RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3441
(100 letters)
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 122
Score = 43.9 bits (103), Expect = 1e-07
Identities = 5/43 (11%), Positives = 12/43 (27%), Gaps = 2/43 (4%)
Query: 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLA 95
V L + K +++ ++ F K +
Sbjct: 3 GCVDL-DELSFEKTVERF-PYSVVKFDIASPYGEKHEAFTAFS 43
>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo
sapiens) [TaxId: 9606]}
Length = 137
Score = 41.7 bits (97), Expect = 1e-06
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 54 VVHLPTPQALNKLLKKET-RPVLIMFYAPWCGFCKQLKPEF 93
+ HL +++ + E R V+I F W C ++
Sbjct: 4 LPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVL 44
>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]}
Length = 108
Score = 37.8 bits (87), Expect = 2e-05
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEF 93
++HL T + + + K +L+ F+A WCG CK + P
Sbjct: 4 IIHL-TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPIL 42
>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId:
1167]}
Length = 108
Score = 36.7 bits (84), Expect = 6e-05
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 51 AQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQ 88
++ V+ + T + K +PVL+ F+A WCG C+
Sbjct: 1 SKGVITI-TDAEFESEVLKAEQPVLVYFWASWCGPCQL 37
>d1meka_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human
(Homo sapiens) [TaxId: 9606]}
Length = 120
Score = 36.7 bits (84), Expect = 7e-05
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 42 DIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQ 88
D P EED V+ L + L + +L+ FYAPWCG CK
Sbjct: 1 DAPEEEDH----VLVL-RKSNFAEALAAH-KYLLVEFYAPWCGHCKA 41
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like
protein {Archaeon Methanobacterium thermoautotrophicum
[TaxId: 145262]}
Length = 85
Score = 35.8 bits (82), Expect = 8e-05
Identities = 4/20 (20%), Positives = 8/20 (40%)
Query: 74 VLIMFYAPWCGFCKQLKPEF 93
+ +F +P C +C
Sbjct: 4 NIEVFTSPTCPYCPMAIEVV 23
>d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29,
N-terminal domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 122
Score = 36.5 bits (84), Expect = 9e-05
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 52 QAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEFLA 95
+ + L K++ K + VL+ F + KQ + + LA
Sbjct: 4 KGALPL-DTVTFYKVIPKS-KFVLVKFDTQYPYGEKQDEFKRLA 45
>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing
protein C330018D20Rik {Mouse (Mus musculus) [TaxId:
10090]}
Length = 100
Score = 35.9 bits (82), Expect = 1e-04
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 73 PVLIMFYAPWCGFCKQLKP 91
PVL +F C C + K
Sbjct: 17 PVLTLFTKAPCPLCDEAKE 35
>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein
Bta {Streptococcus pneumoniae [TaxId: 1313]}
Length = 115
Score = 35.3 bits (80), Expect = 3e-04
Identities = 5/48 (10%), Positives = 13/48 (27%), Gaps = 1/48 (2%)
Query: 46 EEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEF 93
E+ + + T + L + C +C++
Sbjct: 2 EQFLDNIKDLEVTTVVRAQEALD-KKETATFFIGRKTCPYCRKFAGTL 48
>d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 140
Score = 35.2 bits (80), Expect = 4e-04
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 42 DIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEF 93
+I +D S V L + ++++ + VL+++YAPWCG CK+L P +
Sbjct: 5 EIFENQDSS---VFQL-VGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTY 52
>d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE
{Escherichia coli [TaxId: 562]}
Length = 132
Score = 34.6 bits (79), Expect = 5e-04
Identities = 3/28 (10%), Positives = 5/28 (17%)
Query: 66 LLKKETRPVLIMFYAPWCGFCKQLKPEF 93
L + VL+
Sbjct: 31 LTQAPDGVVLLSSDPKRTPEVSDNPVMI 58
>d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 34.4 bits (78), Expect = 6e-04
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 65 KLLKKETRPVLIMFYAPWCGFCKQLKPEF 93
K P++++ + WCG CK LKP+F
Sbjct: 19 KEAAASGLPLMVIIHKSWCGACKALKPKF 47
>d2djja1 c.47.1.2 (A:6-121) Protein disulfide isomerase, PDI
{Fungi (Humicola insolens) [TaxId: 34413]}
Length = 116
Score = 34.0 bits (77), Expect = 8e-04
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 55 VHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEF 93
V + + N+++ +T+ VLI FYAPWCG CK L P++
Sbjct: 4 VTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKY 42
>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 114
Score = 33.7 bits (76), Expect = 8e-04
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 54 VVHLPTPQALNKLLKK---ETRPVLIMFYAPWCGFCKQ 88
V+ T + N+ L+K V++ F A WCG C+
Sbjct: 8 VIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRF 45
>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 112
Score = 33.3 bits (75), Expect = 0.001
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 54 VVHLPTPQALNKLL---KKETRPVLIMFYAPWCGFCKQ 88
V+ + + A + L K+E +P+++ F A WCG CK
Sbjct: 4 VIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKM 41
>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin F [TaxId: 3562]}
Length = 112
Score = 33.2 bits (75), Expect = 0.002
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEF 93
V + + +PV++ + WCG CK + P++
Sbjct: 8 VTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKY 47
>d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE
{Salmonella typhimurium [TaxId: 90371]}
Length = 119
Score = 32.7 bits (74), Expect = 0.002
Identities = 1/28 (3%), Positives = 5/28 (17%)
Query: 66 LLKKETRPVLIMFYAPWCGFCKQLKPEF 93
+ + +L+
Sbjct: 25 IKRVGDGVILLSSDPRRTPEVSDNPVMI 52
>d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV
{Bacillus subtilis [TaxId: 1423]}
Length = 143
Score = 33.0 bits (74), Expect = 0.002
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 72 RPVLIMFYAPWCGFCKQ 88
+P LI F++ C CK+
Sbjct: 30 KPTLIHFWSISCHLCKE 46
>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 107
Score = 32.2 bits (72), Expect = 0.004
Identities = 6/30 (20%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 65 KLLKKETRPVLI-MFYAPWCGFCKQLKPEF 93
+ ++ + V I +F P C +C
Sbjct: 8 QAIRNIDQDVRILVFVTPTCPYCPLAVRMA 37
>d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 124
Score = 32.1 bits (72), Expect = 0.004
Identities = 8/52 (15%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Query: 42 DIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEF 93
D P + V+++ + + KK + ++++ P K + +F
Sbjct: 3 DFPEYDGVDR--VINV-NAKNYKNVFKKY-EVLALLYHEPPED-DKASQRQF 49
>d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 31.7 bits (71), Expect = 0.005
Identities = 7/37 (18%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 53 AVVHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQ 88
V + + L +R ++ F CG C +
Sbjct: 2 GVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLR 38
>d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 31.6 bits (71), Expect = 0.005
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 54 VVHLPTPQALNKLLKK-ETRPVLIMFYAPWCGFCKQLKPEF 93
V + + A + L + V++ F A WCG CK +KP F
Sbjct: 2 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFF 42
>d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId:
5691]}
Length = 113
Score = 31.7 bits (71), Expect = 0.005
Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQ 88
+VV + + + ++ ++ + F A WCG CK
Sbjct: 9 SVVDVYSVEQFRNIMSED-ILTVAWFTAVWCGPCKT 43
>d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 107
Score = 31.4 bits (70), Expect = 0.005
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 59 TPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEF 93
++ + + PVL+ F+APWCG C+ + P
Sbjct: 7 NDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVV 41
>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like
protein {Archaeon Methanococcus jannaschii [TaxId:
2190]}
Length = 85
Score = 31.1 bits (69), Expect = 0.006
Identities = 5/23 (21%), Positives = 10/23 (43%)
Query: 71 TRPVLIMFYAPWCGFCKQLKPEF 93
++ + +F +P C C K
Sbjct: 2 SKVKIELFTSPMCPHCPAAKRVV 24
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide
reductase MsrA/MsrB, N-terminal domain {Neisseria
meningitidis serogroup A [TaxId: 65699]}
Length = 143
Score = 31.4 bits (70), Expect = 0.007
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 65 KLLKKETRPVLIMFYAPWCGFCKQLKPEF 93
+ K+ +P LI F+A WC C +
Sbjct: 17 SVYLKKDKPTLIKFWASWCPLCLSELGQT 45
>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7
{Human (Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 31.3 bits (70), Expect = 0.009
Identities = 3/26 (11%), Positives = 10/26 (38%)
Query: 68 KKETRPVLIMFYAPWCGFCKQLKPEF 93
+ + + ++I C+ L +
Sbjct: 39 QMQNKWLMINIQNVQDFACQCLNRDV 64
>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus
tremula), thioredoxin H [TaxId: 113636]}
Length = 113
Score = 30.9 bits (69), Expect = 0.009
Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 53 AVVHLPTPQALNKLL---KKETRPVLIMFYAPWCGFCKQ 88
V+ T + K + +++ F A WC CK
Sbjct: 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKM 43
>d1z6na1 c.47.1.1 (A:1-166) Hypothetical protein PA1234
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 166
Score = 30.3 bits (67), Expect = 0.023
Identities = 10/72 (13%), Positives = 25/72 (34%), Gaps = 4/72 (5%)
Query: 23 YERKETVSAFVNFLKDP-KGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMFYAP 81
++ E +AFV +G + + + + L ++ ++ L++
Sbjct: 8 FDIGEDFAAFVGHGLATEQGAVARFRQKLESNGLPSALTERLQRIERR---YRLLVAGEM 64
Query: 82 WCGFCKQLKPEF 93
WC C+
Sbjct: 65 WCPDCQINLAAL 76
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase
subunit F (AhpF), N-terminal domain {Salmonella
typhimurium [TaxId: 90371]}
Length = 96
Score = 29.7 bits (66), Expect = 0.024
Identities = 4/31 (12%), Positives = 10/31 (32%)
Query: 63 LNKLLKKETRPVLIMFYAPWCGFCKQLKPEF 93
L ++ + +Y+ C C +
Sbjct: 7 LEQIRDIDGDFEFETYYSLSCHNCPDVVQAL 37
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 217
Score = 30.0 bits (67), Expect = 0.026
Identities = 8/42 (19%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 54 VVHLPTPQALNKLLKKE--TRPVLIMFYAPWCGFCKQLKPEF 93
V L T + + ++KE +++ Y C L
Sbjct: 101 VYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSL 142
>d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin M [TaxId: 3562]}
Length = 104
Score = 29.1 bits (64), Expect = 0.037
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 59 TPQALNKLLKKETRPVLIMFYAPWCGFCKQLKPEF 93
+ + + + PV++ F+APWCG CK + P
Sbjct: 5 NDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVI 39
>d1xwaa_ c.47.1.1 (A:) Thioredoxin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 111
Score = 29.1 bits (64), Expect = 0.050
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 50 SAQAVVHLPTPQALNKLLKKET-RPVLIMFYAPWCGFCKQ 88
+A V + L+ L K + + V++ F+A WCG CK
Sbjct: 3 AAAMVYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKM 42
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY,
DsbE) {Escherichia coli [TaxId: 562]}
Length = 136
Score = 28.8 bits (63), Expect = 0.075
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 72 RPVLIMFYAPWCGFCKQ 88
+PVL+ +A WC +
Sbjct: 21 KPVLLNVWATWCPTSRA 37
>d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus
acidocaldarius, formerly Bacillus acidocaldarius
[TaxId: 405212]}
Length = 105
Score = 27.1 bits (59), Expect = 0.25
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQ 88
A + L T + ++ + +PVL+ F+A WCG C+
Sbjct: 1 ATMTL-TDANFQQAIQGD-KPVLVDFWAAWCGPCRM 34
>d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 119
Score = 26.4 bits (57), Expect = 0.47
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 53 AVVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQ 88
AVV L + N+ ++ VL F+APWCG CK
Sbjct: 11 AVVKL-ATDSFNEYIQSH-DLVLAEFFAPWCGHCKN 44
>d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 103
Score = 25.9 bits (56), Expect = 0.58
Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 54 VVHLPTPQALNKLLKKETRPVLIMFYAPWCGFCKQ 88
V + + + ++ + V++ F+A WCG CK+
Sbjct: 2 VKIVTSQAEFDSIISQN-ELVIVDFFAEWCGPCKR 35
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin
{Corynebacterium ammoniagenes [TaxId: 1697]}
Length = 74
Score = 25.4 bits (55), Expect = 0.75
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 75 LIMFYAPWCGFCKQLK 90
+ ++ P C C K
Sbjct: 3 ITLYTKPACVQCTATK 18
>d7ahla_ f.6.1.1 (A:) Alpha-hemolysin {Staphylococcus aureus
[TaxId: 1280]}
Length = 293
Score = 25.6 bits (56), Expect = 1.0
Identities = 4/31 (12%), Positives = 8/31 (25%)
Query: 12 KHYKDGEFNKNYERKETVSAFVNFLKDPKGD 42
+ E F +F+ D +
Sbjct: 19 TVKTGDLVTYDKENGMHKKVFYSFIDDKNHN 49
>d1i5ga_ c.47.1.10 (A:) Tryparedoxin II {Crithidia fasciculata
[TaxId: 5656]}
Length = 144
Score = 25.2 bits (54), Expect = 1.4
Identities = 5/17 (29%), Positives = 7/17 (41%)
Query: 72 RPVLIMFYAPWCGFCKQ 88
+ V F A WC +
Sbjct: 29 KTVFFYFSASWCPPSRA 45
>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of
Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}
Length = 74
Score = 24.5 bits (53), Expect = 1.4
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 76 IMFYAPWCGFCKQLK 90
+F P C FC + K
Sbjct: 8 SIFTKPGCPFCAKAK 22
>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC,
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 156
Score = 25.2 bits (54), Expect = 1.6
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 69 KETRPVLIMFYAPWCGFCKQLKPEF 93
+ + V+ +F CG+C +L +
Sbjct: 24 PQEKHVITVFTDITCGYCHKLHEQM 48
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia
coli [TaxId: 562]}
Length = 76
Score = 24.3 bits (52), Expect = 1.8
Identities = 3/19 (15%), Positives = 6/19 (31%)
Query: 75 LIMFYAPWCGFCKQLKPEF 93
+ ++ C C K
Sbjct: 3 ITIYTRNDCVQCHATKRAM 21
>d1a41a_ d.163.1.2 (A:) Eukaryotic DNA topoisomerase I, catalytic
core {Vaccinia virus [TaxId: 10245]}
Length = 230
Score = 24.5 bits (53), Expect = 2.3
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 8 PYVIKHYKDGEFNKNYERKETVSAFVNFLKD 38
+++ KD F K T F++ + D
Sbjct: 197 TTILEMVKDKNFLD-VVSKTTFDEFLSIVVD 226
>d1t3ba1 c.47.1.9 (A:61-210) Disulfide bond isomerase, DsbC,
C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Length = 150
Score = 24.4 bits (52), Expect = 2.3
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 69 KETRPVLIMFYAPWCGFCKQLKPEF 93
K + V+ +F C +C L +
Sbjct: 24 KNEKHVVTVFMDITCHYCHLLHQQL 48
>d1woua_ c.47.1.16 (A:) Putative 42-9-9 protein (thioredoxin
containing protein Txnl5) {Human (Homo sapiens) [TaxId:
9606]}
Length = 119
Score = 24.4 bits (52), Expect = 2.5
Identities = 7/47 (14%), Positives = 17/47 (36%), Gaps = 8/47 (17%)
Query: 55 VHLPTPQALNKLLKK-ETRPVLIMFYA-------PWCGFCKQLKPEF 93
V + + ++ +++ + + F WC C Q +P
Sbjct: 4 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVV 50
>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)
{Escherichia coli [TaxId: 562]}
Length = 85
Score = 23.8 bits (51), Expect = 3.1
Identities = 4/15 (26%), Positives = 8/15 (53%)
Query: 76 IMFYAPWCGFCKQLK 90
++F C +C + K
Sbjct: 4 VIFGRSGCPYCVRAK 18
>d1rypi_ d.153.1.4 (I:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 222
Score = 24.4 bits (52), Expect = 3.3
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 2 KVEVNLPYVIKHYKDGEFNKNYERKETVSAFVNFLKDPKGDIPW 45
V+V V++ KD E+ +NY K P+G
Sbjct: 172 NVDV---CVMEIGKDAEYLRNYLTPNVREEKQKSYKFPRGTTAV 212
>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 105
Score = 23.9 bits (51), Expect = 3.4
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 76 IMFYAPWCGFCKQLK 90
++F P C FC++ +
Sbjct: 15 VVFIKPTCPFCRKTQ 29
>d2ar0a1 c.66.1.45 (A:6-529) M.EcoKI {Escherichia coli [TaxId: 562]}
Length = 524
Score = 24.5 bits (52), Expect = 3.5
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 7/63 (11%)
Query: 15 KDGEFNKNYERKETVSAFVNFLKDP-------KGDIPWEEDESAQAVVHLPTPQALNKLL 67
D E NKN ++ S + F ++ DI W +D+ + LP P L
Sbjct: 427 ADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKDSIDADSLPEPDVLAAEA 486
Query: 68 KKE 70
E
Sbjct: 487 MGE 489
>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)
{Escherichia coli, Grx3 [TaxId: 562]}
Length = 82
Score = 23.4 bits (50), Expect = 3.5
Identities = 3/14 (21%), Positives = 7/14 (50%)
Query: 77 MFYAPWCGFCKQLK 90
++ C +C + K
Sbjct: 5 IYTKETCPYCHRAK 18
>d1wdda2 d.58.9.1 (A:11-150) Ribulose 1,5-bisphosphate
carboxylase-oxygenase {Rice (Oryza sativa) [TaxId:
4530]}
Length = 140
Score = 23.5 bits (51), Expect = 4.9
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 11 IKHYKDGEFNKNYERKETVSAFVNFLKDPKGDIPWEEDESAQAV 54
+K YK + YE K+T F P+ +P E E+ AV
Sbjct: 7 VKDYKLTYYTPEYETKDTD-ILAAFRVTPQPGVPPE--EAGAAV 47
>d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]}
Length = 350
Score = 23.6 bits (50), Expect = 5.4
Identities = 2/21 (9%), Positives = 9/21 (42%)
Query: 19 FNKNYERKETVSAFVNFLKDP 39
F++ + K+ ++ +
Sbjct: 327 FDRKLQPKDAYFRLLDLKRLE 347
>d1ozja_ d.164.1.1 (A:) SMAD MH1 domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 126
Score = 23.2 bits (50), Expect = 6.4
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Query: 40 KGDIPWEEDESAQAVVHLPTPQALNKLLKKET 71
KG+ +E++ + V +L K LKK
Sbjct: 14 KGEQNGQEEKWCEKAVK-----SLVKKLKKTG 40
>d1ogla_ a.204.1.1 (A:) Type II deoxyuridine triphosphatase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 270
Score = 23.3 bits (49), Expect = 7.1
Identities = 8/46 (17%), Positives = 15/46 (32%)
Query: 14 YKDGEFNKNYERKETVSAFVNFLKDPKGDIPWEEDESAQAVVHLPT 59
YK+G + K E E ++ + E +A +
Sbjct: 201 YKEGVYVKVREGVEDNELLHECVQSVSVEDVLNEGTYLKAWEKIAC 246
>d1jdla_ a.3.1.1 (A:) Cytochrome c2 {Rhodospirillum centenum [TaxId:
34018]}
Length = 118
Score = 23.1 bits (49), Expect = 7.5
Identities = 7/47 (14%), Positives = 20/47 (42%)
Query: 32 FVNFLKDPKGDIPWEEDESAQAVVHLPTPQALNKLLKKETRPVLIMF 78
+ +L DP + ++ A + + + KL ++ R ++ +
Sbjct: 66 IIAYLPDPNAFLRKFLADAGHAEQAKGSTKMVFKLPDEQERKDVVAY 112
>d2f8aa1 c.47.1.10 (A:12-195) Glutathione peroxidase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 184
Score = 23.0 bits (48), Expect = 7.7
Identities = 4/17 (23%), Positives = 7/17 (41%)
Query: 72 RPVLIMFYAPWCGFCKQ 88
+ +LI A G +
Sbjct: 25 KVLLIENVASLGGTTVR 41
>d1hdia_ c.86.1.1 (A:) Phosphoglycerate kinase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 413
Score = 23.1 bits (49), Expect = 8.1
Identities = 4/22 (18%), Positives = 10/22 (45%), Gaps = 3/22 (13%)
Query: 56 HLPTPQALNKLLKKETRPVLIM 77
+P+ + L + V++M
Sbjct: 39 AVPS---IKFCLDDGAKSVVLM 57
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.138 0.431
Gapped
Lambda K H
0.267 0.0609 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 393,732
Number of extensions: 16088
Number of successful extensions: 119
Number of sequences better than 10.0: 1
Number of HSP's gapped: 119
Number of HSP's successfully gapped: 72
Length of query: 100
Length of database: 2,407,596
Length adjustment: 62
Effective length of query: 38
Effective length of database: 1,556,336
Effective search space: 59140768
Effective search space used: 59140768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.1 bits)