Query psy3441
Match_columns 100
No_of_seqs 157 out of 1727
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 16:47:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3441.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3441hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uem_A Protein disulfide-isome 99.7 3.3E-17 1.1E-21 115.7 8.4 92 9-100 195-296 (361)
2 3idv_A Protein disulfide-isome 99.7 1.7E-16 5.7E-21 105.9 6.7 85 9-99 91-175 (241)
3 3zzx_A Thioredoxin; oxidoreduc 99.6 5.7E-16 2E-20 93.2 6.5 47 54-100 2-49 (105)
4 2av4_A Thioredoxin-like protei 99.6 5.7E-16 1.9E-20 99.7 5.7 47 54-100 23-70 (160)
5 3h79_A Thioredoxin-like protei 99.6 1.2E-15 4.3E-20 93.4 5.4 47 52-99 15-61 (127)
6 3f8u_A Protein disulfide-isome 99.6 2.4E-15 8.3E-20 109.6 6.9 92 9-100 300-399 (481)
7 3apo_A DNAJ homolog subfamily 99.6 7.9E-15 2.7E-19 112.4 9.5 80 9-99 619-703 (780)
8 2ywm_A Glutaredoxin-like prote 99.6 1.3E-15 4.5E-20 101.4 3.6 83 9-100 83-165 (229)
9 2b5e_A Protein disulfide-isome 99.6 9.1E-15 3.1E-19 107.3 7.8 73 27-99 326-404 (504)
10 3evi_A Phosducin-like protein 99.5 1.5E-14 5E-19 88.9 6.0 47 53-100 4-52 (118)
11 3ed3_A Protein disulfide-isome 99.5 2.5E-14 8.6E-19 99.7 7.6 50 50-100 15-64 (298)
12 3gix_A Thioredoxin-like protei 99.5 1.6E-14 5.4E-19 91.5 6.0 46 55-100 6-52 (149)
13 1gh2_A Thioredoxin-like protei 99.5 3E-14 1E-18 84.6 6.7 47 54-100 3-50 (107)
14 1a8l_A Protein disulfide oxido 99.5 3.1E-15 1.1E-19 99.2 2.2 81 9-99 80-162 (226)
15 2djj_A PDI, protein disulfide- 99.5 6.2E-15 2.1E-19 89.1 2.6 46 53-99 8-53 (121)
16 3qfa_C Thioredoxin; protein-pr 99.5 3.8E-14 1.3E-18 85.8 6.1 46 55-100 14-60 (116)
17 3gnj_A Thioredoxin domain prot 99.5 7.5E-14 2.6E-18 82.8 7.1 47 53-100 5-51 (111)
18 3apo_A DNAJ homolog subfamily 99.5 5.1E-14 1.8E-18 107.9 7.3 80 9-100 511-592 (780)
19 1x5d_A Protein disulfide-isome 99.5 5E-14 1.7E-18 86.2 5.7 46 53-99 8-53 (133)
20 1w4v_A Thioredoxin, mitochondr 99.5 1E-13 3.5E-18 84.0 7.0 49 52-100 12-60 (119)
21 2dbc_A PDCL2, unnamed protein 99.5 1E-13 3.6E-18 86.1 7.1 49 51-100 9-59 (135)
22 1qgv_A Spliceosomal protein U5 99.5 3.8E-14 1.3E-18 89.1 5.0 45 55-99 6-51 (142)
23 3f3q_A Thioredoxin-1; His TAG, 99.5 1.2E-13 4.1E-18 82.6 7.0 46 54-100 8-53 (109)
24 2pu9_C TRX-F, thioredoxin F-ty 99.5 9.4E-14 3.2E-18 82.9 6.5 47 53-100 6-53 (111)
25 2dml_A Protein disulfide-isome 99.5 1.1E-13 3.6E-18 84.6 6.6 48 52-100 17-64 (130)
26 2vlu_A Thioredoxin, thioredoxi 99.5 1.8E-13 6E-18 82.8 6.9 49 52-100 12-63 (122)
27 3d6i_A Monothiol glutaredoxin- 99.5 1.2E-13 4.2E-18 82.4 6.0 46 54-99 2-49 (112)
28 1xfl_A Thioredoxin H1; AT3G510 99.5 2.2E-13 7.5E-18 83.4 7.3 50 51-100 15-67 (124)
29 3hxs_A Thioredoxin, TRXP; elec 99.5 1.1E-13 3.6E-18 85.8 5.8 48 52-100 22-80 (141)
30 3aps_A DNAJ homolog subfamily 99.5 1.2E-13 4.1E-18 83.5 5.8 46 53-99 4-49 (122)
31 3q6o_A Sulfhydryl oxidase 1; p 99.5 6.4E-14 2.2E-18 94.4 5.0 47 53-100 13-59 (244)
32 1ep7_A Thioredoxin CH1, H-type 99.4 3E-13 1E-17 80.4 7.1 48 53-100 3-53 (112)
33 2trx_A Thioredoxin; electron t 99.4 1.3E-13 4.4E-18 81.6 5.3 46 54-100 4-49 (108)
34 1zma_A Bacterocin transport ac 99.4 1.4E-13 4.7E-18 83.1 5.5 43 56-99 15-57 (118)
35 3tco_A Thioredoxin (TRXA-1); d 99.4 1.5E-13 5E-18 81.1 5.4 45 55-100 6-50 (109)
36 2dj0_A Thioredoxin-related tra 99.4 1E-13 3.5E-18 85.9 4.9 47 53-100 8-55 (137)
37 1dby_A Chloroplast thioredoxin 99.4 2.6E-13 8.9E-18 80.1 6.3 45 55-100 4-48 (107)
38 2dj1_A Protein disulfide-isome 99.4 1.7E-13 5.8E-18 84.7 5.6 46 52-99 17-62 (140)
39 2xc2_A Thioredoxinn; oxidoredu 99.4 2.5E-13 8.6E-18 81.8 6.2 47 54-100 15-62 (117)
40 3dxb_A Thioredoxin N-terminall 99.4 1.6E-13 5.5E-18 91.5 5.9 47 54-100 13-59 (222)
41 3uvt_A Thioredoxin domain-cont 99.4 1.9E-13 6.5E-18 81.0 5.6 45 53-100 6-50 (111)
42 2dj3_A Protein disulfide-isome 99.4 2.3E-14 7.9E-19 87.9 1.4 47 52-99 7-53 (133)
43 3cxg_A Putative thioredoxin; m 99.4 1.2E-13 4.3E-18 85.5 4.7 49 51-99 19-68 (133)
44 4euy_A Uncharacterized protein 99.4 2.2E-14 7.6E-19 85.1 1.2 44 56-100 4-47 (105)
45 2oe3_A Thioredoxin-3; electron 99.4 2.1E-13 7.1E-18 82.4 5.5 48 52-100 12-59 (114)
46 2f51_A Thioredoxin; electron t 99.4 4.4E-13 1.5E-17 81.3 6.9 47 54-100 5-52 (118)
47 1ti3_A Thioredoxin H, PTTRXH1; 99.4 4.9E-13 1.7E-17 79.5 7.0 49 52-100 4-55 (113)
48 3qou_A Protein YBBN; thioredox 99.4 8.7E-14 3E-18 95.3 4.2 46 53-99 8-54 (287)
49 1faa_A Thioredoxin F; electron 99.4 3.8E-13 1.3E-17 81.6 6.6 47 53-100 19-66 (124)
50 3m9j_A Thioredoxin; oxidoreduc 99.4 4.4E-13 1.5E-17 78.8 6.6 46 55-100 3-49 (105)
51 2l5l_A Thioredoxin; structural 99.4 5.3E-13 1.8E-17 82.6 7.2 48 52-100 9-67 (136)
52 1r26_A Thioredoxin; redox-acti 99.4 4.3E-13 1.5E-17 82.4 6.4 46 54-100 21-66 (125)
53 3d22_A TRXH4, thioredoxin H-ty 99.4 6.5E-13 2.2E-17 82.1 7.3 50 51-100 23-75 (139)
54 1xwb_A Thioredoxin; dimerizati 99.4 5.7E-13 2E-17 78.3 6.7 47 54-100 2-49 (106)
55 2vm1_A Thioredoxin, thioredoxi 99.4 5.7E-13 2E-17 79.8 6.7 49 52-100 6-57 (118)
56 3emx_A Thioredoxin; structural 99.4 4.7E-13 1.6E-17 82.9 6.3 44 53-100 17-60 (135)
57 1t00_A Thioredoxin, TRX; redox 99.4 2.8E-13 9.5E-18 80.7 5.1 46 54-100 7-52 (112)
58 2wz9_A Glutaredoxin-3; protein 99.4 5.5E-13 1.9E-17 84.2 6.7 49 52-100 12-61 (153)
59 2vim_A Thioredoxin, TRX; thior 99.4 7.6E-13 2.6E-17 77.5 6.8 46 55-100 2-48 (104)
60 2j23_A Thioredoxin; immune pro 99.4 7E-13 2.4E-17 80.6 6.9 50 50-100 13-62 (121)
61 3hz4_A Thioredoxin; NYSGXRC, P 99.4 3.1E-13 1.1E-17 84.1 5.4 46 53-99 7-52 (140)
62 1nsw_A Thioredoxin, TRX; therm 99.4 4.2E-13 1.4E-17 79.0 5.6 44 55-100 3-46 (105)
63 1syr_A Thioredoxin; SGPP, stru 99.4 6.7E-13 2.3E-17 79.4 6.4 46 54-100 10-55 (112)
64 1thx_A Thioredoxin, thioredoxi 99.4 6E-13 2E-17 79.2 6.1 47 53-100 8-54 (115)
65 1fb6_A Thioredoxin M; electron 99.4 3.8E-13 1.3E-17 78.9 5.1 43 58-100 5-47 (105)
66 1a0r_P Phosducin, MEKA, PP33; 99.4 6.1E-13 2.1E-17 90.8 6.7 49 52-100 112-162 (245)
67 3die_A Thioredoxin, TRX; elect 99.4 4.6E-13 1.6E-17 78.7 5.3 45 53-100 4-48 (106)
68 3idv_A Protein disulfide-isome 99.4 3.9E-13 1.3E-17 89.5 5.5 47 51-99 14-60 (241)
69 2i4a_A Thioredoxin; acidophIle 99.4 3.8E-13 1.3E-17 79.1 4.8 45 54-99 4-48 (107)
70 2o8v_B Thioredoxin 1; disulfid 99.4 4.1E-13 1.4E-17 82.7 5.1 47 53-100 23-69 (128)
71 2hls_A Protein disulfide oxido 99.4 1.6E-13 5.4E-18 93.1 3.4 79 9-99 88-166 (243)
72 2qsi_A Putative hydrogenase ex 99.4 3.3E-13 1.1E-17 85.0 4.4 45 55-100 18-64 (137)
73 2r2j_A Thioredoxin domain-cont 99.4 2.2E-13 7.6E-18 97.3 4.1 45 53-99 6-50 (382)
74 1mek_A Protein disulfide isome 99.4 3.5E-13 1.2E-17 80.6 4.2 46 53-100 8-53 (120)
75 2i1u_A Thioredoxin, TRX, MPT46 99.4 7.8E-13 2.7E-17 79.6 5.6 47 53-100 13-59 (121)
76 2voc_A Thioredoxin; electron t 99.4 4.7E-13 1.6E-17 80.2 4.6 43 54-99 3-45 (112)
77 2ppt_A Thioredoxin-2; thiredox 99.4 1E-12 3.4E-17 83.5 6.1 46 53-100 48-93 (155)
78 2trc_P Phosducin, MEKA, PP33; 99.4 1.2E-12 4.2E-17 87.7 6.6 49 52-100 99-149 (217)
79 1x5e_A Thioredoxin domain cont 99.4 7.1E-13 2.4E-17 80.7 5.0 44 52-99 7-50 (126)
80 2yzu_A Thioredoxin; redox prot 99.4 1.1E-12 3.9E-17 77.1 5.6 45 54-100 3-47 (109)
81 3p2a_A Thioredoxin 2, putative 99.4 1E-12 3.5E-17 82.2 5.7 46 53-100 39-84 (148)
82 3ga4_A Dolichyl-diphosphooligo 99.4 7.9E-13 2.7E-17 86.5 4.9 48 52-100 18-73 (178)
83 2e0q_A Thioredoxin; electron t 99.3 1.2E-12 4.2E-17 76.2 5.2 42 58-100 4-45 (104)
84 2b5e_A Protein disulfide-isome 99.3 1.3E-12 4.4E-17 95.9 6.3 47 52-100 14-60 (504)
85 2l6c_A Thioredoxin; oxidoreduc 99.3 7E-13 2.4E-17 79.3 3.5 44 55-100 5-48 (110)
86 1wou_A Thioredoxin -related pr 99.3 3.2E-12 1.1E-16 78.0 6.5 47 54-100 6-60 (123)
87 2qgv_A Hydrogenase-1 operon pr 99.3 1.9E-12 6.4E-17 81.8 5.2 43 57-100 21-65 (140)
88 3apq_A DNAJ homolog subfamily 99.3 4.4E-12 1.5E-16 83.7 7.0 46 53-100 98-143 (210)
89 1z6n_A Hypothetical protein PA 99.3 2.7E-12 9.2E-17 83.0 5.7 42 59-100 42-83 (167)
90 3uem_A Protein disulfide-isome 99.3 5E-12 1.7E-16 89.1 7.2 81 9-100 83-164 (361)
91 3iv4_A Putative oxidoreductase 99.3 6.2E-12 2.1E-16 76.7 6.5 45 53-98 7-51 (112)
92 3t58_A Sulfhydryl oxidase 1; o 99.3 2.8E-12 9.6E-17 95.4 5.5 47 53-100 13-59 (519)
93 2fwh_A Thiol:disulfide interch 99.3 6.3E-12 2.1E-16 77.6 5.9 48 53-100 12-63 (134)
94 3f8u_A Protein disulfide-isome 99.3 4.8E-12 1.7E-16 92.2 5.5 46 54-100 3-50 (481)
95 3kp8_A Vkorc1/thioredoxin doma 99.3 1.6E-12 5.4E-17 78.2 2.2 29 72-100 13-41 (106)
96 1wmj_A Thioredoxin H-type; str 99.3 2.1E-12 7.2E-17 78.6 2.5 49 52-100 14-65 (130)
97 1v98_A Thioredoxin; oxidoreduc 99.2 8.2E-12 2.8E-16 77.4 4.1 46 53-100 34-79 (140)
98 1sji_A Calsequestrin 2, calseq 99.2 8E-12 2.8E-16 88.1 4.5 46 52-100 11-63 (350)
99 1oaz_A Thioredoxin 1; immune s 99.2 3.1E-12 1.1E-16 78.3 1.9 46 54-100 5-64 (123)
100 3qcp_A QSOX from trypanosoma b 99.2 8.4E-12 2.9E-16 92.0 3.5 48 52-100 23-71 (470)
101 2yj7_A LPBCA thioredoxin; oxid 98.8 1.9E-12 6.7E-17 75.6 0.0 43 58-100 6-48 (106)
102 3ul3_B Thioredoxin, thioredoxi 99.2 1.3E-11 4.5E-16 75.4 3.6 31 69-99 40-70 (128)
103 3us3_A Calsequestrin-1; calciu 99.2 3.3E-11 1.1E-15 85.8 5.8 46 52-99 13-64 (367)
104 3fk8_A Disulphide isomerase; A 99.2 2.8E-11 9.7E-16 74.1 4.7 41 59-99 14-59 (133)
105 1sen_A Thioredoxin-like protei 99.2 3.7E-11 1.3E-15 76.9 4.9 37 61-98 37-73 (164)
106 2l57_A Uncharacterized protein 99.1 1.2E-11 4.2E-16 75.1 1.8 31 70-100 25-55 (126)
107 3ph9_A Anterior gradient prote 99.1 7.2E-11 2.5E-15 75.2 5.1 27 70-96 43-69 (151)
108 3f9u_A Putative exported cytoc 99.1 7.7E-11 2.6E-15 75.2 4.4 32 59-90 32-66 (172)
109 2kuc_A Putative disulphide-iso 99.1 6.1E-11 2.1E-15 72.2 2.4 40 59-98 12-57 (130)
110 3raz_A Thioredoxin-related pro 99.0 2.6E-10 8.8E-15 71.1 4.3 31 70-100 23-53 (151)
111 1un2_A DSBA, thiol-disulfide i 99.0 6.1E-10 2.1E-14 73.5 6.0 30 71-100 113-145 (197)
112 1fo5_A Thioredoxin; disulfide 99.0 2.1E-10 7.3E-15 64.7 2.9 29 72-100 3-31 (85)
113 2h30_A Thioredoxin, peptide me 99.0 2.9E-10 1E-14 71.3 3.8 40 59-99 27-66 (164)
114 2es7_A Q8ZP25_salty, putative 99.0 2.1E-10 7E-15 72.2 2.9 44 55-100 20-65 (142)
115 4fo5_A Thioredoxin-like protei 99.0 4.3E-10 1.5E-14 69.5 4.3 31 70-100 31-61 (143)
116 3eur_A Uncharacterized protein 99.0 2.5E-10 8.6E-15 70.5 3.2 29 71-99 31-62 (142)
117 1i5g_A Tryparedoxin II; electr 99.0 3.2E-10 1.1E-14 70.0 3.6 30 70-99 27-56 (144)
118 3ira_A Conserved protein; meth 99.0 3.9E-10 1.3E-14 73.3 4.0 32 59-91 28-59 (173)
119 1o8x_A Tryparedoxin, TRYX, TXN 99.0 4.1E-10 1.4E-14 69.8 3.7 30 70-99 27-56 (146)
120 2lst_A Thioredoxin; structural 98.5 6.6E-11 2.3E-15 72.1 0.0 37 62-99 11-50 (130)
121 3s9f_A Tryparedoxin; thioredox 99.0 4.1E-10 1.4E-14 71.7 3.6 30 71-100 48-77 (165)
122 1ilo_A Conserved hypothetical 99.0 4.6E-10 1.6E-14 62.5 3.4 27 74-100 2-28 (77)
123 3lor_A Thiol-disulfide isomera 98.9 6.8E-10 2.3E-14 69.4 4.3 30 71-100 30-60 (160)
124 3eyt_A Uncharacterized protein 98.9 6.4E-10 2.2E-14 69.4 4.1 30 71-100 28-58 (158)
125 1o73_A Tryparedoxin; electron 98.9 5.8E-10 2E-14 68.6 3.7 30 70-99 27-56 (144)
126 2djk_A PDI, protein disulfide- 98.9 1.3E-09 4.3E-14 67.3 5.0 44 54-100 8-51 (133)
127 3erw_A Sporulation thiol-disul 98.9 9.5E-10 3.2E-14 67.3 4.3 31 70-100 33-63 (145)
128 1zzo_A RV1677; thioredoxin fol 98.9 6.9E-10 2.3E-14 67.1 3.5 31 70-100 24-54 (136)
129 1lu4_A Soluble secreted antige 98.9 1.2E-09 4.2E-14 66.2 4.6 31 70-100 23-53 (136)
130 1nho_A Probable thioredoxin; b 98.9 3E-10 1E-14 64.1 1.4 27 73-99 3-29 (85)
131 2e7p_A Glutaredoxin; thioredox 98.9 2E-09 6.7E-14 64.4 5.1 36 61-99 11-46 (116)
132 2b1k_A Thiol:disulfide interch 98.9 1.4E-09 4.6E-14 68.8 4.2 29 70-98 50-78 (168)
133 2b5x_A YKUV protein, TRXY; thi 98.9 7.9E-10 2.7E-14 67.8 2.9 40 59-99 18-57 (148)
134 3fkf_A Thiol-disulfide oxidore 98.9 5.6E-10 1.9E-14 68.6 2.2 31 70-100 32-62 (148)
135 3ewl_A Uncharacterized conserv 98.9 7.8E-10 2.7E-14 67.9 2.7 30 70-99 26-58 (142)
136 3kij_A Probable glutathione pe 98.9 9.3E-10 3.2E-14 70.8 3.1 31 70-100 37-67 (180)
137 2ju5_A Thioredoxin disulfide i 98.9 2.1E-09 7.3E-14 67.7 4.7 29 70-98 46-78 (154)
138 2f8a_A Glutathione peroxidase 98.9 9.9E-10 3.4E-14 72.8 3.1 31 70-100 46-76 (208)
139 3or5_A Thiol:disulfide interch 98.9 1E-09 3.6E-14 68.7 3.1 30 70-99 33-62 (165)
140 2c0g_A ERP29 homolog, windbeut 98.9 1.6E-09 5.5E-14 74.0 3.9 42 53-100 17-60 (248)
141 4evm_A Thioredoxin family prot 98.9 2.2E-09 7.6E-14 64.6 4.0 30 70-99 21-50 (138)
142 3lwa_A Secreted thiol-disulfid 98.9 1.6E-09 5.6E-14 69.4 3.6 31 70-100 58-88 (183)
143 2lrn_A Thiol:disulfide interch 98.8 1.5E-09 5.2E-14 67.6 3.2 30 70-99 28-57 (152)
144 2lrt_A Uncharacterized protein 98.8 1.6E-09 5.4E-14 67.9 3.3 30 71-100 35-64 (152)
145 3ha9_A Uncharacterized thiored 98.8 2.2E-09 7.4E-14 67.6 3.9 31 70-100 36-66 (165)
146 2f9s_A Thiol-disulfide oxidore 98.8 2E-09 6.7E-14 66.8 3.6 30 70-99 25-54 (151)
147 2v1m_A Glutathione peroxidase; 98.8 1.6E-09 5.4E-14 68.2 3.1 30 70-99 30-59 (169)
148 3kp9_A Vkorc1/thioredoxin doma 98.8 2.2E-09 7.4E-14 74.9 3.7 38 60-100 189-226 (291)
149 2p31_A CL683, glutathione pero 98.8 1.9E-09 6.4E-14 69.4 3.1 31 70-100 48-78 (181)
150 2p5q_A Glutathione peroxidase 98.8 2E-09 6.7E-14 67.8 3.1 30 70-99 31-60 (170)
151 3dwv_A Glutathione peroxidase- 98.8 1.3E-09 4.4E-14 70.6 2.3 31 70-100 45-75 (187)
152 3hdc_A Thioredoxin family prot 98.8 3.7E-09 1.3E-13 66.3 4.3 31 70-100 40-70 (158)
153 2lus_A Thioredoxion; CR-Trp16, 98.3 5.1E-10 1.7E-14 68.7 0.0 30 71-100 25-55 (143)
154 3kcm_A Thioredoxin family prot 98.8 5.3E-09 1.8E-13 64.9 4.3 31 70-100 27-57 (154)
155 3hcz_A Possible thiol-disulfid 98.8 1.2E-09 4.1E-14 67.1 1.3 30 70-99 30-59 (148)
156 2l5o_A Putative thioredoxin; s 98.8 4.1E-09 1.4E-13 65.3 3.7 31 70-100 27-57 (153)
157 1kng_A Thiol:disulfide interch 98.8 4.9E-09 1.7E-13 65.0 4.0 28 71-98 42-69 (156)
158 3ia1_A THIO-disulfide isomeras 98.8 4.4E-09 1.5E-13 65.3 3.7 29 72-100 31-59 (154)
159 3gl3_A Putative thiol:disulfid 98.8 4.2E-09 1.5E-13 65.2 3.5 31 70-100 27-57 (152)
160 3kh7_A Thiol:disulfide interch 98.8 6.9E-09 2.4E-13 66.6 4.4 29 71-99 58-86 (176)
161 2lja_A Putative thiol-disulfid 98.8 4.6E-09 1.6E-13 65.0 3.3 30 71-100 30-59 (152)
162 2cvb_A Probable thiol-disulfid 98.8 6.5E-09 2.2E-13 66.9 4.0 30 71-100 33-62 (188)
163 2vup_A Glutathione peroxidase- 98.8 4.8E-09 1.6E-13 68.0 3.4 30 70-99 47-76 (190)
164 2qc7_A ERP31, ERP28, endoplasm 98.7 8.7E-09 3E-13 70.0 4.7 41 53-99 6-48 (240)
165 3dml_A Putative uncharacterize 98.7 4.2E-09 1.4E-13 64.4 2.9 24 71-94 18-41 (116)
166 1jfu_A Thiol:disulfide interch 98.7 6E-09 2.1E-13 66.8 3.6 30 70-99 59-88 (186)
167 3cmi_A Peroxiredoxin HYR1; thi 98.7 3.3E-09 1.1E-13 67.5 2.3 29 70-99 31-59 (171)
168 2obi_A PHGPX, GPX-4, phospholi 98.7 5E-09 1.7E-13 67.4 3.1 31 70-100 46-76 (183)
169 2gs3_A PHGPX, GPX-4, phospholi 98.7 5.3E-09 1.8E-13 67.5 3.1 31 70-100 48-78 (185)
170 4f9z_D Endoplasmic reticulum r 98.7 5.6E-08 1.9E-12 64.8 8.2 81 9-100 75-160 (227)
171 1hyu_A AHPF, alkyl hydroperoxi 98.7 3.2E-08 1.1E-12 73.2 7.6 81 8-100 62-146 (521)
172 2k6v_A Putative cytochrome C o 98.7 9.8E-09 3.4E-13 64.7 3.6 31 70-100 34-65 (172)
173 3fw2_A Thiol-disulfide oxidore 98.7 7.6E-09 2.6E-13 64.2 2.9 30 71-100 33-64 (150)
174 1a8l_A Protein disulfide oxido 98.7 1.1E-08 3.8E-13 67.4 3.3 41 59-99 8-51 (226)
175 3us3_A Calsequestrin-1; calciu 98.7 5.8E-08 2E-12 69.0 7.0 77 9-99 93-169 (367)
176 2rli_A SCO2 protein homolog, m 98.7 1.1E-08 3.7E-13 64.6 2.9 29 71-99 26-55 (171)
177 2ls5_A Uncharacterized protein 98.1 2.6E-09 8.9E-14 66.9 0.0 29 71-99 33-62 (159)
178 1sji_A Calsequestrin 2, calseq 98.7 1.6E-07 5.4E-12 66.1 8.9 77 9-100 91-168 (350)
179 2hyx_A Protein DIPZ; thioredox 98.7 1.5E-08 5E-13 72.3 3.6 30 71-100 82-111 (352)
180 2ywi_A Hypothetical conserved 98.6 1.6E-08 5.5E-13 65.2 3.5 29 71-99 45-74 (196)
181 2ggt_A SCO1 protein homolog, m 98.6 1.5E-08 5.1E-13 63.4 3.0 29 71-99 23-52 (164)
182 2fgx_A Putative thioredoxin; N 98.6 3E-08 1E-12 59.8 4.1 28 72-99 29-56 (107)
183 2k8s_A Thioredoxin; dimer, str 98.6 2.4E-08 8.1E-13 56.4 3.0 26 74-99 3-28 (80)
184 1xvw_A Hypothetical protein RV 98.6 2.7E-08 9.3E-13 62.2 3.5 30 71-100 35-66 (160)
185 3u5r_E Uncharacterized protein 98.6 2.4E-08 8.1E-13 66.2 3.2 30 71-100 58-88 (218)
186 2i3y_A Epididymal secretory gl 98.6 3E-08 1E-12 66.2 3.2 30 70-100 55-84 (215)
187 3drn_A Peroxiredoxin, bacterio 98.6 3.8E-08 1.3E-12 62.0 3.4 30 71-100 28-59 (161)
188 1xzo_A BSSCO, hypothetical pro 98.5 3.5E-08 1.2E-12 62.3 2.2 30 70-99 32-62 (174)
189 2r37_A Glutathione peroxidase 98.5 5.2E-08 1.8E-12 64.6 2.7 30 70-100 37-66 (207)
190 2jsy_A Probable thiol peroxida 98.5 6.6E-08 2.3E-12 61.0 3.0 30 71-100 44-74 (167)
191 1wjk_A C330018D20RIK protein; 98.5 4E-08 1.4E-12 58.0 1.9 27 72-98 16-42 (100)
192 3hd5_A Thiol:disulfide interch 98.5 1.4E-07 4.7E-12 61.2 4.4 30 71-100 25-54 (195)
193 1we0_A Alkyl hydroperoxide red 98.5 4.5E-08 1.5E-12 63.1 2.0 29 71-99 31-60 (187)
194 2b7k_A SCO1 protein; metalloch 98.5 7.9E-08 2.7E-12 62.8 3.1 29 71-99 41-70 (200)
195 1eej_A Thiol:disulfide interch 98.5 9.4E-08 3.2E-12 63.4 3.2 28 71-98 86-113 (216)
196 2bmx_A Alkyl hydroperoxidase C 98.5 5.5E-08 1.9E-12 63.2 2.0 29 71-99 45-74 (195)
197 1qmv_A Human thioredoxin perox 98.4 8.5E-08 2.9E-12 62.3 2.7 30 71-100 34-64 (197)
198 1zof_A Alkyl hydroperoxide-red 98.4 4.9E-08 1.7E-12 63.5 1.6 29 71-99 33-62 (198)
199 2ywm_A Glutaredoxin-like prote 98.4 2E-07 6.9E-12 61.6 4.2 40 60-99 8-53 (229)
200 3hz8_A Thiol:disulfide interch 98.4 2.5E-07 8.5E-12 60.4 4.4 30 71-100 24-53 (193)
201 3gkn_A Bacterioferritin comigr 98.4 2.4E-07 8.3E-12 58.0 3.5 29 71-99 35-64 (163)
202 3ztl_A Thioredoxin peroxidase; 98.4 1.9E-07 6.4E-12 62.1 2.8 31 70-100 68-99 (222)
203 3h93_A Thiol:disulfide interch 98.3 4.7E-07 1.6E-11 58.5 4.5 31 70-100 24-54 (192)
204 1uul_A Tryparedoxin peroxidase 98.3 2.1E-07 7.3E-12 60.7 2.8 30 71-100 36-66 (202)
205 1kte_A Thioltransferase; redox 98.3 2.7E-07 9.2E-12 54.2 2.9 36 61-99 3-38 (105)
206 1psq_A Probable thiol peroxida 98.3 3.8E-07 1.3E-11 57.5 3.6 30 71-100 42-72 (163)
207 2h01_A 2-Cys peroxiredoxin; th 98.3 1.5E-07 5E-12 60.9 1.7 30 71-100 31-61 (192)
208 2pn8_A Peroxiredoxin-4; thiore 98.3 2.7E-07 9.3E-12 61.0 2.7 29 71-99 48-77 (211)
209 2yzh_A Probable thiol peroxida 98.3 4.4E-07 1.5E-11 57.5 3.6 30 71-100 47-77 (171)
210 2i81_A 2-Cys peroxiredoxin; st 98.3 2.9E-07 1E-11 60.9 2.8 30 71-100 52-82 (213)
211 2hls_A Protein disulfide oxido 98.3 4.5E-07 1.5E-11 61.2 3.8 43 57-99 11-55 (243)
212 2c0d_A Thioredoxin peroxidase 98.3 2.2E-07 7.5E-12 62.0 2.2 30 71-100 56-86 (221)
213 1xvq_A Thiol peroxidase; thior 98.3 3.1E-07 1.1E-11 58.7 2.7 28 71-98 44-72 (175)
214 3gyk_A 27KDA outer membrane pr 98.3 8.1E-07 2.8E-11 56.4 4.4 29 71-99 22-50 (175)
215 1q98_A Thiol peroxidase, TPX; 98.3 3.3E-07 1.1E-11 58.0 2.4 30 71-100 43-73 (165)
216 1tp9_A Peroxiredoxin, PRX D (t 98.3 6E-07 2.1E-11 56.7 3.5 29 71-99 35-65 (162)
217 1zye_A Thioredoxin-dependent p 98.2 3.7E-07 1.3E-11 60.6 2.2 30 71-100 56-86 (220)
218 2a4v_A Peroxiredoxin DOT5; yea 98.2 6.5E-07 2.2E-11 56.1 3.2 28 72-99 36-64 (159)
219 2wfc_A Peroxiredoxin 5, PRDX5; 98.2 7.8E-07 2.7E-11 56.8 3.5 29 71-99 31-61 (167)
220 1t3b_A Thiol:disulfide interch 98.2 6.5E-07 2.2E-11 59.2 3.2 28 71-98 86-113 (211)
221 1n8j_A AHPC, alkyl hydroperoxi 98.2 6.4E-07 2.2E-11 57.9 3.0 29 71-99 30-59 (186)
222 2cq9_A GLRX2 protein, glutared 98.2 1.6E-06 5.6E-11 53.3 4.4 37 59-98 16-52 (130)
223 2pwj_A Mitochondrial peroxired 98.2 3.7E-07 1.3E-11 58.5 1.5 28 72-99 45-73 (171)
224 1nm3_A Protein HI0572; hybrid, 98.2 9E-07 3.1E-11 59.2 3.4 29 71-99 33-63 (241)
225 3l9v_A Putative thiol-disulfid 98.2 8.1E-07 2.8E-11 57.7 2.8 28 72-99 15-45 (189)
226 1h75_A Glutaredoxin-like prote 98.2 1.3E-06 4.3E-11 48.9 3.3 23 75-97 3-25 (81)
227 3rhb_A ATGRXC5, glutaredoxin-C 98.2 2.6E-06 8.9E-11 50.8 4.8 37 60-99 9-45 (113)
228 3me7_A Putative uncharacterize 98.2 8.6E-07 2.9E-11 56.5 2.8 29 71-99 28-57 (170)
229 3ixr_A Bacterioferritin comigr 98.2 1.1E-06 3.6E-11 56.5 3.2 30 71-100 51-81 (179)
230 2ht9_A Glutaredoxin-2; thiored 98.2 2.5E-06 8.6E-11 53.7 4.7 37 59-98 38-74 (146)
231 3feu_A Putative lipoprotein; a 98.2 7.9E-07 2.7E-11 57.7 2.4 29 71-99 22-50 (185)
232 2r2j_A Thioredoxin domain-cont 98.2 2.9E-06 1E-10 60.3 5.5 76 9-99 84-160 (382)
233 4g2e_A Peroxiredoxin; redox pr 98.2 1.8E-07 6.2E-12 59.0 -0.7 30 70-99 29-59 (157)
234 3zrd_A Thiol peroxidase; oxido 98.1 1.8E-06 6.1E-11 56.6 2.6 31 70-100 77-108 (200)
235 3p7x_A Probable thiol peroxida 98.1 2.8E-06 9.5E-11 53.6 3.4 28 71-98 46-74 (166)
236 1r7h_A NRDH-redoxin; thioredox 98.0 4.8E-06 1.6E-10 45.6 3.3 23 75-97 3-25 (75)
237 3qpm_A Peroxiredoxin; oxidored 98.0 3.2E-06 1.1E-10 57.0 2.9 31 70-100 76-107 (240)
238 2dlx_A UBX domain-containing p 98.0 7E-06 2.4E-10 52.1 4.3 31 61-91 29-62 (153)
239 3uma_A Hypothetical peroxiredo 98.0 4.7E-06 1.6E-10 54.2 3.5 28 72-99 57-86 (184)
240 2hze_A Glutaredoxin-1; thiored 98.0 2.3E-06 7.8E-11 51.3 1.6 26 73-98 19-44 (114)
241 3mng_A Peroxiredoxin-5, mitoch 97.9 4.8E-06 1.7E-10 53.6 3.0 29 71-99 43-73 (173)
242 4gqc_A Thiol peroxidase, perox 97.9 3.4E-07 1.2E-11 58.3 -2.6 36 63-99 26-62 (164)
243 3nzn_A Glutaredoxin; structura 97.9 6.4E-06 2.2E-10 48.4 3.1 27 72-98 21-47 (103)
244 3ed3_A Protein disulfide-isome 97.9 2.9E-05 1E-09 53.7 6.8 77 9-100 93-186 (298)
245 4hde_A SCO1/SENC family lipopr 97.9 6.4E-06 2.2E-10 52.5 3.2 30 70-99 31-61 (170)
246 2znm_A Thiol:disulfide interch 97.9 4.5E-06 1.5E-10 53.8 2.0 30 71-100 22-51 (195)
247 3c1r_A Glutaredoxin-1; oxidize 97.9 7.5E-06 2.6E-10 49.5 2.8 34 61-97 16-50 (118)
248 1v58_A Thiol:disulfide interch 97.9 1.5E-05 5.1E-10 53.6 4.3 28 71-98 97-124 (241)
249 3tjj_A Peroxiredoxin-4; thiore 97.8 5.4E-06 1.8E-10 56.5 1.7 30 71-100 91-121 (254)
250 2klx_A Glutaredoxin; thioredox 97.8 8.5E-06 2.9E-10 46.4 1.8 24 74-97 7-30 (89)
251 2rem_A Disulfide oxidoreductas 97.8 2.8E-05 9.6E-10 49.9 4.4 30 71-100 25-54 (193)
252 3h8q_A Thioredoxin reductase 3 97.8 3.5E-05 1.2E-09 46.1 4.4 36 60-98 7-42 (114)
253 2yan_A Glutaredoxin-3; oxidore 97.8 4.1E-05 1.4E-09 45.1 4.5 35 60-97 7-46 (105)
254 1prx_A HORF6; peroxiredoxin, h 97.7 2.1E-05 7.1E-10 52.5 3.1 28 73-100 34-61 (224)
255 3qmx_A Glutaredoxin A, glutare 97.7 3.7E-05 1.3E-09 45.1 3.8 27 72-98 15-41 (99)
256 1fov_A Glutaredoxin 3, GRX3; a 97.7 3.3E-05 1.1E-09 42.9 3.4 23 75-97 3-25 (82)
257 1z6m_A Conserved hypothetical 97.7 3.7E-05 1.3E-09 48.7 3.6 29 71-99 27-55 (175)
258 3ic4_A Glutaredoxin (GRX-1); s 97.7 2.7E-05 9.1E-10 44.4 2.6 24 75-98 14-37 (92)
259 2khp_A Glutaredoxin; thioredox 97.6 3.8E-05 1.3E-09 43.7 3.3 24 74-97 7-30 (92)
260 2v2g_A Peroxiredoxin 6; oxidor 97.6 2.9E-05 9.8E-10 52.3 3.1 28 72-99 30-58 (233)
261 3a2v_A Probable peroxiredoxin; 97.6 1.7E-05 5.7E-10 54.0 1.9 29 72-100 34-63 (249)
262 3msz_A Glutaredoxin 1; alpha-b 97.6 5E-05 1.7E-09 42.7 3.3 24 74-97 5-28 (89)
263 1xcc_A 1-Cys peroxiredoxin; un 97.6 2.6E-05 8.9E-10 51.9 1.8 27 73-99 34-60 (220)
264 3ctg_A Glutaredoxin-2; reduced 97.5 8.9E-05 3E-09 45.5 3.3 36 59-97 26-62 (129)
265 3l9s_A Thiol:disulfide interch 97.5 6.1E-05 2.1E-09 49.0 2.7 28 72-99 22-52 (191)
266 2l4c_A Endoplasmic reticulum r 97.4 0.00039 1.3E-08 42.5 5.7 44 53-100 22-65 (124)
267 4f9z_D Endoplasmic reticulum r 97.4 0.00024 8.1E-09 47.0 4.8 45 52-100 9-53 (227)
268 3l4n_A Monothiol glutaredoxin- 97.3 0.0004 1.4E-08 42.6 4.9 34 60-96 4-37 (127)
269 2c0g_A ERP29 homolog, windbeut 97.2 0.00052 1.8E-08 46.6 5.3 73 9-100 97-173 (248)
270 1wik_A Thioredoxin-like protei 97.2 0.00036 1.2E-08 41.3 3.4 34 61-97 6-44 (109)
271 3c7m_A Thiol:disulfide interch 97.1 0.0005 1.7E-08 43.8 4.1 29 71-99 17-46 (195)
272 4dvc_A Thiol:disulfide interch 97.1 0.00076 2.6E-08 42.4 4.5 30 71-100 21-50 (184)
273 4f82_A Thioredoxin reductase; 97.0 0.00051 1.7E-08 44.5 3.1 36 63-99 41-77 (176)
274 2lqo_A Putative glutaredoxin R 97.0 0.00045 1.5E-08 40.1 2.6 24 74-97 5-28 (92)
275 3gv1_A Disulfide interchange p 96.9 0.00049 1.7E-08 43.1 2.6 26 71-96 14-39 (147)
276 3keb_A Probable thiol peroxida 96.9 0.00043 1.5E-08 46.5 2.3 26 71-96 48-79 (224)
277 1nm3_A Protein HI0572; hybrid, 96.8 0.0033 1.1E-07 41.6 6.4 24 74-97 171-194 (241)
278 2h8l_A Protein disulfide-isome 96.5 0.006 2.1E-07 40.7 5.5 78 9-100 73-162 (252)
279 3ec3_A Protein disulfide-isome 96.4 0.0097 3.3E-07 39.8 6.5 79 9-100 74-166 (250)
280 2wci_A Glutaredoxin-4; redox-a 96.3 0.0042 1.4E-07 38.4 3.5 36 60-97 25-64 (135)
281 3sbc_A Peroxiredoxin TSA1; alp 96.2 0.0034 1.2E-07 41.9 2.9 29 71-99 52-81 (216)
282 3gha_A Disulfide bond formatio 95.5 0.015 5E-07 37.9 3.8 27 71-97 29-56 (202)
283 3tdg_A DSBG, putative uncharac 95.4 0.015 5.2E-07 40.0 3.9 27 71-97 147-173 (273)
284 3zyw_A Glutaredoxin-3; metal b 95.4 0.012 4.1E-07 34.9 3.0 33 62-97 8-45 (111)
285 3bci_A Disulfide bond protein 95.4 0.025 8.6E-07 35.8 4.6 29 71-99 11-40 (186)
286 3ipz_A Monothiol glutaredoxin- 95.3 0.026 8.8E-07 33.2 4.1 33 62-97 10-47 (109)
287 2h8l_A Protein disulfide-isome 95.2 0.053 1.8E-06 36.1 6.1 44 53-100 7-50 (252)
288 3gx8_A Monothiol glutaredoxin- 95.1 0.034 1.1E-06 33.4 4.4 33 62-97 8-45 (121)
289 2wem_A Glutaredoxin-related pr 95.1 0.033 1.1E-06 33.5 4.3 34 61-97 11-49 (118)
290 3ec3_A Protein disulfide-isome 94.7 0.055 1.9E-06 36.0 4.9 44 53-99 7-50 (250)
291 3f4s_A Alpha-DSBA1, putative u 94.6 0.026 8.8E-07 37.5 3.1 28 71-98 39-67 (226)
292 1mek_A Protein disulfide isome 94.4 0.052 1.8E-06 31.0 3.9 33 9-41 83-117 (120)
293 3tue_A Tryparedoxin peroxidase 94.3 0.013 4.5E-07 39.1 1.2 29 71-99 56-85 (219)
294 2ct6_A SH3 domain-binding glut 94.3 0.032 1.1E-06 32.9 2.7 22 75-96 10-37 (111)
295 2wz9_A Glutaredoxin-3; protein 94.2 0.024 8.2E-07 34.8 2.2 57 9-70 87-143 (153)
296 1xiy_A Peroxiredoxin, pfaop; a 94.1 0.039 1.3E-06 35.6 3.0 29 71-99 43-73 (182)
297 2voc_A Thioredoxin; electron t 94.0 0.057 1.9E-06 31.1 3.4 35 9-43 73-107 (112)
298 3h79_A Thioredoxin-like protei 94.0 0.036 1.2E-06 32.7 2.5 31 9-39 94-126 (127)
299 3uvt_A Thioredoxin domain-cont 93.9 0.026 9E-07 32.0 1.8 31 9-39 80-110 (111)
300 3gn3_A Putative protein-disulf 93.8 0.037 1.3E-06 35.5 2.6 28 71-98 14-41 (182)
301 2axo_A Hypothetical protein AT 93.6 0.067 2.3E-06 36.8 3.7 28 72-99 43-70 (270)
302 1zma_A Bacterocin transport ac 93.5 0.067 2.3E-06 31.0 3.2 30 9-38 89-118 (118)
303 2qc7_A ERP31, ERP28, endoplasm 93.2 0.056 1.9E-06 36.3 2.7 32 9-40 85-118 (240)
304 2ec4_A FAS-associated factor 1 93.1 0.081 2.8E-06 34.0 3.3 31 61-91 38-75 (178)
305 2x8g_A Thioredoxin glutathione 93.1 0.11 3.7E-06 38.7 4.4 34 61-97 9-42 (598)
306 3gmf_A Protein-disulfide isome 93.0 0.14 4.7E-06 33.4 4.3 26 71-96 15-40 (205)
307 2djj_A PDI, protein disulfide- 92.8 0.11 3.8E-06 29.9 3.3 33 9-41 83-117 (121)
308 4eo3_A Bacterioferritin comigr 92.7 0.096 3.3E-06 36.5 3.4 25 71-95 24-49 (322)
309 2dj1_A Protein disulfide-isome 92.5 0.11 3.7E-06 30.9 3.1 33 9-42 93-125 (140)
310 3ul3_B Thioredoxin, thioredoxi 92.5 0.096 3.3E-06 30.8 2.8 30 9-38 98-127 (128)
311 3die_A Thioredoxin, TRX; elect 92.3 0.094 3.2E-06 29.3 2.5 31 9-39 75-105 (106)
312 4euy_A Uncharacterized protein 92.1 0.097 3.3E-06 29.6 2.4 31 9-39 73-103 (105)
313 1oaz_A Thioredoxin 1; immune s 92.1 0.11 3.7E-06 30.7 2.7 31 9-39 91-121 (123)
314 2l6c_A Thioredoxin; oxidoreduc 91.9 0.11 3.8E-06 29.8 2.5 33 9-41 74-106 (110)
315 3zzx_A Thioredoxin; oxidoreduc 91.8 0.06 2E-06 31.3 1.3 30 9-39 75-104 (105)
316 2es7_A Q8ZP25_salty, putative 91.7 0.11 3.9E-06 31.8 2.5 33 9-41 93-125 (142)
317 3gnj_A Thioredoxin domain prot 91.5 0.11 3.7E-06 29.4 2.2 31 9-39 78-108 (111)
318 3dml_A Putative uncharacterize 91.5 0.11 3.8E-06 31.2 2.3 32 8-39 77-108 (116)
319 2xhf_A Peroxiredoxin 5; oxidor 91.5 0.084 2.9E-06 33.7 1.8 29 71-99 42-71 (171)
320 2yzu_A Thioredoxin; redox prot 91.4 0.13 4.6E-06 28.7 2.5 33 9-41 74-106 (109)
321 3p2a_A Thioredoxin 2, putative 91.2 0.14 4.9E-06 30.8 2.6 33 9-41 111-143 (148)
322 2i4a_A Thioredoxin; acidophIle 91.1 0.1 3.5E-06 29.2 1.8 31 9-39 76-106 (107)
323 1x5e_A Thioredoxin domain cont 90.8 0.23 8E-06 28.9 3.3 32 9-41 79-110 (126)
324 1aba_A Glutaredoxin; electron 90.8 0.1 3.5E-06 28.9 1.6 17 81-97 12-28 (87)
325 2i1u_A Thioredoxin, TRX, MPT46 90.8 0.16 5.5E-06 29.2 2.5 32 9-40 86-117 (121)
326 3q6o_A Sulfhydryl oxidase 1; p 90.5 0.82 2.8E-05 29.9 6.0 80 9-90 91-176 (244)
327 2e0q_A Thioredoxin; electron t 90.4 0.16 5.5E-06 28.0 2.2 31 9-39 71-101 (104)
328 1nsw_A Thioredoxin, TRX; therm 90.4 0.19 6.4E-06 28.1 2.5 31 9-39 73-103 (105)
329 3tco_A Thioredoxin (TRXA-1); d 90.4 0.16 5.5E-06 28.4 2.2 31 9-39 77-107 (109)
330 1x5d_A Protein disulfide-isome 90.3 0.2 6.9E-06 29.2 2.6 32 9-40 85-116 (133)
331 3hz4_A Thioredoxin; NYSGXRC, P 90.1 0.17 5.7E-06 30.4 2.2 32 9-40 80-111 (140)
332 2trx_A Thioredoxin; electron t 89.6 0.2 6.8E-06 28.1 2.2 30 9-38 76-105 (108)
333 2qgv_A Hydrogenase-1 operon pr 89.4 0.2 6.8E-06 31.1 2.2 32 9-40 93-124 (140)
334 2jad_A Yellow fluorescent prot 89.4 0.27 9.3E-06 35.1 3.1 22 75-96 263-285 (362)
335 1thx_A Thioredoxin, thioredoxi 89.1 0.23 7.8E-06 28.1 2.2 31 9-39 81-111 (115)
336 2qsi_A Putative hydrogenase ex 88.9 0.23 7.9E-06 30.7 2.1 32 9-40 91-122 (137)
337 2wul_A Glutaredoxin related pr 88.7 0.61 2.1E-05 28.0 3.9 36 59-97 9-49 (118)
338 2dml_A Protein disulfide-isome 88.6 0.44 1.5E-05 27.7 3.3 32 9-40 91-123 (130)
339 1v98_A Thioredoxin; oxidoreduc 88.5 0.26 8.8E-06 29.3 2.2 31 9-39 106-136 (140)
340 1dby_A Chloroplast thioredoxin 88.4 0.32 1.1E-05 27.2 2.5 31 9-39 75-105 (107)
341 2ppt_A Thioredoxin-2; thiredox 88.4 0.26 8.8E-06 30.3 2.2 32 9-40 120-151 (155)
342 3m9j_A Thioredoxin; oxidoreduc 88.3 0.2 6.7E-06 27.9 1.5 29 9-38 75-103 (105)
343 1t00_A Thioredoxin, TRX; redox 88.2 0.26 9E-06 27.8 2.0 31 9-39 79-109 (112)
344 1w4v_A Thioredoxin, mitochondr 88.1 0.28 9.7E-06 28.3 2.2 31 9-39 87-117 (119)
345 1syr_A Thioredoxin; SGPP, stru 88.0 0.34 1.1E-05 27.6 2.4 30 9-39 81-110 (112)
346 3apq_A DNAJ homolog subfamily 88.0 0.47 1.6E-05 30.3 3.3 32 9-40 170-201 (210)
347 3qfa_C Thioredoxin; protein-pr 87.7 0.26 8.8E-06 28.5 1.8 29 9-38 86-114 (116)
348 2o8v_B Thioredoxin 1; disulfid 87.5 0.32 1.1E-05 28.7 2.2 30 9-38 96-125 (128)
349 1xwb_A Thioredoxin; dimerizati 87.2 0.28 9.7E-06 27.2 1.7 29 9-38 76-104 (106)
350 1fb6_A Thioredoxin M; electron 87.1 0.3 1E-05 27.1 1.8 30 9-38 74-103 (105)
351 2l5l_A Thioredoxin; structural 86.8 0.4 1.4E-05 28.4 2.3 34 9-43 94-128 (136)
352 2yj7_A LPBCA thioredoxin; oxid 86.5 0.14 4.6E-06 28.5 0.0 30 9-38 75-104 (106)
353 2l57_A Uncharacterized protein 86.3 0.76 2.6E-05 26.6 3.3 36 9-44 84-120 (126)
354 2vim_A Thioredoxin, TRX; thior 86.0 0.32 1.1E-05 26.9 1.5 29 9-38 74-102 (104)
355 1ep7_A Thioredoxin CH1, H-type 85.2 0.49 1.7E-05 26.6 2.1 30 9-39 80-109 (112)
356 3emx_A Thioredoxin; structural 84.7 0.63 2.2E-05 27.6 2.4 33 8-41 94-126 (135)
357 3t58_A Sulfhydryl oxidase 1; o 84.6 1.4 4.9E-05 32.6 4.8 73 9-82 91-168 (519)
358 3dxb_A Thioredoxin N-terminall 83.8 0.63 2.2E-05 30.1 2.3 33 9-41 86-118 (222)
359 2oe3_A Thioredoxin-3; electron 83.4 0.67 2.3E-05 26.6 2.1 29 9-38 85-113 (114)
360 2in3_A Hypothetical protein; D 82.9 2 6.9E-05 27.2 4.5 27 72-98 7-33 (216)
361 2j23_A Thioredoxin; immune pro 82.8 0.7 2.4E-05 26.7 2.0 30 9-39 90-119 (121)
362 3hxs_A Thioredoxin, TRXP; elec 82.5 0.8 2.7E-05 27.0 2.3 31 9-40 107-138 (141)
363 2xc2_A Thioredoxinn; oxidoredu 82.1 0.79 2.7E-05 26.1 2.1 29 9-38 87-115 (117)
364 2vlu_A Thioredoxin, thioredoxi 81.9 0.78 2.7E-05 26.2 2.0 30 9-39 89-118 (122)
365 1r26_A Thioredoxin; redox-acti 81.7 0.82 2.8E-05 26.9 2.1 30 9-39 92-121 (125)
366 2kuc_A Putative disulphide-iso 81.7 0.81 2.8E-05 26.5 2.0 34 9-42 88-122 (130)
367 1gh2_A Thioredoxin-like protei 81.5 0.45 1.5E-05 26.7 0.8 30 9-39 76-105 (107)
368 2lst_A Thioredoxin; structural 81.7 0.33 1.1E-05 28.3 0.0 35 9-43 80-118 (130)
369 3f3q_A Thioredoxin-1; His TAG, 80.6 0.96 3.3E-05 25.6 2.0 29 9-38 79-107 (109)
370 3ia1_A THIO-disulfide isomeras 80.2 1.5 5.1E-05 26.0 2.9 37 6-42 109-145 (154)
371 3raz_A Thioredoxin-related pro 80.2 2.2 7.4E-05 25.3 3.7 36 6-41 105-140 (151)
372 3evi_A Phosducin-like protein 78.9 1.3 4.6E-05 26.1 2.4 31 9-39 75-112 (118)
373 2dbc_A PDCL2, unnamed protein 78.5 2.1 7.2E-05 25.3 3.2 32 9-40 82-120 (135)
374 2fwh_A Thiol:disulfide interch 77.6 3.8 0.00013 23.9 4.2 32 9-40 93-127 (134)
375 3ga4_A Dolichyl-diphosphooligo 77.6 1.5 5E-05 28.1 2.4 34 9-42 105-154 (178)
376 2vm1_A Thioredoxin, thioredoxi 77.5 1.4 4.7E-05 24.8 2.1 31 9-40 83-113 (118)
377 2h30_A Thioredoxin, peptide me 76.8 2.7 9.4E-05 25.0 3.4 35 7-41 122-156 (164)
378 2av4_A Thioredoxin-like protei 76.8 2.8 9.5E-05 26.5 3.5 32 8-39 96-137 (160)
379 3d6i_A Monothiol glutaredoxin- 75.6 2.2 7.4E-05 23.9 2.6 30 9-39 78-107 (112)
380 2dj0_A Thioredoxin-related tra 75.4 0.18 6.1E-06 30.0 -2.3 31 9-39 89-119 (137)
381 2pu9_C TRX-F, thioredoxin F-ty 75.1 1.9 6.6E-05 24.1 2.3 29 9-38 80-108 (111)
382 1faa_A Thioredoxin F; electron 74.8 1.7 5.8E-05 24.9 2.0 30 9-39 93-122 (124)
383 1xfl_A Thioredoxin H1; AT3G510 74.7 1.8 6.1E-05 25.2 2.1 30 9-39 93-122 (124)
384 3aps_A DNAJ homolog subfamily 73.8 1.2 4.2E-05 25.4 1.2 32 9-40 77-112 (122)
385 3d22_A TRXH4, thioredoxin H-ty 73.6 1.9 6.5E-05 25.2 2.1 31 9-40 101-131 (139)
386 2trc_P Phosducin, MEKA, PP33; 72.9 1.9 6.4E-05 28.1 2.0 31 9-39 174-211 (217)
387 3f9u_A Putative exported cytoc 72.9 4.8 0.00016 24.4 3.9 34 6-39 130-164 (172)
388 3qou_A Protein YBBN; thioredox 72.8 2 6.7E-05 28.5 2.2 32 9-40 82-113 (287)
389 3or5_A Thiol:disulfide interch 72.7 4.2 0.00014 24.1 3.5 35 7-41 117-151 (165)
390 3gix_A Thioredoxin-like protei 72.1 2.5 8.5E-05 25.6 2.3 31 9-39 79-119 (149)
391 3lwa_A Secreted thiol-disulfid 72.0 4.1 0.00014 25.0 3.4 33 7-39 147-179 (183)
392 1kng_A Thiol:disulfide interch 70.9 3.2 0.00011 24.4 2.6 32 7-38 118-149 (156)
393 2djk_A PDI, protein disulfide- 70.2 4.1 0.00014 23.9 3.0 31 9-40 80-114 (133)
394 3erw_A Sporulation thiol-disul 69.6 3.5 0.00012 23.7 2.6 30 8-37 116-145 (145)
395 2b1k_A Thiol:disulfide interch 69.0 3.4 0.00012 24.8 2.5 33 7-39 126-158 (168)
396 4evm_A Thioredoxin family prot 68.2 4.6 0.00016 22.8 2.9 32 7-38 105-136 (138)
397 3fk8_A Disulphide isomerase; A 67.8 7.5 0.00026 22.3 3.8 33 6-38 91-130 (133)
398 1lu4_A Soluble secreted antige 65.1 7.6 0.00026 22.0 3.4 31 8-39 101-134 (136)
399 3eyt_A Uncharacterized protein 65.1 5.5 0.00019 23.5 2.9 34 7-40 118-151 (158)
400 2l5o_A Putative thioredoxin; s 64.6 6.1 0.00021 23.1 3.0 34 7-40 107-140 (153)
401 1zzo_A RV1677; thioredoxin fol 64.4 6.1 0.00021 22.3 2.9 32 7-39 102-133 (136)
402 3lor_A Thiol-disulfide isomera 62.3 7 0.00024 23.0 3.0 34 7-40 121-154 (160)
403 3vhs_A ATPase wrnip1; zinc fin 61.6 0.44 1.5E-05 21.0 -1.9 11 82-92 8-18 (29)
404 2f9s_A Thiol-disulfide oxidore 61.4 7 0.00024 22.9 2.8 35 7-41 104-138 (151)
405 2b5x_A YKUV protein, TRXY; thi 58.5 6.9 0.00024 22.5 2.4 32 8-39 112-143 (148)
406 3bj5_A Protein disulfide-isome 58.3 20 0.00068 21.6 4.5 46 54-100 15-61 (147)
407 2ju5_A Thioredoxin disulfide i 58.0 10 0.00036 22.6 3.2 32 7-39 117-150 (154)
408 3kh7_A Thiol:disulfide interch 56.8 8.7 0.0003 23.5 2.8 33 7-39 133-165 (176)
409 2v1m_A Glutathione peroxidase; 56.7 5 0.00017 23.9 1.6 31 8-38 134-164 (169)
410 3dwv_A Glutathione peroxidase- 56.2 13 0.00043 23.0 3.5 32 9-40 151-182 (187)
411 1sen_A Thioredoxin-like protei 55.6 14 0.00048 22.4 3.6 31 9-39 105-146 (164)
412 2lja_A Putative thiol-disulfid 55.3 12 0.0004 21.8 3.1 35 7-41 109-143 (152)
413 2obi_A PHGPX, GPX-4, phospholi 55.2 5.6 0.00019 24.4 1.7 31 8-38 151-181 (183)
414 2rli_A SCO2 protein homolog, m 52.8 12 0.0004 22.3 2.9 32 8-39 131-162 (171)
415 2p31_A CL683, glutathione pero 52.0 15 0.00051 22.5 3.3 31 9-39 149-179 (181)
416 3dmo_A Cytidine deaminase; str 51.2 7 0.00024 24.0 1.6 15 80-94 93-107 (138)
417 1a0r_P Phosducin, MEKA, PP33; 49.2 13 0.00046 24.7 2.8 32 9-40 187-225 (245)
418 3r2n_A Cytidine deaminase; str 48.2 8.3 0.00028 23.6 1.6 15 80-94 90-104 (138)
419 3mpz_A Cytidine deaminase; ssg 46.9 8.9 0.0003 23.9 1.6 14 81-94 106-119 (150)
420 2vup_A Glutathione peroxidase- 45.5 21 0.00072 21.9 3.3 31 9-39 153-183 (190)
421 1fme_A FSD-EY peptide; beta-BE 45.0 17 0.00059 15.6 1.9 20 22-41 6-27 (28)
422 1z9h_A Membrane-associated pro 45.0 25 0.00087 23.2 3.8 25 73-97 13-37 (290)
423 2d30_A Cytidine deaminase; pur 43.2 11 0.00038 23.1 1.6 15 80-94 92-106 (141)
424 3oj6_A Blasticidin-S deaminase 42.2 12 0.0004 23.6 1.6 13 81-93 110-122 (158)
425 2f8a_A Glutathione peroxidase 39.8 13 0.00044 23.7 1.6 31 8-38 174-204 (208)
426 2pd0_A Hypothetical protein; s 37.9 5.3 0.00018 26.5 -0.5 31 55-85 41-74 (223)
427 1ttz_A Conserved hypothetical 37.8 35 0.0012 18.6 3.1 28 9-40 49-76 (87)
428 1hyu_A AHPF, alkyl hydroperoxi 37.0 78 0.0027 22.9 5.6 37 62-98 9-45 (521)
429 3vln_A GSTO-1, glutathione S-t 33.4 38 0.0013 21.4 3.1 24 74-97 23-46 (241)
430 2jvx_A NF-kappa-B essential mo 32.9 2.4 8.1E-05 19.0 -2.0 16 83-98 6-21 (28)
431 2z3g_A Blasticidin-S deaminase 32.8 20 0.0007 21.4 1.6 14 80-93 85-98 (130)
432 2hyx_A Protein DIPZ; thioredox 32.6 33 0.0011 24.0 2.8 33 7-39 165-197 (352)
433 4dej_A Glutathione S-transfera 32.6 36 0.0012 21.6 2.9 26 72-97 10-35 (231)
434 2l9z_A PR domain zinc finger p 32.1 5 0.00017 19.3 -1.0 8 82-89 13-20 (39)
435 3vk8_A Probable formamidopyrim 31.7 7 0.00024 26.9 -0.7 11 80-90 279-289 (295)
436 4f03_A Glutathione transferase 31.2 31 0.001 21.8 2.3 18 79-96 18-35 (253)
437 3tfg_A ALR2278 protein; heme-b 30.2 59 0.002 20.5 3.5 29 72-100 128-156 (189)
438 1wr6_A ADP-ribosylation factor 29.7 31 0.001 20.3 1.9 16 84-99 45-60 (111)
439 2i3y_A Epididymal secretory gl 29.4 50 0.0017 21.2 3.1 32 8-39 178-209 (215)
440 2r37_A Glutathione peroxidase 29.0 52 0.0018 20.9 3.1 32 8-39 160-191 (207)
441 3u6p_A Formamidopyrimidine-DNA 27.6 8.9 0.00031 26.0 -0.8 14 26-39 141-154 (273)
442 2fr5_A Cytidine deaminase; tet 27.4 22 0.00075 21.9 1.1 13 81-93 97-109 (146)
443 2r4v_A XAP121, chloride intrac 26.7 57 0.002 20.9 3.1 19 79-97 26-44 (247)
444 1r5t_A Cytidine deaminase; zin 26.3 18 0.00063 22.0 0.5 13 81-93 94-106 (142)
445 1k82_A Formamidopyrimidine-DNA 26.1 9.8 0.00034 25.7 -0.8 13 26-38 136-148 (268)
446 2xzf_A Formamidopyrimidine-DNA 26.0 10 0.00034 25.7 -0.8 12 26-37 139-150 (271)
447 3q18_A GSTO-2, glutathione S-t 25.9 56 0.0019 20.6 2.9 24 74-97 23-46 (239)
448 2q1z_B Anti-sigma factor CHRR, 25.6 33 0.0011 21.8 1.7 17 82-98 34-50 (195)
449 3twl_A Formamidopyrimidine-DNA 25.4 13 0.00043 25.8 -0.4 13 80-92 269-281 (310)
450 1yy7_A SSPA, stringent starvat 25.2 77 0.0026 19.5 3.4 23 74-96 10-32 (213)
451 1ee8_A MUTM (FPG) protein; bet 25.0 7.2 0.00025 26.4 -1.6 13 26-38 129-141 (266)
452 1nj1_A PROR, proline-tRNA synt 24.9 30 0.001 25.4 1.6 30 52-85 429-458 (501)
453 3lyp_A Stringent starvation pr 24.7 60 0.0021 20.0 2.8 23 75-97 9-31 (215)
454 1k3x_A Endonuclease VIII; hydr 24.2 11 0.00038 25.3 -0.8 11 27-37 134-144 (262)
455 2ijr_A Hypothetical protein AP 24.2 37 0.0012 23.5 1.8 24 72-95 220-243 (300)
456 3pl5_A SMU_165, putative uncha 24.2 1.8E+02 0.0061 20.0 6.4 62 26-94 78-139 (320)
457 4iel_A Glutathione S-transfera 24.0 63 0.0022 20.2 2.9 24 74-97 23-46 (229)
458 3n5o_A Glutathione transferase 23.7 78 0.0027 19.7 3.3 24 74-97 9-32 (235)
459 3rbt_A Glutathione transferase 22.2 69 0.0024 20.4 2.8 24 74-97 26-49 (246)
460 3mjh_B Early endosome antigen 21.9 5.7 0.0002 18.5 -1.9 14 83-96 8-21 (34)
461 3gox_A Restriction endonucleas 21.6 40 0.0014 22.0 1.4 12 78-89 102-113 (200)
462 3b8f_A Putative blasticidin S 21.4 23 0.00079 21.5 0.3 14 80-93 86-99 (142)
463 3qav_A RHO-class glutathione S 21.4 70 0.0024 20.3 2.7 23 75-97 27-49 (243)
464 4glt_A Glutathione S-transfera 20.1 76 0.0026 19.9 2.6 21 77-97 25-45 (225)
No 1
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.71 E-value=3.3e-17 Score=115.67 Aligned_cols=92 Identities=22% Similarity=0.340 Sum_probs=66.5
Q ss_pred eeEEEccCCcccccCC---CccCHHHHHHHhhCCCCCCC-----CCcccc--cCCeEEcCCHHHHHHHHhcCCCcEEEEE
Q psy3441 9 YVIKHYKDGEFNKNYE---RKETVSAFVNFLKDPKGDIP-----WEEDES--AQAVVHLPTPQALNKLLKKETRPVLIMF 78 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~---g~~~~~~l~~f~~~~~~~~~-----~~~~~~--~~~~v~~~~~~~f~~~~~~~~~~vlv~F 78 (100)
+++.++..|+....|. |.++.++|.+|+++...... +...++ ....+..+++++|++++.+.+++++|+|
T Consensus 195 P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f 274 (361)
T 3uem_A 195 PAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEF 274 (361)
T ss_dssp SEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEE
T ss_pred ccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccCCCcEEEEE
Confidence 5777777755444454 78999999999987643211 111111 1223444488999999977779999999
Q ss_pred ECCCChHHhhhHHHHHHhHhhC
Q psy3441 79 YAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 79 ~a~wC~~C~~~~p~~~~la~~l 100 (100)
|||||++|+++.|.|+++|+.|
T Consensus 275 ~a~wC~~C~~~~p~~~~la~~~ 296 (361)
T 3uem_A 275 YAPWCGHCKQLAPIWDKLGETY 296 (361)
T ss_dssp ECTTCHHHHHHHHHHHHHHHHT
T ss_pred ecCcCHhHHHHHHHHHHHHHHh
Confidence 9999999999999999999864
No 2
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.66 E-value=1.7e-16 Score=105.92 Aligned_cols=85 Identities=27% Similarity=0.498 Sum_probs=67.5
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhh
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQ 88 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~ 88 (100)
||+++|++|+.. .|.|.++.+.+.+|+.+...+... + ....+..++.++|++++.+. ++++|+|||+||++|+.
T Consensus 91 Pt~~~~~~g~~~-~~~g~~~~~~l~~~i~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~-~~~~v~f~a~wC~~C~~ 164 (241)
T 3idv_A 91 PTIKILKKGQAV-DYEGSRTQEEIVAKVREVSQPDWT---P-PPEVTLVLTKENFDEVVNDA-DIILVEFYAPWCGHCKK 164 (241)
T ss_dssp SEEEEEETTEEE-ECCSCSCHHHHHHHHHHHHSTTCC---C-CCCSSEECCTTTHHHHHHHC-SEEEEEEECTTCTGGGG
T ss_pred CEEEEEcCCCcc-cccCcccHHHHHHHHhhccCcccc---c-ccccceeccHHHHHHhhccC-CeEEEEEECCCCHHHHH
Confidence 578888888765 599999999999999876543321 1 11234445789999999766 89999999999999999
Q ss_pred hHHHHHHhHhh
Q psy3441 89 LKPEFLAGRDN 99 (100)
Q Consensus 89 ~~p~~~~la~~ 99 (100)
+.|.|+++|++
T Consensus 165 ~~p~~~~~a~~ 175 (241)
T 3idv_A 165 LAPEYEKAAKE 175 (241)
T ss_dssp THHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 99999999875
No 3
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.63 E-value=5.7e-16 Score=93.23 Aligned_cols=47 Identities=30% Similarity=0.660 Sum_probs=41.2
Q ss_pred eEEcCCHHHHHHHHhcC-CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKKE-TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~-~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++++.+.++|++.+.+. +++|+|+|||+||++|+.+.|.++++++.+
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~ 49 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSM 49 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhcc
Confidence 35677889999998764 589999999999999999999999999764
No 4
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.62 E-value=5.7e-16 Score=99.68 Aligned_cols=47 Identities=19% Similarity=0.283 Sum_probs=41.5
Q ss_pred eEEcCCHHHHHHHHhc-CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
+..+.+.++|++.+.+ ++++|||+|||+|||+|+.+.|.++++|+++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~ 70 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDI 70 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHc
Confidence 4578888999988864 5689999999999999999999999999864
No 5
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.59 E-value=1.2e-15 Score=93.43 Aligned_cols=47 Identities=17% Similarity=0.383 Sum_probs=40.8
Q ss_pred CCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 52 QAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
..++.+ ++++|++.+.+.++++||+|||+||++|+++.|.|+++|+.
T Consensus 15 ~~v~~l-~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 61 (127)
T 3h79_A 15 SRVVEL-TDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMS 61 (127)
T ss_dssp CCCEEC-CTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred CceEEC-ChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHH
Confidence 345555 88999999977669999999999999999999999999864
No 6
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.58 E-value=2.4e-15 Score=109.64 Aligned_cols=92 Identities=26% Similarity=0.427 Sum_probs=63.7
Q ss_pred eeEEEccCCcccccCCCccCHH--HHHHHhhCCCCCCC-----CCccc-ccCCeEEcCCHHHHHHHHhcCCCcEEEEEEC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVS--AFVNFLKDPKGDIP-----WEEDE-SAQAVVHLPTPQALNKLLKKETRPVLIMFYA 80 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~--~l~~f~~~~~~~~~-----~~~~~-~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a 80 (100)
+++.++..+.....+.+..+.+ +|.+|+++...... +...+ .....+..+++++|++++.+.+++|||+|||
T Consensus 300 P~~~i~~~~~~ky~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a 379 (481)
T 3f8u_A 300 PVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYA 379 (481)
T ss_dssp CEEEEECSSSCEEECCSCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEEC
T ss_pred cEEEEEcCCCcccCCCcccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEec
Confidence 3444443332222355778888 99999976542111 11111 1223455568899999998877999999999
Q ss_pred CCChHHhhhHHHHHHhHhhC
Q psy3441 81 PWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 81 ~wC~~C~~~~p~~~~la~~l 100 (100)
|||++|+++.|.++++++.+
T Consensus 380 ~wC~~C~~~~p~~~~l~~~~ 399 (481)
T 3f8u_A 380 PWCGHCKNLEPKYKELGEKL 399 (481)
T ss_dssp TTBHHHHHHHHHHHHHHHHT
T ss_pred CcChhHHHhhHHHHHHHHHh
Confidence 99999999999999999764
No 7
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.58 E-value=7.9e-15 Score=112.38 Aligned_cols=80 Identities=23% Similarity=0.351 Sum_probs=66.6
Q ss_pred eeEEEccCCcc----cccCCC-ccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCC
Q psy3441 9 YVIKHYKDGEF----NKNYER-KETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWC 83 (100)
Q Consensus 9 ~ti~~~~~g~~----~~~y~g-~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC 83 (100)
||+.+|+.|.. ...|+| .++.++|.+|+.+...+ .+..+ +.++|.+.+.+.+++++|+|||+||
T Consensus 619 Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~----------~v~~l-~~~~~~~~~~~~~~~v~v~F~a~wC 687 (780)
T 3apo_A 619 PEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQ----------ASIDL-TPQTFNEKVLQGKTHWVVDFYAPWS 687 (780)
T ss_dssp SEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCC----------CSEEE-CHHHHHHHTTTCSSCEEEEEECTTC
T ss_pred CeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhccc----------ccccC-CHHHHHHHHhcCCCeEEEEEECCCC
Confidence 67888887743 466899 89999999999988531 23444 7899998777667999999999999
Q ss_pred hHHhhhHHHHHHhHhh
Q psy3441 84 GFCKQLKPEFLAGRDN 99 (100)
Q Consensus 84 ~~C~~~~p~~~~la~~ 99 (100)
++|+++.|.+++++++
T Consensus 688 ~~C~~~~p~~~~la~~ 703 (780)
T 3apo_A 688 GPSQNFAPEFELLARM 703 (780)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999875
No 8
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.56 E-value=1.3e-15 Score=101.44 Aligned_cols=83 Identities=13% Similarity=0.069 Sum_probs=63.8
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhh
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQ 88 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~ 88 (100)
||+++|++|.....|.|.++...+..|+....... .. +..++.++|+.++...+..++|+|||+||++|++
T Consensus 83 Ptl~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~--------~~-~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~ 153 (229)
T 2ywm_A 83 PTIVIEGDKDYGIRYIGLPAGLEFTTLINGIFHVS--------QR-KPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPS 153 (229)
T ss_dssp SEEEEESSSCCCEEEESCCCTTHHHHHHHHHHHHH--------TT-CCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHH
T ss_pred cEEEEECCCcccceecCCccHHHHHHHHHHHHhcc--------CC-ccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHH
Confidence 68888887777778999999999999987653210 01 2234788999988655344488999999999999
Q ss_pred hHHHHHHhHhhC
Q psy3441 89 LKPEFLAGRDNL 100 (100)
Q Consensus 89 ~~p~~~~la~~l 100 (100)
+.|.++++++++
T Consensus 154 ~~~~~~~~~~~~ 165 (229)
T 2ywm_A 154 AAVMAWDFALAN 165 (229)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHC
Confidence 999999998764
No 9
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.55 E-value=9.1e-15 Score=107.32 Aligned_cols=73 Identities=25% Similarity=0.469 Sum_probs=54.5
Q ss_pred cCHHHHHHHhhCCCCCCC-----CCcccc-cCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 27 ETVSAFVNFLKDPKGDIP-----WEEDES-AQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 27 ~~~~~l~~f~~~~~~~~~-----~~~~~~-~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.+.+.+..|+.+...... +...+. ....+..+++++|+..+.+.+++|||+||||||+||+.+.|.|++++++
T Consensus 326 ~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~ 404 (504)
T 2b5e_A 326 LESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADT 404 (504)
T ss_dssp CCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHH
Confidence 789999999876532111 111111 1233444588999999987779999999999999999999999999875
No 10
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.53 E-value=1.5e-14 Score=88.91 Aligned_cols=47 Identities=9% Similarity=0.130 Sum_probs=40.1
Q ss_pred CeEEcCCHHHHHHHHhcCCC--cEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETR--PVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++ +.++|.+.+.+.++ +|+|+|||+||++|+.|.|.++++|++|
T Consensus 4 ~v~~i-t~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~ 52 (118)
T 3evi_A 4 ELREI-SGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKF 52 (118)
T ss_dssp SCEEC-CGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHC
T ss_pred ceEEe-CHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHC
Confidence 35666 77999998866534 8999999999999999999999999875
No 11
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.52 E-value=2.5e-14 Score=99.69 Aligned_cols=50 Identities=36% Similarity=0.800 Sum_probs=43.5
Q ss_pred ccCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 50 SAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 50 ~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
....++.+ +.++|++++.+.+++|||+|||+||++|+++.|.|+++++++
T Consensus 15 ~~~~vv~l-t~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~ 64 (298)
T 3ed3_A 15 SDPHISEL-TPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRL 64 (298)
T ss_dssp SCTTCEEC-CHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred CCCCeEEe-CHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 34566666 889999999766689999999999999999999999999864
No 12
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.52 E-value=1.6e-14 Score=91.48 Aligned_cols=46 Identities=15% Similarity=0.234 Sum_probs=40.5
Q ss_pred EEcCCHHHHHHHHh-cCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 55 VHLPTPQALNKLLK-KETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 55 v~~~~~~~f~~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..+.+.++|++.+. +.+++|||+|||+||++|+.+.|.++++++++
T Consensus 6 ~~i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~ 52 (149)
T 3gix_A 6 PKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDL 52 (149)
T ss_dssp CEECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTT
T ss_pred eecCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 44568899999987 45699999999999999999999999999864
No 13
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.52 E-value=3e-14 Score=84.56 Aligned_cols=47 Identities=19% Similarity=0.357 Sum_probs=41.6
Q ss_pred eEEcCCHHHHHHHHhc-CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++.+.+.++|++.+.+ .+++++|+|||+||++|+++.|.++++++++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~ 50 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY 50 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC
Confidence 5677788999999864 5699999999999999999999999998764
No 14
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.51 E-value=3.1e-15 Score=99.25 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=60.7
Q ss_pred eeEEEccCCccc-ccCCCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcE-EEEEECCCChHH
Q psy3441 9 YVIKHYKDGEFN-KNYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPV-LIMFYAPWCGFC 86 (100)
Q Consensus 9 ~ti~~~~~g~~~-~~y~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~v-lv~F~a~wC~~C 86 (100)
||+++|++|+.. ..|.|.++...+..|+........ ... .++.++|+.+.... +++ +|.|||+||++|
T Consensus 80 Pt~~~~~~g~~~~~~~~G~~~~~~l~~~l~~~l~~~~--------~~~-~l~~~~~~~~~~~~-~~~~~v~F~a~wC~~C 149 (226)
T 1a8l_A 80 PATTITQDGKDFGVRYFGLPAGHEFAAFLEDIVDVSR--------EET-NLMDETKQAIRNID-QDVRILVFVTPTCPYC 149 (226)
T ss_dssp SEEEEEETTBCCSEEEESCCCTTHHHHHHHHHHHHHH--------TCC-CCCHHHHHHHTTCC-SCEEEEEEECSSCTTH
T ss_pred ceEEEEcCCceeeEEEeccCcHHHHHHHHHHHHhhcC--------CCC-CCCHHHHHHHHhcC-CCcEEEEEeCCCCCcc
Confidence 678888888653 668898888888888876431100 112 33778898876555 555 999999999999
Q ss_pred hhhHHHHHHhHhh
Q psy3441 87 KQLKPEFLAGRDN 99 (100)
Q Consensus 87 ~~~~p~~~~la~~ 99 (100)
+++.|.+++++++
T Consensus 150 ~~~~p~~~~l~~~ 162 (226)
T 1a8l_A 150 PLAVRMAHKFAIE 162 (226)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 15
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.50 E-value=6.2e-15 Score=89.06 Aligned_cols=46 Identities=37% Similarity=0.776 Sum_probs=39.7
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.+..+ ++++|++.+...+++++|+|||+||++|+++.|.|++++++
T Consensus 8 ~v~~l-~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~ 53 (121)
T 2djj_A 8 PVTVV-VAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGAL 53 (121)
T ss_dssp SSEEC-CTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHH
T ss_pred CeEEe-cccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHH
Confidence 44555 78999998765669999999999999999999999999875
No 16
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.50 E-value=3.8e-14 Score=85.77 Aligned_cols=46 Identities=26% Similarity=0.508 Sum_probs=40.6
Q ss_pred EEcCCHHHHHHHHhc-CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 55 VHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 55 v~~~~~~~f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
....+.++|++++.+ .+++++|+|||+||++|+++.|.++++++++
T Consensus 14 ~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~ 60 (116)
T 3qfa_C 14 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKY 60 (116)
T ss_dssp BCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTC
T ss_pred cCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
Confidence 456689999999974 4599999999999999999999999999864
No 17
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.50 E-value=7.5e-14 Score=82.85 Aligned_cols=47 Identities=23% Similarity=0.465 Sum_probs=41.1
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|++.+.+.+++++|.|||+||++|+.+.|.++++++++
T Consensus 5 ~v~~l-~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~ 51 (111)
T 3gnj_A 5 SLEKL-DTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNY 51 (111)
T ss_dssp CSEEC-CHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHT
T ss_pred cceec-CHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHc
Confidence 34555 899999999666699999999999999999999999998764
No 18
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.49 E-value=5.1e-14 Score=107.88 Aligned_cols=80 Identities=24% Similarity=0.477 Sum_probs=65.2
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcC--CCcEEEEEECCCChHH
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKE--TRPVLIMFYAPWCGFC 86 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~--~~~vlv~F~a~wC~~C 86 (100)
||+.++++|+. ..|.|.++.++|.+|+++... +.++ .+++++|++++.+. +..++|.||||||+||
T Consensus 511 Pt~~~~~~g~~-~~~~g~~~~~~l~~fi~~~~~----------~~v~-~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c 578 (780)
T 3apo_A 511 PTTVVFNQSSI-HEYEGHHSAEQILEFIEDLRN----------PSVV-SLTPSTFNELVKQRKHDEVWMVDFYSPWSHPS 578 (780)
T ss_dssp SEEEEEETTEE-EEECSCSCHHHHHHHHHHHHS----------CSEE-ECCHHHHHHHTTTCCTTCCEEEEEECTTCHHH
T ss_pred CeEEEEcCCce-eeecCcccHHHHHHHHHhhcc----------ccee-ecCcccHHHHhhccCCCCeEEEEEECCCCHHH
Confidence 45566777765 668899999999999998754 1234 44789999998763 4678999999999999
Q ss_pred hhhHHHHHHhHhhC
Q psy3441 87 KQLKPEFLAGRDNL 100 (100)
Q Consensus 87 ~~~~p~~~~la~~l 100 (100)
+++.|.|+++|+.|
T Consensus 579 ~~~~p~~~~lA~~~ 592 (780)
T 3apo_A 579 QVLMPEWKRMARTL 592 (780)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHh
Confidence 99999999999863
No 19
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=5e-14 Score=86.19 Aligned_cols=46 Identities=37% Similarity=0.820 Sum_probs=40.1
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++.+ +.++|++.+...++++||+|||+||++|+++.|.|++++++
T Consensus 8 ~v~~l-~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~ 53 (133)
T 1x5d_A 8 DVIEL-TDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASE 53 (133)
T ss_dssp SCEEC-CTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHH
T ss_pred cCEEc-CHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHH
Confidence 45555 77999998876679999999999999999999999999875
No 20
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.48 E-value=1e-13 Score=84.01 Aligned_cols=49 Identities=22% Similarity=0.468 Sum_probs=42.9
Q ss_pred CCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
+..+...+.++|++.+.+.++++||+|||+||++|+++.|.++++++++
T Consensus 12 ~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~ 60 (119)
T 1w4v_A 12 STTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQ 60 (119)
T ss_dssp CSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred ceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHh
Confidence 4556677999999988777799999999999999999999999998754
No 21
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.48 E-value=1e-13 Score=86.14 Aligned_cols=49 Identities=8% Similarity=0.096 Sum_probs=41.8
Q ss_pred cCCeEEcCCHHHHHHHHhcC--CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 51 AQAVVHLPTPQALNKLLKKE--TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 51 ~~~~v~~~~~~~f~~~~~~~--~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
...++.+ +.++|.+.+.+. +++|||+|||+||++|+.+.|.|+++++++
T Consensus 9 ~g~v~~i-~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~ 59 (135)
T 2dbc_A 9 FGELREI-SGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKF 59 (135)
T ss_dssp CCSCEEC-CHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHC
T ss_pred CCceEEc-CHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHC
Confidence 3456777 899999988753 368999999999999999999999999864
No 22
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.48 E-value=3.8e-14 Score=89.06 Aligned_cols=45 Identities=20% Similarity=0.334 Sum_probs=39.2
Q ss_pred EEcCCHHHHHHHHhc-CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 55 VHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 55 v~~~~~~~f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
..+.+.++|++.+.+ .+++|+|+|||+||++|+.+.|.+++++++
T Consensus 6 ~~i~~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~ 51 (142)
T 1qgv_A 6 PHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEK 51 (142)
T ss_dssp CBCCSHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHH
T ss_pred hccCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 345678999987765 569999999999999999999999999875
No 23
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.48 E-value=1.2e-13 Score=82.62 Aligned_cols=46 Identities=26% Similarity=0.636 Sum_probs=40.6
Q ss_pred eEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.....+.++|++.+.+. ++++|+|||+||++|+++.|.++++++++
T Consensus 8 ~~~~~~~~~f~~~~~~~-k~vlv~f~a~wC~~C~~~~p~l~~l~~~~ 53 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQD-KLVVVDFYATWCGPCKMIAPMIEKFSEQY 53 (109)
T ss_dssp CEECCSHHHHHHHTTSS-SCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCHHHHHHHHhcC-CEEEEEEECCcCHhHHHHHHHHHHHHHHC
Confidence 35566899999999764 99999999999999999999999998764
No 24
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.48 E-value=9.4e-14 Score=82.86 Aligned_cols=47 Identities=19% Similarity=0.545 Sum_probs=40.4
Q ss_pred CeEEcCCHHHHHHHHhc-CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|++.+.+ .+++++|+|||+||++|+.+.|.++++++++
T Consensus 6 ~v~~l-~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~ 53 (111)
T 2pu9_C 6 KVTEV-NKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEY 53 (111)
T ss_dssp SEEEE-CTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred ccEEe-chHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHC
Confidence 45555 67999999875 5689999999999999999999999998764
No 25
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.47 E-value=1.1e-13 Score=84.61 Aligned_cols=48 Identities=38% Similarity=0.828 Sum_probs=41.1
Q ss_pred CCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..++.+ +.++|++.+...++++||+|||+||++|+++.|.++++++++
T Consensus 17 ~~v~~l-~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~ 64 (130)
T 2dml_A 17 DDVIEL-TPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATAL 64 (130)
T ss_dssp SSSEEC-CTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHT
T ss_pred CCcEEC-CHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHh
Confidence 345555 779999987666799999999999999999999999998764
No 26
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.46 E-value=1.8e-13 Score=82.79 Aligned_cols=49 Identities=22% Similarity=0.523 Sum_probs=42.9
Q ss_pred CCeEEcCCHHHHHHHHhc---CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKK---ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
...+.+.+.++|+..+.. .+++++|+||++||++|+.+.|.|+++++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~ 63 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKF 63 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
Confidence 345777799999999876 5699999999999999999999999998764
No 27
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.46 E-value=1.2e-13 Score=82.38 Aligned_cols=46 Identities=22% Similarity=0.443 Sum_probs=38.1
Q ss_pred eEEcCCHHHHHHHHhc--CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 54 VVHLPTPQALNKLLKK--ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~--~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
++.+.+.++|++.+.+ .+++++|+|||+||++|+.+.|.+++++++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~ 49 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNE 49 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHC
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHh
Confidence 4667667999999874 458999999999999999999999999875
No 28
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.46 E-value=2.2e-13 Score=83.41 Aligned_cols=50 Identities=30% Similarity=0.529 Sum_probs=43.9
Q ss_pred cCCeEEcCCHHHHHHHHhc---CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 51 AQAVVHLPTPQALNKLLKK---ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 51 ~~~~v~~~~~~~f~~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
...++.+.+.++|++.+.. .+++++|+|||+||++|+.+.|.++++++++
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~ 67 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL 67 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
Confidence 4567888899999999875 4699999999999999999999999998764
No 29
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.45 E-value=1.1e-13 Score=85.79 Aligned_cols=48 Identities=29% Similarity=0.637 Sum_probs=41.0
Q ss_pred CCeEEcCCHHHHHHHHhc-----------CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKK-----------ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~-----------~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..++.+ +.++|+..+.+ .++++||+|||+||++|+.+.|.++++++++
T Consensus 22 ~~v~~l-~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~ 80 (141)
T 3hxs_A 22 SGTIHL-TRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEY 80 (141)
T ss_dssp -CCEEC-CHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHT
T ss_pred CCcccc-cHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHh
Confidence 345555 88999999876 4689999999999999999999999998764
No 30
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.45 E-value=1.2e-13 Score=83.54 Aligned_cols=46 Identities=37% Similarity=0.732 Sum_probs=39.1
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++.+ +.++|.+.+.+.+++++|+|||+||++|+++.|.+++++++
T Consensus 4 ~v~~l-~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~ 49 (122)
T 3aps_A 4 ASIDL-TPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARM 49 (122)
T ss_dssp CSEEC-CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred chhcC-CHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 34555 78999876666669999999999999999999999999875
No 31
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.45 E-value=6.4e-14 Score=94.40 Aligned_cols=47 Identities=19% Similarity=0.529 Sum_probs=41.3
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.+..+ +.++|++.+.+.+++++|+|||+||++|+++.|.|+++++++
T Consensus 13 ~v~~l-~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~ 59 (244)
T 3q6o_A 13 PLTLL-QADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDV 59 (244)
T ss_dssp SSEEE-CTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred CceeC-ChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHH
Confidence 34444 789999999877799999999999999999999999999864
No 32
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.45 E-value=3e-13 Score=80.43 Aligned_cols=48 Identities=29% Similarity=0.659 Sum_probs=42.1
Q ss_pred CeEEcCCHHHHHHHHhc-C--CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKK-E--TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~-~--~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+.+.++|++.+.+ . +++++|.||++||++|+.+.|.++++++++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~ 53 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDY 53 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 46778788999999875 2 599999999999999999999999998764
No 33
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.44 E-value=1.3e-13 Score=81.58 Aligned_cols=46 Identities=30% Similarity=0.657 Sum_probs=39.7
Q ss_pred eEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++.+ +.++|++.+.+.+++++|.|||+||++|+.+.|.++++++++
T Consensus 4 v~~l-~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~ 49 (108)
T 2trx_A 4 IIHL-TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY 49 (108)
T ss_dssp EEEC-CTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred ceec-chhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHh
Confidence 4544 779999887666699999999999999999999999998764
No 34
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.44 E-value=1.4e-13 Score=83.15 Aligned_cols=43 Identities=12% Similarity=0.233 Sum_probs=37.8
Q ss_pred EcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 56 HLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 56 ~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
...+.++|+..+.+. ++++|+|||+||++|+++.|.+++++++
T Consensus 15 ~~~~~~~~~~~~~~~-~~~~v~f~a~wC~~C~~~~p~l~~~~~~ 57 (118)
T 1zma_A 15 EVTTVVRAQEALDKK-ETATFFIGRKTCPYCRKFAGTLSGVVAE 57 (118)
T ss_dssp EECCHHHHHHHHHTT-CCEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHhCC-CeEEEEEECCCCccHHHHHHHHHHHHHh
Confidence 344889999988765 8999999999999999999999999864
No 35
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.44 E-value=1.5e-13 Score=81.10 Aligned_cols=45 Identities=18% Similarity=0.517 Sum_probs=39.6
Q ss_pred EEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 55 VHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 55 v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
+..++.++|++.+.+. ++++|+|||+||++|+.+.|.++++++.+
T Consensus 6 v~~l~~~~~~~~~~~~-~~~lv~f~~~~C~~C~~~~~~~~~~~~~~ 50 (109)
T 3tco_A 6 TLVLTEENFDEVIRNN-KLVLVDCWAEWCAPCHLYEPIYKKVAEKY 50 (109)
T ss_dssp CEECCTTTHHHHHHHS-SEEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred EEEecHHHHHHHHhcC-CeEEEEEECCCCHHHHhhhHHHHHHHHHh
Confidence 4445889999999775 99999999999999999999999998764
No 36
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=1e-13 Score=85.88 Aligned_cols=47 Identities=13% Similarity=0.382 Sum_probs=39.4
Q ss_pred CeEEcCCHHHHHHHHhcCC-CcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKET-RPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~-~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|++.+.+.. ++|+|+|||+||++|+.+.|.|+++++++
T Consensus 8 ~v~~l-~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~ 55 (137)
T 2dj0_A 8 YIKYF-NDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKY 55 (137)
T ss_dssp CCEEC-CTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHH
T ss_pred eEEEc-cHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHh
Confidence 34444 7899999987653 49999999999999999999999998753
No 37
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.43 E-value=2.6e-13 Score=80.12 Aligned_cols=45 Identities=24% Similarity=0.609 Sum_probs=39.5
Q ss_pred EEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 55 VHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 55 v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
+.+ +.++|++.+.+.+++++|.|||+||++|+.+.|.++++++++
T Consensus 4 ~~l-~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~ 48 (107)
T 1dby_A 4 GAV-NDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEY 48 (107)
T ss_dssp EEE-CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred Eec-cHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHh
Confidence 444 789999988776799999999999999999999999998754
No 38
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.43 E-value=1.7e-13 Score=84.67 Aligned_cols=46 Identities=35% Similarity=0.765 Sum_probs=39.9
Q ss_pred CCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 52 QAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
..++.+ +.++|++.+.+. +++||+|||+||++|+++.|.|++++++
T Consensus 17 ~~v~~l-~~~~~~~~~~~~-~~vlv~f~a~wC~~C~~~~p~~~~~~~~ 62 (140)
T 2dj1_A 17 NGVWVL-NDGNFDNFVADK-DTVLLEFYAPWCGHCKQFAPEYEKIAST 62 (140)
T ss_dssp TTEEEC-CTTTHHHHHTTC-SEEEEEECCTTCHHHHTTHHHHHHHHHH
T ss_pred CCCEEc-ChHhHHHHHhcC-CeEEEEEECCCCHHHHHhhHHHHHHHHH
Confidence 455555 889999988754 8999999999999999999999999875
No 39
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.43 E-value=2.5e-13 Score=81.76 Aligned_cols=47 Identities=30% Similarity=0.699 Sum_probs=41.1
Q ss_pred eEEcCCHHHHHHHHhc-CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++.+.+.++|++.+.+ .+++++|+|||+||++|+++.|.++++++++
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~ 62 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY 62 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc
Confidence 6677666999999875 5689999999999999999999999998764
No 40
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.43 E-value=1.6e-13 Score=91.53 Aligned_cols=47 Identities=26% Similarity=0.494 Sum_probs=40.8
Q ss_pred eEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.+..++.++|++.+.+++++++|+|||+||++|+.+.|.++++++++
T Consensus 13 ~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~ 59 (222)
T 3dxb_A 13 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY 59 (222)
T ss_dssp CCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred CceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHh
Confidence 34455889999977666799999999999999999999999999764
No 41
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.43 E-value=1.9e-13 Score=80.97 Aligned_cols=45 Identities=33% Similarity=0.708 Sum_probs=39.2
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|++.+. +++++|+|||+||++|+++.|.++++++++
T Consensus 6 ~v~~l-~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~ 50 (111)
T 3uvt_A 6 TVLAL-TENNFDDTIA--EGITFIKFYAPWCGHCKTLAPTWEELSKKE 50 (111)
T ss_dssp CSEEC-CTTTHHHHHH--SSEEEEEEECSSCHHHHHHHHHHHHHHTCC
T ss_pred cceEc-ChhhHHHHhc--CCcEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 44555 7899999998 489999999999999999999999998753
No 42
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.43 E-value=2.3e-14 Score=87.92 Aligned_cols=47 Identities=34% Similarity=0.745 Sum_probs=40.3
Q ss_pred CCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 52 QAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
..++.+ +.++|+..+.+.++++||+|||+||++|+++.|.|++++++
T Consensus 7 ~~v~~l-~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~ 53 (133)
T 2dj3_A 7 GPVKVV-VGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKK 53 (133)
T ss_dssp CSSEEC-CTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHH
T ss_pred CceEEE-cCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHH
Confidence 345555 77999998876669999999999999999999999999875
No 43
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.43 E-value=1.2e-13 Score=85.52 Aligned_cols=49 Identities=22% Similarity=0.479 Sum_probs=42.0
Q ss_pred cCCeEEcCCHHHHHHHHhcC-CCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 51 AQAVVHLPTPQALNKLLKKE-TRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 51 ~~~~v~~~~~~~f~~~~~~~-~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
...++.+.+.++|+.++.+. ++++||+|||+||++|+.+.|.|++++++
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~ 68 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNY 68 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGT
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHh
Confidence 34677887789999988764 57999999999999999999999999875
No 44
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.43 E-value=2.2e-14 Score=85.06 Aligned_cols=44 Identities=18% Similarity=0.332 Sum_probs=33.9
Q ss_pred EcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 56 HLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 56 ~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.+.+.++|++.+.+ +++++|+|||+||++|+++.|.++++++++
T Consensus 4 ~i~~~~~~~~~~~~-~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~ 47 (105)
T 4euy_A 4 TFKTIEELATYIEE-QQLVLLFIKTENCGVCDVMLRKVNYVLENY 47 (105)
T ss_dssp ------CCSSSTTC-SSEEEEEEEESSCHHHHHHHHHHHHHHHTC
T ss_pred ccCCHHHHHHHHhc-CCCEEEEEeCCCCcchHHHHHHHHHHHHHc
Confidence 45567788887754 499999999999999999999999999864
No 45
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.43 E-value=2.1e-13 Score=82.41 Aligned_cols=48 Identities=27% Similarity=0.641 Sum_probs=41.2
Q ss_pred CCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
+.+..+.+.++|++++.+. ++++|+|||+||++|+++.|.++++++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~-k~vvv~F~a~wC~~C~~~~p~l~~~~~~~ 59 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQN-DKLVIDFYATWCGPCKMMQPHLTKLIQAY 59 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHC-SEEEEEEECTTCHHHHHTHHHHHHHHHHC
T ss_pred hheeecCCHHHHHHHHhCC-CEEEEEEECCCCHHHHHHHHHHHHHHHHC
Confidence 3456677888899988765 89999999999999999999999998764
No 46
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.42 E-value=4.4e-13 Score=81.34 Aligned_cols=47 Identities=32% Similarity=0.588 Sum_probs=39.7
Q ss_pred eEEcC-CHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLP-TPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~-~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++.+. +.++|++.+.+.++++||.|||+||++|+.+.|.++++++++
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~ 52 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN 52 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
Confidence 45554 788999766655699999999999999999999999998764
No 47
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.42 E-value=4.9e-13 Score=79.51 Aligned_cols=49 Identities=22% Similarity=0.469 Sum_probs=43.2
Q ss_pred CCeEEcCCHHHHHHHHhc---CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKK---ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..++.+.+.++|++.+.. .+++++|.||++||++|+.+.|.++++++++
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~ 55 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKF 55 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHC
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhC
Confidence 457888899999999875 4689999999999999999999999998764
No 48
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.42 E-value=8.7e-14 Score=95.32 Aligned_cols=46 Identities=26% Similarity=0.485 Sum_probs=39.7
Q ss_pred CeEEcCCHHHHHHHHhc-CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 53 AVVHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++.+ +.++|++++.. .+++|+|+||||||++|+.+.|.|++++++
T Consensus 8 ~v~~~-~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~ 54 (287)
T 3qou_A 8 NIVNI-NESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQ 54 (287)
T ss_dssp TEEEC-CTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHH
T ss_pred ccEEC-CHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHH
Confidence 45555 77999998865 369999999999999999999999999875
No 49
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.42 E-value=3.8e-13 Score=81.62 Aligned_cols=47 Identities=21% Similarity=0.625 Sum_probs=40.1
Q ss_pred CeEEcCCHHHHHHHHhc-CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|++.+.+ .+++++|+|||+||++|+++.|.++++++++
T Consensus 19 ~v~~l-~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~ 66 (124)
T 1faa_A 19 KVTEV-NKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEY 66 (124)
T ss_dssp SEEEE-CTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred ceEEe-cchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHC
Confidence 45555 67899998875 5689999999999999999999999998764
No 50
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.42 E-value=4.4e-13 Score=78.75 Aligned_cols=46 Identities=28% Similarity=0.590 Sum_probs=40.5
Q ss_pred EEcCCHHHHHHHHhc-CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 55 VHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 55 v~~~~~~~f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..+.+.++|++.+.+ .+++++|.|||+||++|+++.|.++++++++
T Consensus 3 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~ 49 (105)
T 3m9j_A 3 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY 49 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHS
T ss_pred EEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHc
Confidence 457788999999874 3599999999999999999999999998764
No 51
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.42 E-value=5.3e-13 Score=82.60 Aligned_cols=48 Identities=29% Similarity=0.596 Sum_probs=40.5
Q ss_pred CCeEEcCCHHHHHHHHhc-----------CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKK-----------ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~-----------~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..++.+ +.++|.+.+.+ .+++++|+|||+||++|+++.|.++++++++
T Consensus 9 ~~v~~l-~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~ 67 (136)
T 2l5l_A 9 GKVIHL-TKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEY 67 (136)
T ss_dssp TSEEEE-CHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHT
T ss_pred CceEEe-cchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHh
Confidence 345555 78999998864 4589999999999999999999999998764
No 52
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.41 E-value=4.3e-13 Score=82.44 Aligned_cols=46 Identities=22% Similarity=0.434 Sum_probs=39.9
Q ss_pred eEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++.+.+.++|++.+. .++++||+|||+||++|+++.|.|+++++++
T Consensus 21 v~~l~~~~~f~~~~~-~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~ 66 (125)
T 1r26_A 21 VVDVYSVEQFRNIMS-EDILTVAWFTAVWCGPCKTIERPMEKIAYEF 66 (125)
T ss_dssp CEEECCHHHHHHHHH-SSSCEEEEEECTTCHHHHHTHHHHHHHHHHC
T ss_pred eEECCCHHHHHHHHc-cCCEEEEEEECCcCHhHHHHHHHHHHHHHHC
Confidence 566656699999984 4599999999999999999999999998764
No 53
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.41 E-value=6.5e-13 Score=82.12 Aligned_cols=50 Identities=26% Similarity=0.498 Sum_probs=42.7
Q ss_pred cCCeEEcCCHHHHHHHHhc---CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 51 AQAVVHLPTPQALNKLLKK---ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 51 ~~~~v~~~~~~~f~~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
...++.+.+.++|++.+.. .+++++|+|||+||++|+.+.|.++++++++
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~ 75 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENY 75 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
Confidence 3457888789999998852 3589999999999999999999999998764
No 54
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.41 E-value=5.7e-13 Score=78.26 Aligned_cols=47 Identities=28% Similarity=0.634 Sum_probs=40.4
Q ss_pred eEEcCCHHHHHHHHhc-CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++.+.+.++|++.+.+ .+++++|.||++||++|+++.|.++++++++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~ 49 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQF 49 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHh
Confidence 3566666999999875 5689999999999999999999999998764
No 55
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.41 E-value=5.7e-13 Score=79.76 Aligned_cols=49 Identities=29% Similarity=0.564 Sum_probs=43.0
Q ss_pred CCeEEcCCHHHHHHHHhc---CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKK---ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..++.+.+.++|++.+.. .+++++|.||++||++|+.+.|.++++++++
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~ 57 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKF 57 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHC
Confidence 457888889999999875 3589999999999999999999999998764
No 56
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.41 E-value=4.7e-13 Score=82.92 Aligned_cols=44 Identities=18% Similarity=0.542 Sum_probs=38.5
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|++.+.+ +++|+|||+||++|+.+.|.++++++++
T Consensus 17 ~v~~l-~~~~~~~~~~~---~vlv~F~a~wC~~C~~~~p~l~~l~~~~ 60 (135)
T 3emx_A 17 RLIYI-TPEEFRQLLQG---DAILAVYSKTCPHCHRDWPQLIQASKEV 60 (135)
T ss_dssp EEEEC-CHHHHHHHHTS---SEEEEEEETTCHHHHHHHHHHHHHHTTC
T ss_pred ceeec-CHHHHHHHhCC---cEEEEEECCcCHhhhHhChhHHHHHHHC
Confidence 34555 88999999865 9999999999999999999999999864
No 57
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.41 E-value=2.8e-13 Score=80.69 Aligned_cols=46 Identities=33% Similarity=0.726 Sum_probs=39.3
Q ss_pred eEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++.+ +.++|.+.+.+.+++++|.|||+||++|+.+.|.++++++++
T Consensus 7 v~~l-~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~ 52 (112)
T 1t00_A 7 LKHV-TDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEY 52 (112)
T ss_dssp CEEE-CTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred EEec-chhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHh
Confidence 3444 678998887666799999999999999999999999998764
No 58
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.41 E-value=5.5e-13 Score=84.20 Aligned_cols=49 Identities=22% Similarity=0.472 Sum_probs=42.9
Q ss_pred CCeEEcCCHHHHHHHHhcC-CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKKE-TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~-~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..++.+.+.++|++++.+. ++++||+|||+||++|+++.|.|+++++++
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~ 61 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKEL 61 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHc
Confidence 4567787789999999773 599999999999999999999999998764
No 59
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.40 E-value=7.6e-13 Score=77.48 Aligned_cols=46 Identities=30% Similarity=0.687 Sum_probs=39.9
Q ss_pred EEcCCHHHHHHHHhc-CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 55 VHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 55 v~~~~~~~f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..+.+.++|++.+.+ .+++++|.||++||++|+.+.|.++++++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~ 48 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEI 48 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHC
Confidence 456677999999975 5689999999999999999999999998764
No 60
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.40 E-value=7e-13 Score=80.57 Aligned_cols=50 Identities=26% Similarity=0.516 Sum_probs=43.4
Q ss_pred ccCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 50 SAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 50 ~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.......+.+.++|++.+. .+++++|.|||+||++|+.+.|.++++++++
T Consensus 13 ~~~~~~~i~~~~~f~~~l~-~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~ 62 (121)
T 2j23_A 13 PRGSVQVISSYDQFKQVTG-GDKVVVIDFWATWCGPCKMIGPVFEKISDTP 62 (121)
T ss_dssp CCCCEEECCSHHHHHHHHS-SSSCEEEEEECTTCSTHHHHHHHHHHHHTST
T ss_pred CCcceEEcCCHHHHHHHHc-CCCEEEEEEECCCCHhHHHHHHHHHHHHHHC
Confidence 3456788889999999994 4589999999999999999999999998764
No 61
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.40 E-value=3.1e-13 Score=84.11 Aligned_cols=46 Identities=24% Similarity=0.686 Sum_probs=39.6
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++.+ +.++|.+.+.+.++++||+|||+||++|+++.|.+++++++
T Consensus 7 ~v~~l-~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~ 52 (140)
T 3hz4_A 7 SIIEF-EDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKE 52 (140)
T ss_dssp TEEEE-CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred ceEEc-chHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHH
Confidence 34444 88999977666679999999999999999999999999875
No 62
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.40 E-value=4.2e-13 Score=78.96 Aligned_cols=44 Identities=27% Similarity=0.640 Sum_probs=37.2
Q ss_pred EEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 55 VHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 55 v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
+.+ +.++|+.++.+ +++++|.||++||++|+.+.|.++++++++
T Consensus 3 ~~l-~~~~~~~~~~~-~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~ 46 (105)
T 1nsw_A 3 MTL-TDANFQQAIQG-DGPVLVDFWAAWCGPCRMMAPVLEEFAEAH 46 (105)
T ss_dssp EEE-CTTTHHHHHSS-SSCEEEEEECTTCHHHHHHHHHHHHHHHHS
T ss_pred eec-cHHhHHHHHhC-CCcEEEEEECCCCHHHHHHHHHHHHHHHHh
Confidence 445 67889966654 489999999999999999999999998764
No 63
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.40 E-value=6.7e-13 Score=79.39 Aligned_cols=46 Identities=22% Similarity=0.618 Sum_probs=40.2
Q ss_pred eEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
....++.++|++.+... ++++|.|||+||++|+.+.|.++++++++
T Consensus 10 ~~~~~~~~~f~~~~~~~-k~vlv~f~a~~C~~C~~~~~~l~~l~~~~ 55 (112)
T 1syr_A 10 VKIVTSQAEFDSIISQN-ELVIVDFFAEWCGPCKRIAPFYEECSKTY 55 (112)
T ss_dssp CEEECSHHHHHHHHHHC-SEEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred EEEECCHHHHHHHHccC-CeEEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 35566899999999754 99999999999999999999999998764
No 64
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.40 E-value=6e-13 Score=79.24 Aligned_cols=47 Identities=28% Similarity=0.670 Sum_probs=40.6
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|++.+.+.+++++|.||++||++|+.+.|.++++++++
T Consensus 8 ~v~~l-~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~ 54 (115)
T 1thx_A 8 GVITI-TDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTY 54 (115)
T ss_dssp SEEEC-CGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHT
T ss_pred ceEEe-eccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHh
Confidence 35555 789999887666699999999999999999999999998764
No 65
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.40 E-value=3.8e-13 Score=78.94 Aligned_cols=43 Identities=26% Similarity=0.618 Sum_probs=38.4
Q ss_pred CCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 58 PTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 58 ~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.+.++|++.+..++++++|.||++||++|+.+.|.++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~ 47 (105)
T 1fb6_A 5 VNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEY 47 (105)
T ss_dssp CCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred chhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHh
Confidence 4778999988766799999999999999999999999998764
No 66
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.39 E-value=6.1e-13 Score=90.83 Aligned_cols=49 Identities=12% Similarity=0.222 Sum_probs=42.7
Q ss_pred CCeEEcCCHHHHHHHHhc--CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKK--ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~--~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..++.+.+.++|.+.+.. .+++|||+|||+||++|+.+.|.|.+||++|
T Consensus 112 G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~ 162 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEY 162 (245)
T ss_dssp CSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHC
T ss_pred CeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHC
Confidence 456777689999999965 3689999999999999999999999999865
No 67
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.39 E-value=4.6e-13 Score=78.67 Aligned_cols=45 Identities=27% Similarity=0.473 Sum_probs=39.1
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|++.+ .+++++|+|||+||++|+.+.|.++++++++
T Consensus 4 ~v~~l-~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~ 48 (106)
T 3die_A 4 AIVKV-TDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADY 48 (106)
T ss_dssp CCEEC-CTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHT
T ss_pred ceEEC-CHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHh
Confidence 34555 789999999 4599999999999999999999999998764
No 68
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.39 E-value=3.9e-13 Score=89.50 Aligned_cols=47 Identities=34% Similarity=0.774 Sum_probs=40.4
Q ss_pred cCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 51 AQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 51 ~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
...++.+ ++++|++.+.+. ++++|+|||+||++|+++.|.|++++++
T Consensus 14 ~~~v~~l-~~~~~~~~~~~~-~~v~v~F~a~wC~~C~~~~p~~~~~~~~ 60 (241)
T 3idv_A 14 ENGVLVL-NDANFDNFVADK-DTVLLEFYAPWCGHCKQFAPEYEKIANI 60 (241)
T ss_dssp ETTEEEE-CTTTHHHHHTTC-SEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEe-cccCHHHHHhcC-CeEEEEEECCCCHHHHHhhHHHHHHHHH
Confidence 3455555 789999998765 8999999999999999999999999875
No 69
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.39 E-value=3.8e-13 Score=79.15 Aligned_cols=45 Identities=24% Similarity=0.543 Sum_probs=39.1
Q ss_pred eEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
++.+ +.++|++.+...+++++|.||++||++|+.+.|.+++++++
T Consensus 4 v~~l-~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~ 48 (107)
T 2i4a_A 4 TLAV-SDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKE 48 (107)
T ss_dssp EEEC-CTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred eeec-chhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHH
Confidence 4444 78999988766669999999999999999999999999875
No 70
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.39 E-value=4.1e-13 Score=82.66 Aligned_cols=47 Identities=28% Similarity=0.563 Sum_probs=40.4
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|++.+.+.+++++|+|||+||++|+.+.|.++++++++
T Consensus 23 ~v~~l-~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~ 69 (128)
T 2o8v_B 23 KIIHL-TDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEY 69 (128)
T ss_dssp CSEEE-CTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHT
T ss_pred ccEec-ChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHh
Confidence 35555 779999877666699999999999999999999999998764
No 71
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.38 E-value=1.6e-13 Score=93.08 Aligned_cols=79 Identities=8% Similarity=-0.038 Sum_probs=55.7
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhh
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQ 88 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~ 88 (100)
||+.+| +| ...|.|.++...+..|+........ ... .++.++++.+....++.+++.||||||++|++
T Consensus 88 Pt~~i~-~g--~~~~~G~~~~~~l~~fv~~~l~~~~--------~~~-~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~ 155 (243)
T 2hls_A 88 PTVAFL-GG--EVRWTGIPAGEEIRALVEVIMRLSE--------DES-GLEDATKEALKSLKGRVHIETIITPSCPYCPY 155 (243)
T ss_dssp SEEEET-TT--TEEEESCCCTTHHHHHHHHHHHHHT--------TCC-CCCHHHHHHHHHCCSCEEEEEEECSSCSSHHH
T ss_pred CEEEEE-CC--ceeEcCCCcHHHHHHHHHHHHhccC--------CCC-CCCHHHHHHHHHcCCCcEEEEEECCCCCCcHH
Confidence 677778 55 5668888887888888765421000 001 12556677665444577899999999999999
Q ss_pred hHHHHHHhHhh
Q psy3441 89 LKPEFLAGRDN 99 (100)
Q Consensus 89 ~~p~~~~la~~ 99 (100)
+.|.++++|.+
T Consensus 156 ~~p~l~~la~~ 166 (243)
T 2hls_A 156 AVLLAHMFAYE 166 (243)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999864
No 72
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.38 E-value=3.3e-13 Score=85.03 Aligned_cols=45 Identities=7% Similarity=0.089 Sum_probs=39.6
Q ss_pred EEcCCHHHHHHHHhcCCCcEEEEEECCCC--hHHhhhHHHHHHhHhhC
Q psy3441 55 VHLPTPQALNKLLKKETRPVLIMFYAPWC--GFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 55 v~~~~~~~f~~~~~~~~~~vlv~F~a~wC--~~C~~~~p~~~~la~~l 100 (100)
..+ +.++|++.+.+++.++||+|||+|| |+|+.+.|++++++++|
T Consensus 18 ~~v-t~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~ 64 (137)
T 2qsi_A 18 TLV-DEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAF 64 (137)
T ss_dssp EEE-CTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTS
T ss_pred ccc-CHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHc
Confidence 344 6799999998775699999999999 99999999999999875
No 73
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.38 E-value=2.2e-13 Score=97.27 Aligned_cols=45 Identities=27% Similarity=0.629 Sum_probs=38.2
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++. ++.++|++++.+. ++|||+||||||+||+++.|.|+++|+.
T Consensus 6 ~v~~-l~~~~f~~~~~~~-~~vlV~F~a~wC~~C~~~~p~~~~~a~~ 50 (382)
T 2r2j_A 6 EITS-LDTENIDEILNNA-DVALVNFYADWCRFSQMLHPIFEEASDV 50 (382)
T ss_dssp --CB-CCTTTHHHHHHHC-SEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred ceEE-CCHHHHHHHHhcC-CeEEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 3444 4789999988765 8999999999999999999999999875
No 74
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.38 E-value=3.5e-13 Score=80.60 Aligned_cols=46 Identities=37% Similarity=0.811 Sum_probs=39.6
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|++.+.+. ++++|.|||+||++|+++.|.++++++++
T Consensus 8 ~v~~l-~~~~~~~~~~~~-~~~lv~f~~~~C~~C~~~~~~~~~~~~~~ 53 (120)
T 1mek_A 8 HVLVL-RKSNFAEALAAH-KYLLVEFYAPWCGHCKALAPEYAKAAGKL 53 (120)
T ss_dssp TEEEC-CTTTHHHHHHHC-SEEEEEEECSSCSTTSTTHHHHHHHHHTT
T ss_pred CcEEe-chhhHHHHHccC-CeEEEEEECCCCHHHHHhhHHHHHHHHHH
Confidence 44555 789999988765 89999999999999999999999998753
No 75
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.37 E-value=7.8e-13 Score=79.58 Aligned_cols=47 Identities=28% Similarity=0.585 Sum_probs=40.1
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|.+.+...+++++|.||++||++|+.+.|.++++++++
T Consensus 13 ~v~~l-~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~ 59 (121)
T 2i1u_A 13 ATIKV-TDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATER 59 (121)
T ss_dssp CSEEC-CTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred cceec-CHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHh
Confidence 45555 678999877666699999999999999999999999998764
No 76
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.37 E-value=4.7e-13 Score=80.18 Aligned_cols=43 Identities=30% Similarity=0.521 Sum_probs=37.4
Q ss_pred eEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
++.+ +.++|++.+ .+++++|+|||+||++|+.+.|.+++++++
T Consensus 3 v~~l-~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~ 45 (112)
T 2voc_A 3 IVKA-TDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQE 45 (112)
T ss_dssp CEEC-CTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHH
T ss_pred eEEe-cHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 3444 678999988 559999999999999999999999999875
No 77
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.37 E-value=1e-12 Score=83.53 Aligned_cols=46 Identities=37% Similarity=0.871 Sum_probs=39.5
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|++.+ ..++++||+|||+||++|+.+.|.|+++++++
T Consensus 48 ~~~~l-~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~ 93 (155)
T 2ppt_A 48 KVAGI-DPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATL 93 (155)
T ss_dssp SEEEC-CHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCccC-CHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 34555 789999998 55599999999999999999999999998753
No 78
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.36 E-value=1.2e-12 Score=87.70 Aligned_cols=49 Identities=16% Similarity=0.213 Sum_probs=42.8
Q ss_pred CCeEEcCCHHHHHHHHhcC--CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKKE--TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~--~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..++.+.+.++|.+++.+. +++|||.|||+||++|+.+.|.|.++|++|
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~ 149 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEY 149 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTC
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHC
Confidence 4567776899999999765 389999999999999999999999999864
No 79
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=7.1e-13 Score=80.70 Aligned_cols=44 Identities=34% Similarity=0.657 Sum_probs=36.8
Q ss_pred CCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 52 QAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
..++.+ +.++|++++.. .+||+|||+||++|+++.|.+++++++
T Consensus 7 ~~v~~l-~~~~f~~~~~~---~vlv~f~a~wC~~C~~~~p~~~~~~~~ 50 (126)
T 1x5e_A 7 GNVRVI-TDENWRELLEG---DWMIEFYAPWCPACQNLQPEWESFAEW 50 (126)
T ss_dssp CSEEEC-CTTTHHHHTSS---EEEEEEECSSCHHHHHHHHHHHHHHHH
T ss_pred CccEEe-cHHHHHHHhCC---CEEEEEECCCCHHHHHHhHHHHHHHHH
Confidence 345555 78999987743 399999999999999999999999874
No 80
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.36 E-value=1.1e-12 Score=77.08 Aligned_cols=45 Identities=24% Similarity=0.536 Sum_probs=38.2
Q ss_pred eEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++.+ +.++|++++... ++++|.||++||++|+.+.|.++++++++
T Consensus 3 v~~l-~~~~~~~~~~~~-~~~lv~f~~~~C~~C~~~~~~l~~~~~~~ 47 (109)
T 2yzu_A 3 PIEV-TDQNFDETLGQH-PLVLVDFWAEWCAPCRMIAPILEEIAKEY 47 (109)
T ss_dssp CEEC-CTTTHHHHHHHC-SEEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred ceEc-cHhHHHHHhcCC-CeEEEEEECCCCHHHHHhhHHHHHHHHHh
Confidence 3444 779999777654 89999999999999999999999998764
No 81
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.36 E-value=1e-12 Score=82.20 Aligned_cols=46 Identities=37% Similarity=0.840 Sum_probs=39.5
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|++.+ ..++++||+|||+||++|+++.|.|+++++++
T Consensus 39 ~v~~l-~~~~~~~~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~ 84 (148)
T 3p2a_A 39 EVINA-TAETLDKLL-QDDLPMVIDFWAPWCGPCRSFAPIFAETAAER 84 (148)
T ss_dssp CCEEC-CTTTHHHHT-TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHT
T ss_pred Cceec-CHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 34444 789999999 44599999999999999999999999998764
No 82
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.35 E-value=7.9e-13 Score=86.54 Aligned_cols=48 Identities=15% Similarity=0.243 Sum_probs=40.1
Q ss_pred CCeEEcCCHHHHHHHHhcC-CCcEEEEEEC-------CCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKKE-TRPVLIMFYA-------PWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~-~~~vlv~F~a-------~wC~~C~~~~p~~~~la~~l 100 (100)
..++.+ +.++|++++..+ +.+|||+||| +||++|+.|.|.|+++|+++
T Consensus 18 ~~vi~l-t~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~ 73 (178)
T 3ga4_A 18 TGVITV-TADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVI 73 (178)
T ss_dssp TSEEEC-CTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEC-CHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHh
Confidence 356766 779999988643 4689999999 49999999999999999863
No 83
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.35 E-value=1.2e-12 Score=76.23 Aligned_cols=42 Identities=19% Similarity=0.469 Sum_probs=37.2
Q ss_pred CCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 58 PTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 58 ~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++.++|++.+.+. ++++|.||++||++|+.+.|.++++++++
T Consensus 4 l~~~~~~~~~~~~-~~~~v~f~~~~C~~C~~~~~~~~~~~~~~ 45 (104)
T 2e0q_A 4 LDSKNFDSFLASH-EIAVVDFWAEWCAPCLILAPIIEELAEDY 45 (104)
T ss_dssp CCTTTHHHHHHHS-SEEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHhcC-CcEEEEEECCCChhHHHHhHHHHHHHHHc
Confidence 3678999999654 89999999999999999999999998764
No 84
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.34 E-value=1.3e-12 Score=95.91 Aligned_cols=47 Identities=38% Similarity=0.898 Sum_probs=40.7
Q ss_pred CCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..++.+ +.++|++++.+ +++|||+||||||+||+++.|.|+++|+.|
T Consensus 14 ~~v~~l-~~~~f~~~~~~-~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~ 60 (504)
T 2b5e_A 14 SAVVKL-ATDSFNEYIQS-HDLVLAEFFAPWCGHCKNMAPEYVKAAETL 60 (504)
T ss_dssp SSCEEC-CTTTHHHHHTT-CSEEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred CCcEEC-CHHHHHHHHhc-CCeEEEEEECCCCHHHHHhHHHHHHHHHHh
Confidence 455655 78999998865 489999999999999999999999999864
No 85
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.33 E-value=7e-13 Score=79.34 Aligned_cols=44 Identities=11% Similarity=0.227 Sum_probs=36.7
Q ss_pred EEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 55 VHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 55 v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
+.+.+.++| +.+.+. ++++|.|||+||++|+.+.|.++++++.+
T Consensus 5 ~~~~~~~~f-~~~~~~-~~~vv~f~a~wC~~C~~~~~~l~~~~~~~ 48 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGL-SDAIVFFHKNLCPHCKNMEKVLDKFGARA 48 (110)
T ss_dssp SBCGGGCSH-HHHTTC-SEEEEEEECSSCSTHHHHHHHHHHHHTTC
T ss_pred eecCCHHHH-HHHHcC-CCEEEEEECCCCHhHHHHHHHHHHHHHHC
Confidence 445577889 555544 89999999999999999999999998753
No 86
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.33 E-value=3.2e-12 Score=77.96 Aligned_cols=47 Identities=17% Similarity=0.475 Sum_probs=41.7
Q ss_pred eEEcCCHHHHHHHHhc-CCCcEEEEEECC-------CChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKK-ETRPVLIMFYAP-------WCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~-~~~~vlv~F~a~-------wC~~C~~~~p~~~~la~~l 100 (100)
.+.+.+.++|++.+.+ .+++++|+|||+ ||++|+.+.|.++++++++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~ 60 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHI 60 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGC
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHc
Confidence 4667789999999887 569999999999 9999999999999998764
No 87
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.32 E-value=1.9e-12 Score=81.81 Aligned_cols=43 Identities=5% Similarity=-0.089 Sum_probs=38.3
Q ss_pred cCCHHHHHHHHhcCCCcEEEEEECCC--ChHHhhhHHHHHHhHhhC
Q psy3441 57 LPTPQALNKLLKKETRPVLIMFYAPW--CGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 57 ~~~~~~f~~~~~~~~~~vlv~F~a~w--C~~C~~~~p~~~~la~~l 100 (100)
.++.++|++.+. ++.+|||+|||+| ||+|+.+.|.++++|++|
T Consensus 21 ~~t~~~F~~~v~-~~~~vlVdF~a~~crCgpCk~iaPvleela~e~ 65 (140)
T 2qgv_A 21 PVSESRLDDWLT-QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEF 65 (140)
T ss_dssp ECCHHHHHHHHH-TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHh-CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHc
Confidence 347899999996 4489999999999 999999999999999875
No 88
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.31 E-value=4.4e-12 Score=83.72 Aligned_cols=46 Identities=17% Similarity=0.490 Sum_probs=39.7
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ ++++|+..+... +++||+|||+||++|+.+.|.|+++++++
T Consensus 98 ~v~~l-~~~~f~~~~~~~-~~vlv~F~a~wC~~C~~~~p~~~~l~~~~ 143 (210)
T 3apq_A 98 EIITL-ERREFDAAVNSG-ELWFVNFYSPGCSHCHDLAPTWREFAKEV 143 (210)
T ss_dssp TSEEC-CHHHHHHHHHHS-CCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred ceEEe-cHHHHHHHHccC-CcEEEEEeCCCChhHHHHHHHHHHHHHHh
Confidence 34544 889999999554 99999999999999999999999998764
No 89
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.31 E-value=2.7e-12 Score=83.00 Aligned_cols=42 Identities=17% Similarity=0.206 Sum_probs=33.6
Q ss_pred CHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 59 TPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 59 ~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
+.+.+..+....+++++|+|||+|||+|+.+.|.++++++++
T Consensus 42 ~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~ 83 (167)
T 1z6n_A 42 PSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQ 83 (167)
T ss_dssp CHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHC
Confidence 455555544335689999999999999999999999998753
No 90
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.30 E-value=5e-12 Score=89.07 Aligned_cols=81 Identities=17% Similarity=0.204 Sum_probs=65.4
Q ss_pred eeEEEccC-CcccccCCCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHh
Q psy3441 9 YVIKHYKD-GEFNKNYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCK 87 (100)
Q Consensus 9 ~ti~~~~~-g~~~~~y~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~ 87 (100)
+++.+|+. ......|+|.++.++|.+|++....+ . +...+.+++..+..+..+.++|.||++||++|+
T Consensus 83 ~~i~lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p----------~-v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~ 151 (361)
T 3uem_A 83 DGVVLFKKFDEGRNNFEGEVTKENLLDFIKHNQLP----------L-VIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYD 151 (361)
T ss_dssp SEEEEEESSTTSEEECCSCCCHHHHHHHHHHHSSC----------S-EEECSTTTHHHHHSCSCCEEEEEECCSSSSSHH
T ss_pred CeEEEEEecCCCccccCCcCCHHHHHHHHHHcCCC----------c-ceecCcccHHHHhcCCCCcEEEEEEeCCchhHH
Confidence 46777765 22345689999999999999988542 2 444578999998877667889999999999999
Q ss_pred hhHHHHHHhHhhC
Q psy3441 88 QLKPEFLAGRDNL 100 (100)
Q Consensus 88 ~~~p~~~~la~~l 100 (100)
++.|.|+++|++|
T Consensus 152 ~~~~~~~~~A~~~ 164 (361)
T 3uem_A 152 GKLSNFKTAAESF 164 (361)
T ss_dssp HHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHc
Confidence 9999999999864
No 91
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.30 E-value=6.2e-12 Score=76.66 Aligned_cols=45 Identities=9% Similarity=0.185 Sum_probs=40.2
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
....+.+.++|++++.+ +++++|+|+|+|||+|+.+.|.|+++++
T Consensus 7 ~~~~i~s~e~f~~ii~~-~~~vvi~khatwCgpc~~~~~~~e~~~~ 51 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEE-NKYVFVLKHSETCPISANAYDQFNKFLY 51 (112)
T ss_dssp CEEECCSHHHHHHHHHH-CSEEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred ceeecCCHHHHHHHHhc-CCCEEEEEECCcCHhHHHHHHHHHHHhc
Confidence 34677789999999987 4999999999999999999999999875
No 92
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.29 E-value=2.8e-12 Score=95.40 Aligned_cols=47 Identities=15% Similarity=0.437 Sum_probs=40.9
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|+..+.+++++|+|+|||+||++|+++.|.|+++++++
T Consensus 13 ~V~~L-t~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~ 59 (519)
T 3t58_A 13 PLTLL-DADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDV 59 (519)
T ss_dssp SSEEE-CTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHH
T ss_pred CcEEC-ChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHh
Confidence 34444 789999998777799999999999999999999999998763
No 93
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.28 E-value=6.3e-12 Score=77.62 Aligned_cols=48 Identities=27% Similarity=0.545 Sum_probs=39.8
Q ss_pred CeEEcCCHHHHHHHHhc-CCCcEEEEEECCCChHHhhhHHHH---HHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEF---LAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~---~~la~~l 100 (100)
....+.+.++|+..+.+ .++++||+|||+||++|+++.|.+ .++++.+
T Consensus 12 ~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~ 63 (134)
T 2fwh_A 12 NFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKAL 63 (134)
T ss_dssp CCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHT
T ss_pred CcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHh
Confidence 34557788999988865 368999999999999999999998 8887653
No 94
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.26 E-value=4.8e-12 Score=92.20 Aligned_cols=46 Identities=35% Similarity=0.749 Sum_probs=39.4
Q ss_pred eEEcCCHHHHHHHHhcC--CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKKE--TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~--~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++.+ +.++|++.+.+. +++|||+||||||++|+++.|.|+++|+.|
T Consensus 3 v~~l-~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~ 50 (481)
T 3f8u_A 3 VLEL-TDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRL 50 (481)
T ss_dssp CEEE-CTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred eEEe-cHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHh
Confidence 4555 789999999543 289999999999999999999999999865
No 95
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.26 E-value=1.6e-12 Score=78.19 Aligned_cols=29 Identities=31% Similarity=0.472 Sum_probs=26.6
Q ss_pred CcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++++|+|||+||++|+++.|.|++++++|
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~ 41 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQV 41 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhC
Confidence 67899999999999999999999998764
No 96
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.25 E-value=2.1e-12 Score=78.56 Aligned_cols=49 Identities=24% Similarity=0.537 Sum_probs=42.0
Q ss_pred CCeEEcCCHHHHHHHHhc---CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKK---ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..++.+.+.++|++.+.. .+++++|.||++||++|+.+.|.++++++++
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~ 65 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKF 65 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHC
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHC
Confidence 356667678999998875 4689999999999999999999999998764
No 97
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.22 E-value=8.2e-12 Score=77.35 Aligned_cols=46 Identities=24% Similarity=0.514 Sum_probs=28.1
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|+..+.+.++ ++|+||++||++|+.+.|.++++++++
T Consensus 34 ~v~~l-~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~ 79 (140)
T 1v98_A 34 WVVEA-DEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDH 79 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred ccccC-CHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 34444 78999998877656 999999999999999999999998764
No 98
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.22 E-value=8e-12 Score=88.12 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=38.5
Q ss_pred CCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHH-------HHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPE-------FLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~-------~~~la~~l 100 (100)
+.++.+ +.++|++.+.+. ++|||+||||||+ |++++|. |+++|+.|
T Consensus 11 ~~v~~l-~~~~f~~~i~~~-~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~ 63 (350)
T 1sji_A 11 DRVVSL-TEKNFKQVLKKY-DVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVL 63 (350)
T ss_dssp CCCEEE-CHHHHHHHHTTC-SEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHG
T ss_pred CccEEC-CHHHHHHHHhhC-CeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHH
Confidence 345655 889999998764 8999999999999 9999998 89888753
No 99
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.21 E-value=3.1e-12 Score=78.28 Aligned_cols=46 Identities=30% Similarity=0.657 Sum_probs=37.1
Q ss_pred eEEcCCHHHHHHHHhcCCCcEEEEEECCCCh--------------HHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCG--------------FCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~--------------~C~~~~p~~~~la~~l 100 (100)
++.+ +.++|++.+.+.+++++|+|||+||+ +|+++.|.++++++++
T Consensus 5 v~~l-~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~ 64 (123)
T 1oaz_A 5 IIHL-TDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEY 64 (123)
T ss_dssp CEEC-CSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC----
T ss_pred cEec-ChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHh
Confidence 4555 77999987766679999999999999 9999999999988753
No 100
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.19 E-value=8.4e-12 Score=91.96 Aligned_cols=48 Identities=23% Similarity=0.512 Sum_probs=40.5
Q ss_pred CCeEEcCCHHHHHHHHhc-CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
..++.+ +.++|++++.. .+++|||+|||+||++|+++.|.|++++++|
T Consensus 23 ~~V~~L-t~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~ 71 (470)
T 3qcp_A 23 SSVVDL-SGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGL 71 (470)
T ss_dssp TTEEEC-SCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTS
T ss_pred CCcEEC-CHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 345555 77999998864 3479999999999999999999999999864
No 101
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.81 E-value=1.9e-12 Score=75.61 Aligned_cols=43 Identities=30% Similarity=0.687 Sum_probs=37.1
Q ss_pred CCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 58 PTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 58 ~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++.++|.+.+.+.+++++|.||++||++|+.+.|.++++++++
T Consensus 6 l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~ 48 (106)
T 2yj7_A 6 VTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEY 48 (106)
Confidence 3678898777666699999999999999999999999988753
No 102
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.18 E-value=1.3e-11 Score=75.44 Aligned_cols=31 Identities=19% Similarity=0.520 Sum_probs=28.2
Q ss_pred cCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 69 KETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 69 ~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
..+++++|+|||+||++|+++.|.+++++++
T Consensus 40 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~ 70 (128)
T 3ul3_B 40 MKNTVIVLYFFAKWCQACTMQSTEMDKLQKY 70 (128)
T ss_dssp SCCSEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEEEECCCCHHHHHHhHHHHHHHHH
Confidence 3459999999999999999999999999875
No 103
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.17 E-value=3.3e-11 Score=85.77 Aligned_cols=46 Identities=9% Similarity=0.100 Sum_probs=36.7
Q ss_pred CCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhH------HHHHHhHhh
Q psy3441 52 QAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLK------PEFLAGRDN 99 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~------p~~~~la~~ 99 (100)
+.++.+ +.++|++++.+. ++|||+||||||+||+... |.++++|+.
T Consensus 13 ~~v~~l-t~~~f~~~i~~~-~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~ 64 (367)
T 3us3_A 13 DRVINV-NAKNYKNVFKKY-EVLALLYHEPPEDDKASQRQFEMEELILELAAQV 64 (367)
T ss_dssp CCCEEC-CTTTHHHHHHHC-SEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CccEEC-CHHHHHHHHhhC-CeEEEEEECCCchhHHHhhhhccccHHHHHHHHH
Confidence 455555 789999999765 9999999999999974433 789998864
No 104
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.17 E-value=2.8e-11 Score=74.11 Aligned_cols=41 Identities=24% Similarity=0.518 Sum_probs=32.8
Q ss_pred CHHHHHHHHh---cCCCcEEEEEECCCChHHhhhHHHHH--HhHhh
Q psy3441 59 TPQALNKLLK---KETRPVLIMFYAPWCGFCKQLKPEFL--AGRDN 99 (100)
Q Consensus 59 ~~~~f~~~~~---~~~~~vlv~F~a~wC~~C~~~~p~~~--~la~~ 99 (100)
+..+|++.+. ..++++||+|||+||++|+.+.|.|+ ++++.
T Consensus 14 ~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~ 59 (133)
T 3fk8_A 14 AWTQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTAL 59 (133)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHH
T ss_pred hHhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHH
Confidence 3456666554 34599999999999999999999999 87754
No 105
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.15 E-value=3.7e-11 Score=76.86 Aligned_cols=37 Identities=27% Similarity=0.733 Sum_probs=31.2
Q ss_pred HHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 61 QALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 61 ~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
++|+...... +++||+|||+||++|+.+.|.|+++++
T Consensus 37 ~~~~~~~~~~-k~vlv~F~a~WC~~C~~~~p~l~~~~~ 73 (164)
T 1sen_A 37 DGKKEAAASG-LPLMVIIHKSWCGACKALKPKFAESTE 73 (164)
T ss_dssp HHHHHHHHHT-CCEEEEEECTTCHHHHHHHHHHHTCHH
T ss_pred HHHHHHHhcC-CeEEEEEECCCCHHHHHHHHHHHHHHH
Confidence 5666665544 999999999999999999999998764
No 106
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.13 E-value=1.2e-11 Score=75.12 Aligned_cols=31 Identities=26% Similarity=0.509 Sum_probs=28.3
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.+++++|+|||+||++|+.+.|.++++++++
T Consensus 25 ~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~ 55 (126)
T 2l57_A 25 EGIPTIIMFKTDTCPYCVEMQKELSYVSKER 55 (126)
T ss_dssp SSSCEEEEEECSSCHHHHHHHHHHHHHHHHS
T ss_pred CCCcEEEEEECCCCccHHHHHHHHHHHHHHh
Confidence 4589999999999999999999999998764
No 107
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.12 E-value=7.2e-11 Score=75.22 Aligned_cols=27 Identities=19% Similarity=0.486 Sum_probs=24.5
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAG 96 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~l 96 (100)
.+++|||+|||+||++|+.|.|.+.+.
T Consensus 43 ~~KpVlV~F~A~WC~~Ck~m~p~~~~~ 69 (151)
T 3ph9_A 43 SKKPLMVIHHLEDCQYSQALKKVFAQN 69 (151)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHC
T ss_pred cCCcEEEEEECCCCHhHHHHHHHHhcC
Confidence 359999999999999999999999864
No 108
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.09 E-value=7.7e-11 Score=75.22 Aligned_cols=32 Identities=16% Similarity=0.403 Sum_probs=26.0
Q ss_pred CHHHHHHHHh---cCCCcEEEEEECCCChHHhhhH
Q psy3441 59 TPQALNKLLK---KETRPVLIMFYAPWCGFCKQLK 90 (100)
Q Consensus 59 ~~~~f~~~~~---~~~~~vlv~F~a~wC~~C~~~~ 90 (100)
+..+|++.+. ..+++|||+|||+||++|+.|.
T Consensus 32 ~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~ 66 (172)
T 3f9u_A 32 KFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKME 66 (172)
T ss_dssp CBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHH
T ss_pred chhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHH
Confidence 4567777664 4569999999999999999984
No 109
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.05 E-value=6.1e-11 Score=72.18 Aligned_cols=40 Identities=25% Similarity=0.519 Sum_probs=31.9
Q ss_pred CHHHHHHHHh---cCCCcEEEEEECCCChHHhhhHHHH---HHhHh
Q psy3441 59 TPQALNKLLK---KETRPVLIMFYAPWCGFCKQLKPEF---LAGRD 98 (100)
Q Consensus 59 ~~~~f~~~~~---~~~~~vlv~F~a~wC~~C~~~~p~~---~~la~ 98 (100)
+..+|++.+. ..++++||+|||+||++|+.+.|.+ +++++
T Consensus 12 ~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~ 57 (130)
T 2kuc_A 12 RELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVAD 57 (130)
T ss_dssp BCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHH
T ss_pred ccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHH
Confidence 4567877764 2458999999999999999999998 55543
No 110
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.02 E-value=2.6e-10 Score=71.08 Aligned_cols=31 Identities=19% Similarity=0.527 Sum_probs=28.2
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||+|||+||++|+.+.|.+.+++++|
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~ 53 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQ 53 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHh
Confidence 3589999999999999999999999998764
No 111
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=99.00 E-value=6.1e-10 Score=73.50 Aligned_cols=30 Identities=20% Similarity=0.502 Sum_probs=27.2
Q ss_pred CCcEEEEEECCCChHHhhhHHHH---HHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEF---LAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~---~~la~~l 100 (100)
++++||+||+.|||||+++.|.+ ++++++|
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~ 145 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKL 145 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHC
Confidence 47999999999999999999999 9887754
No 112
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.99 E-value=2.1e-10 Score=64.72 Aligned_cols=29 Identities=17% Similarity=0.391 Sum_probs=26.4
Q ss_pred CcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.+++|.||++||++|+++.|.++++++++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~ 31 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEM 31 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHC
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHc
Confidence 57899999999999999999999998754
No 113
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.99 E-value=2.9e-10 Score=71.32 Aligned_cols=40 Identities=25% Similarity=0.517 Sum_probs=31.6
Q ss_pred CHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 59 TPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 59 ~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
+++.+..... .++++||+|||+||++|+.+.|.+.+++++
T Consensus 27 ~g~~~~~~~~-~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~ 66 (164)
T 2h30_A 27 DNRPASVYLK-KDKPTLIKFWASWCPLCLSELGQAEKWAQD 66 (164)
T ss_dssp TSSBGGGGCC-TTSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEeeHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 4454443222 358999999999999999999999999875
No 114
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.98 E-value=2.1e-10 Score=72.20 Aligned_cols=44 Identities=5% Similarity=-0.048 Sum_probs=26.3
Q ss_pred EEcCCHHHHHHHHhcCCCcEEEEEECCC--ChHHhhhHHHHHHhHhhC
Q psy3441 55 VHLPTPQALNKLLKKETRPVLIMFYAPW--CGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 55 v~~~~~~~f~~~~~~~~~~vlv~F~a~w--C~~C~~~~p~~~~la~~l 100 (100)
..+ +.++|++.+.+. +.++|.||++| |++|+.+.|.|++++++|
T Consensus 20 ~~l-~~~~f~~~i~~~-~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~ 65 (142)
T 2es7_A 20 QPV-EASTVDDWIKRV-GDGVILLSSDPRRTPEVSDNPVMIAELLREF 65 (142)
T ss_dssp EEC-CCC--------C-CSEEEEECCCSCC----CCHHHHHHHHHHTC
T ss_pred ccc-ccccHHHHHHhC-CCEEEEEECCCCCCccHHHHHHHHHHHHHHh
Confidence 444 668999998765 56889999988 999999999999999875
No 115
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.98 E-value=4.3e-10 Score=69.48 Aligned_cols=31 Identities=13% Similarity=0.189 Sum_probs=28.3
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||+|||+||++|+.+.|.+.++.++|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~ 61 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKF 61 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHh
Confidence 3589999999999999999999999998764
No 116
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.98 E-value=2.5e-10 Score=70.45 Aligned_cols=29 Identities=17% Similarity=0.281 Sum_probs=26.5
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHH---hHhh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLA---GRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~---la~~ 99 (100)
++++||+|||+||++|+.+.|.+.+ +.++
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~ 62 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGF 62 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHH
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHH
Confidence 5899999999999999999999999 7654
No 117
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.98 E-value=3.2e-10 Score=70.03 Aligned_cols=30 Identities=20% Similarity=0.532 Sum_probs=27.4
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++++||+|||+||++|+.+.|.+.+++++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~ 56 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKA 56 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999999875
No 118
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.97 E-value=3.9e-10 Score=73.33 Aligned_cols=32 Identities=22% Similarity=0.474 Sum_probs=28.3
Q ss_pred CHHHHHHHHhcCCCcEEEEEECCCChHHhhhHH
Q psy3441 59 TPQALNKLLKKETRPVLIMFYAPWCGFCKQLKP 91 (100)
Q Consensus 59 ~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p 91 (100)
..+.|+...... ++|||+|||+||++|+.|.|
T Consensus 28 ~~ea~~~A~~~~-KpVlvdF~A~WC~~Ck~m~~ 59 (173)
T 3ira_A 28 GEEAFEKARKEN-KPVFLSIGYSTCHWCHMMAH 59 (173)
T ss_dssp SHHHHHHHHHHT-CCEEEEEECTTCHHHHHHHH
T ss_pred CHHHHHHHHHhC-CCEEEecccchhHhhccccc
Confidence 467888877665 99999999999999999998
No 119
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.96 E-value=4.1e-10 Score=69.76 Aligned_cols=30 Identities=23% Similarity=0.563 Sum_probs=27.5
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++++||+|||+||++|+.+.|.+.+++++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~ 56 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDK 56 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999999875
No 120
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.51 E-value=6.6e-11 Score=72.09 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=29.0
Q ss_pred HHHHHHhcCCCcEEEEEECCCChHHhhhHHHH---HHhHhh
Q psy3441 62 ALNKLLKKETRPVLIMFYAPWCGFCKQLKPEF---LAGRDN 99 (100)
Q Consensus 62 ~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~---~~la~~ 99 (100)
.+..... .++++||+|||+||++|+.+.|.+ +++++.
T Consensus 11 ~~~~~~~-~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~ 50 (130)
T 2lst_A 11 ALALAQA-HGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRL 50 (130)
Confidence 3443333 348999999999999999999999 777654
No 121
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.96 E-value=4.1e-10 Score=71.74 Aligned_cols=30 Identities=23% Similarity=0.657 Sum_probs=27.5
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||+|||+||++|+++.|.+.+++++|
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~ 77 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKH 77 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHh
Confidence 589999999999999999999999998753
No 122
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.96 E-value=4.6e-10 Score=62.49 Aligned_cols=27 Identities=22% Similarity=0.417 Sum_probs=24.2
Q ss_pred EEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 74 VLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 74 vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
+.|+|||+||++|+.+.|.++++++++
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~ 28 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKEL 28 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHT
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHc
Confidence 468999999999999999999998754
No 123
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.95 E-value=6.8e-10 Score=69.37 Aligned_cols=30 Identities=13% Similarity=0.207 Sum_probs=27.5
Q ss_pred CCcEEEEEECCCChHHhh-hHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGFCKQ-LKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~-~~p~~~~la~~l 100 (100)
++++||+|||+||++|+. +.|.+.+++++|
T Consensus 30 gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~ 60 (160)
T 3lor_A 30 GKVVVVEVFQMLCPGCVNHGVPQAQKIHRMI 60 (160)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHS
T ss_pred CCEEEEEEEcCCCcchhhhhhHHHHHHHHHh
Confidence 589999999999999999 699999998764
No 124
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.94 E-value=6.4e-10 Score=69.45 Aligned_cols=30 Identities=17% Similarity=0.213 Sum_probs=27.5
Q ss_pred CCcEEEEEECCCChHHhhh-HHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGFCKQL-KPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~-~p~~~~la~~l 100 (100)
++++||+|||+||++|+.+ .|.+.+++++|
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~ 58 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAF 58 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHS
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHh
Confidence 5899999999999999996 99999998764
No 125
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.94 E-value=5.8e-10 Score=68.65 Aligned_cols=30 Identities=23% Similarity=0.604 Sum_probs=27.4
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++++||.|||+||++|+.+.|.+.+++++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~ 56 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEK 56 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999999865
No 126
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.93 E-value=1.3e-09 Score=67.34 Aligned_cols=44 Identities=11% Similarity=0.200 Sum_probs=37.6
Q ss_pred eEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++++ +.++|++++.+ +.+++|+|||+ |++|+.+.|.++++|++|
T Consensus 8 v~~~-t~~~f~~~~~~-~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~ 51 (133)
T 2djk_A 8 IGEI-GPETYSDYMSA-GIPLAYIFAET-AEERKELSDKLKPIAEAQ 51 (133)
T ss_dssp SEEC-CHHHHHHHHHT-TSCEEEEECSC-SSSHHHHHHHHHHHHHSS
T ss_pred eecc-ChHHHHHHhcC-CCCEEEEEecC-hhhHHHHHHHHHHHHHHh
Confidence 3444 78999988654 48999999999 899999999999999875
No 127
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.92 E-value=9.5e-10 Score=67.26 Aligned_cols=31 Identities=26% Similarity=0.649 Sum_probs=28.3
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.||++||++|+.+.|.+.++++++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~ 63 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAH 63 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 4589999999999999999999999998764
No 128
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.92 E-value=6.9e-10 Score=67.11 Aligned_cols=31 Identities=26% Similarity=0.623 Sum_probs=28.0
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.+++++|.||++||++|+.+.|.+.++++++
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~ 54 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASH 54 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHc
Confidence 3589999999999999999999999998764
No 129
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.92 E-value=1.2e-09 Score=66.20 Aligned_cols=31 Identities=26% Similarity=0.794 Sum_probs=28.1
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.+++++|.||++||++|+.+.|.+.++++++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~ 53 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAAN 53 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHC
Confidence 3589999999999999999999999998764
No 130
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.90 E-value=3e-10 Score=64.11 Aligned_cols=27 Identities=15% Similarity=0.346 Sum_probs=24.7
Q ss_pred cEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 73 PVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 73 ~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
..+|.|||+||++|+++.|.+++++++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~ 29 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKE 29 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHH
Confidence 568999999999999999999999874
No 131
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.90 E-value=2e-09 Score=64.43 Aligned_cols=36 Identities=22% Similarity=0.602 Sum_probs=27.4
Q ss_pred HHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 61 QALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 61 ~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
+.+++++. . +.+++ ||++||++|+.+.|.+++++.+
T Consensus 11 ~~~~~~~~-~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~ 46 (116)
T 2e7p_A 11 KKAKELAS-S-APVVV-FSKTYCGYCNRVKQLLTQVGAS 46 (116)
T ss_dssp HHHHHHHT-S-SSEEE-EECTTCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHc-C-CCEEE-EECCCChhHHHHHHHHHHcCCC
Confidence 34455553 3 55666 9999999999999999998754
No 132
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.89 E-value=1.4e-09 Score=68.76 Aligned_cols=29 Identities=24% Similarity=0.579 Sum_probs=26.9
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
.++++||+||++||++|+.+.|.++++++
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~ 78 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSA 78 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999876
No 133
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.89 E-value=7.9e-10 Score=67.84 Aligned_cols=40 Identities=28% Similarity=0.508 Sum_probs=31.9
Q ss_pred CHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 59 TPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 59 ~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
+++.+..... .++++||.||++||++|+.+.|.+.+++++
T Consensus 18 ~g~~~~~~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~ 57 (148)
T 2b5x_A 18 NGEVTREQLI-GEKPTLIHFWSISCHLCKEAMPQVNEFRDK 57 (148)
T ss_dssp SCCCCHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred cCcccchhhc-CCCEEEEEEEcCCCHHHHHHhHHHHHHHHH
Confidence 4455544333 348999999999999999999999998875
No 134
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.89 E-value=5.6e-10 Score=68.63 Aligned_cols=31 Identities=23% Similarity=0.470 Sum_probs=28.2
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.||++||++|+.+.|.+.+++++|
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~ 62 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEY 62 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHh
Confidence 3589999999999999999999999998764
No 135
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.88 E-value=7.8e-10 Score=67.92 Aligned_cols=30 Identities=20% Similarity=0.531 Sum_probs=26.0
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHH---hHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLA---GRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~---la~~ 99 (100)
.++++||+|||+||++|+.+.|.+.+ +.++
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~ 58 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEM 58 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHH
Confidence 35899999999999999999999887 5543
No 136
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.88 E-value=9.3e-10 Score=70.76 Aligned_cols=31 Identities=10% Similarity=0.082 Sum_probs=28.1
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.|||+||++|+...|.+.++.++|
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~ 67 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEF 67 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHh
Confidence 3589999999999999999999999998753
No 137
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.87 E-value=2.1e-09 Score=67.73 Aligned_cols=29 Identities=17% Similarity=0.691 Sum_probs=25.0
Q ss_pred CCCcEEEEEE-CCCChHHhhhHHHH---HHhHh
Q psy3441 70 ETRPVLIMFY-APWCGFCKQLKPEF---LAGRD 98 (100)
Q Consensus 70 ~~~~vlv~F~-a~wC~~C~~~~p~~---~~la~ 98 (100)
.++++||+|| |+||++|+++.|.+ .++++
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~ 78 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKH 78 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHH
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHH
Confidence 3599999999 99999999999999 56543
No 138
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.87 E-value=9.9e-10 Score=72.75 Aligned_cols=31 Identities=16% Similarity=0.035 Sum_probs=27.8
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.|||+||++|++..|.++++.++|
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~ 76 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRL 76 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHc
Confidence 3589999999999999999999999998753
No 139
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.87 E-value=1e-09 Score=68.72 Aligned_cols=30 Identities=20% Similarity=0.698 Sum_probs=27.5
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++++||.||++||++|+.+.|.+.+++++
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~ 62 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKT 62 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999999875
No 140
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.86 E-value=1.6e-09 Score=73.99 Aligned_cols=42 Identities=17% Similarity=0.233 Sum_probs=35.0
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEE--CCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFY--APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~--a~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+ +.++|++++.+ +++|||+|| ||||+ +.|.|+++|++|
T Consensus 17 ~v~~L-t~~nF~~vi~~-~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~ 60 (248)
T 2c0g_A 17 GCVDL-DELSFEKTVER-FPYSVVKFDIASPYGE----KHEAFTAFSKSA 60 (248)
T ss_dssp TCEEC-CTTTHHHHHTT-SSEEEEEEEESSCCSH----HHHHHHHHHHHH
T ss_pred CcEEC-CHHHHHHHHhc-CCCEEEEEECCCCCCc----cHHHHHHHHHHH
Confidence 44555 78999997754 489999999 99999 999999999753
No 141
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.85 E-value=2.2e-09 Score=64.63 Aligned_cols=30 Identities=23% Similarity=0.594 Sum_probs=27.5
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++++||.||++||++|+.+.|.+.+++++
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~ 50 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKE 50 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999999875
No 142
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.85 E-value=1.6e-09 Score=69.43 Aligned_cols=31 Identities=19% Similarity=0.561 Sum_probs=27.9
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.||++||++|+.+.|.+.+++++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~ 88 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEEL 88 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHH
Confidence 3589999999999999999999999998753
No 143
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.85 E-value=1.5e-09 Score=67.60 Aligned_cols=30 Identities=23% Similarity=0.559 Sum_probs=27.3
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++++||.|||+||++|+.+.|.+.+++++
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~ 57 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNA 57 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHH
Confidence 358999999999999999999999998765
No 144
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.84 E-value=1.6e-09 Score=67.93 Aligned_cols=30 Identities=13% Similarity=-0.001 Sum_probs=27.3
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.|||+||++|+...|.+.+++++|
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~ 64 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKY 64 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHh
Confidence 489999999999999999999999988753
No 145
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.84 E-value=2.2e-09 Score=67.63 Aligned_cols=31 Identities=19% Similarity=0.411 Sum_probs=28.3
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.||++||++|+.+.|.+.++.+++
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~ 66 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKY 66 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHc
Confidence 3589999999999999999999999998764
No 146
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.84 E-value=2e-09 Score=66.84 Aligned_cols=30 Identities=23% Similarity=0.600 Sum_probs=27.3
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++++||.||++||++|+.+.|.+.+++++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~ 54 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKH 54 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999998765
No 147
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.84 E-value=1.6e-09 Score=68.22 Aligned_cols=30 Identities=17% Similarity=0.114 Sum_probs=27.3
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++++||.|||+||++|+...|.+.++.++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~ 59 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTR 59 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHH
Confidence 358999999999999999999999998765
No 148
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.82 E-value=2.2e-09 Score=74.94 Aligned_cols=38 Identities=29% Similarity=0.425 Sum_probs=30.9
Q ss_pred HHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 60 PQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 60 ~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
...+.+.+.+. .+|+||||||+||+++.|.|+++|+++
T Consensus 189 ~~~la~~l~~~---~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 189 AVGLAAHLRQI---GGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHHT---TCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHHhCCC---CEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 45666666544 468999999999999999999998764
No 149
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.82 E-value=1.9e-09 Score=69.43 Aligned_cols=31 Identities=23% Similarity=0.275 Sum_probs=27.8
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.|||+||++|+...|.+.+++++|
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~ 78 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDL 78 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHh
Confidence 3589999999999999999999999998753
No 150
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.82 E-value=2e-09 Score=67.84 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=27.4
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++++||.|||+||++|+...|.+.+++++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~ 60 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEK 60 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHH
Confidence 358999999999999999999999998765
No 151
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.82 E-value=1.3e-09 Score=70.63 Aligned_cols=31 Identities=23% Similarity=0.258 Sum_probs=27.9
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||+|||+||++|+...|.+.++.++|
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~ 75 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKY 75 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHh
Confidence 3589999999999999999999999998753
No 152
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.82 E-value=3.7e-09 Score=66.31 Aligned_cols=31 Identities=26% Similarity=0.683 Sum_probs=28.2
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.||++||++|+.+.|.+.++++++
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~ 70 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSF 70 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHc
Confidence 3589999999999999999999999998764
No 153
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.30 E-value=5.1e-10 Score=68.65 Aligned_cols=30 Identities=23% Similarity=0.524 Sum_probs=26.9
Q ss_pred CC-cEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TR-PVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~-~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++ ++||.|||+||++|+.+.|.+.++++++
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~ 55 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSEL 55 (143)
Confidence 36 9999999999999999999999987653
No 154
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.79 E-value=5.3e-09 Score=64.87 Aligned_cols=31 Identities=23% Similarity=0.662 Sum_probs=28.1
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.||++||++|+.+.|.+.++++++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~ 57 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAM 57 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHh
Confidence 3589999999999999999999999998764
No 155
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.79 E-value=1.2e-09 Score=67.10 Aligned_cols=30 Identities=20% Similarity=0.559 Sum_probs=27.5
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++++||.||++||++|+.+.|.+.++.++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~ 59 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLK 59 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHH
Confidence 458999999999999999999999998765
No 156
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.78 E-value=4.1e-09 Score=65.31 Aligned_cols=31 Identities=23% Similarity=0.493 Sum_probs=27.8
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.||++||++|+.+.|.+.++++++
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~ 57 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDY 57 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHG
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHh
Confidence 3589999999999999999999999988753
No 157
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.78 E-value=4.9e-09 Score=65.03 Aligned_cols=28 Identities=21% Similarity=0.474 Sum_probs=26.1
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
++++||.||++||++|+.+.|.+.++++
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~ 69 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGK 69 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTT
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHh
Confidence 5899999999999999999999999865
No 158
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.78 E-value=4.4e-09 Score=65.31 Aligned_cols=29 Identities=31% Similarity=0.799 Sum_probs=27.0
Q ss_pred CcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
+++||.|||+||++|+.+.|.+.++++++
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~ 59 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET 59 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc
Confidence 89999999999999999999999998753
No 159
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.77 E-value=4.2e-09 Score=65.17 Aligned_cols=31 Identities=29% Similarity=0.582 Sum_probs=27.8
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.||++||++|+.+.|.+.+++++|
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~ 57 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKY 57 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHh
Confidence 3589999999999999999999999998753
No 160
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.77 E-value=6.9e-09 Score=66.55 Aligned_cols=29 Identities=24% Similarity=0.696 Sum_probs=26.8
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
++++||.||++||++|+.+.|.+++++++
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~ 86 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQ 86 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHC
Confidence 58999999999999999999999998763
No 161
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.76 E-value=4.6e-09 Score=65.02 Aligned_cols=30 Identities=23% Similarity=0.590 Sum_probs=27.5
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.||++||++|+.+.|.+.++.+++
T Consensus 30 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~ 59 (152)
T 2lja_A 30 GKYIYIDVWATWCGPCRGELPALKELEEKY 59 (152)
T ss_dssp TSEEEEEECCSSCCGGGGTHHHHHHHHHHS
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHh
Confidence 589999999999999999999999988754
No 162
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.75 E-value=6.5e-09 Score=66.86 Aligned_cols=30 Identities=17% Similarity=0.299 Sum_probs=27.8
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.|||+||++|+.+.|.+++++++|
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~ 62 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERY 62 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHT
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHh
Confidence 589999999999999999999999998764
No 163
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.75 E-value=4.8e-09 Score=67.97 Aligned_cols=30 Identities=23% Similarity=0.266 Sum_probs=27.4
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++++||.|||+||++|+...|.+.++.++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~ 76 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNK 76 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHH
Confidence 358999999999999999999999998765
No 164
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.75 E-value=8.7e-09 Score=70.02 Aligned_cols=41 Identities=24% Similarity=0.371 Sum_probs=34.9
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEEC--CCChHHhhhHHHHHHhHhh
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYA--PWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a--~wC~~C~~~~p~~~~la~~ 99 (100)
.++.+ +.++|++++... ++|||+||| |||+ +.|.|+++|+.
T Consensus 6 ~v~~L-t~~nF~~~i~~~-~~vlV~FyA~~pWCg----l~P~~e~lA~~ 48 (240)
T 2qc7_A 6 GALPL-DTVTFYKVIPKS-KFVLVKFDTQYPYGE----KQDEFKRLAEN 48 (240)
T ss_dssp TCEEC-CTTHHHHHGGGC-SEEEEEECCSSCCSH----HHHHHHHHHHH
T ss_pred CceEC-CHHHHHHHHcCC-CCEEEEEeCCCCCCc----chHHHHHHHHH
Confidence 34555 779999988654 899999999 9999 99999999975
No 165
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.75 E-value=4.2e-09 Score=64.45 Aligned_cols=24 Identities=29% Similarity=0.609 Sum_probs=20.5
Q ss_pred CCcEEEEEECCCChHHhhhHHHHH
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFL 94 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~ 94 (100)
...+||+|||+||++|+.|.+.+.
T Consensus 18 ~~~~LV~F~A~wC~~Ck~~~~~i~ 41 (116)
T 3dml_A 18 AELRLLMFEQPGCLYCARWDAEIA 41 (116)
T ss_dssp -CEEEEEEECTTCHHHHHHHHHTT
T ss_pred CCCEEEEEECCCCHHHHHHHHHHH
Confidence 478999999999999999987554
No 166
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.74 E-value=6e-09 Score=66.82 Aligned_cols=30 Identities=20% Similarity=0.568 Sum_probs=27.4
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++++||.||++||++|+.+.|.+.++.++
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~ 88 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGK 88 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHH
Confidence 358999999999999999999999998765
No 167
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.74 E-value=3.3e-09 Score=67.46 Aligned_cols=29 Identities=31% Similarity=0.330 Sum_probs=26.3
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.++++||.|||+||++|+ ..|.+.++.++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~ 59 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKR 59 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHH
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHH
Confidence 358999999999999999 99999998765
No 168
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.74 E-value=5e-09 Score=67.39 Aligned_cols=31 Identities=10% Similarity=0.066 Sum_probs=27.8
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.|||+||++|+...|.+.++.++|
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~ 76 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARY 76 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHH
Confidence 3589999999999999999999999988753
No 169
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.73 E-value=5.3e-09 Score=67.52 Aligned_cols=31 Identities=6% Similarity=-0.079 Sum_probs=27.7
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.|||+||++|+...|.+.++.++|
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~ 78 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARY 78 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHh
Confidence 3589999999999999999999999987653
No 170
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.73 E-value=5.6e-08 Score=64.76 Aligned_cols=81 Identities=10% Similarity=0.046 Sum_probs=63.1
Q ss_pred eeEEEccCCc-ccccCCC----ccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCC
Q psy3441 9 YVIKHYKDGE-FNKNYER----KETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWC 83 (100)
Q Consensus 9 ~ti~~~~~g~-~~~~y~g----~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC 83 (100)
++|++|+++. ....|+| .++.+.|.+|++....| .+...+.+|+..+..+.-..+++.|+.+||
T Consensus 75 p~i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~p-----------lv~e~t~~n~~~~~~~~~~~~~l~f~~~~~ 143 (227)
T 4f9z_D 75 NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSLH-----------MVTEYNPVTVIGLFNSVIQIHLLLIMNKAS 143 (227)
T ss_dssp SEEEEEETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCC-----------SEEECCHHHHHHHHHSSCCEEEEEEECTTS
T ss_pred CeEEEEEecCcccccccccccCCCCHHHHHHHHHHhCCC-----------ceeecCcccHHHHhccCCceEEEEEEcCCc
Confidence 5788888753 3456774 79999999999988542 244558999999887653455566779999
Q ss_pred hHHhhhHHHHHHhHhhC
Q psy3441 84 GFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 84 ~~C~~~~p~~~~la~~l 100 (100)
++|..+.+.|+++|+++
T Consensus 144 ~~~~~~~~~~~~vAk~~ 160 (227)
T 4f9z_D 144 PEYEENMHRYQKAAKLF 160 (227)
T ss_dssp TTHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHh
Confidence 99999999999999864
No 171
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.73 E-value=3.2e-08 Score=73.21 Aligned_cols=81 Identities=9% Similarity=0.058 Sum_probs=55.6
Q ss_pred CeeEEEccCCc-ccccCCCccCHHHHHHHhhC---CCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCC
Q psy3441 8 PYVIKHYKDGE-FNKNYERKETVSAFVNFLKD---PKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWC 83 (100)
Q Consensus 8 p~ti~~~~~g~-~~~~y~g~~~~~~l~~f~~~---~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC 83 (100)
.|+|.+.++|+ .-..|.|-..-.+|..|+.. ..+.. . ..+.+.++.+........++.|||+||
T Consensus 62 ~p~~~~~~~~~~~~i~f~g~p~g~e~~s~~~~l~~~~~~~-----------~-~~~~~~~~~i~~~~~~~~i~~f~a~~C 129 (521)
T 1hyu_A 62 KPSFLITNPGSQQGPRFAGSPLGHEFTSLVLALLWTGGHP-----------S-KEAQSLLEQIRDIDGDFEFETYYSLSC 129 (521)
T ss_dssp SSEEEEECTTCCCSCEEESCCCGGGHHHHHHHHHHHTTCC-----------C-CSCHHHHHHHHHCCSCEEEEEEECTTC
T ss_pred CCEEEEecCCCcceEEEeccCcchhHHHHHHHHHhhcCCC-----------C-CCCHHHHHHHHhcCCCcceEEEECCCC
Confidence 46777777664 34567776666666665543 33311 1 226677777765455677899999999
Q ss_pred hHHhhhHHHHHHhHhhC
Q psy3441 84 GFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 84 ~~C~~~~p~~~~la~~l 100 (100)
++|+.+.|.+++++.++
T Consensus 130 ~~C~~~~~~l~~~a~~~ 146 (521)
T 1hyu_A 130 HNCPDVVQALNLMAVLN 146 (521)
T ss_dssp SSHHHHHHHHHHHHHHC
T ss_pred cCcHHHHHHHHHHHhHc
Confidence 99999999999998653
No 172
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.70 E-value=9.8e-09 Score=64.70 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=27.9
Q ss_pred CCCcEEEEEECCCChH-HhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGF-CKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~-C~~~~p~~~~la~~l 100 (100)
.++++||.||++||++ |+.+.|.+.++.++|
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~ 65 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKL 65 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHh
Confidence 3589999999999997 999999999998764
No 173
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.69 E-value=7.6e-09 Score=64.23 Aligned_cols=30 Identities=27% Similarity=0.393 Sum_probs=27.5
Q ss_pred CCcEEEEEECCCChH--HhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGF--CKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~--C~~~~p~~~~la~~l 100 (100)
++++||.|||+||++ |+.+.|.+.++.++|
T Consensus 33 gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~ 64 (150)
T 3fw2_A 33 QKSLLINFWASWNDSISQKQSNSELREIYKKY 64 (150)
T ss_dssp TSEEEEEEECTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHHHHh
Confidence 589999999999999 999999999998753
No 174
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.67 E-value=1.1e-08 Score=67.43 Aligned_cols=41 Identities=22% Similarity=0.360 Sum_probs=32.6
Q ss_pred CHHHHHHHH-hc-CCCcEEEEEECC-CChHHhhhHHHHHHhHhh
Q psy3441 59 TPQALNKLL-KK-ETRPVLIMFYAP-WCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 59 ~~~~f~~~~-~~-~~~~vlv~F~a~-wC~~C~~~~p~~~~la~~ 99 (100)
+.+.+.+++ .+ .+..++|.|||+ ||++|+++.|.++++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~ 51 (226)
T 1a8l_A 8 DKKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL 51 (226)
T ss_dssp HHHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh
Confidence 456677777 33 335677999999 999999999999999863
No 175
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.66 E-value=5.8e-08 Score=69.01 Aligned_cols=77 Identities=19% Similarity=0.243 Sum_probs=61.4
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhh
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQ 88 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~ 88 (100)
||+++|++|+. ..|.|.++.+.|.+|+++..++ .+..+.+.+++++++....+.++|.|+++||. .
T Consensus 93 PTl~~f~~G~~-~~y~G~~~~~~i~~~i~~~~~~----------~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~ 158 (367)
T 3us3_A 93 DSIYVFKEDEV-IEYDGEFSADTLVEFLLDVLED----------PVELIEGERELQAFENIEDEIKLIGYFKNKDS---E 158 (367)
T ss_dssp TEEEEEETTEE-EECCSCCSHHHHHHHHHHHHSC----------SEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---H
T ss_pred ceEEEEECCcE-EEeCCCCCHHHHHHHHHHhcCC----------CcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---h
Confidence 68899999865 5899999999999999987542 34567678899999873348899999999976 4
Q ss_pred hHHHHHHhHhh
Q psy3441 89 LKPEFLAGRDN 99 (100)
Q Consensus 89 ~~p~~~~la~~ 99 (100)
..+.|.++|..
T Consensus 159 ~~~~f~~~A~~ 169 (367)
T 3us3_A 159 HYKAFKEAAEE 169 (367)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 56777777764
No 176
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.66 E-value=1.1e-08 Score=64.56 Aligned_cols=29 Identities=17% Similarity=0.195 Sum_probs=26.8
Q ss_pred CCcEEEEEECCCChH-HhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFYAPWCGF-CKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~-C~~~~p~~~~la~~ 99 (100)
++++||.||++||++ |+...|.+.++.++
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~ 55 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQ 55 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHH
Confidence 589999999999998 99999999998765
No 177
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.11 E-value=2.6e-09 Score=66.89 Aligned_cols=29 Identities=28% Similarity=0.596 Sum_probs=25.9
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHH-hHhh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLA-GRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~-la~~ 99 (100)
++++||.|||+||++|+.+.|.+.+ +.++
T Consensus 33 gk~vll~f~a~~C~~C~~~~~~l~~~l~~~ 62 (159)
T 2ls5_A 33 GKVVMLQFTASWCGVCRKEMPFIEKDIWLK 62 (159)
Confidence 4899999999999999999999998 6544
No 178
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.65 E-value=1.6e-07 Score=66.09 Aligned_cols=77 Identities=14% Similarity=0.178 Sum_probs=61.5
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHh-cCCCcEEEEEECCCChHHh
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLK-KETRPVLIMFYAPWCGFCK 87 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~-~~~~~vlv~F~a~wC~~C~ 87 (100)
||+++|++|+ ...|.|.++.+.|.+|+++..++ .+..+.+.+++++++. +. +.++|.|+++||..
T Consensus 91 Pt~~~~~~g~-~~~~~G~~~~~~l~~~i~~~~~~----------~~~~l~~~~~~~~~~~~~~-~~~vv~ff~~~~~~-- 156 (350)
T 1sji_A 91 GSLYVLKGDR-TIEFDGEFAADVLVEFLLDLIED----------PVEIINSKLEVQAFERIED-QIKLIGFFKSEESE-- 156 (350)
T ss_dssp TEEEEEETTE-EEEECSCCCHHHHHHHHHTTSSC----------SEEECCSHHHHHHHHHCCS-SCEEEEECSCTTSH--
T ss_pred ceEEEEECCc-EEEecCCCCHHHHHHHHHHhcCC----------cceeccchHHHHHHhccCC-CcEEEEEECCCCcH--
Confidence 6788889997 56899999999999999988652 2456667889999987 55 67899999999754
Q ss_pred hhHHHHHHhHhhC
Q psy3441 88 QLKPEFLAGRDNL 100 (100)
Q Consensus 88 ~~~p~~~~la~~l 100 (100)
..+.|.++|+.+
T Consensus 157 -~~~~~~~~A~~~ 168 (350)
T 1sji_A 157 -YYKAFEEAAEHF 168 (350)
T ss_dssp -HHHHHHHHHHHT
T ss_pred -HHHHHHHHHHhh
Confidence 467888888754
No 179
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.65 E-value=1.5e-08 Score=72.29 Aligned_cols=30 Identities=27% Similarity=0.397 Sum_probs=27.6
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||+|||+||++|+.+.|.+.+++++|
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~ 111 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAY 111 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHh
Confidence 589999999999999999999999998753
No 180
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.65 E-value=1.6e-08 Score=65.20 Aligned_cols=29 Identities=24% Similarity=0.534 Sum_probs=26.1
Q ss_pred CC-cEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 71 TR-PVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~-~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
++ ++||+|||+||++|+.+.|.+.++.++
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~ 74 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLAND 74 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHH
Confidence 35 599999999999999999999999865
No 181
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.64 E-value=1.5e-08 Score=63.41 Aligned_cols=29 Identities=21% Similarity=0.269 Sum_probs=26.7
Q ss_pred CCcEEEEEECCCChH-HhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFYAPWCGF-CKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~-C~~~~p~~~~la~~ 99 (100)
++++||.||++||++ |+...|.+.++.++
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~ 52 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDE 52 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHH
Confidence 589999999999998 99999999998765
No 182
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.63 E-value=3e-08 Score=59.80 Aligned_cols=28 Identities=11% Similarity=0.325 Sum_probs=25.4
Q ss_pred CcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
...|+.||++||++|+++.|.+++++++
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e 56 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKK 56 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHh
Confidence 4679999999999999999999998765
No 183
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.61 E-value=2.4e-08 Score=56.37 Aligned_cols=26 Identities=19% Similarity=0.376 Sum_probs=22.7
Q ss_pred EEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 74 VLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 74 vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
-++.||++||++|+++.|.+++++++
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~ 28 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDP 28 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCT
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHh
Confidence 36779999999999999999988764
No 184
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.60 E-value=2.7e-08 Score=62.21 Aligned_cols=30 Identities=17% Similarity=0.415 Sum_probs=27.1
Q ss_pred CC-cEEEEEE-CCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TR-PVLIMFY-APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~-~vlv~F~-a~wC~~C~~~~p~~~~la~~l 100 (100)
++ ++||.|| |+||++|+...|.+.+++++|
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~ 66 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEF 66 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGT
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHH
Confidence 35 8999998 999999999999999998764
No 185
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.60 E-value=2.4e-08 Score=66.22 Aligned_cols=30 Identities=13% Similarity=0.320 Sum_probs=26.8
Q ss_pred CC-cEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TR-PVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~-~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++ ++||.|||+||++|+.+.|.+.+++++|
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~ 88 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDY 88 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHH
Confidence 46 4999999999999999999999998753
No 186
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.57 E-value=3e-08 Score=66.19 Aligned_cols=30 Identities=27% Similarity=0.484 Sum_probs=26.2
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.+++|||.|||+||++|+ ..|.++++.++|
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~ 84 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEEL 84 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHh
Confidence 358999999999999999 889999987653
No 187
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.56 E-value=3.8e-08 Score=62.01 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=26.8
Q ss_pred CCc-EEEEEE-CCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRP-VLIMFY-APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~-vlv~F~-a~wC~~C~~~~p~~~~la~~l 100 (100)
++. +||.|| |+||++|+...|.+.++.++|
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~ 59 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLL 59 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHH
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHH
Confidence 466 999999 999999999999999988753
No 188
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.51 E-value=3.5e-08 Score=62.32 Aligned_cols=30 Identities=13% Similarity=0.237 Sum_probs=27.0
Q ss_pred CCCcEEEEEECCCCh-HHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCG-FCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~-~C~~~~p~~~~la~~ 99 (100)
.++++||.||++||+ +|+...|.+.++.++
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~ 62 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKK 62 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHH
Confidence 358999999999999 999999999998765
No 189
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.49 E-value=5.2e-08 Score=64.56 Aligned_cols=30 Identities=23% Similarity=0.221 Sum_probs=25.8
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.+++|||.|||+||++| ...|.+.++.++|
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~ 66 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEEL 66 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHh
Confidence 35899999999999999 6789999987653
No 190
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.49 E-value=6.6e-08 Score=60.98 Aligned_cols=30 Identities=17% Similarity=0.297 Sum_probs=27.3
Q ss_pred CCcEEEEEECCC-ChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPW-CGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~w-C~~C~~~~p~~~~la~~l 100 (100)
+++++|.||++| |++|+...|.+.++.++|
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~ 74 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKL 74 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHc
Confidence 489999999999 999999999999998753
No 191
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.49 E-value=4e-08 Score=58.04 Aligned_cols=27 Identities=30% Similarity=0.547 Sum_probs=24.2
Q ss_pred CcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
.++++.|+++||++|+++.+.++++++
T Consensus 16 ~~~v~~f~~~~C~~C~~~~~~L~~l~~ 42 (100)
T 1wjk_A 16 LPVLTLFTKAPCPLCDEAKEVLQPYKD 42 (100)
T ss_dssp CCEEEEEECSSCHHHHHHHHHTSTTSS
T ss_pred CCEEEEEeCCCCcchHHHHHHHHHhhh
Confidence 678999999999999999999987754
No 192
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.48 E-value=1.4e-07 Score=61.20 Aligned_cols=30 Identities=17% Similarity=0.336 Sum_probs=27.5
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.||++||++|+++.|.++++.+++
T Consensus 25 ~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~ 54 (195)
T 3hd5_A 25 GKIEVLEFFAYTCPHCAAIEPMVEDWAKTA 54 (195)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEEECCCCccHHHhhHHHHHHHHHC
Confidence 588999999999999999999999998764
No 193
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.48 E-value=4.5e-08 Score=63.06 Aligned_cols=29 Identities=14% Similarity=0.260 Sum_probs=26.9
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~ 99 (100)
++++||.|| |+||++|+...|.+.+++++
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~ 60 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAE 60 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHH
Confidence 489999999 99999999999999998765
No 194
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.47 E-value=7.9e-08 Score=62.83 Aligned_cols=29 Identities=14% Similarity=0.078 Sum_probs=26.0
Q ss_pred CCcEEEEEECCCChH-HhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFYAPWCGF-CKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~-C~~~~p~~~~la~~ 99 (100)
++++||.||++||++ |+...|.+.++.++
T Consensus 41 Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~ 70 (200)
T 2b7k_A 41 GKFSIIYFGFSNCPDICPDELDKLGLWLNT 70 (200)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCcchhHHHHHHHHHHHHH
Confidence 589999999999997 99999999997553
No 195
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.45 E-value=9.4e-08 Score=63.39 Aligned_cols=28 Identities=21% Similarity=0.550 Sum_probs=25.7
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
++.+|+.||++||++|+++.|.++++++
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~l~~ 113 (216)
T 1eej_A 86 EKHVITVFTDITCGYCHKLHEQMADYNA 113 (216)
T ss_dssp CCEEEEEEECTTCHHHHHHHTTHHHHHH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHh
Confidence 4789999999999999999999998864
No 196
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.45 E-value=5.5e-08 Score=63.17 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=26.9
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~ 99 (100)
++++||.|| |+||++|+...|.+.++.++
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~ 74 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDE 74 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHH
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHH
Confidence 589999999 99999999999999998765
No 197
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.44 E-value=8.5e-08 Score=62.33 Aligned_cols=30 Identities=13% Similarity=0.238 Sum_probs=27.2
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.|| |+||++|+...|.+.+++++|
T Consensus 34 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~ 64 (197)
T 1qmv_A 34 GKYVVLFFYPLDFTFVAPTEIIAFSNRAEDF 64 (197)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 489999999 999999999999999987653
No 198
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.44 E-value=4.9e-08 Score=63.48 Aligned_cols=29 Identities=14% Similarity=0.267 Sum_probs=26.8
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~ 99 (100)
++++||.|| |+||++|+...|.+.++.++
T Consensus 33 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~ 62 (198)
T 1zof_A 33 KNGVILFFWPKDFTFVCPTEIIAFDKRVKD 62 (198)
T ss_dssp SSEEEEEECSCTTCSSCCTHHHHHHHTHHH
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHHHHHH
Confidence 589999999 99999999999999998765
No 199
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.42 E-value=2e-07 Score=61.57 Aligned_cols=40 Identities=23% Similarity=0.289 Sum_probs=31.1
Q ss_pred HHHHHHHH-hcCCCcEEEEEE-----CCCChHHhhhHHHHHHhHhh
Q psy3441 60 PQALNKLL-KKETRPVLIMFY-----APWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 60 ~~~f~~~~-~~~~~~vlv~F~-----a~wC~~C~~~~p~~~~la~~ 99 (100)
.+.+.+++ .+..++|+|.|| +|||+||+++.|.|+++|++
T Consensus 8 ~~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~ 53 (229)
T 2ywm_A 8 RMQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGE 53 (229)
T ss_dssp HHHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhc
Confidence 45667777 354577777777 99999999999999999643
No 200
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.42 E-value=2.5e-07 Score=60.36 Aligned_cols=30 Identities=17% Similarity=0.528 Sum_probs=27.5
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.|+++||+||+++.|.+.++.+++
T Consensus 24 ~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~ 53 (193)
T 3hz8_A 24 GKVEVLEFFGYFCPHCAHLEPVLSKHAKSF 53 (193)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHC
Confidence 488999999999999999999999998764
No 201
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.37 E-value=2.4e-07 Score=58.04 Aligned_cols=29 Identities=17% Similarity=0.034 Sum_probs=26.4
Q ss_pred CCcEEEEEEC-CCChHHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFYA-PWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a-~wC~~C~~~~p~~~~la~~ 99 (100)
++++||.||+ +||++|+...|.+.++.++
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~ 64 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPE 64 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHH
Confidence 4799999998 9999999999999998765
No 202
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.35 E-value=1.9e-07 Score=62.12 Aligned_cols=31 Identities=16% Similarity=0.340 Sum_probs=27.5
Q ss_pred CCCcEEEEEEC-CCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYA-PWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a-~wC~~C~~~~p~~~~la~~l 100 (100)
.++++||.||+ +||++|+...|.+.++.++|
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~ 99 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEF 99 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHH
Confidence 35899999997 99999999999999998753
No 203
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.35 E-value=4.7e-07 Score=58.48 Aligned_cols=31 Identities=13% Similarity=0.345 Sum_probs=27.8
Q ss_pred CCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++|+.||++||++|+++.|.+.++.+++
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~ 54 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKL 54 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhC
Confidence 3488999999999999999999999998764
No 204
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.34 E-value=2.1e-07 Score=60.70 Aligned_cols=30 Identities=13% Similarity=0.286 Sum_probs=27.2
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.|| ++||++|+...|.+.+++++|
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~ 66 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEF 66 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHH
Confidence 589999999 999999999999999987653
No 205
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.34 E-value=2.7e-07 Score=54.21 Aligned_cols=36 Identities=17% Similarity=0.362 Sum_probs=27.5
Q ss_pred HHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 61 QALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 61 ~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
+.+++++.+. .++.|+++||++|+++.+.+++++..
T Consensus 3 ~~~~~~i~~~---~v~~f~~~~C~~C~~~~~~L~~~~~~ 38 (105)
T 1kte_A 3 AFVNSKIQPG---KVVVFIKPTCPFCRKTQELLSQLPFK 38 (105)
T ss_dssp HHHHHHCCTT---CEEEEECSSCHHHHHHHHHHHHSCBC
T ss_pred hHHHhhcccC---CEEEEEcCCCHhHHHHHHHHHHcCCC
Confidence 4566666433 36679999999999999999987643
No 206
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.33 E-value=3.8e-07 Score=57.50 Aligned_cols=30 Identities=13% Similarity=0.178 Sum_probs=26.8
Q ss_pred CCcEEEEEEC-CCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYA-PWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a-~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.||+ +||++|....|.+.++.++|
T Consensus 42 gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~ 72 (163)
T 1psq_A 42 GKKKVLSVVPSIDTGICSTQTRRFNEELAGL 72 (163)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHTTTC
T ss_pred CCEEEEEEECCCCCCccHHHHHHHHHHHHHc
Confidence 5899999995 99999999999999988764
No 207
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.33 E-value=1.5e-07 Score=60.92 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=27.2
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.|| ++||++|+...|.+.+++++|
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~ 61 (192)
T 2h01_A 31 KKYVLLYFYPLDFTFVCPSEIIALDKALDSF 61 (192)
T ss_dssp TCEEEEEECSCSSCSSCCHHHHHHHHTHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 489999999 999999999999999987653
No 208
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.31 E-value=2.7e-07 Score=61.00 Aligned_cols=29 Identities=14% Similarity=0.251 Sum_probs=26.7
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~ 99 (100)
++++||.|| |+||++|....|.+.++.++
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~ 77 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEE 77 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 589999999 99999999999999998765
No 209
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.31 E-value=4.4e-07 Score=57.54 Aligned_cols=30 Identities=10% Similarity=0.031 Sum_probs=27.1
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~l 100 (100)
+++++|.|| ++||++|....|.+.++.++|
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~ 77 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM 77 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc
Confidence 588999999 899999999999999987764
No 210
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.31 E-value=2.9e-07 Score=60.93 Aligned_cols=30 Identities=20% Similarity=0.296 Sum_probs=27.3
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.|| ++||++|+...|.+.+++++|
T Consensus 52 gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~ 82 (213)
T 2i81_A 52 KKYVLLYFYPLDFTFVCPSEIIALDKALDAF 82 (213)
T ss_dssp TCEEEEEECSCTTSSHHHHHHHHHHHTHHHH
T ss_pred CCeEEEEEEcCCCCCCCHHHHHHHHHHHHHH
Confidence 489999999 999999999999999988753
No 211
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.30 E-value=4.5e-07 Score=61.16 Aligned_cols=43 Identities=14% Similarity=0.197 Sum_probs=36.6
Q ss_pred cCCHHHHHHHHhcCCCcEEEEEECCC--ChHHhhhHHHHHHhHhh
Q psy3441 57 LPTPQALNKLLKKETRPVLIMFYAPW--CGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 57 ~~~~~~f~~~~~~~~~~vlv~F~a~w--C~~C~~~~p~~~~la~~ 99 (100)
..+.+.|.+++..-+++|+|.||++| |++|+.+.+.++++|+.
T Consensus 11 ~~~~~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~ 55 (243)
T 2hls_A 11 EDFRRELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEE 55 (243)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHh
Confidence 33456787888766689999999999 99999999999999875
No 212
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.30 E-value=2.2e-07 Score=62.03 Aligned_cols=30 Identities=17% Similarity=0.295 Sum_probs=27.1
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.|| |+||++|+...|.+.++.++|
T Consensus 56 Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~ 86 (221)
T 2c0d_A 56 QKYCCLLFYPLNYTFVCPTEIIEFNKHIKDF 86 (221)
T ss_dssp TCEEEEEECCCCTTTCCHHHHHHHHHTHHHH
T ss_pred CCeEEEEEEcCCCCCchHHHHHHHHHHHHHH
Confidence 589999999 999999999999999987653
No 213
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.29 E-value=3.1e-07 Score=58.68 Aligned_cols=28 Identities=14% Similarity=0.235 Sum_probs=26.0
Q ss_pred CCcEEEEEECCC-ChHHhhhHHHHHHhHh
Q psy3441 71 TRPVLIMFYAPW-CGFCKQLKPEFLAGRD 98 (100)
Q Consensus 71 ~~~vlv~F~a~w-C~~C~~~~p~~~~la~ 98 (100)
++++||.||++| |++|+...|.+.++.+
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~ 72 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAA 72 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHh
Confidence 589999999999 9999999999999875
No 214
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.28 E-value=8.1e-07 Score=56.44 Aligned_cols=29 Identities=17% Similarity=0.390 Sum_probs=26.4
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
++++|+.|+.+||++|+++.|.++++.++
T Consensus 22 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~ 50 (175)
T 3gyk_A 22 GDVTVVEFFDYNCPYCRRAMAEVQGLVDA 50 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHh
Confidence 47899999999999999999999998764
No 215
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.27 E-value=3.3e-07 Score=57.96 Aligned_cols=30 Identities=13% Similarity=0.267 Sum_probs=27.1
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.|| ++||++|....|.+.++.++|
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~ 73 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL 73 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc
Confidence 588999999 899999999999999988764
No 216
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.27 E-value=6e-07 Score=56.71 Aligned_cols=29 Identities=14% Similarity=0.355 Sum_probs=25.9
Q ss_pred CCcEEEEEE-CCCChHHh-hhHHHHHHhHhh
Q psy3441 71 TRPVLIMFY-APWCGFCK-QLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~-~~~p~~~~la~~ 99 (100)
++.++|.|| ++||++|. ...|.|.++.++
T Consensus 35 gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~ 65 (162)
T 1tp9_A 35 GKKVILFGVPGAFTPTCSLKHVPGFIEKAGE 65 (162)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 488999999 89999999 899999998764
No 217
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.24 E-value=3.7e-07 Score=60.64 Aligned_cols=30 Identities=13% Similarity=0.302 Sum_probs=27.3
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.|| ++||++|+...|.+.+++++|
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~ 86 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEF 86 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 489999999 999999999999999987753
No 218
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.24 E-value=6.5e-07 Score=56.06 Aligned_cols=28 Identities=14% Similarity=0.144 Sum_probs=24.7
Q ss_pred CcEEEEEE-CCCChHHhhhHHHHHHhHhh
Q psy3441 72 RPVLIMFY-APWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 72 ~~vlv~F~-a~wC~~C~~~~p~~~~la~~ 99 (100)
+.+||.|| ++||++|+...|.+.++.++
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~ 64 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQE 64 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHH
Confidence 47888987 99999999999999998765
No 219
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.23 E-value=7.8e-07 Score=56.84 Aligned_cols=29 Identities=3% Similarity=0.080 Sum_probs=24.7
Q ss_pred CCcEEEEEE-CCCChHHhh-hHHHHHHhHhh
Q psy3441 71 TRPVLIMFY-APWCGFCKQ-LKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~-~~p~~~~la~~ 99 (100)
++.++|.|| |+||++|+. ..|.|.++.++
T Consensus 31 Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~ 61 (167)
T 2wfc_A 31 GKKGVLFAVPGAFTPGSSKTHLPGYVEQAAA 61 (167)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHH
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 477888886 999999999 99999988754
No 220
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.23 E-value=6.5e-07 Score=59.19 Aligned_cols=28 Identities=21% Similarity=0.487 Sum_probs=25.4
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
++.+|+.|+++||++|+++.|.++++.+
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~~~~ 113 (211)
T 1t3b_A 86 EKHVVTVFMDITCHYCHLLHQQLKEYND 113 (211)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHH
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHh
Confidence 4789999999999999999999998764
No 221
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.22 E-value=6.4e-07 Score=57.90 Aligned_cols=29 Identities=10% Similarity=0.107 Sum_probs=26.0
Q ss_pred CCcEEEEEEC-CCChHHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFYA-PWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a-~wC~~C~~~~p~~~~la~~ 99 (100)
++++||.||+ +||++|+...|.+.++.++
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~ 59 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEE 59 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHH
Confidence 4899999995 9999999999999998764
No 222
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.21 E-value=1.6e-06 Score=53.28 Aligned_cols=37 Identities=19% Similarity=0.353 Sum_probs=28.4
Q ss_pred CHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 59 TPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 59 ~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
..+.+.+++... .++| |+++||++|+++.+.++++.-
T Consensus 16 ~~~~~~~~i~~~--~vvv-f~~~~Cp~C~~~~~~L~~~~i 52 (130)
T 2cq9_A 16 PVNQIQETISDN--CVVI-FSKTSCSYCTMAKKLFHDMNV 52 (130)
T ss_dssp HHHHHHHHHHHS--SEEE-EECSSCSHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC--cEEE-EEcCCChHHHHHHHHHHHcCC
Confidence 356677777654 3444 999999999999999998754
No 223
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.20 E-value=3.7e-07 Score=58.46 Aligned_cols=28 Identities=18% Similarity=0.422 Sum_probs=24.4
Q ss_pred CcEEEEEECCCChHHhhh-HHHHHHhHhh
Q psy3441 72 RPVLIMFYAPWCGFCKQL-KPEFLAGRDN 99 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~-~p~~~~la~~ 99 (100)
+.||+.|||+||++|+.. .|.|.++.++
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~ 73 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDK 73 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHH
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHH
Confidence 477888999999999998 9999988664
No 224
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.20 E-value=9e-07 Score=59.17 Aligned_cols=29 Identities=10% Similarity=0.249 Sum_probs=26.0
Q ss_pred CCcEEEEEE-CCCChHHh-hhHHHHHHhHhh
Q psy3441 71 TRPVLIMFY-APWCGFCK-QLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~-~~~p~~~~la~~ 99 (100)
++.+||.|| |+||++|+ ...|.|.+++++
T Consensus 33 gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~ 63 (241)
T 1nm3_A 33 NKTVIVFSLPGAFTPTCSSSHLPRYNELAPV 63 (241)
T ss_dssp TSEEEEEEESCSSCHHHHHTHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 478999999 99999999 999999998764
No 225
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.18 E-value=8.1e-07 Score=57.73 Aligned_cols=28 Identities=21% Similarity=0.494 Sum_probs=24.5
Q ss_pred CcEEEEEECCCChHHhhhHHHH---HHhHhh
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEF---LAGRDN 99 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~---~~la~~ 99 (100)
+++||.||+.||+||+++.|.+ .++.++
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~ 45 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHV 45 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTT
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHh
Confidence 6899999999999999999986 577654
No 226
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.18 E-value=1.3e-06 Score=48.87 Aligned_cols=23 Identities=13% Similarity=0.237 Sum_probs=20.4
Q ss_pred EEEEECCCChHHhhhHHHHHHhH
Q psy3441 75 LIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 75 lv~F~a~wC~~C~~~~p~~~~la 97 (100)
++.|+++||++|+++.+.++++.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~~ 25 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENRG 25 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT
T ss_pred EEEEcCCCChhHHHHHHHHHHCC
Confidence 56799999999999999998764
No 227
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.18 E-value=2.6e-06 Score=50.82 Aligned_cols=37 Identities=16% Similarity=0.585 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 60 PQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 60 ~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.+.+++++... + ++.|+++||++|+++.+.+++++-.
T Consensus 9 ~~~~~~~i~~~-~--v~vy~~~~Cp~C~~~~~~L~~~~i~ 45 (113)
T 3rhb_A 9 EESIRKTVTEN-T--VVIYSKTWCSYCTEVKTLFKRLGVQ 45 (113)
T ss_dssp HHHHHHHHHHS-S--EEEEECTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcC-C--EEEEECCCChhHHHHHHHHHHcCCC
Confidence 34555666554 3 5669999999999999999987543
No 228
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.18 E-value=8.6e-07 Score=56.47 Aligned_cols=29 Identities=14% Similarity=0.336 Sum_probs=26.1
Q ss_pred CCcEEEEEECCCCh-HHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFYAPWCG-FCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a~wC~-~C~~~~p~~~~la~~ 99 (100)
++++||.||++||+ .|....|.+.++.++
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~ 57 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPK 57 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHH
Confidence 58999999999997 799999999988764
No 229
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.17 E-value=1.1e-06 Score=56.48 Aligned_cols=30 Identities=13% Similarity=0.022 Sum_probs=26.5
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.|| ++||++|....|.+.++.++|
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~ 81 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQF 81 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHH
Confidence 578999998 999999999999999987653
No 230
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.16 E-value=2.5e-06 Score=53.67 Aligned_cols=37 Identities=19% Similarity=0.353 Sum_probs=29.3
Q ss_pred CHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 59 TPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 59 ~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
..+.+++++.+. .|+| |+++||++|+++.+.+++++-
T Consensus 38 ~~~~~~~~i~~~--~Vvv-f~~~~Cp~C~~~k~~L~~~~i 74 (146)
T 2ht9_A 38 PVNQIQETISDN--CVVI-FSKTSCSYCTMAKKLFHDMNV 74 (146)
T ss_dssp CHHHHHHHHHHC--SEEE-EECTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCC--CEEE-EECCCChhHHHHHHHHHHcCC
Confidence 456788888654 3444 999999999999999998754
No 231
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.16 E-value=7.9e-07 Score=57.69 Aligned_cols=29 Identities=14% Similarity=0.299 Sum_probs=26.7
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
++++||.|++.||+||+++.|.+.++.++
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~ 50 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQE 50 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHH
Confidence 47899999999999999999999998875
No 232
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.16 E-value=2.9e-06 Score=60.34 Aligned_cols=76 Identities=14% Similarity=0.286 Sum_probs=49.4
Q ss_pred eeEEEccCCcccc-cCCCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHh
Q psy3441 9 YVIKHYKDGEFNK-NYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCK 87 (100)
Q Consensus 9 ~ti~~~~~g~~~~-~y~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~ 87 (100)
+|+++|++|+... .|.|.++.+.|.+|+.+..++. +..+.+.++++. +.. .+.++|.||++++.++
T Consensus 84 Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~----------v~~l~~~~~l~~-l~~-~~~~~v~ff~~~~~~~- 150 (382)
T 2r2j_A 84 PTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDP----------IQEIRDLAEITT-LDR-SKRNIIGYFEQKDSDN- 150 (382)
T ss_dssp SEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCC----------CEEC--------------CCEEEEEESCSSSHH-
T ss_pred CEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCC----------ceecCCHHHHHH-hcC-CCCEEEEEECCCCChh-
Confidence 6788899998654 6999999999999999876532 344545567777 433 4788999999998765
Q ss_pred hhHHHHHHhHhh
Q psy3441 88 QLKPEFLAGRDN 99 (100)
Q Consensus 88 ~~~p~~~~la~~ 99 (100)
.+.|.++|+.
T Consensus 151 --~~~f~~~A~~ 160 (382)
T 2r2j_A 151 --YRVFERVANI 160 (382)
T ss_dssp --HHHHHHHHHH
T ss_pred --HHHHHHHHHH
Confidence 4567777654
No 233
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.15 E-value=1.8e-07 Score=58.99 Aligned_cols=30 Identities=20% Similarity=0.417 Sum_probs=19.9
Q ss_pred CCCcEEEEEE-CCCChHHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFY-APWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~ 99 (100)
.++.++|.|| ++||++|+...|.+.++.++
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~ 59 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAK 59 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGG
T ss_pred CCCeEEEEecCCCCCCccccchhhccccccc
Confidence 3588999999 99999999999988877654
No 234
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.06 E-value=1.8e-06 Score=56.59 Aligned_cols=31 Identities=13% Similarity=0.198 Sum_probs=27.5
Q ss_pred CCCcEEEEEE-CCCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFY-APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~l 100 (100)
.+++++|.|| +.||++|....|.+.++.++|
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~ 108 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL 108 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh
Confidence 3588999999 789999999999999998764
No 235
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.06 E-value=2.8e-06 Score=53.61 Aligned_cols=28 Identities=21% Similarity=0.276 Sum_probs=25.2
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHh
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~ 98 (100)
+++++|.|| +.||++|....|.+.++.+
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~ 74 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDAS 74 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSC
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhh
Confidence 588999999 8899999999999998864
No 236
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.00 E-value=4.8e-06 Score=45.57 Aligned_cols=23 Identities=17% Similarity=0.392 Sum_probs=20.4
Q ss_pred EEEEECCCChHHhhhHHHHHHhH
Q psy3441 75 LIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 75 lv~F~a~wC~~C~~~~p~~~~la 97 (100)
++.|+++||++|+++.+.++++.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~ 25 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRAG 25 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT
T ss_pred EEEEeCCCChHHHHHHHHHHHcC
Confidence 56799999999999999998764
No 237
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.00 E-value=3.2e-06 Score=57.01 Aligned_cols=31 Identities=13% Similarity=0.279 Sum_probs=27.5
Q ss_pred CCCcEEEEEEC-CCChHHhhhHHHHHHhHhhC
Q psy3441 70 ETRPVLIMFYA-PWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 70 ~~~~vlv~F~a-~wC~~C~~~~p~~~~la~~l 100 (100)
.++.+||.||+ +||++|....|.+.++.++|
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~ 107 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEF 107 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHH
Confidence 35899999999 99999999999999988753
No 238
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=97.99 E-value=7e-06 Score=52.10 Aligned_cols=31 Identities=10% Similarity=0.047 Sum_probs=24.7
Q ss_pred HHHHHHHh---cCCCcEEEEEECCCChHHhhhHH
Q psy3441 61 QALNKLLK---KETRPVLIMFYAPWCGFCKQLKP 91 (100)
Q Consensus 61 ~~f~~~~~---~~~~~vlv~F~a~wC~~C~~~~p 91 (100)
.+|++.+. ..++++||+||++||..|+.|..
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~ 62 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNR 62 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHH
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHH
Confidence 45666653 23699999999999999999954
No 239
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.98 E-value=4.7e-06 Score=54.16 Aligned_cols=28 Identities=25% Similarity=0.443 Sum_probs=22.9
Q ss_pred C-cEEEEEECCCChHHhh-hHHHHHHhHhh
Q psy3441 72 R-PVLIMFYAPWCGFCKQ-LKPEFLAGRDN 99 (100)
Q Consensus 72 ~-~vlv~F~a~wC~~C~~-~~p~~~~la~~ 99 (100)
+ .||+.||++||++|+. ..|.|.+++++
T Consensus 57 k~vvL~f~~a~wcp~C~~~e~p~l~~~~~~ 86 (184)
T 3uma_A 57 KRVVLFAVPGAFTPTCSLNHLPGYLENRDA 86 (184)
T ss_dssp SEEEEEEESCTTCHHHHHTHHHHHHHTHHH
T ss_pred CCEEEEEEcCCCCCCcCHHHHHHHHHHHHH
Confidence 5 4555667999999999 79999998765
No 240
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.96 E-value=2.3e-06 Score=51.31 Aligned_cols=26 Identities=15% Similarity=0.179 Sum_probs=22.0
Q ss_pred cEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 73 PVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 73 ~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
..++.|+++||++|+++.+.+++++.
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~ 44 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSF 44 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCB
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCC
Confidence 35777999999999999999987643
No 241
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.95 E-value=4.8e-06 Score=53.60 Aligned_cols=29 Identities=10% Similarity=0.194 Sum_probs=22.3
Q ss_pred CCcEEEEE-ECCCChHHh-hhHHHHHHhHhh
Q psy3441 71 TRPVLIMF-YAPWCGFCK-QLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F-~a~wC~~C~-~~~p~~~~la~~ 99 (100)
++.++|.| |++||++|. ...|.|.+++++
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~ 73 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEA 73 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHH
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHH
Confidence 36555544 599999999 589999988765
No 242
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.94 E-value=3.4e-07 Score=58.27 Aligned_cols=36 Identities=25% Similarity=0.538 Sum_probs=26.4
Q ss_pred HHHHHhcCCCcEEEEEE-CCCChHHhhhHHHHHHhHhh
Q psy3441 63 LNKLLKKETRPVLIMFY-APWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 63 f~~~~~~~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~ 99 (100)
+.++... ++++++.|| ++||++|....|.|.++.++
T Consensus 26 Lsd~~~~-Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~ 62 (164)
T 4gqc_A 26 LYEVLKR-GRPAVLIFFPAAFSPVCTKELCTFRDKMAQ 62 (164)
T ss_dssp HHHHHHT-SSCEEEEECSCTTCCEECSSCEESCCCGGG
T ss_pred HHHHhcC-CCEEEEEEeCCCCCCCcccchhhhhhhHHH
Confidence 3344433 488888888 99999999988877766544
No 243
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.93 E-value=6.4e-06 Score=48.45 Aligned_cols=27 Identities=26% Similarity=0.333 Sum_probs=22.6
Q ss_pred CcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
+.-++.|+++||++|+++.+.+++++-
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~i 47 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLGV 47 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHTB
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCC
Confidence 445667999999999999999998753
No 244
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.92 E-value=2.9e-05 Score=53.74 Aligned_cols=77 Identities=16% Similarity=0.247 Sum_probs=56.8
Q ss_pred eeEEEccCCc-----------------ccccCCCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCC
Q psy3441 9 YVIKHYKDGE-----------------FNKNYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKET 71 (100)
Q Consensus 9 ~ti~~~~~g~-----------------~~~~y~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~ 71 (100)
||+++|++|+ ....|.|.++.+.|.+|+.+...+ .+..+.+.+++++++...+
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~----------~v~~i~~~~~l~~~l~~~~ 162 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRS----------YVKKFVRIDTLGSLLRKSP 162 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCC----------CEEECSCGGGHHHHHTSCS
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhccc----------ccEEcCCHHHHHHHHhcCC
Confidence 6788888886 256799999999999999988552 2456667788999887655
Q ss_pred CcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.++++.|. . .....+.|..+|..|
T Consensus 163 ~~~vi~fs-~----~~~~~~~f~~~A~~~ 186 (298)
T 3ed3_A 163 KLSVVLFS-K----QDKISPVYKSIALDW 186 (298)
T ss_dssp SEEEEEEE-S----SSSCCHHHHHHHHHT
T ss_pred ceEEEEEc-C----CCcchHHHHHHHHHh
Confidence 66777663 2 234567888888754
No 245
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.92 E-value=6.4e-06 Score=52.52 Aligned_cols=30 Identities=10% Similarity=0.204 Sum_probs=25.3
Q ss_pred CCCcEEEEEECCCCh-HHhhhHHHHHHhHhh
Q psy3441 70 ETRPVLIMFYAPWCG-FCKQLKPEFLAGRDN 99 (100)
Q Consensus 70 ~~~~vlv~F~a~wC~-~C~~~~p~~~~la~~ 99 (100)
.++++||+||++||+ .|....+.+.++.+.
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~ 61 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKM 61 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHh
Confidence 359999999999996 799999988887553
No 246
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.89 E-value=4.5e-06 Score=53.80 Aligned_cols=30 Identities=20% Similarity=0.511 Sum_probs=26.8
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++++|+.||.+||++|+.+.|.+.++.+++
T Consensus 22 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~ 51 (195)
T 2znm_A 22 GKIEVLEFFGYFCVHCHHFDPLLLKLGKAL 51 (195)
T ss_dssp SSEEEEEEECTTSCCTTSSCHHHHHHHHHS
T ss_pred CCcEEEEEECCCChhHHHHhHHHHHHHHHC
Confidence 478999999999999999999999987653
No 247
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.88 E-value=7.5e-06 Score=49.52 Aligned_cols=34 Identities=12% Similarity=0.406 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCCcEEEEEECCCChHHhhh-HHHHHHhH
Q psy3441 61 QALNKLLKKETRPVLIMFYAPWCGFCKQL-KPEFLAGR 97 (100)
Q Consensus 61 ~~f~~~~~~~~~~vlv~F~a~wC~~C~~~-~p~~~~la 97 (100)
+.+++++... .++.|+++||++|+++ .+.+++++
T Consensus 16 ~~~~~~i~~~---~Vvvf~~~~Cp~C~~alk~~L~~~~ 50 (118)
T 3c1r_A 16 KHVKDLIAEN---EIFVASKTYCPYCHAALNTLFEKLK 50 (118)
T ss_dssp HHHHHHHHHS---SEEEEECSSCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHccC---cEEEEEcCCCcCHHHHHHHHHHHcC
Confidence 4556666543 2556999999999999 99988765
No 248
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.85 E-value=1.5e-05 Score=53.62 Aligned_cols=28 Identities=25% Similarity=0.552 Sum_probs=24.6
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
.+.+|+.|+.+||++|+++.+.+.++.+
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~ 124 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVD 124 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHh
Confidence 3678999999999999999999987654
No 249
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.82 E-value=5.4e-06 Score=56.47 Aligned_cols=30 Identities=13% Similarity=0.265 Sum_probs=27.0
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~l 100 (100)
++.+||.|| ++||++|....|.|.++.++|
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~ 121 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEF 121 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHH
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHH
Confidence 588999999 999999999999999987653
No 250
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.78 E-value=8.5e-06 Score=46.41 Aligned_cols=24 Identities=21% Similarity=0.542 Sum_probs=21.1
Q ss_pred EEEEEECCCChHHhhhHHHHHHhH
Q psy3441 74 VLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 74 vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
.++.|+++||++|+++.+.+++++
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~ 30 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG 30 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT
T ss_pred eEEEEECCCChhHHHHHHHHHHcC
Confidence 467799999999999999998864
No 251
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.77 E-value=2.8e-05 Score=49.86 Aligned_cols=30 Identities=10% Similarity=0.251 Sum_probs=26.4
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++.+|+.|+.+||++|..+.|.+.++.+++
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~ 54 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQ 54 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTS
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhc
Confidence 367899999999999999999999987653
No 252
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.76 E-value=3.5e-05 Score=46.14 Aligned_cols=36 Identities=22% Similarity=0.420 Sum_probs=27.6
Q ss_pred HHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 60 PQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 60 ~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
.+.+++++.+. + | +.|+++||++|+++.+.++++.-
T Consensus 7 ~~~~~~~i~~~-~-v-~vy~~~~Cp~C~~ak~~L~~~~i 42 (114)
T 3h8q_A 7 RRHLVGLIERS-R-V-VIFSKSYCPHSTRVKELFSSLGV 42 (114)
T ss_dssp HHHHHHHHHHC-S-E-EEEECTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhccC-C-E-EEEEcCCCCcHHHHHHHHHHcCC
Confidence 45677777654 3 3 34999999999999999998753
No 253
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.75 E-value=4.1e-05 Score=45.06 Aligned_cols=35 Identities=29% Similarity=0.473 Sum_probs=26.2
Q ss_pred HHHHHHHHhcCCCcEEEEEEC-----CCChHHhhhHHHHHHhH
Q psy3441 60 PQALNKLLKKETRPVLIMFYA-----PWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 60 ~~~f~~~~~~~~~~vlv~F~a-----~wC~~C~~~~p~~~~la 97 (100)
.+.+++++... .|+| |++ +||++|+++.+.++++.
T Consensus 7 ~~~~~~~i~~~--~vvv-f~~g~~~~~~C~~C~~~~~~L~~~~ 46 (105)
T 2yan_A 7 EERLKVLTNKA--SVML-FMKGNKQEAKCGFSKQILEILNSTG 46 (105)
T ss_dssp HHHHHHHHTSS--SEEE-EESBCSSSBCTTHHHHHHHHHHHHT
T ss_pred HHHHHHHhccC--CEEE-EEecCCCCCCCccHHHHHHHHHHCC
Confidence 35566676543 4554 777 99999999999998864
No 254
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.71 E-value=2.1e-05 Score=52.46 Aligned_cols=28 Identities=7% Similarity=0.014 Sum_probs=23.8
Q ss_pred cEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 73 PVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 73 ~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.||+.|||+||++|....+.+.++.++|
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f 61 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEF 61 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHH
Confidence 5666678999999999999999987653
No 255
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.70 E-value=3.7e-05 Score=45.14 Aligned_cols=27 Identities=11% Similarity=0.181 Sum_probs=22.5
Q ss_pred CcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
..-++.|+++||++|+++...++++.-
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak~~L~~~~i 41 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRALALLKRKGV 41 (99)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCC
Confidence 445666999999999999999998753
No 256
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.70 E-value=3.3e-05 Score=42.87 Aligned_cols=23 Identities=13% Similarity=0.398 Sum_probs=20.2
Q ss_pred EEEEECCCChHHhhhHHHHHHhH
Q psy3441 75 LIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 75 lv~F~a~wC~~C~~~~p~~~~la 97 (100)
++.|+++||++|+++.+.+++..
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~ 25 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSKG 25 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHT
T ss_pred EEEEECCCChhHHHHHHHHHHCC
Confidence 56799999999999999998764
No 257
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.66 E-value=3.7e-05 Score=48.67 Aligned_cols=29 Identities=17% Similarity=0.250 Sum_probs=25.2
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
++.+|+.|+..||++|+.+.|.+.++.++
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~ 55 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQ 55 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHH
Confidence 47789999999999999999988887654
No 258
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.65 E-value=2.7e-05 Score=44.43 Aligned_cols=24 Identities=17% Similarity=0.259 Sum_probs=20.9
Q ss_pred EEEEECCCChHHhhhHHHHHHhHh
Q psy3441 75 LIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 75 lv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
++.|+++||++|+++.+.++++.-
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~gi 37 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREGV 37 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHTC
T ss_pred EEEEECCCChHHHHHHHHHHHcCC
Confidence 556999999999999999998754
No 259
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.65 E-value=3.8e-05 Score=43.75 Aligned_cols=24 Identities=21% Similarity=0.512 Sum_probs=20.9
Q ss_pred EEEEEECCCChHHhhhHHHHHHhH
Q psy3441 74 VLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 74 vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
.++.|+++||++|+++.+.+++..
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~~ 30 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARKG 30 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT
T ss_pred cEEEEECCCChhHHHHHHHHHHcC
Confidence 467799999999999999998764
No 260
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.65 E-value=2.9e-05 Score=52.26 Aligned_cols=28 Identities=0% Similarity=-0.139 Sum_probs=24.8
Q ss_pred CcEEEEEE-CCCChHHhhhHHHHHHhHhh
Q psy3441 72 RPVLIMFY-APWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 72 ~~vlv~F~-a~wC~~C~~~~p~~~~la~~ 99 (100)
+.+||.|| |+||+.|....+.|.++.++
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~e 58 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGD 58 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHH
Confidence 37888898 99999999999999998765
No 261
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.64 E-value=1.7e-05 Score=54.03 Aligned_cols=29 Identities=17% Similarity=0.222 Sum_probs=24.6
Q ss_pred C-cEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 72 R-PVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 72 ~-~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
+ .||+.|||+||+.|....+.|.+++++|
T Consensus 34 K~vVL~~fpa~~CpvC~tEl~~l~~l~~ef 63 (249)
T 3a2v_A 34 KWFVLFSHPADFTPVCTTEFVSFARRYEDF 63 (249)
T ss_dssp CEEEEECCSCTTCHHHHHHHHHHHHTHHHH
T ss_pred CEEEEEEEcCCCCcChHHHHHHHHHHHHHH
Confidence 5 4667889999999999999999987653
No 262
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.60 E-value=5e-05 Score=42.66 Aligned_cols=24 Identities=17% Similarity=0.317 Sum_probs=21.0
Q ss_pred EEEEEECCCChHHhhhHHHHHHhH
Q psy3441 74 VLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 74 vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
.++.|+++||++|+++...++++.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~ 28 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENN 28 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT
T ss_pred EEEEEEcCCChhHHHHHHHHHHcC
Confidence 466799999999999999998875
No 263
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.56 E-value=2.6e-05 Score=51.86 Aligned_cols=27 Identities=11% Similarity=0.177 Sum_probs=22.7
Q ss_pred cEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 73 PVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 73 ~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.||+.|||+||+.|....+.+.++.++
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~ 60 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHED 60 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 455556899999999999999998765
No 264
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.47 E-value=8.9e-05 Score=45.51 Aligned_cols=36 Identities=17% Similarity=0.392 Sum_probs=27.7
Q ss_pred CHHHHHHHHhcCCCcEEEEEECCCChHHhhh-HHHHHHhH
Q psy3441 59 TPQALNKLLKKETRPVLIMFYAPWCGFCKQL-KPEFLAGR 97 (100)
Q Consensus 59 ~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~-~p~~~~la 97 (100)
..+.+++++... + ++.|+++||++|+++ .+.+++++
T Consensus 26 ~~~~v~~~i~~~-~--Vvvy~~~~Cp~C~~a~k~~L~~~~ 62 (129)
T 3ctg_A 26 TVAHVKDLIGQK-E--VFVAAKTYCPYCKATLSTLFQELN 62 (129)
T ss_dssp HHHHHHHHHHHS-S--EEEEECTTCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHcCC-C--EEEEECCCCCchHHHHHHHHHhcC
Confidence 345677777654 3 567999999999999 99988765
No 265
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.47 E-value=6.1e-05 Score=48.97 Aligned_cols=28 Identities=18% Similarity=0.521 Sum_probs=24.4
Q ss_pred CcEEEEEECCCChHHhhhHHHH---HHhHhh
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEF---LAGRDN 99 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~---~~la~~ 99 (100)
+++||.|+..||+||+++.|.+ .++.++
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~ 52 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKK 52 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHH
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHh
Confidence 7899999999999999999986 576654
No 266
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=97.42 E-value=0.00039 Score=42.47 Aligned_cols=44 Identities=11% Similarity=0.055 Sum_probs=36.0
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
....+.+.+++++++.+. .+++|-|+++||++| .+.|.++|+.+
T Consensus 22 ~~~~i~s~~e~e~fi~~~-~v~VVGfF~~~~~~~---~~~F~~~A~~~ 65 (124)
T 2l4c_A 22 EPTWLTDVPAAMEFIAAT-EVAVIGFFQDLEIPA---VPILHSMVQKF 65 (124)
T ss_dssp CCEECCSHHHHHHHHHTS-SEEEEEECSCTTSTH---HHHHHHHHHHC
T ss_pred cceEcCCHHHHHHHHhcC-CCEEEEEECCCCChh---HHHHHHHHHhC
Confidence 345577888999999765 889999999999999 67888888754
No 267
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=97.38 E-value=0.00024 Score=47.02 Aligned_cols=45 Identities=13% Similarity=0.105 Sum_probs=38.4
Q ss_pred CCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 52 QAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
+..+.+.+.+++++++.+. +.+||-|+++|| ..+.+.|.++|+.+
T Consensus 9 ~~~~~l~s~~~~~~~l~~~-~v~vVgff~~~~---~~~~~~f~~~A~~l 53 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIAAT-EVAVIGFFQDLE---IPAVPILHSMVQKF 53 (227)
T ss_dssp CCCEECCSHHHHHHHHHTS-SEEEEEECSCSC---STHHHHHHHHTTTC
T ss_pred CCCeeeCCHHHHHHHHhcC-CeEEEEEecCCC---chhHHHHHHHHHhC
Confidence 4568888999999988765 899999999995 68999999999864
No 268
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.0004 Score=42.61 Aligned_cols=34 Identities=18% Similarity=0.350 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHh
Q psy3441 60 PQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAG 96 (100)
Q Consensus 60 ~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l 96 (100)
.++|++++... + ++.|..+||++|+++...+++.
T Consensus 4 ~~~~~~ii~~~-~--Vvvysk~~Cp~C~~ak~lL~~~ 37 (127)
T 3l4n_A 4 QKEYSLILDLS-P--IIIFSKSTCSYSKGMKELLENE 37 (127)
T ss_dssp HHHHHHHHTSC-S--EEEEECTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccC-C--EEEEEcCCCccHHHHHHHHHHh
Confidence 35788877654 3 5669999999999999999874
No 269
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.24 E-value=0.00052 Score=46.63 Aligned_cols=73 Identities=15% Similarity=0.094 Sum_probs=53.9
Q ss_pred eeEEEccCCcc--cccC--CCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCCh
Q psy3441 9 YVIKHYKDGEF--NKNY--ERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCG 84 (100)
Q Consensus 9 ~ti~~~~~g~~--~~~y--~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~ 84 (100)
|||++|+ |.. +..| .|.++.+.|.+|+.+..+... . ... .-..++.++.. |.++||.
T Consensus 97 PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~~--~---~~g-----~i~~~d~l~~~--------f~~~~~~ 157 (248)
T 2c0g_A 97 PSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPLYI--G---RDG-----CIKEFNEVLKN--------YANIPDA 157 (248)
T ss_dssp CEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSCCC--C---CTT-----CCHHHHHHHTT--------GGGSCHH
T ss_pred CeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhcccc--C---CCC-----chHHHHHHHHH--------Hhcccch
Confidence 6888898 872 5678 899999999999998765221 0 011 22567777642 8899999
Q ss_pred HHhhhHHHHHHhHhhC
Q psy3441 85 FCKQLKPEFLAGRDNL 100 (100)
Q Consensus 85 ~C~~~~p~~~~la~~l 100 (100)
.|..+...++++++.|
T Consensus 158 ~~~~~~~~~~~~~~~l 173 (248)
T 2c0g_A 158 EQLKLIEKLQAKQEQL 173 (248)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHc
Confidence 9999999999887653
No 270
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.15 E-value=0.00036 Score=41.26 Aligned_cols=34 Identities=29% Similarity=0.488 Sum_probs=25.4
Q ss_pred HHHHHHHhcCCCcEEEEEEC-----CCChHHhhhHHHHHHhH
Q psy3441 61 QALNKLLKKETRPVLIMFYA-----PWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 61 ~~f~~~~~~~~~~vlv~F~a-----~wC~~C~~~~p~~~~la 97 (100)
+.+++++.+. .|+ .|+. +||++|+++...++++.
T Consensus 6 ~~~~~~i~~~--~vv-vy~~g~~~~~~Cp~C~~ak~~L~~~~ 44 (109)
T 1wik_A 6 SGLKVLTNKA--SVM-LFMKGNKQEAKCGFSKQILEILNSTG 44 (109)
T ss_dssp CCHHHHHTTS--SEE-EEESSTTTCCCSSTHHHHHHHHHHTC
T ss_pred HHHHHHhccC--CEE-EEEecCCCCCCCchHHHHHHHHHHcC
Confidence 4577777643 344 4666 99999999999998753
No 271
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.12 E-value=0.0005 Score=43.83 Aligned_cols=29 Identities=17% Similarity=0.341 Sum_probs=25.4
Q ss_pred CCcEEEEEECCCChHHhhhHHHH-HHhHhh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEF-LAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~-~~la~~ 99 (100)
.++++|+||..+|++|..+.+.+ .++.++
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~ 46 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEK 46 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHH
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHh
Confidence 36789999999999999999999 888764
No 272
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.07 E-value=0.00076 Score=42.43 Aligned_cols=30 Identities=23% Similarity=0.639 Sum_probs=26.6
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
++++||.|+.-.||||+++.+.+.++.+++
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~ 50 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQL 50 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhc
Confidence 478999999999999999999999887653
No 273
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=96.98 E-value=0.00051 Score=44.51 Aligned_cols=36 Identities=11% Similarity=0.289 Sum_probs=26.0
Q ss_pred HHHHHhcCCCcEEEEEECCCChHHhh-hHHHHHHhHhh
Q psy3441 63 LNKLLKKETRPVLIMFYAPWCGFCKQ-LKPEFLAGRDN 99 (100)
Q Consensus 63 f~~~~~~~~~~vlv~F~a~wC~~C~~-~~p~~~~la~~ 99 (100)
+.+++... ..||+.|++.||+.|.. ..|.|.+...+
T Consensus 41 Lsd~~~Gk-~vVL~fyP~~~tp~Ct~~El~~f~~~~~e 77 (176)
T 4f82_A 41 VRDQVAGK-RVVIFGLPGAFTPTCSAQHVPGYVEHAEQ 77 (176)
T ss_dssp HHHHHTTC-EEEEEEESCTTCHHHHHTHHHHHHHHHHH
T ss_pred HHHHhCCC-eEEEEEEcCCCCCCCCHHHHHHHHHHHHH
Confidence 44444322 35666777999999999 99999887765
No 274
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.98 E-value=0.00045 Score=40.11 Aligned_cols=24 Identities=38% Similarity=1.027 Sum_probs=20.4
Q ss_pred EEEEEECCCChHHhhhHHHHHHhH
Q psy3441 74 VLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 74 vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
-++.|.++||++|++....+++..
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~g 28 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTANR 28 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHTT
T ss_pred cEEEEcCCCCHhHHHHHHHHHhcC
Confidence 356699999999999999998754
No 275
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=96.93 E-value=0.00049 Score=43.14 Aligned_cols=26 Identities=35% Similarity=0.622 Sum_probs=23.4
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAG 96 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~l 96 (100)
++.+|+.|+-++|++|+++.+.++++
T Consensus 14 a~~~vv~f~D~~Cp~C~~~~~~l~~l 39 (147)
T 3gv1_A 14 GKLKVAVFSDPDCPFCKRLEHEFEKM 39 (147)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHTTC
T ss_pred CCEEEEEEECCCChhHHHHHHHHhhc
Confidence 48899999999999999999998764
No 276
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=96.90 E-value=0.00043 Score=46.47 Aligned_cols=26 Identities=19% Similarity=0.134 Sum_probs=21.8
Q ss_pred CCcEEEEEECCC-ChHHh-----hhHHHHHHh
Q psy3441 71 TRPVLIMFYAPW-CGFCK-----QLKPEFLAG 96 (100)
Q Consensus 71 ~~~vlv~F~a~w-C~~C~-----~~~p~~~~l 96 (100)
++.+||.||++| |+.|. ...+.|.++
T Consensus 48 Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~ 79 (224)
T 3keb_A 48 HTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS 79 (224)
T ss_dssp TCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT
T ss_pred CCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH
Confidence 488999999999 99999 777777654
No 277
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.85 E-value=0.0033 Score=41.59 Aligned_cols=24 Identities=25% Similarity=0.515 Sum_probs=20.4
Q ss_pred EEEEEECCCChHHhhhHHHHHHhH
Q psy3441 74 VLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 74 vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
.++.|+.+||+.|++....+++..
T Consensus 171 ~i~ly~~~~Cp~C~~a~~~L~~~~ 194 (241)
T 1nm3_A 171 SISIFTKPGCPFCAKAKQLLHDKG 194 (241)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHT
T ss_pred eEEEEECCCChHHHHHHHHHHHcC
Confidence 466689999999999999998764
No 278
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=96.46 E-value=0.006 Score=40.74 Aligned_cols=78 Identities=14% Similarity=0.196 Sum_probs=51.9
Q ss_pred eeEEEccCC-------cccccC-CCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcEEEEEEC
Q psy3441 9 YVIKHYKDG-------EFNKNY-ERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYA 80 (100)
Q Consensus 9 ~ti~~~~~g-------~~~~~y-~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a 80 (100)
+++++|+.+ .....| .|.++.+.|.+|++...-| .+.++ +.+|+..+ . . .+++|.|+.
T Consensus 73 p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~P----------lv~e~-t~~n~~~~-~-~-~~~~v~~~~ 138 (252)
T 2h8l_A 73 EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG----------ICPHM-TEDNKDLI-Q-G-KDLLIAYYD 138 (252)
T ss_dssp EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSC----------SSCEE-CTTTHHHH-S-S-SSEEEEEEC
T ss_pred CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccC----------Ceeec-ccccHhhh-c-C-CCeEEEEee
Confidence 577878754 233568 9999999999999988642 23444 67888875 2 2 566777775
Q ss_pred CCC-h--H-HhhhHHHHHHhHhhC
Q psy3441 81 PWC-G--F-CKQLKPEFLAGRDNL 100 (100)
Q Consensus 81 ~wC-~--~-C~~~~p~~~~la~~l 100 (100)
.-+ . . ...+...+.++|+++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~vA~~~ 162 (252)
T 2h8l_A 139 VDYEKNAKGSNYWRNRVMMVAKKF 162 (252)
T ss_dssp CBTTTBHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcchhHHHHHHHHHHHHHHc
Confidence 432 2 1 225778888888753
No 279
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=96.45 E-value=0.0097 Score=39.77 Aligned_cols=79 Identities=11% Similarity=0.137 Sum_probs=54.5
Q ss_pred eeEEEccCC-------cccccCC--CccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcEEEEEE
Q psy3441 9 YVIKHYKDG-------EFNKNYE--RKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFY 79 (100)
Q Consensus 9 ~ti~~~~~g-------~~~~~y~--g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~ 79 (100)
++|++|+.+ .....|+ |.++.+.|.+|++...-+ .+.++ +.+|+..+. . ++++++.|+
T Consensus 74 p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~P----------lv~e~-t~~n~~~~~-~-~~~l~~~~~ 140 (250)
T 3ec3_A 74 GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALP----------LVGHR-KTSNDAKRY-S-KRPLVVVYY 140 (250)
T ss_dssp SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSC----------TEEEE-CTTTHHHHS-C-SSSEEEEEE
T ss_pred CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCC----------ceeec-Cccchhhhh-c-cCccEEEEE
Confidence 477888753 2234577 579999999999988542 23444 778888766 3 477777777
Q ss_pred C-CCC----hHHhhhHHHHHHhHhhC
Q psy3441 80 A-PWC----GFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 80 a-~wC----~~C~~~~p~~~~la~~l 100 (100)
. +++ .....+...+.++|+++
T Consensus 141 ~~d~~~~~~~~~~~~~~~~~~vAk~~ 166 (250)
T 3ec3_A 141 SVDFSFDYRTATQFWRNKVLEVAKDF 166 (250)
T ss_dssp CCCCSTTTHHHHHHHHHHHHHHHTTC
T ss_pred ecccccccchhHHHHHHHHHHHHHhh
Confidence 5 343 34466889999999865
No 280
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=96.25 E-value=0.0042 Score=38.42 Aligned_cols=36 Identities=22% Similarity=0.501 Sum_probs=24.8
Q ss_pred HHHHHHHHhcCCCcEEEEEEC----CCChHHhhhHHHHHHhH
Q psy3441 60 PQALNKLLKKETRPVLIMFYA----PWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 60 ~~~f~~~~~~~~~~vlv~F~a----~wC~~C~~~~p~~~~la 97 (100)
.+.+++++... .|+|+.++ +||+.|++....++++.
T Consensus 25 ~~~v~~~i~~~--~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~g 64 (135)
T 2wci_A 25 IEKIQRQIAEN--PILLYMKGSPKLPSCGFSAQAVQALAACG 64 (135)
T ss_dssp HHHHHHHHHHC--SEEEEESBCSSSBSSHHHHHHHHHHHTTC
T ss_pred HHHHHHHhccC--CEEEEEEecCCCCCCccHHHHHHHHHHcC
Confidence 34566666543 45554444 99999999999988753
No 281
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=96.15 E-value=0.0034 Score=41.87 Aligned_cols=29 Identities=10% Similarity=0.086 Sum_probs=26.0
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~ 99 (100)
++.+|+.|| +.||+.|....+.|++...+
T Consensus 52 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~ 81 (216)
T 3sbc_A 52 GKYVVLAFIPLAFTFVSPTEIIAFSEAAKK 81 (216)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEcCCCCCcCchhhhHHHHhHHh
Confidence 588999999 99999999999999988764
No 282
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=95.48 E-value=0.015 Score=37.86 Aligned_cols=27 Identities=15% Similarity=0.229 Sum_probs=22.3
Q ss_pred CCcEEEEEECCCChHHhhhHHHH-HHhH
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEF-LAGR 97 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~-~~la 97 (100)
.+..||.|+...|++|+++.+.+ ..+.
T Consensus 29 a~vtvvef~D~~CP~C~~~~~~~~~~l~ 56 (202)
T 3gha_A 29 APVTVVEFGDYKCPSCKVFNSDIFPKIQ 56 (202)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHH
T ss_pred CCEEEEEEECCCChhHHHHHHHhhHHHH
Confidence 47889999999999999998875 4443
No 283
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=95.44 E-value=0.015 Score=40.05 Aligned_cols=27 Identities=15% Similarity=0.362 Sum_probs=23.8
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhH
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
++.+++.|+-|.||+|+++.+.+++..
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l 173 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHL 173 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHH
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHh
Confidence 478999999999999999999998543
No 284
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=95.42 E-value=0.012 Score=34.92 Aligned_cols=33 Identities=33% Similarity=0.636 Sum_probs=23.4
Q ss_pred HHHHHHhcCCCcEEEEEEC-----CCChHHhhhHHHHHHhH
Q psy3441 62 ALNKLLKKETRPVLIMFYA-----PWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 62 ~f~~~~~~~~~~vlv~F~a-----~wC~~C~~~~p~~~~la 97 (100)
..++++.+ .+|+ .|.. +||++|++....+++..
T Consensus 8 ~v~~~i~~--~~Vv-lf~kg~~~~~~Cp~C~~ak~~L~~~g 45 (111)
T 3zyw_A 8 RLKKLTHA--APCM-LFMKGTPQEPRCGFSKQMVEILHKHN 45 (111)
T ss_dssp HHHHHHTS--SSEE-EEESBCSSSBSSHHHHHHHHHHHHTT
T ss_pred HHHHHHhc--CCEE-EEEecCCCCCcchhHHHHHHHHHHcC
Confidence 34455543 3444 4777 99999999999998764
No 285
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=95.38 E-value=0.025 Score=35.77 Aligned_cols=29 Identities=24% Similarity=0.579 Sum_probs=24.1
Q ss_pred CCcEEEEEECCCChHHhhhHHHH-HHhHhh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEF-LAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~-~~la~~ 99 (100)
.+..|+.|+.+-|++|..+.+.+ ..+.++
T Consensus 11 a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~ 40 (186)
T 3bci_A 11 GKPLVVVYGDYKCPYCKELDEKVMPKLRKN 40 (186)
T ss_dssp CCCEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHHHH
Confidence 47789999999999999999998 456543
No 286
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=95.26 E-value=0.026 Score=33.18 Aligned_cols=33 Identities=27% Similarity=0.555 Sum_probs=22.5
Q ss_pred HHHHHHhcCCCcEEEEEEC-----CCChHHhhhHHHHHHhH
Q psy3441 62 ALNKLLKKETRPVLIMFYA-----PWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 62 ~f~~~~~~~~~~vlv~F~a-----~wC~~C~~~~p~~~~la 97 (100)
..++++.+ ..|+| |.. |||++|++....+++..
T Consensus 10 ~v~~~i~~--~~Vvv-y~k~t~~~p~Cp~C~~ak~~L~~~g 47 (109)
T 3ipz_A 10 TLEKLVNS--EKVVL-FMKGTRDFPMCGFSNTVVQILKNLN 47 (109)
T ss_dssp HHHHHHTS--SSEEE-EESBCSSSBSSHHHHHHHHHHHHTT
T ss_pred HHHHHHcc--CCEEE-EEecCCCCCCChhHHHHHHHHHHcC
Confidence 34445543 34444 555 59999999999998764
No 287
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=95.25 E-value=0.053 Score=36.09 Aligned_cols=44 Identities=25% Similarity=0.422 Sum_probs=33.7
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.+..+.+.+.+++++.+. ..++|-|+++|| ......|.++|..+
T Consensus 7 ~v~~l~s~~~~~~~l~~~-~v~vvgff~~~~---~~~~~~f~~~A~~l 50 (252)
T 2h8l_A 7 ASVPLRTEEEFKKFISDK-DASIVGFFDDSF---SEAHSEFLKAASNL 50 (252)
T ss_dssp CEEECCSHHHHHHHHTSS-SCEEEEEESCTT---SHHHHHHHHHHHHT
T ss_pred CceeecCHHHHHHHhhcC-CeEEEEEECCCC---ChHHHHHHHHHHhc
Confidence 467777888888888765 788999999985 45667788887654
No 288
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=95.14 E-value=0.034 Score=33.45 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=22.7
Q ss_pred HHHHHHhcCCCcEEEEEEC-----CCChHHhhhHHHHHHhH
Q psy3441 62 ALNKLLKKETRPVLIMFYA-----PWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 62 ~f~~~~~~~~~~vlv~F~a-----~wC~~C~~~~p~~~~la 97 (100)
-+++++.+ ..|+| |.. |||++|++....+.+..
T Consensus 8 ~v~~~i~~--~~Vvv-fsk~t~~~p~Cp~C~~ak~lL~~~g 45 (121)
T 3gx8_A 8 AIEDAIES--APVVL-FMKGTPEFPKCGFSRATIGLLGNQG 45 (121)
T ss_dssp HHHHHHHS--CSEEE-EESBCSSSBCTTHHHHHHHHHHHHT
T ss_pred HHHHHhcc--CCEEE-EEeccCCCCCCccHHHHHHHHHHcC
Confidence 34555554 34444 544 59999999999998864
No 289
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=95.14 E-value=0.033 Score=33.48 Aligned_cols=34 Identities=29% Similarity=0.595 Sum_probs=24.4
Q ss_pred HHHHHHHhcCCCcEEEEEEC-----CCChHHhhhHHHHHHhH
Q psy3441 61 QALNKLLKKETRPVLIMFYA-----PWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 61 ~~f~~~~~~~~~~vlv~F~a-----~wC~~C~~~~p~~~~la 97 (100)
+..++++.+. .|+| |.. |||++|++....++++.
T Consensus 11 ~~v~~~i~~~--~Vvv-fsk~t~~~p~Cp~C~~ak~lL~~~g 49 (118)
T 2wem_A 11 EQLDALVKKD--KVVV-FLKGTPEQPQCGFSNAVVQILRLHG 49 (118)
T ss_dssp HHHHHHHHHS--SEEE-EESBCSSSBSSHHHHHHHHHHHHTT
T ss_pred HHHHHHhccC--CEEE-EEecCCCCCccHHHHHHHHHHHHcC
Confidence 4566666654 4444 555 59999999999998764
No 290
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=94.68 E-value=0.055 Score=36.01 Aligned_cols=44 Identities=9% Similarity=0.107 Sum_probs=35.1
Q ss_pred CeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 53 ~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
.+..+.+.+++++++.+..+.++|-|++++| ....+.|.++|+.
T Consensus 7 ~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~ 50 (250)
T 3ec3_A 7 PSKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANT 50 (250)
T ss_dssp SSEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHH
T ss_pred CceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHh
Confidence 4577778899999887723889999999985 5678888888865
No 291
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=94.61 E-value=0.026 Score=37.49 Aligned_cols=28 Identities=11% Similarity=0.242 Sum_probs=22.8
Q ss_pred CCcEEEEEECCCChHHhhhHHHH-HHhHh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEF-LAGRD 98 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~-~~la~ 98 (100)
.+..|+.|+...|++|+++.+.+ .++.+
T Consensus 39 A~vtIvef~Dy~CP~C~~~~~~~~~~l~~ 67 (226)
T 3f4s_A 39 APILMIEYASLTCYHCSLFHRNVFPKIKE 67 (226)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 37789999999999999999864 55543
No 292
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=94.44 E-value=0.052 Score=31.03 Aligned_cols=33 Identities=30% Similarity=0.574 Sum_probs=27.3
Q ss_pred eeEEEccCCccc--ccCCCccCHHHHHHHhhCCCC
Q psy3441 9 YVIKHYKDGEFN--KNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 9 ~ti~~~~~g~~~--~~y~g~~~~~~l~~f~~~~~~ 41 (100)
||+.+|++|+.. ..|.|.++.+.|.+|+++..+
T Consensus 83 Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 83 PTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTG 117 (120)
T ss_dssp SEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSC
T ss_pred cEEEEEeCCCcCCcccccCccCHHHHHHHHHhccC
Confidence 566677888765 778999999999999998765
No 293
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=94.32 E-value=0.013 Score=39.09 Aligned_cols=29 Identities=17% Similarity=0.285 Sum_probs=25.4
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~ 99 (100)
++.+|+.|| +.||+.|......|+++..+
T Consensus 56 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~e 85 (219)
T 3tue_A 56 GKWVVLFFYPLDFTFVCPTEVIAFSDSVSR 85 (219)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHTTHHH
T ss_pred CCEEEEEEecccCCCCCchhHhhHHHHHhh
Confidence 588999999 99999999999999887654
No 294
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.25 E-value=0.032 Score=32.91 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=18.1
Q ss_pred EEEEECCCChHHh------hhHHHHHHh
Q psy3441 75 LIMFYAPWCGFCK------QLKPEFLAG 96 (100)
Q Consensus 75 lv~F~a~wC~~C~------~~~p~~~~l 96 (100)
++.|+.+||+.|+ ++...+++.
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~L~~~ 37 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRFLEAN 37 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCCcccchhHHHHHHHHHHc
Confidence 5568999999999 788887764
No 295
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=94.22 E-value=0.024 Score=34.79 Aligned_cols=57 Identities=9% Similarity=0.054 Sum_probs=28.9
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKE 70 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~ 70 (100)
||+++|++|+....+.| .+.+.|.+++++........ ....+..++..+|+.+...+
T Consensus 87 Pt~~~~~~G~~~~~~~G-~~~~~l~~~i~~~l~~~~~~----~~~~~~~l~~~~f~~~~~~~ 143 (153)
T 2wz9_A 87 PTFLFFKNSQKIDRLDG-AHAPELTKKVQRHASSGSFL----PSAKVKVDTDPNSSSVDKLA 143 (153)
T ss_dssp SEEEEEETTEEEEEEES-SCHHHHHHHHHHHSCTTSSC----SCCCCCCC------------
T ss_pred CEEEEEECCEEEEEEeC-CCHHHHHHHHHHHhccccCC----CccccccCCCCChhhHHHHH
Confidence 56777778877666767 47888999998876543221 12234455788999887654
No 296
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=94.09 E-value=0.039 Score=35.56 Aligned_cols=29 Identities=14% Similarity=0.414 Sum_probs=22.6
Q ss_pred CCcEEEEEE-CCCChHHh-hhHHHHHHhHhh
Q psy3441 71 TRPVLIMFY-APWCGFCK-QLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~-~~~p~~~~la~~ 99 (100)
++.+++.|| +.||+.|. ...+.|++...+
T Consensus 43 gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~ 73 (182)
T 1xiy_A 43 NKKILLISLPGAFTPTCSTKMIPGYEEEYDY 73 (182)
T ss_dssp TCEEEEEECSCTTCHHHHHTHHHHHHHTHHH
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 366777777 88999999 888888876654
No 297
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=94.02 E-value=0.057 Score=31.07 Aligned_cols=35 Identities=14% Similarity=0.067 Sum_probs=28.4
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKGDI 43 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~~~ 43 (100)
||+.+|++|+....+.|..+.+.|.+|+.+..++.
T Consensus 73 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 73 PTLLVLKDGEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred cEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 45555699987777889999999999999887644
No 298
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=93.99 E-value=0.036 Score=32.71 Aligned_cols=31 Identities=13% Similarity=0.153 Sum_probs=25.1
Q ss_pred eeEEEccCCccc--ccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFN--KNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~--~~y~g~~~~~~l~~f~~~~ 39 (100)
||+.+|++|+.. ..|.|.++.+.|.+|+++.
T Consensus 94 Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 94 PTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 677788887643 5799999999999999753
No 299
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=93.91 E-value=0.026 Score=32.02 Aligned_cols=31 Identities=6% Similarity=0.151 Sum_probs=26.3
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....|.|.++.+.|.+|+++.
T Consensus 80 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 80 PTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp SEEEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred cEEEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 4677789998877899999999999998753
No 300
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=93.84 E-value=0.037 Score=35.46 Aligned_cols=28 Identities=14% Similarity=0.138 Sum_probs=23.3
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
...+||.|.-..|++|+++.+.+..+-+
T Consensus 14 a~vtiv~f~D~~Cp~C~~~~~~~~~~l~ 41 (182)
T 3gn3_A 14 GPRLFEVFLEPTCPFSVKAFFKLDDLLA 41 (182)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHH
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHH
Confidence 3778999999999999999888876543
No 301
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=93.64 E-value=0.067 Score=36.79 Aligned_cols=28 Identities=14% Similarity=0.267 Sum_probs=23.6
Q ss_pred CcEEEEEECCCChHHhhhHHHHHHhHhh
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~~~la~~ 99 (100)
...+..|++++|++|.+....+.+++.+
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~ 70 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQK 70 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhcc
Confidence 3577779999999999999999988643
No 302
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=93.54 E-value=0.067 Score=30.99 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=25.2
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||+++|++|+....+.|.++.+.|.+|+++
T Consensus 89 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~k 118 (118)
T 1zma_A 89 PGFVHITDGQINVRCDSSMSAQEIKDFAGL 118 (118)
T ss_dssp CEEEEEETTEEEEECCTTCCHHHHHHHHTC
T ss_pred CeEEEEECCEEEEEecCCCCHHHHHHHhhC
Confidence 577778899877778999999999999864
No 303
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=93.18 E-value=0.056 Score=36.33 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=28.0
Q ss_pred eeEEEccCCc--ccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGE--FNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~--~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
|||++|++|. .+..|.|.++.+.|.+|+.+..
T Consensus 85 PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 85 PVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp SEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 6888999997 4678999999999999999874
No 304
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.10 E-value=0.081 Score=34.00 Aligned_cols=31 Identities=6% Similarity=0.044 Sum_probs=24.4
Q ss_pred HHHHHHHhcC-------CCcEEEEEECCCChHHhhhHH
Q psy3441 61 QALNKLLKKE-------TRPVLIMFYAPWCGFCKQLKP 91 (100)
Q Consensus 61 ~~f~~~~~~~-------~~~vlv~F~a~wC~~C~~~~p 91 (100)
.+|++.+... .|.++|+++++||..|..|..
T Consensus 38 gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~ 75 (178)
T 2ec4_A 38 GSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCS 75 (178)
T ss_dssp SCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHH
T ss_pred CCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHH
Confidence 4566665433 599999999999999998863
No 305
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.09 E-value=0.11 Score=38.70 Aligned_cols=34 Identities=26% Similarity=0.536 Sum_probs=26.6
Q ss_pred HHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhH
Q psy3441 61 QALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 61 ~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
+.+++++... + ++.|..+||+.|+++...+++..
T Consensus 9 ~~v~~~i~~~-~--v~vy~~~~Cp~C~~~k~~L~~~~ 42 (598)
T 2x8g_A 9 QWLRKTVDSA-A--VILFSKTTCPYCKKVKDVLAEAK 42 (598)
T ss_dssp HHHHHHHHHC-S--EEEEECTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHhccC-C--EEEEECCCChhHHHHHHHHHHCC
Confidence 5677777553 2 45599999999999999998764
No 306
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=93.02 E-value=0.14 Score=33.41 Aligned_cols=26 Identities=19% Similarity=0.324 Sum_probs=21.6
Q ss_pred CCcEEEEEECCCChHHhhhHHHHHHh
Q psy3441 71 TRPVLIMFYAPWCGFCKQLKPEFLAG 96 (100)
Q Consensus 71 ~~~vlv~F~a~wC~~C~~~~p~~~~l 96 (100)
.+.+||.|.-.-|++|+++.+.+...
T Consensus 15 a~vtivef~D~~Cp~C~~~~~~~~~~ 40 (205)
T 3gmf_A 15 AKLRLVEFVSYTCPHCSHFEIESEGQ 40 (205)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHH
Confidence 37789999999999999999766443
No 307
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=92.80 E-value=0.11 Score=29.95 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=26.0
Q ss_pred eeEEEccCCcc--cccCCCccCHHHHHHHhhCCCC
Q psy3441 9 YVIKHYKDGEF--NKNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 9 ~ti~~~~~g~~--~~~y~g~~~~~~l~~f~~~~~~ 41 (100)
||+++|.+|+. ...|.|.++.+.|.+|+.+...
T Consensus 83 Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 83 PTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp SEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred CeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccC
Confidence 56677777754 6779999999999999987643
No 308
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=92.71 E-value=0.096 Score=36.51 Aligned_cols=25 Identities=12% Similarity=0.175 Sum_probs=21.6
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHH
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLA 95 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~ 95 (100)
++.||+.|| +.||+.|....+.|.+
T Consensus 24 Gk~vvl~F~p~~~tp~C~~e~~~~~~ 49 (322)
T 4eo3_A 24 GKYTILFFFPKAGTSGSTREAVEFSR 49 (322)
T ss_dssp TSEEEEEECSSTTSHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHH
Confidence 588999999 6799999998888865
No 309
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=92.52 E-value=0.11 Score=30.85 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=26.6
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKGD 42 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~~ 42 (100)
+|+++|++|+ ...|.|.++.+.|.+|+++...+
T Consensus 93 Pt~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~~~ 125 (140)
T 2dj1_A 93 PTIKILKKGQ-AVDYDGSRTQEEIVAKVREVSQP 125 (140)
T ss_dssp SEEEEEETTE-EEECCSCCCHHHHHHHHHHHHSS
T ss_pred CeEEEEECCc-EEEcCCCCCHHHHHHHHHHhcCC
Confidence 5666678888 67799999999999999876543
No 310
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=92.49 E-value=0.096 Score=30.85 Aligned_cols=30 Identities=10% Similarity=0.113 Sum_probs=25.1
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||++++++|+....+.|.++.+.|.+++++
T Consensus 98 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 98 PTIILLKNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp SEEEEEETTEEEEEESSCCCHHHHHHHHTT
T ss_pred CEEEEEECCEEEEEecCCCCHHHHHHHHHh
Confidence 556666899887788999999999999875
No 311
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=92.29 E-value=0.094 Score=29.34 Aligned_cols=31 Identities=13% Similarity=0.130 Sum_probs=26.0
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+.+|++|+....+.|.++.+.+.+++++.
T Consensus 75 Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 75 PTLIVFKDGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred CEEEEEeCCeEEEEEeCCCCHHHHHHHHHHh
Confidence 5777788998777788999999999998764
No 312
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=92.10 E-value=0.097 Score=29.62 Aligned_cols=31 Identities=6% Similarity=-0.055 Sum_probs=26.2
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....+.|.++.+.|.+++++.
T Consensus 73 Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 73 PTVLLFYNGKEILRESRFISLENLERTIQLF 103 (105)
T ss_dssp CEEEEEETTEEEEEEESSCCHHHHHHHHHTT
T ss_pred CEEEEEeCCeEEEEEeCCcCHHHHHHHHHHh
Confidence 6777788998777788999999999999865
No 313
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=92.10 E-value=0.11 Score=30.69 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=25.6
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....+.|.++.+.+.+++++.
T Consensus 91 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 91 PTLLLFKNGEVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp SEEEEEESSSEEEEEESCCCHHHHHHHHTTT
T ss_pred CEEEEEECCEEEEEEeCCCCHHHHHHHHHHH
Confidence 5666669998777788999999999999865
No 314
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=91.89 E-value=0.11 Score=29.79 Aligned_cols=33 Identities=9% Similarity=0.111 Sum_probs=26.4
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~ 41 (100)
||+++|++|+....+.|..+.+.|.+++....+
T Consensus 74 Pt~~~~~~G~~v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 74 PTLVFIRDGKVAKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp CEEEEEESSSEEEEEESCCCHHHHHHHHHTC--
T ss_pred CEEEEEECCEEEEEEcCCCCHHHHHHHHHHHhh
Confidence 566667999887778899999999999998754
No 315
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=91.80 E-value=0.06 Score=31.26 Aligned_cols=30 Identities=7% Similarity=0.139 Sum_probs=24.6
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....+.| ++.+.|.+++++.
T Consensus 75 PT~~~~~~G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 75 PTFLFMKNGQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp SEEEEEETTEEEEEEES-CCHHHHHHHHHHH
T ss_pred cEEEEEECCEEEEEEeC-cCHHHHHHHHHhc
Confidence 58888999987777877 5889999998753
No 316
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=91.71 E-value=0.11 Score=31.81 Aligned_cols=33 Identities=6% Similarity=0.155 Sum_probs=24.0
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~ 41 (100)
||+++|++|+....+.|.++.+.|.+++++...
T Consensus 93 PT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~ 125 (142)
T 2es7_A 93 PATLVFTDGKLRGALSGIHPWAELLTLMRSIVD 125 (142)
T ss_dssp SEEEEESCC----CEESCCCHHHHHHHHHHHHC
T ss_pred CeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 566667999887788999999999999987654
No 317
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=91.54 E-value=0.11 Score=29.39 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=25.8
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+.+|++|+....+.|.++.+.+.+++++.
T Consensus 78 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 78 PQILYFKDGEYKGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp CEEEEEETTEEEEEEESSCCHHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeccCCHHHHHHHHHHH
Confidence 5777779998777788999999999998754
No 318
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=91.49 E-value=0.11 Score=31.17 Aligned_cols=32 Identities=9% Similarity=-0.105 Sum_probs=28.0
Q ss_pred CeeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 8 PYVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 8 p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
+|||++|++|+......|....+.|..++++.
T Consensus 77 ~PT~i~f~~G~ev~Ri~G~~~~~~f~~~L~~~ 108 (116)
T 3dml_A 77 TPTFVLMAGDVESGRLEGYPGEDFFWPMLARL 108 (116)
T ss_dssp SSEEEEEETTEEEEEEECCCCHHHHHHHHHHH
T ss_pred CCEEEEEECCEEEeeecCCCCHHHHHHHHHHH
Confidence 68999999998877888999999999988754
No 319
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=91.49 E-value=0.084 Score=33.70 Aligned_cols=29 Identities=17% Similarity=0.219 Sum_probs=23.4
Q ss_pred CCcEEEEEE-CCCChHHhhhHHHHHHhHhh
Q psy3441 71 TRPVLIMFY-APWCGFCKQLKPEFLAGRDN 99 (100)
Q Consensus 71 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~ 99 (100)
++.+++.|| +.||+.|....+.|.+...+
T Consensus 42 gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~e 71 (171)
T 2xhf_A 42 GRKGILFSVVGAFVPGSNNHIPEYLSLYDK 71 (171)
T ss_dssp TSEEEEEECSCTTCTTTTSSHHHHHHTHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHH
Confidence 366777777 78999999999998887654
No 320
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=91.40 E-value=0.13 Score=28.68 Aligned_cols=33 Identities=9% Similarity=0.066 Sum_probs=26.2
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~ 41 (100)
||+.+|++|+....+.|..+.+.+.+++.+..+
T Consensus 74 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 74 PTVILFKDGQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred CEEEEEeCCcEeeeEeCCCCHHHHHHHHHHHhh
Confidence 566667899876778899999999999987643
No 321
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=91.18 E-value=0.14 Score=30.79 Aligned_cols=33 Identities=18% Similarity=0.299 Sum_probs=27.5
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~ 41 (100)
+|+++|++|+....|.|.++.+.|.+|+++...
T Consensus 111 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 111 PTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp SEEEEEETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred CEEEEEECCeEEEEEeCCCCHHHHHHHHHHHhc
Confidence 567778999887789999999999999987543
No 322
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=91.15 E-value=0.1 Score=29.23 Aligned_cols=31 Identities=10% Similarity=0.096 Sum_probs=24.8
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+.+|++|+....+.|.++.+.+.+++++.
T Consensus 76 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 76 PTLMLVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred CEEEEEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 5666669998777788999999999998753
No 323
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.84 E-value=0.23 Score=28.86 Aligned_cols=32 Identities=38% Similarity=0.587 Sum_probs=26.0
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~ 41 (100)
||+++|++|+ +..|.|.++.+.|.+|+.+...
T Consensus 79 Pt~~~~~~G~-~~~~~G~~~~~~l~~~l~~~~~ 110 (126)
T 1x5e_A 79 PTIYHCKDGE-FRRYQGPRTKKDFINFISDKEW 110 (126)
T ss_dssp SEEEEEETTE-EEECCSCCCHHHHHHHHHTCGG
T ss_pred CEEEEEeCCe-EEEeecCCCHHHHHHHHHHHhh
Confidence 4566668887 4779999999999999998753
No 324
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=90.81 E-value=0.1 Score=28.93 Aligned_cols=17 Identities=24% Similarity=0.454 Sum_probs=14.7
Q ss_pred CCChHHhhhHHHHHHhH
Q psy3441 81 PWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 81 ~wC~~C~~~~p~~~~la 97 (100)
+||++|++....+++..
T Consensus 12 ~~Cp~C~~ak~~L~~~g 28 (87)
T 1aba_A 12 HKCGPCDNAKRLLTVKK 28 (87)
T ss_dssp SCCHHHHHHHHHHHHTT
T ss_pred CcCccHHHHHHHHHHcC
Confidence 59999999999998753
No 325
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=90.78 E-value=0.16 Score=29.16 Aligned_cols=32 Identities=22% Similarity=0.188 Sum_probs=26.7
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
||+++|++|+....+.|..+.+.+.+++.+..
T Consensus 86 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l 117 (121)
T 2i1u_A 86 PTLILFKDGQPVKRIVGAKGKAALLRELSDVV 117 (121)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHTCSCC
T ss_pred CEEEEEECCEEEEEecCCCCHHHHHHHHHHHH
Confidence 56777889987777889999999999998764
No 326
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=90.51 E-value=0.82 Score=29.85 Aligned_cols=80 Identities=6% Similarity=-0.010 Sum_probs=45.5
Q ss_pred eeEEEccCCcc-----cccCCCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhc-CCCcEEEEEECCC
Q psy3441 9 YVIKHYKDGEF-----NKNYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKK-ETRPVLIMFYAPW 82 (100)
Q Consensus 9 ~ti~~~~~g~~-----~~~y~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~-~~~~vlv~F~a~w 82 (100)
||+++|.+|+. ...+.| ++.+.|.+++.+....... ..+.....+...+.++++.++.. ..+.+.+.|...-
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~-~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~ 168 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHD-TWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGG 168 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTT-SCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTT
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccc-cCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECC
Confidence 57777877533 225666 6999998888765432211 11111122333466788877654 3466777777766
Q ss_pred ChHHhhhH
Q psy3441 83 CGFCKQLK 90 (100)
Q Consensus 83 C~~C~~~~ 90 (100)
|..++.+.
T Consensus 169 ~~~~~~~~ 176 (244)
T 3q6o_A 169 SYLAREVA 176 (244)
T ss_dssp CCHHHHHH
T ss_pred cchHHHHH
Confidence 65444443
No 327
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=90.44 E-value=0.16 Score=28.01 Aligned_cols=31 Identities=16% Similarity=0.077 Sum_probs=25.1
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+.+|++|+....+.|..+.+.+.+++++.
T Consensus 71 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 71 PTVIFFKDGEPVDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp CEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEECCeEhhhccCCCCHHHHHHHHHHH
Confidence 5666679998777788999999999998754
No 328
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=90.37 E-value=0.19 Score=28.08 Aligned_cols=31 Identities=16% Similarity=0.078 Sum_probs=24.7
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+.++++|+....+.|..+.+.+.+++.+.
T Consensus 73 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 73 PTLILFKGGRPVKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHTTTT
T ss_pred cEEEEEeCCeEEEEEecCCCHHHHHHHHHHH
Confidence 4566668998766788999999999998764
No 329
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=90.36 E-value=0.16 Score=28.41 Aligned_cols=31 Identities=3% Similarity=0.001 Sum_probs=25.1
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+.+|++|+....+.|.++.+.|.+++++.
T Consensus 77 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 77 PTTLIFVNGQLVDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEcCCcEEEeeeccCCHHHHHHHHHHH
Confidence 5666669998777788999999999998753
No 330
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.28 E-value=0.2 Score=29.23 Aligned_cols=32 Identities=28% Similarity=0.263 Sum_probs=26.5
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
||+++|.+|+....|.|.++.+.|.+|+.+..
T Consensus 85 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 85 PTIKIFQKGESPVDYDGGRTRSDIVSRALDLF 116 (133)
T ss_dssp SEEEEEETTEEEEEECSCCSHHHHHHHHHHHH
T ss_pred CeEEEEeCCCceEEecCCCCHHHHHHHHHHHh
Confidence 56777888887778999999999999998754
No 331
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=90.07 E-value=0.17 Score=30.36 Aligned_cols=32 Identities=16% Similarity=0.008 Sum_probs=27.1
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
||+++|++|+....|.|.++.+.|.+++++..
T Consensus 80 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 111 (140)
T 3hz4_A 80 PTFKFFCHGRPVWEQVGQIYPSILKNAVRDML 111 (140)
T ss_dssp SEEEEEETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred CEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 47888899988778899999999999997654
No 332
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=89.63 E-value=0.2 Score=28.13 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=24.3
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||+++|++|+....+.|.++.+.+.+++++
T Consensus 76 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 105 (108)
T 2trx_A 76 PTLLLFKNGEVAATKVGALSKGQLKEFLDA 105 (108)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHH
T ss_pred CEEEEEeCCEEEEEEecCCCHHHHHHHHHH
Confidence 566667899876778899999999998865
No 333
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=89.43 E-value=0.2 Score=31.08 Aligned_cols=32 Identities=6% Similarity=0.174 Sum_probs=27.8
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
+|+++|++|+......|..+.+.+.+++++..
T Consensus 93 PTlilFk~G~~v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 93 PATLVFTGGNYRGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEecCCCHHHHHHHHHHHh
Confidence 68999999998888889999999999987654
No 334
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=89.39 E-value=0.27 Score=35.14 Aligned_cols=22 Identities=9% Similarity=0.197 Sum_probs=16.8
Q ss_pred EEEEECCCChHHhhhHH-HHHHh
Q psy3441 75 LIMFYAPWCGFCKQLKP-EFLAG 96 (100)
Q Consensus 75 lv~F~a~wC~~C~~~~p-~~~~l 96 (100)
++.|..+||+.|++... .++++
T Consensus 263 VvVYsk~~CPyC~~Ak~~LL~~~ 285 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNTLFEKL 285 (362)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTT
T ss_pred EEEEEcCCCcchHHHHHHHHHHc
Confidence 44589999999999876 55543
No 335
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=89.11 E-value=0.23 Score=28.10 Aligned_cols=31 Identities=13% Similarity=0.157 Sum_probs=24.8
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+.+|++|+....+.|.++.+.+.+++++.
T Consensus 81 Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 81 PALRLVKGEQILDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred eEEEEEcCCEEEEEecCCCCHHHHHHHHHHH
Confidence 4566669998777788999999999998754
No 336
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=88.87 E-value=0.23 Score=30.67 Aligned_cols=32 Identities=3% Similarity=-0.098 Sum_probs=27.7
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
+|+++|++|+......|..+.+.+.+++++..
T Consensus 91 PTlilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 91 PSLAVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp SEEEEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 78999999998888889999999999887654
No 337
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=88.66 E-value=0.61 Score=27.98 Aligned_cols=36 Identities=28% Similarity=0.580 Sum_probs=25.6
Q ss_pred CHHHHHHHHhcCCCcEEEEEE-----CCCChHHhhhHHHHHHhH
Q psy3441 59 TPQALNKLLKKETRPVLIMFY-----APWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 59 ~~~~f~~~~~~~~~~vlv~F~-----a~wC~~C~~~~p~~~~la 97 (100)
+.+..++++.+. +|+| |. +|.|+.|++....+....
T Consensus 9 ~~e~i~~~i~~~--~Vvv-F~Kgt~~~P~C~fc~~ak~lL~~~g 49 (118)
T 2wul_A 9 SAEQLDALVKKD--KVVV-FLKGTPEQPQCGFSNAVVQILRLHG 49 (118)
T ss_dssp CHHHHHHHHHHS--SEEE-EESBCSSSBSSHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHhcC--CEEE-EEcCCCCCCCCHHHHHHHHHHHHhC
Confidence 456677888764 4444 54 368999999999887753
No 338
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=88.64 E-value=0.44 Score=27.67 Aligned_cols=32 Identities=19% Similarity=0.168 Sum_probs=25.2
Q ss_pred eeEEEccCCcc-cccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEF-NKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~-~~~y~g~~~~~~l~~f~~~~~ 40 (100)
||+++|.+|+. ...|.|.++.+.+.+|+.+..
T Consensus 91 Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 91 PTIKIFGANKNKPEDYQGGRTGEAIVDAALSAL 123 (130)
T ss_dssp SEEEEESSCTTSCEECCSCCSHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHH
Confidence 56777777765 677999999999999987653
No 339
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=88.48 E-value=0.26 Score=29.35 Aligned_cols=31 Identities=6% Similarity=0.045 Sum_probs=25.6
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....|.|..+.+.+.+|+.+.
T Consensus 106 Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 106 PTLVLFRRGAPVATWVGASPRRVLEERLRPY 136 (140)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEeCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 5777779998777788999999999998764
No 340
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=88.44 E-value=0.32 Score=27.17 Aligned_cols=31 Identities=13% Similarity=0.077 Sum_probs=24.7
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+.++++|+....+.|..+.+.+.+++++.
T Consensus 75 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 75 PTIMVFKGGKKCETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp CEEEEESSSSEEEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEeCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 5677778998767788999999999888653
No 341
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=88.39 E-value=0.26 Score=30.30 Aligned_cols=32 Identities=13% Similarity=0.149 Sum_probs=26.2
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
||+++|++|+....+.|..+.+.|.+|+++..
T Consensus 120 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 151 (155)
T 2ppt_A 120 PAFILFHKGRELARAAGARPASELVGFVRGKL 151 (155)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CEEEEEeCCeEEEEecCCCCHHHHHHHHHHHh
Confidence 56677799987777889999999999998653
No 342
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=88.31 E-value=0.2 Score=27.95 Aligned_cols=29 Identities=7% Similarity=0.198 Sum_probs=23.7
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||+.+|++|+....+.|. +.+.+.+++++
T Consensus 75 Pt~~~~~~g~~~~~~~g~-~~~~l~~~l~~ 103 (105)
T 3m9j_A 75 PTFQFFKKGQKVGEFSGA-NKEKLEATINE 103 (105)
T ss_dssp SEEEEEETTEEEEEEESS-CHHHHHHHHHH
T ss_pred cEEEEEECCeEEEEEeCC-CHHHHHHHHHH
Confidence 567777999877778888 99999998864
No 343
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=88.17 E-value=0.26 Score=27.84 Aligned_cols=31 Identities=26% Similarity=0.292 Sum_probs=25.1
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....+.|..+.+.+.+++++.
T Consensus 79 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 79 PTLNVYQGGEVAKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHTHHH
T ss_pred cEEEEEeCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 5677789998777788999999999988653
No 344
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=88.14 E-value=0.28 Score=28.34 Aligned_cols=31 Identities=16% Similarity=0.246 Sum_probs=24.6
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....+.|.++.+.|.+++++.
T Consensus 87 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 87 PTVLAMKNGDVVDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred cEEEEEeCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4666678998767788999999999998653
No 345
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=88.01 E-value=0.34 Score=27.60 Aligned_cols=30 Identities=20% Similarity=0.196 Sum_probs=24.6
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||++++++|+....+.|. +.+.|.+++++.
T Consensus 81 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 81 PTFKVYKNGSSVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp SEEEEEETTEEEEEEESC-CHHHHHHHHHTT
T ss_pred cEEEEEECCcEEEEEeCC-CHHHHHHHHHHh
Confidence 467888999876678888 999999998764
No 346
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=87.96 E-value=0.47 Score=30.33 Aligned_cols=32 Identities=13% Similarity=0.209 Sum_probs=27.1
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
||+++|++|+....|.|.++.+.|.+|+.+..
T Consensus 170 Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l 201 (210)
T 3apq_A 170 PSLFIFRSGMAAVKYNGDRSKESLVAFAMQHV 201 (210)
T ss_dssp SEEEEECTTSCCEECCSCCCHHHHHHHHHHHH
T ss_pred CeEEEEECCCceeEecCCCCHHHHHHHHHHhC
Confidence 47777799987788999999999999998764
No 347
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=87.68 E-value=0.26 Score=28.50 Aligned_cols=29 Identities=7% Similarity=0.198 Sum_probs=23.8
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||+++|++|+....+.|. +.+.|.+++++
T Consensus 86 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~ 114 (116)
T 3qfa_C 86 PTFQFFKKGQKVGEFSGA-NKEKLEATINE 114 (116)
T ss_dssp SEEEEESSSSEEEEEESC-CHHHHHHHHHH
T ss_pred cEEEEEeCCeEEEEEcCC-CHHHHHHHHHH
Confidence 567777999877778888 99999998864
No 348
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=87.50 E-value=0.32 Score=28.71 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=24.2
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||+++|++|+....+.|.++.+.|.+++++
T Consensus 96 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 125 (128)
T 2o8v_B 96 PTLLLFKNGEVAATKVGALSKGQLKEFLDA 125 (128)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHH
T ss_pred CEEEEEeCCEEEEEEcCCCCHHHHHHHHHH
Confidence 466666999877778899999999999865
No 349
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=87.23 E-value=0.28 Score=27.25 Aligned_cols=29 Identities=10% Similarity=0.175 Sum_probs=23.3
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||+.++++|+....+.| .+.+.+.+++++
T Consensus 76 Pt~~~~~~G~~~~~~~g-~~~~~l~~~i~~ 104 (106)
T 1xwb_A 76 PTFVFLKNGVKVEEFAG-ANAKRLEDVIKA 104 (106)
T ss_dssp SEEEEEETTEEEEEEES-CCHHHHHHHHHH
T ss_pred cEEEEEcCCcEEEEEcC-CCHHHHHHHHHH
Confidence 56788899987777878 688889998865
No 350
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=87.10 E-value=0.3 Score=27.10 Aligned_cols=30 Identities=13% Similarity=0.208 Sum_probs=24.3
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||++++++|+....+.|..+.+.+.+++++
T Consensus 74 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~ 103 (105)
T 1fb6_A 74 PTVLFFKNGERKESIIGAVPKSTLTDSIEK 103 (105)
T ss_dssp SEEEEEETTEEEEEEEECCCHHHHHHHHHH
T ss_pred cEEEEEeCCeEEEEEecCCCHHHHHHHHHh
Confidence 567778999877778899999999988864
No 351
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=86.81 E-value=0.4 Score=28.44 Aligned_cols=34 Identities=9% Similarity=-0.040 Sum_probs=25.7
Q ss_pred eeEEEc-cCCcccccCCCccCHHHHHHHhhCCCCCC
Q psy3441 9 YVIKHY-KDGEFNKNYERKETVSAFVNFLKDPKGDI 43 (100)
Q Consensus 9 ~ti~~~-~~g~~~~~y~g~~~~~~l~~f~~~~~~~~ 43 (100)
||+++| ++|+.. .+.|.++.+.|.+++++.....
T Consensus 94 Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 94 PSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp CEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTSC
T ss_pred CEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhcc
Confidence 556666 788754 6789999999999998765433
No 352
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=86.46 E-value=0.14 Score=28.46 Aligned_cols=30 Identities=10% Similarity=0.162 Sum_probs=22.9
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||+.+|++|+....+.|..+.+.+.+++++
T Consensus 75 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~ 104 (106)
T 2yj7_A 75 PTLLLFKNGQVVDRLVGAQPKEALKERIDK 104 (106)
Confidence 566666888777778888888888888764
No 353
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=86.29 E-value=0.76 Score=26.55 Aligned_cols=36 Identities=6% Similarity=-0.154 Sum_probs=26.9
Q ss_pred eeEEEcc-CCcccccCCCccCHHHHHHHhhCCCCCCC
Q psy3441 9 YVIKHYK-DGEFNKNYERKETVSAFVNFLKDPKGDIP 44 (100)
Q Consensus 9 ~ti~~~~-~g~~~~~y~g~~~~~~l~~f~~~~~~~~~ 44 (100)
+|++++. +|+....+.|..+.+.|.+++++...+.+
T Consensus 84 Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~~ 120 (126)
T 2l57_A 84 PTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVKEG 120 (126)
T ss_dssp SEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCCCC
T ss_pred eEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhcccc
Confidence 4455555 88876678899999999999988765443
No 354
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=86.01 E-value=0.32 Score=26.90 Aligned_cols=29 Identities=10% Similarity=0.130 Sum_probs=23.0
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||++++++|+....+.| .+.+.+.+++++
T Consensus 74 Pt~~~~~~g~~~~~~~G-~~~~~l~~~l~~ 102 (104)
T 2vim_A 74 PTFVFIKDGKEVDRFSG-ANETKLRETITR 102 (104)
T ss_dssp SEEEEEETTEEEEEEES-SCHHHHHHHHHH
T ss_pred cEEEEEeCCcEEEEEeC-CCHHHHHHHHHh
Confidence 56788889987667778 688999998864
No 355
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=85.16 E-value=0.49 Score=26.58 Aligned_cols=30 Identities=13% Similarity=0.175 Sum_probs=23.7
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||++++++|+....+.|. +.+.+.+++++.
T Consensus 80 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 80 PTFHVYKDGVKADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp SEEEEEETTEEEEEEESC-CHHHHHHHHHHH
T ss_pred cEEEEEECCeEEEEEcCC-CHHHHHHHHHHH
Confidence 567778999876677787 889999988753
No 356
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=84.68 E-value=0.63 Score=27.57 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=28.0
Q ss_pred CeeEEEccCCcccccCCCccCHHHHHHHhhCCCC
Q psy3441 8 PYVIKHYKDGEFNKNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 8 p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~ 41 (100)
| |+++|++|+....+.|..+.+.+..++++...
T Consensus 94 P-t~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~ 126 (135)
T 3emx_A 94 P-TLVFYKEGRIVDKLVGATPWSLKVEKAREIYG 126 (135)
T ss_dssp S-EEEEEETTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred C-eEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 5 88889999877788899999999999987754
No 357
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=84.62 E-value=1.4 Score=32.62 Aligned_cols=73 Identities=8% Similarity=0.005 Sum_probs=42.6
Q ss_pred eeEEEccC----CcccccCCCccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcC-CCcEEEEEECCC
Q psy3441 9 YVIKHYKD----GEFNKNYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKE-TRPVLIMFYAPW 82 (100)
Q Consensus 9 ~ti~~~~~----g~~~~~y~g~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~-~~~vlv~F~a~w 82 (100)
+|+++|.+ |.....+.|.++.+.+.+++.+....... ..+.....+...+.++++.++... .+.+++.|...-
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~-~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~ 168 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRD-TWPPACPPLEPAKLNDIDGFFTRNKADYLALVFERED 168 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCS-CCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTT
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccc-cCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCc
Confidence 56777774 33334466779999999998765432221 111111123334667887777553 466777777543
No 358
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=83.81 E-value=0.63 Score=30.10 Aligned_cols=33 Identities=15% Similarity=0.184 Sum_probs=28.1
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~ 41 (100)
||+++|++|+....+.|.++.+.+.+|+++...
T Consensus 86 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 118 (222)
T 3dxb_A 86 PTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 118 (222)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred CEEEEEECCeEEEEeccccChHHHHHHHHhhcc
Confidence 577888999877788899999999999987654
No 359
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=83.42 E-value=0.67 Score=26.65 Aligned_cols=29 Identities=21% Similarity=0.117 Sum_probs=22.9
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||++++++|+....+.|.. .+.|.+++++
T Consensus 85 Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 85 PTFVLGKDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHT
T ss_pred cEEEEEeCCeEEEEEeCCC-HHHHHHHHHh
Confidence 5667789998767788887 8889998864
No 360
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=82.93 E-value=2 Score=27.24 Aligned_cols=27 Identities=30% Similarity=0.613 Sum_probs=22.7
Q ss_pred CcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
...|+.|+-.-|+.|....+.++++++
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~ 33 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQ 33 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHh
Confidence 356777889999999999999988865
No 361
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=82.80 E-value=0.7 Score=26.72 Aligned_cols=30 Identities=10% Similarity=0.069 Sum_probs=23.6
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....+.|. +.+.|.+++++.
T Consensus 90 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 90 PTFVFFKNGQKIDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp SEEEEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred cEEEEEECCeEEeeEcCC-CHHHHHHHHHHh
Confidence 567778899876677788 899999988653
No 362
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=82.49 E-value=0.8 Score=26.96 Aligned_cols=31 Identities=10% Similarity=-0.009 Sum_probs=22.8
Q ss_pred eeEEEc-cCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHY-KDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~-~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
||+++| ++|+. ..+.|.++.+.|.+++.+..
T Consensus 107 Pt~~~~~~~g~~-~~~~G~~~~~~l~~~l~~~l 138 (141)
T 3hxs_A 107 PTIWFVPMKGEP-QVNMGALSKEQLKGYIDKVL 138 (141)
T ss_dssp SEEEEECSSSCC-EEEESCCCHHHHHHHHHHTT
T ss_pred CEEEEEeCCCCE-EEEeCCCCHHHHHHHHHHHH
Confidence 455556 55544 47889999999999997653
No 363
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=82.14 E-value=0.79 Score=26.13 Aligned_cols=29 Identities=14% Similarity=0.178 Sum_probs=22.7
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||++++++|+....+.| .+.+.+.+++++
T Consensus 87 Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~ 115 (117)
T 2xc2_A 87 PTFIAIKNGEKVGDVVG-ASIAKVEDMIKK 115 (117)
T ss_dssp SEEEEEETTEEEEEEES-SCHHHHHHHHHH
T ss_pred ceEEEEeCCcEEEEEeC-CCHHHHHHHHHH
Confidence 56777899987667778 688889988864
No 364
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=81.86 E-value=0.78 Score=26.25 Aligned_cols=30 Identities=7% Similarity=-0.022 Sum_probs=24.0
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....+.|.. .+.+.+++++.
T Consensus 89 Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 89 PTFLFMKEGDVKDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHHH
T ss_pred cEEEEEeCCEEEEEEeCcC-HHHHHHHHHHH
Confidence 5677789998767788887 88899988764
No 365
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=81.73 E-value=0.82 Score=26.85 Aligned_cols=30 Identities=10% Similarity=0.012 Sum_probs=23.3
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....+.| .+.+.|.+++++.
T Consensus 92 Pt~~i~~~G~~~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 92 PTFIIARSGKMLGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp SEEEEEETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred cEEEEEeCCeEEEEEeC-CCHHHHHHHHHHH
Confidence 56777899987667778 6888899888653
No 366
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=81.68 E-value=0.81 Score=26.50 Aligned_cols=34 Identities=12% Similarity=0.034 Sum_probs=26.1
Q ss_pred eeEEEc-cCCcccccCCCccCHHHHHHHhhCCCCC
Q psy3441 9 YVIKHY-KDGEFNKNYERKETVSAFVNFLKDPKGD 42 (100)
Q Consensus 9 ~ti~~~-~~g~~~~~y~g~~~~~~l~~f~~~~~~~ 42 (100)
||++++ ++|+....+.|..+.+.|.+++++...+
T Consensus 88 Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 88 PTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp CEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 455555 7888766788999999999999877553
No 367
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=81.50 E-value=0.45 Score=26.68 Aligned_cols=30 Identities=7% Similarity=0.143 Sum_probs=21.8
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....+.|. +.+.|.+++++.
T Consensus 76 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 105 (107)
T 1gh2_A 76 PTFQFFRNKVRIDQYQGA-DAVGLEEKIKQH 105 (107)
T ss_dssp SEEEEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred cEEEEEECCeEEEEEeCC-CHHHHHHHHHHh
Confidence 577778999876667774 456688887653
No 368
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=81.68 E-value=0.33 Score=28.33 Aligned_cols=35 Identities=11% Similarity=0.025 Sum_probs=25.9
Q ss_pred eeEEEc--cCCcc--cccCCCccCHHHHHHHhhCCCCCC
Q psy3441 9 YVIKHY--KDGEF--NKNYERKETVSAFVNFLKDPKGDI 43 (100)
Q Consensus 9 ~ti~~~--~~g~~--~~~y~g~~~~~~l~~f~~~~~~~~ 43 (100)
||++++ ++|+. ...+.|..+.+.|.+++++..+..
T Consensus 80 Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 80 PTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 466666 56766 667889889999999998876533
No 369
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=80.57 E-value=0.96 Score=25.60 Aligned_cols=29 Identities=10% Similarity=0.070 Sum_probs=22.7
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||+++|++|+....+.|. +.+.|.+++++
T Consensus 79 Pt~~~~~~G~~~~~~~G~-~~~~l~~~i~~ 107 (109)
T 3f3q_A 79 PTLLLFKNGKEVAKVVGA-NPAAIKQAIAA 107 (109)
T ss_dssp SEEEEEETTEEEEEEESS-CHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeCC-CHHHHHHHHHh
Confidence 577778899877777787 67889988864
No 370
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=80.20 E-value=1.5 Score=25.99 Aligned_cols=37 Identities=14% Similarity=0.227 Sum_probs=30.2
Q ss_pred CCCeeEEEccCCcccccCCCccCHHHHHHHhhCCCCC
Q psy3441 6 NLPYVIKHYKDGEFNKNYERKETVSAFVNFLKDPKGD 42 (100)
Q Consensus 6 ~~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~~ 42 (100)
..|.++++.++|+....+.|..+.+.+.+++++....
T Consensus 109 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 109 GQPWTFVVDREGKVVALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp SSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCC
T ss_pred cccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCc
Confidence 3477788889998777788999999999999887653
No 371
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=80.17 E-value=2.2 Score=25.31 Aligned_cols=36 Identities=8% Similarity=0.188 Sum_probs=29.4
Q ss_pred CCCeeEEEccCCcccccCCCccCHHHHHHHhhCCCC
Q psy3441 6 NLPYVIKHYKDGEFNKNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 6 ~~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~ 41 (100)
..|.++++-++|+....+.|..+.+.+.+++++...
T Consensus 105 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 105 VLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp CSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 347788888999877778999999999999887644
No 372
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=78.91 E-value=1.3 Score=26.06 Aligned_cols=31 Identities=16% Similarity=0.202 Sum_probs=22.7
Q ss_pred eeEEEccCCcccccCCC-------ccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYER-------KETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g-------~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....+.| .++.+.+..++.+.
T Consensus 75 PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 75 PTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp SEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred CEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 78999999986555444 45778888888764
No 373
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=78.52 E-value=2.1 Score=25.31 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=23.9
Q ss_pred eeEEEccCCcccccCCCcc-------CHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKE-------TVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~-------~~~~l~~f~~~~~ 40 (100)
||+++|++|+....+.|.. +.+.|.+++.+..
T Consensus 82 Pt~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 82 PTIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp SEEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred CEEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 6788889998655555653 7888999998753
No 374
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=77.64 E-value=3.8 Score=23.93 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=24.4
Q ss_pred eeEEEc-cCCccc--ccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHY-KDGEFN--KNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~-~~g~~~--~~y~g~~~~~~l~~f~~~~~ 40 (100)
+|+.++ ++|+.. ..+.|..+.+.|.++++...
T Consensus 93 Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 93 PTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp SEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred CEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 345555 888765 57899999999999998763
No 375
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=77.63 E-value=1.5 Score=28.11 Aligned_cols=34 Identities=26% Similarity=0.271 Sum_probs=25.6
Q ss_pred eeEEEccCCcccc------------cC---CC-ccCHHHHHHHhhCCCCC
Q psy3441 9 YVIKHYKDGEFNK------------NY---ER-KETVSAFVNFLKDPKGD 42 (100)
Q Consensus 9 ~ti~~~~~g~~~~------------~y---~g-~~~~~~l~~f~~~~~~~ 42 (100)
+||++|++|+... .| .| .++++.|.+|+.+..+.
T Consensus 105 Ptl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~ 154 (178)
T 3ga4_A 105 PHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNI 154 (178)
T ss_dssp CEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTC
T ss_pred CEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCC
Confidence 7888999986433 34 25 89999999999877653
No 376
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=77.48 E-value=1.4 Score=24.83 Aligned_cols=31 Identities=13% Similarity=-0.043 Sum_probs=23.7
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
||++++++|+....+.| .+.+.+.+++.+..
T Consensus 83 Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 83 PTFLFIKDGEKVDSVVG-GRKDDIHTKIVALM 113 (118)
T ss_dssp SEEEEEETTEEEEEEES-CCHHHHHHHHHHHH
T ss_pred cEEEEEeCCeEEEEecC-CCHHHHHHHHHHHh
Confidence 57777899987666777 58888998887654
No 377
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=76.81 E-value=2.7 Score=25.01 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=28.1
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhCCCC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~ 41 (100)
.|.++++.++|+....+.|..+.+.+.+++++...
T Consensus 122 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 122 YPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp SSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred cceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46666766899876677898999999999998754
No 378
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=76.81 E-value=2.8 Score=26.54 Aligned_cols=32 Identities=6% Similarity=0.201 Sum_probs=24.8
Q ss_pred CeeEEEccCCccc--c-------cCCCccC-HHHHHHHhhCC
Q psy3441 8 PYVIKHYKDGEFN--K-------NYERKET-VSAFVNFLKDP 39 (100)
Q Consensus 8 p~ti~~~~~g~~~--~-------~y~g~~~-~~~l~~f~~~~ 39 (100)
++|+++|++|+.. . ...|..+ .+.|.++++..
T Consensus 96 iPT~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 96 PVSVMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp SEEEEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred CCEEEEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 6899999999875 3 6778876 77888877654
No 379
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=75.58 E-value=2.2 Score=23.87 Aligned_cols=30 Identities=17% Similarity=0.188 Sum_probs=21.5
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....+.|. +.+.|.+++++.
T Consensus 78 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 78 PYFIIIHKGTILKELSGA-DPKEYVSLLEDC 107 (112)
T ss_dssp SEEEEEETTEEEEEECSC-CHHHHHHHHHHH
T ss_pred cEEEEEECCEEEEEecCC-CHHHHHHHHHHH
Confidence 566677899877777787 455688887653
No 380
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.40 E-value=0.18 Score=30.00 Aligned_cols=31 Identities=6% Similarity=0.044 Sum_probs=22.3
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||+++|++|+....+.|.++.+.+.+|+.+.
T Consensus 89 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 89 PTLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp SEEEEESSSSEEEEESCBCSSSCBCCCCCCH
T ss_pred CEEEEEECCEEEEEecCcCchHHHHHHHhcc
Confidence 5677789998777778887777666665543
No 381
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=75.12 E-value=1.9 Score=24.08 Aligned_cols=29 Identities=7% Similarity=0.071 Sum_probs=22.1
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
||++++++|+....+.|. +.+.|.+++++
T Consensus 80 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~ 108 (111)
T 2pu9_C 80 PTFKILKENSVVGEVTGA-KYDKLLEAIQA 108 (111)
T ss_dssp SEEEEESSSSEEEEEESS-CHHHHHHHHHH
T ss_pred eEEEEEeCCcEEEEEcCC-CHHHHHHHHHH
Confidence 468888999876667776 47888888764
No 382
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=74.77 E-value=1.7 Score=24.86 Aligned_cols=30 Identities=7% Similarity=0.084 Sum_probs=22.8
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||++++++|+....+.|.. .+.+.+++++.
T Consensus 93 Pt~~~~~~G~~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 93 PTFKILKENSVVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp SEEEEEETTEEEEEEESSC-HHHHHHHHHHH
T ss_pred eEEEEEeCCcEEEEEcCCC-HHHHHHHHHHh
Confidence 4688889998766677764 78888888653
No 383
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=74.69 E-value=1.8 Score=25.17 Aligned_cols=30 Identities=7% Similarity=0.061 Sum_probs=22.6
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
||++++++|+....+.| .+.+.+.+++.+.
T Consensus 93 Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 93 PTFMFLKEGKILDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp SEEEEEETTEEEEEEES-CCHHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeC-CCHHHHHHHHHHh
Confidence 56777899987666777 5888898888653
No 384
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=73.77 E-value=1.2 Score=25.39 Aligned_cols=32 Identities=9% Similarity=0.083 Sum_probs=23.3
Q ss_pred eeEEEccCCcccccCCCc----cCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERK----ETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~----~~~~~l~~f~~~~~ 40 (100)
||+++|.+|+....+.|. ++.+.|.+++.+..
T Consensus 77 Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l 112 (122)
T 3aps_A 77 PSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKL 112 (122)
T ss_dssp SEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHH
T ss_pred ceEEEEeCCCccceeeccccCcCCHHHHHHHHHHHH
Confidence 566777666655556665 89999999987664
No 385
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=73.61 E-value=1.9 Score=25.23 Aligned_cols=31 Identities=6% Similarity=-0.019 Sum_probs=23.7
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
||++++++|+....+.|. +.+.+.+++.+..
T Consensus 101 Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 131 (139)
T 3d22_A 101 PTFFFLRDGQQVDKLVGA-NKPELHKKITAIL 131 (139)
T ss_dssp SEEEEEETTEEEEEEESC-CHHHHHHHHHHHH
T ss_pred cEEEEEcCCeEEEEEeCC-CHHHHHHHHHHHh
Confidence 466667999876667787 8889999887654
No 386
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=72.93 E-value=1.9 Score=28.14 Aligned_cols=31 Identities=23% Similarity=0.343 Sum_probs=23.9
Q ss_pred eeEEEccCCcccccCCCccC-------HHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKET-------VSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~-------~~~l~~f~~~~ 39 (100)
||+++|++|+....|.|..+ .+.|..|+.+.
T Consensus 174 PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 174 PTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp SEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 67888899987666777665 48899998875
No 387
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=72.90 E-value=4.8 Score=24.44 Aligned_cols=34 Identities=18% Similarity=0.341 Sum_probs=25.7
Q ss_pred CCCeeEEEccCCcccccCCCccC-HHHHHHHhhCC
Q psy3441 6 NLPYVIKHYKDGEFNKNYERKET-VSAFVNFLKDP 39 (100)
Q Consensus 6 ~~p~ti~~~~~g~~~~~y~g~~~-~~~l~~f~~~~ 39 (100)
+.|.++++-++|+....+.|..+ .+.+.+++++.
T Consensus 130 ~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 130 AQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTG 164 (172)
T ss_dssp CSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHH
T ss_pred CcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHH
Confidence 34666665589987777789888 99998888654
No 388
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=72.81 E-value=2 Score=28.52 Aligned_cols=32 Identities=9% Similarity=0.184 Sum_probs=26.9
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
||+++|++|+....|.|..+.+.+..++....
T Consensus 82 Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 82 PTVYLFQNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred CeEEEEECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 57777899987777899999999999998764
No 389
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=72.65 E-value=4.2 Score=24.15 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=28.5
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhCCCC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~ 41 (100)
.|.++++.++|+....+.|..+.+.+.+++++...
T Consensus 117 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 151 (165)
T 3or5_A 117 IPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALG 151 (165)
T ss_dssp SSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC
T ss_pred CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 47777877999877778899999999999887654
No 390
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=72.12 E-value=2.5 Score=25.57 Aligned_cols=31 Identities=10% Similarity=0.195 Sum_probs=23.9
Q ss_pred eeEEEccCCccc---------ccCCC-ccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFN---------KNYER-KETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~---------~~y~g-~~~~~~l~~f~~~~ 39 (100)
||++++++|+.. ..+.| ..+.+.|.++++..
T Consensus 79 Pt~~~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 79 PSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp SEEEEEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred CeEEEEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 444489999877 67788 78888888888654
No 391
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=72.04 E-value=4.1 Score=24.95 Aligned_cols=33 Identities=15% Similarity=0.083 Sum_probs=27.0
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
.|.++++.++|+....+.|..+.+.|.+++++.
T Consensus 147 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 147 IPTTIVLDKQHRPAAVFLREVTSKDVLDVALPL 179 (183)
T ss_dssp CSEEEEECTTSCEEEEECSCCCHHHHHHHHHHH
T ss_pred CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 478899899998777788888999998887653
No 392
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=70.92 E-value=3.2 Score=24.44 Aligned_cols=32 Identities=13% Similarity=0.068 Sum_probs=25.5
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
.|.++++.++|+....+.|..+.+.+.+++++
T Consensus 118 ~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~ 149 (156)
T 1kng_A 118 VPETFVVGREGTIVYKLVGPITPDNLRSVLLP 149 (156)
T ss_dssp SCEEEEECTTSBEEEEEESCCCHHHHHHTHHH
T ss_pred cCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 47788888999876667888888888887764
No 393
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=70.21 E-value=4.1 Score=23.90 Aligned_cols=31 Identities=13% Similarity=0.091 Sum_probs=22.7
Q ss_pred eeEEEccC--CcccccCC--CccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKD--GEFNKNYE--RKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~--g~~~~~y~--g~~~~~~l~~f~~~~~ 40 (100)
+|+.+|++ |+. ..+. |..+.+.|.+|+++..
T Consensus 80 Ptl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 80 PAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp SEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHHHH
T ss_pred CEEEEEecCcCcc-cCCCCccccCHHHHHHHHHHHH
Confidence 56777876 544 3444 9999999999998764
No 394
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=69.60 E-value=3.5 Score=23.75 Aligned_cols=30 Identities=17% Similarity=0.188 Sum_probs=23.5
Q ss_pred CeeEEEccCCcccccCCCccCHHHHHHHhh
Q psy3441 8 PYVIKHYKDGEFNKNYERKETVSAFVNFLK 37 (100)
Q Consensus 8 p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~ 37 (100)
|.++++-++|+....+.|..+.+.+.++++
T Consensus 116 P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 116 PTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp SEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred CeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 666666688887677889999999988763
No 395
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=68.97 E-value=3.4 Score=24.84 Aligned_cols=33 Identities=9% Similarity=-0.029 Sum_probs=26.1
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
.|.++++.++|+....+.|..+.+.+.+++++.
T Consensus 126 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 126 APETFLIDGNGIIRYRHAGDLNPRVWEEEIKPL 158 (168)
T ss_dssp SSEEEEECTTSBEEEEEESCCCHHHHHHTTHHH
T ss_pred cCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 477899999998766677888888888877643
No 396
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=68.22 E-value=4.6 Score=22.75 Aligned_cols=32 Identities=22% Similarity=0.164 Sum_probs=24.9
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
.|.++++-++|+....+.|..+.+.+.+++++
T Consensus 105 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 105 YPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp SSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred CCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 36666666889876778898999999988764
No 397
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=67.77 E-value=7.5 Score=22.32 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=22.7
Q ss_pred CCCeeEEEccCCcccccCCC-------ccCHHHHHHHhhC
Q psy3441 6 NLPYVIKHYKDGEFNKNYER-------KETVSAFVNFLKD 38 (100)
Q Consensus 6 ~~p~ti~~~~~g~~~~~y~g-------~~~~~~l~~f~~~ 38 (100)
+.|.++++-++|+....+.| .++.+.+.+|+++
T Consensus 91 ~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 91 GIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp CSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHH
T ss_pred ccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHH
Confidence 33544444488987666767 6788888888764
No 398
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=65.13 E-value=7.6 Score=22.00 Aligned_cols=31 Identities=10% Similarity=0.013 Sum_probs=23.9
Q ss_pred CeeEEEccCCcccccCC---CccCHHHHHHHhhCC
Q psy3441 8 PYVIKHYKDGEFNKNYE---RKETVSAFVNFLKDP 39 (100)
Q Consensus 8 p~ti~~~~~g~~~~~y~---g~~~~~~l~~f~~~~ 39 (100)
|.++++-++|+.. .+. |..+.+.+.+++++.
T Consensus 101 P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 101 PAFVFYRADGTST-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp SEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC
T ss_pred CEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHH
Confidence 6666665888776 777 889999999988753
No 399
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=65.11 E-value=5.5 Score=23.50 Aligned_cols=34 Identities=9% Similarity=-0.022 Sum_probs=27.1
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
.|.++++-++|+....+.|..+.+.+.+.+++..
T Consensus 118 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 151 (158)
T 3eyt_A 118 TPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLL 151 (158)
T ss_dssp SSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHh
Confidence 4778888899987777788889988888887654
No 400
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=64.60 E-value=6.1 Score=23.09 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=25.8
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
.|.++++-++|+....|.|..+.+.+.++++...
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 140 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAW 140 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHH
T ss_pred cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 3666666688887667888889999988887653
No 401
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=64.37 E-value=6.1 Score=22.32 Aligned_cols=32 Identities=6% Similarity=-0.007 Sum_probs=24.0
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
.|.++++-++|+.. .+.|..+.+.+.+++.+.
T Consensus 102 ~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 102 QPAYAFVDPHGNVD-VVRGRMSQDELTRRVTAL 133 (136)
T ss_dssp SSEEEEECTTCCEE-EEESCCCHHHHHHHHHHH
T ss_pred CceEEEECCCCCEE-EEecCCCHHHHHHHHHHH
Confidence 36566655788766 788988999999888654
No 402
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=62.27 E-value=7 Score=23.00 Aligned_cols=34 Identities=12% Similarity=0.009 Sum_probs=26.8
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
.|.++++-++|+....+.|..+.+.+.+.+++..
T Consensus 121 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 154 (160)
T 3lor_A 121 TPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLL 154 (160)
T ss_dssp SSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHH
T ss_pred cceEEEECCCCcEEEEecCcCCHHHHHHHHHHHH
Confidence 4778877789987777788889998888887653
No 403
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=61.62 E-value=0.44 Score=20.97 Aligned_cols=11 Identities=36% Similarity=0.969 Sum_probs=9.0
Q ss_pred CChHHhhhHHH
Q psy3441 82 WCGFCKQLKPE 92 (100)
Q Consensus 82 wC~~C~~~~p~ 92 (100)
.|+-|++++|.
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 59999998874
No 404
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=61.37 E-value=7 Score=22.86 Aligned_cols=35 Identities=20% Similarity=0.161 Sum_probs=27.0
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhCCCC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~ 41 (100)
.|.++++-++|+....+.|..+.+.+.++++....
T Consensus 104 ~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~ 138 (151)
T 2f9s_A 104 LPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKP 138 (151)
T ss_dssp SCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred CCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHh
Confidence 36667766899876667788899999999887643
No 405
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=58.51 E-value=6.9 Score=22.50 Aligned_cols=32 Identities=9% Similarity=0.052 Sum_probs=23.7
Q ss_pred CeeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 8 PYVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 8 p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
|.++++-++|+....+.|..+.+.+.++++..
T Consensus 112 P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 112 PAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRV 143 (148)
T ss_dssp SEEEEECTTCBEEEEEESCSTTHHHHHHHHHH
T ss_pred CEEEEECCCCcEEEEecCCCCHHHHHHHHHHH
Confidence 65666558888766677888888888887654
No 406
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=58.27 E-value=20 Score=21.64 Aligned_cols=46 Identities=15% Similarity=0.117 Sum_probs=28.7
Q ss_pred eEEcCCHHHHHHHHhcCCCcEEEEEEC-CCChHHhhhHHHHHHhHhhC
Q psy3441 54 VVHLPTPQALNKLLKKETRPVLIMFYA-PWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 54 ~v~~~~~~~f~~~~~~~~~~vlv~F~a-~wC~~C~~~~p~~~~la~~l 100 (100)
.|...+.+|...+..+. .++.+.++. .--..-..+.+.++++|+++
T Consensus 15 LV~e~t~en~~~~~~~~-~~~~~l~f~~~~~~~~~~~~~~~~~vAk~f 61 (147)
T 3bj5_A 15 LVIEFTEQTAPKIFGGE-IKTHILLFLPKSVSDYDGKLSNFKTAAESF 61 (147)
T ss_dssp CEEECCTTTHHHHHSSS-CCEEEEEECCTTSSSHHHHHHHHHHHHHTT
T ss_pred eeEEeccccHHHHhcCC-CceEEEEEecCCcHhHHHHHHHHHHHHHHc
Confidence 35555788887776544 454444343 23334667888899988764
No 407
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=57.95 E-value=10 Score=22.64 Aligned_cols=32 Identities=19% Similarity=0.189 Sum_probs=22.9
Q ss_pred CCeeEEEccCCcccccCCCcc--CHHHHHHHhhCC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKE--TVSAFVNFLKDP 39 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~--~~~~l~~f~~~~ 39 (100)
.|.++++-++|+....+ |.. +.+.+.+++++.
T Consensus 117 ~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 117 FPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSA 150 (154)
T ss_dssp SSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHH
Confidence 35555554888876667 877 888888888654
No 408
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=56.80 E-value=8.7 Score=23.48 Aligned_cols=33 Identities=12% Similarity=-0.011 Sum_probs=26.0
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
.|.++++.++|+....+.|..+.+.+.+++...
T Consensus 133 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 165 (176)
T 3kh7_A 133 APETYLIDKQGIIRHKIVGVVDQKVWREQLAPL 165 (176)
T ss_dssp SCEEEEECTTCBEEEEEESCCCHHHHHHHTHHH
T ss_pred CCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 477888889998766777888888888777654
No 409
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=56.73 E-value=5 Score=23.94 Aligned_cols=31 Identities=10% Similarity=-0.009 Sum_probs=22.9
Q ss_pred CeeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 8 PYVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 8 p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
|.++++.++|+....|.|..+.+.+.+.+++
T Consensus 134 P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 164 (169)
T 2v1m_A 134 FSKFLVDRQGQPVKRYSPTTAPYDIEGDIME 164 (169)
T ss_dssp TCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred ceEEEECCCCCEEEEcCCCCCHHHHHHHHHH
Confidence 6788988999876667777676666665543
No 410
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=56.23 E-value=13 Score=22.96 Aligned_cols=32 Identities=13% Similarity=0.004 Sum_probs=26.3
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
.++++.++|.....|.|..+.+.+.+.++...
T Consensus 151 ~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL 182 (187)
T 3dwv_A 151 TSFLIDRDGVPVERFSPGASVKDIEEKLIPLL 182 (187)
T ss_dssp CEEEECTTSCEEEEECTTCCHHHHHHHHHHHC
T ss_pred eEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 78888899987777888889998888887653
No 411
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=55.61 E-value=14 Score=22.42 Aligned_cols=31 Identities=13% Similarity=0.129 Sum_probs=21.6
Q ss_pred eeEEEc-cCCcccccCCCc----------cCHHHHHHHhhCC
Q psy3441 9 YVIKHY-KDGEFNKNYERK----------ETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~-~~g~~~~~y~g~----------~~~~~l~~f~~~~ 39 (100)
||+++| ++|+....+.|. .+.+.|.+++++.
T Consensus 105 Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~ 146 (164)
T 1sen_A 105 PRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEA 146 (164)
T ss_dssp SEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHH
T ss_pred CeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHH
Confidence 455556 888766666663 7788888887654
No 412
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=55.29 E-value=12 Score=21.75 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=26.3
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhCCCC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKDPKG 41 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~~ 41 (100)
.|.++++-++|+....+.|..+.+.+.+++++...
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~ 143 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSDPKTAEKFNELLG 143 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHT
T ss_pred CCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhc
Confidence 36666666788876777788888889888876644
No 413
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=55.25 E-value=5.6 Score=24.42 Aligned_cols=31 Identities=19% Similarity=0.008 Sum_probs=24.4
Q ss_pred CeeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 8 PYVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 8 p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
|.++++.++|+....|.|..+.+.+.+.+++
T Consensus 151 P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 151 FTKFLIDKNGCVVKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp TCEEEECTTSCEEEEECTTSCTHHHHTTSGG
T ss_pred ceEEEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 6788888999876678888888888776654
No 414
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=52.80 E-value=12 Score=22.28 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=24.7
Q ss_pred CeeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 8 PYVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 8 p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
|.++++.++|+....|.|..+.+.+.+.++..
T Consensus 131 ~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 162 (171)
T 2rli_A 131 IAIYLLNPDGLFTDYYGRSRSAEQISDSVRRH 162 (171)
T ss_dssp CEEEEECTTSCEEEEEESSCCHHHHHHHHHHH
T ss_pred ceEEEECCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 46788889998766688888888888777643
No 415
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=52.01 E-value=15 Score=22.45 Aligned_cols=31 Identities=10% Similarity=0.087 Sum_probs=25.0
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
.++++.++|+....|.|..+.+.+.+.+++.
T Consensus 149 ~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 179 (181)
T 2p31_A 149 WKYLVAPDGKVVGAWDPTVSVEEVRPQITAL 179 (181)
T ss_dssp CEEEECTTSCEEEEECTTSCHHHHHHHHHTT
T ss_pred eEEEEcCCCCEEEEeCCCCCHHHHHHHHHHH
Confidence 6888889998776788888888888887754
No 416
>3dmo_A Cytidine deaminase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.60A {Burkholderia pseudomallei}
Probab=51.19 E-value=7 Score=24.02 Aligned_cols=15 Identities=33% Similarity=0.583 Sum_probs=12.2
Q ss_pred CCCChHHhhhHHHHH
Q psy3441 80 APWCGFCKQLKPEFL 94 (100)
Q Consensus 80 a~wC~~C~~~~p~~~ 94 (100)
.+=||.|+++.-.|.
T Consensus 93 ~~PCG~CRQ~l~Ef~ 107 (138)
T 3dmo_A 93 IAPCGACRQVMIELG 107 (138)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHhC
Confidence 355999999998884
No 417
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=49.15 E-value=13 Score=24.66 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=22.6
Q ss_pred eeEEEccCCcccccCCC-------ccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYER-------KETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g-------~~~~~~l~~f~~~~~ 40 (100)
||+++|++|.....+.| .++.+.|..|+.+..
T Consensus 187 PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 187 PTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp SEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred CEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 57778889975433333 267888999998874
No 418
>3r2n_A Cytidine deaminase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.30A {Mycobacterium leprae} SCOP: c.97.1.0
Probab=48.24 E-value=8.3 Score=23.64 Aligned_cols=15 Identities=40% Similarity=0.470 Sum_probs=12.3
Q ss_pred CCCChHHhhhHHHHH
Q psy3441 80 APWCGFCKQLKPEFL 94 (100)
Q Consensus 80 a~wC~~C~~~~p~~~ 94 (100)
.+=||.|+++.-.|.
T Consensus 90 ~~PCG~CRQ~l~E~~ 104 (138)
T 3r2n_A 90 LMPCGRCRQLLYEHG 104 (138)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhC
Confidence 356999999998875
No 419
>3mpz_A Cytidine deaminase; ssgcid, structu genomics, seattle structural genomics center for infectious hydrolase; 1.70A {Mycobacterium smegmatis} PDB: 3ijf_X 4f3w_A
Probab=46.93 E-value=8.9 Score=23.92 Aligned_cols=14 Identities=36% Similarity=0.498 Sum_probs=11.9
Q ss_pred CCChHHhhhHHHHH
Q psy3441 81 PWCGFCKQLKPEFL 94 (100)
Q Consensus 81 ~wC~~C~~~~p~~~ 94 (100)
+=||.|+++.-.|.
T Consensus 106 ~PCG~CRQ~L~Ef~ 119 (150)
T 3mpz_A 106 MPCGRCRQVLLEHG 119 (150)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhC
Confidence 55999999998875
No 420
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=45.50 E-value=21 Score=21.92 Aligned_cols=31 Identities=13% Similarity=0.025 Sum_probs=24.6
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
.++++.++|+....+.|..+.+.+.+.+++.
T Consensus 153 ~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 183 (190)
T 2vup_A 153 TSFLIDRDGVPVERFSPGASVKDIEKKLIPL 183 (190)
T ss_dssp CEEEECTTSCEEEEECTTCCHHHHHHHHHHH
T ss_pred eEEEECCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 6888889998777778888888887777653
No 421
>1fme_A FSD-EY peptide; beta-BETA-alpha, zinc finger, designed protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1fsd_A 1fsv_A 2k6r_A* 1psv_A
Probab=45.04 E-value=17 Score=15.57 Aligned_cols=20 Identities=20% Similarity=0.406 Sum_probs=14.6
Q ss_pred cCCC--ccCHHHHHHHhhCCCC
Q psy3441 22 NYER--KETVSAFVNFLKDPKG 41 (100)
Q Consensus 22 ~y~g--~~~~~~l~~f~~~~~~ 41 (100)
.|.| -++..++.+|+.++.+
T Consensus 6 kykgrtfrnekelrdfiekfkg 27 (28)
T 1fme_A 6 KYKGRTFRNEKELRDFIEKFKG 27 (28)
T ss_dssp ESSSCEECCHHHHHHHHHHCCC
T ss_pred hhcccccccHHHHHHHHHHhcC
Confidence 3555 3788899999987754
No 422
>1z9h_A Membrane-associated prostaglandin E synthase-2; membran associated protein, indomethacin, isomerase; HET: IMN; 2.60A {Macaca fascicularis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pbj_A*
Probab=45.03 E-value=25 Score=23.23 Aligned_cols=25 Identities=16% Similarity=0.323 Sum_probs=19.5
Q ss_pred cEEEEEECCCChHHhhhHHHHHHhH
Q psy3441 73 PVLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 73 ~vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
..+..|+.++|+.|++..-.++.+.
T Consensus 13 ~~~~Ly~~~~sp~~~~v~~~L~~~g 37 (290)
T 1z9h_A 13 LQLTLYQYKTCPFCSKVRAFLDFHA 37 (290)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcC
Confidence 3466678999999999888777653
No 423
>2d30_A Cytidine deaminase; purines, pyrimidines, nucleosides, nucleotides, salvage of nucleosides and nucleotides, structural genomics; 2.40A {Bacillus anthracis} SCOP: c.97.1.1
Probab=43.21 E-value=11 Score=23.12 Aligned_cols=15 Identities=40% Similarity=0.846 Sum_probs=11.9
Q ss_pred CCCChHHhhhHHHHH
Q psy3441 80 APWCGFCKQLKPEFL 94 (100)
Q Consensus 80 a~wC~~C~~~~p~~~ 94 (100)
.+=||.|+++.-.|.
T Consensus 92 ~~PCG~CRQ~l~E~~ 106 (141)
T 2d30_A 92 VPPCGACRQVMVELC 106 (141)
T ss_dssp CCCCHHHHHHHHHHS
T ss_pred cCcCHHHHHHHHHhc
Confidence 345999999998773
No 424
>3oj6_A Blasticidin-S deaminase; ssgcid, seattle structural genomics for infectious disease, hydrolase; 1.70A {Coccidioides immitis}
Probab=42.19 E-value=12 Score=23.58 Aligned_cols=13 Identities=31% Similarity=0.818 Sum_probs=11.4
Q ss_pred CCChHHhhhHHHH
Q psy3441 81 PWCGFCKQLKPEF 93 (100)
Q Consensus 81 ~wC~~C~~~~p~~ 93 (100)
+=||.|+++.-.|
T Consensus 110 ~PCG~CRQvL~Ef 122 (158)
T 3oj6_A 110 SPCGRCRQVLADL 122 (158)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 5799999998877
No 425
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=39.84 E-value=13 Score=23.66 Aligned_cols=31 Identities=13% Similarity=-0.035 Sum_probs=23.8
Q ss_pred CeeEEEccCCcccccCCCccCHHHHHHHhhC
Q psy3441 8 PYVIKHYKDGEFNKNYERKETVSAFVNFLKD 38 (100)
Q Consensus 8 p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~ 38 (100)
|.|+++.++|+....|.|..+.+.+.+.++.
T Consensus 174 p~tflID~~G~i~~~~~g~~~~~~l~~~I~~ 204 (208)
T 2f8a_A 174 FEKFLVGPDGVPLRRYSRRFQTIDIEPDIEA 204 (208)
T ss_dssp TCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred ceEEEEcCCCcEEEEeCCCCCHHHHHHHHHH
Confidence 7799999999877778787777766666543
No 426
>2pd0_A Hypothetical protein; structural genomics, structural genomics consortium, SGC, UN function; HET: MES; 2.30A {Cryptosporidium parvum}
Probab=37.87 E-value=5.3 Score=26.47 Aligned_cols=31 Identities=23% Similarity=0.444 Sum_probs=22.1
Q ss_pred EEcCCHHHHHHHHhc---CCCcEEEEEECCCChH
Q psy3441 55 VHLPTPQALNKLLKK---ETRPVLIMFYAPWCGF 85 (100)
Q Consensus 55 v~~~~~~~f~~~~~~---~~~~vlv~F~a~wC~~ 85 (100)
+.--+.+.|.+-|.+ ....-|++=|||.|.|
T Consensus 41 I~~~~keeF~~kvne~~~~~~~~lvdGYAPFCKH 74 (223)
T 2pd0_A 41 IPRMSPYEFLRNVNNYIIENNPTLVDGYADFCKH 74 (223)
T ss_dssp CCSSCHHHHHHHHHHHHHHHCCCCEECSSTTEEE
T ss_pred cCCCCHHHHHHHHHHHHHhcCCccccccccccee
Confidence 432377888887765 2345689999999976
No 427
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=37.82 E-value=35 Score=18.57 Aligned_cols=28 Identities=11% Similarity=0.052 Sum_probs=19.8
Q ss_pred eeEEEccCCcccccCCCccCHHHHHHHhhCCC
Q psy3441 9 YVIKHYKDGEFNKNYERKETVSAFVNFLKDPK 40 (100)
Q Consensus 9 ~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~~ 40 (100)
||+.+ .+|+... |.++.+.|.+++....
T Consensus 49 Ptl~~-~~G~~v~---g~~~~~~L~~~l~~~~ 76 (87)
T 1ttz_A 49 PVLRD-PMGRELD---WPFDAPRLRAWLDAAP 76 (87)
T ss_dssp SEEEC-TTCCEEE---SCCCHHHHHHHHHTCC
T ss_pred CeEEE-ECCEEEe---CCCCHHHHHHHHHHHH
Confidence 45554 7776542 7889999999987654
No 428
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=36.95 E-value=78 Score=22.93 Aligned_cols=37 Identities=19% Similarity=0.151 Sum_probs=27.9
Q ss_pred HHHHHHhcCCCcEEEEEECCCChHHhhhHHHHHHhHh
Q psy3441 62 ALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 62 ~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~ 98 (100)
+....+..-.++|.+.++..-|..|..+...++++++
T Consensus 9 ~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~ 45 (521)
T 1hyu_A 9 QLRAYLEKLTKPVELIATLDDSAKSAEIKELLAEIAE 45 (521)
T ss_dssp HHHHHHTTCCSCEEEEEECCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEEEeCCCcchHHHHHHHHHHHH
Confidence 3444444445788888888889999999999998764
No 429
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Probab=33.43 E-value=38 Score=21.41 Aligned_cols=24 Identities=8% Similarity=0.185 Sum_probs=19.5
Q ss_pred EEEEEECCCChHHhhhHHHHHHhH
Q psy3441 74 VLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 74 vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
.+..|+.++|+.|++..=.++.+.
T Consensus 23 ~~~Ly~~~~sp~~~~v~~~L~~~g 46 (241)
T 3vln_A 23 SIRIYSMRFSPFAERTRLVLKAKG 46 (241)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHHT
T ss_pred eEEEEcCCCCcHHHHHHHHHHHcC
Confidence 466688999999999988877654
No 430
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=32.95 E-value=2.4 Score=18.97 Aligned_cols=16 Identities=19% Similarity=0.370 Sum_probs=11.9
Q ss_pred ChHHhhhHHHHHHhHh
Q psy3441 83 CGFCKQLKPEFLAGRD 98 (100)
Q Consensus 83 C~~C~~~~p~~~~la~ 98 (100)
|+.|+..+|..+.+-.
T Consensus 6 CpvCk~q~Pd~kt~~~ 21 (28)
T 2jvx_A 6 CPKCQYQAPDMDTLQI 21 (28)
T ss_dssp CTTSSCEESSHHHHHH
T ss_pred CccccccCcChHHHHH
Confidence 8888888887766543
No 431
>2z3g_A Blasticidin-S deaminase; hydrolase, cytidine deaminase family, zinc, tetramer; HET: TRE; 1.50A {Aspergillus terreus} SCOP: c.97.1.1 PDB: 1wn6_A* 1wn5_A* 2z3h_A* 2z3j_A 2z3i_A*
Probab=32.82 E-value=20 Score=21.45 Aligned_cols=14 Identities=29% Similarity=0.669 Sum_probs=11.4
Q ss_pred CCCChHHhhhHHHH
Q psy3441 80 APWCGFCKQLKPEF 93 (100)
Q Consensus 80 a~wC~~C~~~~p~~ 93 (100)
.+=||.|+++.-.|
T Consensus 85 ~~PCG~Crq~l~e~ 98 (130)
T 2z3g_A 85 LSPCGRCRQVLLDL 98 (130)
T ss_dssp ECCCHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHh
Confidence 34599999998877
No 432
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=32.62 E-value=33 Score=23.95 Aligned_cols=33 Identities=6% Similarity=-0.057 Sum_probs=25.5
Q ss_pred CCeeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 7 LPYVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 7 ~p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
.|.++++.++|+....+.|..+.+.+.+++++.
T Consensus 165 ~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 165 WPAEYLIDATGTVRHIKFGEGDYNVTETLVRQL 197 (352)
T ss_dssp ESEEEEECTTSBEEEEEESBCCHHHHHHHHHHH
T ss_pred cCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 367777779998777778888888888887643
No 433
>4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis}
Probab=32.61 E-value=36 Score=21.61 Aligned_cols=26 Identities=12% Similarity=0.040 Sum_probs=20.8
Q ss_pred CcEEEEEECCCChHHhhhHHHHHHhH
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
+..+..|+.++|+.|++..-.++...
T Consensus 10 ~~~~~Ly~~~~sp~~~~vr~~L~~~g 35 (231)
T 4dej_A 10 RSVMTLYSGKDDLKSHQVRLVLAEKG 35 (231)
T ss_dssp CSSCEEEECSSCHHHHHHHHHHHHHT
T ss_pred CceEEEEcCCCChHHHHHHHHHHHcC
Confidence 45566789999999999988877654
No 434
>2l9z_A PR domain zinc finger protein 4; zinc-binding domain, transcription; NMR {Homo sapiens}
Probab=32.08 E-value=5 Score=19.31 Aligned_cols=8 Identities=38% Similarity=1.618 Sum_probs=6.4
Q ss_pred CChHHhhh
Q psy3441 82 WCGFCKQL 89 (100)
Q Consensus 82 wC~~C~~~ 89 (100)
||..|+++
T Consensus 13 ~CE~C~~~ 20 (39)
T 2l9z_A 13 WCTLCDRA 20 (39)
T ss_dssp EEGGGTEE
T ss_pred HHHHHhhh
Confidence 88888875
No 435
>3vk8_A Probable formamidopyrimidine-DNA glycosylase; DNA glycosylase, hneil1 ortholog, DNA lesion, thymine glycol zincless finger; HET: DNA CTG; 2.00A {Acanthamoeba polyphaga mimivirus} PDB: 3vk7_A* 3a42_A 3a46_A* 3a45_A*
Probab=31.68 E-value=7 Score=26.91 Aligned_cols=11 Identities=18% Similarity=0.468 Sum_probs=7.4
Q ss_pred CCCChHHhhhH
Q psy3441 80 APWCGFCKQLK 90 (100)
Q Consensus 80 a~wC~~C~~~~ 90 (100)
+=||+.||...
T Consensus 279 t~~CP~CQ~~~ 289 (295)
T 3vk8_A 279 TYWAPAIQKLE 289 (295)
T ss_dssp EEECTTTCBCC
T ss_pred cEECCCCCCCc
Confidence 44788887653
No 436
>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*
Probab=31.17 E-value=31 Score=21.81 Aligned_cols=18 Identities=11% Similarity=0.219 Sum_probs=14.5
Q ss_pred ECCCChHHhhhHHHHHHh
Q psy3441 79 YAPWCGFCKQLKPEFLAG 96 (100)
Q Consensus 79 ~a~wC~~C~~~~p~~~~l 96 (100)
..|||++|.+..-.++..
T Consensus 18 ~~~~SP~~~kvr~~L~~k 35 (253)
T 4f03_A 18 HSPWSPNTWKIRYALNYK 35 (253)
T ss_dssp TCCCCHHHHHHHHHHHHH
T ss_pred CCCcChhHHHHHHHHHHc
Confidence 479999999998777653
No 437
>3tfg_A ALR2278 protein; heme-based sensor domain, GAS binding, signaling protein; HET: HEM; 1.90A {Nostoc SP} PDB: 3tfd_A* 3tfe_A* 3tff_A* 2o09_A* 2o0c_A* 2o0g_A* 3l6j_A* 3tf8_A* 3tf9_A* 3tfa_A*
Probab=30.18 E-value=59 Score=20.49 Aligned_cols=29 Identities=7% Similarity=0.217 Sum_probs=25.3
Q ss_pred CcEEEEEECCCChHHhhhHHHHHHhHhhC
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEFLAGRDNL 100 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~~~la~~l 100 (100)
.-+.+.++++.||-|.-+.-.++.+|+.|
T Consensus 128 ~~l~l~Y~S~R~gl~~~~~Gli~~~A~~f 156 (189)
T 3tfg_A 128 KSMELHYQSTRCGLAPMVLGLLHGLGKRF 156 (189)
T ss_dssp TEEEEEEECSSSSCHHHHHHHHHHHHHHT
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 55778899999999999999999998754
No 438
>1wr6_A ADP-ribosylation factor binding protein GGA3; three-helix bundle, clathrin coat adaptor protein, protein transport/signaling protein complex; 2.60A {Homo sapiens} SCOP: a.7.8.1 PDB: 1yd8_G
Probab=29.75 E-value=31 Score=20.26 Aligned_cols=16 Identities=6% Similarity=0.221 Sum_probs=13.6
Q ss_pred hHHhhhHHHHHHhHhh
Q psy3441 84 GFCKQLKPEFLAGRDN 99 (100)
Q Consensus 84 ~~C~~~~p~~~~la~~ 99 (100)
..|++++|.+.+++.+
T Consensus 45 ~~ck~~qp~i~kL~~e 60 (111)
T 1wr6_A 45 DQCENKRRTLFKLASE 60 (111)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4699999999999854
No 439
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=29.37 E-value=50 Score=21.15 Aligned_cols=32 Identities=16% Similarity=-0.059 Sum_probs=25.2
Q ss_pred CeeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 8 PYVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 8 p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
|.|+++-++|.....|.|..+.+.+.+.++..
T Consensus 178 pttfLID~~G~vv~~~~g~~~~~~l~~~I~~l 209 (215)
T 2i3y_A 178 FEKFLVGPDGIPVMRWSHRATVSSVKTDILAY 209 (215)
T ss_dssp TCEEEECTTSCEEEEECTTSCHHHHHHHHHHH
T ss_pred ceEEEECCCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 56888889998777788888888887777653
No 440
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=28.98 E-value=52 Score=20.85 Aligned_cols=32 Identities=16% Similarity=-0.098 Sum_probs=24.9
Q ss_pred CeeEEEccCCcccccCCCccCHHHHHHHhhCC
Q psy3441 8 PYVIKHYKDGEFNKNYERKETVSAFVNFLKDP 39 (100)
Q Consensus 8 p~ti~~~~~g~~~~~y~g~~~~~~l~~f~~~~ 39 (100)
|.|+++-++|.....|.|..+.+.+...++..
T Consensus 160 ~ttflID~~G~i~~~~~g~~~~~~l~~~I~~l 191 (207)
T 2r37_A 160 FEKFLVGPDGIPIMRWHHRTTVSNVKMDILSY 191 (207)
T ss_dssp TCEEEECTTSCEEEEECTTSCHHHHHHHHHHH
T ss_pred ceEEEECCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 56888889998777788888888887776543
No 441
>3u6p_A Formamidopyrimidine-DNA glycosylase; DNA glycosylase, DNA repair, sequence context; HET: DNA 08Q; 1.60A {Geobacillus stearothermophilus} PDB: 3u6d_A* 3u6c_A* 3u6l_A* 3u6m_A* 3u6o_A* 3u6e_A* 3u6q_A* 3u6s_A* 3gp1_A* 3sbj_A* 2f5q_A* 2f5s_A* 3gq4_A* 3gpy_A* 2f5n_A 2f5o_A 2f5p_A 3sau_A* 3sar_A* 3sav_A* ...
Probab=27.57 E-value=8.9 Score=26.05 Aligned_cols=14 Identities=0% Similarity=-0.138 Sum_probs=7.9
Q ss_pred ccCHHHHHHHhhCC
Q psy3441 26 KETVSAFVNFLKDP 39 (100)
Q Consensus 26 ~~~~~~l~~f~~~~ 39 (100)
+++.+.+.+-++..
T Consensus 141 ~f~~~~~~~~l~~~ 154 (273)
T 3u6p_A 141 AFSPAVLAERAVKT 154 (273)
T ss_dssp TSCHHHHHHHHHTC
T ss_pred cCCHHHHHHHHhcC
Confidence 45666666555543
No 442
>2fr5_A Cytidine deaminase; tetrahydrouridine, protein-inhibitor COM alternate conformation of Arg68, hydrolase; HET: TYU; 1.48A {Mus musculus} SCOP: c.97.1.1 PDB: 1zab_A* 2fr6_A* 1mq0_A*
Probab=27.42 E-value=22 Score=21.87 Aligned_cols=13 Identities=46% Similarity=0.979 Sum_probs=10.6
Q ss_pred CCChHHhhhHHHH
Q psy3441 81 PWCGFCKQLKPEF 93 (100)
Q Consensus 81 ~wC~~C~~~~p~~ 93 (100)
+=||.|+++.-.|
T Consensus 97 ~PCG~Crq~l~E~ 109 (146)
T 2fr5_A 97 SPCGACRQVMREF 109 (146)
T ss_dssp CCCHHHHHHHHHT
T ss_pred CCCHHHHHHHHHh
Confidence 3599999998776
No 443
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*
Probab=26.68 E-value=57 Score=20.85 Aligned_cols=19 Identities=21% Similarity=0.301 Sum_probs=15.4
Q ss_pred ECCCChHHhhhHHHHHHhH
Q psy3441 79 YAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 79 ~a~wC~~C~~~~p~~~~la 97 (100)
+.++|+.|++..-.++...
T Consensus 26 ~~~~sp~~~rv~~~L~~~g 44 (247)
T 2r4v_A 26 SIGNCPFCQRLFMILWLKG 44 (247)
T ss_dssp SBCSCHHHHHHHHHHHHHT
T ss_pred cCCCChhHHHHHHHHHHcC
Confidence 6889999999887777653
No 444
>1r5t_A Cytidine deaminase; zinc dependent deaminase, RNA editing, apobec-1 related protein, hydrolase; 2.00A {Saccharomyces cerevisiae} SCOP: c.97.1.1
Probab=26.29 E-value=18 Score=22.04 Aligned_cols=13 Identities=46% Similarity=1.027 Sum_probs=10.9
Q ss_pred CCChHHhhhHHHH
Q psy3441 81 PWCGFCKQLKPEF 93 (100)
Q Consensus 81 ~wC~~C~~~~p~~ 93 (100)
+=||.|+++.-.|
T Consensus 94 ~PCG~CRq~l~e~ 106 (142)
T 1r5t_A 94 SPCGVCRQFINEF 106 (142)
T ss_dssp CCCHHHHHHHHTT
T ss_pred CHHHHHHHHHHHh
Confidence 6699999998766
No 445
>1k82_A Formamidopyrimidine-DNA glycosylase; protein-DNA complex, DNA repair, beta sandwich, zinc finger, helix two-turns helix, hydrolase/DNA complex; HET: PED; 2.10A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=26.13 E-value=9.8 Score=25.74 Aligned_cols=13 Identities=0% Similarity=-0.309 Sum_probs=6.8
Q ss_pred ccCHHHHHHHhhC
Q psy3441 26 KETVSAFVNFLKD 38 (100)
Q Consensus 26 ~~~~~~l~~f~~~ 38 (100)
+++.+.+.+-++.
T Consensus 136 ~f~~~~~~~~l~~ 148 (268)
T 1k82_A 136 DFNGEYLHQKCAK 148 (268)
T ss_dssp TSCHHHHHHHHTT
T ss_pred cCCHHHHHHHHhc
Confidence 3555555555543
No 446
>2xzf_A Formamidopyrimidine-DNA glycosylase; hydrolase-DNA complex; HET: VET; 1.80A {Lactococcus lactis subsp} PDB: 1pm5_A* 1xc8_A* 1pji_A* 2xzu_A* 3c58_A* 1tdz_A* 1nnj_A 1kfv_A 1pjj_A*
Probab=26.02 E-value=10 Score=25.72 Aligned_cols=12 Identities=17% Similarity=0.083 Sum_probs=5.6
Q ss_pred ccCHHHHHHHhh
Q psy3441 26 KETVSAFVNFLK 37 (100)
Q Consensus 26 ~~~~~~l~~f~~ 37 (100)
+++.+.+.+-++
T Consensus 139 ~f~~~~~~~~l~ 150 (271)
T 2xzf_A 139 DFDEKLFREKLR 150 (271)
T ss_dssp TCCHHHHHHHHH
T ss_pred cCCHHHHHHHHh
Confidence 344555544443
No 447
>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase, dehydroascorbate reductase, reductase; 1.70A {Homo sapiens} PDB: 3q19_A* 3qag_A*
Probab=25.91 E-value=56 Score=20.56 Aligned_cols=24 Identities=8% Similarity=0.351 Sum_probs=19.2
Q ss_pred EEEEEECCCChHHhhhHHHHHHhH
Q psy3441 74 VLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 74 vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
.+..++.++|+.|++..=.++.+.
T Consensus 23 ~~~Ly~~~~sp~~~~v~~~L~~~g 46 (239)
T 3q18_A 23 LIRIYSMRFCPYSHRTRLVLKAKD 46 (239)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT
T ss_pred eEEEEeCCCChHHHHHHHHHHHcC
Confidence 466688999999999988777653
No 448
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=25.59 E-value=33 Score=21.76 Aligned_cols=17 Identities=18% Similarity=0.257 Sum_probs=14.5
Q ss_pred CChHHhhhHHHHHHhHh
Q psy3441 82 WCGFCKQLKPEFLAGRD 98 (100)
Q Consensus 82 wC~~C~~~~p~~~~la~ 98 (100)
-|+.|++....++.++.
T Consensus 34 ~C~~Cr~~v~~l~~~~~ 50 (195)
T 2q1z_B 34 LCDECRARAGALDAVGG 50 (195)
T ss_dssp HCHHHHHHHHHHHHHHH
T ss_pred HCHHHHHHHHHHHHHHH
Confidence 49999999999988764
No 449
>3twl_A Formamidopyrimidine-DNA glycosylase 1; helix two turns helix, zinc-LESS finger, hydrolase, DNA DAMA repair, DNA-binding, glycosidase, lyase; 1.70A {Arabidopsis thaliana} PDB: 3twm_A* 3twk_A
Probab=25.36 E-value=13 Score=25.83 Aligned_cols=13 Identities=8% Similarity=0.066 Sum_probs=7.9
Q ss_pred CCCChHHhhhHHH
Q psy3441 80 APWCGFCKQLKPE 92 (100)
Q Consensus 80 a~wC~~C~~~~p~ 92 (100)
+=||+.||...+.
T Consensus 269 t~~CP~CQ~~~~~ 281 (310)
T 3twl_A 269 TAYVPELQKLYGK 281 (310)
T ss_dssp --ECTTTCCCCHH
T ss_pred cEECCCCcCCCCC
Confidence 5578888876554
No 450
>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis}
Probab=25.24 E-value=77 Score=19.49 Aligned_cols=23 Identities=22% Similarity=0.299 Sum_probs=18.4
Q ss_pred EEEEEECCCChHHhhhHHHHHHh
Q psy3441 74 VLIMFYAPWCGFCKQLKPEFLAG 96 (100)
Q Consensus 74 vlv~F~a~wC~~C~~~~p~~~~l 96 (100)
.+..|+.+.|+.|++..-.++..
T Consensus 10 ~~~Ly~~~~s~~~~~v~~~L~~~ 32 (213)
T 1yy7_A 10 VMTLFSGPTDIFSHQVRIVLAEK 32 (213)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHH
T ss_pred ceEEEcCCCChhHHHHHHHHHHc
Confidence 46678899999999988777664
No 451
>1ee8_A MUTM (FPG) protein; beta sandwich, zinc finger, helix two-turns helix, riken STR genomics/proteomics initiative, RSGI, structural genomics; 1.90A {Thermus thermophilus} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=25.04 E-value=7.2 Score=26.42 Aligned_cols=13 Identities=23% Similarity=0.243 Sum_probs=6.7
Q ss_pred ccCHHHHHHHhhC
Q psy3441 26 KETVSAFVNFLKD 38 (100)
Q Consensus 26 ~~~~~~l~~f~~~ 38 (100)
+++.+.+.+-++.
T Consensus 129 ~f~~~~~~~~l~~ 141 (266)
T 1ee8_A 129 AFAFPGFFRGLKE 141 (266)
T ss_dssp TCCHHHHHHHHHT
T ss_pred cCCHHHHHHHHhc
Confidence 4555555555543
No 452
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A*
Probab=24.95 E-value=30 Score=25.42 Aligned_cols=30 Identities=13% Similarity=0.367 Sum_probs=21.0
Q ss_pred CCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChH
Q psy3441 52 QAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGF 85 (100)
Q Consensus 52 ~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~ 85 (100)
..++.+.+-+.|...+.+.+..+ -+|||+.
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 458 (501)
T 1nj1_A 429 SEIREAETLEEASRIVDEKRGII----SFMWCGE 458 (501)
T ss_dssp TTEEECSSHHHHHHHHHHHCSEE----EEEECCC
T ss_pred hCEEEcCCHHHHHHHHhhCCCEE----EEecCCC
Confidence 45677888888988887642432 4799953
No 453
>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A
Probab=24.71 E-value=60 Score=19.99 Aligned_cols=23 Identities=9% Similarity=0.155 Sum_probs=18.1
Q ss_pred EEEEECCCChHHhhhHHHHHHhH
Q psy3441 75 LIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 75 lv~F~a~wC~~C~~~~p~~~~la 97 (100)
+..|+.+.|+.|++..=.++.+.
T Consensus 9 ~~Ly~~~~s~~~~~v~~~L~~~g 31 (215)
T 3lyp_A 9 LACYSDPADHYSHRVRIVLAEKG 31 (215)
T ss_dssp CEEEECTTCHHHHHHHHHHHHHT
T ss_pred eEEEeCCCCchHHHHHHHHHHCC
Confidence 44588999999999887777654
No 454
>1k3x_A Endonuclease VIII; hydrolase/DNA, hydrolase-DNA complex; HET: BRU PED; 1.25A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8 PDB: 1k3w_A* 1q39_A 2ea0_A* 2oq4_A* 1q3c_A 2opf_A* 1q3b_A*
Probab=24.24 E-value=11 Score=25.35 Aligned_cols=11 Identities=18% Similarity=-0.112 Sum_probs=4.7
Q ss_pred cCHHHHHHHhh
Q psy3441 27 ETVSAFVNFLK 37 (100)
Q Consensus 27 ~~~~~l~~f~~ 37 (100)
++.+.+.+-++
T Consensus 134 f~~~~~~~~l~ 144 (262)
T 1k3x_A 134 LTPEVVKERLL 144 (262)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHh
Confidence 44444444443
No 455
>2ijr_A Hypothetical protein API92; structural genomics, PSI, protein structure initiative; 2.70A {Yersinia pseudotuberculosis} SCOP: e.66.1.1
Probab=24.24 E-value=37 Score=23.52 Aligned_cols=24 Identities=21% Similarity=0.170 Sum_probs=18.9
Q ss_pred CcEEEEEECCCChHHhhhHHHHHH
Q psy3441 72 RPVLIMFYAPWCGFCKQLKPEFLA 95 (100)
Q Consensus 72 ~~vlv~F~a~wC~~C~~~~p~~~~ 95 (100)
.-+-|+|=+|||++.-.+.-.+.+
T Consensus 220 ~~L~v~FDTPW~PPs~ev~~~lS~ 243 (300)
T 2ijr_A 220 NSLRLDFDSPSYPPSAELMGELSA 243 (300)
T ss_dssp TEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CeEEEeccCCCCCChHHHHHHHhc
Confidence 557889999999998877665543
No 456
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=24.22 E-value=1.8e+02 Score=20.04 Aligned_cols=62 Identities=10% Similarity=0.030 Sum_probs=33.6
Q ss_pred ccCHHHHHHHhhCCCCCCCCCcccccCCeEEcCCHHHHHHHHhcCCCcEEEEEECCCChHHhhhHHHHH
Q psy3441 26 KETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFL 94 (100)
Q Consensus 26 ~~~~~~l~~f~~~~~~~~~~~~~~~~~~~v~~~~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~ 94 (100)
..+.++|-+.+++... +....|+ .-. -.+.|++++.+....+.|-+.+--.|-++...-.-+
T Consensus 78 ~i~~~efy~~m~~~~~--p~TSqPs---~~~--~~~~f~~l~~~g~~Ii~I~iSS~LSGTy~sA~~Aa~ 139 (320)
T 3pl5_A 78 RLTSRVLLEKIAAGSK--PTTSQVN---VGQ--FESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMARD 139 (320)
T ss_dssp CCCHHHHHHHHHTTCC--CEEECCC---HHH--HHHHHHHHHHTTCCEEEEECCTTTCTHHHHHHHHHH
T ss_pred CcCHHHHHHHHhcCCC--CccCCCC---HHH--HHHHHHHHHHCCCeEEEEecCchHhHHHHHHHHHHH
Confidence 3889999998887422 2222221 111 135566666655445555555556677666654333
No 457
>4iel_A Glutathione S-transferase, N-terminal domain PROT; GST, glutathione S-transferase, enzyme function initiative, structural genomics; HET: GSH; 1.60A {Burkholderia ambifaria}
Probab=23.95 E-value=63 Score=20.20 Aligned_cols=24 Identities=4% Similarity=-0.298 Sum_probs=19.0
Q ss_pred EEEEEECCCChHHhhhHHHHHHhH
Q psy3441 74 VLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 74 vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
.+..|+.++|+.|++..=.++...
T Consensus 23 m~~Ly~~~~sp~~~~vr~~L~~~g 46 (229)
T 4iel_A 23 MLHILGKIPSINVRKVLWLCTELN 46 (229)
T ss_dssp CEEEESCTTCHHHHHHHHHHHHHT
T ss_pred eEEEecCCCCcchHHHHHHHHHCC
Confidence 466678999999999888777653
No 458
>3n5o_A Glutathione transferase; seattle structural genomics center for infectious disease, S GST, pathogenic fungus, coccidioidomycosis; HET: GSH; 1.85A {Coccidioides immitis} PDB: 3lg6_A*
Probab=23.75 E-value=78 Score=19.73 Aligned_cols=24 Identities=8% Similarity=0.007 Sum_probs=19.0
Q ss_pred EEEEEECCCChHHhhhHHHHHHhH
Q psy3441 74 VLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 74 vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
-+..|+.++|+.|++..=.++.+.
T Consensus 9 ~~~Ly~~~~s~~~~~v~~~L~~~g 32 (235)
T 3n5o_A 9 NFELYGYFRSSCSGRLRIAFHLKS 32 (235)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHTT
T ss_pred CeEEEecCCCcHHHHHHHHHHHcC
Confidence 456688899999999988877653
No 459
>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori}
Probab=22.24 E-value=69 Score=20.36 Aligned_cols=24 Identities=13% Similarity=0.092 Sum_probs=19.0
Q ss_pred EEEEEECCCChHHhhhHHHHHHhH
Q psy3441 74 VLIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 74 vlv~F~a~wC~~C~~~~p~~~~la 97 (100)
.+..++.++|+.|++..=.++.+.
T Consensus 26 ~~~Ly~~~~sp~~~~v~~~L~~~g 49 (246)
T 3rbt_A 26 KLRLYHVDMNPYGHRVLLVLEAKR 49 (246)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHTT
T ss_pred ceEEEecCCCccHHHHHHHHHHcC
Confidence 456688999999999888777653
No 460
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=21.86 E-value=5.7 Score=18.50 Aligned_cols=14 Identities=14% Similarity=0.064 Sum_probs=7.9
Q ss_pred ChHHhhhHHHHHHh
Q psy3441 83 CGFCKQLKPEFLAG 96 (100)
Q Consensus 83 C~~C~~~~p~~~~l 96 (100)
|+.|+......+.|
T Consensus 8 CP~C~~~l~s~~~L 21 (34)
T 3mjh_B 8 CPQCMKSLGSADEL 21 (34)
T ss_dssp CTTTCCEESSHHHH
T ss_pred CcHHHHHcCCHHHH
Confidence 77776554444444
No 461
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex, restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE; 1.50A {Helicobacter pylori} PDB: 3fc3_A*
Probab=21.57 E-value=40 Score=22.01 Aligned_cols=12 Identities=25% Similarity=0.525 Sum_probs=10.3
Q ss_pred EECCCChHHhhh
Q psy3441 78 FYAPWCGFCKQL 89 (100)
Q Consensus 78 F~a~wC~~C~~~ 89 (100)
=|+++|..|++.
T Consensus 102 ~l~s~CkeC~~~ 113 (200)
T 3gox_A 102 TTRPSCRECRKN 113 (200)
T ss_dssp EECSSCHHHHHH
T ss_pred ccCccChhhhhc
Confidence 379999999986
No 462
>3b8f_A Putative blasticidin S deaminase; cytidine deaminase, structural genomics, MCSG, protein structure initiative; 1.90A {Bacillus anthracis}
Probab=21.44 E-value=23 Score=21.54 Aligned_cols=14 Identities=21% Similarity=0.475 Sum_probs=11.1
Q ss_pred CCCChHHhhhHHHH
Q psy3441 80 APWCGFCKQLKPEF 93 (100)
Q Consensus 80 a~wC~~C~~~~p~~ 93 (100)
.+=||.|+++.-.|
T Consensus 86 ~sPCG~CRq~l~e~ 99 (142)
T 3b8f_A 86 LSPCGVCQERLFYW 99 (142)
T ss_dssp CCCCHHHHHHHGGG
T ss_pred CCcHHHHHHHHHHh
Confidence 35699999988665
No 463
>3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula elliptica} PDB: 3qaw_A*
Probab=21.41 E-value=70 Score=20.25 Aligned_cols=23 Identities=4% Similarity=0.119 Sum_probs=18.3
Q ss_pred EEEEECCCChHHhhhHHHHHHhH
Q psy3441 75 LIMFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 75 lv~F~a~wC~~C~~~~p~~~~la 97 (100)
+..||.+.|+.|++..-.++.+.
T Consensus 27 ~~Ly~~~~sp~~~rv~~~L~~~g 49 (243)
T 3qav_A 27 PFVYWGSGSPPCWKVLLVLQEKK 49 (243)
T ss_dssp CEEEECTTCHHHHHHHHHHHHTT
T ss_pred cEEEeCCCCcchHHHHHHHHHcC
Confidence 44588999999999888777653
No 464
>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}
Probab=20.11 E-value=76 Score=19.86 Aligned_cols=21 Identities=10% Similarity=0.295 Sum_probs=17.4
Q ss_pred EEECCCChHHhhhHHHHHHhH
Q psy3441 77 MFYAPWCGFCKQLKPEFLAGR 97 (100)
Q Consensus 77 ~F~a~wC~~C~~~~p~~~~la 97 (100)
.||++-|+.|++..=.+++..
T Consensus 25 Ly~~~~SP~~~rVr~~L~e~g 45 (225)
T 4glt_A 25 LLYSNTSPYARKVRVVAAEKR 45 (225)
T ss_dssp EEECSSCHHHHHHHHHHHHHT
T ss_pred EecCCCCHHHHHHHHHHHHhC
Confidence 588999999999988777653
Done!