG 451 (610)
T ss_dssp ECSHHHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHhC
Confidence 5899999988876554
No 40
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=97.09 E-value=0.00033 Score=72.05 Aligned_cols=80 Identities=18% Similarity=0.103 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHc-CC--ceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCC
Q psy3431 151 QRQATKDAGAIA-GL--NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLG 227 (549)
Q Consensus 151 qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lG 227 (549)
+-+.+.+|.+.+ |+ .+-. -||.||+++...... .+..++++||||||||++++.-..- ..... ...|
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE--~elGvaiIDmGgGTTd~sVf~~g~l--v~a~~----ip~g 440 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG--CAAPLAILDLGAGSTDAAIVNAEGQ--ITAVH----LAGA 440 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT--CCSSEEEEEECSSEEEEEEECSSSC--EEEEE----EECC
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC--CcCCeEEEEeCCCcceEEEEcCCcE--EEEEE----eccc
Confidence 345688888888 99 5545 899999988866533 6778999999999999999974332 22211 4589
Q ss_pred cchHHHHHHHHHH
Q psy3431 228 GEDFDNRLVSHLA 240 (549)
Q Consensus 228 G~~iD~~l~~~l~ 240 (549)
|.+++..|..-|.
T Consensus 441 G~~VT~DIA~~Lg 453 (607)
T 1nbw_A 441 GNMVSLLIKTELG 453 (607)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhC
Confidence 9999988876554
No 41
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=96.40 E-value=0.016 Score=56.76 Aligned_cols=76 Identities=18% Similarity=0.298 Sum_probs=45.4
Q ss_pred HHHHHHHHHcCCceeEeecchhHHHHhhhcccCCC-CCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchH
Q psy3431 153 QATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLK-GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDF 231 (549)
Q Consensus 153 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~-~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~i 231 (549)
..+..+-+..|+++--|=.|-+|.-.+.+...... .....+|+|+|||+|.+++++ ++......+ -++|...+
T Consensus 93 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~~~S----l~lG~vrl 166 (315)
T 3mdq_A 93 VLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN--KNEILWKQS----FEIGGQRL 166 (315)
T ss_dssp HHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC--SSCEEEEEE----ESCCHHHH
T ss_pred HHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE--CCeEeeeEE----EechhhHH
Confidence 34555556679987444445555444334433222 246799999999999999986 231222112 56777766
Q ss_pred HHH
Q psy3431 232 DNR 234 (549)
Q Consensus 232 D~~ 234 (549)
.+.
T Consensus 167 ~e~ 169 (315)
T 3mdq_A 167 IDR 169 (315)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 42
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=95.09 E-value=0.14 Score=50.52 Aligned_cols=81 Identities=21% Similarity=0.310 Sum_probs=46.6
Q ss_pred HHHHHHHHHcCCceeEeecchhHHHHhh-hcccCCC---CCceEEEEEcCCCceeeeEEEeeCCcE-EEEEEecCCCCCC
Q psy3431 153 QATKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNLK---GERNVLIFDLGGGTFDVSILSIDEGAL-FEVRSTAGDTHLG 227 (549)
Q Consensus 153 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~---~~~~vlv~D~Gggt~dvsv~~~~~~~~-~~v~~~~~d~~lG 227 (549)
..+..+-+..|+++ .+|+-.+=|.+.| +...... .....+++|+||||++++++.-..+.. -.+.. .....+|
T Consensus 106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~-~~SlplG 183 (343)
T 3cer_A 106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQG-AFSMNIG 183 (343)
T ss_dssp HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSE-EEEESCC
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccce-eEEEehh
Confidence 34555555679886 5666555555444 4333222 235699999999999999975410100 00001 1125688
Q ss_pred cchHHHHH
Q psy3431 228 GEDFDNRL 235 (549)
Q Consensus 228 G~~iD~~l 235 (549)
+..+.+.+
T Consensus 184 ~v~lt~~~ 191 (343)
T 3cer_A 184 SVRMTERH 191 (343)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 88777654
No 43
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=94.71 E-value=0.11 Score=54.43 Aligned_cols=75 Identities=19% Similarity=0.279 Sum_probs=45.9
Q ss_pred HHHHHHHHcCCceeEeecchhHHHHhh-hcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHH
Q psy3431 154 ATKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFD 232 (549)
Q Consensus 154 ~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD 232 (549)
.+..+-+..|+++ .+|+-.+=|.+.| |...........+|+|+|||+|.+++.+ ++ .+. ... .-.+|...+.
T Consensus 101 fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~-~~~--~~~-Sl~lG~vrlt 173 (513)
T 1u6z_A 101 FLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NF-EPI--LVE-SRRMGCVSFA 173 (513)
T ss_dssp HHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TT-EEE--EEE-EESCCHHHHH
T ss_pred HHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CC-eee--EEE-EEeccHHHHH
Confidence 3444445568886 5666555554444 4433332223799999999999999874 34 221 111 2578888876
Q ss_pred HHH
Q psy3431 233 NRL 235 (549)
Q Consensus 233 ~~l 235 (549)
+.+
T Consensus 174 e~f 176 (513)
T 1u6z_A 174 QLY 176 (513)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 44
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=93.88 E-value=0.43 Score=44.74 Aligned_cols=22 Identities=27% Similarity=0.381 Sum_probs=18.7
Q ss_pred CCEEEEEcCccceEEEEEECCe
Q psy3431 1 MPAIGIDLGTTYSCVAVFQQGK 22 (549)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~g~ 22 (549)
|+.+.||.|+|++++|++.++.
T Consensus 3 ~M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 3 PMYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp CEEEEEEECSSEEEEEEESSSS
T ss_pred ceEEEEEECCCeEEEEEEECCE
Confidence 3689999999999999987554
No 45
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=93.43 E-value=0.44 Score=46.08 Aligned_cols=45 Identities=24% Similarity=0.290 Sum_probs=29.4
Q ss_pred HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431 161 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
..|++ +.+.|+..|||++-.........++++++-+|.| .-.+++
T Consensus 97 ~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 97 ATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEE
Confidence 34665 5899999999987644332234567788888877 334444
No 46
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=92.75 E-value=0.6 Score=44.15 Aligned_cols=21 Identities=24% Similarity=0.336 Sum_probs=19.2
Q ss_pred CEEEEEcCccceEEEEEECCe
Q psy3431 2 PAIGIDLGTTYSCVAVFQQGK 22 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~g~ 22 (549)
+.++||+|+|+++++++.++.
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 689999999999999998775
No 47
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=92.21 E-value=0.81 Score=44.58 Aligned_cols=45 Identities=27% Similarity=0.316 Sum_probs=30.8
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEE
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILS 208 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~ 208 (549)
.|++ +.+.|+..|+|++..........++++++-+|.| .-..++.
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEE
Confidence 4776 6899999999987544322234567888888887 5555553
No 48
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=91.22 E-value=1.3 Score=43.22 Aligned_cols=44 Identities=27% Similarity=0.450 Sum_probs=30.3
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
.|++ +.+.|+..|+|++-.........++++++-+|.| +-.+++
T Consensus 120 ~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii 163 (327)
T 4db3_A 120 IGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLI 163 (327)
T ss_dssp HSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEE
Confidence 4776 6899999999987654433234577888888877 444444
No 49
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=90.47 E-value=1.7 Score=41.75 Aligned_cols=44 Identities=25% Similarity=0.308 Sum_probs=29.1
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
.|++ +.+.|+..|+|++-.........++++++-+|.| +-.+++
T Consensus 97 ~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~giv 140 (297)
T 4htl_A 97 TGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTG-IGGGIF 140 (297)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcc-eEEEEE
Confidence 4776 6899999999987544322234566788888876 334444
No 50
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=89.96 E-value=6.7 Score=38.23 Aligned_cols=82 Identities=5% Similarity=0.007 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHH-h-CC-CcceEEEEecCCCCHHHHHHHHHHHHHc-C--CceeEeecchhHHHHhhhcccCC
Q psy3431 113 PEEISSMVLTKMKETAEAY-L-GH-SVRDAVITVPAYFNDAQRQATKDAGAIA-G--LNVMRIVNEPTAAALAYGLDKNL 186 (549)
Q Consensus 113 ~~~v~~~~L~~l~~~a~~~-~-~~-~~~~~vitVPa~f~~~qr~~l~~Aa~~A-G--l~~~~li~Ep~Aaal~y~~~~~~ 186 (549)
++++...+...+.+..+.. . .. ++..+.|++|...+......+.+..+.. | .-.+.+.|+..|||+++ . .
T Consensus 45 ~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~--~- 120 (347)
T 2ch5_A 45 TDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T--P- 120 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C--S-
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C--C-
Confidence 3444444444444433332 1 12 5778999999999877666666666554 3 13578999999999883 2 1
Q ss_pred CCCceEEEEEcCCCc
Q psy3431 187 KGERNVLIFDLGGGT 201 (549)
Q Consensus 187 ~~~~~vlv~D~Gggt 201 (549)
...+++=+|.|.
T Consensus 121 ---~~~v~v~~GTGi 132 (347)
T 2ch5_A 121 ---DGGVVLISGTGS 132 (347)
T ss_dssp ---SCEEEEEESSSE
T ss_pred ---CCcEEEEEcCCc
Confidence 334555556654
No 51
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=89.33 E-value=0.25 Score=38.93 Aligned_cols=21 Identities=29% Similarity=0.362 Sum_probs=18.8
Q ss_pred CCEEEEEcCccceEEEEEECC
Q psy3431 1 MPAIGIDLGTTYSCVAVFQQG 21 (549)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~g 21 (549)
|.++|||+|+..+.+|+..+.
T Consensus 1 mriLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC
T ss_pred CcEEEEEeCCCEEEEEEEeCC
Confidence 789999999999999988654
No 52
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=89.31 E-value=3.1 Score=39.79 Aligned_cols=58 Identities=12% Similarity=0.097 Sum_probs=38.1
Q ss_pred cceEEEEecCCCCHH-HHHHHHHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCc
Q psy3431 136 VRDAVITVPAYFNDA-QRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGT 201 (549)
Q Consensus 136 ~~~~vitVPa~f~~~-qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt 201 (549)
+..+.|++|.. +.. ....+.+..+..|+ .+.+.|+..|+|++-.. ...++++-+|.|.
T Consensus 60 ~~~igi~~~G~-~~~~~~~~l~~~l~~~~~-pv~v~ND~~aaa~~e~~------~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 60 ADVVGMGVAGL-DSKFDWENFTPLASLIAP-KVIIQHDGVIALFAETL------GEPGVVVIAGTGS 118 (299)
T ss_dssp CSEEEEEETTC-CSHHHHHHHHHHHTTSSS-EEEEEEHHHHHHHHHHT------TSCEEEEEESSSE
T ss_pred CCEEEEEcCCC-CchhHHHHHHHHHHhCCC-CEEEeCcHHHHHhhccC------CCCeEEEEecCCE
Confidence 56789999998 543 23344444433343 56888999999876432 3457777789884
No 53
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=87.92 E-value=2 Score=41.63 Aligned_cols=44 Identities=23% Similarity=0.353 Sum_probs=29.8
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
.|++ +.+.|+..|+|++..........+.++++-+|.| +-..++
T Consensus 108 ~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv 151 (326)
T 2qm1_A 108 LGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIV 151 (326)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 4665 6899999999987543322223567888888988 455555
No 54
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=87.69 E-value=1.4 Score=45.88 Aligned_cols=74 Identities=19% Similarity=0.295 Sum_probs=44.5
Q ss_pred HHHHHHHHHHcCCceeEeecchhHHHHhh-hcccCCCCCceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcch
Q psy3431 152 RQATKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGED 230 (549)
Q Consensus 152 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~ 230 (549)
...+..+-+..|+++ .+|+-.+=|.+.| |....... ...+|+|+|||+|.+++++ ++ .+ .. ...-++|...
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~-~~~lvvDIGGGStEl~~~~--~~-~~--~~-~~Sl~lG~vr 174 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQ-PDGIAGDLGGGSLELIDIK--DK-SC--GE-GITLPLGGLR 174 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSS-CEEEEEEECSSCEEEEEEE--TT-EE--CC-CEEESCCHHH
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCC-CCeEEEEeCCCceEEEEee--CC-ee--ee-EEEecceEEe
Confidence 334555556679987 5666554444443 44333322 2459999999999999986 33 22 11 1125678777
Q ss_pred HHH
Q psy3431 231 FDN 233 (549)
Q Consensus 231 iD~ 233 (549)
+.+
T Consensus 175 l~e 177 (508)
T 3hi0_A 175 LSE 177 (508)
T ss_dssp HHH
T ss_pred hhh
Confidence 664
No 55
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=87.01 E-value=1.2 Score=43.24 Aligned_cols=43 Identities=21% Similarity=0.331 Sum_probs=29.3
Q ss_pred CCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431 163 GLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 163 Gl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
|++ +.+.|+..|+|++-.........++++++-+|.| .-.+++
T Consensus 119 ~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii 161 (321)
T 3r8e_A 119 HIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVM 161 (321)
T ss_dssp TSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred CCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 665 6899999999987544322234567888888887 444544
No 56
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=86.28 E-value=3.7 Score=39.41 Aligned_cols=44 Identities=20% Similarity=0.239 Sum_probs=28.9
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
.|++ +.+.|+..|+|++-.........++++++-+|.| .-.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 3776 6899999999987644322234567788877765 344444
No 57
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=86.18 E-value=3.9 Score=39.67 Aligned_cols=44 Identities=20% Similarity=0.257 Sum_probs=28.8
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
.|++ +.+.|+..|||++..........+.++++-+|.| .-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 4665 6899999999987543222123467888888877 344444
No 58
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=85.27 E-value=3.6 Score=39.03 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=29.7
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
.|++ +.+.|+..|||++.......... +++++-+|.| .-.+++
T Consensus 96 ~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii 138 (289)
T 2aa4_A 96 TNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVV 138 (289)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEE
Confidence 4665 68999999999876443322234 8888999988 455555
No 59
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=84.56 E-value=1.9 Score=41.06 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=28.8
Q ss_pred HcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431 161 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 161 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
..|++ +.+.|+..|||++... . ....++++++-+|.| .-.+++
T Consensus 93 ~~~~p-v~v~NDa~aaa~~e~~-~-~~~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 93 SYQLP-VHLENDANCVGLSELL-A-HPELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GGCCC-EEEEEHHHHHHHHHHH-H-CTTCSSEEEEEESSS-EEEEEE
T ss_pred HcCCC-EEEechHHHHHHHHHH-h-cCCCCeEEEEEECCc-eEEEEE
Confidence 34665 6899999999987644 1 123467788888877 334444
No 60
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=83.78 E-value=1.9 Score=44.14 Aligned_cols=56 Identities=11% Similarity=-0.023 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHcCCc--eeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEe
Q psy3431 150 AQRQATKDAGAIAGLN--VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSI 209 (549)
Q Consensus 150 ~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~ 209 (549)
.-++.+.++...-|++ ++.++|+..|++++-... ....++.+=+|-|+=-..+...
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~----~~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYT----DAXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHH----CTTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhc----CCccEEEEEECcEEEEEEEECC
Confidence 4567777887666664 589999999999987663 2456676777888655555554
No 61
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=82.75 E-value=5.6 Score=40.25 Aligned_cols=44 Identities=25% Similarity=0.326 Sum_probs=29.3
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
.|++ +.+.|+..|||++............++++-+|.| .-.+++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEE
Confidence 4766 6899999999987543322224567788888877 445554
No 62
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=82.39 E-value=16 Score=34.11 Aligned_cols=44 Identities=27% Similarity=0.398 Sum_probs=28.4
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCC-ceEEEEEcCCCceeeeEE
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGE-RNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~-~~vlv~D~Gggt~dvsv~ 207 (549)
.|++ +.+.|+..|||++.......... ..++++-+|.| .-.+++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEE
Confidence 4666 68999999999885433221222 35677778876 555554
No 63
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=82.32 E-value=8.3 Score=38.10 Aligned_cols=44 Identities=27% Similarity=0.369 Sum_probs=29.2
Q ss_pred cCCceeEeecchhHHHHhhhccc-------------CCCCCceEEEEEcCCCceeeeEE
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDK-------------NLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~-------------~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
.|++ +.+.|+..|+|++-.... .....++++++-+|.| +-.+++
T Consensus 108 ~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtG-IG~giv 164 (366)
T 3mcp_A 108 FGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTG-FGAGVV 164 (366)
T ss_dssp HCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCc-ceEEEE
Confidence 4776 689999999998754332 2234567888888765 344444
No 64
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=82.13 E-value=0.62 Score=39.83 Aligned_cols=20 Identities=35% Similarity=0.544 Sum_probs=17.8
Q ss_pred CCEEEEEcCccceEEEEEEC
Q psy3431 1 MPAIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~ 20 (549)
|.++|||+|+..+.+|+..+
T Consensus 3 mriLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEEECSSEEEEEEECT
T ss_pred CEEEEEEccCCEEEEEEEEC
Confidence 67999999999999998764
No 65
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=81.99 E-value=4.1 Score=41.85 Aligned_cols=59 Identities=10% Similarity=0.083 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHHHcCCc--eeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEee
Q psy3431 148 NDAQRQATKDAGAIAGLN--VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSID 210 (549)
Q Consensus 148 ~~~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~ 210 (549)
...-.+.+.+|.+.-|++ ++.++|+.+|++++.++.. ...++.+=+|-|+=-+.+....
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~----~~~~iglIlGTG~N~~y~e~~~ 244 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD----PQTKMGIIIGTGVNGAYYDVVS 244 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC----TTEEEEEEESSSEEEEEEEEGG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC----CCcEEEEEEecCcceEEEeecc
Confidence 455677899999888886 4789999999999877652 3566666688887766666543
No 66
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=81.62 E-value=15 Score=36.28 Aligned_cols=42 Identities=14% Similarity=0.208 Sum_probs=28.0
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
.|++ +.+.|+..|||++....... . ..++++-+|.| +-.+++
T Consensus 188 ~~~p-V~v~NDanaaalaE~~~g~~-~-~~~v~l~~GtG-iG~giv 229 (380)
T 2hoe_A 188 YGIE-VWVENDADMGAVGEKWYTKR-D-DSFAWILTGKG-IGAGII 229 (380)
T ss_dssp HCSE-EEEEEHHHHHHHHHHHHTTC-C-SCEEEEEESSS-CEEEEE
T ss_pred hCCC-EEEechHHHHHHHHHHhCCC-C-CcEEEEEeCCc-eEEEEE
Confidence 4765 68999999999875433221 2 67788888877 334444
No 67
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=80.03 E-value=9.5 Score=38.16 Aligned_cols=44 Identities=18% Similarity=0.288 Sum_probs=29.3
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
.|++ +.+.|+..|||++............++++-+|.| .-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence 4665 6899999999987543322223467788888887 445555
No 68
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=77.89 E-value=2.4 Score=36.49 Aligned_cols=19 Identities=26% Similarity=0.410 Sum_probs=17.4
Q ss_pred CCEEEEEcCccceEEEEEE
Q psy3431 1 MPAIGIDLGTTYSCVAVFQ 19 (549)
Q Consensus 1 m~vvGID~Gtt~s~va~~~ 19 (549)
|.|+|||-|++++..++..
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 7899999999999999874
No 69
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=77.80 E-value=16 Score=35.39 Aligned_cols=44 Identities=27% Similarity=0.223 Sum_probs=29.2
Q ss_pred cCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEE
Q psy3431 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 207 (549)
Q Consensus 162 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~ 207 (549)
.|++ +.+.|+..|||++............++++-+|.| .-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 3665 6899999999987544322223467788888877 444444
No 70
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=77.40 E-value=45 Score=32.15 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=19.9
Q ss_pred CCEEEEEcCccceEEEEEECCe
Q psy3431 1 MPAIGIDLGTTYSCVAVFQQGK 22 (549)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~g~ 22 (549)
|.++|||-++..+++|+.++|+
T Consensus 1 M~iLgIdts~~~~~val~~~g~ 22 (330)
T 2ivn_A 1 MLALGIEGTAHTLGIGIVSEDK 22 (330)
T ss_dssp CCEEEEECSSSEEEEEEECSSC
T ss_pred CEEEEEEccCCCeEEEEEECCE
Confidence 8899999999999999988764
No 71
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=74.96 E-value=2.3 Score=35.66 Aligned_cols=20 Identities=35% Similarity=0.282 Sum_probs=17.9
Q ss_pred CEEEEEcCccceEEEEEECC
Q psy3431 2 PAIGIDLGTTYSCVAVFQQG 21 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~g 21 (549)
.++|||+|+..+.||+..+.
T Consensus 4 ~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT
T ss_pred eEEEEEeCCCEEEEEEEcCC
Confidence 38999999999999998764
No 72
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=74.03 E-value=2.1 Score=37.13 Aligned_cols=19 Identities=37% Similarity=0.398 Sum_probs=17.4
Q ss_pred CCEEEEEcCccceEEEEEE
Q psy3431 1 MPAIGIDLGTTYSCVAVFQ 19 (549)
Q Consensus 1 m~vvGID~Gtt~s~va~~~ 19 (549)
|.|+|||-|++++..++..
T Consensus 1 MrILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEE
Confidence 8899999999999999864
No 73
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=73.40 E-value=3.2 Score=40.94 Aligned_cols=43 Identities=16% Similarity=0.309 Sum_probs=27.7
Q ss_pred eeEeecchhHHHHhh-----hcccCC-CCCceEEEEEcCCCceeeeEEE
Q psy3431 166 VMRIVNEPTAAALAY-----GLDKNL-KGERNVLIFDLGGGTFDVSILS 208 (549)
Q Consensus 166 ~~~li~Ep~Aaal~y-----~~~~~~-~~~~~vlv~D~Gggt~dvsv~~ 208 (549)
.+++|+-.+=|.+.| .+..-. ...++++|+|+|||++.++...
T Consensus 110 ~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 110 EAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred eEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 356777655454443 333211 1345799999999999999873
No 74
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=72.82 E-value=26 Score=33.76 Aligned_cols=42 Identities=21% Similarity=0.347 Sum_probs=28.7
Q ss_pred HHcCCceeEeecchhHHHHhhhccc--------C--CCCCceEEEEEcCCCc
Q psy3431 160 AIAGLNVMRIVNEPTAAALAYGLDK--------N--LKGERNVLIFDLGGGT 201 (549)
Q Consensus 160 ~~AGl~~~~li~Ep~Aaal~y~~~~--------~--~~~~~~vlv~D~Gggt 201 (549)
+..|++.+.+.|+-.|+|++-.... . .....+++++-+|.|-
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGi 150 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGL 150 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccc
Confidence 3458887899999999998754320 0 1234668888888873
No 75
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=68.60 E-value=27 Score=27.79 Aligned_cols=51 Identities=10% Similarity=0.191 Sum_probs=37.8
Q ss_pred cChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy3431 478 LTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGG 532 (549)
Q Consensus 478 ~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~~~ 532 (549)
+-..+++.+...|++-.+-++. ..+.++.+++.++.....+...+++.+++
T Consensus 63 fv~~~~~ea~~~L~~~~e~ie~----~i~~le~~~~~l~~~l~~lk~~l~~~~~~ 113 (117)
T 2zqm_A 63 IVKTTKDKAVAELKEKIETLEV----RLNALERQEKKLNEKLKELTAQIQSALRP 113 (117)
T ss_dssp EEEECHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HhhccHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3345677777777777777764 66778888888888888888888887643
No 76
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=67.82 E-value=5.3 Score=40.80 Aligned_cols=44 Identities=16% Similarity=0.311 Sum_probs=29.3
Q ss_pred ceeEeecchhHHHHhh-----hcccCC----------CCCceEEEEEcCCCceeeeEEE
Q psy3431 165 NVMRIVNEPTAAALAY-----GLDKNL----------KGERNVLIFDLGGGTFDVSILS 208 (549)
Q Consensus 165 ~~~~li~Ep~Aaal~y-----~~~~~~----------~~~~~vlv~D~Gggt~dvsv~~ 208 (549)
..+++|+-.+=|.+.| .+..-. +...+++|+|+|||++.++...
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred CceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 4578888666555544 333210 1245689999999999999874
No 77
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=67.32 E-value=19 Score=36.54 Aligned_cols=58 Identities=16% Similarity=0.142 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHHHHcCCc--eeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEe
Q psy3431 148 NDAQRQATKDAGAIAGLN--VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSI 209 (549)
Q Consensus 148 ~~~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~ 209 (549)
...-++.+++|...-|++ ++.++|+..|++++.+... ...++.+=+|-|+=-+.+...
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~----~~~~iglIlGTG~na~yve~~ 230 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED----PKCAVGLIVGTGTNVAYIEDS 230 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEEET
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC----CCcEEEEEEeCCcceEEEEcC
Confidence 456678888888877876 3599999999998877652 346666678888765555553
No 78
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=62.85 E-value=69 Score=27.00 Aligned_cols=102 Identities=18% Similarity=0.203 Sum_probs=60.9
Q ss_pred CCCHHHHHHHHHHHHhhhhhhHHHHHHHHH-------------------hhhHHHHHHHHHHHhhhccCccC--hhHHHH
Q psy3431 427 RLSKEEIDRMINDAERYKDEDEKQKERISA-------------------RNNLEAYVFNVKQALDDAGNKLT--ESEKSR 485 (549)
Q Consensus 427 ~ls~eei~~~~~~~~~~~~~D~~~~~~~~a-------------------~N~LE~~iy~~r~~l~~~~~~~~--~~e~~~ 485 (549)
+...+++-+..+.++.-.-.|...|++... -..|..-+.+....|.+.-..+. -.+|..
T Consensus 21 p~~~~elik~L~~le~sassDa~vrq~Ia~LP~eVsd~s~l~klkDk~~~e~l~~~veeA~~~L~eYn~rL~~E~~dR~~ 100 (152)
T 4fla_A 21 PLLTEELIKALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYNGRLAAELEDRRQ 100 (152)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGTCGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhccccchHHHHHHHHcCCccccCHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677878888888777778776666522 12233333333333322111111 346778
Q ss_pred HHHHHHHHHHHhhcC---CcCCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431 486 CREECDATLKWLDNN---TLADKEEYQDKLQQLQKSCMPLMSKMHG 528 (549)
Q Consensus 486 i~~~l~~~~~Wl~~~---~~a~~~~~~~kl~~L~~~~~~i~~r~~e 528 (549)
+...|.+......+. .....++|+.|+..+++....+...+..
T Consensus 101 L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~s 146 (152)
T 4fla_A 101 LARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQS 146 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 888888877666543 1246678999999999888888776643
No 79
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=59.98 E-value=5.4 Score=37.95 Aligned_cols=21 Identities=29% Similarity=0.336 Sum_probs=17.9
Q ss_pred CEEEEEcCccceEEEEEECCe
Q psy3431 2 PAIGIDLGTTYSCVAVFQQGK 22 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~g~ 22 (549)
..+|||+|+|.+++++.+++.
T Consensus 21 ~~iGIDiGsTt~K~V~~~~~~ 41 (287)
T 2ews_A 21 MKVGIDAGGTLIKIVQEQDNQ 41 (287)
T ss_dssp CEEEEEECSSEEEEEEECSSC
T ss_pred eEEEEEEChhhEEEEEEcCCE
Confidence 579999999999999886553
No 80
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=58.03 E-value=36 Score=38.06 Aligned_cols=57 Identities=18% Similarity=0.235 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHHHcC-C--ceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEE
Q psy3431 148 NDAQRQATKDAGAIAG-L--NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILS 208 (549)
Q Consensus 148 ~~~qr~~l~~Aa~~AG-l--~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~ 208 (549)
...-++.+.++...-| + .++.++|+..|++++-... ....++.+=+|-|+=-..+..
T Consensus 182 g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~----~~~~~iglilGTGvngg~i~~ 241 (917)
T 1cza_N 182 GADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD----DQHCEVGLIIGTGTNACYMEE 241 (917)
T ss_dssp TSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHH----CTTEEEEEEESSSEEEEEEEE
T ss_pred CCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhcc----CCCcEEEEEEECCcceEEEec
Confidence 3455677777777666 5 4789999999999987655 235666667787765444444
No 81
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=55.25 E-value=11 Score=38.17 Aligned_cols=44 Identities=20% Similarity=0.363 Sum_probs=27.9
Q ss_pred ceeEeecchhHHHHh-----hhcccCCC-CCceEEEEEcCCCceeeeEEE
Q psy3431 165 NVMRIVNEPTAAALA-----YGLDKNLK-GERNVLIFDLGGGTFDVSILS 208 (549)
Q Consensus 165 ~~~~li~Ep~Aaal~-----y~~~~~~~-~~~~vlv~D~Gggt~dvsv~~ 208 (549)
..+++|+-.+=+.+. |.+..-.. ...++.++|+|||++.++...
T Consensus 150 ~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 150 QGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred CceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 357888766555443 34332111 235788999999999998664
No 82
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=54.34 E-value=24 Score=36.15 Aligned_cols=31 Identities=23% Similarity=0.462 Sum_probs=24.7
Q ss_pred CCceEEEEEcCCCceeeeEEEeeCCcEEEEE
Q psy3431 188 GERNVLIFDLGGGTFDVSILSIDEGALFEVR 218 (549)
Q Consensus 188 ~~~~vlv~D~Gggt~dvsv~~~~~~~~~~v~ 218 (549)
+...+|.+|+||.++-+.++++.+...+++.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~ 108 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGNHDFDTT 108 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESSSCEEEE
T ss_pred cceEEEEEEecCCeEEEEEEEECCCCceEEE
Confidence 4568999999999999999999765344444
No 83
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=54.34 E-value=7.1 Score=40.45 Aligned_cols=18 Identities=22% Similarity=0.337 Sum_probs=16.3
Q ss_pred EEEEEcCccceEEEEEEC
Q psy3431 3 AIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~ 20 (549)
++|||+|||+++++++..
T Consensus 6 ~lgIDiGtT~~k~~l~d~ 23 (503)
T 2w40_A 6 ILSIDQSTQSTKVFFYDE 23 (503)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEeCCcceEEEEECC
Confidence 799999999999998864
No 84
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=54.32 E-value=7.3 Score=40.40 Aligned_cols=18 Identities=33% Similarity=0.549 Sum_probs=16.3
Q ss_pred EEEEEcCccceEEEEEEC
Q psy3431 3 AIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~ 20 (549)
++|||+|||+++++++..
T Consensus 6 ~lgIDiGtts~K~~l~d~ 23 (504)
T 3ll3_A 6 IIGMDVGTTATKGVLYDI 23 (504)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEecCCceEEEEEcC
Confidence 899999999999998854
No 85
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=53.67 E-value=8.1 Score=40.17 Aligned_cols=20 Identities=30% Similarity=0.391 Sum_probs=17.6
Q ss_pred EEEEEcCccceEEEEEE--CCe
Q psy3431 3 AIGIDLGTTYSCVAVFQ--QGK 22 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~--~g~ 22 (549)
++|||+|||+++++++. +|+
T Consensus 7 ~lgIDiGtts~ka~l~d~~~G~ 28 (515)
T 3i8b_A 7 VAGVDTSTQSCKVRVTDAETGE 28 (515)
T ss_dssp EEEEEECSSEEEEEEEETTTCC
T ss_pred EEEEEeccccEEEEEEECCCCe
Confidence 89999999999999987 454
No 86
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=52.90 E-value=6.7 Score=40.54 Aligned_cols=18 Identities=33% Similarity=0.449 Sum_probs=16.3
Q ss_pred EEEEEcCccceEEEEEEC
Q psy3431 3 AIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~ 20 (549)
++|||+|||+++++++..
T Consensus 4 ~lgiDiGtT~~k~~l~d~ 21 (495)
T 2dpn_A 4 LLALDQGTTSSRAILFTL 21 (495)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEeeCCcceEEEEECC
Confidence 899999999999998853
No 87
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=52.44 E-value=38 Score=37.87 Aligned_cols=58 Identities=12% Similarity=0.166 Sum_probs=41.2
Q ss_pred CHHHHHHHHHHHHHc-CC--ceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEe
Q psy3431 148 NDAQRQATKDAGAIA-GL--NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSI 209 (549)
Q Consensus 148 ~~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~ 209 (549)
...-.+.+++|...- ++ +++.++|+.+|++++.++.. ....+.+=+|-|+=-+.+...
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~----~~~~iglIlGTG~na~y~e~~ 690 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE----PTCEVGLIVGTGSNACYMEEM 690 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEEET
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC----CCcEEEEEEeCCeeEEEEEcC
Confidence 555677788887643 44 68999999999998876652 356666667888766655553
No 88
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=52.00 E-value=10 Score=36.67 Aligned_cols=36 Identities=19% Similarity=0.207 Sum_probs=24.3
Q ss_pred eecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEE
Q psy3431 169 IVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILS 208 (549)
Q Consensus 169 li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~ 208 (549)
...-|.|.|...+... ....+++|+||.|||+..+.
T Consensus 110 aaanw~ASa~~~A~~~----~~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 110 SASNWCGTAKWVSKNI----EENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp BCCSSHHHHHHHHHHT----CSSEEEEEECSSCEEEEEEE
T ss_pred HhcCHHHHHHHHHHhc----CCCEEEEEcCcchhhhhhhc
Confidence 3445666666333331 12479999999999998886
No 89
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=51.35 E-value=8 Score=40.06 Aligned_cols=18 Identities=44% Similarity=0.569 Sum_probs=16.3
Q ss_pred EEEEEcCccceEEEEEEC
Q psy3431 3 AIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~ 20 (549)
++|||+|||+++++++..
T Consensus 8 ~lgIDiGtts~k~~l~d~ 25 (501)
T 3g25_A 8 ILSIDQGTTSSRAILFNQ 25 (501)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEeCccceEEEEEcC
Confidence 899999999999998853
No 90
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=50.62 E-value=10 Score=39.24 Aligned_cols=19 Identities=32% Similarity=0.538 Sum_probs=16.7
Q ss_pred EEEEEcCccceEEEEEECC
Q psy3431 3 AIGIDLGTTYSCVAVFQQG 21 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~g 21 (549)
++|||+|||+++++++...
T Consensus 9 ~lgIDiGtts~k~~l~d~~ 27 (508)
T 3ifr_A 9 VIGLDIGTTSTIAILVRLP 27 (508)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEecCcceEEEEECCC
Confidence 7999999999999988643
No 91
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=50.40 E-value=37 Score=34.53 Aligned_cols=54 Identities=22% Similarity=0.364 Sum_probs=33.9
Q ss_pred CCceEEEEEcCCCceeeeEEEeeCCc----EEEEEEecCCCC----CCcchHHHHHHHHHHHHHH
Q psy3431 188 GERNVLIFDLGGGTFDVSILSIDEGA----LFEVRSTAGDTH----LGGEDFDNRLVSHLAEEFK 244 (549)
Q Consensus 188 ~~~~vlv~D~Gggt~dvsv~~~~~~~----~~~v~~~~~d~~----lGG~~iD~~l~~~l~~~~~ 244 (549)
+...+|.+|+||.+|-|.+|++.++. .+++....+... .| . ...|++|+.+.+.
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~~l~~g-t--~~eLFd~IA~~i~ 136 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTG-T--AEMLFDYISECIS 136 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHHHHSS-B--HHHHHHHHHHHHH
T ss_pred cceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCChHhccC-C--HHHHHHHHHHHHH
Confidence 45689999999999999999997653 355443333111 22 1 3556666665443
No 92
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=50.20 E-value=8.4 Score=40.18 Aligned_cols=17 Identities=35% Similarity=0.481 Sum_probs=15.6
Q ss_pred EEEEEcCccceEEEEEE
Q psy3431 3 AIGIDLGTTYSCVAVFQ 19 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~ 19 (549)
++|||+|||+++++++.
T Consensus 6 vlgID~GTss~Ka~l~d 22 (526)
T 3ezw_A 6 IVALDQGTTSSRAVVMD 22 (526)
T ss_dssp EEEEEECSSEEEEEEEC
T ss_pred EEEEEccccceeeeEEc
Confidence 79999999999999875
No 93
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=49.80 E-value=67 Score=32.67 Aligned_cols=58 Identities=16% Similarity=0.200 Sum_probs=41.9
Q ss_pred CHHHHHHHHHHHHHcC---CceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEe
Q psy3431 148 NDAQRQATKDAGAIAG---LNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSI 209 (549)
Q Consensus 148 ~~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~ 209 (549)
...-.+.+++|++.-| ++++.|+|+.+|.-++.++.. +...+-+=+|-||--+.+-+.
T Consensus 183 G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~----~~~~iGlI~GTGtNa~Y~E~~ 243 (470)
T 3f9m_A 183 GNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED----HQCEVGMIVGTGCNACYMEEM 243 (470)
T ss_dssp TSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC----CCceEEEEEecCCceEEeeec
Confidence 4455778889998887 468899999999988776653 345555557888775555554
No 94
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=49.30 E-value=10 Score=39.96 Aligned_cols=19 Identities=26% Similarity=0.413 Sum_probs=16.8
Q ss_pred CEEEEEcCccceEEEEEEC
Q psy3431 2 PAIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~ 20 (549)
-++|||+|||+++++++..
T Consensus 6 ~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEecCCcceEEEEEEC
Confidence 3899999999999998864
No 95
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=49.26 E-value=9.2 Score=39.52 Aligned_cols=18 Identities=28% Similarity=0.527 Sum_probs=16.4
Q ss_pred EEEEEcCccceEEEEEEC
Q psy3431 3 AIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~ 20 (549)
++|||+|||+++++++..
T Consensus 5 ~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 5 VLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEecCCchhEEEEECC
Confidence 899999999999998854
No 96
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=49.24 E-value=15 Score=33.89 Aligned_cols=76 Identities=8% Similarity=0.062 Sum_probs=37.7
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcc-------CccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHH
Q psy3431 453 RISARNNLEAYVFNVKQALDDAG-------NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSK 525 (549)
Q Consensus 453 ~~~a~N~LE~~iy~~r~~l~~~~-------~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r 525 (549)
..+.+..|.-|.-++|+++.... ....++=+.++...++++..|+......-.+.+....++|+..+.|....
T Consensus 134 ~eel~~~L~p~~eelr~kl~~~veelk~~l~P~~ee~r~kl~~~~~el~~~l~p~~~e~~~kl~~~~e~lr~~l~p~~e~ 213 (243)
T 2a01_A 134 LHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPALED 213 (243)
T ss_dssp HHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 34455555555555555543322 11234456677777777788776421111122333455555555555554
Q ss_pred Hhc
Q psy3431 526 MHG 528 (549)
Q Consensus 526 ~~e 528 (549)
+.+
T Consensus 214 lk~ 216 (243)
T 2a01_A 214 LRQ 216 (243)
T ss_dssp SSS
T ss_pred HHH
Confidence 443
No 97
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=49.20 E-value=9.1 Score=39.86 Aligned_cols=18 Identities=39% Similarity=0.523 Sum_probs=16.3
Q ss_pred EEEEEcCccceEEEEEEC
Q psy3431 3 AIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~ 20 (549)
++|||+|||+++++++..
T Consensus 28 ~lgIDiGtts~k~~l~d~ 45 (520)
T 4e1j_A 28 ILAIDQGTTSTRAIVFDG 45 (520)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEeCCcceEEEEECC
Confidence 899999999999998853
No 98
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=48.46 E-value=9.8 Score=39.95 Aligned_cols=18 Identities=39% Similarity=0.615 Sum_probs=16.3
Q ss_pred EEEEEcCccceEEEEEEC
Q psy3431 3 AIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~ 20 (549)
++|||+|||+++++++..
T Consensus 7 ~lgIDiGtts~ka~l~d~ 24 (554)
T 3l0q_A 7 FIGVDVGTGSARAGVFDL 24 (554)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEECcccEEEEEECC
Confidence 899999999999998863
No 99
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=47.78 E-value=11 Score=39.15 Aligned_cols=18 Identities=39% Similarity=0.588 Sum_probs=16.3
Q ss_pred EEEEEcCccceEEEEEEC
Q psy3431 3 AIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~ 20 (549)
++|||+|||+++++++..
T Consensus 7 ~lgIDiGtts~k~~l~d~ 24 (506)
T 3h3n_X 7 VMAIDQGTTSSRAIIFDR 24 (506)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEcCCCceEEEEECC
Confidence 899999999999998864
No 100
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=47.50 E-value=14 Score=35.03 Aligned_cols=60 Identities=18% Similarity=0.161 Sum_probs=35.1
Q ss_pred CcceEEEEecCCCCHHHHHHHHHHHHH-cCC-ceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCc
Q psy3431 135 SVRDAVITVPAYFNDAQRQATKDAGAI-AGL-NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGT 201 (549)
Q Consensus 135 ~~~~~vitVPa~f~~~qr~~l~~Aa~~-AGl-~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt 201 (549)
.+..+.|++|..- ......+++..+. .++ ..+.+.|+..||++.-. .....+++=+|-|.
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~------g~~~~v~v~~GTGi 120 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC------GDSEGIACILGTGS 120 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT------TTSCEEEEEESSSE
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc------CCCCcEEEEecCCh
Confidence 4556788888864 2222244444443 354 46899999999998642 12233444466665
No 101
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=47.14 E-value=11 Score=39.29 Aligned_cols=18 Identities=22% Similarity=0.309 Sum_probs=16.3
Q ss_pred EEEEEcCccceEEEEEEC
Q psy3431 3 AIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~ 20 (549)
++|||+|||+++++++..
T Consensus 12 ~lgID~GTts~Ka~l~d~ 29 (538)
T 4bc3_A 12 CLGWDFSTQQVKVVAVDA 29 (538)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEEcCcCEEEEEECC
Confidence 799999999999998864
No 102
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=46.15 E-value=11 Score=38.85 Aligned_cols=18 Identities=22% Similarity=0.440 Sum_probs=16.0
Q ss_pred CEEEEEcCccceEEEEEE
Q psy3431 2 PAIGIDLGTTYSCVAVFQ 19 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~ 19 (549)
.++|||+|||+++++++.
T Consensus 5 ~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEE
Confidence 379999999999999874
No 103
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=46.06 E-value=87 Score=27.46 Aligned_cols=66 Identities=21% Similarity=0.136 Sum_probs=38.7
Q ss_pred HHHHHHHhhhHHHHHHHHHHHhhhccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy3431 450 QKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGG 529 (549)
Q Consensus 450 ~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~ 529 (549)
..+.++.|..|+-|.-+++..+.. --++=|..+.-..+++...+ ..++++|+..+.|...++.+.
T Consensus 105 ~kdlEelr~kL~P~~eEL~~~l~~----~~Eelr~~L~Py~eelr~kl-----------~~~~eeLr~~l~P~~eelk~~ 169 (191)
T 1nfn_A 105 GADMEDVCGRLVQYRGEVQAMLGQ----STEELRVRLASHLRKLRKRL-----------LRDADDLQKRLAVYQAGAREG 169 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTC----CCHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH----HHHHHHHHhhhhHHHHHHHH-----------HHHHHHHHHHhHHHHHHHHHH
Confidence 445566777777777777777752 22444556666666555444 346677888888888777666
Q ss_pred C
Q psy3431 530 A 530 (549)
Q Consensus 530 ~ 530 (549)
.
T Consensus 170 l 170 (191)
T 1nfn_A 170 A 170 (191)
T ss_dssp -
T ss_pred H
Confidence 5
No 104
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=45.92 E-value=10 Score=39.31 Aligned_cols=19 Identities=32% Similarity=0.398 Sum_probs=16.6
Q ss_pred CEEEEEcCccceEEEEEEC
Q psy3431 2 PAIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~ 20 (549)
-++|||+|||+++++++..
T Consensus 4 ~~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEcCCcceEEEEECC
Confidence 3799999999999998853
No 105
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=45.91 E-value=1.9e+02 Score=29.05 Aligned_cols=58 Identities=21% Similarity=0.264 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHcC---CceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEe
Q psy3431 148 NDAQRQATKDAGAIAG---LNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSI 209 (549)
Q Consensus 148 ~~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~ 209 (549)
...-.+.+++|...-| ++++.++|+.+|+.++.++.. +...+-+=+|-||=-+.+.++
T Consensus 159 G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~----~~~~iglIlGTGtNa~y~e~~ 219 (445)
T 3hm8_A 159 GQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED----PRCEIGLIVGTGTNACYMEEL 219 (445)
T ss_dssp TSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEEEG
T ss_pred CCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC----CCceEEEEEeCCceEEEEEec
Confidence 3445677888887653 567899999999998876543 345566667888766555544
No 106
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=44.72 E-value=9.1 Score=39.39 Aligned_cols=18 Identities=44% Similarity=0.589 Sum_probs=16.2
Q ss_pred EEEEEcCccceEEEEEEC
Q psy3431 3 AIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~ 20 (549)
++|||+|||+++++++..
T Consensus 8 ~lgIDiGTts~Ka~l~d~ 25 (482)
T 3h6e_A 8 TIVIDLGKTLSKVSLWDL 25 (482)
T ss_dssp CEEEEECSSEEEEEEECT
T ss_pred EEEEEcCCCCeEEEEEEC
Confidence 799999999999998853
No 107
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=43.74 E-value=23 Score=26.67 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=25.8
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCce
Q psy3431 139 AVITVPAYFNDAQRQATKDAGAIAGLNV 166 (549)
Q Consensus 139 ~vitVPa~f~~~qr~~l~~Aa~~AGl~~ 166 (549)
-.++.|+.++..+|..+.+.|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4899999999999999999999999864
No 108
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=43.57 E-value=18 Score=33.93 Aligned_cols=22 Identities=27% Similarity=0.588 Sum_probs=18.9
Q ss_pred CEEEEEcCccceEEEEEECCeE
Q psy3431 2 PAIGIDLGTTYSCVAVFQQGKV 23 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~g~~ 23 (549)
+++.||.|+|+++++++.++..
T Consensus 1 MlL~IDIGNT~ik~gl~~~~~l 22 (268)
T 2h3g_X 1 MIFVLDVGNTNAVLGVFEEGEL 22 (268)
T ss_dssp CEEEEEECSSEEEEEEEETTEE
T ss_pred CEEEEEECcCcEEEEEEECCEE
Confidence 3689999999999999987753
No 109
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=42.97 E-value=12 Score=38.49 Aligned_cols=20 Identities=50% Similarity=0.692 Sum_probs=16.9
Q ss_pred EEEEEcCccceEEEEEE-CCe
Q psy3431 3 AIGIDLGTTYSCVAVFQ-QGK 22 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~-~g~ 22 (549)
++|||+|||+++++++. +|.
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g~ 22 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGE 22 (484)
T ss_dssp EEEEEECSSEEEEEEECTTSC
T ss_pred EEEEEecCcccEEEEECCCCC
Confidence 69999999999999885 443
No 110
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=42.08 E-value=12 Score=38.85 Aligned_cols=19 Identities=26% Similarity=0.216 Sum_probs=16.6
Q ss_pred CEEEEEcCccceEEEEEEC
Q psy3431 2 PAIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~ 20 (549)
-++|||+|||+++++++..
T Consensus 6 ~~lgIDiGtts~k~~l~d~ 24 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADR 24 (511)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEeCCCceEEEEECC
Confidence 3899999999999998853
No 111
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=41.55 E-value=16 Score=34.77 Aligned_cols=56 Identities=13% Similarity=0.094 Sum_probs=34.8
Q ss_pred ceEEEEecCCCCHHHHHHHHHHHHHc--CCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCce
Q psy3431 137 RDAVITVPAYFNDAQRQATKDAGAIA--GLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTF 202 (549)
Q Consensus 137 ~~~vitVPa~f~~~qr~~l~~Aa~~A--Gl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~ 202 (549)
..+.|++|..-+......+.. .. ++ .+.+.|+..||++.-. . ....+++=+|-|..
T Consensus 77 ~~igig~pG~v~~~~~~~l~~---~~~~~~-pv~v~NDa~aaa~ge~---~---~~~~v~v~~GTGig 134 (305)
T 1zc6_A 77 CAIGLGLSGVHNRQWAGEFES---QAPGFA-RLSLATDGYTTLLGAH---G---GQPGIIVALGTGSI 134 (305)
T ss_dssp EEEEEEESCCCTTSHHHHHHH---TCCCCS-EEEEECHHHHHHHHHT---T---TSSEEEEEESSSEE
T ss_pred ceEEEEecCCCchHHHHHHHH---hCCCCc-eEEEECCHHHHHHhhc---C---CCCeEEEEecCCeE
Confidence 468899998876544333221 22 33 5789999999887641 1 23456666787763
No 112
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=40.98 E-value=17 Score=35.18 Aligned_cols=38 Identities=18% Similarity=0.313 Sum_probs=16.5
Q ss_pred CEEEEEcCccceEEEEEE-CCe--EEE--EeCCCCCccceeEE
Q psy3431 2 PAIGIDLGTTYSCVAVFQ-QGK--VEI--IANDQGNRTTPSYV 39 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~-~g~--~~i--i~~~~g~~~~Ps~v 39 (549)
+++|+|+|..|++++... +|. +.. .|-|.|....+.++
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~g~~~~~~~~~PlW~~~~~L~~~l 43 (334)
T 3cet_A 1 MILGIDIGGANTKITELHENGEFKVHHLYFPMWKNNDKLAEVL 43 (334)
T ss_dssp CEEEEEEC--CEEEEEECSTTCCEEEEC---------------
T ss_pred CeeEEEecccceeeeeecCCCceEEEEEecCCcCCchHHHHHH
Confidence 479999999999999865 554 332 25566654444443
No 113
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=40.72 E-value=14 Score=38.32 Aligned_cols=18 Identities=44% Similarity=0.593 Sum_probs=16.2
Q ss_pred EEEEEcCccceEEEEEEC
Q psy3431 3 AIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~ 20 (549)
++|||+|||+++++++..
T Consensus 4 ~lgiDiGtts~k~~l~d~ 21 (504)
T 2d4w_A 4 VLAIDQGTTSSRAIVFDH 21 (504)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEecCCcceEEEEECC
Confidence 799999999999998853
No 114
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=38.60 E-value=95 Score=31.45 Aligned_cols=56 Identities=14% Similarity=0.115 Sum_probs=34.6
Q ss_pred CCceEEEEEcCCCceeeeEEEeeCCcEE--EEEEecCCCCC---CcchHHHHHHHHHHHHH
Q psy3431 188 GERNVLIFDLGGGTFDVSILSIDEGALF--EVRSTAGDTHL---GGEDFDNRLVSHLAEEF 243 (549)
Q Consensus 188 ~~~~vlv~D~Gggt~dvsv~~~~~~~~~--~v~~~~~d~~l---GG~~iD~~l~~~l~~~~ 243 (549)
+...++.+|+||.++-+.++.......+ ......-...+ ++..+=..|++.+.+-.
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~ 119 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFS 119 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHH
Confidence 4667899999999999999998765212 22222222232 55665555666555443
No 115
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=38.60 E-value=1.5e+02 Score=33.72 Aligned_cols=22 Identities=9% Similarity=0.206 Sum_probs=13.5
Q ss_pred CCCCcchHHHHHHHHHHHHHHh
Q psy3431 224 THLGGEDFDNRLVSHLAEEFKR 245 (549)
Q Consensus 224 ~~lGG~~iD~~l~~~l~~~~~~ 245 (549)
..+....|++...+|.-+++..
T Consensus 442 E~f~~NsFEQlcINy~NEkLQq 463 (1080)
T 2dfs_A 442 ETFEINSFEQFCINYANEKLQQ 463 (1080)
T ss_dssp CCCSSBCHHHHHHHHHHHHHHH
T ss_pred cccCcCCHHHHHHHhhhHHHHH
Confidence 4444566777777776665543
No 116
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=37.92 E-value=2e+02 Score=24.81 Aligned_cols=65 Identities=14% Similarity=0.147 Sum_probs=35.6
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhccCccChhHHHHHHHHHHHHHHHhh
Q psy3431 426 GRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLD 498 (549)
Q Consensus 426 ~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~~~e~~~i~~~l~~~~~Wl~ 498 (549)
..||+|+..++.+..+++..+-.. .|.++-+--.+++..+.. +...++..+++.+.+.++..-|.
T Consensus 66 LnLT~EQq~ql~~I~~e~r~~~~~------Lr~ql~akr~EL~aL~~a--~~~DeakI~aL~~Ei~~Lr~qL~ 130 (175)
T 3lay_A 66 SPLTTEQQATAQKIYDDYYTQTSA------LRQQLISKRYEYNALLTA--SSPDTAKINAVAKEMESLGQKLD 130 (175)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH
Confidence 359999988888777776653322 233333333344444432 34555555666666666655554
No 117
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=37.87 E-value=1.7e+02 Score=24.98 Aligned_cols=64 Identities=17% Similarity=0.153 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhccCccChhHHHHHHHHHHHHHH
Q psy3431 426 GRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLK 495 (549)
Q Consensus 426 ~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~~~e~~~i~~~l~~~~~ 495 (549)
.+++.+-..++.+....+.. +......+.|..|+-|+-+++..+. .-.++=|.++...+.++..
T Consensus 83 ~P~t~el~~~l~~~~e~Lr~--~L~~d~EelR~~l~p~~~el~~~l~----~~~EelR~kl~P~~eeL~~ 146 (165)
T 1gs9_A 83 TPVAEETRARLSKELQAAQA--RLGADMEDVRGRLVQYRGEVQAMLG----QSTEELRVRLASHLRKLRK 146 (165)
T ss_dssp CCCCSHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTSTT----CCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 34555545555555554442 3334455666777777766666664 2345556666666666543
No 118
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=36.99 E-value=28 Score=34.44 Aligned_cols=21 Identities=24% Similarity=0.438 Sum_probs=18.6
Q ss_pred CC-EEEEEcCccceEEEEEECC
Q psy3431 1 MP-AIGIDLGTTYSCVAVFQQG 21 (549)
Q Consensus 1 m~-vvGID~Gtt~s~va~~~~g 21 (549)
|+ ++|||+|.|+++++++..+
T Consensus 1 m~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 1 MFRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CCEEEEEEECSSEEEEEEEETT
T ss_pred CCeEEEEECCccceeEEEEecc
Confidence 54 8999999999999998865
No 119
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=36.19 E-value=15 Score=34.87 Aligned_cols=59 Identities=14% Similarity=0.059 Sum_probs=32.1
Q ss_pred cceEEEEecCCCCHHHHHHHHHHHHH-cCC-ceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCc
Q psy3431 136 VRDAVITVPAYFNDAQRQATKDAGAI-AGL-NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGT 201 (549)
Q Consensus 136 ~~~~vitVPa~f~~~qr~~l~~Aa~~-AGl-~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt 201 (549)
+..+.|++|..- ......+++..+. .++ ..+.+.|+-.||+++-. . ....+++=+|-|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~---g---~~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC---G---QKAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT---T---TSCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc---C---CCCcEEEEeCCCh
Confidence 345788888763 2211234444333 454 36899999999998542 1 1233444467766
No 120
>3tso_C RAB11 family-interacting protein 2; RAS GTPase fold (RAB25), vesicle trafficking, endosome, PROT transport; HET: GNP; 1.80A {Homo sapiens} PDB: 2k6s_A
Probab=34.38 E-value=1.3e+02 Score=21.76 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=27.4
Q ss_pred CCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhh
Q psy3431 425 KGRLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDD 473 (549)
Q Consensus 425 ~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~ 473 (549)
+..+|.+|+-++.-..+. +...+.....+||.||..+--++.+
T Consensus 11 y~~ltreELi~l~lk~~~------~l~~k~~~v~eLEdYID~LLvRVME 53 (75)
T 3tso_C 11 YRSLTYEEVLQELVKHKE------LLRRKDTHIRELEDYIDNLLVRVME 53 (75)
T ss_dssp -CCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899987776544432 2333444567899999887666654
No 121
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=34.25 E-value=30 Score=32.44 Aligned_cols=21 Identities=14% Similarity=0.235 Sum_probs=18.4
Q ss_pred CEEEEEcCccceEEEEEE-CCe
Q psy3431 2 PAIGIDLGTTYSCVAVFQ-QGK 22 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~-~g~ 22 (549)
+.+.||.|+|+++++++. ++.
T Consensus 24 M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp EEEEEEECSSCEEEEEEETTTE
T ss_pred cEEEEEeCCCeeEEEEEeCCCE
Confidence 579999999999999998 554
No 122
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=32.61 E-value=3.3e+02 Score=25.93 Aligned_cols=22 Identities=9% Similarity=0.277 Sum_probs=18.8
Q ss_pred CCEEEEEcCccceEEEEEECCe
Q psy3431 1 MPAIGIDLGTTYSCVAVFQQGK 22 (549)
Q Consensus 1 m~vvGID~Gtt~s~va~~~~g~ 22 (549)
|.++|||=-+..+++|++++++
T Consensus 6 M~iLgIdts~~~~svAl~~~~~ 27 (334)
T 3eno_A 6 MIVLGLEGTAHTISCGIIDESR 27 (334)
T ss_dssp CEEEEEECSSSEEEEEEEESSC
T ss_pred ceEEEEECCCcCeEEEEEECCE
Confidence 6799999888889999988764
No 123
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=31.49 E-value=50 Score=30.64 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=24.0
Q ss_pred CEEEEEcCccceEEEEEECCeEEEEeCCCCCccceeEEEEeC
Q psy3431 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTD 43 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~ 43 (549)
+|++||+|..|.+.|...+ +....|+++.+..
T Consensus 41 sIlSID~GikNlAyc~l~~----------~~~~~p~l~~W~k 72 (258)
T 1kcf_A 41 RVLGIDLGIKNFSYCFASQ----------NEDSKVIIHNWSV 72 (258)
T ss_dssp SEEEEEECSTTEEEEEEEE----------CTTSCEEEEEEEE
T ss_pred cEEEEecCCCceEEEEEcc----------CCCCCCeeeccee
Confidence 6899999999999997762 2235677777653
No 124
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=31.41 E-value=87 Score=31.67 Aligned_cols=24 Identities=29% Similarity=0.567 Sum_probs=21.4
Q ss_pred CCceEEEEEcCCCceeeeEEEeeC
Q psy3431 188 GERNVLIFDLGGGTFDVSILSIDE 211 (549)
Q Consensus 188 ~~~~vlv~D~Gggt~dvsv~~~~~ 211 (549)
+...++.+|+||.++-+.+++..+
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEECC
T ss_pred ccceEEEEEeCCCeEEEEEEecCC
Confidence 457789999999999999999976
No 125
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=30.83 E-value=87 Score=27.24 Aligned_cols=96 Identities=9% Similarity=0.161 Sum_probs=47.3
Q ss_pred CCCHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhhccCccChhHHHHHHHHHHHHHHHhhcC-Cc---
Q psy3431 427 RLSKEEIDRMINDAERYKDEDEKQKERISARNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNN-TL--- 502 (549)
Q Consensus 427 ~ls~eei~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~~~e~~~i~~~l~~~~~Wl~~~-~~--- 502 (549)
+++.+-..++....+.+.. +..+..++.|..|+-|+-+++..+..+. ++=|..+.-...++.+=+..+ +.
T Consensus 67 p~~~e~~~~l~~~~~~Lr~--~l~kdlee~r~~l~P~~~e~~~~~~~~~----e~lr~~l~Py~~el~~~~~~~~e~Lr~ 140 (185)
T 3r2p_A 67 PVTQEFWDNLEKETEGLRQ--EMSKDLEEVKAKVQPYLDDFQKKWQEEM----ELYRQKVEPLRAELQEGARQKLHELQE 140 (185)
T ss_dssp SCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred chHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4555544444444443332 3345566677777777777776664321 122333333333333333221 00
Q ss_pred -------CCHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3431 503 -------ADKEEYQDKLQQLQKSCMPLMSKMHG 528 (549)
Q Consensus 503 -------a~~~~~~~kl~~L~~~~~~i~~r~~e 528 (549)
.=..-+.+.+++|+..+.|....+.+
T Consensus 141 ~L~p~~e~lr~~l~~~~e~lk~~l~Py~ee~k~ 173 (185)
T 3r2p_A 141 KLSPLGEEMRDRARAHVDALRTHLAPYSDELRQ 173 (185)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 01123555677777777776665544
No 126
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=28.89 E-value=56 Score=32.57 Aligned_cols=71 Identities=23% Similarity=0.304 Sum_probs=50.6
Q ss_pred CcceEEEEecCCCCHHHHHHHHHHHHHcCCceeEeecchhHH-HHhhhcccCCC-----CCce---------------EE
Q psy3431 135 SVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA-ALAYGLDKNLK-----GERN---------------VL 193 (549)
Q Consensus 135 ~~~~~vitVPa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aa-al~y~~~~~~~-----~~~~---------------vl 193 (549)
-+.++|++.|+.- --.+.-||+++|.+.+.-+--..|. |++||...-.+ .+.+ .+
T Consensus 153 GV~~Iv~~tPp~i----~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G~V 228 (434)
T 1kae_A 153 GCKKVVLCSPPPI----ADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGA 228 (434)
T ss_dssp TCSEEEEEECSSC----CHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTTSC
T ss_pred CCCeEEEECCCCC----CHHHHHHHHHcCCCEEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcCcc
Confidence 4678999999822 2468899999999999999888884 69998753211 1111 13
Q ss_pred EEEcCCCceeeeEEEe
Q psy3431 194 IFDLGGGTFDVSILSI 209 (549)
Q Consensus 194 v~D~Gggt~dvsv~~~ 209 (549)
-+|+=+|-+.+-|+.-
T Consensus 229 gIDm~AGPSEilViAD 244 (434)
T 1kae_A 229 AIDMPAGPSEVLVIAD 244 (434)
T ss_dssp EESCCCCCCEEEEEEC
T ss_pred ccCCCCCCceEEEEeC
Confidence 3788888888888764
No 127
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=28.77 E-value=4.9e+02 Score=26.61 Aligned_cols=91 Identities=16% Similarity=0.114 Sum_probs=47.9
Q ss_pred CcceEEEEe-cCCCCHHHHHHH--HHHHHHcCCceeEeecchhHHHHhhhcccCCCCCceEEEEEcCCCceeeeEEEeeC
Q psy3431 135 SVRDAVITV-PAYFNDAQRQAT--KDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDE 211 (549)
Q Consensus 135 ~~~~~vitV-Pa~f~~~qr~~l--~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~ 211 (549)
.+.-+++|. |.+|+....-.. +.-|...|.+.+. ++.-.|=+++.........+ +++-+-||++.+..+ ..
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~~~p---~~l~vsGg~t~~~~~--~~ 145 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEAEDP---LTLYVSGGNTQVIAY--VS 145 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSCSSC---EEEEECSSCEEEEEE--ET
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCCCCC---cEEEEcCCCcEEEEE--eC
Confidence 456666666 776654432211 1223334655543 45545444333233332233 555566777766544 45
Q ss_pred CcEEEEEEecCCCCCCcchHHH
Q psy3431 212 GALFEVRSTAGDTHLGGEDFDN 233 (549)
Q Consensus 212 ~~~~~v~~~~~d~~lGG~~iD~ 233 (549)
+ .+++++..-|. --|+.||.
T Consensus 146 ~-~~~~lg~t~d~-s~G~~~D~ 165 (540)
T 3en9_A 146 K-KYRVFGETLDI-AVGNCLDQ 165 (540)
T ss_dssp T-EEEEEEEBSSS-CHHHHHHH
T ss_pred C-ceEEEeeccch-HhHHHHHH
Confidence 6 88988877653 34666774
No 128
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=26.53 E-value=3e+02 Score=23.39 Aligned_cols=88 Identities=18% Similarity=0.109 Sum_probs=50.5
Q ss_pred eEEEEEcCCCceeeeEEEeeCCc--EEEEEEecCCCCCCcchHHHHHHHHHHHHHHhccccccccCCCCCChHHHHHHHH
Q psy3431 191 NVLIFDLGGGTFDVSILSIDEGA--LFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKCRSASDVGDHHGDAHFVVQSLL 268 (549)
Q Consensus 191 ~vlv~D~Gggt~dvsv~~~~~~~--~~~v~~~~~d~~lGG~~iD~~l~~~l~~~~~~~~~~~~e~~K~~~~i~~Vi~~~l 268 (549)
.+|-+|-|-..+-..+++..++. .+..+..+.-..-.+.++-++|...... +.++|
T Consensus 2 rILGIDPGl~~tG~gvi~~~g~~~~~~~~v~~G~I~t~~~~~~~~RL~~I~~~----------------------l~~~i 59 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTSPQEPAKERVGRIHAR----------------------VLEVL 59 (166)
T ss_dssp EEEEEECCSSEEEEEEEEECSSSSSCEEEEEEEEEECCTTSCHHHHHHHHHHH----------------------HHHHH
T ss_pred EEEEEccccCceEEEEEEecCCccceEEEEEeCeEECCCCCCHHHHHHHHHHH----------------------HHHHH
Confidence 57889999999999999876541 3444433321222345566665443221 33455
Q ss_pred HhhhCC----CCCCCCCChhhHH----HccHHHHHHHHcC
Q psy3431 269 QNFFCG----KSLNLSINPDEAV----AYGAAVQAAILSG 300 (549)
Q Consensus 269 ~~~f~~----~~~~~~~~~~eav----a~Gaa~~a~~l~~ 300 (549)
.++-+. ..+....|+..+. |+|+++.++...+
T Consensus 60 ~~~~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~g 99 (166)
T 4ep4_A 60 HRFRPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAG 99 (166)
T ss_dssp HHHCCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcC
Confidence 544322 2334456777766 6788877766544
No 129
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=26.36 E-value=2.2e+02 Score=21.78 Aligned_cols=49 Identities=14% Similarity=0.175 Sum_probs=35.1
Q ss_pred cChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy3431 478 LTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGA 530 (549)
Q Consensus 478 ~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~ 530 (549)
+-..+++.+...|++-.+-++. ..+.++.++..++.....+...+++..
T Consensus 58 fv~~~~~e~~~~L~~~~e~i~~----~i~~le~~~~~~~~~l~~lk~~l~~~~ 106 (107)
T 1fxk_A 58 LIRVAKDELTEELQEKLETLQL----REKTIERQEERVMKKLQEMQVNIQEAM 106 (107)
T ss_dssp EEEECHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHhccHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455677777777777777764 566778888888888888877776654
No 130
>1h7c_A Tubulin-specific chaperone A; protein folding, cofactor A; 1.8A {Homo sapiens} SCOP: a.7.5.1
Probab=26.33 E-value=1.5e+02 Score=23.29 Aligned_cols=40 Identities=20% Similarity=0.282 Sum_probs=29.6
Q ss_pred cChhHHHHHHHHHHHHHHHhhcCC-cCCHHHHHHHHHHHHH
Q psy3431 478 LTESEKSRCREECDATLKWLDNNT-LADKEEYQDKLQQLQK 517 (549)
Q Consensus 478 ~~~~e~~~i~~~l~~~~~Wl~~~~-~a~~~~~~~kl~~L~~ 517 (549)
+-|+=+..|.+.+.++.++|.++. ....++|.+....|.+
T Consensus 63 mipd~~~Rl~~a~~~L~~~l~~e~~~~~~ee~~~Ake~l~~ 103 (108)
T 1h7c_A 63 MIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDS 103 (108)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHCGGGTTSHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHH
Confidence 345667789999999999998553 3567788777766654
No 131
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=26.17 E-value=2e+02 Score=30.16 Aligned_cols=62 Identities=8% Similarity=0.177 Sum_probs=36.0
Q ss_pred hhhHHHHHHHHHHHhhhccCccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHHH
Q psy3431 457 RNNLEAYVFNVKQALDDAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSK 525 (549)
Q Consensus 457 ~N~LE~~iy~~r~~l~~~~~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~r 525 (549)
...++.-+-.+..+++.+...+-.+....+..+|++-.+.|.++ |+++.+.|++.++.+..+
T Consensus 521 ~~~~~e~~~ql~~kme~~~~~~~~e~~~~~~~~~~~~~~~~~~g-------~~~~~~~~~~ei~~l~~~ 582 (592)
T 1f5n_A 521 ERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEG-------FQKESRIMKNEIQDLQTK 582 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHh
Confidence 33455555566666665443333445556777788888888876 344444555555544444
No 132
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=26.02 E-value=77 Score=29.97 Aligned_cols=20 Identities=30% Similarity=0.346 Sum_probs=17.5
Q ss_pred EEEEEcCccceEEEEEECCe
Q psy3431 3 AIGIDLGTTYSCVAVFQQGK 22 (549)
Q Consensus 3 vvGID~Gtt~s~va~~~~g~ 22 (549)
.|+||.||||..+-.+.+|.
T Consensus 8 ~IavDWGTs~lRa~l~~~g~ 27 (295)
T 3nuw_A 8 YIAIDWGSTNLRAWLYQGEE 27 (295)
T ss_dssp EEEEEECSSCEEEEEEETTE
T ss_pred EEEEEecchheeeeeecCCc
Confidence 79999999999998887664
No 133
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=24.98 E-value=83 Score=31.25 Aligned_cols=73 Identities=25% Similarity=0.348 Sum_probs=50.8
Q ss_pred cceEEEEecCCCCHHHHHHHHHHHHHcCCceeEeecchhH-HHHhhhcccCCC-----CCc------------eEEEEEc
Q psy3431 136 VRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTA-AALAYGLDKNLK-----GER------------NVLIFDL 197 (549)
Q Consensus 136 ~~~~vitVPa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~A-aal~y~~~~~~~-----~~~------------~vlv~D~ 197 (549)
+.++|++.|+. +..---.+.-||+++|.+.+.-+--..| ||++||...-.+ .+. ..+-+|+
T Consensus 160 V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g~VgIDm 238 (423)
T 4gic_A 160 VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFGQVGIDM 238 (423)
T ss_dssp CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBTTBEECC
T ss_pred CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcCCcCccc
Confidence 66789999983 2222346899999999999988888888 468998763211 011 1145788
Q ss_pred CCCceeeeEEEe
Q psy3431 198 GGGTFDVSILSI 209 (549)
Q Consensus 198 Gggt~dvsv~~~ 209 (549)
=+|-+.+.|+.-
T Consensus 239 ~AGPSEilViAD 250 (423)
T 4gic_A 239 VAGPSEILVISD 250 (423)
T ss_dssp CCCCCEEEEEEC
T ss_pred ccccceEEEEeC
Confidence 888888887764
No 134
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=24.22 E-value=3.4e+02 Score=25.13 Aligned_cols=100 Identities=13% Similarity=0.207 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhh--hhHHHHHHHHHhhhHHHHHHHHHHHhhhcc-------CccChhHHHHHHHHHHHHHHHhhcC
Q psy3431 430 KEEIDRMINDAERYKD--EDEKQKERISARNNLEAYVFNVKQALDDAG-------NKLTESEKSRCREECDATLKWLDNN 500 (549)
Q Consensus 430 ~eei~~~~~~~~~~~~--~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~-------~~~~~~e~~~i~~~l~~~~~Wl~~~ 500 (549)
...++.+...+.-+.. .++......+.|..|.-|.-++|..+.... ....++=+.++...+..+..=|..+
T Consensus 87 ~~~~eeLr~~L~p~~eelr~kl~~~veelk~~L~Py~eelr~k~~~~leeLr~~l~P~ae~~~~kl~~~~e~L~~ql~~~ 166 (273)
T 3s84_A 87 RENADSLQASLRPHADELKAKIDQNVEELKGRLTPYADEFKVKIDQTVEELRRSLAPYAQDTQEKLNHQLEGLTFQMKKN 166 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCSSCHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy3431 501 TLADKEEYQDKLQQLQKSCMPLMSKMHGG 529 (549)
Q Consensus 501 ~~a~~~~~~~kl~~L~~~~~~i~~r~~e~ 529 (549)
...-.+-+....++|+..+.|....+.+.
T Consensus 167 a~~L~~~l~~~~eeLr~~L~p~ae~lr~~ 195 (273)
T 3s84_A 167 AEELKARISASAEELRQRLAPLAEDVRGN 195 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 135
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=23.28 E-value=3.2e+02 Score=23.47 Aligned_cols=50 Identities=24% Similarity=0.221 Sum_probs=31.6
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhhhcc----Ccc---ChhHHHHHHHHHHHHHHHhh
Q psy3431 449 KQKERISARNNLEAYVFNVKQALDDAG----NKL---TESEKSRCREECDATLKWLD 498 (549)
Q Consensus 449 ~~~~~~~a~N~LE~~iy~~r~~l~~~~----~~~---~~~e~~~i~~~l~~~~~Wl~ 498 (549)
..+...+.|..|+-|.-++|..+...- ..+ .++=+.++...++++..+|.
T Consensus 109 ~~~~~e~lr~~l~Py~~el~~~~~~~~e~Lr~~L~p~~e~lr~~l~~~~e~lk~~l~ 165 (185)
T 3r2p_A 109 WQEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLA 165 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345566788899999999998886433 112 23335556666666665553
No 136
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=22.46 E-value=2.2e+02 Score=20.48 Aligned_cols=36 Identities=14% Similarity=0.180 Sum_probs=22.6
Q ss_pred HHHHhhhhhhHHHHHHHHHhhhHHHHHHHHHHHhhh
Q psy3431 438 NDAERYKDEDEKQKERISARNNLEAYVFNVKQALDD 473 (549)
Q Consensus 438 ~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~ 473 (549)
.+.+++...|...++.+......|+-|-++++.|+.
T Consensus 30 ~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK 65 (72)
T 3nmd_A 30 EKIEELRQRDALIDELELELDQKDELIQMLQNELDK 65 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666666666666666667777666666653
No 137
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=22.18 E-value=3e+02 Score=21.86 Aligned_cols=38 Identities=11% Similarity=0.059 Sum_probs=27.8
Q ss_pred hhHHHHHHHHHHHHHHHhhc--C-CcCCHHHHHHHHHHHHH
Q psy3431 480 ESEKSRCREECDATLKWLDN--N-TLADKEEYQDKLQQLQK 517 (549)
Q Consensus 480 ~~e~~~i~~~l~~~~~Wl~~--~-~~a~~~~~~~kl~~L~~ 517 (549)
|+=+..|...+.++++||.+ + ...+.++|.....-|.+
T Consensus 66 pd~~~RL~~a~~~L~~~l~~~~~~~~~~~ee~~~Ak~~l~~ 106 (116)
T 3mxz_A 66 PDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVAD 106 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC-CCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHH
Confidence 56677899999999999984 2 23567788777666653
No 138
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=22.08 E-value=49 Score=32.39 Aligned_cols=19 Identities=16% Similarity=0.151 Sum_probs=16.7
Q ss_pred CEEEEEcCccceEEEEEEC
Q psy3431 2 PAIGIDLGTTYSCVAVFQQ 20 (549)
Q Consensus 2 ~vvGID~Gtt~s~va~~~~ 20 (549)
.++|||+|.|++.++++..
T Consensus 30 ~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 30 LTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp EEEEEEECSSEEEEEEEEE
T ss_pred eEEEEEEccccEEEEEEec
Confidence 4899999999999998753
No 139
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=22.07 E-value=55 Score=29.70 Aligned_cols=34 Identities=26% Similarity=0.286 Sum_probs=30.5
Q ss_pred ecCCCCHHHHHHHHHHHHHcCCceeEeecchhHH
Q psy3431 143 VPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 176 (549)
Q Consensus 143 VPa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aa 176 (549)
-|..++--||+.+.-|...+.=+.+-|++||+++
T Consensus 142 ~~~~LSgGq~QRv~iAral~~~p~llllDEPts~ 175 (235)
T 3tif_A 142 KPNQLSGGQQQRVAIARALANNPPIILADQPTWA 175 (235)
T ss_dssp CGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTT
T ss_pred ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 4788999999999999888888889999999986
No 140
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=21.79 E-value=3.6e+02 Score=22.62 Aligned_cols=43 Identities=14% Similarity=0.100 Sum_probs=28.8
Q ss_pred eEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHH
Q psy3431 191 NVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRL 235 (549)
Q Consensus 191 ~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l 235 (549)
.+|-+|-|-..+-.++++..++ .++.+..+.- ...+.++-.+|
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~-~~~~v~~G~i-~t~~~~~~~Rl 44 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGR-QLSYLGSGCI-RTKVDDLPSRL 44 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETT-EEEEEEEEEE-ECCCSCHHHHH
T ss_pred EEEEEccCCCCeeEEEEEecCC-eEEEEEeeEE-ECCCCCHHHHH
Confidence 5788999999999999998766 6666544331 11134555554
No 141
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=21.76 E-value=2.2e+02 Score=25.82 Aligned_cols=71 Identities=17% Similarity=0.155 Sum_probs=39.1
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhcc-------CccChhHHHHHHHHHHHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHH
Q psy3431 452 ERISARNNLEAYVFNVKQALDDAG-------NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPL 522 (549)
Q Consensus 452 ~~~~a~N~LE~~iy~~r~~l~~~~-------~~~~~~e~~~i~~~l~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i 522 (549)
...+.|..|+-|+-++|..+..+. ....++=+.++...++++..-|.--...=...+.+++++|+..+.|.
T Consensus 111 ~~eelr~~L~P~~eel~~~~~~~~eel~~~L~p~~eelr~kl~~~veelk~~l~P~~ee~r~kl~~~~~el~~~l~p~ 188 (243)
T 2a01_A 111 EMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGGAR 188 (243)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcchh
Confidence 344567777777777777664432 23345556777777777777664210011223444555566655543
No 142
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=21.74 E-value=66 Score=29.24 Aligned_cols=33 Identities=12% Similarity=0.191 Sum_probs=30.0
Q ss_pred cCCCCHHHHHHHHHHHHHcCCceeEeecchhHH
Q psy3431 144 PAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 176 (549)
Q Consensus 144 Pa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aa 176 (549)
|...+.-||+.+.-|...+.=+.+-|++||+++
T Consensus 137 ~~~LSgGq~qrv~lAraL~~~p~lllLDEPts~ 169 (240)
T 1ji0_A 137 GGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLG 169 (240)
T ss_dssp SSSSCHHHHHHHHHHHHHTTCCSEEEEECTTTT
T ss_pred hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCccc
Confidence 778999999999999889988889999999986
No 143
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=21.61 E-value=52 Score=29.62 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=30.3
Q ss_pred ecCCCCHHHHHHHHHHHHHcCCceeEeecchhHH
Q psy3431 143 VPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 176 (549)
Q Consensus 143 VPa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aa 176 (549)
-|..++.-||+.+.-|...+.=+.+-|++||+++
T Consensus 137 ~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~ 170 (224)
T 2pcj_A 137 KPYELSGGEQQRVAIARALANEPILLFADEPTGN 170 (224)
T ss_dssp CGGGSCHHHHHHHHHHHHTTTCCSEEEEESTTTT
T ss_pred ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCC
Confidence 4788999999999999888888889999999975
No 144
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=20.66 E-value=1.4e+02 Score=23.83 Aligned_cols=44 Identities=9% Similarity=0.136 Sum_probs=32.1
Q ss_pred EEEEEeCC-CccEEEEEEecCCCCceeEEEecCCCCCCHHHHHHHHHHHHhhh
Q psy3431 393 DVTFDLDA-NGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYK 444 (549)
Q Consensus 393 ~v~~~~d~-~g~l~v~~~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~ 444 (549)
.+.|.+|. .|.+.|...|..||+... .++.+++-++...+.++.
T Consensus 57 ~L~F~vdee~~~~vVkVvD~~TgEVIR--------qIPpEe~L~l~~~l~e~~ 101 (117)
T 2hc5_A 57 HLKFELHDKLNEYYVKVIEDSTNEVIR--------EIPPKRWLDFYAAMTEFL 101 (117)
T ss_dssp CEEEEEEEETTEEEEEEEETTTTEEEE--------EECHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCcEEEEEEECCCCcEEE--------eCChHHHHHHHHHHHHhh
Confidence 47788876 478999999999987532 256788777777666543
No 145
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=20.58 E-value=2.2e+02 Score=28.91 Aligned_cols=20 Identities=10% Similarity=0.145 Sum_probs=12.3
Q ss_pred HHHhhhHHHHHHHHHHHhhh
Q psy3431 454 ISARNNLEAYVFNVKQALDD 473 (549)
Q Consensus 454 ~~a~N~LE~~iy~~r~~l~~ 473 (549)
...+++.++|+..+.+.|..
T Consensus 77 sKnsKdseqy~k~~~E~Lr~ 96 (562)
T 3ghg_A 77 QKNNKDSHSLTTNIMEILRG 96 (562)
T ss_dssp HHHHHHHHHHHHHHHHTTSS
T ss_pred HhhchhHHHHHHHHHHHHHH
Confidence 44566667776666666643
No 146
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=20.49 E-value=2.5e+02 Score=26.31 Aligned_cols=52 Identities=19% Similarity=0.326 Sum_probs=32.2
Q ss_pred ceEEEEEcCCCceeeeEEEeeCCcEEEEEEecCCCCCCcchHHHHHHHHHHHH
Q psy3431 190 RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242 (549)
Q Consensus 190 ~~vlv~D~Gggt~dvsv~~~~~~~~~~v~~~~~d~~lGG~~iD~~l~~~l~~~ 242 (549)
..++.+|+|+.++.+.++..... .+...........+...+-..+.+.+.+-
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~-il~~~~~~~~~~~~~~~~~~~l~~~i~~~ 57 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGV-VQQKWSIETNILEDGKHIVPSIIESIRHR 57 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC-EEEEEEEECCCTTTTTTHHHHHHHHHHHH
T ss_pred cEEEEEEECCCEEEEEEECCCCC-EEEEEEEcCCCCCCHHHHHHHHHHHHHHH
Confidence 57899999999999999987544 44333333323334455555555544443
No 147
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=20.44 E-value=59 Score=30.33 Aligned_cols=29 Identities=7% Similarity=0.003 Sum_probs=18.9
Q ss_pred CcceEEEEecCCCCHHHHHHHHHHHHHc-CCce
Q psy3431 135 SVRDAVITVPAYFNDAQRQATKDAGAIA-GLNV 166 (549)
Q Consensus 135 ~~~~~vitVPa~f~~~qr~~l~~Aa~~A-Gl~~ 166 (549)
.+..++|+.+. +.....++.+++.. +.++
T Consensus 56 ~i~~iiISSVv---p~~~~~l~~~~~~~~~~~~ 85 (268)
T 2h3g_X 56 DVKGIIVSSVV---PPIMFALERMCEKYFKIKP 85 (268)
T ss_dssp GCCEEEEEESC---HHHHHHHHHHHHHHTCCCC
T ss_pred cCcEEEEEccC---hhHHHHHHHHHHHHhCCCe
Confidence 46778888774 56666677666654 5554
No 148
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=20.29 E-value=2.2e+02 Score=28.59 Aligned_cols=25 Identities=32% Similarity=0.659 Sum_probs=22.1
Q ss_pred CCceEEEEEcCCCceeeeEEEeeCC
Q psy3431 188 GERNVLIFDLGGGTFDVSILSIDEG 212 (549)
Q Consensus 188 ~~~~vlv~D~Gggt~dvsv~~~~~~ 212 (549)
+...+|.+|+||.++-|.++++.++
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~ 81 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG 81 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc
Confidence 4567999999999999999999665
No 149
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=20.13 E-value=1.8e+02 Score=21.82 Aligned_cols=41 Identities=17% Similarity=0.062 Sum_probs=35.0
Q ss_pred CcceEEEEecCCCCHHHHHHHHHHHHHcCCceeEeecchhH
Q psy3431 135 SVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTA 175 (549)
Q Consensus 135 ~~~~~vitVPa~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~A 175 (549)
+-..++|..-..-....--.+.++++.||+..+.|+.+|..
T Consensus 56 ~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~~~v~l~t~~~~ 96 (99)
T 2pfu_A 56 KDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETA 96 (99)
T ss_dssp CSSCEEEEECTTCCHHHHHHHHHHHHHTCCCCEECTTCCCC
T ss_pred CCceEEEEcCCCCCHHHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 34568888888888888999999999999999999988754
No 150
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=20.05 E-value=59 Score=33.76 Aligned_cols=30 Identities=10% Similarity=0.034 Sum_probs=24.8
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHcCCcee
Q psy3431 138 DAVITVPAYFNDAQRQATKDAGAIAGLNVM 167 (549)
Q Consensus 138 ~~vitVPa~f~~~qr~~l~~Aa~~AGl~~~ 167 (549)
.++.-+|..++...-.++.+++...|+++.
T Consensus 132 ~~I~v~~~~i~~~d~a~~in~a~~~g~~i~ 161 (607)
T 1nbw_A 132 GWIVLIDDAVDFLDAVWWLNEALDRGINVV 161 (607)
T ss_dssp CEEEEECSSSCHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEECCCccCHHHHHHHHHHHHHcCCcEE
Confidence 344458999999999999999999998554
Done!