BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3437
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A5A763|SOX10_PIG Transcription factor SOX-10 OS=Sus scrofa GN=SOX10 PE=2 SV=1
Length = 469
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 66/95 (69%), Gaps = 20/95 (21%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 111 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 150
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSK 95
SDK+PFIEEAERLR HK +HP+YKYQPRRRK K
Sbjct: 151 SDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 185
>sp|P56693|SOX10_HUMAN Transcription factor SOX-10 OS=Homo sapiens GN=SOX10 PE=1 SV=1
Length = 466
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 66/95 (69%), Gaps = 20/95 (21%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 108 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 147
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSK 95
SDK+PFIEEAERLR HK +HP+YKYQPRRRK K
Sbjct: 148 SDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 182
>sp|Q04888|SOX10_MOUSE Transcription factor SOX-10 OS=Mus musculus GN=Sox10 PE=2 SV=2
Length = 466
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 66/95 (69%), Gaps = 20/95 (21%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 108 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 147
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSK 95
SDK+PFIEEAERLR HK +HP+YKYQPRRRK K
Sbjct: 148 SDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 182
>sp|Q9W757|SOX10_CHICK Transcription factor SOX-10 OS=Gallus gallus GN=SOX10 PE=2 SV=2
Length = 461
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 66/95 (69%), Gaps = 20/95 (21%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 102 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 141
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSK 95
SDK+PFIEEAERLR HK +HP+YKYQPRRRK K
Sbjct: 142 SDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
>sp|O55170|SOX10_RAT Transcription factor SOX-10 OS=Rattus norvegicus GN=Sox10 PE=1 SV=1
Length = 466
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 66/95 (69%), Gaps = 20/95 (21%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 108 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 147
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSK 95
SDK+PFIEEAERLR HK +HP+YKYQPRRRK K
Sbjct: 148 SDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 182
>sp|Q04887|SOX9_MOUSE Transcription factor SOX-9 OS=Mus musculus GN=Sox9 PE=2 SV=2
Length = 507
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 71/108 (65%), Gaps = 20/108 (18%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 109 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 148
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKST 108
S+K+PF+EEAERLR HK +HP+YKYQPRRRK KN A ++ T
Sbjct: 149 SEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQT 196
>sp|Q9BG91|SOX9_CALJA Transcription factor SOX-9 OS=Callithrix jacchus GN=SOX9 PE=2 SV=1
Length = 509
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 71/108 (65%), Gaps = 20/108 (18%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 109 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 148
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKST 108
S+K+PF+EEAERLR HK +HP+YKYQPRRRK KN A ++ T
Sbjct: 149 SEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQT 196
>sp|Q8AXX8|SOX10_XENLA Transcription factor Sox-10 OS=Xenopus laevis GN=sox10 PE=1 SV=1
Length = 446
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 73/115 (63%), Gaps = 20/115 (17%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 102 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 141
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKSTSSINSLK 115
+DK+PFIEEAERLR HK +HP+YKYQPRRRK K + S++ S++
Sbjct: 142 NDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKPSPGEGDGSSEAEGGAASIQ 196
>sp|O18896|SOX9_PIG Transcription factor SOX-9 OS=Sus scrofa GN=SOX9 PE=2 SV=1
Length = 509
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 71/108 (65%), Gaps = 20/108 (18%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 109 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 148
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKST 108
S+K+PF+EEAERLR HK +HP+YKYQPRRRK KN A ++ T
Sbjct: 149 SEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQT 196
>sp|P61754|SOX9_PONPY Transcription factor SOX-9 OS=Pongo pygmaeus GN=SOX9 PE=2 SV=1
Length = 509
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 71/108 (65%), Gaps = 20/108 (18%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 109 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 148
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKST 108
S+K+PF+EEAERLR HK +HP+YKYQPRRRK KN A ++ T
Sbjct: 149 SEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQT 196
>sp|P61753|SOX9_MACMU Transcription factor SOX-9 OS=Macaca mulatta GN=SOX9 PE=2 SV=1
Length = 509
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 71/108 (65%), Gaps = 20/108 (18%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 109 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 148
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKST 108
S+K+PF+EEAERLR HK +HP+YKYQPRRRK KN A ++ T
Sbjct: 149 SEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQT 196
>sp|P48436|SOX9_HUMAN Transcription factor SOX-9 OS=Homo sapiens GN=SOX9 PE=1 SV=1
Length = 509
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 71/108 (65%), Gaps = 20/108 (18%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 109 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 148
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKST 108
S+K+PF+EEAERLR HK +HP+YKYQPRRRK KN A ++ T
Sbjct: 149 SEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQT 196
>sp|Q7YRJ7|SOX9_CANFA Transcription factor SOX-9 OS=Canis familiaris GN=SOX9 PE=2 SV=1
Length = 513
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 71/108 (65%), Gaps = 20/108 (18%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 109 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 148
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKST 108
S+K+PF+EEAERLR HK +HP+YKYQPRRRK KN A ++ T
Sbjct: 149 SEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQT 196
>sp|A4IIJ8|SOX10_XENTR Transcription factor Sox-10 OS=Xenopus tropicalis GN=sox10 PE=2
SV=1
Length = 436
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 73/115 (63%), Gaps = 20/115 (17%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 94 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 133
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKSTSSINSLK 115
+DK+PFIEEAERLR HK +HP+YKYQPRRRK K + S++ S++
Sbjct: 134 NDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKPNPGEGDGSSEAEGGAASIQ 188
>sp|P48434|SOX9_CHICK Transcription factor SOX-9 OS=Gallus gallus GN=SOX9 PE=2 SV=2
Length = 494
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 67/96 (69%), Gaps = 20/96 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 110 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 149
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKN 96
S+K+PF+EEAERLR HK +HP+YKYQPRRRK KN
Sbjct: 150 SEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKTVKN 185
>sp|Q9BG89|SOX9_PANTR Transcription factor SOX-9 OS=Pan troglodytes GN=SOX9 PE=2 SV=1
Length = 509
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 70/108 (64%), Gaps = 20/108 (18%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR L +QYP LHNAELSKTLG LW+ L++
Sbjct: 109 MNAFMVWAQAARRKLGDQYPHLHNAELSKTLGKLWRL--------------------LNE 148
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKST 108
S+K+PF+EEAERLR HK +HP+YKYQPRRRK KN A ++ T
Sbjct: 149 SEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQT 196
>sp|B7ZR65|SOX9A_XENLA Transcription factor Sox-9-A OS=Xenopus laevis GN=sox9-a PE=1 SV=1
Length = 477
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 71/108 (65%), Gaps = 20/108 (18%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 109 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 148
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKST 108
+K+PF+EEAERLR HK +HP+YKYQPRRRK KN T + ++ T
Sbjct: 149 GEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQTEQEDGAEQT 196
>sp|Q04886|SOX8_MOUSE Transcription factor SOX-8 OS=Mus musculus GN=Sox8 PE=2 SV=2
Length = 464
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 66/95 (69%), Gaps = 20/95 (21%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ LS+
Sbjct: 103 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LSE 142
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSK 95
S+K+PF+EEAERLR HK +HP+YKYQPRRRK K
Sbjct: 143 SEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK 177
>sp|Q6DFF5|SOX9B_XENLA Transcription factor Sox-9-B OS=Xenopus laevis GN=sox9-b PE=2 SV=1
Length = 476
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 72/108 (66%), Gaps = 20/108 (18%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 109 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 148
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKST 108
+K+PF+EEAERLR HK +HP+YKYQPRRRK KN + ++ ++ T
Sbjct: 149 GEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSEQDDSAEQT 196
>sp|Q6F2E7|SOX9_XENTR Transcription factor Sox-9 OS=Xenopus tropicalis GN=sox9 PE=1 SV=1
Length = 482
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 66/96 (68%), Gaps = 20/96 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ L++
Sbjct: 109 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LNE 148
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKN 96
+K+PF+EEAERLR HK +HP+YKYQPRRRK KN
Sbjct: 149 GEKRPFVEEAERLRIQHKKDHPDYKYQPRRRKSVKN 184
>sp|P57073|SOX8_HUMAN Transcription factor SOX-8 OS=Homo sapiens GN=SOX8 PE=2 SV=1
Length = 446
Score = 115 bits (288), Expect = 8e-26, Method: Composition-based stats.
Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 20/95 (21%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ LS+
Sbjct: 106 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LSE 145
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSK 95
S+K+PF+EEAERLR HK +HP+YKYQPRRRK +K
Sbjct: 146 SEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAK 180
>sp|P57074|SOX8_CHICK Transcription factor SOX-8 OS=Gallus gallus GN=SOX8 PE=2 SV=1
Length = 470
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 66/95 (69%), Gaps = 20/95 (21%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ LS+
Sbjct: 113 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LSE 152
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSK 95
++K+PF+EEAERLR HK +HP+YKYQPRRRK K
Sbjct: 153 NEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK 187
>sp|Q6IZ48|SOX8_TETNG Transcription factor Sox-8 OS=Tetraodon nigroviridis GN=sox8 PE=2
SV=2
Length = 462
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 65/92 (70%), Gaps = 20/92 (21%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ LS+
Sbjct: 104 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LSE 143
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRK 92
S+K+PF++EAERLR HK +HP+YKYQPRRRK
Sbjct: 144 SEKRPFVDEAERLRIQHKKDHPDYKYQPRRRK 175
>sp|Q6VVD7|SOX8_XENLA Transcription factor Sox-8 OS=Xenopus laevis GN=sox8 PE=2 SV=1
Length = 459
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 66/95 (69%), Gaps = 20/95 (21%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWAQAARR LA+QYP LHNAELSKTLG LW+ LS+
Sbjct: 102 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRL--------------------LSE 141
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSK 95
++K+PF+EEAERLR HK +HP+YKYQPRRRK K
Sbjct: 142 NEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK 176
>sp|P40657|SOX15_DROME Putative transcription factor SOX-15 OS=Drosophila melanogaster
GN=Sox15 PE=2 SV=2
Length = 784
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 68/117 (58%), Gaps = 20/117 (17%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA++ P LHNA+LSK LG W++L +
Sbjct: 219 MNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQ------------------- 259
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKSTSSINSLKKG 117
D++P++EEAERLR IH +EHPNYKY+PRRRK SK +S SS N G
Sbjct: 260 -DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGG 315
>sp|Q9H6I2|SOX17_HUMAN Transcription factor SOX-17 OS=Homo sapiens GN=SOX17 PE=1 SV=1
Length = 414
Score = 99.8 bits (247), Expect = 4e-21, Method: Composition-based stats.
Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 20/97 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNAELSK LG WK L +
Sbjct: 72 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTL-------------------- 111
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNL 97
++K+PF+EEAERLR H +HPNYKY+PRRRK K L
Sbjct: 112 AEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRL 148
>sp|Q61473|SOX17_MOUSE Transcription factor SOX-17 OS=Mus musculus GN=Sox17 PE=1 SV=1
Length = 419
Score = 99.8 bits (247), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 20/97 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNAELSK LG WK L +
Sbjct: 72 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTL-------------------- 111
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNL 97
++K+PF+EEAERLR H +HPNYKY+PRRRK K +
Sbjct: 112 AEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRM 148
>sp|Q90ZH9|S17AB_XENLA Transcription factor Sox-17-alpha-B OS=Xenopus laevis GN=sox17a-b
PE=1 SV=1
Length = 377
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 65/117 (55%), Gaps = 20/117 (17%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNAELSK LG WK L +
Sbjct: 62 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSL-------------------- 101
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSKSTSSINSLKKG 117
++K+PF+EEAERLR H +HPNYKY+PRRRK K + + N T + S G
Sbjct: 102 AEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRMKRAENGFMHMTEAQESAVMG 158
>sp|Q3KQ35|S17AA_XENLA Transcription factor Sox-17-alpha-A OS=Xenopus laevis GN=sox17a-a
PE=1 SV=1
Length = 380
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 20/104 (19%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNAELSK LG WK+L +
Sbjct: 65 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTL-------------------- 104
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNL 104
++K+PF+EEAERLR H +HPNYKY+PRRRK K + + N
Sbjct: 105 AEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRMKRAENGF 148
>sp|Q8AWH3|SX17A_XENTR Transcription factor Sox-17-alpha OS=Xenopus tropicalis GN=sox17a
PE=2 SV=1
Length = 383
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 20/97 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNAELSK LG WK L +
Sbjct: 65 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTL-------------------- 104
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNL 97
++K+PF+EEAERLR H +HPNYKY+PRRRK K +
Sbjct: 105 AEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRM 141
>sp|B3DLD3|SOX18_XENTR Transcription factor Sox-18 OS=Xenopus tropicalis GN=sox18 PE=2
SV=1
Length = 362
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 20/97 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNA LSK LG WK L S
Sbjct: 72 MNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNL--------------------SS 111
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNL 97
++K+PF+EEAERLR H +HPNYKY+PRR+K +K L
Sbjct: 112 AEKRPFVEEAERLRVQHLQDHPNYKYRPRRKKQAKKL 148
>sp|Q06831|SOX4_MOUSE Transcription factor SOX-4 OS=Mus musculus GN=Sox4 PE=1 SV=2
Length = 440
Score = 92.0 bits (227), Expect = 9e-19, Method: Composition-based stats.
Identities = 48/106 (45%), Positives = 62/106 (58%), Gaps = 20/106 (18%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVW+Q RR + Q P +HNAE+SK LG WK LK D
Sbjct: 63 MNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLK--------------------D 102
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLGTSANNLSK 106
SDK PFI+EAERLR H +++P+YKY+PR++ S N G + +K
Sbjct: 103 SDKIPFIQEAERLRLKHMADYPDYKYRPRKKVKSGNAGAGSAATAK 148
>sp|A5D8R3|S17B3_XENLA Transcription factor Sox-17-beta.3 OS=Xenopus laevis GN=sox17b.3
PE=2 SV=1
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 26/124 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNAELSK LG WK+L + T
Sbjct: 62 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLNLAT------------------ 103
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNLG------TSANNLSKSTSSINSL 114
K+PF+EEAERLR H ++P+YKY+PRR+K K + + N+ + +N++
Sbjct: 104 --KRPFVEEAERLRVQHIQDYPDYKYRPRRKKQVKRMKREEECFFPSANIPGPEAMVNNV 161
Query: 115 KKGQ 118
GQ
Sbjct: 162 MVGQ 165
>sp|O42601|S17B1_XENLA Transcription factor Sox-17-beta.1 OS=Xenopus laevis GN=sox17b.1
PE=1 SV=1
Length = 373
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 20/97 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNAELSK LG WK+L + T
Sbjct: 62 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLAT------------------ 103
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNL 97
K+PF+EEAERLR H ++P+YKY+PRR+K K +
Sbjct: 104 --KRPFVEEAERLRVQHIQDYPDYKYRPRRKKQVKRM 138
>sp|Q90ZH7|SX18B_XENLA Transcription factor Sox-18B OS=Xenopus laevis GN=sox18-b PE=1 SV=1
Length = 361
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 59/97 (60%), Gaps = 20/97 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNA LSK LG WK L +
Sbjct: 70 MNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNL--------------------TS 109
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNL 97
++K+PF+EEAERLR H +HPNYKY+PRR+K +K L
Sbjct: 110 AEKRPFVEEAERLRVQHLQDHPNYKYRPRRKKQAKKL 146
>sp|P55863|SOX3A_XENLA Transcription factor Sox-3-A OS=Xenopus laevis GN=sox3-a PE=1 SV=1
Length = 309
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 20/90 (22%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVW++ RR +A + P +HN+E+SK LG WK L SD
Sbjct: 44 MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLL--------------------SD 83
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRR 90
SDK+PFI+EA+RLR +H ++P+YKY+PRR
Sbjct: 84 SDKRPFIDEAKRLRAVHMKDYPDYKYRPRR 113
>sp|P36395|SRY_SMIMA Sex-determining region Y protein OS=Sminthopsis macroura GN=SRY
PE=2 SV=1
Length = 208
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 75/128 (58%), Gaps = 25/128 (19%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVW+Q RR +A Q P +HN+E+SK LGV WK LSD
Sbjct: 39 MNAFMVWSQTQRRKVALQNPKMHNSEISKQLGVTWKL--------------------LSD 78
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCS--KNLGTSANNLSKSTSSINSLKKGQ 118
S+K+PFI+EA+RLR HK + +YKYQPRR+ S KN+ ++L+K+T + +K
Sbjct: 79 SEKRPFIDEAKRLRDKHK-QVSDYKYQPRRKTKSFLKNVYNHKDHLTKATDQL--IKTQH 135
Query: 119 LNEQSLQI 126
L E S I
Sbjct: 136 LKEDSTTI 143
>sp|Q7SZS1|SX21A_DANRE Transcription factor Sox-21-A OS=Danio rerio GN=sox21a PE=2 SV=1
Length = 239
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 61/97 (62%), Gaps = 22/97 (22%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVW++A RR +A P +HN+E+SK LG WK L SD
Sbjct: 12 MNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLL--------------------SD 51
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNL 97
S+K+PFI+EA+RLR +H EHP+YKY+PRR+ KNL
Sbjct: 52 SEKRPFIDEAKRLRAVHMKEHPDYKYRPRRK--PKNL 86
>sp|Q90ZH8|SX18A_XENLA Transcription factor Sox-18A OS=Xenopus laevis GN=sox18-a PE=1 SV=1
Length = 363
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 58/97 (59%), Gaps = 20/97 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNA LSK LG WK L +
Sbjct: 72 MNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNL--------------------TS 111
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNL 97
+K+PF+EEAERLR H +HPNYKY+PRR+K +K L
Sbjct: 112 VEKRPFVEEAERLRVQHLQDHPNYKYRPRRKKQAKKL 148
>sp|Q6P0E1|SOX2_DANRE Transcription factor Sox-2 OS=Danio rerio GN=sox2 PE=2 SV=1
Length = 315
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 20/91 (21%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVW++ RR +A + P +HN+E+SK LG WK L S+
Sbjct: 42 MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLL--------------------SE 81
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRR 91
S+K+PFI+EA+RLR +H EHP+YKY+PRR+
Sbjct: 82 SEKRPFIDEAKRLRALHMKEHPDYKYRPRRK 112
>sp|Q6RVD7|SX21B_DANRE Transcription factor Sox-21-B OS=Danio rerio GN=sox21b PE=2 SV=1
Length = 245
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 71/127 (55%), Gaps = 26/127 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVW++A RR +A + P +HN+E+SK LG WK L ++
Sbjct: 12 MNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLL--------------------TE 51
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRR-----KCSKNLGTSANNLSKSTS-SINSL 114
S+K+PFI+EA+RLR +H EHP+YKY+PRR+ K K A NL + + + L
Sbjct: 52 SEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFAFPVAYNLGEHEALKVGGL 111
Query: 115 KKGQLNE 121
G L E
Sbjct: 112 PAGALTE 118
>sp|O42342|SOX7_XENLA Transcription factor Sox-7 OS=Xenopus laevis GN=sox7 PE=2 SV=1
Length = 362
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 67/117 (57%), Gaps = 26/117 (22%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNAELSK LG WK LS
Sbjct: 46 MNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKA--------------------LSP 85
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRK-----CSK-NLGTSANNLSKSTSSI 111
+ K+P++EEAERLR H ++PNYKY+PRR+K C + + G +LSK +S+
Sbjct: 86 AQKRPYVEEAERLRVQHMQDYPNYKYRPRRKKQIKRICKRVDTGFLLGSLSKDQNSV 142
>sp|Q68FA4|SOX3_XENTR Transcription factor Sox-3 OS=Xenopus tropicalis GN=sox3 PE=2 SV=1
Length = 307
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 20/90 (22%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVW++ RR +A + P +HN+E+SK LG WK L SD
Sbjct: 44 MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLL--------------------SD 83
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRR 90
S+K+PFI+EA+RLR +H E+P+YKY+PRR
Sbjct: 84 SEKRPFIDEAKRLRAVHMKEYPDYKYRPRR 113
>sp|Q6F2F0|S17B3_XENTR Transcription factor Sox-17-beta.3 OS=Xenopus tropicalis
GN=sox17b.3 PE=3 SV=2
Length = 376
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 20/97 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNAELSK LG WK+L + +
Sbjct: 62 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLAS------------------ 103
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNL 97
K+PF+EEAERLR H ++P+YKY+PRR+K K +
Sbjct: 104 --KRPFVEEAERLRVQHIQDYPDYKYRPRRKKQVKRM 138
>sp|Q8AWH2|S17B1_XENTR Transcription factor Sox-17-beta.1 OS=Xenopus tropicalis
GN=sox17b.1 PE=2 SV=1
Length = 376
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 20/97 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNAELSK LG WK+L + +
Sbjct: 62 MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLAS------------------ 103
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNL 97
K+PF+EEAERLR H ++P+YKY+PRR+K K +
Sbjct: 104 --KRPFVEEAERLRVQHIQDYPDYKYRPRRKKQVKRM 138
>sp|Q9BT81|SOX7_HUMAN Transcription factor SOX-7 OS=Homo sapiens GN=SOX7 PE=1 SV=1
Length = 388
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 20/97 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNAELSK LG WK L +
Sbjct: 49 MNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTL-------------------- 88
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNL 97
S K+P+++EAERLR H ++PNYKY+PRR+K +K L
Sbjct: 89 SQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRL 125
>sp|P48430|SOX2_CHICK Transcription factor SOX-2 OS=Gallus gallus GN=SOX2 PE=1 SV=1
Length = 315
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 20/91 (21%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVW++ RR +A + P +HN+E+SK LG WK L S+
Sbjct: 43 MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLL--------------------SE 82
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRR 91
++K+PFI+EA+RLR +H EHP+YKY+PRR+
Sbjct: 83 AEKRPFIDEAKRLRALHMKEHPDYKYRPRRK 113
>sp|P40646|SOX7_MOUSE Transcription factor SOX-7 OS=Mus musculus GN=Sox7 PE=1 SV=2
Length = 380
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 20/97 (20%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNAELSK LG WK L +
Sbjct: 49 MNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTL-------------------- 88
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRKCSKNL 97
S K+P+++EAERLR H ++PNYKY+PRR+K K L
Sbjct: 89 SQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQGKRL 125
>sp|Q6EJB7|SOX3_DANRE Transcription factor Sox-3 OS=Danio rerio GN=sox3 PE=1 SV=1
Length = 300
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 20/90 (22%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVW++ RR +A + P +HN+E+SK LG WK L +D
Sbjct: 39 MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLL--------------------TD 78
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRR 90
++K+PFI+EA+RLR +H EHP+YKY+PRR
Sbjct: 79 AEKRPFIDEAKRLRAMHMKEHPDYKYRPRR 108
>sp|P35713|SOX18_HUMAN Transcription factor SOX-18 OS=Homo sapiens GN=SOX18 PE=1 SV=2
Length = 384
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 55/92 (59%), Gaps = 20/92 (21%)
Query: 1 MNAFMVWAQAARRTLANQYPSLHNAELSKTLGVLWKTLKVETHYHHVMSPFEDTYTKLSD 60
MNAFMVWA+ R+ LA Q P LHNA LSK LG WK L
Sbjct: 89 MNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNA-------------------- 128
Query: 61 SDKKPFIEEAERLRQIHKSEHPNYKYQPRRRK 92
++K+PF+EEAERLR H +HPNYKY+PRR+K
Sbjct: 129 AEKRPFVEEAERLRVQHLRDHPNYKYRPRRKK 160
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.126 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,379,751
Number of Sequences: 539616
Number of extensions: 1575282
Number of successful extensions: 4732
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 4216
Number of HSP's gapped (non-prelim): 330
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)