Query psy3438
Match_columns 91
No_of_seqs 151 out of 1124
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 16:42:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3438.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3438hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 99.7 4E-17 1.4E-21 128.2 5.9 73 1-79 2-74 (675)
2 1yuw_A Heat shock cognate 71 k 99.6 1.3E-16 4.3E-21 122.6 6.3 73 2-80 5-77 (554)
3 3i33_A Heat shock-related 70 k 99.6 4.8E-16 1.7E-20 113.8 7.2 74 1-80 23-96 (404)
4 4b9q_A Chaperone protein DNAK; 99.6 4.2E-16 1.4E-20 120.8 6.8 73 2-80 3-76 (605)
5 2kho_A Heat shock protein 70; 99.6 9.9E-16 3.4E-20 118.7 6.9 73 2-80 3-76 (605)
6 4gni_A Putative heat shock pro 99.6 2.7E-15 9.1E-20 110.3 7.1 56 1-56 13-68 (409)
7 1dkg_D Molecular chaperone DNA 99.6 4.4E-15 1.5E-19 108.0 6.7 73 2-80 3-76 (383)
8 2v7y_A Chaperone protein DNAK; 99.6 6E-15 2.1E-19 112.0 7.5 72 2-80 3-74 (509)
9 3qfu_A 78 kDa glucose-regulate 99.5 5.1E-15 1.8E-19 107.6 6.1 73 2-80 19-91 (394)
10 1jce_A ROD shape-determining p 98.5 7.3E-08 2.5E-12 69.0 3.9 46 2-56 4-52 (344)
11 4ehu_A Activator of 2-hydroxyi 97.3 0.00019 6.3E-09 49.9 3.7 22 1-22 1-22 (276)
12 1k8k_A ARP3, actin-like protei 97.0 0.00039 1.3E-08 51.0 2.9 46 2-55 6-69 (418)
13 2fsj_A Hypothetical protein TA 96.5 0.0013 4.4E-08 47.5 2.5 17 1-17 21-37 (346)
14 2fxu_A Alpha-actin-1, actin, a 96.4 0.0005 1.7E-08 49.8 -0.2 47 1-55 5-61 (375)
15 2zgy_A Plasmid segregation pro 96.3 0.0064 2.2E-07 43.0 5.1 24 3-26 2-26 (320)
16 2ych_A Competence protein PILM 95.3 0.0041 1.4E-07 44.6 0.9 35 3-39 15-49 (377)
17 1k8k_B ARP2, actin-like protei 94.6 0.0062 2.1E-07 44.5 0.0 54 2-55 7-64 (394)
18 1hjr_A Holliday junction resol 93.4 0.14 4.6E-06 33.6 4.8 26 1-26 1-28 (158)
19 1hux_A Activator of (R)-2-hydr 93.3 0.079 2.7E-06 36.8 3.8 22 1-22 3-25 (270)
20 3qb0_A Actin-related protein 4 92.8 0.08 2.7E-06 40.4 3.4 44 2-53 24-71 (498)
21 1iv0_A Hypothetical protein; r 91.9 0.16 5.3E-06 30.7 3.2 20 1-20 1-20 (98)
22 1vhx_A Putative holliday junct 91.7 0.1 3.6E-06 33.7 2.4 20 1-20 3-22 (150)
23 3ezw_A Glycerol kinase; glycer 91.5 0.17 5.8E-06 38.3 3.8 18 3-20 6-23 (526)
24 4ep4_A Crossover junction endo 91.1 0.18 6.3E-06 33.3 3.2 19 1-19 1-19 (166)
25 3i8b_A Xylulose kinase; strain 90.6 0.21 7E-06 37.9 3.5 18 2-19 6-23 (515)
26 2w40_A Glycerol kinase, putati 90.4 0.2 6.9E-06 37.5 3.3 18 3-20 6-23 (503)
27 2dpn_A Glycerol kinase; thermu 90.2 0.2 6.9E-06 37.5 3.1 19 2-20 3-21 (495)
28 3djc_A Type III pantothenate k 90.1 0.31 1.1E-05 34.2 3.9 21 2-22 3-23 (266)
29 3ifr_A Carbohydrate kinase, FG 90.0 0.29 9.8E-06 36.9 3.8 19 2-20 8-26 (508)
30 3ll3_A Gluconate kinase; xylul 89.9 0.25 8.6E-06 37.2 3.5 19 2-20 5-23 (504)
31 3l0q_A Xylulose kinase; xlylul 89.9 0.24 8.1E-06 37.7 3.3 19 2-20 6-24 (554)
32 2uyt_A Rhamnulokinase; rhamnos 89.8 0.18 6.1E-06 37.6 2.5 18 2-19 5-22 (489)
33 2p3r_A Glycerol kinase; glycer 89.7 0.24 8.2E-06 37.4 3.2 19 2-20 4-22 (510)
34 3g25_A Glycerol kinase; IDP007 89.3 0.29 9.9E-06 36.7 3.4 19 2-20 7-25 (501)
35 4bc3_A Xylulose kinase; transf 89.2 0.3 1E-05 37.1 3.4 19 2-20 11-29 (538)
36 3jvp_A Ribulokinase; PSI-II, N 89.0 0.27 9.1E-06 37.6 3.0 19 2-20 6-24 (572)
37 3h3n_X Glycerol kinase; ATP-bi 88.9 0.31 1.1E-05 36.6 3.3 19 2-20 6-24 (506)
38 3h6e_A Carbohydrate kinase, FG 88.9 0.26 8.8E-06 37.2 2.8 19 2-20 7-25 (482)
39 2zf5_O Glycerol kinase; hypert 88.7 0.3 1E-05 36.6 3.1 19 2-20 4-22 (497)
40 3hz6_A Xylulokinase; xylulose, 88.6 0.29 9.9E-06 36.9 3.0 18 2-19 6-23 (511)
41 3vov_A Glucokinase, hexokinase 88.4 0.38 1.3E-05 33.6 3.3 21 1-21 1-21 (302)
42 2e2o_A Hexokinase; acetate and 87.8 0.39 1.3E-05 33.1 3.0 19 1-19 2-20 (299)
43 4e1j_A Glycerol kinase; struct 87.8 0.38 1.3E-05 36.4 3.1 18 2-19 27-44 (520)
44 2itm_A Xylulose kinase, xylulo 87.7 0.41 1.4E-05 35.6 3.3 17 3-19 2-18 (484)
45 2d4w_A Glycerol kinase; alpha 86.5 0.49 1.7E-05 35.5 3.1 19 2-20 3-21 (504)
46 4apw_A ALP12; actin-like prote 85.4 0.18 6.3E-06 35.9 0.3 53 2-54 8-74 (329)
47 2ews_A Pantothenate kinase; PA 85.0 0.77 2.6E-05 32.6 3.4 23 1-23 20-42 (287)
48 4htl_A Beta-glucoside kinase; 84.9 0.71 2.4E-05 32.1 3.1 19 1-19 4-22 (297)
49 1zbs_A Hypothetical protein PG 84.0 1.1 3.9E-05 30.9 3.9 20 3-22 2-21 (291)
50 2ch5_A NAGK protein; transfera 83.5 0.8 2.7E-05 32.1 2.9 21 2-22 7-28 (347)
51 2gup_A ROK family protein; sug 83.3 0.82 2.8E-05 31.4 2.9 19 1-19 4-22 (292)
52 3bex_A Type III pantothenate k 83.2 0.83 2.8E-05 31.5 2.8 22 1-22 3-24 (249)
53 2ivn_A O-sialoglycoprotein end 82.7 1.3 4.3E-05 31.6 3.7 22 1-22 1-22 (330)
54 3h1q_A Ethanolamine utilizatio 82.7 1.2 4.3E-05 29.9 3.6 19 2-20 29-47 (272)
55 1zc6_A Probable N-acetylglucos 82.6 1.1 3.6E-05 31.2 3.2 21 2-22 12-33 (305)
56 2aa4_A Mannac kinase, putative 82.4 1 3.6E-05 30.7 3.1 22 1-22 1-23 (289)
57 1nu0_A Hypothetical protein YQ 81.8 1.6 5.6E-05 27.7 3.6 18 3-20 5-22 (138)
58 1woq_A Inorganic polyphosphate 81.7 1.3 4.4E-05 30.2 3.3 19 1-19 12-30 (267)
59 2h3g_X Biosynthetic protein; p 79.8 2 6.9E-05 30.0 3.9 20 3-22 2-21 (268)
60 3epq_A Putative fructokinase; 78.2 1.7 5.9E-05 30.4 3.1 20 1-20 3-22 (302)
61 1zxo_A Conserved hypothetical 78.1 1.2 4E-05 30.8 2.2 20 3-22 2-21 (291)
62 3vgl_A Glucokinase; ROK family 77.1 1.8 6.2E-05 30.3 3.0 18 2-19 3-20 (321)
63 3js6_A Uncharacterized PARM pr 75.9 3.9 0.00013 29.3 4.6 25 1-27 4-28 (355)
64 1saz_A Probable butyrate kinas 75.3 4 0.00014 29.5 4.5 20 2-21 3-22 (381)
65 1bdg_A Hexokinase; phosphotran 74.7 2.1 7.2E-05 32.0 2.9 18 2-19 69-86 (451)
66 2f9w_A Pantothenate kinase; CO 73.4 3.4 0.00012 29.0 3.6 21 2-22 24-45 (271)
67 2yhw_A Bifunctional UDP-N-acet 72.4 2.3 7.8E-05 29.9 2.5 21 2-22 31-52 (343)
68 2q2r_A Glucokinase 1, putative 72.4 2.8 9.7E-05 29.9 3.0 20 1-20 29-48 (373)
69 4db3_A Glcnac kinase, N-acetyl 72.3 3 0.0001 29.3 3.1 19 1-19 24-42 (327)
70 2qm1_A Glucokinase; alpha-beta 72.3 2.9 0.0001 28.8 3.0 19 2-20 7-25 (326)
71 2yhx_A Hexokinase B; transfera 71.4 3 0.0001 31.4 3.1 17 3-19 63-79 (457)
72 3nuw_A 2-OXO-3-deoxygalactonat 70.5 4.4 0.00015 29.0 3.7 20 3-22 8-27 (295)
73 1sz2_A Glucokinase, glucose ki 69.0 4.2 0.00015 28.5 3.3 18 2-19 15-32 (332)
74 3o8m_A Hexokinase; rnaseh-like 68.8 3.7 0.00012 31.3 3.1 17 3-19 82-98 (485)
75 2ap1_A Putative regulator prot 63.7 5.6 0.00019 27.6 3.0 18 2-19 25-42 (327)
76 3r8e_A Hypothetical sugar kina 63.7 5.9 0.0002 27.6 3.2 19 2-20 20-38 (321)
77 3htv_A D-allose kinase, alloki 63.4 5.3 0.00018 27.8 2.9 19 2-20 8-26 (310)
78 1z6r_A MLC protein; transcript 62.7 5.2 0.00018 28.7 2.8 18 2-19 86-103 (406)
79 2hoe_A N-acetylglucosamine kin 62.0 6.1 0.00021 28.2 3.0 18 2-19 88-105 (380)
80 3mcp_A Glucokinase; structural 61.8 9 0.00031 27.7 3.9 20 2-21 10-29 (366)
81 1cza_N Hexokinase type I; stru 59.7 6.1 0.00021 32.1 2.9 18 2-19 527-544 (917)
82 1cza_N Hexokinase type I; stru 59.5 6.2 0.00021 32.1 2.9 18 2-19 79-96 (917)
83 3f9m_A Glucokinase; hexokinase 59.3 7.1 0.00024 29.6 3.1 17 3-19 79-95 (470)
84 3hm8_A Hexokinase-3; glucose, 58.2 7.2 0.00025 29.4 2.9 17 3-19 61-77 (445)
85 3cet_A Conserved archaeal prot 56.9 9.5 0.00033 27.8 3.3 21 2-22 1-22 (334)
86 1z05_A Transcriptional regulat 56.3 7.8 0.00027 28.1 2.8 18 2-19 109-126 (429)
87 1t6c_A Exopolyphosphatase; alp 53.0 16 0.00056 25.7 4.0 27 1-27 12-40 (315)
88 3r6m_A YEAZ, resuscitation pro 51.5 16 0.00056 24.5 3.6 23 1-23 2-24 (213)
89 4dkw_A Large terminase protein 50.7 10 0.00035 25.4 2.5 13 3-15 29-41 (211)
90 3t69_A Putative 2-dehydro-3-de 50.4 12 0.00042 27.1 3.0 19 2-20 8-26 (330)
91 2nrh_A Transcriptional activat 48.1 8.4 0.00029 26.1 1.7 21 1-23 1-21 (219)
92 3dwl_A Actin-related protein 3 48.0 2.5 8.5E-05 31.3 -1.0 20 2-21 6-25 (427)
93 4a2a_A Cell division protein F 47.4 15 0.0005 27.0 3.1 18 2-19 9-26 (419)
94 1nbw_A Glycerol dehydratase re 44.2 16 0.00054 28.8 2.9 24 2-25 3-28 (607)
95 3lm2_A Putative kinase; struct 42.5 18 0.0006 24.4 2.7 14 2-15 7-20 (226)
96 3eno_A Putative O-sialoglycopr 40.4 22 0.00076 25.2 3.1 22 1-22 6-27 (334)
97 3zyy_X Iron-sulfur cluster bin 40.1 19 0.00066 28.3 2.9 17 3-19 208-224 (631)
98 1kcf_A Hypothetical 30.2 KD pr 39.9 22 0.00074 24.8 2.8 18 2-19 41-58 (258)
99 2wbn_A G2P, terminase large su 36.7 18 0.0006 24.0 1.9 9 3-11 52-60 (212)
100 2d0o_A DIOL dehydratase-reacti 34.4 39 0.0013 26.6 3.7 27 1-27 2-31 (610)
101 3dml_A Putative uncharacterize 31.0 32 0.0011 20.8 2.3 23 31-53 73-98 (116)
102 4ich_A Transcriptional regulat 30.6 11 0.00036 25.7 0.0 13 3-15 8-20 (311)
103 4hl9_A Antibiotic biosynthesis 26.7 14 0.00046 22.4 0.0 10 4-13 9-18 (118)
104 3mdq_A Exopolyphosphatase; str 26.1 1E+02 0.0035 21.5 4.5 27 2-28 5-33 (315)
105 2qgv_A Hydrogenase-1 operon pr 26.1 37 0.0013 21.3 2.0 23 31-53 88-113 (140)
106 2qsi_A Putative hydrogenase ex 26.0 37 0.0013 21.2 2.0 23 31-53 86-111 (137)
107 2i7n_A Pantothenate kinase 1; 25.9 51 0.0018 24.0 3.0 20 1-20 3-22 (360)
108 3en9_A Glycoprotease, O-sialog 24.3 68 0.0023 23.9 3.5 21 1-21 6-26 (540)
109 3f0w_A NUMB-R, NUMB-like prote 24.2 19 0.00064 23.1 0.3 8 5-12 10-17 (168)
110 3aap_A Ectonucleoside triphosp 23.6 61 0.0021 23.2 3.0 18 2-19 4-21 (353)
111 4fo0_A Actin-related protein 8 22.1 57 0.002 24.4 2.7 25 3-27 17-41 (593)
112 4h1z_A Enolase Q92ZS5; dehydra 21.4 20 0.00068 26.2 0.0 10 4-13 9-18 (412)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.67 E-value=4e-17 Score=128.19 Aligned_cols=73 Identities=25% Similarity=0.259 Sum_probs=61.0
Q ss_pred CCeEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEEEEcCCeeeeccchhhccccceecccCCCCccccccccCCC
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGLRKFWFAYFTTYQVDLTGEPDQVCLSGLPD 79 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~~~~~~~~gr~~~s~k~~lg~ 79 (91)
|.+||||||||||+||++.+++++++.|+.|++.+||+|+|.+++++||.+|++++.. ...+.+.++||+||.
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~------~p~~ti~~~KrllG~ 74 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTS------NIKNTVANLKRIIGL 74 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTT------CGGGEECCHHHHTTC
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhh------ChHhHHHHHHHHhCC
Confidence 6789999999999999999999999999999999999999998889999999876521 122345566777765
No 2
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.65 E-value=1.3e-16 Score=122.60 Aligned_cols=73 Identities=62% Similarity=0.791 Sum_probs=60.4
Q ss_pred CeEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEEEEcCCeeeeccchhhccccceecccCCCCccccccccCCCC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGLRKFWFAYFTTYQVDLTGEPDQVCLSGLPDS 80 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~~~~~~~~gr~~~s~k~~lg~~ 80 (91)
.+||||||||||+||++.+|++++++|+.|++.+||+|+|.+++++||++|++++.. ...+.+.++||+||..
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~------~p~~ti~~~KrllG~~ 77 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM------NPTNTVFDAKRLIGRR 77 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTT------CGGGEECCGGGTTTCC
T ss_pred CEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhh------ChhhehHhhHHhcCCC
Confidence 489999999999999999999999999999999999999998889999999976421 1223445677777763
No 3
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.63 E-value=4.8e-16 Score=113.79 Aligned_cols=74 Identities=64% Similarity=0.801 Sum_probs=62.0
Q ss_pred CCeEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEEEEcCCeeeeccchhhccccceecccCCCCccccccccCCCC
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGLRKFWFAYFTTYQVDLTGEPDQVCLSGLPDS 80 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~~~~~~~~gr~~~s~k~~lg~~ 80 (91)
|.+||||||||||+||++.++.++++++..|++.+||+|+|.++++++|.+|+.+... ...+.+..+|++||.+
T Consensus 23 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~------~~~~~~~~~Kr~lg~~ 96 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM------NPTNTIFDAKRLIGRK 96 (404)
T ss_dssp CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTT------CSTTEECCGGGTTTCC
T ss_pred CCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHh------ChhhhHHHHHHHhCCC
Confidence 6789999999999999999999999999999999999999998899999999875421 2234555677777764
No 4
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.62 E-value=4.2e-16 Score=120.82 Aligned_cols=73 Identities=34% Similarity=0.421 Sum_probs=60.4
Q ss_pred CeEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEEEEc-CCeeeeccchhhccccceecccCCCCccccccccCCCC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGLRKFWFAYFTTYQVDLTGEPDQVCLSGLPDS 80 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V~~~-~~~~~vG~~A~~~~~~~~~~~~~~gr~~~s~k~~lg~~ 80 (91)
.+||||||||||+||+++++++++++|..|.+.+||+|+|. ++++++|++|+.++.. ...+.+.++||+||.+
T Consensus 3 ~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~------~p~~ti~~~KrllG~~ 76 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVT------NPQNTLFAIKRLIGRR 76 (605)
T ss_dssp CEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTT------CGGGEECCGGGTTTCB
T ss_pred cEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHh------CCCcEehhhHHhhCCC
Confidence 48999999999999999999999999999999999999997 5689999999976521 1223455677777764
No 5
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.60 E-value=9.9e-16 Score=118.75 Aligned_cols=73 Identities=36% Similarity=0.451 Sum_probs=59.5
Q ss_pred CeEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEEEEc-CCeeeeccchhhccccceecccCCCCccccccccCCCC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGLRKFWFAYFTTYQVDLTGEPDQVCLSGLPDS 80 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V~~~-~~~~~vG~~A~~~~~~~~~~~~~~gr~~~s~k~~lg~~ 80 (91)
.++|||||||||+||++.+|++++++|..|.+.+||+|+|. +++++||++|+++... ...+.+.++||+||..
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~------~p~~t~~~~Kr~iG~~ 76 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVT------NPQNTLFAIKRLIGRR 76 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTT------CGGGEEECGGGTTTCB
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhh------CCCCEeehhhHhhCCC
Confidence 47999999999999999999999999999999999999995 6789999999975421 1223455677888763
No 6
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.58 E-value=2.7e-15 Score=110.27 Aligned_cols=56 Identities=30% Similarity=0.522 Sum_probs=52.1
Q ss_pred CCeEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEEEEcCCeeeeccchhhcc
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGLRKFWFA 56 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V~~~~~~~~vG~~A~~~~ 56 (91)
|.++|||||||||+||++.+++++++.+..|.+.+||+|+|.++++++|.+|+.+.
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~ 68 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFL 68 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHH
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhh
Confidence 46899999999999999989999999999999999999999988999999998765
No 7
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.56 E-value=4.4e-15 Score=108.03 Aligned_cols=73 Identities=36% Similarity=0.451 Sum_probs=59.0
Q ss_pred CeEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEEEEc-CCeeeeccchhhccccceecccCCCCccccccccCCCC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT-DTERLIGLRKFWFAYFTTYQVDLTGEPDQVCLSGLPDS 80 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V~~~-~~~~~vG~~A~~~~~~~~~~~~~~gr~~~s~k~~lg~~ 80 (91)
.++|||||||||+||++++++++++.++.|.+.+||+|+|. ++++++|++|+++... ...+.+.++|++||..
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~------~~~~~~~~~k~~lg~~ 76 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVT------NPQNTLFAIKRLIGRR 76 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTT------CGGGEEECGGGTTTCB
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhh------CccceeehhHHhhCCC
Confidence 47899999999999999999999999999999999999996 5789999999865411 1223455677877753
No 8
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.56 E-value=6e-15 Score=112.03 Aligned_cols=72 Identities=44% Similarity=0.577 Sum_probs=60.9
Q ss_pred CeEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEEEEcCCeeeeccchhhccccceecccCCCCccccccccCCCC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGLRKFWFAYFTTYQVDLTGEPDQVCLSGLPDS 80 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~~~~~~~~gr~~~s~k~~lg~~ 80 (91)
.++|||||||||+||++.++.+++++|+.|.+.+||+|+|.+++++||++|+.+.. . .. +.+.++|++||.+
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~-----~-~p-~~~~~~Kr~lg~p 74 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAI-----T-NP-NTIISIKRHMGTD 74 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTT-----T-CS-SEEECGGGTTTSC
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHH-----h-CC-CcHHHHHHhcCCC
Confidence 48999999999999999999999999999999999999998788999999996531 1 12 4566788888863
No 9
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.55 E-value=5.1e-15 Score=107.58 Aligned_cols=73 Identities=52% Similarity=0.627 Sum_probs=60.4
Q ss_pred CeEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEEEEcCCeeeeccchhhccccceecccCCCCccccccccCCCC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDTERLIGLRKFWFAYFTTYQVDLTGEPDQVCLSGLPDS 80 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~~~~~~~~gr~~~s~k~~lg~~ 80 (91)
.++|||||||||+||++.+++++++.+..|++.+||+|+|.++++++|++|+.+... ...+.+..+|++||.+
T Consensus 19 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~------~~~~~~~~~k~~lg~~ 91 (394)
T 3qfu_A 19 TVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAA------NPQNTIFDIKRLIGLK 91 (394)
T ss_dssp SCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGG------CGGGEECCGGGTTTCC
T ss_pred CEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHh------CcccCHHHHHHHhCCC
Confidence 369999999999999999999999999999999999999998899999999975421 1234555677777763
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=98.50 E-value=7.3e-08 Score=69.00 Aligned_cols=46 Identities=35% Similarity=0.483 Sum_probs=34.8
Q ss_pred CeEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEEEEcCC--e-eeeccchhhcc
Q psy3438 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTDT--E-RLIGLRKFWFA 56 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V~~~~~--~-~~vG~~A~~~~ 56 (91)
..+|||||||||++++..++ .++ .+||+|+|.++ + .+||++|+++.
T Consensus 4 ~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~ 52 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMI 52 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTT
T ss_pred ceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhc
Confidence 57999999999999875332 232 27999999743 4 58999998754
No 11
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.30 E-value=0.00019 Score=49.85 Aligned_cols=22 Identities=32% Similarity=0.620 Sum_probs=19.6
Q ss_pred CCeEEEecccceEEEEEEeCCe
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQGK 22 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~~ 22 (91)
|.++|||+|||+|.++++++++
T Consensus 1 M~~lGID~GsT~tk~av~d~~~ 22 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILKNGE 22 (276)
T ss_dssp CEEEEEEECSSCEEEEEEETTT
T ss_pred CeEEEEEcCccEEEEEEEECCC
Confidence 8899999999999999987654
No 12
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=96.99 E-value=0.00039 Score=50.95 Aligned_cols=46 Identities=24% Similarity=0.287 Sum_probs=32.0
Q ss_pred CeEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEEEEcC------------------Ceeeeccchhhc
Q psy3438 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTD------------------TERLIGLRKFWF 55 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V~~~~------------------~~~~vG~~A~~~ 55 (91)
..|+||+||+|+.++...+..|. ..+||+|.... ...+||++|...
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~--------~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~ 69 (418)
T 1k8k_A 6 PACVVDCGTGYTKLGYAGNTEPQ--------FIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK 69 (418)
T ss_dssp CCEEEEECSSEEEEEETTCSSCS--------EEEESCEEECC-----------CCCTTGGGCEEEGGGGTSC
T ss_pred CeEEEECCCCeEEEeeCCCCCCC--------CcCCceEEEECcccccccccccccccccccCeEEChHHHhc
Confidence 56999999999999875433332 24577666542 238899999864
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=96.48 E-value=0.0013 Score=47.50 Aligned_cols=17 Identities=29% Similarity=0.401 Sum_probs=15.2
Q ss_pred CCeEEEecccceEEEEE
Q psy3438 1 MPAIGIDLGTTYSCVAV 17 (91)
Q Consensus 1 m~~iGIDfGTtns~va~ 17 (91)
|..+|||+||+|..++.
T Consensus 21 m~~igiDlG~~~tkv~~ 37 (346)
T 2fsj_A 21 MVVVGLDVGYGDTKVIG 37 (346)
T ss_dssp CEEEEEEECSSEEEEEC
T ss_pred eEEEEEecCCcceeEEe
Confidence 67899999999999884
No 14
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=96.37 E-value=0.0005 Score=49.85 Aligned_cols=47 Identities=15% Similarity=0.065 Sum_probs=31.2
Q ss_pred CCeEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEEEEc----------CCeeeeccchhhc
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFT----------DTERLIGLRKFWF 55 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V~~~----------~~~~~vG~~A~~~ 55 (91)
+..|+||+||+|+.+++..++.|. ..+||+|... ++..+||++|...
T Consensus 5 ~~~ivID~Gs~~~k~G~~~~~~p~--------~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~ 61 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFAGDDAPR--------AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 (375)
T ss_dssp CCCEEEEECSSEEEEEETTCSSCS--------EEEECCEEEECTTTC-------CCEEHHHHHHH
T ss_pred CceEEEECCCCeEEEEECCCCCCc--------eeeccccccccccccccCCCCCCeEechhHhhc
Confidence 357999999999999875443332 2345555543 2357899999764
No 15
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=96.28 E-value=0.0064 Score=43.01 Aligned_cols=24 Identities=21% Similarity=0.147 Sum_probs=18.1
Q ss_pred eEEEecccceEEEEEE-eCCeEEEE
Q psy3438 3 AIGIDLGTTYSCVAVF-QQGKVEII 26 (91)
Q Consensus 3 ~iGIDfGTtns~va~~-~~~~~~il 26 (91)
.+||||||+|+.+++. .+|....+
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~~~ 26 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIKQH 26 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEEEE
T ss_pred eEEEecCCccceEEEecCCCEEEEE
Confidence 7999999999999874 34554333
No 16
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=95.35 E-value=0.0041 Score=44.56 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=24.4
Q ss_pred eEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEE
Q psy3438 3 AIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYV 39 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V 39 (91)
++|||+||+++++++.+++++.+. ..+...+||.+
T Consensus 15 ~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~ 49 (377)
T 2ych_A 15 ALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGL 49 (377)
T ss_dssp CEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTS
T ss_pred eEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCc
Confidence 689999999999998876654442 23444556543
No 17
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=94.56 E-value=0.0062 Score=44.50 Aligned_cols=54 Identities=13% Similarity=0.019 Sum_probs=0.0
Q ss_pred CeEEEecccceEEEEEEeCCeEEE-EecCCCCeeeeEEE---EEcCCeeeeccchhhc
Q psy3438 2 PAIGIDLGTTYSCVAVFQQGKVEI-IANDQGNRTTPSYV---AFTDTERLIGLRKFWF 55 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~~~~i-l~~~~g~~~~PS~V---~~~~~~~~vG~~A~~~ 55 (91)
..|+||+||.++.++...+..|.+ +++--+....++.. .+.....+||++|...
T Consensus 7 ~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~ 64 (394)
T 1k8k_B 7 KVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASEL 64 (394)
T ss_dssp ----------------------------------------------------------
T ss_pred CEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhc
Confidence 578999999999998764444432 33222222222211 1112356799988754
No 18
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=93.44 E-value=0.14 Score=33.56 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=20.5
Q ss_pred CCeEEEecccceEEEEEEe--CCeEEEE
Q psy3438 1 MPAIGIDLGTTYSCVAVFQ--QGKVEII 26 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~--~~~~~il 26 (91)
|.++|||.|++++-+++.+ +++...+
T Consensus 1 m~ILGIDPGl~~tG~gvi~~~g~~~~~v 28 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIRQVGRQLSYL 28 (158)
T ss_dssp CEEEEEECCSSEEEEEEEEEETTEEEEE
T ss_pred CEEEEEccCCCCeeEEEEEecCCeEEEE
Confidence 7899999999999999874 4444444
No 19
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=93.34 E-value=0.079 Score=36.85 Aligned_cols=22 Identities=27% Similarity=0.523 Sum_probs=18.6
Q ss_pred CCeEEEecccceEEEEEEeC-Ce
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQ-GK 22 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~-~~ 22 (91)
|.++|||+|+|++.+++++. ++
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~~g~ 25 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKDGKE 25 (270)
T ss_dssp CEEEEEEECSSEEEEEEEETTTE
T ss_pred cEEEEEEeccceEEEEEEeCCCC
Confidence 46899999999999999874 44
No 20
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=92.83 E-value=0.08 Score=40.42 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=31.1
Q ss_pred CeEEEecccceEEEEEEeCCeEEEEecCCCCeeeeEEEEEcC----Ceeeeccchh
Q psy3438 2 PAIGIDLGTTYSCVAVFQQGKVEIIANDQGNRTTPSYVAFTD----TERLIGLRKF 53 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~~~~il~~~~g~~~~PS~V~~~~----~~~~vG~~A~ 53 (91)
..|+||+||.++.+.+..++.| ...+||+|.... +..+||.+|.
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P--------~~v~PSvVg~~~~~~~~~~~vG~e~~ 71 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFP--------QSILPSVYGKYTADEGNKKIFSEQSI 71 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSC--------SEEEESEEEEESSCSSCCEECCTTGG
T ss_pred CeEEEECCCcEEEEEECCCCCe--------eeecCceeEEeccCCCccEEEecHHH
Confidence 4689999999999886433322 234699998852 2578998743
No 21
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=91.85 E-value=0.16 Score=30.71 Aligned_cols=20 Identities=25% Similarity=0.270 Sum_probs=18.1
Q ss_pred CCeEEEecccceEEEEEEeC
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~ 20 (91)
|.++|||+|+..+-||+.+.
T Consensus 1 mriLglD~G~kriGvAvsd~ 20 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEE 20 (98)
T ss_dssp CCEEEEEESSSEEEEEEECS
T ss_pred CcEEEEEeCCCEEEEEEEeC
Confidence 78999999999999999764
No 22
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=91.69 E-value=0.1 Score=33.71 Aligned_cols=20 Identities=35% Similarity=0.544 Sum_probs=17.9
Q ss_pred CCeEEEecccceEEEEEEeC
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~ 20 (91)
|.++|||+|+..+-+|+.+.
T Consensus 3 mriLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEEECSSEEEEEEECT
T ss_pred CEEEEEEccCCEEEEEEEEC
Confidence 66899999999999999874
No 23
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=91.50 E-value=0.17 Score=38.28 Aligned_cols=18 Identities=33% Similarity=0.477 Sum_probs=16.1
Q ss_pred eEEEecccceEEEEEEeC
Q psy3438 3 AIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~~ 20 (91)
++|||+|||++.+.+++.
T Consensus 6 vlgID~GTss~Ka~l~d~ 23 (526)
T 3ezw_A 6 IVALDQGTTSSRAVVMDH 23 (526)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEccccceeeeEEcC
Confidence 689999999999999863
No 24
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=91.11 E-value=0.18 Score=33.27 Aligned_cols=19 Identities=37% Similarity=0.398 Sum_probs=17.4
Q ss_pred CCeEEEecccceEEEEEEe
Q psy3438 1 MPAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~ 19 (91)
|.++|||.|++++-+++.+
T Consensus 1 MrILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEE
Confidence 7899999999999999874
No 25
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=90.65 E-value=0.21 Score=37.88 Aligned_cols=18 Identities=28% Similarity=0.248 Sum_probs=16.5
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||+|||+..+++++
T Consensus 6 ~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEeccccEEEEEEE
Confidence 478999999999999987
No 26
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=90.42 E-value=0.2 Score=37.55 Aligned_cols=18 Identities=22% Similarity=0.337 Sum_probs=16.3
Q ss_pred eEEEecccceEEEEEEeC
Q psy3438 3 AIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~~ 20 (91)
++|||+|||+..+++++.
T Consensus 6 ~lgIDiGtT~~k~~l~d~ 23 (503)
T 2w40_A 6 ILSIDQSTQSTKVFFYDE 23 (503)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEeCCcceEEEEECC
Confidence 689999999999999863
No 27
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=90.19 E-value=0.2 Score=37.48 Aligned_cols=19 Identities=32% Similarity=0.359 Sum_probs=16.7
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|||+..+++++.
T Consensus 3 ~~lgiDiGtT~~k~~l~d~ 21 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTL 21 (495)
T ss_dssp CEEEEEECSSEEEEEEECT
T ss_pred EEEEEeeCCcceEEEEECC
Confidence 3789999999999999863
No 28
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=90.10 E-value=0.31 Score=34.21 Aligned_cols=21 Identities=24% Similarity=0.336 Sum_probs=19.0
Q ss_pred CeEEEecccceEEEEEEeCCe
Q psy3438 2 PAIGIDLGTTYSCVAVFQQGK 22 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~~ 22 (91)
+.++||.|.||..++++++++
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 589999999999999998774
No 29
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=89.97 E-value=0.29 Score=36.90 Aligned_cols=19 Identities=32% Similarity=0.562 Sum_probs=16.6
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|||+..+++++.
T Consensus 8 ~~lgIDiGtts~k~~l~d~ 26 (508)
T 3ifr_A 8 QVIGLDIGTTSTIAILVRL 26 (508)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEEecCcceEEEEECC
Confidence 3689999999999999873
No 30
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=89.93 E-value=0.25 Score=37.17 Aligned_cols=19 Identities=32% Similarity=0.466 Sum_probs=16.6
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|||+..+++++.
T Consensus 5 ~~lgIDiGtts~K~~l~d~ 23 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDI 23 (504)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEEecCCceEEEEEcC
Confidence 3789999999999999863
No 31
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=89.92 E-value=0.24 Score=37.71 Aligned_cols=19 Identities=37% Similarity=0.529 Sum_probs=16.7
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|||++.+++++.
T Consensus 6 ~~lgIDiGtts~ka~l~d~ 24 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDL 24 (554)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEEECcccEEEEEECC
Confidence 4789999999999999863
No 32
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=89.80 E-value=0.18 Score=37.57 Aligned_cols=18 Identities=22% Similarity=0.440 Sum_probs=16.0
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||+|||+..+++++
T Consensus 5 ~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEE
Confidence 368999999999999875
No 33
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=89.72 E-value=0.24 Score=37.35 Aligned_cols=19 Identities=32% Similarity=0.398 Sum_probs=16.7
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|||+..+++++.
T Consensus 4 ~~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEcCCcceEEEEECC
Confidence 4789999999999999863
No 34
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=89.34 E-value=0.29 Score=36.71 Aligned_cols=19 Identities=42% Similarity=0.485 Sum_probs=16.7
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|||+..+++++.
T Consensus 7 ~~lgIDiGtts~k~~l~d~ 25 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQ 25 (501)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEeCccceEEEEEcC
Confidence 3789999999999999863
No 35
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=89.25 E-value=0.3 Score=37.06 Aligned_cols=19 Identities=21% Similarity=0.239 Sum_probs=16.6
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|||++.+.+++.
T Consensus 11 ~~lgID~GTts~Ka~l~d~ 29 (538)
T 4bc3_A 11 CCLGWDFSTQQVKVVAVDA 29 (538)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEEEcCcCEEEEEECC
Confidence 3689999999999999873
No 36
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=89.03 E-value=0.27 Score=37.61 Aligned_cols=19 Identities=26% Similarity=0.413 Sum_probs=16.8
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|||+..+++++.
T Consensus 6 ~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEecCCcceEEEEEEC
Confidence 4789999999999999863
No 37
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=88.91 E-value=0.31 Score=36.61 Aligned_cols=19 Identities=37% Similarity=0.503 Sum_probs=16.7
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|||+..+++++.
T Consensus 6 ~~lgIDiGtts~k~~l~d~ 24 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDR 24 (506)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEEcCCCceEEEEECC
Confidence 3789999999999999863
No 38
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=88.88 E-value=0.26 Score=37.16 Aligned_cols=19 Identities=42% Similarity=0.564 Sum_probs=16.3
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|||+..+++++.
T Consensus 7 ~~lgIDiGTts~Ka~l~d~ 25 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDL 25 (482)
T ss_dssp -CEEEEECSSEEEEEEECT
T ss_pred eEEEEEcCCCCeEEEEEEC
Confidence 4789999999999999863
No 39
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=88.72 E-value=0.3 Score=36.56 Aligned_cols=19 Identities=26% Similarity=0.433 Sum_probs=16.7
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|||+..+++++.
T Consensus 4 ~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEecCCchhEEEEECC
Confidence 3789999999999999864
No 40
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=88.62 E-value=0.29 Score=36.89 Aligned_cols=18 Identities=28% Similarity=0.200 Sum_probs=16.3
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||+|||+..+++++
T Consensus 6 ~~lgIDiGtts~k~~l~d 23 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALAD 23 (511)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEEeCCCceEEEEEC
Confidence 478999999999999986
No 41
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=88.40 E-value=0.38 Score=33.61 Aligned_cols=21 Identities=38% Similarity=0.626 Sum_probs=18.7
Q ss_pred CCeEEEecccceEEEEEEeCC
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQG 21 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~ 21 (91)
|.++|||+|.|+..+++++..
T Consensus 1 M~~lgiDiGgt~i~~~l~d~~ 21 (302)
T 3vov_A 1 MKVVGLDLGGTKIAAGVFDGK 21 (302)
T ss_dssp CCEEEEEECSSEEEEEEECSS
T ss_pred CEEEEEEEcCCEEEEEEEeCC
Confidence 889999999999999998643
No 42
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=87.78 E-value=0.39 Score=33.13 Aligned_cols=19 Identities=26% Similarity=0.494 Sum_probs=17.0
Q ss_pred CCeEEEecccceEEEEEEe
Q psy3438 1 MPAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~ 19 (91)
|.++|||+|.|++.+++++
T Consensus 2 M~~lgiDiGgt~~~~~l~d 20 (299)
T 2e2o_A 2 MIIVGVDAGGTKTKAVAYD 20 (299)
T ss_dssp CCEEEEEECSSCEEEEEEC
T ss_pred eEEEEEEeCCCcEEEEEEc
Confidence 4689999999999999986
No 43
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=87.77 E-value=0.38 Score=36.40 Aligned_cols=18 Identities=39% Similarity=0.484 Sum_probs=16.3
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||+|||+..+++++
T Consensus 27 ~~lgIDiGtts~k~~l~d 44 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFD 44 (520)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred eEEEEEeCCcceEEEEEC
Confidence 379999999999999986
No 44
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=87.71 E-value=0.41 Score=35.65 Aligned_cols=17 Identities=47% Similarity=0.608 Sum_probs=15.8
Q ss_pred eEEEecccceEEEEEEe
Q psy3438 3 AIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~ 19 (91)
++|||+|||+..+++++
T Consensus 2 ~lgiDiGtt~~k~~l~d 18 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLN 18 (484)
T ss_dssp EEEEEECSSEEEEEEEC
T ss_pred EEEEEecCcccEEEEEC
Confidence 68999999999999986
No 45
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=86.50 E-value=0.49 Score=35.49 Aligned_cols=19 Identities=42% Similarity=0.508 Sum_probs=16.6
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|||+..+++++.
T Consensus 3 ~~lgiDiGtts~k~~l~d~ 21 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDH 21 (504)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEecCCcceEEEEECC
Confidence 3689999999999999863
No 46
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=85.42 E-value=0.18 Score=35.88 Aligned_cols=53 Identities=19% Similarity=0.161 Sum_probs=30.2
Q ss_pred CeEEEecccceEEEEEE-eCC-----eEEEEecCCCC--------eeeeEEEEEcCCeeeeccchhh
Q psy3438 2 PAIGIDLGTTYSCVAVF-QQG-----KVEIIANDQGN--------RTTPSYVAFTDTERLIGLRKFW 54 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~-~~~-----~~~il~~~~g~--------~~~PS~V~~~~~~~~vG~~A~~ 54 (91)
.+||||+|..|..++.. .+| +...++..-+. ....-.|.|++...+||+.|..
T Consensus 8 ~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~ 74 (329)
T 4apw_A 8 YVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVE 74 (329)
T ss_dssp EEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSS
T ss_pred eEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCccccc
Confidence 47899999999998753 121 11122221000 0012245666678999998864
No 47
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=85.01 E-value=0.77 Score=32.60 Aligned_cols=23 Identities=26% Similarity=0.260 Sum_probs=18.8
Q ss_pred CCeEEEecccceEEEEEEeCCeE
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQGKV 23 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~~~ 23 (91)
+..+|||.|.|.+.++++++++.
T Consensus 20 ~~~iGIDiGsTt~K~V~~~~~~i 42 (287)
T 2ews_A 20 HMKVGIDAGGTLIKIVQEQDNQR 42 (287)
T ss_dssp -CEEEEEECSSEEEEEEECSSCE
T ss_pred CeEEEEEEChhhEEEEEEcCCEE
Confidence 35799999999999999876654
No 48
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=84.91 E-value=0.71 Score=32.10 Aligned_cols=19 Identities=26% Similarity=0.282 Sum_probs=17.6
Q ss_pred CCeEEEecccceEEEEEEe
Q psy3438 1 MPAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~ 19 (91)
|.++|||+|.|+..+++++
T Consensus 4 m~~lgiDiGgt~i~~~l~d 22 (297)
T 4htl_A 4 MKIAAFDIGGTALKMGVVL 22 (297)
T ss_dssp CCEEEEEECSSEEEEEEEC
T ss_pred cEEEEEEeCCCeEEEEEEC
Confidence 7789999999999999986
No 49
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=83.99 E-value=1.1 Score=30.88 Aligned_cols=20 Identities=25% Similarity=0.237 Sum_probs=17.3
Q ss_pred eEEEecccceEEEEEEeCCe
Q psy3438 3 AIGIDLGTTYSCVAVFQQGK 22 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~~~~ 22 (91)
++|||.|.|++.++++++++
T Consensus 2 ~lgiDiGGT~~~~~l~d~g~ 21 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAKEGK 21 (291)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEeCccceEEEEEeCCe
Confidence 68999999999999987443
No 50
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=83.50 E-value=0.8 Score=32.10 Aligned_cols=21 Identities=33% Similarity=0.305 Sum_probs=17.7
Q ss_pred CeEEEecccceEEEEEEe-CCe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ-QGK 22 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~-~~~ 22 (91)
.++|||+|.|++.+++++ +|+
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~ 28 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK 28 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC
T ss_pred EEEEEEcCccceEEEEEeCCCC
Confidence 479999999999999986 443
No 51
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=83.32 E-value=0.82 Score=31.36 Aligned_cols=19 Identities=32% Similarity=0.284 Sum_probs=17.4
Q ss_pred CCeEEEecccceEEEEEEe
Q psy3438 1 MPAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~ 19 (91)
|.++|||+|.|+..+++++
T Consensus 4 m~~lgidiggt~i~~~l~d 22 (292)
T 2gup_A 4 MTIATIDIGGTGIKFASLT 22 (292)
T ss_dssp CCEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEECCCEEEEEEEC
Confidence 6789999999999999986
No 52
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=83.19 E-value=0.83 Score=31.53 Aligned_cols=22 Identities=27% Similarity=0.381 Sum_probs=18.8
Q ss_pred CCeEEEecccceEEEEEEeCCe
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQGK 22 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~~ 22 (91)
|+.+.||.|+||..++++++++
T Consensus 3 ~M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 3 PMYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp CEEEEEEECSSEEEEEEESSSS
T ss_pred ceEEEEEECCCeEEEEEEECCE
Confidence 3578999999999999997654
No 53
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=82.72 E-value=1.3 Score=31.59 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=20.0
Q ss_pred CCeEEEecccceEEEEEEeCCe
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQGK 22 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~~ 22 (91)
|.++|||-++..+.+|++++++
T Consensus 1 M~iLgIdts~~~~~val~~~g~ 22 (330)
T 2ivn_A 1 MLALGIEGTAHTLGIGIVSEDK 22 (330)
T ss_dssp CCEEEEECSSSEEEEEEECSSC
T ss_pred CEEEEEEccCCCeEEEEEECCE
Confidence 8899999999999999998774
No 54
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=82.68 E-value=1.2 Score=29.95 Aligned_cols=19 Identities=37% Similarity=0.524 Sum_probs=15.8
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+||+++.+.+.+.
T Consensus 29 ~~~gIDiGS~s~k~vi~~~ 47 (272)
T 3h1q_A 29 YKVGVDLGTADIVLVVTDQ 47 (272)
T ss_dssp CEEEEECCSSEEEEEEECT
T ss_pred EEEEEEcccceEEEEEECC
Confidence 4789999999999888643
No 55
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=82.57 E-value=1.1 Score=31.16 Aligned_cols=21 Identities=29% Similarity=0.392 Sum_probs=17.6
Q ss_pred CeEEEecccceEEEEEEe-CCe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ-QGK 22 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~-~~~ 22 (91)
.++|||+|.|++.+++++ +++
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~ 33 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT 33 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC
T ss_pred EEEEEEcCccceEEEEEcCCCC
Confidence 378999999999999986 443
No 56
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=82.44 E-value=1 Score=30.72 Aligned_cols=22 Identities=32% Similarity=0.567 Sum_probs=18.8
Q ss_pred CCeEEEecccceEEEEEEe-CCe
Q psy3438 1 MPAIGIDLGTTYSCVAVFQ-QGK 22 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~-~~~ 22 (91)
|.++|||+|.|+..+++++ +|+
T Consensus 1 m~~lgidiggt~~~~~l~d~~g~ 23 (289)
T 2aa4_A 1 MTTLAIDIGGTKLAAALIGADGQ 23 (289)
T ss_dssp CCEEEEEECSSEEEEEEECTTCC
T ss_pred CeEEEEEeCCCEEEEEEECCCCC
Confidence 7789999999999999986 443
No 57
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=81.78 E-value=1.6 Score=27.68 Aligned_cols=18 Identities=39% Similarity=0.394 Sum_probs=16.6
Q ss_pred eEEEecccceEEEEEEeC
Q psy3438 3 AIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~~ 20 (91)
++|||+|+..+-||+.+.
T Consensus 5 iLglD~G~kriGvAvsd~ 22 (138)
T 1nu0_A 5 LMAFDFGTKSIGVAVGQR 22 (138)
T ss_dssp EEEEECCSSEEEEEEEET
T ss_pred EEEEEeCCCEEEEEEEcC
Confidence 799999999999999875
No 58
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=81.72 E-value=1.3 Score=30.19 Aligned_cols=19 Identities=37% Similarity=0.501 Sum_probs=17.4
Q ss_pred CCeEEEecccceEEEEEEe
Q psy3438 1 MPAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~ 19 (91)
|.++|||+|.|+..+++++
T Consensus 12 ~~~lgidiggt~i~~~l~d 30 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVD 30 (267)
T ss_dssp CCEEEEEECSSEEEEEEEE
T ss_pred CEEEEEEECCCEEEEEEEE
Confidence 6789999999999999987
No 59
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=79.76 E-value=2 Score=29.98 Aligned_cols=20 Identities=30% Similarity=0.657 Sum_probs=18.0
Q ss_pred eEEEecccceEEEEEEeCCe
Q psy3438 3 AIGIDLGTTYSCVAVFQQGK 22 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~~~~ 22 (91)
.+.||.|+||..++++++++
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 58899999999999998775
No 60
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=78.16 E-value=1.7 Score=30.39 Aligned_cols=20 Identities=30% Similarity=0.208 Sum_probs=17.7
Q ss_pred CCeEEEecccceEEEEEEeC
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~ 20 (91)
|.++|||+|.|+..+++++.
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~ 22 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE 22 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEECcceeEEEEEEC
Confidence 57899999999999999863
No 61
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=78.10 E-value=1.2 Score=30.80 Aligned_cols=20 Identities=25% Similarity=0.215 Sum_probs=15.5
Q ss_pred eEEEecccceEEEEEEeCCe
Q psy3438 3 AIGIDLGTTYSCVAVFQQGK 22 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~~~~ 22 (91)
++|||+|.|++.++++++++
T Consensus 2 ~lgiDiGGT~i~~~l~d~g~ 21 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVLNGA 21 (291)
T ss_dssp --CEECCTTCEEEEEECSSS
T ss_pred EEEEEeccccEEEEEEcCCe
Confidence 68999999999999987443
No 62
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=77.09 E-value=1.8 Score=30.28 Aligned_cols=18 Identities=33% Similarity=0.540 Sum_probs=16.2
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||+|.|+..+++++
T Consensus 3 ~~lgiDiGgt~i~~~l~d 20 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVD 20 (321)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEEECCCEEEEEEEC
Confidence 378999999999999986
No 63
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=75.88 E-value=3.9 Score=29.34 Aligned_cols=25 Identities=12% Similarity=0.185 Sum_probs=17.4
Q ss_pred CCeEEEecccceEEEEEEeCCeEEEEe
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQGKVEIIA 27 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~~~~il~ 27 (91)
|.++|||+|..+..+ ..+++..++|
T Consensus 4 ~~iigiD~G~~~~K~--~~~~~~~~fP 28 (355)
T 3js6_A 4 VYVMALDFGNGFVKG--KINDEKFVIP 28 (355)
T ss_dssp EEEEEEEECSSEEEE--EETTEEEEEE
T ss_pred cEEEEEEcCCCcEEE--ecCCeEEEec
Confidence 468999999999995 3344443444
No 64
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=75.27 E-value=4 Score=29.46 Aligned_cols=20 Identities=20% Similarity=0.436 Sum_probs=17.8
Q ss_pred CeEEEecccceEEEEEEeCC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQG 21 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~ 21 (91)
.++|||+|.|+..+++++.+
T Consensus 3 ~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred eEEEEECCccceeEEEEecc
Confidence 37999999999999998765
No 65
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=74.73 E-value=2.1 Score=32.03 Aligned_cols=18 Identities=28% Similarity=0.287 Sum_probs=15.9
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||||-||..|++++
T Consensus 69 ~~lalDlGGTn~Rv~~V~ 86 (451)
T 1bdg_A 69 NFLALDLGGTNYRVLSVT 86 (451)
T ss_dssp EEEEEEESSSSEEEEEEE
T ss_pred eEEEEEeCCCeEEEEEEe
Confidence 368999999999999875
No 66
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=73.40 E-value=3.4 Score=28.96 Aligned_cols=21 Identities=14% Similarity=0.235 Sum_probs=18.3
Q ss_pred CeEEEecccceEEEEEEe-CCe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ-QGK 22 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~-~~~ 22 (91)
+.+.||.|+||..+++++ +++
T Consensus 24 M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp EEEEEEECSSCEEEEEEETTTE
T ss_pred cEEEEEeCCCeeEEEEEeCCCE
Confidence 468999999999999998 664
No 67
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=72.42 E-value=2.3 Score=29.87 Aligned_cols=21 Identities=38% Similarity=0.615 Sum_probs=17.4
Q ss_pred CeEEEecccceEEEEEEe-CCe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ-QGK 22 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~-~~~ 22 (91)
.++|||+|+|+..+++++ +|+
T Consensus 31 ~~lgiDiGgt~i~~~l~d~~G~ 52 (343)
T 2yhw_A 31 SALAVDLGGTNLRVAIVSMKGE 52 (343)
T ss_dssp EEEEEEECSSEEEEEEEETTSC
T ss_pred EEEEEEECCCEEEEEEECCCCc
Confidence 478999999999999886 343
No 68
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=72.35 E-value=2.8 Score=29.88 Aligned_cols=20 Identities=15% Similarity=0.104 Sum_probs=17.1
Q ss_pred CCeEEEecccceEEEEEEeC
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~ 20 (91)
|.++|||+|.|++.+++++.
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEE
T ss_pred CeEEEEEEccccEEEEEEec
Confidence 35799999999999999763
No 69
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=72.32 E-value=3 Score=29.30 Aligned_cols=19 Identities=26% Similarity=0.310 Sum_probs=16.7
Q ss_pred CCeEEEecccceEEEEEEe
Q psy3438 1 MPAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~ 19 (91)
|.++|||+|.|+..+++++
T Consensus 24 ~~~lgiDiGgt~i~~~l~d 42 (327)
T 4db3_A 24 AMYYGFDVGGTKIEFGAFN 42 (327)
T ss_dssp CCEEEEEECSSEEEEEEEC
T ss_pred cEEEEEEECCCEEEEEEEe
Confidence 3478999999999999986
No 70
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=72.25 E-value=2.9 Score=28.81 Aligned_cols=19 Identities=42% Similarity=0.545 Sum_probs=16.6
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|.|++.+++++.
T Consensus 7 ~~lgiDiggt~~~~~l~d~ 25 (326)
T 2qm1_A 7 KIIGIDLGGTTIKFAILTT 25 (326)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEEECCCEEEEEEECC
Confidence 4789999999999999863
No 71
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=71.43 E-value=3 Score=31.35 Aligned_cols=17 Identities=18% Similarity=0.139 Sum_probs=15.6
Q ss_pred eEEEecccceEEEEEEe
Q psy3438 3 AIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~ 19 (91)
++|||+|-||..+++++
T Consensus 63 ~laiDlGGTnirv~lV~ 79 (457)
T 2yhx_A 63 FLAIVMGGGDLEVILIS 79 (457)
T ss_dssp EEEEEECSSEEEEEEEE
T ss_pred EEEEEeCCCeEEEEEEE
Confidence 68999999999999875
No 72
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=70.54 E-value=4.4 Score=28.96 Aligned_cols=20 Identities=30% Similarity=0.346 Sum_probs=17.3
Q ss_pred eEEEecccceEEEEEEeCCe
Q psy3438 3 AIGIDLGTTYSCVAVFQQGK 22 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~~~~ 22 (91)
.|+||-||||..+.++++++
T Consensus 8 ~IavDWGTs~lRa~l~~~g~ 27 (295)
T 3nuw_A 8 YIAIDWGSTNLRAWLYQGEE 27 (295)
T ss_dssp EEEEEECSSCEEEEEEETTE
T ss_pred EEEEEecchheeeeeecCCc
Confidence 68999999999998887664
No 73
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=69.03 E-value=4.2 Score=28.47 Aligned_cols=18 Identities=28% Similarity=0.231 Sum_probs=16.2
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||+|.|+..+++++
T Consensus 15 ~~lgiDiGGT~i~~~l~d 32 (332)
T 1sz2_A 15 YALVGDVGGTNARLALCD 32 (332)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred EEEEEEechhheEEEEEE
Confidence 368999999999999987
No 74
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=68.83 E-value=3.7 Score=31.25 Aligned_cols=17 Identities=29% Similarity=0.427 Sum_probs=15.5
Q ss_pred eEEEecccceEEEEEEe
Q psy3438 3 AIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~ 19 (91)
+++||||.||..|++++
T Consensus 82 ~LalDlGGTn~Rv~~V~ 98 (485)
T 3o8m_A 82 FLALDLGGTNLRVVLVK 98 (485)
T ss_dssp EEEEEESSSEEEEEEEE
T ss_pred EEEEEecCCeEEEEEEE
Confidence 68999999999999874
No 75
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=63.74 E-value=5.6 Score=27.59 Aligned_cols=18 Identities=33% Similarity=0.519 Sum_probs=16.2
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||+|.|++.+++++
T Consensus 25 ~~lgiDiGgt~i~~~l~d 42 (327)
T 2ap1_A 25 MYYGFDIGGTKIALGVFD 42 (327)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred eEEEEEECCCEEEEEEEe
Confidence 479999999999999986
No 76
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=63.66 E-value=5.9 Score=27.60 Aligned_cols=19 Identities=26% Similarity=0.375 Sum_probs=16.6
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|.|+..+++++.
T Consensus 20 ~~lgidiggt~i~~~l~d~ 38 (321)
T 3r8e_A 20 MILGIDVGGTSVKFGLVTP 38 (321)
T ss_dssp CEEEEECCSSEEEEEEECT
T ss_pred EEEEEEECCCEEEEEEEcC
Confidence 4689999999999999863
No 77
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=63.35 E-value=5.3 Score=27.84 Aligned_cols=19 Identities=21% Similarity=0.303 Sum_probs=16.7
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
.++|||+|.|+..+++++.
T Consensus 8 ~~lgiDiGgt~i~~~l~d~ 26 (310)
T 3htv_A 8 VVAGVDMGATHIRFCLRTA 26 (310)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEEeCCCEEEEEEECC
Confidence 4799999999999999863
No 78
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=62.68 E-value=5.2 Score=28.72 Aligned_cols=18 Identities=6% Similarity=0.052 Sum_probs=16.3
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||+|+|+..+++++
T Consensus 86 ~~lgiDiG~t~i~~~l~d 103 (406)
T 1z6r_A 86 HYLSLRISRGEIFLALRD 103 (406)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEcCCEEEEEEEc
Confidence 468999999999999986
No 79
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=62.05 E-value=6.1 Score=28.24 Aligned_cols=18 Identities=11% Similarity=0.259 Sum_probs=16.2
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||+|.|+..+++++
T Consensus 88 ~~lGIDiGgt~i~~~l~d 105 (380)
T 2hoe_A 88 YVLGIEVTRDEIAACLID 105 (380)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred eEEEEEECCCEEEEEEEC
Confidence 478999999999999986
No 80
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=61.76 E-value=9 Score=27.72 Aligned_cols=20 Identities=25% Similarity=0.328 Sum_probs=17.3
Q ss_pred CeEEEecccceEEEEEEeCC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQG 21 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~ 21 (91)
.++|||+|.|+..++++++|
T Consensus 10 ~~lgiDIGgt~i~~~l~d~G 29 (366)
T 3mcp_A 10 IVMTLDAGGTNFVFSAIQGG 29 (366)
T ss_dssp EEEEEECSSSEEEEEEEETT
T ss_pred EEEEEEECcceEEEEEEECC
Confidence 46899999999999998744
No 81
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=59.72 E-value=6.1 Score=32.11 Aligned_cols=18 Identities=28% Similarity=0.353 Sum_probs=16.0
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||||-||..|++++
T Consensus 527 ~~lalDlGGTn~Rv~~V~ 544 (917)
T 1cza_N 527 DFLALDLGGTNFRVLLVK 544 (917)
T ss_dssp EEEEEEESSSSEEEEEEE
T ss_pred EEEEEEECCCcEEEEEEE
Confidence 468999999999999874
No 82
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=59.54 E-value=6.2 Score=32.08 Aligned_cols=18 Identities=28% Similarity=0.294 Sum_probs=16.0
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||+|-||..+++++
T Consensus 79 ~~laiDlGGTnirv~lv~ 96 (917)
T 1cza_N 79 DFIALDLGGSSFRILRVQ 96 (917)
T ss_dssp EEEEEEESSSSEEEEEEE
T ss_pred eEEEEEeCCCeEEEEEEE
Confidence 368999999999999875
No 83
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=59.29 E-value=7.1 Score=29.61 Aligned_cols=17 Identities=29% Similarity=0.395 Sum_probs=15.3
Q ss_pred eEEEecccceEEEEEEe
Q psy3438 3 AIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~ 19 (91)
+++||||.||..|+.++
T Consensus 79 fLAlDlGGTNfRV~~V~ 95 (470)
T 3f9m_A 79 FLSLDLGGTNFRVMLVK 95 (470)
T ss_dssp EEEEEESSSEEEEEEEE
T ss_pred EEEEEecCceEEEEEEE
Confidence 68999999999999864
No 84
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=58.25 E-value=7.2 Score=29.40 Aligned_cols=17 Identities=29% Similarity=0.387 Sum_probs=15.4
Q ss_pred eEEEecccceEEEEEEe
Q psy3438 3 AIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~ 19 (91)
+++||||.||..|+.++
T Consensus 61 ~LAlDlGGTn~RV~~V~ 77 (445)
T 3hm8_A 61 FLALDLGGTNFRVLLVR 77 (445)
T ss_dssp EEEEEESSSSEEEEEEE
T ss_pred EEEEEecCCeEEEEEEE
Confidence 68999999999999875
No 85
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=56.90 E-value=9.5 Score=27.75 Aligned_cols=21 Identities=24% Similarity=0.550 Sum_probs=15.4
Q ss_pred CeEEEecccceEEEEEEe-CCe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ-QGK 22 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~-~~~ 22 (91)
.++|+|.|..|..++..+ +|.
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~g~ 22 (334)
T 3cet_A 1 MILGIDIGGANTKITELHENGE 22 (334)
T ss_dssp CEEEEEEC--CEEEEEECSTTC
T ss_pred CeeEEEecccceeeeeecCCCc
Confidence 478999999999999875 454
No 86
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=56.28 E-value=7.8 Score=28.12 Aligned_cols=18 Identities=22% Similarity=0.488 Sum_probs=16.1
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||+|.|+..+++++
T Consensus 109 ~~lGIDiGgt~i~~~l~d 126 (429)
T 1z05_A 109 QFLSMRLGRGYLTIALHE 126 (429)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred EEEEEEECCCEEEEEEEC
Confidence 368999999999999986
No 87
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=53.03 E-value=16 Score=25.74 Aligned_cols=27 Identities=33% Similarity=0.508 Sum_probs=19.7
Q ss_pred CCeEEEecccceEEEEEEe--CCeEEEEe
Q psy3438 1 MPAIGIDLGTTYSCVAVFQ--QGKVEIIA 27 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~--~~~~~il~ 27 (91)
|.+.+||+||.++.+.+++ ++.+.++.
T Consensus 12 m~~a~IDiGSns~rl~I~~~~~~~~~~i~ 40 (315)
T 1t6c_A 12 MRVASIDIGSYSVRLTIAQIKDGKLSIIL 40 (315)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEE
T ss_pred cEEEEEEECcCcEEEEEEEEcCCcEEEEe
Confidence 4577999999999887763 55555544
No 88
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=51.53 E-value=16 Score=24.53 Aligned_cols=23 Identities=26% Similarity=0.351 Sum_probs=19.2
Q ss_pred CCeEEEecccceEEEEEEeCCeE
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQGKV 23 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~~~ 23 (91)
|.+++||=-|..+.||++++++.
T Consensus 2 M~iLaIdTS~~~~svAl~~~~~~ 24 (213)
T 3r6m_A 2 AKILAIDTATENCSVALLVNDQV 24 (213)
T ss_dssp CCEEEEECSSSEEEEEEESSSCE
T ss_pred CEEEEEEccCcceEEEEEECCEE
Confidence 88999997777889999887653
No 89
>4dkw_A Large terminase protein; DNA-packaging, small terminase, nuclease FO endonuclease, DNA, DNA-packaging motor, hydrolase; 2.02A {Enterobacteria phage P22}
Probab=50.69 E-value=10 Score=25.41 Aligned_cols=13 Identities=15% Similarity=0.008 Sum_probs=10.6
Q ss_pred eEEEecccceEEE
Q psy3438 3 AIGIDLGTTYSCV 15 (91)
Q Consensus 3 ~iGIDfGTtns~v 15 (91)
.+|+|||+++..+
T Consensus 29 ~~G~DfG~~~P~a 41 (211)
T 4dkw_A 29 IDAQDFGWNHPQA 41 (211)
T ss_dssp EEEEECCSSSCEE
T ss_pred EEEEECCCCCCcE
Confidence 5799999998554
No 90
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=50.42 E-value=12 Score=27.07 Aligned_cols=19 Identities=16% Similarity=0.146 Sum_probs=16.3
Q ss_pred CeEEEecccceEEEEEEeC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~ 20 (91)
..|+||-||||..+.+++.
T Consensus 8 ~~IavDWGTSnlRa~l~~~ 26 (330)
T 3t69_A 8 YYAAVDWGTSSFRLWIIGE 26 (330)
T ss_dssp CEEEEEECSSCEEEEEECT
T ss_pred CEEEEEecchheehheecC
Confidence 4689999999999988863
No 91
>2nrh_A Transcriptional activator, putative, BAF family; structural genomics, unknown function, putative transcription activator, PSI-2; 2.30A {Campylobacter jejuni} SCOP: c.55.1.13 c.55.1.13
Probab=48.05 E-value=8.4 Score=26.12 Aligned_cols=21 Identities=19% Similarity=0.338 Sum_probs=13.9
Q ss_pred CCeEEEecccceEEEEEEeCCeE
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQGKV 23 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~~~ 23 (91)
|..+.||.|+||.. ++++++.
T Consensus 1 M~~L~iDiGNT~ik--~~~~~~l 21 (219)
T 2nrh_A 1 MSLLLCDIGNSNAN--FLDDNKY 21 (219)
T ss_dssp --CCEEEECSSEEE--EEC--CE
T ss_pred CCEEEEEeCCCEEE--EEECCEE
Confidence 66789999999999 5555544
No 92
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=48.02 E-value=2.5 Score=31.28 Aligned_cols=20 Identities=30% Similarity=0.270 Sum_probs=14.8
Q ss_pred CeEEEecccceEEEEEEeCC
Q psy3438 2 PAIGIDLGTTYSCVAVFQQG 21 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~~~ 21 (91)
..|-||.||.++.+....+.
T Consensus 6 ~~iViDnGs~~~KaG~ag~~ 25 (427)
T 3dwl_A 6 VPIIMDNGTGYSKLGYAGND 25 (427)
T ss_dssp SCEEECCCSSBC-CEETTSS
T ss_pred CeEEEECCCCeEEEEECCCC
Confidence 46889999999998875333
No 93
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=47.41 E-value=15 Score=26.97 Aligned_cols=18 Identities=28% Similarity=0.303 Sum_probs=14.6
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++|||+||+..++.+.+
T Consensus 9 ~ivglDIGts~I~~vv~~ 26 (419)
T 4a2a_A 9 FYTSIDIGSRYIKGLVLG 26 (419)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEccCCEEEEEEEE
Confidence 468999999999877653
No 94
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=44.24 E-value=16 Score=28.77 Aligned_cols=24 Identities=25% Similarity=0.272 Sum_probs=17.4
Q ss_pred CeEEEecccceEEEEEE--eCCeEEE
Q psy3438 2 PAIGIDLGTTYSCVAVF--QQGKVEI 25 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~--~~~~~~i 25 (91)
.++|||.|||..++++- .+++.++
T Consensus 3 ~i~GiDIGnsttev~l~~~~~g~i~~ 28 (607)
T 1nbw_A 3 LIAGIDIGNATTEVALASDYPQARAF 28 (607)
T ss_dssp EEEEEEECSSEEEEEEEECBTTBCCC
T ss_pred EEEEEEecCceEEEEEEEEcCCeEEE
Confidence 36799999999998874 3454443
No 95
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=42.48 E-value=18 Score=24.42 Aligned_cols=14 Identities=21% Similarity=0.456 Sum_probs=12.5
Q ss_pred CeEEEecccceEEE
Q psy3438 2 PAIGIDLGTTYSCV 15 (91)
Q Consensus 2 ~~iGIDfGTtns~v 15 (91)
.++|||+|.|+..+
T Consensus 7 ~~lgiDIGGT~i~~ 20 (226)
T 3lm2_A 7 TVLAIDIGGSHVKI 20 (226)
T ss_dssp CEEEEEECSSEEEE
T ss_pred EEEEEEECCCEEEE
Confidence 47999999999995
No 96
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=40.44 E-value=22 Score=25.22 Aligned_cols=22 Identities=9% Similarity=0.277 Sum_probs=18.6
Q ss_pred CCeEEEecccceEEEEEEeCCe
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQGK 22 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~~ 22 (91)
|.++|||=-+..+++|++++++
T Consensus 6 M~iLgIdts~~~~svAl~~~~~ 27 (334)
T 3eno_A 6 MIVLGLEGTAHTISCGIIDESR 27 (334)
T ss_dssp CEEEEEECSSSEEEEEEEESSC
T ss_pred ceEEEEECCCcCeEEEEEECCE
Confidence 7889999777889999988764
No 97
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=40.07 E-value=19 Score=28.27 Aligned_cols=17 Identities=35% Similarity=0.589 Sum_probs=14.7
Q ss_pred eEEEecccceEEEEEEe
Q psy3438 3 AIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~ 19 (91)
-++||+|||.-++.+++
T Consensus 208 GlAvDiGTTtv~~~Lvd 224 (631)
T 3zyy_X 208 GLAIDIGTTTVVVQLVD 224 (631)
T ss_dssp EEEEEECSSEEEEEEEE
T ss_pred EEEEEecccceeEEEEE
Confidence 47899999999988875
No 98
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=39.86 E-value=22 Score=24.80 Aligned_cols=18 Identities=28% Similarity=0.385 Sum_probs=15.9
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.+++||+|+-|-..|..+
T Consensus 41 sIlSID~GikNlAyc~l~ 58 (258)
T 1kcf_A 41 RVLGIDLGIKNFSYCFAS 58 (258)
T ss_dssp SEEEEEECSTTEEEEEEE
T ss_pred cEEEEecCCCceEEEEEc
Confidence 478999999999999875
No 99
>2wbn_A G2P, terminase large subunit; large terminase, nuclease, viral protein, DNA packaging; 1.90A {Bacillus phage SPP1} PDB: 2wc9_A
Probab=36.71 E-value=18 Score=24.03 Aligned_cols=9 Identities=33% Similarity=0.637 Sum_probs=8.0
Q ss_pred eEEEecccc
Q psy3438 3 AIGIDLGTT 11 (91)
Q Consensus 3 ~iGIDfGTt 11 (91)
.+|+|||++
T Consensus 52 ~~G~DfG~~ 60 (212)
T 2wbn_A 52 RQGLDFGYG 60 (212)
T ss_dssp EEEEECCBT
T ss_pred EEEEECCCC
Confidence 689999996
No 100
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=34.43 E-value=39 Score=26.57 Aligned_cols=27 Identities=30% Similarity=0.468 Sum_probs=16.2
Q ss_pred CCeEEEecccceEEEE--EEeC-CeEEEEe
Q psy3438 1 MPAIGIDLGTTYSCVA--VFQQ-GKVEIIA 27 (91)
Q Consensus 1 m~~iGIDfGTtns~va--~~~~-~~~~il~ 27 (91)
-.+.|||.|++.+=+| -..+ +.++.+.
T Consensus 2 ~~i~gvdign~tte~~la~~~~~~~~~f~~ 31 (610)
T 2d0o_A 2 RYIAGIDIGNSSTEVALATLDEAGALTITH 31 (610)
T ss_dssp EEEEEEEECSSEEEEEEEEECTTCCEEEEE
T ss_pred cEEEEEecCCcchheeeeeecCCCceEEee
Confidence 0367999996555554 4443 5555554
No 101
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=30.95 E-value=32 Score=20.79 Aligned_cols=23 Identities=26% Similarity=0.288 Sum_probs=16.5
Q ss_pred CCeeeeEEEEEcCCe---eeeccchh
Q psy3438 31 GNRTTPSYVAFTDTE---RLIGLRKF 53 (91)
Q Consensus 31 g~~~~PS~V~~~~~~---~~vG~~A~ 53 (91)
+-..+|++|.|.+|+ +++|..-.
T Consensus 73 ~V~g~PT~i~f~~G~ev~Ri~G~~~~ 98 (116)
T 3dml_A 73 PVTFTPTFVLMAGDVESGRLEGYPGE 98 (116)
T ss_dssp CCCSSSEEEEEETTEEEEEEECCCCH
T ss_pred CCCCCCEEEEEECCEEEeeecCCCCH
Confidence 345789999999763 67776544
No 102
>4ich_A Transcriptional regulator; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, transcription RE; 1.95A {Saccharomonospora viridis}
Probab=30.61 E-value=11 Score=25.75 Aligned_cols=13 Identities=38% Similarity=0.585 Sum_probs=0.0
Q ss_pred eEEEecccceEEE
Q psy3438 3 AIGIDLGTTYSCV 15 (91)
Q Consensus 3 ~iGIDfGTtns~v 15 (91)
.-|+||||+|--.
T Consensus 8 ~~~~~~~~~~~~~ 20 (311)
T 4ich_A 8 SSGVDLGTENLYF 20 (311)
T ss_dssp -------------
T ss_pred ccccccCcceeee
Confidence 3589999999764
No 103
>4hl9_A Antibiotic biosynthesis monooxygenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.93A {Rhodospirillum rubrum}
Probab=26.71 E-value=14 Score=22.43 Aligned_cols=10 Identities=50% Similarity=0.737 Sum_probs=0.0
Q ss_pred EEEecccceE
Q psy3438 4 IGIDLGTTYS 13 (91)
Q Consensus 4 iGIDfGTtns 13 (91)
-||||||.|.
T Consensus 9 ~~~d~~~en~ 18 (118)
T 4hl9_A 9 SGVDLGTENL 18 (118)
T ss_dssp ----------
T ss_pred CCccccchhh
Confidence 5999999995
No 104
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=26.13 E-value=1e+02 Score=21.49 Aligned_cols=27 Identities=19% Similarity=0.172 Sum_probs=18.9
Q ss_pred CeEEEecccceEEEEEE--eCCeEEEEec
Q psy3438 2 PAIGIDLGTTYSCVAVF--QQGKVEIIAN 28 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~--~~~~~~il~~ 28 (91)
.+..||+||-+..+.++ .++.+.++..
T Consensus 5 ~~A~IDiGSNsirL~I~~~~~~~~~~i~~ 33 (315)
T 3mdq_A 5 RIGVIDMGTNTFHLLITDIVNDRPHTLVN 33 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEE
T ss_pred eEEEEEecCCcEEEEEEEEcCCceEEeee
Confidence 46799999988877765 3555655543
No 105
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=26.12 E-value=37 Score=21.33 Aligned_cols=23 Identities=26% Similarity=0.450 Sum_probs=17.6
Q ss_pred CCeeeeEEEEEcCCe---eeeccchh
Q psy3438 31 GNRTTPSYVAFTDTE---RLIGLRKF 53 (91)
Q Consensus 31 g~~~~PS~V~~~~~~---~~vG~~A~ 53 (91)
+=+.+|+++.|.+|+ +++|...+
T Consensus 88 gV~sIPTlilFk~G~~v~~~~G~~~k 113 (140)
T 2qgv_A 88 GAFRFPATLVFTGGNYRGVLNGIHPW 113 (140)
T ss_dssp TCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred CCccCCEEEEEECCEEEEEEecCCCH
Confidence 567899999999874 67775443
No 106
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=26.02 E-value=37 Score=21.24 Aligned_cols=23 Identities=13% Similarity=0.296 Sum_probs=17.8
Q ss_pred CCeeeeEEEEEcCCe---eeeccchh
Q psy3438 31 GNRTTPSYVAFTDTE---RLIGLRKF 53 (91)
Q Consensus 31 g~~~~PS~V~~~~~~---~~vG~~A~ 53 (91)
+=+.+|+++.|.+|+ +++|...+
T Consensus 86 gV~siPTlilFkdG~~v~~~vG~~~k 111 (137)
T 2qsi_A 86 GVAVCPSLAVVQPERTLGVIAKIQDW 111 (137)
T ss_dssp TCCSSSEEEEEECCEEEEEEESCCCH
T ss_pred CCccCCEEEEEECCEEEEEEeCCCCH
Confidence 557899999999874 67776554
No 107
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=25.92 E-value=51 Score=23.99 Aligned_cols=20 Identities=30% Similarity=0.612 Sum_probs=17.6
Q ss_pred CCeEEEecccceEEEEEEeC
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQ 20 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~ 20 (91)
|+.+|||.|.|=..++.+.+
T Consensus 3 ~~~~~iDiGGtL~Klvy~~~ 22 (360)
T 2i7n_A 3 FPWFGMDIGGTLVKLVYFEP 22 (360)
T ss_dssp CCEEEEEECSSEEEEEEEEE
T ss_pred CCEEEEEeCCceEEEEEEee
Confidence 68899999999999998754
No 108
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=24.28 E-value=68 Score=23.93 Aligned_cols=21 Identities=14% Similarity=0.270 Sum_probs=17.9
Q ss_pred CCeEEEecccceEEEEEEeCC
Q psy3438 1 MPAIGIDLGTTYSCVAVFQQG 21 (91)
Q Consensus 1 m~~iGIDfGTtns~va~~~~~ 21 (91)
|.++|||--+-.++||+++++
T Consensus 6 m~iL~i~ts~~~~~~al~~~~ 26 (540)
T 3en9_A 6 MICLGLEGTAEKTGVGIVTSD 26 (540)
T ss_dssp CEEEEEECSSSEEEEEEEETT
T ss_pred ceEEEEEcCccceEEEEEECC
Confidence 678999988888899998876
No 109
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=24.15 E-value=19 Score=23.06 Aligned_cols=8 Identities=63% Similarity=1.082 Sum_probs=3.1
Q ss_pred EEecccce
Q psy3438 5 GIDLGTTY 12 (91)
Q Consensus 5 GIDfGTtn 12 (91)
|+||||.|
T Consensus 10 ~~~~~~~~ 17 (168)
T 3f0w_A 10 GVDLGTEN 17 (168)
T ss_dssp --CCCCCC
T ss_pred cccccccc
Confidence 45555544
No 110
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=23.62 E-value=61 Score=23.22 Aligned_cols=18 Identities=28% Similarity=0.288 Sum_probs=15.0
Q ss_pred CeEEEecccceEEEEEEe
Q psy3438 2 PAIGIDLGTTYSCVAVFQ 19 (91)
Q Consensus 2 ~~iGIDfGTtns~va~~~ 19 (91)
.++.||.|++.+.+.+++
T Consensus 4 ~~avID~GSns~Rl~I~~ 21 (353)
T 3aap_A 4 CIAVIDAGSTGSRLHIYS 21 (353)
T ss_dssp EEEEEEECSSCEEEEEEE
T ss_pred EEEEEEcCCCCeEEEEEE
Confidence 367899999999988863
No 111
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=22.10 E-value=57 Score=24.36 Aligned_cols=25 Identities=20% Similarity=0.057 Sum_probs=20.0
Q ss_pred eEEEecccceEEEEEEeCCeEEEEe
Q psy3438 3 AIGIDLGTTYSCVAVFQQGKVEIIA 27 (91)
Q Consensus 3 ~iGIDfGTtns~va~~~~~~~~il~ 27 (91)
+|-||-|+.|..++...+..|..++
T Consensus 17 iIVIdpGS~~~riG~A~d~~P~~iP 41 (593)
T 4fo0_A 17 IIVIHPGSTTLRIGRATDTLPASIP 41 (593)
T ss_dssp EEEEECCSSEEEEEETTCSSCEEEE
T ss_pred EEEEeCCCCCeEeeecCCCCCCeee
Confidence 7899999999999987665565554
No 112
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=21.42 E-value=20 Score=26.16 Aligned_cols=10 Identities=50% Similarity=0.737 Sum_probs=0.0
Q ss_pred EEEecccceE
Q psy3438 4 IGIDLGTTYS 13 (91)
Q Consensus 4 iGIDfGTtns 13 (91)
=|+||||-|-
T Consensus 9 sgvdlgtenL 18 (412)
T 4h1z_A 9 SGVDLGTENL 18 (412)
T ss_dssp ----------
T ss_pred cccCcchhhH
Confidence 4899999974
Done!