Query psy3448
Match_columns 154
No_of_seqs 116 out of 719
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 16:56:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3448.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3448hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dqv_A Probable peptide synthe 97.8 3.5E-05 1.2E-09 65.3 6.8 95 4-103 273-378 (478)
2 3st7_A Capsular polysaccharide 96.7 0.0017 5.7E-08 52.5 5.1 90 4-105 127-217 (369)
3 3m2p_A UDP-N-acetylglucosamine 96.5 0.0085 2.9E-07 46.9 7.5 89 4-106 157-245 (311)
4 1i24_A Sulfolipid biosynthesis 96.5 0.0056 1.9E-07 49.6 6.5 95 4-103 216-320 (404)
5 3enk_A UDP-glucose 4-epimerase 96.4 0.016 5.4E-07 45.7 8.6 99 4-106 178-286 (341)
6 1gy8_A UDP-galactose 4-epimera 96.3 0.02 6.8E-07 46.2 8.8 100 4-105 199-326 (397)
7 3slg_A PBGP3 protein; structur 96.2 0.0096 3.3E-07 47.8 6.3 100 4-106 195-295 (372)
8 3ruf_A WBGU; rossmann fold, UD 96.1 0.012 4.2E-07 46.6 6.6 95 4-106 199-293 (351)
9 4b8w_A GDP-L-fucose synthase; 96.0 0.017 5.8E-07 44.5 6.7 94 4-106 166-264 (319)
10 4egb_A DTDP-glucose 4,6-dehydr 95.9 0.024 8.2E-07 44.8 7.4 89 4-106 198-286 (346)
11 3ehe_A UDP-glucose 4-epimerase 95.8 0.026 9E-07 44.1 7.3 88 4-106 162-250 (313)
12 2q1s_A Putative nucleotide sug 95.8 0.02 6.8E-07 46.2 6.7 94 4-105 205-305 (377)
13 4f6l_B AUSA reductase domain p 95.7 0.021 7.1E-07 48.3 6.8 90 4-104 332-424 (508)
14 2bll_A Protein YFBG; decarboxy 95.6 0.029 1E-06 44.1 6.8 99 4-105 172-271 (345)
15 4f6c_A AUSA reductase domain p 95.5 0.021 7.2E-07 47.0 5.7 90 4-103 251-342 (427)
16 1rkx_A CDP-glucose-4,6-dehydra 95.4 0.028 9.4E-07 44.8 6.2 95 4-105 190-284 (357)
17 3vps_A TUNA, NAD-dependent epi 95.4 0.07 2.4E-06 41.3 8.2 86 4-105 168-253 (321)
18 2c20_A UDP-glucose 4-epimerase 95.3 0.1 3.5E-06 40.8 9.1 98 4-105 166-272 (330)
19 1orr_A CDP-tyvelose-2-epimeras 95.3 0.04 1.4E-06 43.3 6.6 93 4-105 189-288 (347)
20 3ko8_A NAD-dependent epimerase 95.0 0.079 2.7E-06 41.1 7.4 93 4-107 161-254 (312)
21 3ius_A Uncharacterized conserv 94.9 0.1 3.6E-06 39.9 7.9 81 4-106 148-228 (286)
22 1sb8_A WBPP; epimerase, 4-epim 94.9 0.072 2.5E-06 42.3 7.1 92 4-104 201-293 (352)
23 3sxp_A ADP-L-glycero-D-mannohe 94.8 0.047 1.6E-06 43.6 5.9 91 4-105 183-273 (362)
24 1e6u_A GDP-fucose synthetase; 94.7 0.054 1.8E-06 42.2 5.8 96 4-105 160-265 (321)
25 3gpi_A NAD-dependent epimerase 94.3 0.15 5.3E-06 39.1 7.6 83 4-106 151-233 (286)
26 2c5a_A GDP-mannose-3', 5'-epim 94.2 0.16 5.3E-06 41.0 7.6 91 4-105 200-291 (379)
27 1ek6_A UDP-galactose 4-epimera 94.1 0.22 7.7E-06 39.1 8.2 98 4-105 182-289 (348)
28 2b69_A UDP-glucuronate decarbo 94.0 0.15 5.1E-06 40.2 7.1 89 4-105 194-282 (343)
29 2v6g_A Progesterone 5-beta-red 94.0 0.078 2.7E-06 42.0 5.4 92 4-105 175-271 (364)
30 1r6d_A TDP-glucose-4,6-dehydra 93.9 0.17 6E-06 39.6 7.2 88 4-105 175-262 (337)
31 2hun_A 336AA long hypothetical 93.7 0.22 7.6E-06 38.9 7.5 89 4-106 175-263 (336)
32 1oc2_A DTDP-glucose 4,6-dehydr 93.7 0.2 7E-06 39.3 7.3 88 4-105 185-272 (348)
33 1rpn_A GDP-mannose 4,6-dehydra 93.6 0.15 5E-06 39.9 6.3 65 34-106 212-277 (335)
34 4b4o_A Epimerase family protei 93.6 0.2 6.9E-06 38.7 7.0 57 43-106 182-238 (298)
35 4id9_A Short-chain dehydrogena 93.5 0.098 3.4E-06 41.2 5.1 67 33-105 222-292 (347)
36 1eq2_A ADP-L-glycero-D-mannohe 93.2 0.12 4.3E-06 39.7 5.2 90 4-105 164-255 (310)
37 2x6t_A ADP-L-glycero-D-manno-h 92.9 0.25 8.4E-06 39.2 6.6 90 4-105 211-302 (357)
38 3oh8_A Nucleoside-diphosphate 92.8 0.17 5.7E-06 42.9 5.8 56 43-105 329-384 (516)
39 2yy7_A L-threonine dehydrogena 92.8 0.31 1.1E-05 37.5 6.9 94 4-105 167-261 (312)
40 1kew_A RMLB;, DTDP-D-glucose 4 92.6 0.36 1.2E-05 38.1 7.2 88 4-105 191-278 (361)
41 1udb_A Epimerase, UDP-galactos 92.5 0.4 1.4E-05 37.5 7.3 56 46-105 226-281 (338)
42 1z7e_A Protein aRNA; rossmann 92.1 0.23 8E-06 43.3 6.0 99 4-105 487-586 (660)
43 2pk3_A GDP-6-deoxy-D-LYXO-4-he 91.4 0.83 2.9E-05 35.3 7.9 58 42-106 212-269 (321)
44 3ajr_A NDP-sugar epimerase; L- 91.3 0.52 1.8E-05 36.4 6.7 94 4-105 161-255 (317)
45 3sc6_A DTDP-4-dehydrorhamnose 91.3 0.63 2.2E-05 35.5 7.1 84 4-106 150-233 (287)
46 1z45_A GAL10 bifunctional prot 91.0 0.62 2.1E-05 40.7 7.5 58 46-105 241-300 (699)
47 1db3_A GDP-mannose 4,6-dehydra 90.9 0.56 1.9E-05 37.1 6.6 62 36-105 208-270 (372)
48 2ydy_A Methionine adenosyltran 90.8 1.2 4.1E-05 34.3 8.3 92 4-106 153-245 (315)
49 1n2s_A DTDP-4-, DTDP-glucose o 90.5 0.72 2.5E-05 35.3 6.7 88 4-105 148-235 (299)
50 1t2a_A GDP-mannose 4,6 dehydra 88.5 0.87 3E-05 36.2 6.0 56 42-105 239-294 (375)
51 2q1w_A Putative nucleotide sug 88.4 0.72 2.5E-05 36.2 5.4 54 43-105 212-265 (333)
52 2x4g_A Nucleoside-diphosphate- 87.3 1.1 3.7E-05 34.9 5.8 82 4-105 178-260 (342)
53 2pzm_A Putative nucleotide sug 86.8 1.2 4E-05 34.9 5.7 55 42-105 208-263 (330)
54 3i6i_A Putative leucoanthocyan 86.7 1.2 4E-05 35.1 5.7 61 40-105 182-242 (346)
55 1vl0_A DTDP-4-dehydrorhamnose 86.4 1.8 6.1E-05 32.9 6.5 82 4-105 157-238 (292)
56 1n7h_A GDP-D-mannose-4,6-dehyd 86.4 1.5 5E-05 34.9 6.2 56 42-105 244-299 (381)
57 2z1m_A GDP-D-mannose dehydrata 86.2 1.6 5.3E-05 33.9 6.1 57 42-106 210-266 (345)
58 2hrz_A AGR_C_4963P, nucleoside 84.8 2.1 7.4E-05 33.3 6.3 66 36-105 218-283 (342)
59 2ggs_A 273AA long hypothetical 82.7 3.2 0.00011 31.0 6.4 48 50-106 180-227 (273)
60 2p5y_A UDP-glucose 4-epimerase 82.5 4 0.00014 31.3 7.0 52 45-105 209-260 (311)
61 2jl1_A Triphenylmethane reduct 76.7 5.5 0.00019 30.0 6.0 56 44-105 163-218 (287)
62 1xgk_A Nitrogen metabolite rep 76.1 4.6 0.00016 32.2 5.6 65 37-106 172-238 (352)
63 2zcu_A Uncharacterized oxidore 73.7 8.9 0.0003 28.7 6.4 56 44-105 159-214 (286)
64 3e48_A Putative nucleoside-dip 73.1 6 0.00021 29.9 5.4 56 43-105 161-216 (289)
65 1y1p_A ARII, aldehyde reductas 73.1 6.4 0.00022 30.2 5.6 91 4-106 202-292 (342)
66 1qyd_A Pinoresinol-lariciresin 68.7 6.3 0.00021 30.1 4.6 59 42-105 183-241 (313)
67 1xq6_A Unknown protein; struct 59.6 6.8 0.00023 28.6 3.1 51 51-105 200-251 (253)
68 2p4h_X Vestitone reductase; NA 59.0 17 0.00058 27.6 5.4 47 51-105 222-268 (322)
69 3nzo_A UDP-N-acetylglucosamine 57.9 40 0.0014 27.1 7.7 54 47-105 228-282 (399)
70 2gn4_A FLAA1 protein, UDP-GLCN 55.0 11 0.00038 29.7 3.8 50 46-103 211-260 (344)
71 3e8x_A Putative NAD-dependent 54.5 21 0.00072 26.0 5.1 48 46-100 187-234 (236)
72 3dqp_A Oxidoreductase YLBE; al 46.3 43 0.0015 23.9 5.7 45 48-99 166-210 (219)
73 1qyc_A Phenylcoumaran benzylic 44.7 16 0.00055 27.6 3.2 59 42-105 178-236 (308)
74 3c1o_A Eugenol synthase; pheny 42.7 30 0.001 26.3 4.5 59 42-105 178-236 (321)
75 2gas_A Isoflavone reductase; N 40.4 26 0.0009 26.3 3.8 59 42-105 177-235 (307)
76 2a35_A Hypothetical protein PA 39.6 13 0.00044 26.5 1.7 37 50-94 176-212 (215)
77 2r6j_A Eugenol synthase 1; phe 32.7 39 0.0013 25.6 3.7 59 42-105 177-235 (318)
78 2wm3_A NMRA-like family domain 27.5 77 0.0026 23.7 4.5 54 46-105 181-234 (299)
79 3ny5_A Serine/threonine-protei 27.2 13 0.00044 24.9 -0.0 59 36-95 12-71 (96)
80 3dhn_A NAD-dependent epimerase 21.2 70 0.0024 22.7 3.0 38 51-94 189-226 (227)
No 1
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=97.80 E-value=3.5e-05 Score=65.28 Aligned_cols=95 Identities=13% Similarity=0.231 Sum_probs=64.9
Q ss_pred ccccceEEcccC----CCccceeccCCchhhhhhhhccCce-eeeecCC------CCccccchHHHHHHHHHHHhhhhhh
Q psy3448 4 SGLHILVVSTYR----EPVRGWIDNVYGPVGLMVGIGTGVL-HTYQYDQ------DAVTEMVPVDMVVNSVIATAWYTAK 72 (154)
Q Consensus 4 ~~RPSIV~~a~~----EP~pGWiDn~~G~~gl~~~~g~G~l-r~~~~~~------~~~~D~VPvD~vvn~li~aa~~~~~ 72 (154)
.+||+.|.+.-+ .+..+|+..+ +......|.. +.++++. +...|.||||.|+++++.++.....
T Consensus 273 ivRpg~v~G~~~~~g~~~~~~~~~~l-----~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~ 347 (478)
T 4dqv_A 273 VFRCGMILADTSYAGQLNMSDWVTRM-----VLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAG 347 (478)
T ss_dssp EEEECEEECCSSSSSCCCTTBHHHHH-----HHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-
T ss_pred EEECceeeCCCccCCcCCHHHHHHHH-----HHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhccc
Confidence 589999987432 2445555443 1123344665 3333332 7889999999999999998865432
Q ss_pred ccCCCcCEEEeecCCCCcccHHHHHHHHHhc
Q psy3448 73 SNQQQIPIYNYVSSVQKPVTWNEFLQHNIKH 103 (154)
Q Consensus 73 ~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~ 103 (154)
.+...-.+||+++...+|+||.|+.+...++
T Consensus 348 ~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 348 SSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred CCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 2223456999999877789999999999985
No 2
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=96.74 E-value=0.0017 Score=52.46 Aligned_cols=90 Identities=12% Similarity=-0.001 Sum_probs=63.5
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhh-hccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVG-IGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYN 82 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~-~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~ 82 (154)
.+||+.|.+..++|- .++....++. ...|. .....+++...++|++|-++++++.++...... ...+||
T Consensus 127 i~R~~~v~G~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~---~~~~~~ 196 (369)
T 3st7_A 127 IYRWPNLFGKWCKPN------YNSVIATFCYKIARNE-EIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTI---ENGVPT 196 (369)
T ss_dssp EEEECEEECTTCCTT------SSCHHHHHHHHHHTTC-CCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCE---ETTEEC
T ss_pred EEECCceeCCCCCCC------cchHHHHHHHHHHcCC-CeEecCCCeEEEEEEHHHHHHHHHHHHhCCccc---CCceEE
Confidence 589999999877763 3344443333 22333 333458899999999999999999887532211 146999
Q ss_pred eecCCCCcccHHHHHHHHHhcCc
Q psy3448 83 YVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 83 ~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
++++ .++|++|+.+...+...
T Consensus 197 i~~~--~~~s~~e~~~~~~~~~g 217 (369)
T 3st7_A 197 VPNV--FKVTLGEIVDLLYKFKQ 217 (369)
T ss_dssp CSCC--EEEEHHHHHHHHHHHHH
T ss_pred eCCC--CceeHHHHHHHHHHHhC
Confidence 9876 68999999999887644
No 3
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.47 E-value=0.0085 Score=46.94 Aligned_cols=89 Identities=13% Similarity=-0.063 Sum_probs=64.4
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+..+.+- +-...++-....|..-.++++++...+.|.+|=++++++.++-.. ..-.+||+
T Consensus 157 ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~-----~~~~~~~i 224 (311)
T 3m2p_A 157 NLRFAHLYGFNEKNN-------YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQE-----KVSGTFNI 224 (311)
T ss_dssp EEEECEEECSCC--C-------CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCT-----TCCEEEEE
T ss_pred EEeeCceeCcCCCCC-------CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcC-----CCCCeEEe
Confidence 579998887655443 122334444555666677789999999999999999988876321 13469999
Q ss_pred ecCCCCcccHHHHHHHHHhcCcc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
+++ .++|+.|+.+...+...+
T Consensus 225 ~~~--~~~s~~e~~~~i~~~~g~ 245 (311)
T 3m2p_A 225 GSG--DALTNYEVANTINNAFGN 245 (311)
T ss_dssp CCS--CEECHHHHHHHHHHHTTC
T ss_pred CCC--CcccHHHHHHHHHHHhCC
Confidence 887 579999999999887654
No 4
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=96.46 E-value=0.0056 Score=49.56 Aligned_cols=95 Identities=13% Similarity=0.021 Sum_probs=65.6
Q ss_pred ccccceEEcccCCC---ccceeccCC------c-hhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhc
Q psy3448 4 SGLHILVVSTYREP---VRGWIDNVY------G-PVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKS 73 (154)
Q Consensus 4 ~~RPSIV~~a~~EP---~pGWiDn~~------G-~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~ 73 (154)
.+||+.|.+..+.+ -|+|++... + ...++.....|..-.++++.+...|+|.||=|+++++.++-....
T Consensus 216 ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~- 294 (404)
T 1i24_A 216 DLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK- 294 (404)
T ss_dssp EEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC-
T ss_pred EEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCccc-
Confidence 58999998876655 456665442 1 233444444555445778888999999999999999887632110
Q ss_pred cCCCcCEEEeecCCCCcccHHHHHHHHHhc
Q psy3448 74 NQQQIPIYNYVSSVQKPVTWNEFLQHNIKH 103 (154)
Q Consensus 74 ~~~~~~VY~~~ss~~np~t~~~~~~~~~~~ 103 (154)
.+...+||+++ .++|+.|+.+.+.+.
T Consensus 295 -~g~~~~yni~~---~~~s~~e~~~~i~~~ 320 (404)
T 1i24_A 295 -AGEFRVFNQFT---EQFSVNELASLVTKA 320 (404)
T ss_dssp -TTCEEEEEECS---EEEEHHHHHHHHHHH
T ss_pred -CCCceEEEECC---CCCcHHHHHHHHHHH
Confidence 01125999976 479999999999875
No 5
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=96.38 E-value=0.016 Score=45.75 Aligned_cols=99 Identities=11% Similarity=-0.050 Sum_probs=65.8
Q ss_pred ccccceEEcccCCCccceeccC--CchhhhhhhhccCc--eeeeec------CCCCccccchHHHHHHHHHHHhhhhhhc
Q psy3448 4 SGLHILVVSTYREPVRGWIDNV--YGPVGLMVGIGTGV--LHTYQY------DQDAVTEMVPVDMVVNSVIATAWYTAKS 73 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~--~G~~gl~~~~g~G~--lr~~~~------~~~~~~D~VPvD~vvn~li~aa~~~~~~ 73 (154)
.+||+.|.+.....+-|.-++- ......+.....|. .-.+++ +.+...|+|.||=++++++.++......
T Consensus 178 ~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~ 257 (341)
T 3enk_A 178 TLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERR 257 (341)
T ss_dssp EEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHH
T ss_pred EEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcC
Confidence 5799999887665555543221 22333344333332 223345 7788899999999999988887543221
Q ss_pred cCCCcCEEEeecCCCCcccHHHHHHHHHhcCcc
Q psy3448 74 NQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 74 ~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
. .-.+||++++ .++|+.|+.+.+.+...+
T Consensus 258 ~--~~~~~ni~~~--~~~s~~e~~~~i~~~~g~ 286 (341)
T 3enk_A 258 D--ASLTVNLGTG--RGYSVLEVVRAFEKASGR 286 (341)
T ss_dssp T--SCEEEEESCS--CCEEHHHHHHHHHHHHCS
T ss_pred C--cceEEEeCCC--CceeHHHHHHHHHHHhCC
Confidence 1 3469999887 579999999999876543
No 6
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=96.27 E-value=0.02 Score=46.20 Aligned_cols=100 Identities=13% Similarity=0.039 Sum_probs=63.5
Q ss_pred ccccceEEcccCCCccceecc-CCchhhhhh-----hhccCce------------eeeec------CCCCccccchHHHH
Q psy3448 4 SGLHILVVSTYREPVRGWIDN-VYGPVGLMV-----GIGTGVL------------HTYQY------DQDAVTEMVPVDMV 59 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn-~~G~~gl~~-----~~g~G~l------------r~~~~------~~~~~~D~VPvD~v 59 (154)
.+||+.|.+.......|+.++ .......++ ....|.. -.+++ +.+...|+|.||=|
T Consensus 199 ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dv 278 (397)
T 1gy8_A 199 CLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDL 278 (397)
T ss_dssp EEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHH
T ss_pred EEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHH
Confidence 579999988766555555432 233333333 3334431 23444 66788899999999
Q ss_pred HHHHHHHhhhhhhccC-CCc---CEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 60 VNSVIATAWYTAKSNQ-QQI---PIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 60 vn~li~aa~~~~~~~~-~~~---~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+++++.++-......+ ... .+||++++ .++|+.|+.+.+.+...
T Consensus 279 a~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 326 (397)
T 1gy8_A 279 ASAHILALDYVEKLGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTG 326 (397)
T ss_dssp HHHHHHHHHHHHTCCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcccccccccccCCCcEEEeCCC--CcccHHHHHHHHHHHhC
Confidence 9999887743221100 012 69999876 57999999999887643
No 7
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.16 E-value=0.0096 Score=47.76 Aligned_cols=100 Identities=9% Similarity=-0.039 Sum_probs=70.3
Q ss_pred ccccceEEcccCCCccceeccCCchhh-hhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVG-LMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYN 82 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~g-l~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~ 82 (154)
.+||+.|.+..+++.-++-+...+... ++.....|..-.++++.+...|+|.||=++++++.++-..... ..-.+||
T Consensus 195 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~--~~~~~~n 272 (372)
T 3slg_A 195 LFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGV--ATGKIYN 272 (372)
T ss_dssp EEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGT--TTTEEEE
T ss_pred EEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCc--CCCceEE
Confidence 579999988777765554444443333 3334445665667788899999999999999998887433211 1336999
Q ss_pred eecCCCCcccHHHHHHHHHhcCcc
Q psy3448 83 YVSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 83 ~~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
+++. ..++|+.|+.+.+.+...+
T Consensus 273 i~~~-~~~~s~~e~~~~i~~~~g~ 295 (372)
T 3slg_A 273 IGNP-NNNFSVRELANKMLELAAE 295 (372)
T ss_dssp ECCT-TCEEEHHHHHHHHHHHHHH
T ss_pred eCCC-CCCccHHHHHHHHHHHhCC
Confidence 9883 2579999999999876544
No 8
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.09 E-value=0.012 Score=46.65 Aligned_cols=95 Identities=15% Similarity=0.039 Sum_probs=66.0
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+..+.+-..|- .-...++.....|..-.++++++...|+|.||=++++++.++-.... ..-.+||+
T Consensus 199 ilRp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~---~~~~~~ni 272 (351)
T 3ruf_A 199 GLRYFNVFGRRQDPNGAYA---AVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDS---AKDNIYNV 272 (351)
T ss_dssp EEEECSEESTTCCCCSTTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG---GCSEEEEE
T ss_pred EEeeCceeCcCCCCCcchh---hHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccc---cCCCEEEe
Confidence 5899988886655432111 11123344445565556788999999999999999998877643111 13469999
Q ss_pred ecCCCCcccHHHHHHHHHhcCcc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
+++ .++|+.|+.+.+.+...+
T Consensus 273 ~~~--~~~s~~e~~~~i~~~~g~ 293 (351)
T 3ruf_A 273 AVG--DRTTLNELSGYIYDELNL 293 (351)
T ss_dssp SCS--CCEEHHHHHHHHHHHHHT
T ss_pred CCC--CcccHHHHHHHHHHHhCc
Confidence 887 489999999999886654
No 9
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=95.97 E-value=0.017 Score=44.52 Aligned_cols=94 Identities=10% Similarity=-0.096 Sum_probs=63.8
Q ss_pred ccccceEEcccCCCccceeccCCch-hhhhhh----hccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCc
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGP-VGLMVG----IGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQI 78 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~-~gl~~~----~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~ 78 (154)
.+||+.|.+..+.+-.+ ..+. ..++-. ...|.--.++++.+...|+|.||=++++++.++-.... ...
T Consensus 166 ilRp~~v~Gp~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~---~~~ 238 (319)
T 4b8w_A 166 AVIPTNVFGPHDNFNIE----DGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNE---VEP 238 (319)
T ss_dssp EEEECEEECTTCCCCTT----TSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCC---SSC
T ss_pred EEeeccccCCCCCCCCc----cccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhcccc---CCc
Confidence 57999988865544221 0111 112222 44565556778999999999999999999887743211 134
Q ss_pred CEEEeecCCCCcccHHHHHHHHHhcCcc
Q psy3448 79 PIYNYVSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 79 ~VY~~~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
.+||++++ .++|+.|+.+.+.+...+
T Consensus 239 ~~~ni~~~--~~~s~~e~~~~i~~~~g~ 264 (319)
T 4b8w_A 239 IILSVGEE--DEVSIKEAAEAVVEAMDF 264 (319)
T ss_dssp EEECCCGG--GCEEHHHHHHHHHHHTTC
T ss_pred eEEEecCC--CceeHHHHHHHHHHHhCC
Confidence 59999886 579999999999887653
No 10
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=95.88 E-value=0.024 Score=44.84 Aligned_cols=89 Identities=12% Similarity=-0.068 Sum_probs=62.8
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+..+.+- .-...++-....|.--.++++++...|+|.||=++++++.++-... .-.+||+
T Consensus 198 ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-----~g~~~~i 265 (346)
T 4egb_A 198 VTRCSNNYGPYQYPE-------KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-----VGEVYNI 265 (346)
T ss_dssp EEEECEEESTTCCTT-------SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-----TTCEEEE
T ss_pred EEeecceeCcCCCcc-------chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-----CCCEEEE
Confidence 578998887554331 1123344444455545567889999999999999999888763221 3359999
Q ss_pred ecCCCCcccHHHHHHHHHhcCcc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
+++ .++|+.|+.+.+.+...+
T Consensus 266 ~~~--~~~s~~e~~~~i~~~~g~ 286 (346)
T 4egb_A 266 GGN--NEKTNVEVVEQIITLLGK 286 (346)
T ss_dssp CCS--CCEEHHHHHHHHHHHHTC
T ss_pred CCC--CceeHHHHHHHHHHHhCC
Confidence 887 579999999999876543
No 11
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=95.84 E-value=0.026 Score=44.05 Aligned_cols=88 Identities=8% Similarity=0.039 Sum_probs=61.0
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccC-ceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTG-VLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYN 82 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G-~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~ 82 (154)
.+||+.|.+..+.+ |++ ..++.....| ..-..+++.+...|+|.||=++++++.++- +.....+||
T Consensus 162 ilRp~~v~G~~~~~--~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~-----~~~~~~~~n 228 (313)
T 3ehe_A 162 IYRFANVIGRRSTH--GVI------YDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR-----GDERVNIFN 228 (313)
T ss_dssp EEECSCEESTTCCC--SHH------HHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT-----CCSSEEEEE
T ss_pred EEeeccccCcCCCc--ChH------HHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc-----cCCCCceEE
Confidence 57888887754432 221 2233333333 233467888999999999999999888773 112346999
Q ss_pred eecCCCCcccHHHHHHHHHhcCcc
Q psy3448 83 YVSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 83 ~~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
++++ .++|+.|+.+.+.+....
T Consensus 229 i~~~--~~~s~~e~~~~i~~~~g~ 250 (313)
T 3ehe_A 229 IGSE--DQIKVKRIAEIVCEELGL 250 (313)
T ss_dssp CCCS--CCEEHHHHHHHHHHHTTC
T ss_pred ECCC--CCeeHHHHHHHHHHHhCC
Confidence 9887 579999999999887654
No 12
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=95.81 E-value=0.02 Score=46.24 Aligned_cols=94 Identities=14% Similarity=0.059 Sum_probs=62.7
Q ss_pred ccccceEEcccCCCccc-eeccC----Cc-hhhhhhhhccCceeeeecCCCCccccchHHHHHHH-HHHHhhhhhhccCC
Q psy3448 4 SGLHILVVSTYREPVRG-WIDNV----YG-PVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNS-VIATAWYTAKSNQQ 76 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pG-WiDn~----~G-~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~-li~aa~~~~~~~~~ 76 (154)
.+||+.|.+..+++.+| |..+. .+ ...++.....|..-.++++.+...|+|.||=++++ ++.++-. . .
T Consensus 205 ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~-~----~ 279 (377)
T 2q1s_A 205 RARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADG-T----P 279 (377)
T ss_dssp EEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHC-C----T
T ss_pred EEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhc-C----C
Confidence 57999888866544333 32221 11 22334444455544467888899999999999999 7666532 1 1
Q ss_pred CcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 77 QIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 77 ~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
.- +||++++ .++|+.|+.+.+.+...
T Consensus 280 ~g-~~~i~~~--~~~s~~e~~~~i~~~~g 305 (377)
T 2q1s_A 280 GG-VYNIASG--KETSIADLATKINEITG 305 (377)
T ss_dssp TE-EEECCCC--CCEEHHHHHHHHHHHHT
T ss_pred CC-eEEecCC--CceeHHHHHHHHHHHhC
Confidence 23 9999886 57999999999887653
No 13
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=95.74 E-value=0.021 Score=48.25 Aligned_cols=90 Identities=14% Similarity=0.074 Sum_probs=58.9
Q ss_pred ccccceEEcccCCCccce-eccCC--chhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCE
Q psy3448 4 SGLHILVVSTYREPVRGW-IDNVY--GPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPI 80 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGW-iDn~~--G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~V 80 (154)
.+||+.|.+.... || ..|.. ....++.....+. ..-.++.+...|+++||.++++++.++-... ...+
T Consensus 332 ilRp~~v~G~~~~---~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~-----~~~~ 402 (508)
T 4f6l_B 332 IVRVGNLTSPYNG---RWHMRNIKTNRFSMVMNDLLQLD-CIGVSMAEMPVDFSFVDTTARQIVALAQVNT-----PQII 402 (508)
T ss_dssp EEEECCEESCSSS---CCCCTTCTTCHHHHHHHHHTTCS-EEETTGGGSEEECEEHHHHHHHHHHHTTBCC-----SCSE
T ss_pred EEecceeccCCCC---CcccCCcchHHHHHHHHHHHHcC-CCCCCccCceEEEEcHHHHHHHHHHHHhCCC-----CCCE
Confidence 5899999886543 33 22221 1223333333322 1112345788999999999999998874221 3469
Q ss_pred EEeecCCCCcccHHHHHHHHHhcC
Q psy3448 81 YNYVSSVQKPVTWNEFLQHNIKHG 104 (154)
Q Consensus 81 Y~~~ss~~np~t~~~~~~~~~~~~ 104 (154)
||++++ ++++|.|+.+.+.+..
T Consensus 403 ~nl~~~--~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 403 YHVLSP--NKMPVKSLLECVKRKE 424 (508)
T ss_dssp EEESCS--CEEEHHHHHHHHHSSC
T ss_pred EEeCCC--CCCCHHHHHHHHHHcC
Confidence 999887 6899999999988654
No 14
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=95.59 E-value=0.029 Score=44.07 Aligned_cols=99 Identities=5% Similarity=-0.131 Sum_probs=64.3
Q ss_pred ccccceEEcccCCCccceeccCCc-hhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYG-PVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYN 82 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G-~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~ 82 (154)
.+||+.|.+..+++...+-.+..+ ...++.....|.--.++++.+...|+|.||=++++++.++-..... ..-.+||
T Consensus 172 ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~--~~g~~~~ 249 (345)
T 2bll_A 172 LFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNR--CDGEIIN 249 (345)
T ss_dssp EEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGT--TTTEEEE
T ss_pred EEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhcccc--CCCceEE
Confidence 578998887665543322211111 2234444445554456788888899999999999998877432210 1235999
Q ss_pred eecCCCCcccHHHHHHHHHhcCc
Q psy3448 83 YVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 83 ~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
++++. +++|+.|+.+.+.+...
T Consensus 250 i~~~~-~~~s~~e~~~~i~~~~g 271 (345)
T 2bll_A 250 IGNPE-NEASIEELGEMLLASFE 271 (345)
T ss_dssp ECCTT-SEEEHHHHHHHHHHHHH
T ss_pred eCCCC-CCCCHHHHHHHHHHHhC
Confidence 98762 37999999999887653
No 15
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=95.47 E-value=0.021 Score=46.95 Aligned_cols=90 Identities=13% Similarity=0.012 Sum_probs=57.8
Q ss_pred ccccceEEcccCCCccceeccCC--chhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVY--GPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIY 81 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~--G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY 81 (154)
.+||+.|.+....+. |.+|.. ....++.....+-. .-.++.+...++++||-++++++.++-... .-.+|
T Consensus 251 ivRpg~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~-----~g~~~ 322 (427)
T 4f6c_A 251 IVRVGNLTSPYNGRW--HMRNIKTNRFSMVMNDLLQLDC-IGVSMAEMPVDFSFVDTTARQIVALAQVNT-----PQIIY 322 (427)
T ss_dssp EEEECCEESCSSSCC--CCTTGGGCHHHHHHHHHHHSSE-EEHHHHTCEECCEEHHHHHHHHHHHTTSCC-----CCSEE
T ss_pred EEeCCeeecCCCCCc--cccCcchHHHHHHHHHHHhcCC-CCCccccceEEEeeHHHHHHHHHHHHcCCC-----CCCEE
Confidence 589999988664332 222211 12233333322221 112446888999999999999988873221 34699
Q ss_pred EeecCCCCcccHHHHHHHHHhc
Q psy3448 82 NYVSSVQKPVTWNEFLQHNIKH 103 (154)
Q Consensus 82 ~~~ss~~np~t~~~~~~~~~~~ 103 (154)
|++++ .+++|.|+.+.+.++
T Consensus 323 ~l~~~--~~~s~~el~~~i~~~ 342 (427)
T 4f6c_A 323 HVLSP--NKMPVKSLLECVKRK 342 (427)
T ss_dssp EESCS--CCEEHHHHHHHHHSS
T ss_pred EecCC--CCCcHHHHHHHHHHc
Confidence 99886 589999999998864
No 16
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=95.44 E-value=0.028 Score=44.76 Aligned_cols=95 Identities=6% Similarity=-0.092 Sum_probs=57.9
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+..+.+-.+ -...++-....|..-. ..+++...|+|.||=++++++.++-.........-.+||+
T Consensus 190 ~lrp~~v~G~~~~~~~~------~~~~~~~~~~~g~~~~-~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni 262 (357)
T 1rkx_A 190 TVRAGNVIGGGDWALDR------IVPDILRAFEQSQPVI-IRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNF 262 (357)
T ss_dssp EEECCCEECTTCCCSSC------HHHHHHHHHHTTCCEE-CSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEEC
T ss_pred EEeeceeeCCCCCcccc------HHHHHHHHHhcCCCEE-ECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEE
Confidence 57888887743221111 1122333333343322 3456778899999999999887764321110012369999
Q ss_pred ecCCCCcccHHHHHHHHHhcCc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+++...++|+.|+.+.+.+...
T Consensus 263 ~~~~~~~~s~~e~~~~i~~~~g 284 (357)
T 1rkx_A 263 GPNDADATPVKNIVEQMVKYWG 284 (357)
T ss_dssp CCCGGGCEEHHHHHHHHHHHHC
T ss_pred CCCCCCcccHHHHHHHHHHHhC
Confidence 8864568999999999887653
No 17
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=95.36 E-value=0.07 Score=41.32 Aligned_cols=86 Identities=14% Similarity=0.033 Sum_probs=60.7
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+..+.+ . .-...++-....|..-.++++.+...|+|.+|=++++++.++-.. ..- +||+
T Consensus 168 ilRp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~-----~~g-~~~i 234 (321)
T 3vps_A 168 IVRFFNVYGPGERP-D------ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRP-----LPS-VVNF 234 (321)
T ss_dssp EEEECEEECTTCCT-T------SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSC-----CCS-EEEE
T ss_pred EEEeccccCcCCCC-C------ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcC-----CCC-eEEe
Confidence 57898888755444 1 112334444445555567788999999999999999988876321 122 9999
Q ss_pred ecCCCCcccHHHHHHHHHhcCc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+++ .++|+.|+.+... ...
T Consensus 235 ~~~--~~~s~~e~~~~i~-~~g 253 (321)
T 3vps_A 235 GSG--QSLSVNDVIRILQ-ATS 253 (321)
T ss_dssp SCS--CCEEHHHHHHHHH-TTC
T ss_pred cCC--CcccHHHHHHHHH-HhC
Confidence 887 5799999999998 544
No 18
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=95.35 E-value=0.1 Score=40.80 Aligned_cols=98 Identities=9% Similarity=-0.017 Sum_probs=60.9
Q ss_pred ccccceEEcccCCCccceecc-CCchhhhhhhhcc--Cceeeeec------CCCCccccchHHHHHHHHHHHhhhhhhcc
Q psy3448 4 SGLHILVVSTYREPVRGWIDN-VYGPVGLMVGIGT--GVLHTYQY------DQDAVTEMVPVDMVVNSVIATAWYTAKSN 74 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn-~~G~~gl~~~~g~--G~lr~~~~------~~~~~~D~VPvD~vvn~li~aa~~~~~~~ 74 (154)
.+||+.|.+......-|.-+. .......+..... +-.-.+++ +.+...|+|.||=++++++.++-.....
T Consensus 166 ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~- 244 (330)
T 2c20_A 166 IFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNG- 244 (330)
T ss_dssp EEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTT-
T ss_pred EEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccC-
Confidence 579988887643333332221 1222333333222 22223444 5678889999999999988877433221
Q ss_pred CCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 75 QQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 75 ~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
..-.+||++++ .++|+.|+.+.+.+...
T Consensus 245 -~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 272 (330)
T 2c20_A 245 -GESDFYNLGNG--NGFSVKEIVDAVREVTN 272 (330)
T ss_dssp -CCCEEEECCCT--TCBCHHHHHHHHHHHTT
T ss_pred -CCCCeEEeCCC--CCccHHHHHHHHHHHhC
Confidence 12369999876 57999999999988654
No 19
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=95.29 E-value=0.04 Score=43.31 Aligned_cols=93 Identities=9% Similarity=0.021 Sum_probs=60.9
Q ss_pred ccccceEEcccCCCc--cceeccCCchhhhhhhhccCc-----eeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCC
Q psy3448 4 SGLHILVVSTYREPV--RGWIDNVYGPVGLMVGIGTGV-----LHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQ 76 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~--pGWiDn~~G~~gl~~~~g~G~-----lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~ 76 (154)
.+||+.|.+..+.+. .|++ ..++.....|. --..+++.+...|+|.+|=++++++.++-.....
T Consensus 189 ilrp~~v~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~--- 259 (347)
T 1orr_A 189 VFRHSSMYGGRQFATYDQGWV------GWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKI--- 259 (347)
T ss_dssp EEEECCEECTTCCCBTTBCHH------HHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHH---
T ss_pred EEccCceeCcCCCCCCcCcHH------HHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccC---
Confidence 478888887654432 1121 11222222332 2335688889999999999999988877431111
Q ss_pred CcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 77 QIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 77 ~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
.-.+||++++..+++|+.|+.+.+.+...
T Consensus 260 ~g~~~~v~~~~~~~~s~~e~~~~i~~~~g 288 (347)
T 1orr_A 260 RGNAFNIGGTIVNSLSLLELFKLLEDYCN 288 (347)
T ss_dssp TTCEEEESSCGGGEEEHHHHHHHHHHHHT
T ss_pred CCCEEEeCCCCCCCccHHHHHHHHHHHhC
Confidence 23599998876668999999999887654
No 20
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=94.97 E-value=0.079 Score=41.09 Aligned_cols=93 Identities=11% Similarity=-0.081 Sum_probs=58.1
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccC-ceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTG-VLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYN 82 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G-~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~ 82 (154)
.+||+.|.+..+.+ |+ ...++.....| ..-..+++.+...|+|.||=++++++.++-+.... ...-.+||
T Consensus 161 ~lrp~~v~g~~~~~--~~------~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~-~~~~~~~n 231 (312)
T 3ko8_A 161 AVRYANVVGPRLRH--GV------IYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEM-DAPFLALN 231 (312)
T ss_dssp EEEECEEECTTCCS--SH------HHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHS-CCSEEEEE
T ss_pred EEeeccccCcCCCC--Ch------HHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhcccc-CCCCcEEE
Confidence 57898887754332 11 12223333333 23346788889999999999999988887542111 12346999
Q ss_pred eecCCCCcccHHHHHHHHHhcCccC
Q psy3448 83 YVSSVQKPVTWNEFLQHNIKHGHHW 107 (154)
Q Consensus 83 ~~ss~~np~t~~~~~~~~~~~~~~~ 107 (154)
++++ .++++.|+.+.+.+...+.
T Consensus 232 i~~~--~~~s~~e~~~~i~~~~g~~ 254 (312)
T 3ko8_A 232 VGNV--DAVRVLDIAQIVAEVLGLR 254 (312)
T ss_dssp ESCS--SCEEHHHHHHHHHHHHTCC
T ss_pred EcCC--CceeHHHHHHHHHHHhCCC
Confidence 9887 5799999999998876443
No 21
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.94 E-value=0.1 Score=39.93 Aligned_cols=81 Identities=14% Similarity=0.110 Sum_probs=56.1
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+..+.++ . ....|....+..+ +...|.|.+|=++++++.++-+.. .-.+||+
T Consensus 148 ilRp~~v~G~~~~~~----~----------~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~-----~g~~~~i 207 (286)
T 3ius_A 148 VFRLAGIYGPGRGPF----S----------KLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD-----PGAVYNV 207 (286)
T ss_dssp EEEECEEEBTTBSSS----T----------TSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-----TTCEEEE
T ss_pred EEeccceECCCchHH----H----------HHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-----CCCEEEE
Confidence 579998888654442 1 1223443344444 577899999999999888763211 2359999
Q ss_pred ecCCCCcccHHHHHHHHHhcCcc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
+++ .++|+.|+.+...+...+
T Consensus 208 ~~~--~~~s~~e~~~~i~~~~g~ 228 (286)
T 3ius_A 208 CDD--EPVPPQDVIAYAAELQGL 228 (286)
T ss_dssp CCS--CCBCHHHHHHHHHHHHTC
T ss_pred eCC--CCccHHHHHHHHHHHcCC
Confidence 887 579999999999886543
No 22
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.89 E-value=0.072 Score=42.26 Aligned_cols=92 Identities=10% Similarity=-0.006 Sum_probs=61.0
Q ss_pred ccccceEEcccCCCccceeccCCch-hhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGP-VGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYN 82 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~-~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~ 82 (154)
.+||+.|.+....+-.. ..+. ..++.....|..-.++++.+...|+|.||=++++++.++..... ..-.+||
T Consensus 201 ilRp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~---~~~~~~n 273 (352)
T 1sb8_A 201 GLRYFNVFGRRQDPNGA----YAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD---ARNQVYN 273 (352)
T ss_dssp EEEECCEECTTCCCCST----TCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG---GCSEEEE
T ss_pred EEEECceeCcCCCCCcc----hhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc---CCCceEE
Confidence 57898888765443210 1111 12223334455445678888999999999999998877643111 1235999
Q ss_pred eecCCCCcccHHHHHHHHHhcC
Q psy3448 83 YVSSVQKPVTWNEFLQHNIKHG 104 (154)
Q Consensus 83 ~~ss~~np~t~~~~~~~~~~~~ 104 (154)
++++ .++|+.|+.+.+.+..
T Consensus 274 i~~~--~~~s~~e~~~~i~~~~ 293 (352)
T 1sb8_A 274 IAVG--GRTSLNQLFFALRDGL 293 (352)
T ss_dssp ESCS--CCEEHHHHHHHHHHHH
T ss_pred eCCC--CCccHHHHHHHHHHHH
Confidence 9877 5799999999988866
No 23
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=94.83 E-value=0.047 Score=43.61 Aligned_cols=91 Identities=12% Similarity=-0.036 Sum_probs=63.0
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+..+.+...|. .-...++.....|..-.++++.+...|+|.||=|+++++.++-. . ..- +||+
T Consensus 183 ~lR~~~v~Gp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~----~-~~g-~~~i 253 (362)
T 3sxp_A 183 GLRYFNVYGPREFYKEKTA---SMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKA----Q-KSG-VYNV 253 (362)
T ss_dssp EEEECSEESTTCGGGGGGS---CHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTC----S-SCE-EEEE
T ss_pred EEEeCceeCcCCCCCCcch---hHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhc----C-CCC-EEEe
Confidence 5799888775444322110 11233444555566666678888999999999999999887632 1 122 9999
Q ss_pred ecCCCCcccHHHHHHHHHhcCc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+++ .++|+.|+.+.+.+.+.
T Consensus 254 ~~~--~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 254 GYS--QARSYNEIVSILKEHLG 273 (362)
T ss_dssp SCS--CEEEHHHHHHHHHHHHC
T ss_pred CCC--CCccHHHHHHHHHHHcC
Confidence 887 57999999999988765
No 24
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=94.71 E-value=0.054 Score=42.23 Aligned_cols=96 Identities=13% Similarity=-0.059 Sum_probs=59.7
Q ss_pred ccccceEEcccCCCccceeccCCch-hhhhhhhc----cC-ceeeeecCCCCccccchHHHHHHHHHHHhhhhhhc----
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGP-VGLMVGIG----TG-VLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKS---- 73 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~-~gl~~~~g----~G-~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~---- 73 (154)
.+||+.|.+..+.+... ..+. ..++-.+- .| .--.++++.+...|+|.||=++++++.++-.....
T Consensus 160 ilrp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~ 235 (321)
T 1e6u_A 160 SVMPTNLYGPHDNFHPS----NSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLEN 235 (321)
T ss_dssp EEEECEEESTTCCCCTT----CSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHT
T ss_pred EEEeCCcCCcCCCCCCC----CCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccc
Confidence 57898888765443221 1111 12222221 23 22235688889999999999999998877432210
Q ss_pred cCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 74 NQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 74 ~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
....-.+||++++ .++|+.|+.+.+.+...
T Consensus 236 ~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 265 (321)
T 1e6u_A 236 TQPMLSHINVGTG--VDCTIRELAQTIAKVVG 265 (321)
T ss_dssp SBTTBCCEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred cccCCceEEeCCC--CCccHHHHHHHHHHHhC
Confidence 0001369999876 57999999999887654
No 25
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.31 E-value=0.15 Score=39.09 Aligned_cols=83 Identities=10% Similarity=-0.047 Sum_probs=56.6
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+..+. .+++.+.. +...++++...|+|.+|=++++++.++-..... ..-.+||+
T Consensus 151 ilR~~~v~G~~~~---~~~~~~~~-------------~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~--~~~~~~~~ 212 (286)
T 3gpi_A 151 ILRFSGIYGPGRL---RMIRQAQT-------------PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHA--VPERLYIV 212 (286)
T ss_dssp EEEECEEEBTTBC---HHHHHTTC-------------GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTS--CCCSEEEE
T ss_pred EEecccccCCCch---hHHHHHHh-------------cccCCCcCceeEEEEHHHHHHHHHHHHhhhccC--CCCceEEE
Confidence 5788888875433 12222211 122367788889999999999988877543211 23469999
Q ss_pred ecCCCCcccHHHHHHHHHhcCcc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
+++ .++|+.|+.+...+...+
T Consensus 213 ~~~--~~~s~~e~~~~i~~~~g~ 233 (286)
T 3gpi_A 213 TDN--QPLPVHDLLRWLADRQGI 233 (286)
T ss_dssp CCS--CCEEHHHHHHHHHHHTTC
T ss_pred eCC--CCCCHHHHHHHHHHHcCC
Confidence 876 579999999999887654
No 26
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.16 E-value=0.16 Score=40.99 Aligned_cols=91 Identities=14% Similarity=0.029 Sum_probs=60.6
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCce-eeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVL-HTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYN 82 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~l-r~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~ 82 (154)
.+||+.|.+..+.+..++.. -...++.....|.- -.++++.+...++|.||=++++++.++-.. .-.+||
T Consensus 200 ilrp~~v~G~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~------~~~~~n 270 (379)
T 2c5a_A 200 IGRFHNIYGPFGTWKGGREK---APAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD------FREPVN 270 (379)
T ss_dssp EEEECCEECTTSCCSSSCCC---HHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS------CCSCEE
T ss_pred EEEeCceeCcCCCccccccc---HHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc------CCCeEE
Confidence 47888887765544333211 12223333333431 245688888899999999999988876321 235899
Q ss_pred eecCCCCcccHHHHHHHHHhcCc
Q psy3448 83 YVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 83 ~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
++++ .++|+.|+.+.+.+...
T Consensus 271 i~~~--~~~s~~e~~~~i~~~~g 291 (379)
T 2c5a_A 271 IGSD--EMVSMNEMAEMVLSFEE 291 (379)
T ss_dssp ECCC--CCEEHHHHHHHHHHTTT
T ss_pred eCCC--CccCHHHHHHHHHHHhC
Confidence 9887 57999999999988654
No 27
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=94.09 E-value=0.22 Score=39.07 Aligned_cols=98 Identities=11% Similarity=-0.062 Sum_probs=58.8
Q ss_pred ccccceEEcccCCCccceecc--CCchhhhhhhhc--cCceeeeec------CCCCccccchHHHHHHHHHHHhhhhhhc
Q psy3448 4 SGLHILVVSTYREPVRGWIDN--VYGPVGLMVGIG--TGVLHTYQY------DQDAVTEMVPVDMVVNSVIATAWYTAKS 73 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn--~~G~~gl~~~~g--~G~lr~~~~------~~~~~~D~VPvD~vvn~li~aa~~~~~~ 73 (154)
.+||+.|.+.....+.|.-+. .......+.... .|-.-.+++ +.+...|+|.||=++++++.++-.....
T Consensus 182 ~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~ 261 (348)
T 1ek6_A 182 LLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQ 261 (348)
T ss_dssp EEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTT
T ss_pred EEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhccccc
Confidence 478888876532222222111 122223333332 333223444 5677889999999999988876432111
Q ss_pred cCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 74 NQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 74 ~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
..-.+||++++ .++|+.|+.+.+.+...
T Consensus 262 --~g~~~~ni~~~--~~~s~~e~~~~i~~~~g 289 (348)
T 1ek6_A 262 --CGCRIYNLGTG--TGYSVLQMVQAMEKASG 289 (348)
T ss_dssp --CCEEEEEECCS--CCEEHHHHHHHHHHHHC
T ss_pred --CCceEEEeCCC--CCccHHHHHHHHHHHhC
Confidence 11259999876 57999999999987654
No 28
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=94.04 E-value=0.15 Score=40.24 Aligned_cols=89 Identities=15% Similarity=-0.062 Sum_probs=58.5
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+....+-.+ .-...++.....|-.-.++++.+...|+|.||=++++++.++-. . ...+||+
T Consensus 194 ilrp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~----~--~~~~~~i 262 (343)
T 2b69_A 194 VARIFNTFGPRMHMNDG-----RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS----N--VSSPVNL 262 (343)
T ss_dssp EEEECCEECTTCCTTCC-----CHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS----S--CCSCEEE
T ss_pred EEEEcceeCcCCCCCcc-----cHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhc----C--CCCeEEe
Confidence 46888777654433211 01122333333444345678888899999999999998876521 1 2358999
Q ss_pred ecCCCCcccHHHHHHHHHhcCc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+++ .++|+.|+.+.+.+...
T Consensus 263 ~~~--~~~s~~e~~~~i~~~~g 282 (343)
T 2b69_A 263 GNP--EEHTILEFAQLIKNLVG 282 (343)
T ss_dssp SCC--CEEEHHHHHHHHHHHHT
T ss_pred cCC--CCCcHHHHHHHHHHHhC
Confidence 887 48999999999887654
No 29
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=93.98 E-value=0.078 Score=41.97 Aligned_cols=92 Identities=11% Similarity=0.102 Sum_probs=57.6
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhh--ccCceeeeecCC---CCccccchHHHHHHHHHHHhhhhhhccCCCc
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGI--GTGVLHTYQYDQ---DAVTEMVPVDMVVNSVIATAWYTAKSNQQQI 78 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~--g~G~lr~~~~~~---~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~ 78 (154)
.+||+.|.+..+.+... ...+..++... ..|..-.+++++ ....+++.||-++++++.++-+... .-
T Consensus 175 ilRp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~----~g 246 (364)
T 2v6g_A 175 VHRPGNIFGFSPYSMMN----LVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYA----KN 246 (364)
T ss_dssp EEEESSEECCCTTCSSC----HHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGG----TT
T ss_pred EECCCceeCCCCCcccc----hHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCCC----CC
Confidence 47888888755432211 00111122222 245443456666 4568999999999998887743211 22
Q ss_pred CEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 79 PIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 79 ~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
.+||++++ .++|+.|+.+.+.+...
T Consensus 247 ~~~ni~~~--~~~s~~e~~~~i~~~~g 271 (364)
T 2v6g_A 247 EAFNVSNG--DVFKWKHFWKVLAEQFG 271 (364)
T ss_dssp EEEEECCS--CCBCHHHHHHHHHHHHT
T ss_pred ceEEecCC--CcCCHHHHHHHHHHHhC
Confidence 59999876 47999999999887654
No 30
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=93.91 E-value=0.17 Score=39.60 Aligned_cols=88 Identities=14% Similarity=-0.016 Sum_probs=58.3
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+..+.+ .+. ...++.....|..-.++++.+...+++.+|=++++++.++-+ . ..-.+||+
T Consensus 175 ilrp~~v~G~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~----~~g~~~~v 242 (337)
T 1r6d_A 175 ITRCCNNYGPYQHP-EKL------IPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG-G----RAGEIYHI 242 (337)
T ss_dssp EEEECEEECTTCCT-TSH------HHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH-C----CTTCEEEE
T ss_pred EEEeeeeECCCCCC-CCh------HHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhC-C----CCCCEEEe
Confidence 47888877655432 111 112233333444334568888889999999999998877632 1 12359999
Q ss_pred ecCCCCcccHHHHHHHHHhcCc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+++ .++|+.|+.+.+.+...
T Consensus 243 ~~~--~~~s~~e~~~~i~~~~g 262 (337)
T 1r6d_A 243 GGG--LELTNRELTGILLDSLG 262 (337)
T ss_dssp CCC--CEEEHHHHHHHHHHHHT
T ss_pred CCC--CCccHHHHHHHHHHHhC
Confidence 876 57999999998887654
No 31
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=93.68 E-value=0.22 Score=38.89 Aligned_cols=89 Identities=12% Similarity=0.023 Sum_probs=56.5
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+..+.|- +. ...++...-.|..-.++++.+...+++.+|=++++++.++-. . ..-.+||+
T Consensus 175 ilrp~~v~g~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~-~----~~g~~~~v 242 (336)
T 2hun_A 175 ITRCTNNYGPYQFPE-KL------IPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLK-G----ESREIYNI 242 (336)
T ss_dssp EEEECEEESTTCCTT-SH------HHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHH-C----CTTCEEEE
T ss_pred EEeeeeeeCcCCCcC-ch------HHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhC-C----CCCCEEEe
Confidence 478888877554320 10 112222333444334567888888999999999998877632 1 13369999
Q ss_pred ecCCCCcccHHHHHHHHHhcCcc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
+++ .++|+.|+.+.+.+...+
T Consensus 243 ~~~--~~~s~~e~~~~i~~~~g~ 263 (336)
T 2hun_A 243 SAG--EEKTNLEVVKIILRLMGK 263 (336)
T ss_dssp CCS--CEECHHHHHHHHHHHTTC
T ss_pred CCC--CcccHHHHHHHHHHHhCC
Confidence 876 579999999998876543
No 32
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=93.67 E-value=0.2 Score=39.33 Aligned_cols=88 Identities=10% Similarity=-0.033 Sum_probs=58.7
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+....+- ++ ...++.....|..-.++++.+...+++.+|=|+++++.++-. . ..-.+||+
T Consensus 185 ilrp~~v~G~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~-~----~~g~~~~i 252 (348)
T 1oc2_A 185 ISNCSNNYGPYQHIE-KF------IPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK-G----RMGETYLI 252 (348)
T ss_dssp EEEECCEESTTCCTT-SH------HHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHH-C----CTTCEEEE
T ss_pred EEeeceeeCCCCCcc-ch------HHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhC-C----CCCCeEEe
Confidence 478888776554321 11 112233333444345668888889999999999998877632 1 12359999
Q ss_pred ecCCCCcccHHHHHHHHHhcCc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+++ .++++.|+.+.+.+...
T Consensus 253 ~~~--~~~s~~e~~~~i~~~~g 272 (348)
T 1oc2_A 253 GAD--GEKNNKEVLELILEKMG 272 (348)
T ss_dssp CCS--CEEEHHHHHHHHHHHTT
T ss_pred CCC--CCCCHHHHHHHHHHHhC
Confidence 876 57999999999887654
No 33
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=93.64 E-value=0.15 Score=39.93 Aligned_cols=65 Identities=14% Similarity=-0.007 Sum_probs=48.7
Q ss_pred hhccCc-eeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCcc
Q psy3448 34 GIGTGV-LHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 34 ~~g~G~-lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
....|. ....+++.+...|+|.||=++++++.++-. . ...+||++++ .++|+.|+.+.+.+...+
T Consensus 212 ~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~----~--~~~~~ni~~~--~~~s~~e~~~~i~~~~g~ 277 (335)
T 1rpn_A 212 RIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQ----D--KADDYVVATG--VTTTVRDMCQIAFEHVGL 277 (335)
T ss_dssp HHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHS----S--SCCCEEECCS--CEEEHHHHHHHHHHTTTC
T ss_pred HHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhc----C--CCCEEEEeCC--CCccHHHHHHHHHHHhCC
Confidence 334454 234568889999999999999998887632 1 1269999876 579999999999886543
No 34
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=93.62 E-value=0.2 Score=38.75 Aligned_cols=57 Identities=11% Similarity=-0.089 Sum_probs=45.1
Q ss_pred eecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCcc
Q psy3448 43 YQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 43 ~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
..++++...+.|=||=++++++.+.-+. +...+||+++. +|+|+.|+.+...+...+
T Consensus 182 ~~g~g~~~~~~ihv~Dva~a~~~~~~~~-----~~~g~yn~~~~--~~~t~~e~~~~ia~~lgr 238 (298)
T 4b4o_A 182 PIGSGHQFFPWIHIGDLAGILTHALEAN-----HVHGVLNGVAP--SSATNAEFAQTFGAALGR 238 (298)
T ss_dssp CBTTSCSBCCEEEHHHHHHHHHHHHHCT-----TCCEEEEESCS--CCCBHHHHHHHHHHHHTC
T ss_pred eecccCceeecCcHHHHHHHHHHHHhCC-----CCCCeEEEECC--CccCHHHHHHHHHHHhCc
Confidence 4588999999999999999888776321 12349999887 799999999998887654
No 35
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=93.48 E-value=0.098 Score=41.24 Aligned_cols=67 Identities=7% Similarity=0.012 Sum_probs=50.9
Q ss_pred hhhccCceeeeecCCCCcccc----chHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 33 VGIGTGVLHTYQYDQDAVTEM----VPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 33 ~~~g~G~lr~~~~~~~~~~D~----VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
-....|.--.++++.+...|+ |.||=++++++.++-.... .-.+||++++ .++|+.|+.+.+.+...
T Consensus 222 ~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~----~~~~~ni~~~--~~~s~~e~~~~i~~~~g 292 (347)
T 4id9_A 222 QSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEA----AGGTFNLGAD--EPADFAALLPKIAALTG 292 (347)
T ss_dssp HHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGG----TTEEEEESCS--SCEEHHHHHHHHHHHHC
T ss_pred HHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCccc----CCCeEEECCC--CcccHHHHHHHHHHHhC
Confidence 344455555677888888899 9999999999888743321 2359999887 57999999999988654
No 36
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=93.22 E-value=0.12 Score=39.75 Aligned_cols=90 Identities=9% Similarity=-0.020 Sum_probs=47.8
Q ss_pred ccccceEEcccCCCccceeccCCchh-hhhhhhccCceeeeecCCCC-ccccchHHHHHHHHHHHhhhhhhccCCCcCEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPV-GLMVGIGTGVLHTYQYDQDA-VTEMVPVDMVVNSVIATAWYTAKSNQQQIPIY 81 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~-gl~~~~g~G~lr~~~~~~~~-~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY 81 (154)
.+||+.|.+..+.+.. +..+.. .++-....|..-.++++.+. ..|+|.||=++++++.++-.. . -.+|
T Consensus 164 ~lrp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~-----~-~~~~ 233 (310)
T 1eq2_A 164 GFRYFNVYGPREGHKG----SMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG-----V-SGIF 233 (310)
T ss_dssp EEEECEEESSSCGGGG----GGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC-----C-CEEE
T ss_pred EEeCCcEECcCCCCCC----ccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcC-----C-CCeE
Confidence 4788888765433211 111221 22222334443345677778 889999999999988876321 1 3599
Q ss_pred EeecCCCCcccHHHHHHHHHhcCc
Q psy3448 82 NYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 82 ~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
|++++ .++|+.|+.+...+...
T Consensus 234 ~i~~~--~~~s~~e~~~~i~~~~g 255 (310)
T 1eq2_A 234 NLGTG--RAESFQAVADATLAYHK 255 (310)
T ss_dssp EESCS--CCBCHHHHHHHC-----
T ss_pred EEeCC--CccCHHHHHHHHHHHcC
Confidence 99876 57999999998876543
No 37
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=92.87 E-value=0.25 Score=39.19 Aligned_cols=90 Identities=10% Similarity=0.014 Sum_probs=58.6
Q ss_pred ccccceEEcccCCCccceeccCCch-hhhhhhhccCceeeeecCCCC-ccccchHHHHHHHHHHHhhhhhhccCCCcCEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGP-VGLMVGIGTGVLHTYQYDQDA-VTEMVPVDMVVNSVIATAWYTAKSNQQQIPIY 81 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~-~gl~~~~g~G~lr~~~~~~~~-~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY 81 (154)
.+||+.|.+..+.+- + +..+. ..++-....|..-.++++.+. ..|+|.||=++++++.++-... -.+|
T Consensus 211 ilRp~~v~Gp~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~------~~~~ 280 (357)
T 2x6t_A 211 GFRYFNVYGPREGHK-G---SMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV------SGIF 280 (357)
T ss_dssp EEEECEEESSSCTTC-G---GGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC------CEEE
T ss_pred EEecCeEECCCCCCC-c---ccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC------CCeE
Confidence 478888876544331 1 11111 122223334443345677777 8899999999999888763211 3599
Q ss_pred EeecCCCCcccHHHHHHHHHhcCc
Q psy3448 82 NYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 82 ~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
|++++ .++|+.|+.+.+.+...
T Consensus 281 ~i~~~--~~~s~~e~~~~i~~~~g 302 (357)
T 2x6t_A 281 NLGTG--RAESFQAVADATLAYHK 302 (357)
T ss_dssp EESCS--CCEEHHHHHHHHHHHHT
T ss_pred EecCC--CcccHHHHHHHHHHHcC
Confidence 99876 57999999999887654
No 38
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=92.79 E-value=0.17 Score=42.92 Aligned_cols=56 Identities=13% Similarity=0.011 Sum_probs=43.1
Q ss_pred eecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 43 YQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 43 ~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
..++.+...+.|.+|=++++++.++-+.. ...+||++++ +++|+.|+.+.+.+...
T Consensus 329 ~~g~g~~~~~~i~v~Dva~ai~~~l~~~~-----~~g~~ni~~~--~~~s~~el~~~i~~~~g 384 (516)
T 3oh8_A 329 KFGDGTSWFSWIAIDDLTDIYYRAIVDAQ-----ISGPINAVAP--NPVSNADMTKILATSMH 384 (516)
T ss_dssp CCTTSCCEECEEEHHHHHHHHHHHHHCTT-----CCEEEEESCS--CCEEHHHHHHHTTC---
T ss_pred ccCCCCceEceEeHHHHHHHHHHHHhCcc-----cCCcEEEECC--CCCCHHHHHHHHHHHhC
Confidence 56888899999999999999888774221 2348999887 68999999999877544
No 39
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=92.76 E-value=0.31 Score=37.53 Aligned_cols=94 Identities=16% Similarity=0.027 Sum_probs=58.8
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhh-hccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVG-IGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYN 82 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~-~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~ 82 (154)
.+||+.|.+..+.|-.+.. +.....+.. ...|- ...+++.+...|+|.||=++++++.++-...... ..-.+||
T Consensus 167 ~lrp~~v~g~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~-~~~~~~n 241 (312)
T 2yy7_A 167 SIRYPGLISWSTPPGGGTT---DYAVDIFYKAIADKK-YECFLSSETKMPMMYMDDAIDATINIMKAPVEKI-KIHSSYN 241 (312)
T ss_dssp CEEECEEECSSSCCCSCTT---THHHHHHHHHHHTSE-EEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGC-CCSSCEE
T ss_pred EEeCCeEecCCCCCCCchh---hhHHHHHHHHHcCCC-eEEecCCCceeeeeeHHHHHHHHHHHHhCccccc-ccCceEE
Confidence 5788888775544432211 112223322 22343 3356778888999999999999888774322110 0126999
Q ss_pred eecCCCCcccHHHHHHHHHhcCc
Q psy3448 83 YVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 83 ~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+++ .++|+.|+.+.+.+...
T Consensus 242 i~~---~~~s~~e~~~~i~~~~~ 261 (312)
T 2yy7_A 242 LAA---MSFTPTEIANEIKKHIP 261 (312)
T ss_dssp CCS---EEECHHHHHHHHHTTCT
T ss_pred eCC---CccCHHHHHHHHHHHCC
Confidence 974 47999999999987654
No 40
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=92.65 E-value=0.36 Score=38.10 Aligned_cols=88 Identities=8% Similarity=-0.102 Sum_probs=58.2
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+....|- ++ ...++.....|..-.++++.+...+++.+|=++++++.++-. . ..-.+||+
T Consensus 191 ~vrp~~v~G~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~----~~g~~~~v 258 (361)
T 1kew_A 191 VTNCSNNYGPYHFPE-KL------IPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTE-G----KAGETYNI 258 (361)
T ss_dssp EEEECEEESTTCCTT-SH------HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH-C----CTTCEEEE
T ss_pred EEeeceeECCCCCcc-cH------HHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhC-C----CCCCEEEe
Confidence 478888877554331 11 122333333444334567888888999999999998887632 1 12359999
Q ss_pred ecCCCCcccHHHHHHHHHhcCc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+++ .++++.|+.+.+.+...
T Consensus 259 ~~~--~~~s~~e~~~~i~~~~g 278 (361)
T 1kew_A 259 GGH--NEKKNLDVVFTICDLLD 278 (361)
T ss_dssp CCC--CEEEHHHHHHHHHHHHH
T ss_pred cCC--CeeeHHHHHHHHHHHhC
Confidence 876 57999999988876543
No 41
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=92.54 E-value=0.4 Score=37.52 Aligned_cols=56 Identities=14% Similarity=0.086 Sum_probs=40.9
Q ss_pred CCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 46 DQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 46 ~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+.+...|+|-||=++++++.++-..... ....+||++++ .++|+.|+.+.+.+...
T Consensus 226 ~g~~~~~~i~v~Dva~a~~~~l~~~~~~--~~~~~yni~~~--~~~s~~e~~~~i~~~~g 281 (338)
T 1udb_A 226 DGTGVRDYIHVMDLADGHVVAMEKLANK--PGVHIYNLGAG--VGNSVLDVVNAFSKACG 281 (338)
T ss_dssp SSSCEECEEEHHHHHHHHHHHHHHHTTC--CEEEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred CCceeeeeEEHHHHHHHHHHHHhhhhcc--CCCcEEEecCC--CceeHHHHHHHHHHHhC
Confidence 4566779999999999988876432111 11259999876 57999999999887543
No 42
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=92.14 E-value=0.23 Score=43.27 Aligned_cols=99 Identities=5% Similarity=-0.131 Sum_probs=62.7
Q ss_pred ccccceEEcccCCCccceeccCCc-hhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYG-PVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYN 82 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G-~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~ 82 (154)
.+||+.|.+..+.+..++.-+..+ ...++.....|.--.++++.+...+++.||-++++++.++-..... ..-.+||
T Consensus 487 ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~--~~g~~~n 564 (660)
T 1z7e_A 487 LFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNR--CDGEIIN 564 (660)
T ss_dssp EEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGT--TTTEEEE
T ss_pred EECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCcccc--CCCeEEE
Confidence 578998887665543221111111 1233334445554456778888999999999999988877432211 1235999
Q ss_pred eecCCCCcccHHHHHHHHHhcCc
Q psy3448 83 YVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 83 ~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
++++. +++|+.|+.+.+.+...
T Consensus 565 i~~~~-~~~s~~el~~~i~~~~g 586 (660)
T 1z7e_A 565 IGNPE-NEASIEELGEMLLASFE 586 (660)
T ss_dssp ECCGG-GEEEHHHHHHHHHHHHH
T ss_pred ECCCC-CCcCHHHHHHHHHHHhc
Confidence 97652 47999999998876543
No 43
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=91.38 E-value=0.83 Score=35.28 Aligned_cols=58 Identities=16% Similarity=0.137 Sum_probs=45.2
Q ss_pred eeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCcc
Q psy3448 42 TYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 42 ~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
..+++.+...+++.+|=++++++.++-.. ..-.+||++++ .++++.|+.+.+.+...+
T Consensus 212 ~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-----~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~ 269 (321)
T 2pk3_A 212 IKVGNLEAVRDFTDVRDIVQAYWLLSQYG-----KTGDVYNVCSG--IGTRIQDVLDLLLAMANV 269 (321)
T ss_dssp EEESCSSCEEEEEEHHHHHHHHHHHHHHC-----CTTCEEEESCS--CEEEHHHHHHHHHHHSSS
T ss_pred EEeCCCCcEEeeEEHHHHHHHHHHHHhCC-----CCCCeEEeCCC--CCeeHHHHHHHHHHHhCC
Confidence 45677788889999999999988876432 12369999876 579999999999886543
No 44
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=91.33 E-value=0.52 Score=36.42 Aligned_cols=94 Identities=13% Similarity=-0.010 Sum_probs=57.7
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhh-hccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVG-IGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYN 82 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~-~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~ 82 (154)
.+||+.|.+....|-.+..+. ....+.. ...|.. ..+++++...|+|.||=++++++.++-...... ..-.+||
T Consensus 161 ~lR~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~-~~g~~~~ 235 (317)
T 3ajr_A 161 SLRYPGIISYKAEPTAGTTDY---AVEIFYYAVKREKY-KCYLAPNRALPMMYMPDALKALVDLYEADRDKL-VLRNGYN 235 (317)
T ss_dssp EEEECEEECSSSCCCSCSSTH---HHHHHHHHHTTCCE-EECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGC-SSCSCEE
T ss_pred EEecCcEeccCCCCCCcchhH---HHHHHHHHHhCCCc-eeecCccceeeeeEHHHHHHHHHHHHhCCcccc-ccCceEe
Confidence 468777777655554332211 1222222 223332 345677888999999999999887764322110 0126999
Q ss_pred eecCCCCcccHHHHHHHHHhcCc
Q psy3448 83 YVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 83 ~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+++ .++|+.|+.+.+.+...
T Consensus 236 i~~---~~~s~~e~~~~i~~~~~ 255 (317)
T 3ajr_A 236 VTA---YTFTPSELYSKIKERIP 255 (317)
T ss_dssp CCS---EEECHHHHHHHHHTTCC
T ss_pred cCC---ccccHHHHHHHHHHHCC
Confidence 974 36999999999887654
No 45
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=91.33 E-value=0.63 Score=35.45 Aligned_cols=84 Identities=8% Similarity=-0.007 Sum_probs=55.0
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+..+.. + ...++-....|..-.+.++ ...+.|.+|=++++++.++-.. ...+||+
T Consensus 150 ilR~~~v~G~~~~~---~------~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~------~~~~~~i 212 (287)
T 3sc6_A 150 IVRTSWLYGKYGNN---F------VKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTS------LYGTYHV 212 (287)
T ss_dssp EEEECSEECSSSCC---H------HHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSC------CCEEEEC
T ss_pred EEeeeeecCCCCCc---H------HHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCC------CCCeEEE
Confidence 57888887743221 1 1222222333443344454 6779999999999988776321 1359999
Q ss_pred ecCCCCcccHHHHHHHHHhcCcc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
+++ .++|+.|+.+...+...+
T Consensus 213 ~~~--~~~s~~e~~~~i~~~~g~ 233 (287)
T 3sc6_A 213 SNT--GSCSWFEFAKKIFSYANM 233 (287)
T ss_dssp CCB--SCEEHHHHHHHHHHHHTC
T ss_pred cCC--CcccHHHHHHHHHHHcCC
Confidence 887 479999999999886543
No 46
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=90.97 E-value=0.62 Score=40.72 Aligned_cols=58 Identities=21% Similarity=0.125 Sum_probs=43.0
Q ss_pred CCCCccccchHHHHHHHHHHHhhhhhhc--cCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 46 DQDAVTEMVPVDMVVNSVIATAWYTAKS--NQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 46 ~~~~~~D~VPvD~vvn~li~aa~~~~~~--~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+.+...|+|.||=|+++++.++...... ......+||++++ .++|+.|+.+.+.+...
T Consensus 241 ~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~--~~~s~~el~~~i~~~~g 300 (699)
T 1z45_A 241 DGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSG--KGSTVFEVYHAFCKASG 300 (699)
T ss_dssp CSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred CCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCC--CCCcHHHHHHHHHHHhC
Confidence 5678889999999999998887543211 0112359999887 47999999999887654
No 47
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=90.89 E-value=0.56 Score=37.08 Aligned_cols=62 Identities=10% Similarity=0.021 Sum_probs=47.0
Q ss_pred ccCce-eeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 36 GTGVL-HTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 36 g~G~l-r~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
..|.. ....++.+...|+|.||=++++++.++-. + ...+||++++ .++|+.|+.+...+...
T Consensus 208 ~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~-----~-~~~~~ni~~~--~~~s~~e~~~~i~~~~g 270 (372)
T 1db3_A 208 AQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ-----E-QPEDFVIATG--VQYSVRQFVEMAAAQLG 270 (372)
T ss_dssp HTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSS-----S-SCCCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred HcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhc-----C-CCceEEEcCC--CceeHHHHHHHHHHHhC
Confidence 34542 33568888999999999999999887621 1 1268999876 57999999999988654
No 48
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=90.78 E-value=1.2 Score=34.33 Aligned_cols=92 Identities=5% Similarity=-0.135 Sum_probs=56.5
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhc-cCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEE
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIG-TGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYN 82 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g-~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~ 82 (154)
.+||+.|.+..+.+-.+++.. ++-... .|....+. .+...+.+.+|=++++++.++-+..... ..-.+||
T Consensus 153 ~lR~~~v~G~~~~~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~-~~~~~~~ 223 (315)
T 2ydy_A 153 VLRIPILYGEVEKLEESAVTV------MFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDP-SIKGTFH 223 (315)
T ss_dssp EEEECSEECSCSSGGGSTTGG------GHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCT-TCCEEEE
T ss_pred EEeeeeeeCCCCcccccHHHH------HHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhcccc-CCCCeEE
Confidence 478988886554432222221 222222 33322222 3567799999999999887764431110 1336999
Q ss_pred eecCCCCcccHHHHHHHHHhcCcc
Q psy3448 83 YVSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 83 ~~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
++++ .++++.|+.+...+...+
T Consensus 224 i~~~--~~~s~~e~~~~i~~~~g~ 245 (315)
T 2ydy_A 224 WSGN--EQMTKYEMACAIADAFNL 245 (315)
T ss_dssp CCCS--CCBCHHHHHHHHHHHTTC
T ss_pred EcCC--CcccHHHHHHHHHHHhCC
Confidence 9886 579999999999876543
No 49
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=90.48 E-value=0.72 Score=35.27 Aligned_cols=88 Identities=7% Similarity=0.069 Sum_probs=54.2
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+..++ +++ ..++-....|..-...++ ...+.+.+|=++++++.++-+.... ...-.+||+
T Consensus 148 ilRp~~v~G~~~~---~~~------~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~~~-~~~~~~~~i 215 (299)
T 1n2s_A 148 IFRTSWVYAGKGN---NFA------KTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRVALNK-PEVAGLYHL 215 (299)
T ss_dssp EEEECSEECSSSC---CHH------HHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHHHHHC-GGGCEEEEC
T ss_pred EEeeeeecCCCcC---cHH------HHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHHhccc-cccCceEEE
Confidence 4788887764322 111 122222233432234443 6789999999999988877543211 001359999
Q ss_pred ecCCCCcccHHHHHHHHHhcCc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+++ .++|+.|+.+...+...
T Consensus 216 ~~~--~~~s~~e~~~~i~~~~g 235 (299)
T 1n2s_A 216 VAG--GTTTWHDYAALVFDEAR 235 (299)
T ss_dssp CCB--SCEEHHHHHHHHHHHHH
T ss_pred eCC--CCCCHHHHHHHHHHHhC
Confidence 886 47999999998877543
No 50
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=88.46 E-value=0.87 Score=36.21 Aligned_cols=56 Identities=11% Similarity=0.005 Sum_probs=44.5
Q ss_pred eeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 42 TYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 42 ~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
...++.+...|+|.||-++++++.++-+ . ...+||++++ .++|+.|+.+.+.+...
T Consensus 239 ~~~g~~~~~~~~i~v~Dva~a~~~~~~~----~--~~~~~ni~~~--~~~s~~e~~~~i~~~~g 294 (375)
T 1t2a_A 239 FSLGNLDAKRDWGHAKDYVEAMWLMLQN----D--EPEDFVIATG--EVHSVREFVEKSFLHIG 294 (375)
T ss_dssp EEESCTTCEECCEEHHHHHHHHHHHHHS----S--SCCCEEECCS--CCEEHHHHHHHHHHHTT
T ss_pred eEeCCCCceeeeEEHHHHHHHHHHHHhc----C--CCceEEEeCC--CcccHHHHHHHHHHHhC
Confidence 4568888999999999999999877621 1 1268999876 57999999999987654
No 51
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=88.36 E-value=0.72 Score=36.18 Aligned_cols=54 Identities=13% Similarity=0.087 Sum_probs=41.4
Q ss_pred eecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 43 YQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 43 ~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+++ .+...+++.+|=++++++.++-.. . -.+||++++ .++|+.|+.+.+.+...
T Consensus 212 ~~~-~~~~~~~i~v~Dva~ai~~~~~~~-----~-g~~~~v~~~--~~~s~~e~~~~i~~~~g 265 (333)
T 2q1w_A 212 CFV-TKARRDFVFVKDLARATVRAVDGV-----G-HGAYHFSSG--TDVAIKELYDAVVEAMA 265 (333)
T ss_dssp CEE-EECEECEEEHHHHHHHHHHHHTTC-----C-CEEEECSCS--CCEEHHHHHHHHHHHTT
T ss_pred eeC-CCceEeeEEHHHHHHHHHHHHhcC-----C-CCEEEeCCC--CCccHHHHHHHHHHHhC
Confidence 444 566789999999999988776321 1 359999876 57999999999987654
No 52
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=87.27 E-value=1.1 Score=34.87 Aligned_cols=82 Identities=10% Similarity=0.112 Sum_probs=53.9
Q ss_pred ccccceEEcccC-CCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEE
Q psy3448 4 SGLHILVVSTYR-EPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYN 82 (154)
Q Consensus 4 ~~RPSIV~~a~~-EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~ 82 (154)
.+||+.|.+... .| + ...++.....|....+ ++...+.+.+|=++++++.++-+.. .-.+||
T Consensus 178 ilrp~~v~g~~~~~~--~-------~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~-----~g~~~~ 240 (342)
T 2x4g_A 178 IGIPGMVLGELDIGP--T-------TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGR-----IGERYL 240 (342)
T ss_dssp EEEECEEECSCCSSC--S-------TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSC-----TTCEEE
T ss_pred EEeCCceECCCCccc--c-------HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCC-----CCceEE
Confidence 578888877544 21 1 2223333334433223 4677899999999999888763211 135999
Q ss_pred eecCCCCcccHHHHHHHHHhcCc
Q psy3448 83 YVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 83 ~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
++++ . +|+.|+.+...+...
T Consensus 241 v~~~--~-~s~~e~~~~i~~~~g 260 (342)
T 2x4g_A 241 LTGH--N-LEMADLTRRIAELLG 260 (342)
T ss_dssp ECCE--E-EEHHHHHHHHHHHHT
T ss_pred EcCC--c-ccHHHHHHHHHHHhC
Confidence 9887 4 999999999887654
No 53
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=86.83 E-value=1.2 Score=34.91 Aligned_cols=55 Identities=5% Similarity=0.047 Sum_probs=41.9
Q ss_pred eeecCCCCccccchHHHHHH-HHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 42 TYQYDQDAVTEMVPVDMVVN-SVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 42 ~~~~~~~~~~D~VPvD~vvn-~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
..+++.+ ..+++.+|=+++ +++.++-. +. -.+||++++ .++|+.|+.+.+.+...
T Consensus 208 ~~~~~~~-~~~~i~~~Dva~~a~~~~~~~-----~~-g~~~~v~~~--~~~s~~e~~~~i~~~~g 263 (330)
T 2pzm_A 208 KCFCSDT-VRDFLDMSDFLAIADLSLQEG-----RP-TGVFNVSTG--EGHSIKEVFDVVLDYVG 263 (330)
T ss_dssp CCCEESC-EECEEEHHHHHHHHHHHTSTT-----CC-CEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred EEeCCCC-EecceeHHHHHHHHHHHHhhc-----CC-CCEEEeCCC--CCCCHHHHHHHHHHHhC
Confidence 4456666 789999999999 88877632 11 459999876 57999999999887543
No 54
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=86.69 E-value=1.2 Score=35.12 Aligned_cols=61 Identities=10% Similarity=-0.105 Sum_probs=46.0
Q ss_pred eeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 40 LHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 40 lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
...++++.+...++|.+|-++.+++.++-.... .-.+||++ +..+++|+.|+.+...+...
T Consensus 182 ~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~i~-g~~~~~s~~e~~~~~~~~~g 242 (346)
T 3i6i_A 182 FFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRT----LNKSVHFR-PSCNCLNINELASVWEKKIG 242 (346)
T ss_dssp CEEEETTSCCCEEEECHHHHHHHHHHHTTCGGG----TTEEEECC-CGGGEECHHHHHHHHHHHHT
T ss_pred eEEEccCCCceEEecCHHHHHHHHHHHHhCccc----cCeEEEEe-CCCCCCCHHHHHHHHHHHHC
Confidence 346788999999999999999998888743221 23578876 22368999999999987643
No 55
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=86.42 E-value=1.8 Score=32.92 Aligned_cols=82 Identities=7% Similarity=-0.023 Sum_probs=52.8
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+. ++ +++ ..++-....|..-...+ +...+.+.+|=++++++.++-.. .-.+||+
T Consensus 157 ~lR~~~v~G~-~~---~~~------~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~------~~~~~~i 218 (292)
T 1vl0_A 157 IVRTAWLYGD-GN---NFV------KTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK------NYGTFHC 218 (292)
T ss_dssp EEEECSEESS-SS---CHH------HHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT------CCEEEEC
T ss_pred EEeeeeeeCC-Cc---ChH------HHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC------CCcEEEe
Confidence 4788888764 21 111 12222222343323344 46779999999999988876432 2359999
Q ss_pred ecCCCCcccHHHHHHHHHhcCc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~ 105 (154)
+++ .++|+.|+.+...+...
T Consensus 219 ~~~--~~~s~~e~~~~i~~~~g 238 (292)
T 1vl0_A 219 TCK--GICSWYDFAVEIFRLTG 238 (292)
T ss_dssp CCB--SCEEHHHHHHHHHHHHC
T ss_pred cCC--CCccHHHHHHHHHHHhC
Confidence 876 57999999999887654
No 56
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=86.41 E-value=1.5 Score=34.92 Aligned_cols=56 Identities=13% Similarity=-0.023 Sum_probs=44.4
Q ss_pred eeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 42 TYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 42 ~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
...++.+...|++.||=++++++.++-. . ...+||++++ .++|+.|+.+.+.+...
T Consensus 244 ~~~g~~~~~~~~v~v~Dva~a~~~~~~~----~--~~~~~~i~~~--~~~s~~e~~~~i~~~~g 299 (381)
T 1n7h_A 244 LFLGNLQASRDWGFAGDYVEAMWLMLQQ----E--KPDDYVVATE--EGHTVEEFLDVSFGYLG 299 (381)
T ss_dssp EEESCTTCEEECEEHHHHHHHHHHHHTS----S--SCCEEEECCS--CEEEHHHHHHHHHHHTT
T ss_pred EEeCCCCceeeeEEHHHHHHHHHHHHhC----C--CCCeEEeeCC--CCCcHHHHHHHHHHHcC
Confidence 3567888889999999999998877621 1 2369999887 57999999999987654
No 57
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=86.19 E-value=1.6 Score=33.88 Aligned_cols=57 Identities=12% Similarity=-0.004 Sum_probs=44.1
Q ss_pred eeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCcc
Q psy3448 42 TYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 42 ~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
...++.+...|++.+|=++++++.++-+ . ...+||++++ .++++.|+.+.+.+...+
T Consensus 210 ~~~~~~~~~~~~~~v~Dva~a~~~~~~~----~--~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 266 (345)
T 2z1m_A 210 LVLGNLNAKRDWGYAPEYVEAMWLMMQQ----P--EPDDYVIATG--ETHTVREFVEKAAKIAGF 266 (345)
T ss_dssp EEESCTTCEECCEEHHHHHHHHHHHHTS----S--SCCCEEECCS--CCEEHHHHHHHHHHHTTC
T ss_pred eeeCCCCceeeeEEHHHHHHHHHHHHhC----C--CCceEEEeCC--CCccHHHHHHHHHHHhCC
Confidence 3567778888999999999998877621 1 1268999876 579999999999876543
No 58
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=84.78 E-value=2.1 Score=33.27 Aligned_cols=66 Identities=11% Similarity=-0.083 Sum_probs=44.7
Q ss_pred ccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 36 GTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 36 g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
..|....++++.+...+++.+|-++++++.++-...... ..-.+||+ ++ .++|+.|+.+.+.+...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~-~~~~~~ni-~g--~~~s~~e~~~~i~~~~g 283 (342)
T 2hrz_A 218 LVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKV-GPRRNLSM-PG--LSATVGEQIEALRKVAG 283 (342)
T ss_dssp HTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHH-CSCCEEEC-CC--EEEEHHHHHHHHHHHHC
T ss_pred hcCCCeeccCCCccceeeEehHHHHHHHHHHHhcccccc-CCccEEEc-CC--CCCCHHHHHHHHHHHcC
Confidence 345444456666777889999999999887764322100 12359999 44 46999999999887654
No 59
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=82.68 E-value=3.2 Score=30.99 Aligned_cols=48 Identities=4% Similarity=-0.016 Sum_probs=37.6
Q ss_pred ccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCcc
Q psy3448 50 VTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 50 ~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
..+.+.+|-++++++.++-.. ...+||+++ .++|+.|+.+...+...+
T Consensus 180 ~~~~~~~~dva~~i~~~~~~~------~~g~~~i~~---~~~s~~e~~~~~~~~~g~ 227 (273)
T 2ggs_A 180 YYSPISARKLASAILELLELR------KTGIIHVAG---ERISRFELALKIKEKFNL 227 (273)
T ss_dssp EECCCBHHHHHHHHHHHHHHT------CCEEEECCC---CCEEHHHHHHHHHHHTTC
T ss_pred CCCceEHHHHHHHHHHHHhcC------cCCeEEECC---CcccHHHHHHHHHHHhCC
Confidence 778999999999988877431 123899876 579999999999886643
No 60
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=82.52 E-value=4 Score=31.26 Aligned_cols=52 Identities=21% Similarity=0.123 Sum_probs=41.3
Q ss_pred cCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 45 YDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 45 ~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
++.+...|++-+|=++++++.++-.. -.+||++++ .++|+.|+.+...+...
T Consensus 209 ~~g~~~~~~i~v~Dva~a~~~~~~~~-------~~~~~i~~~--~~~s~~e~~~~i~~~~g 260 (311)
T 2p5y_A 209 GDEGCVRDYVYVGDVAEAHALALFSL-------EGIYNVGTG--EGHTTREVLMAVAEAAG 260 (311)
T ss_dssp TSCCCEECEEEHHHHHHHHHHHHHHC-------CEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred CCCCeEEeeEEHHHHHHHHHHHHhCC-------CCEEEeCCC--CCccHHHHHHHHHHHhC
Confidence 77778889999999999988776321 259999876 57999999999887653
No 61
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=76.68 E-value=5.5 Score=29.97 Aligned_cols=56 Identities=16% Similarity=0.154 Sum_probs=42.0
Q ss_pred ecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 44 QYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 44 ~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
..+.+...+.+.+|=++++++.++-... ..-.+||++++ .++|+.|+.+...+...
T Consensus 163 ~~~~~~~~~~i~~~Dva~~~~~~~~~~~----~~g~~~~i~~~--~~~s~~e~~~~i~~~~g 218 (287)
T 2jl1_A 163 TNAGSGIVNSVTRNELALAAATVLTEEG----HENKTYNLVSN--QPWTFDELAQILSEVSG 218 (287)
T ss_dssp ESCTTCCBCCBCHHHHHHHHHHHHTSSS----CTTEEEEECCS--SCBCHHHHHHHHHHHHS
T ss_pred ccCCCCccCccCHHHHHHHHHHHhcCCC----CCCcEEEecCC--CcCCHHHHHHHHHHHHC
Confidence 4456677899999999999887763211 12359999876 57999999999887654
No 62
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=76.14 E-value=4.6 Score=32.16 Aligned_cols=65 Identities=6% Similarity=-0.066 Sum_probs=45.2
Q ss_pred cCcee-eeecCCCCccccchH-HHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCcc
Q psy3448 37 TGVLH-TYQYDQDAVTEMVPV-DMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 37 ~G~lr-~~~~~~~~~~D~VPv-D~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
.|... .++++++...+.|.+ |=++++++.+.-+..... .-.+||+++ .++|+.|+.+...+...+
T Consensus 172 ~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~--~g~~~~l~~---~~~s~~e~~~~i~~~~G~ 238 (352)
T 1xgk_A 172 DGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKW--NGHRIALTF---ETLSPVQVCAAFSRALNR 238 (352)
T ss_dssp TSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHH--TTCEEEECS---EEECHHHHHHHHHHHHTS
T ss_pred CCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhh--CCeEEEEec---CCCCHHHHHHHHHHHHCC
Confidence 45432 346778888999999 888999887764321110 235999984 359999999998876543
No 63
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=73.69 E-value=8.9 Score=28.68 Aligned_cols=56 Identities=7% Similarity=-0.010 Sum_probs=42.5
Q ss_pred ecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 44 QYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 44 ~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
..+.+...+.+.+|=++++++.++-... ..-.+||++++ .++|+.|+.+...+...
T Consensus 159 ~~~~~~~~~~i~~~Dva~~~~~~~~~~~----~~g~~~~i~~~--~~~s~~e~~~~i~~~~g 214 (286)
T 2zcu_A 159 GAAGDGKIASATRADYAAAAARVISEAG----HEGKVYELAGD--SAWTLTQLAAELTKQSG 214 (286)
T ss_dssp ESCTTCCBCCBCHHHHHHHHHHHHHSSS----CTTCEEEECCS--SCBCHHHHHHHHHHHHS
T ss_pred ccCCCCccccccHHHHHHHHHHHhcCCC----CCCceEEEeCC--CcCCHHHHHHHHHHHHC
Confidence 4566788899999999999887763211 12359999876 47999999999887654
No 64
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=73.09 E-value=6 Score=29.90 Aligned_cols=56 Identities=11% Similarity=-0.046 Sum_probs=42.3
Q ss_pred eecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 43 YQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 43 ~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
...+.+...+.|.+|=++++++.++-.... .-.+||++ + .++|+.|+.+...+...
T Consensus 161 ~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~----~g~~~~~~-~--~~~s~~e~~~~~~~~~g 216 (289)
T 3e48_A 161 IYPAGDGRINYITRNDIARGVIAIIKNPDT----WGKRYLLS-G--YSYDMKELAAILSEASG 216 (289)
T ss_dssp CCCCTTCEEEEECHHHHHHHHHHHHHCGGG----TTCEEEEC-C--EEEEHHHHHHHHHHHHT
T ss_pred ecCCCCceeeeEEHHHHHHHHHHHHcCCCc----CCceEEeC-C--CcCCHHHHHHHHHHHHC
Confidence 345567888999999999998887643222 13599998 5 57999999999887644
No 65
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=73.08 E-value=6.4 Score=30.22 Aligned_cols=91 Identities=13% Similarity=0.007 Sum_probs=51.4
Q ss_pred ccccceEEcccCCCccceeccCCchhhhhhhhccCceeeeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEe
Q psy3448 4 SGLHILVVSTYREPVRGWIDNVYGPVGLMVGIGTGVLHTYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNY 83 (154)
Q Consensus 4 ~~RPSIV~~a~~EP~pGWiDn~~G~~gl~~~~g~G~lr~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~ 83 (154)
.+||+.|.+....|.... +....++.....|.-..+.++. ...|++.||=|+++++.++-.... .-..| +
T Consensus 202 ~~rp~~v~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~~----~g~~~-~ 271 (342)
T 1y1p_A 202 AVLPNYTIGTIFDPETQS----GSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQI----ERRRV-Y 271 (342)
T ss_dssp EEEESEEECCCSCTTTCC----CHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTTC----CSCEE-E
T ss_pred EEcCCceECCCCCCCCCC----ccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCccc----CCceE-E
Confidence 468888877665543210 1122222223333322223333 456899999999998877632111 11233 3
Q ss_pred ecCCCCcccHHHHHHHHHhcCcc
Q psy3448 84 VSSVQKPVTWNEFLQHNIKHGHH 106 (154)
Q Consensus 84 ~ss~~np~t~~~~~~~~~~~~~~ 106 (154)
+++ .++|+.|+.+.+.+...+
T Consensus 272 ~~g--~~~s~~e~~~~i~~~~~~ 292 (342)
T 1y1p_A 272 GTA--GTFDWNTVLATFRKLYPS 292 (342)
T ss_dssp ECC--EEECHHHHHHHHHHHCTT
T ss_pred EeC--CCCCHHHHHHHHHHHCCC
Confidence 444 479999999999887643
No 66
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=68.75 E-value=6.3 Score=30.05 Aligned_cols=59 Identities=12% Similarity=-0.104 Sum_probs=42.3
Q ss_pred eeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 42 TYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 42 ~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
.++++.+...+.|.+|=++++++.+.-+... .-.+|+++.+ .+++|+.|+.+...+...
T Consensus 183 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~g~-~~~~s~~e~~~~~~~~~g 241 (313)
T 1qyd_A 183 LIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT----LNKTMYIRPP-MNILSQKEVIQIWERLSE 241 (313)
T ss_dssp CCBTTSCSEEEEECHHHHHHHHHHHTTCGGG----SSSEEECCCG-GGEEEHHHHHHHHHHHHT
T ss_pred EEeCCCCceEEEEEHHHHHHHHHHHHhCccc----CCceEEEeCC-CCccCHHHHHHHHHHhcC
Confidence 4567888889999999999998877643211 1246665533 257999999999887654
No 67
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=59.57 E-value=6.8 Score=28.58 Aligned_cols=51 Identities=14% Similarity=0.130 Sum_probs=37.7
Q ss_pred cccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCC-CcccHHHHHHHHHhcCc
Q psy3448 51 TEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQ-KPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 51 ~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~-np~t~~~~~~~~~~~~~ 105 (154)
.+.+.+|-++++++.++-.... .-.+||++++.. .++|+.|+.+...+...
T Consensus 200 ~~~~~~~Dva~~~~~~~~~~~~----~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g 251 (253)
T 1xq6_A 200 TKTVPRADVAEVCIQALLFEEA----KNKAFDLGSKPEGTSTPTKDFKALFSQVTS 251 (253)
T ss_dssp CCEEEHHHHHHHHHHHTTCGGG----TTEEEEEEECCTTTSCCCCCHHHHHHTCCC
T ss_pred CcEEcHHHHHHHHHHHHcCccc----cCCEEEecCCCcCCCCCHHHHHHHHHHHhC
Confidence 3578999999998887743211 235999988753 57999999999887553
No 68
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=58.99 E-value=17 Score=27.61 Aligned_cols=47 Identities=26% Similarity=0.020 Sum_probs=33.6
Q ss_pred cccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 51 TEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 51 ~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
.|++.||=|+++++.++-. . .....|| +++ .++|+.|+.+.+.+...
T Consensus 222 ~~~i~v~Dva~a~~~~~~~-~----~~~g~~~-~~~--~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 222 FHMVHVDDVARAHIYLLEN-S----VPGGRYN-CSP--FIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp EEEEEHHHHHHHHHHHHHS-C----CCCEEEE-CCC--EEEEHHHHHHHHHHHCT
T ss_pred cCEEEHHHHHHHHHHHhhC-c----CCCCCEE-EcC--CCCCHHHHHHHHHHhCC
Confidence 3899999999998877622 1 1112588 444 57999999999887553
No 69
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=57.94 E-value=40 Score=27.12 Aligned_cols=54 Identities=9% Similarity=0.060 Sum_probs=40.5
Q ss_pred CCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCC-CcccHHHHHHHHHhcCc
Q psy3448 47 QDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQ-KPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 47 ~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~-np~t~~~~~~~~~~~~~ 105 (154)
++..-+++.+|=++.+++.++... ..-.+|+...+.. +++|+.|+.+.+.+..-
T Consensus 228 gd~~r~~v~v~D~a~~~~~a~~~~-----~~g~i~~l~~g~~~~~~s~~ela~~l~~~~G 282 (399)
T 3nzo_A 228 NDIKRYFVTPQESGELCLMSCIFG-----ENRDIFFPKLSEALHLISFADIAVKYLKQLG 282 (399)
T ss_dssp SSCEECEECHHHHHHHHHHHHHHC-----CTTEEEEECCCTTCCCEEHHHHHHHHHHHTT
T ss_pred CCCeeccCCHHHHHHHHHHHhccC-----CCCCEEEecCCCCCCcccHHHHHHHHHHHhC
Confidence 456778999999999988887431 1235898777654 55999999999988655
No 70
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=55.03 E-value=11 Score=29.70 Aligned_cols=50 Identities=10% Similarity=0.011 Sum_probs=37.4
Q ss_pred CCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhc
Q psy3448 46 DQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKH 103 (154)
Q Consensus 46 ~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~ 103 (154)
+++..-+++.+|=++++++.++-.. ..-.+||.++. ++++.|+.+...+.
T Consensus 211 ~~~~~r~~i~v~D~a~~v~~~l~~~-----~~g~~~~~~~~---~~s~~el~~~i~~~ 260 (344)
T 2gn4_A 211 DIRMTRFWITLDEGVSFVLKSLKRM-----HGGEIFVPKIP---SMKMTDLAKALAPN 260 (344)
T ss_dssp CTTCEEEEECHHHHHHHHHHHHHHC-----CSSCEEEECCC---EEEHHHHHHHHCTT
T ss_pred CCCeEEeeEEHHHHHHHHHHHHhhc-----cCCCEEecCCC---cEEHHHHHHHHHHh
Confidence 6677778999999999988876431 12358997543 58999999998754
No 71
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=54.49 E-value=21 Score=25.97 Aligned_cols=48 Identities=4% Similarity=-0.004 Sum_probs=34.9
Q ss_pred CCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHH
Q psy3448 46 DQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHN 100 (154)
Q Consensus 46 ~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~ 100 (154)
+.+...+.+.+|=++++++.++-.... .-.+||++++ +.++.|+.+..
T Consensus 187 ~~~~~~~~i~~~Dva~~~~~~~~~~~~----~g~~~~v~~~---~~~~~e~~~~i 234 (236)
T 3e8x_A 187 HFSEITRSITRHDVAKVIAELVDQQHT----IGKTFEVLNG---DTPIAKVVEQL 234 (236)
T ss_dssp SCSCCCCCEEHHHHHHHHHHHTTCGGG----TTEEEEEEEC---SEEHHHHHHTC
T ss_pred CCCcccCcEeHHHHHHHHHHHhcCccc----cCCeEEEeCC---CcCHHHHHHHh
Confidence 344467899999999998888743221 2359999887 48999987753
No 72
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=46.26 E-value=43 Score=23.87 Aligned_cols=45 Identities=11% Similarity=0.083 Sum_probs=33.7
Q ss_pred CCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHH
Q psy3448 48 DAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQH 99 (154)
Q Consensus 48 ~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~ 99 (154)
+...+.+.+|=++++++.++-.... .-.+||++++ +.++.|+.+.
T Consensus 166 ~~~~~~i~~~Dva~~i~~~l~~~~~----~g~~~~i~~g---~~~~~e~~~~ 210 (219)
T 3dqp_A 166 DEVSASNTIGDVADTIKELVMTDHS----IGKVISMHNG---KTAIKEALES 210 (219)
T ss_dssp SSCCCCEEHHHHHHHHHHHHTCGGG----TTEEEEEEEC---SEEHHHHHHT
T ss_pred CCcCCcccHHHHHHHHHHHHhCccc----cCcEEEeCCC---CccHHHHHHH
Confidence 6778999999999999888743221 2359999887 3788887665
No 73
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=44.71 E-value=16 Score=27.59 Aligned_cols=59 Identities=12% Similarity=-0.060 Sum_probs=42.4
Q ss_pred eeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 42 TYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 42 ~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
.++++++...+.+.+|=++++++.+.-+... .-.+|+++.+ .+++|+.|+.+...+...
T Consensus 178 ~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~g~-~~~~s~~e~~~~~~~~~g 236 (308)
T 1qyc_A 178 VILGDGNARVVFVKEEDIGTFTIKAVDDPRT----LNKTLYLRLP-ANTLSLNELVALWEKKID 236 (308)
T ss_dssp EEETTSCCEEEEECHHHHHHHHHTTSSCGGG----TTEEEECCCG-GGEEEHHHHHHHHHHHTT
T ss_pred EEecCCCceEEEecHHHHHHHHHHHHhCccc----cCeEEEEeCC-CCccCHHHHHHHHHHHhC
Confidence 4667888899999999999988876632211 1246666532 257999999999987654
No 74
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=42.71 E-value=30 Score=26.31 Aligned_cols=59 Identities=10% Similarity=-0.043 Sum_probs=42.4
Q ss_pred eeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 42 TYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 42 ~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
..+++.+...+++.+|=++++++.+.-+... .-.+|+++.+ ..++|+.|+.+...+...
T Consensus 178 ~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~g~~~~~~g~-~~~~t~~e~~~~~~~~~g 236 (321)
T 3c1o_A 178 VIYGTGETKFVLNYEEDIAKYTIKVACDPRC----CNRIVIYRPP-KNIISQNELISLWEAKSG 236 (321)
T ss_dssp EEETTSCCEEEEECHHHHHHHHHHHHHCGGG----TTEEEECCCG-GGEEEHHHHHHHHHHHHT
T ss_pred EEecCCCcceeEeeHHHHHHHHHHHHhCccc----cCeEEEEeCC-CCcccHHHHHHHHHHHcC
Confidence 3567888889999999999998877643211 1246766532 257999999999987654
No 75
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=40.40 E-value=26 Score=26.34 Aligned_cols=59 Identities=15% Similarity=-0.092 Sum_probs=41.4
Q ss_pred eeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 42 TYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 42 ~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
.++++.+...+++.+|=++++++.+.-+... .-.+|+++.+ .+++|+.|+.+...+...
T Consensus 177 ~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~~~-~~~~s~~e~~~~~~~~~g 235 (307)
T 2gas_A 177 VILGDGNVKGAYVTEADVGTFTIRAANDPNT----LNKAVHIRLP-KNYLTQNEVIALWEKKIG 235 (307)
T ss_dssp EEETTSCSEEEEECHHHHHHHHHHHHTCGGG----TTEEEECCCG-GGEEEHHHHHHHHHHHHT
T ss_pred EEecCCCcceEEeeHHHHHHHHHHHHcCccc----cCceEEEeCC-CCcCCHHHHHHHHHHHhC
Confidence 3567788889999999999988877643211 1235665432 257999999999987654
No 76
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=39.58 E-value=13 Score=26.47 Aligned_cols=37 Identities=5% Similarity=-0.177 Sum_probs=25.5
Q ss_pred ccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHH
Q psy3448 50 VTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWN 94 (154)
Q Consensus 50 ~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~ 94 (154)
..+.+.+|=++++++.++-+. ...+||++++ .+++++
T Consensus 176 ~~~~i~~~Dva~~~~~~~~~~------~~~~~~i~~~--~~~~~~ 212 (215)
T 2a35_A 176 KYHGIEACDLARALWRLALEE------GKGVRFVESD--ELRKLG 212 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC------CSEEEEEEHH--HHHHHH
T ss_pred CcCcEeHHHHHHHHHHHHhcC------CCCceEEcHH--HHHHhh
Confidence 568899999999988876221 2359999875 344443
No 77
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=32.67 E-value=39 Score=25.63 Aligned_cols=59 Identities=17% Similarity=-0.069 Sum_probs=41.6
Q ss_pred eeecCCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 42 TYQYDQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 42 ~~~~~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
.++++.+...+.+.+|=++++++.+.-+.. . .-.+|+++.+. +++|+.|+.+...+...
T Consensus 177 ~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~---~~~~~~~~g~~-~~~s~~e~~~~~~~~~g 235 (318)
T 2r6j_A 177 TVYGTGEAKFAMNYEQDIGLYTIKVATDPR-A---LNRVVIYRPST-NIITQLELISRWEKKIG 235 (318)
T ss_dssp EEETTSCCEEEEECHHHHHHHHHHHTTCGG-G---TTEEEECCCGG-GEEEHHHHHHHHHHHHT
T ss_pred EEecCCCceeeEeeHHHHHHHHHHHhcCcc-c---cCeEEEecCCC-CccCHHHHHHHHHHHhC
Confidence 456788889999999999998887764321 1 12466654322 47999999999887554
No 78
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=27.49 E-value=77 Score=23.69 Aligned_cols=54 Identities=15% Similarity=-0.007 Sum_probs=38.4
Q ss_pred CCCCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHHHHHHHHhcCc
Q psy3448 46 DQDAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNEFLQHNIKHGH 105 (154)
Q Consensus 46 ~~~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~~~~~~~~~~~ 105 (154)
.++...+.|.+|=++++++.+.-..... .-.+||+++ .++|+.|+.+...+...
T Consensus 181 ~~~~~~~~i~~~Dva~~~~~~l~~~~~~---~g~~~~~~g---~~~s~~e~~~~~~~~~g 234 (299)
T 2wm3_A 181 TGDVPMDGMSVSDLGPVVLSLLKMPEKY---VGQNIGLST---CRHTAEEYAALLTKHTR 234 (299)
T ss_dssp CTTSCEEEECGGGHHHHHHHHHHSHHHH---TTCEEECCS---EEECHHHHHHHHHHHHS
T ss_pred CCCCccceecHHHHHHHHHHHHcChhhh---CCeEEEeee---ccCCHHHHHHHHHHHHC
Confidence 3567788999999999887776432111 125899864 36999999999887543
No 79
>3ny5_A Serine/threonine-protein kinase B-RAF; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; HET: MSE; 1.99A {Homo sapiens} SCOP: d.15.1.0
Probab=27.25 E-value=13 Score=24.87 Aligned_cols=59 Identities=12% Similarity=0.196 Sum_probs=41.5
Q ss_pred ccCceeeeecCC-CCccccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHHH
Q psy3448 36 GTGVLHTYQYDQ-DAVTEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWNE 95 (154)
Q Consensus 36 g~G~lr~~~~~~-~~~~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~~ 95 (154)
-+|.+|.+.-|. ..+..+.|.=-+=++|..+.-.++-. ++...||.+.++...++.|+.
T Consensus 12 ~~~~irvhLPNqQrT~V~VrpG~tlrdaL~KaLk~R~L~-pe~C~Vy~~~~~~~~~I~Wdt 71 (96)
T 3ny5_A 12 QKPIVRVFLPNKQRTVVPARCGVTVRDSLKKALMMRGLI-PECCAVYRIQDGEKKPIGWDT 71 (96)
T ss_dssp SSCEEEEEETTTEEEEEECCTTCBHHHHHHHHHHTTTCC-GGGEEEEECC---CEEECTTB
T ss_pred hhCEEEEECCCCceEEEEecCCcCHHHHHHHHHHHcCCC-hHHeEEEEccCCCcCcccccc
Confidence 478888887665 77788888888888888887655543 234569999877778899954
No 80
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=21.16 E-value=70 Score=22.71 Aligned_cols=38 Identities=5% Similarity=-0.056 Sum_probs=26.6
Q ss_pred cccchHHHHHHHHHHHhhhhhhccCCCcCEEEeecCCCCcccHH
Q psy3448 51 TEMVPVDMVVNSVIATAWYTAKSNQQQIPIYNYVSSVQKPVTWN 94 (154)
Q Consensus 51 ~D~VPvD~vvn~li~aa~~~~~~~~~~~~VY~~~ss~~np~t~~ 94 (154)
.+.|.+|=++++++.++-+-. ..-.+||+++.. |.+|+
T Consensus 189 ~~~i~~~Dva~ai~~~l~~~~----~~g~~~~~~~~~--~~~~~ 226 (227)
T 3dhn_A 189 NSHISVEDYAAAMIDELEHPK----HHQERFTIGYLE--HHHHH 226 (227)
T ss_dssp CCEEEHHHHHHHHHHHHHSCC----CCSEEEEEECCS--CCC--
T ss_pred CcEEeHHHHHHHHHHHHhCcc----ccCcEEEEEeeh--hcccC
Confidence 689999999999888873221 134699999884 55664
Done!